Citrus Sinensis ID: 004025
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 778 | 2.2.26 [Sep-21-2011] | |||||||
| Q55GS2 | 813 | Probable inactive serine/ | yes | no | 0.647 | 0.619 | 0.374 | 1e-102 | |
| Q96KG9 | 808 | N-terminal kinase-like pr | yes | no | 0.649 | 0.625 | 0.382 | 1e-99 | |
| A6QLH6 | 807 | N-terminal kinase-like pr | yes | no | 0.645 | 0.622 | 0.380 | 6e-98 | |
| Q561M0 | 827 | N-terminal kinase-like pr | N/A | no | 0.695 | 0.654 | 0.360 | 5e-97 | |
| Q28FH2 | 827 | N-terminal kinase-like pr | yes | no | 0.785 | 0.738 | 0.340 | 1e-96 | |
| Q5M9F8 | 807 | N-terminal kinase-like pr | yes | no | 0.645 | 0.622 | 0.384 | 3e-96 | |
| Q9EQC5 | 806 | N-terminal kinase-like pr | yes | no | 0.646 | 0.624 | 0.372 | 5e-96 | |
| O13733 | 637 | Protein kinase domain-con | yes | no | 0.645 | 0.788 | 0.259 | 9e-32 | |
| Q9DBQ7 | 735 | Protein-associating with | no | no | 0.466 | 0.493 | 0.282 | 3e-30 | |
| Q8IZE3 | 742 | Protein-associating with | no | no | 0.569 | 0.597 | 0.262 | 1e-28 |
| >sp|Q55GS2|SCY1_DICDI Probable inactive serine/threonine-protein kinase scy1 OS=Dictyostelium discoideum GN=scy1 PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 374 bits (961), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/561 (37%), Positives = 321/561 (57%), Gaps = 57/561 (10%)
Query: 4 FLKGVVGGSGAGVKDLPYNIGDPYPSAWGS--WSHFQGTSKDDGSPVSIFSISGTNAQDG 61
++ ++G + + PYNIG G W+ GT K+DGS VSIFS
Sbjct: 2 YIFKLMGQNLTASQSFPYNIGPIVTGYVGKSIWTLHSGTKKEDGSAVSIFSFD-IKKNPS 60
Query: 62 HLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGL 121
L A+NG KR +T RHPN+L +L D T+ IYIVTEP+ L E ++++
Sbjct: 61 KLEVAKNGFKRAKTTRHPNVLKYL--------DGLETETNIYIVTEPIQLLDELLEDI-- 110
Query: 122 EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181
+ +WGL Q + +SFLNN C L HGN+ SS+ V + DW++ D +S+
Sbjct: 111 --RNFENAISWGLYQ--EGLSFLNNKCNLTHGNIQSSSIFVNKGGDWQIGGLDFVSDVKD 166
Query: 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLS 241
N N + + L+ +YK E+ KS W +++SP +SIDSW LGCL+YE ++G ++
Sbjct: 167 IN---NSILRNHNDLIPNKYKSPEIMKSQWQQIQQSPSYSIDSWMLGCLMYECYNGT-MT 222
Query: 242 KTEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQNKLVDTIHF 301
K E+++N IPK L YQ+ + RLN K +E + YFQN V+T+ F
Sbjct: 223 KAEDIKNLDQIPKQLHQAYQKSFAVKTESRLNPQKFLE--------SPYFQNVFVETLVF 274
Query: 302 MEILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMG 361
+E + LKD+ EK+ FF+KL E++P I K+LP L +A + G L+ LLK+G
Sbjct: 275 LENITLKDTFEKEQFFKKLDQHIEKIPINICKFKILPHLVTAFDLGPVNPRLLSTLLKIG 334
Query: 362 SWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFA 421
S LSTEE++ +++P++VK FA +DRA+R+ LL++++ Y Q + +++Q++PHV GF
Sbjct: 335 SNLSTEEYNSRIVPSVVKWFACDDRALRINLLENLEHYIQHLNEATINDQIFPHVVNGFN 394
Query: 422 DTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHL 481
D L+E+T+KSML+ APKL ++T+ LLKY + LQ D++ +R NTTI LG I ++
Sbjct: 395 DNPT-LKELTIKSMLLFAPKLQEKTMI-ILLKYFAALQKDQQAGVRCNTTICLGRITEYM 452
Query: 482 NEGTRKRVLINAFTVRALRDTFSPARGAA-------------------------KILSYL 516
NE T+KRVLI AF+ AL+D F P++ AA ++L
Sbjct: 453 NEATKKRVLIPAFST-ALKDPFVPSQNAAIQAFMFTISNYSLEELATRVIPEVSRMLISP 511
Query: 517 NCDVRSKAFQAVDQFLQIVKQ 537
+R+ AF A++ FLQ +++
Sbjct: 512 EKSIRTSAFTAINMFLQKIEK 532
|
Dictyostelium discoideum (taxid: 44689) |
| >sp|Q96KG9|NTKL_HUMAN N-terminal kinase-like protein OS=Homo sapiens GN=SCYL1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 364 bits (935), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 212/554 (38%), Positives = 308/554 (55%), Gaps = 49/554 (8%)
Query: 16 VKDLPYNIGDPYPSAW--GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRL 73
V+D P+ + P G W+ +G K GSPVSIF + A+ KR
Sbjct: 9 VRDFPFELIPEPPEGGLPGPWALHRGRKKATGSPVSIFVYDVKPGAEEQTQVAKAAFKRF 68
Query: 74 RTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWG 133
+T+RHPNILA+ ID T+ +++VTE V PL +K G ++ +WG
Sbjct: 69 KTLRHPNILAY--------IDGLETEKCLHVVTEAVTPLGIYLKARVEAGGLKELEISWG 120
Query: 134 LNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQY 193
L+QI KA+SFL NDC L+H NVC+++V V + +WKL D + GN GP +
Sbjct: 121 LHQIVKALSFLVNDCSLIHNNVCMAAVFVDRAGEWKLGGLDYMYSAQGN---GGGPPRKG 177
Query: 194 AWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASIP 253
+ QY P ELA S VR+ WS D W LGCLI+E+F+G L + LRN IP
Sbjct: 178 IPEL-EQYDPPELADSSGRVVREK--WSADMWRLGCLIWEVFNGP-LPRAAALRNPGKIP 233
Query: 254 KSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQNKLVDTIHFMEILNLKDSVEK 313
K+L+P Y L+ + P R N ++ ++N + N+ V+T F+E + +K+ EK
Sbjct: 234 KTLVPHYCELVGANPKVRPNPARFLQNCRAP---GGFMSNRFVETNLFLEEIQIKEPAEK 290
Query: 314 DTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSTEEFSVKV 373
FF++L + P K+LP L +A EFG+A A LT L K+G +LS EE+ K+
Sbjct: 291 QKFFQELSKSLDAFPEDFCRHKVLPQLLTAFEFGNAGAVVLTPLFKVGKFLSAEEYQQKI 350
Query: 374 LPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLK 433
+P +VK+F+S DRA+R+ LLQ ++Q+ Q V+ Q++PHV GF DT+ +RE T+K
Sbjct: 351 IPVVVKMFSSTDRAMRIRLLQQMEQFIQYLDEPTVNTQIFPHVVHGFLDTNPAIREQTVK 410
Query: 434 SMLVLAPKLSQRTISGSLLKYLSKLQV-DEEPAIRTNTTILLGNIASHLNEGTRKRVLIN 492
SML+LAPKL++ ++ L+K+ ++LQ DE+ IR NTT+ LG I S+L+ TR RVL +
Sbjct: 411 SMLLLAPKLNEANLNVELMKHFARLQAKDEQGPIRCNTTVCLGKIGSYLSASTRHRVLTS 470
Query: 493 AFTVRALRDTFSPAR------------------GAAKILSYLNC--------DVRSKAFQ 526
AF+ RA RD F+P+R A KIL L C VR +AF+
Sbjct: 471 AFS-RATRDPFAPSRVAGVLGFAATHNLYSMNDCAQKILPVL-CGLTVDPEKSVRDQAFK 528
Query: 527 AVDQFLQIVKQYHE 540
A+ FL ++ E
Sbjct: 529 AIRSFLSKLESVSE 542
|
Isoform 6 acts as transcriptional activator. It binds to three different types of GC-rich DNA binding sites (box-A, -B and -C) in the beta-polymerase promoter region. It also binds to the TERT promoter region. Homo sapiens (taxid: 9606) |
| >sp|A6QLH6|NTKL_BOVIN N-terminal kinase-like protein OS=Bos taurus GN=SCYL1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 358 bits (920), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 212/557 (38%), Positives = 305/557 (54%), Gaps = 55/557 (9%)
Query: 16 VKDLPYNIGDPYPSAWGS--WSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRL 73
V+D P+ + P W +G K GSPVSIF + A+ KRL
Sbjct: 9 VRDFPFELSPEPPEGSPPGPWVLHRGRKKATGSPVSIFVYDVKPVAEEQTQVAKAAFKRL 68
Query: 74 RTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWG 133
+T+RHPNILA+ ID T +++VTE V PL +K G ++ +WG
Sbjct: 69 KTLRHPNILAY--------IDGLETDKCLHVVTEAVTPLGVYLKARAEAGGLKELELSWG 120
Query: 134 LNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEA---ANGPM 190
L+QI KA+SFL NDC L+H NVC+++V V + +WKL D + GN P
Sbjct: 121 LHQIVKALSFLVNDCSLIHNNVCMAAVFVDRAGEWKLGGLDYMYSAQGNGGGPPRKGIPE 180
Query: 191 LQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTA 250
L+ QY P ELA AVR+ WS D W LGCLI+E+F+G L + LRN
Sbjct: 181 LE-------QYDPPELADGSGRAVREK--WSADMWRLGCLIWEVFNGP-LPRAAALRNPG 230
Query: 251 SIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQNKLVDTIHFMEILNLKDS 310
IPKSL+P Y L+ + P R N ++ ++N + N+ V+T F+E + +K+
Sbjct: 231 KIPKSLVPHYCELVGANPKVRPNPARFLQNCRAP---GGFMNNRFVETNLFLEEIQIKEP 287
Query: 311 VEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSTEEFS 370
EK FF++L + P K+LP L +A EFGSA A LT L K+G +L+ EE+
Sbjct: 288 AEKQKFFQELSKSLDSFPEDFCRHKVLPQLLTAFEFGSAGAVVLTPLFKVGKFLNAEEYQ 347
Query: 371 VKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREM 430
K++P +VK+F+S DRA+R+ LLQ ++Q+ Q V+ Q++PHV GF DT+ +RE
Sbjct: 348 QKIIPVVVKMFSSTDRAMRIRLLQQMEQFIQYLDEPTVNTQIFPHVVHGFLDTNPAIREQ 407
Query: 431 TLKSMLVLAPKLSQRTISGSLLKYLSKLQV-DEEPAIRTNTTILLGNIASHLNEGTRKRV 489
T+KSML+LAPKL++ ++ L+K+ ++LQ DE+ IR NTT+ LG I S+L+ TR RV
Sbjct: 408 TVKSMLLLAPKLNETNLNVELMKHFARLQAKDEQGPIRCNTTVCLGKIGSYLSASTRHRV 467
Query: 490 LINAFTVRALRDTFSPAR------------------GAAKILSYLNC--------DVRSK 523
L +AF+ RA +D F+P+R A KIL L C VR +
Sbjct: 468 LTSAFS-RATKDPFAPSRVAGVLGFAATHNLYSMNDCAHKILPVL-CGLTVDPEKSVRDQ 525
Query: 524 AFQAVDQFLQIVKQYHE 540
AF+A+ FL ++ E
Sbjct: 526 AFKAIRSFLSKLESVSE 542
|
Regulates COPI-mediated retrograde traffic. Has no detectable kinase activity in vitro. Bos taurus (taxid: 9913) |
| >sp|Q561M0|NTKL_XENLA N-terminal kinase-like protein OS=Xenopus laevis GN=scyl1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 355 bits (912), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 223/619 (36%), Positives = 329/619 (53%), Gaps = 78/619 (12%)
Query: 17 KDLPYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV 76
+D PY++ G W +G K G PVS+F+ + AA+ KR++T+
Sbjct: 10 RDFPYDVTGEREELPGGWGIQKGKKKTGGDPVSVFTYEIRPGAEEQTQAAKTASKRIKTL 69
Query: 77 RHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQ 136
+HPNIL++ +D T +YIVTEPV PL +K G + +WGL+Q
Sbjct: 70 KHPNILSY--------VDGLETDKCLYIVTEPVTPLETYVKLRTDSGGVSELEISWGLHQ 121
Query: 137 IAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEA-ANGPMLQYAW 195
I KA+SFL ND L+H NVC+S+V V + +WKL D + N A G ++
Sbjct: 122 IVKALSFLVNDGNLIHNNVCMSAVFVDRAGEWKLGGLDYMYTAGAENTAPRKGVEME--- 178
Query: 196 LVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASIPKS 255
+Y P E K+D + K WS D W LGCLI+E+F+G L + LR+ I KS
Sbjct: 179 ----KYNPPE--KTDRSKTSKEK-WSADMWCLGCLIWEVFNGP-LPRPTALRSLGKIAKS 230
Query: 256 LLPDYQRLLSSMPSRRLNSSKLIEN--SVGDFWMTEYFQNKLVDTIHFMEILNLKDSVEK 313
L+P Y L+ + P R N S+ ++N S G F F N V+T F+E + +KD EK
Sbjct: 231 LVPHYCELVGANPKIRPNPSRFLQNCRSPGGF-----FCNSFVETNLFLEEIQIKDPAEK 285
Query: 314 DTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSTEEFSVKV 373
TFF +L + P K+LP L +A EFGSA A L L K+G +L+ +E+ K+
Sbjct: 286 QTFFEQLSENLDSFPEDFCRHKILPQLLTAFEFGSAGAVVLPPLFKIGKFLNADEYQQKI 345
Query: 374 LPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLK 433
+P +VK+F+S DRA+R+ LLQ ++ + Q + V+ Q++PHV GF DT+ +RE T+K
Sbjct: 346 IPVVVKMFSSTDRAMRIRLLQQMENFIQYLNEPTVNAQIFPHVVHGFMDTNPAIREQTVK 405
Query: 434 SMLVLAPKLSQRTISGSLLKYLSKLQV-DEEPAIRTNTTILLGNIASHLNEGTRKRVLIN 492
SML+LAPKL++ ++ L+K+ ++LQ D++ IR NTT+ LG IA +LN TR+RVLI+
Sbjct: 406 SMLLLAPKLNENNLNMDLMKHFARLQARDDQGPIRCNTTVCLGKIAPYLNPATRQRVLIS 465
Query: 493 AFTVRALRDTFSPARGAA--------KILSYLNC-----------------DVRSKAFQA 527
AF+ RA +D F+P+R A S +C +VR +AF+
Sbjct: 466 AFS-RATKDPFAPSRAAGVLGFAATHNFYSMADCAGKVLPVLCGVTLDPEKNVREQAFKT 524
Query: 528 VDQFLQIVKQYHEKTNTGDATGASSVGISSMPGNAS---LLGWA------MSSLTLK--- 575
+ FL + +T +GD + + + +AS + GWA +SSLT K
Sbjct: 525 IRSFLDKL-----ETVSGDPSQLAELEKDVHTASASPSVVGGWAGWAVTGVSSLTSKFIR 579
Query: 576 -------GKPSEQAPVASA 587
PSE AP A
Sbjct: 580 TGGGAQDASPSEGAPAPPA 598
|
Xenopus laevis (taxid: 8355) |
| >sp|Q28FH2|NTKL_XENTR N-terminal kinase-like protein OS=Xenopus tropicalis GN=scyl1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 355 bits (910), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 234/687 (34%), Positives = 358/687 (52%), Gaps = 76/687 (11%)
Query: 17 KDLPYNIG---DPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRL 73
+D PY++ + P+ WG +G K G VS+F+ + AA+ +KR+
Sbjct: 10 RDFPYDVTGEREELPAGWGVQ---KGKKKTGGDAVSVFTYEIRPGAEEQTQAAKTALKRI 66
Query: 74 RTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWG 133
+T++HPNIL++ +D T +YIVTEPV PL +K G + +WG
Sbjct: 67 KTLKHPNILSY--------VDGLETDKCLYIVTEPVTPLGTYVKLRTDSGGVSELEISWG 118
Query: 134 LNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAA-NGPMLQ 192
L+QI KA+SFL ND L+H NVC+S+V V + +WKL D + + A G ++
Sbjct: 119 LHQIVKALSFLVNDGNLIHNNVCMSAVFVDRAGEWKLGGLDYMYTAGAEDTAPLKGIEME 178
Query: 193 YAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASI 252
+Y P E K+D + K WS D W LGCLI+E+F+G L + LR+ I
Sbjct: 179 -------KYNPPE--KTDRSKTSKEK-WSADMWCLGCLIWEVFNGP-LPRPTALRSLGKI 227
Query: 253 PKSLLPDYQRLLSSMPSRRLNSSKLIEN--SVGDFWMTEYFQNKLVDTIHFMEILNLKDS 310
PKSL+P Y L+ + P R N ++ ++N S G F F N V+T F+E + +KD
Sbjct: 228 PKSLVPHYCELVGANPKVRPNPARFLQNCRSPGGF-----FCNSFVETNLFLEEIQIKDP 282
Query: 311 VEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSTEEFS 370
EK TFF +L + P K+LP L +A EFGSA A L L K+G +L+ +E+
Sbjct: 283 AEKQTFFEQLSENLDSFPEDFCRHKILPQLLTAFEFGSAGAVVLPPLFKIGKFLNADEYQ 342
Query: 371 VKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREM 430
K++P +VK+F+S DRA+R+ LLQ ++ + Q + V+ Q++PHV GF DT+ +RE
Sbjct: 343 QKIIPVVVKMFSSTDRAMRIRLLQQMENFIQYLNEPTVNAQIFPHVVHGFMDTNPAIREQ 402
Query: 431 TLKSMLVLAPKLSQRTISGSLLKYLSKLQV-DEEPAIRTNTTILLGNIASHLNEGTRKRV 489
T+KSML+LAPKL++ ++ L+K+ ++LQ D++ IR NTT+ LG IA +LN TR+RV
Sbjct: 403 TVKSMLLLAPKLNENNLNMELMKHFARLQARDDQGPIRCNTTVCLGKIAPYLNPATRQRV 462
Query: 490 LINAFTVRALRDTFSPARGAA--------KILSYLNC-----------------DVRSKA 524
LI+AF+ RA +D FSP+R A S +C +VR +A
Sbjct: 463 LISAFS-RATKDPFSPSRAAGVLGFAATHNFYSLTDCAGKVLPVLCGVTVDPEKNVREQA 521
Query: 525 FQAVDQFLQIVKQYHEK----TNTGDATGASSVGISSMPGNASLLGWA---MSSLT---L 574
F+A+ FL ++ E +SV S + G A GWA +SSLT +
Sbjct: 522 FKAIRSFLDKLETVSEDPSQLAELEKDVHTASVSPSVVGGWA---GWAVTGVSSLTSKFI 578
Query: 575 KGKPSEQAPVASANSITPLTSTTSSTSSVMENAINAPLRHVSSGTDFADQPAGPAPPSPT 634
+ Q AS + P T++ +S ++ P ++ T + + AP +
Sbjct: 579 RTGGGAQDAAASEGASAPSTASEASKPDTAPSSSAPPAAASTAPTSYEPEEEKGAPDNSL 638
Query: 635 ---STDGWGEIENGLHEDHDSDKDGWD 658
+ WG +E+ ++ D WD
Sbjct: 639 DRWDDEDWGSLEDAEQNRGQTENDDWD 665
|
Xenopus tropicalis (taxid: 8364) |
| >sp|Q5M9F8|NTKL_RAT N-terminal kinase-like protein OS=Rattus norvegicus GN=Scyl1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 353 bits (906), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 214/557 (38%), Positives = 306/557 (54%), Gaps = 55/557 (9%)
Query: 16 VKDLPY--NIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRL 73
V+D P+ N P G W +G K GS VSIF + A+ KRL
Sbjct: 9 VRDFPFELNPEPPEGGPPGPWVLHRGRKKATGSAVSIFVYDVKPGAEEQTQVAKAAFKRL 68
Query: 74 RTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWG 133
+T+RHPNILA+ ID T+ ++IVTE V PL +K G +++ +WG
Sbjct: 69 KTLRHPNILAY--------IDGLETEKCLHIVTEAVTPLGTYLKARAEAGGLKEQELSWG 120
Query: 134 LNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANG---PM 190
L+QI KA+SFL NDC L+H NVC+++V V + +WKL D + GN P
Sbjct: 121 LHQIVKALSFLVNDCNLIHNNVCMAAVFVDKAGEWKLGGLDYMYSAQGNGGGPPNKGIPE 180
Query: 191 LQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTA 250
L+ QY P ELA S AV++ WS D W LGCLI+E+F+G L + LRN
Sbjct: 181 LE-------QYDPPELADSSSRAVKEK--WSADMWRLGCLIWEVFNG-SLPRATALRNPG 230
Query: 251 SIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQNKLVDTIHFMEILNLKDS 310
IPKSL+ Y L+ + P R N ++ ++N + N+ V+T F+E + +K+
Sbjct: 231 KIPKSLVTHYCELVGANPKVRPNPARFLQNCRAP---GGFMSNRFVETNLFLEEIQIKEP 287
Query: 311 VEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSTEEFS 370
EK FF++L + P K+LP L +A EFG+A A LT L K+G +LS EE+
Sbjct: 288 AEKQKFFQELSKSLDSFPEDFCRHKVLPQLLTAFEFGNAGAVVLTPLFKVGKFLSAEEYQ 347
Query: 371 VKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREM 430
K++P +VK+F+S DRA+RV LLQ ++Q+ Q V+ Q++PHV GF DT+ +RE
Sbjct: 348 QKIIPVVVKMFSSTDRAMRVRLLQQMEQFIQYLDEPTVNTQIFPHVTHGFLDTNPAIREQ 407
Query: 431 TLKSMLVLAPKLSQRTISGSLLKYLSKLQV-DEEPAIRTNTTILLGNIASHLNEGTRKRV 489
T+KSML+LAPKLS+ ++ LLK+ ++LQ D++ IR NTT+ LG I S+L+ TR RV
Sbjct: 408 TVKSMLLLAPKLSETNLNVELLKHFARLQAKDDQGPIRCNTTVCLGKIGSYLSASTRHRV 467
Query: 490 LINAFTVRALRDTFSPAR------------------GAAKILSYLNC--------DVRSK 523
L +AF+ RA +D F+P+R A KIL L C VR +
Sbjct: 468 LTSAFS-RATKDPFAPSRVAGVLGFAATHNLYSMDDCAHKILPVL-CGLTVDPEKSVRDQ 525
Query: 524 AFQAVDQFLQIVKQYHE 540
AF+ + FL ++ E
Sbjct: 526 AFKTIRSFLSKLESVSE 542
|
Regulates COPI-mediated retrograde traffic. Has no detectable kinase activity in vitro. Rattus norvegicus (taxid: 10116) |
| >sp|Q9EQC5|NTKL_MOUSE N-terminal kinase-like protein OS=Mus musculus GN=Scyl1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 352 bits (904), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 207/556 (37%), Positives = 303/556 (54%), Gaps = 53/556 (9%)
Query: 16 VKDLPYNIGDPYPSAWGS--WSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRL 73
V+D P+ + P W +G K GS VSIF + A+ KRL
Sbjct: 9 VRDFPFELSPEPPEGGPPGPWILHRGRKKATGSAVSIFVYDVKPGAEEQTQVAKAAFKRL 68
Query: 74 RTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWG 133
+T+RHPNILA+ ID T+ ++IVTE V PL +K G +++ +WG
Sbjct: 69 KTLRHPNILAY--------IDGLETEKCLHIVTEAVTPLGTYLKARAEAGGLKEQELSWG 120
Query: 134 LNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNN---EAANGPM 190
L+QI KA+SFL NDC L+H NVC+++V V + +WKL D + GN + P
Sbjct: 121 LHQIVKALSFLVNDCNLIHNNVCMAAVFVDRAGEWKLGGLDYMYSAQGNGGGPPSKGIPE 180
Query: 191 LQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTA 250
L+ QY P ELA S AVR+ WS D W LGCLI+E+F+G L + LRN
Sbjct: 181 LE-------QYDPPELADSSSRAVREK--WSADMWRLGCLIWEVFNG-SLPRAAALRNPG 230
Query: 251 SIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQNKLVDTIHFMEILNLKDS 310
IPKSL+ Y L+ + P R N ++ ++N + N+ V+T F+E + +K+
Sbjct: 231 KIPKSLVTHYCELVGANPKVRPNPARFLQNCRAP---GGFMSNRFVETNLFLEEIQIKEP 287
Query: 311 VEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSTEEFS 370
EK FF++L + P K+LP L +A EFG+A A LT L K+G L EE+
Sbjct: 288 AEKQKFFQELSKSLDSFPEDFCRHKVLPQLLTAFEFGNAGAVVLTPLFKVGKSLRAEEYQ 347
Query: 371 VKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREM 430
K++P +VK+F+S DRA+R+ LLQ ++Q+ Q V+ Q++PHV GF DT+ +RE
Sbjct: 348 EKIIPVVVKMFSSTDRAMRIRLLQQMEQFIQYLDEPTVNTQIFPHVTHGFLDTNPAIREQ 407
Query: 431 TLKSMLVLAPKLSQRTISGSLLKYLSKLQV-DEEPAIRTNTTILLGNIASHLNEGTRKRV 489
T+KSML+LAPKL++ ++ L+K+ ++LQ D++ IR NTT+ LG I S+L+ TR RV
Sbjct: 408 TVKSMLLLAPKLNEANLNVELMKHFARLQAKDDQGPIRCNTTVCLGKIGSYLSASTRHRV 467
Query: 490 LINAFTVRALRDTFSPARGAA---------------------KILSYLNCD----VRSKA 524
L +AF+ RA +D F+P+R A +L L D VR +A
Sbjct: 468 LTSAFS-RATKDPFAPSRVAGVLGFAATHNLYSMDDCAHKILPVLCGLTVDPEKSVRDQA 526
Query: 525 FQAVDQFLQIVKQYHE 540
F+ + FL ++ E
Sbjct: 527 FKTIRSFLSKLESVSE 542
|
Regulates COPI-mediated retrograde traffic. Has no detectable kinase activity in vitro. Mus musculus (taxid: 10090) |
| >sp|O13733|PPK3_SCHPO Protein kinase domain-containing protein ppk3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ppk3 PE=4 SV=1 | Back alignment and function description |
|---|
Score = 139 bits (350), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 150/578 (25%), Positives = 264/578 (45%), Gaps = 76/578 (13%)
Query: 4 FLKGVVGGSGAGVKDLPYNIGDPYP-SAWGSWSHFQGTSKDDGSPVSIFSISGTNAQDGH 62
F+K PY++ + P S+ W+ G+ ++ P S+FSIS + +
Sbjct: 3 FIKSAASFIAKAGSQFPYDLNEKIPLSSNSVWTLQTGSIRESAQPCSVFSISLSTHPEWA 62
Query: 63 LAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLE 122
A R + ++T+RHP I+ +L + + +ST + YI TE V P++ ++ EL
Sbjct: 63 ELADR-ACETMKTLRHPCIIKYLSTYK------SSTHL--YIATETVRPVTTELNELS-- 111
Query: 123 GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGN 182
E +GL +++ A+SFLN D +VHGN+ +SSV + +W + F + +
Sbjct: 112 ----AEIKTYGLWRVSAALSFLN-DKNIVHGNLQMSSVYLNSADEWIIGDFFLAGDSPQF 166
Query: 183 NEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSK 242
+ + +L ++ LV P E+ S + + +DS+ LG I L++G
Sbjct: 167 IKDNHDKILNWSRLV-----PFEIQSS---TLNSASFIYLDSYELGKFISHLYNGT---- 214
Query: 243 TEELRNTASIPKSLLPDYQRLLSSMPSRRLNSS---KLIENSVGDFWMTEYFQNKLVDTI 299
+L +IP ++ ++LL+ ++L +S KL E G +F+ L+
Sbjct: 215 PGDLSQRGNIPANIFVSAKKLLNVEGKQKLLASEFLKLGERPGG------FFRTHLITLY 268
Query: 300 HFMEILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLK 359
+ + + + ++ + L + E +P+ + K +L +L L + + + L K
Sbjct: 269 ELLSEVRINEEEDRVKLKQLLSSKLEVIPKNYIQKVVLNILFLLLSIDTHS-DVVELLFK 327
Query: 360 MGSWLS-----TEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYP 414
+ ++F V +L L IR LL I + ++ +
Sbjct: 328 CAQIVKGRPDIEKDFGVPLL----SLLKQQSVPIRGLLLSGIINNPDVLPKNIYEDTSFS 383
Query: 415 HVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILL 474
A S L+E + ++APKLS++T++ LL+ L+ +Q D+ P +RTN+TI L
Sbjct: 384 VFANLVRSNSPTLKEHAIVVFSIIAPKLSKKTLNNELLRSLAVVQNDQHPTLRTNSTICL 443
Query: 475 GNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAA-KIL----SYLNC-DVRSKAFQAV 528
G IA +L+ RK VL A + R+L+D F PAR AA K+L +Y + DV K F +V
Sbjct: 444 GKIAEYLDASVRKPVLAAALS-RSLKDPFVPAREAALKVLLSVQNYFDTKDVAIKLFPSV 502
Query: 529 -------------------DQFLQIVKQYH--EKTNTG 545
DQFL +K ++ EK N
Sbjct: 503 VPLLIDENEGIRRTAEDVTDQFLSRIKNFNLGEKENVS 540
|
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
| >sp|Q9DBQ7|PACE1_MOUSE Protein-associating with the carboxyl-terminal domain of ezrin OS=Mus musculus GN=Scyl3 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 120/425 (28%), Positives = 198/425 (46%), Gaps = 62/425 (14%)
Query: 44 DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103
DG S+F N + AA K L+T+RHP +L FL T ++A I+
Sbjct: 33 DGKCASVFVYKRENEDKVNKAA-----KHLKTLRHPCLLRFLSCT----VEADG----IH 79
Query: 104 IVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT 163
+VTE V PL E+ LE E A G+ I A+ FL++ L H NVCLSSV V+
Sbjct: 80 LVTERVQPL-----EVALETLSPAEVCA-GIYDILLALIFLHDRGHLTHNNVCLSSVFVS 133
Query: 164 QTLDWKLHAFDVLS-------EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRK 216
+ WKL + + EF N ++ P A P E++ +++ + +
Sbjct: 134 EDGHWKLGGMETVCQVPQATPEFLRNIQSVRDP---------ASIPPEEMSP-EFSGLPE 183
Query: 217 SPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASIPKSLLPD-YQRLLSSMPSRRLNSS 275
S + D++ G L+ L E++ +A + S L + LL+ MP R S
Sbjct: 184 SHGHARDAYAFGALVDSLLPIF----NEQV--SADVLSSFLQILHSALLNPMPECRPALS 237
Query: 276 KLIENSVGDFWMTEYFQNKLVDTIHFMEILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKK 335
L+ + ++F+N ++ ++F++ L LK EK FF+ L + L +++ +
Sbjct: 238 TLLSH--------DFFRNDFLEVVNFLKSLTLKSEDEKTEFFKFLLDRVSCLSEELIASR 289
Query: 336 LLPLLASALEFGSAAA-----PALTALLKMGS------WLSTEEFSVKVLPTIVKLFASN 384
L+PLL + L F A P L K + LS F +V+P +++LF +
Sbjct: 290 LVPLLLNQLVFAEPVAVKSFLPYLLGPKKENAPGETPCLLSPALFQSRVIPVLLRLFEVH 349
Query: 385 DRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQ 444
+ +R+ LL HI+ Y + F+ + + + + P V G DTS + +TL+S+ VL L
Sbjct: 350 EEHVRMVLLSHIEAYVEHFTQEQLKKVILPQVLLGLRDTSNSIVAITLRSLAVLVSLLGP 409
Query: 445 RTISG 449
+ G
Sbjct: 410 EVVVG 414
|
May play a role in regulating cell adhesion/migration complexes in migrating cells. Mus musculus (taxid: 10090) |
| >sp|Q8IZE3|PACE1_HUMAN Protein-associating with the carboxyl-terminal domain of ezrin OS=Homo sapiens GN=SCYL3 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 136/518 (26%), Positives = 235/518 (45%), Gaps = 75/518 (14%)
Query: 44 DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103
DG S+F N + AA K L+T+RHP +L FL T ++A I+
Sbjct: 33 DGKFASVFVYKRENEDKVNKAA-----KHLKTLRHPCLLRFLSCT----VEADG----IH 79
Query: 104 IVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT 163
+VTE V PL E+ LE E A G+ I A+ FL++ L H NVCLSSV V+
Sbjct: 80 LVTERVQPL-----EVALETLSSAEVCA-GIYDILLALIFLHDRGHLTHNNVCLSSVFVS 133
Query: 164 QTLDWKLHAFDVLS-------EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRK 216
+ WKL + + EF + ++ P A P E++ ++T + +
Sbjct: 134 EDGHWKLGGMETVCKVSQATPEFLRSIQSIRDP---------ASIPPEEMS-PEFTTLPE 183
Query: 217 SPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSK 276
+ D++ G L+ L + + + ++ +S ++L + LL+ +P R
Sbjct: 184 CHGHARDAFSFGTLVESLLTILNEQVSADV--LSSFQQTL---HSTLLNPIPKCRPALCT 238
Query: 277 LIENSVGDFWMTEYFQNKLVDTIHFMEILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKL 336
L+ + ++F+N ++ ++F++ L LK EK FF+ L + L +++ +L
Sbjct: 239 LLSH--------DFFRNDFLEVVNFLKSLTLKSEEEKTEFFKFLLDRVSCLSEELIASRL 290
Query: 337 LPLLASALEFGS--AAAPALTALL---------KMGSWLSTEEFSVKVLPTIVKLFASND 385
+PLL + L F A L LL + LS F +V+P +++LF ++
Sbjct: 291 VPLLLNQLVFAEPVAVKSFLPYLLGPKKDHAQGETPCLLSPALFQSRVIPVLLQLFEVHE 350
Query: 386 RAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQR 445
+R+ LL HI+ Y + F+ + + + + P V G DTS + +TL S+ VL L
Sbjct: 351 EHVRMVLLSHIEAYVEHFTQEQLKKVILPQVLLGLRDTSDSIVAITLHSLAVLVSLLGPE 410
Query: 446 TISGSLLKYLSKLQVDEEPAIRTNTTILLGN-----IASHLNEGTRKRVLINAFTVRALR 500
+ G +K+ P+ NT + L + + SH ++ + +L N F+ +
Sbjct: 411 VVVGG---ERTKIFKRTAPSFTKNTDLSLEDSPMCVVCSHHSQIS--PILENPFSSIFPK 465
Query: 501 DTFSPARGAAKILS--YLNCDVRSKAFQAVDQFLQIVK 536
FS G+ I S ++ D + Q D F Q +K
Sbjct: 466 CFFS---GSTPINSKKHIQRDYYNTLLQTGDPFSQPIK 500
|
May play a role in regulating cell adhesion/migration complexes in migrating cells. Homo sapiens (taxid: 9606) |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 778 | ||||||
| 225448715 | 794 | PREDICTED: probable inactive serine/thre | 0.983 | 0.963 | 0.818 | 0.0 | |
| 224124488 | 800 | predicted protein [Populus trichocarpa] | 0.983 | 0.956 | 0.805 | 0.0 | |
| 225448717 | 808 | PREDICTED: probable inactive serine/thre | 0.973 | 0.936 | 0.790 | 0.0 | |
| 356576646 | 793 | PREDICTED: probable inactive serine/thre | 0.978 | 0.959 | 0.772 | 0.0 | |
| 224146234 | 794 | predicted protein [Populus trichocarpa] | 0.974 | 0.954 | 0.788 | 0.0 | |
| 449453348 | 796 | PREDICTED: probable inactive serine/thre | 0.984 | 0.962 | 0.773 | 0.0 | |
| 359486325 | 788 | PREDICTED: probable inactive serine/thre | 0.975 | 0.963 | 0.789 | 0.0 | |
| 356568471 | 793 | PREDICTED: LOW QUALITY PROTEIN: probable | 0.979 | 0.960 | 0.772 | 0.0 | |
| 356531920 | 794 | PREDICTED: LOW QUALITY PROTEIN: probable | 0.980 | 0.960 | 0.769 | 0.0 | |
| 255559707 | 792 | ATP binding protein, putative [Ricinus c | 0.978 | 0.960 | 0.782 | 0.0 |
| >gi|225448715|ref|XP_002280870.1| PREDICTED: probable inactive serine/threonine-protein kinase scy1 isoform 1 [Vitis vinifera] gi|297736476|emb|CBI25347.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1260 bits (3261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 657/803 (81%), Positives = 711/803 (88%), Gaps = 38/803 (4%)
Query: 1 MFKFLKGVVGGSGAGVKDLPYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQD 60
M KFLKGVV GSGAG+KDLPYNIG+PY SAWGSW+H +GTSKDDGSPVSIFS+SG+NAQD
Sbjct: 1 MLKFLKGVVAGSGAGLKDLPYNIGEPYSSAWGSWTHSRGTSKDDGSPVSIFSLSGSNAQD 60
Query: 61 GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELG 120
GHLAA RNGVKRLRTVRHPNIL+FLHSTE E D +STK+TIYIVTEPVMPLSEKIKELG
Sbjct: 61 GHLAAGRNGVKRLRTVRHPNILSFLHSTEAETFDGSSTKVTIYIVTEPVMPLSEKIKELG 120
Query: 121 LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180
LEG+QRDEYYAWGL+QIAKAVSFLNNDCKLVHGNVCL+SVVVTQTLDWKLHAFDVLSEFD
Sbjct: 121 LEGTQRDEYYAWGLHQIAKAVSFLNNDCKLVHGNVCLASVVVTQTLDWKLHAFDVLSEFD 180
Query: 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL 240
G++EAA GP+LQY WLVG+QYKP+EL KSDW A+RKSPPW+IDSWGLGCLIYELFSGMRL
Sbjct: 181 GHSEAATGPLLQYEWLVGSQYKPMELLKSDWAAIRKSPPWAIDSWGLGCLIYELFSGMRL 240
Query: 241 SKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQNKLVDTIH 300
KTEELRNTASIPKSLLPDYQRLLSSMP+RRLN+SKLIENS EYFQNKLVDTIH
Sbjct: 241 GKTEELRNTASIPKSLLPDYQRLLSSMPARRLNTSKLIENS-------EYFQNKLVDTIH 293
Query: 301 FMEILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKM 360
FM+ILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLP+LASALEFGSAAAPALTALLKM
Sbjct: 294 FMDILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPMLASALEFGSAAAPALTALLKM 353
Query: 361 GSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGF 420
SWLS E+FS KVLPTIVKLFASNDRAIRV LLQHIDQYG+S SAQ+VDEQVY HVATGF
Sbjct: 354 ASWLSAEDFSAKVLPTIVKLFASNDRAIRVGLLQHIDQYGESLSAQIVDEQVYTHVATGF 413
Query: 421 ADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASH 480
+DTSAFLRE+TLKSML+LAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIAS+
Sbjct: 414 SDTSAFLRELTLKSMLILAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASY 473
Query: 481 LNEGTRKRVLINAFTVRALRDTFSPARGAA------------------KILSYL------ 516
LNEGTRKRVLINAFTVRALRDTFSPARGA +IL +
Sbjct: 474 LNEGTRKRVLINAFTVRALRDTFSPARGAGVMALCATSSYYDITEIATRILPNVVVLTID 533
Query: 517 -NCDVRSKAFQAVDQFLQIVKQYHEKTNTGDATGASSVGISSMPGNASLLGWAMSSLTLK 575
+ DVRSKAFQAVDQFLQIVKQYHEKTN GD TG SS+GISS+PGNASLLGWAMSSLTLK
Sbjct: 534 PDSDVRSKAFQAVDQFLQIVKQYHEKTNAGDTTG-SSMGISSIPGNASLLGWAMSSLTLK 592
Query: 576 GKPSEQAPVASANSITPLTSTTSSTSSVMENAINAPLRHVSSGTDFADQPAGPAPPSPTS 635
KPSEQAP+A ANS PL S +S+ SSVM+ A A + +VSS TDF+DQ P SPTS
Sbjct: 593 SKPSEQAPLAPANSSAPLASASSNDSSVMDTATPASI-NVSSPTDFSDQ---AVPASPTS 648
Query: 636 TDGWGEIENGLHEDHDSDKDGWDDIEPLEEPKPSPVLANIQAAQKRPVSQPRPTATSLRP 695
TDGWGE+ENG+HE+H+SDKDGWDDIEPLEEPKP LANIQAAQKRPVSQP+P S RP
Sbjct: 649 TDGWGELENGIHEEHESDKDGWDDIEPLEEPKPPSALANIQAAQKRPVSQPKPQVPS-RP 707
Query: 696 KSTGKVPKEEDDDLWGSIAAPAPRTSSKPLNVKPAAALDDDDPWAAIAAPPPTTKAKPLA 755
K KV K+EDDDLWGSIAAPAP+T+SKPLNVK A A+D+DDPWAAIAAPPPTT+AKPL+
Sbjct: 708 KIPPKVSKDEDDDLWGSIAAPAPKTASKPLNVKTAGAVDNDDPWAAIAAPPPTTRAKPLS 767
Query: 756 AGRGRGAKPVAPKLGAQRINRTS 778
AGRGRGAKP APKLGAQRINRTS
Sbjct: 768 AGRGRGAKPAAPKLGAQRINRTS 790
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224124488|ref|XP_002319344.1| predicted protein [Populus trichocarpa] gi|222857720|gb|EEE95267.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1259 bits (3259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 652/809 (80%), Positives = 711/809 (87%), Gaps = 44/809 (5%)
Query: 1 MFKFLKGVVGGSGAGVKDLPYNIGDPYPSAWGSWSHFQGTSKDD--GSPVSIFSISGTNA 58
M +FLKGVVGGSG G+KDLPYNIGDPYPSAWGSW+H +GTSKDD GS VSIFS+SG+NA
Sbjct: 1 MLRFLKGVVGGSGTGLKDLPYNIGDPYPSAWGSWTHHRGTSKDDDGGSAVSIFSLSGSNA 60
Query: 59 QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKE 118
DGHLAA RNGVKRLRTVRHPNIL+FLHSTEVE+++ +S+++TIYIVTEPVMPLSEKIKE
Sbjct: 61 LDGHLAAGRNGVKRLRTVRHPNILSFLHSTEVESVEGSSSRVTIYIVTEPVMPLSEKIKE 120
Query: 119 LGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178
LGLEG+QRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCL+SVVVT TLDWKLHAFDVLSE
Sbjct: 121 LGLEGAQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLASVVVTPTLDWKLHAFDVLSE 180
Query: 179 FDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM 238
FDG+N A GPMLQY WL+G+QYKP+ELAKSDW A+RKSPPW+IDSWGLGCLIYELFSGM
Sbjct: 181 FDGSNGNATGPMLQYEWLIGSQYKPMELAKSDWVAIRKSPPWAIDSWGLGCLIYELFSGM 240
Query: 239 RLSKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQNKLVDT 298
+L KTEELRNT+SIPKSLL DYQRLLSSMPSRR+N++KL+ENS EYFQNKLVDT
Sbjct: 241 KLGKTEELRNTSSIPKSLLQDYQRLLSSMPSRRMNTAKLLENS-------EYFQNKLVDT 293
Query: 299 IHFMEILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALL 358
IHFMEIL LKDSVEKDTFFRKLPNLAEQLPR IVLKKLLPLLASALEFGSAAAPALTALL
Sbjct: 294 IHFMEILTLKDSVEKDTFFRKLPNLAEQLPRPIVLKKLLPLLASALEFGSAAAPALTALL 353
Query: 359 KMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVAT 418
KMGSWLS+EEFSVKVLPTIVKLF+SNDRA+RV+LLQHIDQYG+S SAQVVDEQV+PHVAT
Sbjct: 354 KMGSWLSSEEFSVKVLPTIVKLFSSNDRAVRVSLLQHIDQYGESLSAQVVDEQVFPHVAT 413
Query: 419 GFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIA 478
GF+DTSAFLRE+TLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIA
Sbjct: 414 GFSDTSAFLRELTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIA 473
Query: 479 SHLNEGTRKRVLINAFTVRALRDTFSPARGAA------------------KILSYL---- 516
S+LNEGTRKRVLINAFTVRALRDTFSPARGA +IL +
Sbjct: 474 SYLNEGTRKRVLINAFTVRALRDTFSPARGAGVMALCATSSYYDINEIATRILPNVVVLT 533
Query: 517 ---NCDVRSKAFQAVDQFLQIVKQYHEKTNTGDATGASSVGISSMPGNASLLGWAMSSLT 573
+ DVRSK+FQA +QFLQIVKQYHE TN GDA GA+S GISS+PGNASLLGWAMSSLT
Sbjct: 534 IDPDSDVRSKSFQAAEQFLQIVKQYHE-TNVGDAAGAASTGISSIPGNASLLGWAMSSLT 592
Query: 574 LKGKPSEQAPVASANSITPLTSTTSSTSSVMENAINAPLRHVSSGTDFADQPAGPAPPSP 633
KGKPSEQAP+A ANS PL+STTS+ SSVM++ AP R SSG D ADQ P P SP
Sbjct: 593 SKGKPSEQAPLAPANSGVPLSSTTSNASSVMDSPSIAPARVNSSG-DLADQ---PVPESP 648
Query: 634 TSTDGWGEIENGLHEDHDSDKDGWDDIEPLEEPKPSPVLANIQAAQKRPVSQP----RPT 689
TSTDGWGEIENG+HE+ S KDGWDDIEPLEEPKPSP LA+IQAAQKRPVSQP +
Sbjct: 649 TSTDGWGEIENGIHEEQGSVKDGWDDIEPLEEPKPSPALASIQAAQKRPVSQPVSQQKAQ 708
Query: 690 ATSLRPKSTGKVPKEEDDDLWGSIAAPAPRTSSKPLNVKPAAALDDDDPWAAIAAPPPTT 749
A S+RPKSTG+ K+EDDDLWGSIAAPAP+T+ KPLNVK A ALDDDDPWAAIAAPPPTT
Sbjct: 709 AASVRPKSTGRATKDEDDDLWGSIAAPAPKTNKKPLNVKSATALDDDDPWAAIAAPPPTT 768
Query: 750 KAKPLAAGRGRGAKPVAPKLGAQRINRTS 778
+AKPL AGRGRG KP APKLGAQRINRTS
Sbjct: 769 RAKPLVAGRGRG-KPAAPKLGAQRINRTS 796
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225448717|ref|XP_002280879.1| PREDICTED: probable inactive serine/threonine-protein kinase scy1 isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1242 bits (3213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 652/825 (79%), Positives = 706/825 (85%), Gaps = 68/825 (8%)
Query: 1 MFKFLKGVVGGSGAGVKDLPYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQD 60
M KFLKGVV GSGAG+KDLPYNIG+PY SAWGSW+H +GTSKDDGSPVSIFS+SG+NAQD
Sbjct: 1 MLKFLKGVVAGSGAGLKDLPYNIGEPYSSAWGSWTHSRGTSKDDGSPVSIFSLSGSNAQD 60
Query: 61 GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELG 120
GHLAA RNGVKRLRTVRHPNIL+FLHSTE E D +STK+TIYIVTEPVMPLSEKIKELG
Sbjct: 61 GHLAAGRNGVKRLRTVRHPNILSFLHSTEAETFDGSSTKVTIYIVTEPVMPLSEKIKELG 120
Query: 121 LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180
LEG+QRDEYYAWGL+QIAKAVSFLNNDCKLVHGNVCL+SVVVTQTLDWKLHAFDVLSEFD
Sbjct: 121 LEGTQRDEYYAWGLHQIAKAVSFLNNDCKLVHGNVCLASVVVTQTLDWKLHAFDVLSEFD 180
Query: 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL 240
G++EAA GP+LQY WLVG+QYKP+EL KSDW A+RKSPPW+IDSWGLGCLIYELFSGMRL
Sbjct: 181 GHSEAATGPLLQYEWLVGSQYKPMELLKSDWAAIRKSPPWAIDSWGLGCLIYELFSGMRL 240
Query: 241 SKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQNKLVDTIH 300
KTEELRNTASIPKSLLPDYQRLLSSMP+RRLN+SKLIENS EYFQNKLVDTIH
Sbjct: 241 GKTEELRNTASIPKSLLPDYQRLLSSMPARRLNTSKLIENS-------EYFQNKLVDTIH 293
Query: 301 FMEILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKM 360
FM+ILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLP+LASALEFGSAAAPALTALLKM
Sbjct: 294 FMDILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPMLASALEFGSAAAPALTALLKM 353
Query: 361 GSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGF 420
SWLS E+FS KVLPTIVKLFASNDRAIRV LLQHIDQYG+S SAQ+VDEQVY HVATGF
Sbjct: 354 ASWLSAEDFSAKVLPTIVKLFASNDRAIRVGLLQHIDQYGESLSAQIVDEQVYTHVATGF 413
Query: 421 ADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASH 480
+DTSAFLRE+TLKSML+LAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIAS+
Sbjct: 414 SDTSAFLRELTLKSMLILAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASY 473
Query: 481 LNEGTRKRVLINAFTVRALRDTFSPARGAA------------------KILSYL------ 516
LNEGTRKRVLINAFTVRALRDTFSPARGA +IL +
Sbjct: 474 LNEGTRKRVLINAFTVRALRDTFSPARGAGVMALCATSSYYDITEIATRILPNVVVLTID 533
Query: 517 -NCDVRSKAFQAVDQFLQIVKQYHEKTNTGDATGASSVGISSMPGNASLLGWAMSSLTLK 575
+ DVRSKAFQAVDQFLQIVKQYHEKTN GD TG SS+GISS+PGNASLLGWAMSSLTLK
Sbjct: 534 PDSDVRSKAFQAVDQFLQIVKQYHEKTNAGDTTG-SSMGISSIPGNASLLGWAMSSLTLK 592
Query: 576 GKPSEQAPVASANSITPLTSTTSSTSSVMENAINAPLRHVSSGTDFADQPAGPAPPSPTS 635
KPSEQAP+A ANS PL S +S+ +S+ +VSS TDF+DQ P SPTS
Sbjct: 593 SKPSEQAPLAPANSSAPLASASSNDTSI----------NVSSPTDFSDQ---AVPASPTS 639
Query: 636 TDGWGEIENGLHEDHDSDKDGWDDIEPLEEPKPSPVLANIQAAQKRPVSQPRP------- 688
TDGWGE+ENG+HE+H+SDKDGWDDIEPLEEPKP LANIQAAQKRPVSQP+P
Sbjct: 640 TDGWGELENGIHEEHESDKDGWDDIEPLEEPKPPSALANIQAAQKRPVSQPKPQGNIISL 699
Query: 689 ---------------TATSLRPKSTGKVPKEEDDDLWGSIAAPAPRTSSKPLNVKPAAAL 733
A RPK KV K+EDDDLWGSIAAPAP+T+SKPLNVK A A+
Sbjct: 700 ASSCFPVAYLMGDFLCAVPSRPKIPPKVSKDEDDDLWGSIAAPAPKTASKPLNVKTAGAV 759
Query: 734 DDDDPWAAIAAPPPTTKAKPLAAGRGRGAKPVAPKLGAQRINRTS 778
D+DDPWAAIAAPPPTT+AKPL+AGRGRGAKP APKLGAQRINRTS
Sbjct: 760 DNDDPWAAIAAPPPTTRAKPLSAGRGRGAKPAAPKLGAQRINRTS 804
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356576646|ref|XP_003556441.1| PREDICTED: probable inactive serine/threonine-protein kinase scy1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1237 bits (3200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/806 (77%), Positives = 695/806 (86%), Gaps = 45/806 (5%)
Query: 1 MFKFLKGVVGGSGAGVKDLPYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQD 60
MFKFLK VV GSG G+KDLPYNIG+PY SAWGSW HF+GTSKDDGSPVSIFS+SG+N+QD
Sbjct: 1 MFKFLKEVVSGSGTGLKDLPYNIGEPYASAWGSWLHFRGTSKDDGSPVSIFSLSGSNSQD 60
Query: 61 GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELG 120
GHLAA RNGVKRLRTVRHPNIL+FLHSTE+E +DA S K+TIY+VTEPVMPLS+KIKELG
Sbjct: 61 GHLAAGRNGVKRLRTVRHPNILSFLHSTEIETVDAGSPKVTIYMVTEPVMPLSDKIKELG 120
Query: 121 LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180
LEG+QRDEYYAWGL+QIAKAVSFLNNDCKLVHGNVCL+SVVVTQTLDWKLHAFDVLSEF+
Sbjct: 121 LEGTQRDEYYAWGLHQIAKAVSFLNNDCKLVHGNVCLASVVVTQTLDWKLHAFDVLSEFE 180
Query: 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL 240
G+NEA++G MLQYAWLVG+QYKP+ELAKSDW A++KSPPW+IDSWG+G LIYELFSGM+L
Sbjct: 181 GSNEASSGQMLQYAWLVGSQYKPMELAKSDWAAIKKSPPWAIDSWGMGSLIYELFSGMKL 240
Query: 241 SKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQNKLVDTIH 300
KTEELRNT SIPKSLLPDYQRLLSS+PSRRLN+SKLIENS EYFQNKLVDTIH
Sbjct: 241 GKTEELRNTVSIPKSLLPDYQRLLSSVPSRRLNTSKLIENS-------EYFQNKLVDTIH 293
Query: 301 FMEILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKM 360
FMEIL+LKDSVEKDTFFRKLPNLAEQLP+QIVLKKLLPLLASALEFGSA+APALTALLKM
Sbjct: 294 FMEILSLKDSVEKDTFFRKLPNLAEQLPQQIVLKKLLPLLASALEFGSASAPALTALLKM 353
Query: 361 GSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGF 420
GS LS EEF VKVLPTIVKLFASNDRAIRV LLQHIDQ+G+S SAQVVDEQVYPHVATGF
Sbjct: 354 GSSLSAEEFRVKVLPTIVKLFASNDRAIRVGLLQHIDQFGESLSAQVVDEQVYPHVATGF 413
Query: 421 ADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASH 480
+DTSAFLRE+TLKSML+LAPKLSQRT SGSLLK++SKLQVDEEPAIRTNTTILLGNIASH
Sbjct: 414 SDTSAFLRELTLKSMLILAPKLSQRTFSGSLLKHMSKLQVDEEPAIRTNTTILLGNIASH 473
Query: 481 LNEGTRKRVLINAFTVRALRDTFSPARGAAKIL-----SY-------------------- 515
LNEGTRKRVLINAFTVRALRDTF PARGA + SY
Sbjct: 474 LNEGTRKRVLINAFTVRALRDTFPPARGAGIMALCATSSYYDITEIATRILPNVVVLTID 533
Query: 516 LNCDVRSKAFQAVDQFLQIVKQYHEKTNTGDATGASSVGISSMPGNASLLGWAMSSLTLK 575
L+ DVRSKAFQAVDQFLQ+ KQ++EKTNT +AT +++GISS+PGNA LLGWAMSSLTLK
Sbjct: 534 LDSDVRSKAFQAVDQFLQMAKQHYEKTNTAEATEGTAIGISSLPGNAGLLGWAMSSLTLK 593
Query: 576 GKPSEQAPVASANSITPLTSTTSSTSSVMENAINAPLRHVSSGTDFADQPAGPAPPSPTS 635
GKPS+ APVAS +S + T T+S+ S ++ AP+R VSS DFA+ P SPTS
Sbjct: 594 GKPSDHAPVASVSS-SARTPTSSNASPAVDAPSTAPVR-VSSTPDFAEH---LVPTSPTS 648
Query: 636 TDGWGEIENGLHEDHDSDKDGWDDIEPLEEPKPSPVLANIQAAQKRPVSQPR---PTATS 692
TDGWGE+ENGL E+ DKDGWDD+EPLEE KP+P L NIQAAQ+RPVSQP A+S
Sbjct: 649 TDGWGELENGLGEN---DKDGWDDLEPLEEIKPTPALVNIQAAQRRPVSQPVSQIKQASS 705
Query: 693 LRPKSTGKVPKEEDDDLWGSIAAPAPRTSSKPLNVKPAAALDDDDPWAAIAAPPPTTKAK 752
L KST K+ K+ED DLWGSIAAPAP+ SSKPL++K + DDDDPWA+IAAP PTTKAK
Sbjct: 706 LLSKSTPKLSKDEDGDLWGSIAAPAPK-SSKPLSLK-STVTDDDDPWASIAAPAPTTKAK 763
Query: 753 PLAAGRGRGAKPVAPKLGAQRINRTS 778
PL+AGRGRGAK APKLGAQRINRT+
Sbjct: 764 PLSAGRGRGAKLAAPKLGAQRINRTT 789
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224146234|ref|XP_002325930.1| predicted protein [Populus trichocarpa] gi|222862805|gb|EEF00312.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1228 bits (3176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 639/810 (78%), Positives = 695/810 (85%), Gaps = 52/810 (6%)
Query: 1 MFKFLKGVVGG-SGAGVKDLPYNIGDPYPSAWGSWSHFQGTSK--DDGSPVSIFSISGTN 57
M +FLKGVVGG SG G+KDLPYNIGDPYPSAWGSW+H +GTS DDGSPVSIFS S +N
Sbjct: 1 MLRFLKGVVGGASGTGLKDLPYNIGDPYPSAWGSWTHHRGTSSKDDDGSPVSIFSFSASN 60
Query: 58 AQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIK 117
AQD HLAAARNGVKRLRTVRHPNIL+FLHSTEVE+++ +S++ITIYIVTEPVMPLSEKIK
Sbjct: 61 AQDAHLAAARNGVKRLRTVRHPNILSFLHSTEVESVEGSSSRITIYIVTEPVMPLSEKIK 120
Query: 118 ELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177
ELGLEG+QRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCL+SVVVT TLDWKLHAFDVLS
Sbjct: 121 ELGLEGTQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLASVVVTPTLDWKLHAFDVLS 180
Query: 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
EFDG+N A GPMLQY WL+G+QYKP+ELAKSDW A+RKSPPW+IDSWGLGCLIYELF+G
Sbjct: 181 EFDGSNGNATGPMLQYEWLIGSQYKPIELAKSDWVAIRKSPPWAIDSWGLGCLIYELFTG 240
Query: 238 MRLSKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQNKLVD 297
M+L KTEELRNTASIPKSLL DYQRLLSSMPSRR+N++KL+ENS EYFQNKLVD
Sbjct: 241 MKLGKTEELRNTASIPKSLLQDYQRLLSSMPSRRMNTAKLLENS-------EYFQNKLVD 293
Query: 298 TIHFMEILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTAL 357
TIHFMEIL LKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTAL
Sbjct: 294 TIHFMEILTLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTAL 353
Query: 358 LKMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVA 417
LKMGSWLS EEFSVKVLPTIVKLF+SNDRAIRV+LLQHIDQ+G S SAQVVDEQVY HVA
Sbjct: 354 LKMGSWLSAEEFSVKVLPTIVKLFSSNDRAIRVSLLQHIDQFGDSLSAQVVDEQVYSHVA 413
Query: 418 TGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNI 477
TGF+DTSA LRE+TLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEE AIRTNTTILLGNI
Sbjct: 414 TGFSDTSALLRELTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEHAIRTNTTILLGNI 473
Query: 478 ASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL-----SYLNC-------------- 518
A +LNEGTRKRVLINAFTVRALRDTF PARGA + SY +
Sbjct: 474 AIYLNEGTRKRVLINAFTVRALRDTFPPARGAGVMALCATSSYYDVTEIATRILPNVVVL 533
Query: 519 ------DVRSKAFQAVDQFLQIVKQYHEKTNTGDATGASSVGISSMPGNASLLGWAMSSL 572
DVRSK+FQAV+QF+QIVKQYHEKTN GD T AS+ ISS+P NASLLGWAMSSL
Sbjct: 534 TIDPDSDVRSKSFQAVEQFMQIVKQYHEKTNVGDTTAAST-RISSIPENASLLGWAMSSL 592
Query: 573 TLKGKPSEQAPVASANSITPLTSTTSSTSSVMENAINAPLRHVSSGTDFADQPAGPAPPS 632
T+KGKP EQAP+A ANS +PL+STTS+ N+ ++S TD ADQ P P S
Sbjct: 593 TIKGKPLEQAPLAPANSGSPLSSTTSNA--------NSAAVQINSSTDLADQ---PVPDS 641
Query: 633 PTSTDGWGEIENGLHEDHDSDKDGWDDIEPLEEPKPSPVLANIQAAQKRPVSQP----RP 688
P STDGWGEIENG+HE+ SDKDGWDDIEP EEPKPSP L NIQAAQKRPVSQP +
Sbjct: 642 PPSTDGWGEIENGIHEEQGSDKDGWDDIEPFEEPKPSPALVNIQAAQKRPVSQPVSQHKA 701
Query: 689 TATSLRPKSTGKVPKEEDDDLWGSIAAPAPRTSSKPLNVKPAAALDDDDPWAAIAAPPPT 748
ATSLRPKST KV +EDDDLWGSIAAPAP+T+++PLNVK A ALDDDDPWAAIAAPPPT
Sbjct: 702 QATSLRPKSTVKVTNDEDDDLWGSIAAPAPKTTTRPLNVKSATALDDDDPWAAIAAPPPT 761
Query: 749 TKAKPLAAGRGRGAKPVAPKLGAQRINRTS 778
T+AKPL AGRGRG KP A KLGAQRINRTS
Sbjct: 762 TRAKPLVAGRGRG-KPAASKLGAQRINRTS 790
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449453348|ref|XP_004144420.1| PREDICTED: probable inactive serine/threonine-protein kinase scy1-like [Cucumis sativus] gi|449500052|ref|XP_004160990.1| PREDICTED: probable inactive serine/threonine-protein kinase scy1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1207 bits (3122), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 622/804 (77%), Positives = 693/804 (86%), Gaps = 38/804 (4%)
Query: 1 MFKFLKGVVGGSGAGVKDLPYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQD 60
MFKFLKGVVGGSG G+KDLPYNIGDPYPSAWGSW+HF+GTSKDDGSPVSIFS+SG+NAQD
Sbjct: 1 MFKFLKGVVGGSGTGLKDLPYNIGDPYPSAWGSWTHFRGTSKDDGSPVSIFSLSGSNAQD 60
Query: 61 GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELG 120
GHLAA RNGVKRLRTVRHPNIL+FLHSTE E ID +++K+TIYIVTEPVMPLSEKIKELG
Sbjct: 61 GHLAAGRNGVKRLRTVRHPNILSFLHSTEAETIDGSASKVTIYIVTEPVMPLSEKIKELG 120
Query: 121 LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180
LEG+QRDEYYAWGL+Q+AKAVSFLNNDCKLVHGNVCL+SVVVT TLDWKLHAFDVLSEFD
Sbjct: 121 LEGTQRDEYYAWGLHQVAKAVSFLNNDCKLVHGNVCLASVVVTPTLDWKLHAFDVLSEFD 180
Query: 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL 240
G+NEA +G MLQYAWL+G+QYKP+EL KSDW A+RKSP W+IDSWGLGCLIYELFSG++L
Sbjct: 181 GSNEATSGQMLQYAWLIGSQYKPMELVKSDWAAIRKSPAWAIDSWGLGCLIYELFSGLKL 240
Query: 241 SKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQNKLVDTIH 300
KTEELRNTASIPKSLLPDYQRLLSSMPSRRLN+SKLIENS EYFQNKLVDTIH
Sbjct: 241 GKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNTSKLIENS-------EYFQNKLVDTIH 293
Query: 301 FMEILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKM 360
FMEIL+LKDSVEKDTFFRKLP LAEQLPRQIVLKKLLPLLAS+LEFGSAAAPALTALLKM
Sbjct: 294 FMEILSLKDSVEKDTFFRKLPILAEQLPRQIVLKKLLPLLASSLEFGSAAAPALTALLKM 353
Query: 361 GSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGF 420
GSWLSTEEFS KVLPTIVKLFASNDRAIR LLQHIDQ+G+S S+Q+VDEQVYPH+ATGF
Sbjct: 354 GSWLSTEEFSAKVLPTIVKLFASNDRAIRTGLLQHIDQFGESLSSQMVDEQVYPHIATGF 413
Query: 421 ADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASH 480
+DTSAFLRE+TLKSMLVLAPKLSQRTISGSLLK+LSKLQVDEEPAIRTNTTILLGNIAS+
Sbjct: 414 SDTSAFLRELTLKSMLVLAPKLSQRTISGSLLKHLSKLQVDEEPAIRTNTTILLGNIASY 473
Query: 481 LNEGTRKRVLINAFTVRALRDTFSPARGA--------------AKILSYL---------- 516
LN+GTRKRVLINAFTVRALRDTFSPARGA A+I + +
Sbjct: 474 LNDGTRKRVLINAFTVRALRDTFSPARGAGIMALCATSGYYDSAEIATRILPNVVVLTID 533
Query: 517 -NCDVRSKAFQAVDQFLQIVKQYHEKTNTGDATGASSVGISSMPGNASLLGWAMSSLTLK 575
+ DVR K+FQAVDQFLQI+KQ +EK +GD T A + I S+PGNASLLGWAMSSLTLK
Sbjct: 534 PDSDVRLKSFQAVDQFLQILKQNNEKEISGD-TAAGGLNIPSLPGNASLLGWAMSSLTLK 592
Query: 576 GKPSEQAPVASANSITPLTSTTSSTSSVMENAINAPLRHVSSGTDFADQPAGPAPPSPTS 635
GKPSE + A +S PL +T+S + SV AP+R VSS D +Q A SPTS
Sbjct: 593 GKPSEHSSSAPVSSNAPLGTTSSDSISVENAQTTAPVR-VSSSFDLTEQ---HATESPTS 648
Query: 636 TDGWGEIENGLHEDHDSDKDGWDDIEPLEEPKPSPVLANIQAAQKRPVSQP-RPTATSLR 694
TDGWGE+ENG+H++ +++KDGWD++EPL+EPKPSP LANIQAAQKRPVSQP T +
Sbjct: 649 TDGWGEVENGIHDEDETEKDGWDELEPLDEPKPSPALANIQAAQKRPVSQPVSQTKPPIL 708
Query: 695 PKSTGKVPKEEDDDLWGSIAAPAPRTSSKPLNVKPAAALDDDDPWAAIAAPPPTTKAKPL 754
S P +EDDDLWGSIAAPAPRT SKPLNVK +A +DDDDPWAAIAAP P+T+AKPL
Sbjct: 709 SGSRSARPAKEDDDLWGSIAAPAPRTVSKPLNVKSSAPVDDDDPWAAIAAPAPSTRAKPL 768
Query: 755 AAGRGRGAKPVAPKLGAQRINRTS 778
+AGRGRG+K APKLGAQRINRTS
Sbjct: 769 SAGRGRGSKAAAPKLGAQRINRTS 792
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359486325|ref|XP_003633430.1| PREDICTED: probable inactive serine/threonine-protein kinase scy1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1199 bits (3102), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 634/803 (78%), Positives = 692/803 (86%), Gaps = 44/803 (5%)
Query: 1 MFKFLKGVVGGSGAGVKDLPYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQD 60
M KFLKGVV GSGAG+KDLPYNIG+PY SAWGSW+H +GTSKDDGSPVSIFS+SG+NAQD
Sbjct: 1 MLKFLKGVVAGSGAGLKDLPYNIGEPYSSAWGSWTHSRGTSKDDGSPVSIFSLSGSNAQD 60
Query: 61 GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELG 120
GHLAA RNGVKRLRTVRHPNIL+FLHSTE E D +STK+TIYIVTEPVMPLSEKIKELG
Sbjct: 61 GHLAAGRNGVKRLRTVRHPNILSFLHSTEAETFDGSSTKVTIYIVTEPVMPLSEKIKELG 120
Query: 121 LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180
LEG+QRDEYYAWGL+QIAKAVSFLNNDCKLVHGNVCL+SVVVTQTLDWKLHAFDVLSEFD
Sbjct: 121 LEGTQRDEYYAWGLHQIAKAVSFLNNDCKLVHGNVCLASVVVTQTLDWKLHAFDVLSEFD 180
Query: 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL 240
G++EAA GP+LQY WLVG+QYKP+EL KSDW A+RKSPPW+IDSWGL Y L +
Sbjct: 181 GHSEAATGPLLQYEWLVGSQYKPMELLKSDWAAIRKSPPWAIDSWGL-VAFYLLKNSFSF 239
Query: 241 SKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQNKLVDTIH 300
+ L + +SLLPDYQRLLSSMP+RRLN+SKLIENS EYFQNKLVDTIH
Sbjct: 240 ASVYFL-----VSQSLLPDYQRLLSSMPARRLNTSKLIENS-------EYFQNKLVDTIH 287
Query: 301 FMEILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKM 360
FM+ILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLP+LASALEFGSAAAPALTALLKM
Sbjct: 288 FMDILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPMLASALEFGSAAAPALTALLKM 347
Query: 361 GSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGF 420
SWLS E+FS KVLPTIVKLFASNDRAIRV LLQHIDQYG+S SAQ+VDEQVY HVATGF
Sbjct: 348 ASWLSAEDFSAKVLPTIVKLFASNDRAIRVGLLQHIDQYGESLSAQIVDEQVYTHVATGF 407
Query: 421 ADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASH 480
+DTSAFLRE+TLKSML+LAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIAS+
Sbjct: 408 SDTSAFLRELTLKSMLILAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASY 467
Query: 481 LNEGTRKRVLINAFTVRALRDTFSPARGAA------------------KILSYL------ 516
LNEGTRKRVLINAFTVRALRDTFSPARGA +IL +
Sbjct: 468 LNEGTRKRVLINAFTVRALRDTFSPARGAGVMALCATSSYYDITEIATRILPNVVVLTID 527
Query: 517 -NCDVRSKAFQAVDQFLQIVKQYHEKTNTGDATGASSVGISSMPGNASLLGWAMSSLTLK 575
+ DVRSKAFQAVDQFLQIVKQYHEKTN GD TG SS+GISS+PGNASLLGWAMSSLTLK
Sbjct: 528 PDSDVRSKAFQAVDQFLQIVKQYHEKTNAGDTTG-SSMGISSIPGNASLLGWAMSSLTLK 586
Query: 576 GKPSEQAPVASANSITPLTSTTSSTSSVMENAINAPLRHVSSGTDFADQPAGPAPPSPTS 635
KPSEQAP+A ANS PL S +S+ SSVM+ A A + +VSS TDF+DQ P SPTS
Sbjct: 587 SKPSEQAPLAPANSSAPLASASSNDSSVMDTATPASI-NVSSPTDFSDQ---AVPASPTS 642
Query: 636 TDGWGEIENGLHEDHDSDKDGWDDIEPLEEPKPSPVLANIQAAQKRPVSQPRPTATSLRP 695
TDGWGE+ENG+HE+H+SDKDGWDDIEPLEEPKP LANIQAAQKRPVSQP+P S RP
Sbjct: 643 TDGWGELENGIHEEHESDKDGWDDIEPLEEPKPPSALANIQAAQKRPVSQPKPQVPS-RP 701
Query: 696 KSTGKVPKEEDDDLWGSIAAPAPRTSSKPLNVKPAAALDDDDPWAAIAAPPPTTKAKPLA 755
K KV K+EDDDLWGSIAAPAP+T+SKPLNVK A A+D+DDPWAAIAAPPPTT+AKPL+
Sbjct: 702 KIPPKVSKDEDDDLWGSIAAPAPKTASKPLNVKTAGAVDNDDPWAAIAAPPPTTRAKPLS 761
Query: 756 AGRGRGAKPVAPKLGAQRINRTS 778
AGRGRGAKP APKLGAQRINRTS
Sbjct: 762 AGRGRGAKPAAPKLGAQRINRTS 784
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356568471|ref|XP_003552434.1| PREDICTED: LOW QUALITY PROTEIN: probable inactive serine/threonine-protein kinase scy1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1190 bits (3079), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/806 (77%), Positives = 695/806 (86%), Gaps = 44/806 (5%)
Query: 1 MFKFLKGVVGGSGAGVKDLPYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQD 60
MFKFLK VVGGSG GVKDLPY I + YPSAWGSW+H +GTSKDDGSPVS+FS+SG+NAQD
Sbjct: 1 MFKFLKEVVGGSGTGVKDLPYTIAESYPSAWGSWTHSRGTSKDDGSPVSVFSLSGSNAQD 60
Query: 61 GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELG 120
GHLAAARNGVKRLRTVRHPNIL+FLHSTE+E DA S K+TIYIVTEPVMPLSEKIKELG
Sbjct: 61 GHLAAARNGVKRLRTVRHPNILSFLHSTEIETYDAGSPKVTIYIVTEPVMPLSEKIKELG 120
Query: 121 LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180
LEG+QRDEYYA GL+QIAKAVSFLNNDCKLVHGNVC++SVVVT TLDWKLHAFDVLSEFD
Sbjct: 121 LEGTQRDEYYALGLHQIAKAVSFLNNDCKLVHGNVCMASVVVTPTLDWKLHAFDVLSEFD 180
Query: 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL 240
G++E ++G MLQYAWLVG+QYKP+ELAKSDW A++KSPPW+IDSWG+GCLIYE+FSG+RL
Sbjct: 181 GSSEMSSGQMLQYAWLVGSQYKPMELAKSDWDAIKKSPPWAIDSWGMGCLIYEVFSGLRL 240
Query: 241 SKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQNKLVDTIH 300
KTEELRN SIPKSLLPDYQRLLSSMPSRRLN+SKLIENS EYFQNKLVDTIH
Sbjct: 241 GKTEELRNIGSIPKSLLPDYQRLLSSMPSRRLNTSKLIENS-------EYFQNKLVDTIH 293
Query: 301 FMEILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKM 360
FMEIL+LKDSVE+DTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAA ALTALLKM
Sbjct: 294 FMEILSLKDSVERDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAASALTALLKM 353
Query: 361 GSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGF 420
GSWLS EEF+VKVLPTIVKLFASNDRAIRVALLQHIDQYG+S SAQ VDEQVYPHVATGF
Sbjct: 354 GSWLSAEEFNVKVLPTIVKLFASNDRAIRVALLQHIDQYGESLSAQAVDEQVYPHVATGF 413
Query: 421 ADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASH 480
+DTSAFLRE+TLKSML+LAPKLSQRT+SGSLLKYLSKLQVDEEPAIRTNTTILLGNI S+
Sbjct: 414 SDTSAFLRELTLKSMLILAPKLSQRTMSGSLLKYLSKLQVDEEPAIRTNTTILLGNIGSY 473
Query: 481 LNEGTRKRVLINAFTVRALRDTFSPARGAA------------------KILSYL------ 516
LNEGTRKRVLINAFTVRALRDTF PARGA +IL +
Sbjct: 474 LNEGTRKRVLINAFTVRALRDTFPPARGAGIMALCATSSYYDITEVATRILPNVVVLTID 533
Query: 517 -NCDVRSKAFQAVDQFLQIVKQYHEKTNTGDATGASSVGISSMPGNASLLGWAMSSLTLK 575
+ DVR+KAFQAVDQFLQI KQ++EKTN D TG + VG SS+PGNASLLGWAMSSLTLK
Sbjct: 534 PDSDVRTKAFQAVDQFLQIAKQHYEKTNAADTTGVAGVGSSSVPGNASLLGWAMSSLTLK 593
Query: 576 GKPSEQAPVASANSITPLTSTTSSTSSVMENAINAPLRHVSSGTDFADQPAGPAPPSPTS 635
GKPS+ APVASA+S +++++ T+ + E AP R V+S +D A+ P P SPTS
Sbjct: 594 GKPSDHAPVASASSTAITSTSSNGTAGI-ETPSTAPAR-VNSTSDLAEH---PVPTSPTS 648
Query: 636 TDGWGEIENGLHEDHDSDKDGWDDIEPLEEPKPSPVLANIQAAQKRPVSQP---RPTATS 692
TDGWGE+ENG+ E+H SD+DGWDD+EPLEE KP+ LANIQAAQ+RPVSQP A++
Sbjct: 649 TDGWGELENGIDEEHGSDRDGWDDLEPLEESKPA--LANIQAAQRRPVSQPISHTKQASN 706
Query: 693 LRPKSTGKVPKEEDDDLWGSIAAPAPRTSSKPLNVKPAAALDDDDPWAAIAAPPPTTKAK 752
L KST K+ K+EDDDLWGSIAAPAP+T ++PLN+K +A DDDDPWAAIAAP PTTKAK
Sbjct: 707 LLSKSTPKLNKDEDDDLWGSIAAPAPKT-ARPLNLK-SAQTDDDDPWAAIAAPAPTTKAK 764
Query: 753 PLAAGRGRGAKPVAPKLGAQRINRTS 778
PL+ GRGRGAKP APKLGAQRINRTS
Sbjct: 765 PLSTGRGRGAKPAAPKLGAQRINRTS 790
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356531920|ref|XP_003534524.1| PREDICTED: LOW QUALITY PROTEIN: probable inactive serine/threonine-protein kinase scy1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1186 bits (3068), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 620/806 (76%), Positives = 690/806 (85%), Gaps = 43/806 (5%)
Query: 1 MFKFLKGVVGGSGAGVKDLPYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQD 60
MFKFLK VVGGSG GVKDLPY I +PYPSAWGSW+H +GTSKDDGSPVS+FS+SG+NAQD
Sbjct: 1 MFKFLKEVVGGSGTGVKDLPYTIAEPYPSAWGSWTHSRGTSKDDGSPVSVFSLSGSNAQD 60
Query: 61 GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELG 120
GHLAAARNGVKRLRTVRHPNIL+FLHS E+E DA S K+TIYIVTEPVMPLSEKIKELG
Sbjct: 61 GHLAAARNGVKRLRTVRHPNILSFLHSAEIETYDAGSPKVTIYIVTEPVMPLSEKIKELG 120
Query: 121 LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180
LEG+QRDEYYA GL+QIAKAVSFLNNDCKLVHGN+C++S VVT TLDWKLHA DVLSEFD
Sbjct: 121 LEGTQRDEYYALGLHQIAKAVSFLNNDCKLVHGNICMASTVVTPTLDWKLHALDVLSEFD 180
Query: 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL 240
G++EA++G MLQYAWLVG+QYKP+ELAKSDW A++KSPPW+IDSWG+GCLIYE+FSG+RL
Sbjct: 181 GSSEASSGQMLQYAWLVGSQYKPMELAKSDWDAIKKSPPWAIDSWGMGCLIYEVFSGLRL 240
Query: 241 SKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQNKLVDTIH 300
KTEELRN SIPKSLLPDYQRLLSSMPSRRLN+SKLIENS EYFQNKLVDTIH
Sbjct: 241 GKTEELRNIGSIPKSLLPDYQRLLSSMPSRRLNTSKLIENS-------EYFQNKLVDTIH 293
Query: 301 FMEILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKM 360
FMEIL+LKDSVE+DTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAA ALTALLKM
Sbjct: 294 FMEILSLKDSVERDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAASALTALLKM 353
Query: 361 GSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGF 420
GSWLS EEF+VKVLPTIVKLFASNDRAIRVALLQHIDQYG+S SAQ VDEQVYPHVATGF
Sbjct: 354 GSWLSAEEFNVKVLPTIVKLFASNDRAIRVALLQHIDQYGESLSAQAVDEQVYPHVATGF 413
Query: 421 ADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASH 480
+DTSAFLRE+TLKSML+LAPKLSQRT+SGSLLKYLSKLQVDEEPAIRTNTTILLGNI S+
Sbjct: 414 SDTSAFLRELTLKSMLILAPKLSQRTMSGSLLKYLSKLQVDEEPAIRTNTTILLGNIGSY 473
Query: 481 LNEGTRKRVLINAFTVRALRDTFSPARGAA------------------KILSYL------ 516
LNEGTRKRVLINAFTVRALRDTF PARGA +IL +
Sbjct: 474 LNEGTRKRVLINAFTVRALRDTFPPARGAGIMALCATSSYYDITEVATRILPNVVVLTID 533
Query: 517 -NCDVRSKAFQAVDQFLQIVKQYHEKTNTGDATGASSVGISSMPGNASLLGWAMSSLTLK 575
+ DVR+KAFQAVDQFLQI KQ++EKTN D + VG SS+PGNASLLGWAMSSLTLK
Sbjct: 534 PDSDVRTKAFQAVDQFLQIAKQHYEKTNAADTS--CGVGSSSVPGNASLLGWAMSSLTLK 591
Query: 576 GKPSEQAPVASANSITPLTSTTSSTSSVMENAINAPLRHVSSGTDFADQPAGPAPPSPTS 635
GKPS+ APVASA+S +++++ T +E A HVSS D A+ P P SPTS
Sbjct: 592 GKPSDHAPVASASSTAITSTSSNGTXLGIETPSTAA-AHVSSTADLAEHPV---PTSPTS 647
Query: 636 TDGWGEIENGLHEDHDSDKDGWDDIEPLEEPKPSPVLANIQAAQKRPVSQP---RPTATS 692
TDGWGE+ENG+ E+H SD+DGWDD+EPLEE KP+P LANIQAAQ+RPVSQP A++
Sbjct: 648 TDGWGELENGIDEEHGSDRDGWDDLEPLEETKPAPALANIQAAQRRPVSQPISHTKQASN 707
Query: 693 LRPKSTGKVPKEEDDDLWGSIAAPAPRTSSKPLNVKPAAALDDDDPWAAIAAPPPTTKAK 752
L KST K+ K+EDDDLWGSIAAPAP+T ++PLN+K +A DDDDPWAAIAAP PT KAK
Sbjct: 708 LLSKSTPKLNKDEDDDLWGSIAAPAPKT-ARPLNLK-SAQTDDDDPWAAIAAPAPTIKAK 765
Query: 753 PLAAGRGRGAKPVAPKLGAQRINRTS 778
PL+AGRGRGAKP APKLGAQRINRTS
Sbjct: 766 PLSAGRGRGAKPAAPKLGAQRINRTS 791
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255559707|ref|XP_002520873.1| ATP binding protein, putative [Ricinus communis] gi|223540004|gb|EEF41582.1| ATP binding protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1177 bits (3045), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 630/805 (78%), Positives = 687/805 (85%), Gaps = 44/805 (5%)
Query: 1 MFKFLKGVVGGSGAGVKDLPYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQD 60
M KFLKGVVGGSG GVKDLPYNIG+PYPSAWGSW+H +GTSKDDGSPVS+FS+SG+NAQD
Sbjct: 1 MLKFLKGVVGGSGTGVKDLPYNIGEPYPSAWGSWTHHRGTSKDDGSPVSVFSLSGSNAQD 60
Query: 61 GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELG 120
GHLAA RNGVKRLRTVRHPNIL+FLHSTEVE D +++K+TIY+VTEPVMPLSEKIKELG
Sbjct: 61 GHLAAGRNGVKRLRTVRHPNILSFLHSTEVETFDGSTSKVTIYMVTEPVMPLSEKIKELG 120
Query: 121 LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180
LEG+QRDEYYAWGL+QIAKAVSFLNNDCKLVHGNVC++S+VVT TLDWKLHAFDVLSEFD
Sbjct: 121 LEGTQRDEYYAWGLHQIAKAVSFLNNDCKLVHGNVCMASIVVTPTLDWKLHAFDVLSEFD 180
Query: 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL 240
GNNE A GPMLQY WL+G QYKP+EL KSDW ++RKSP W+IDSWGL I +S
Sbjct: 181 GNNETATGPMLQYEWLIGTQYKPMELVKSDWVSIRKSPTWAIDSWGLVAWISSEYS-FYF 239
Query: 241 SKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQNKLVDTIH 300
+ L +SLL DYQRLLSSMPSRR+N+SKLIEN EYFQNKLVDTIH
Sbjct: 240 ASVYFL-----ALQSLLQDYQRLLSSMPSRRMNTSKLIENG-------EYFQNKLVDTIH 287
Query: 301 FMEILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKM 360
FMEIL LKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLAS+LEFGSAAAPALTALLKM
Sbjct: 288 FMEILTLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASSLEFGSAAAPALTALLKM 347
Query: 361 GSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGF 420
GSWLS EEFS KVLPTIVKLFASNDRAIRV+LLQHIDQYG+S SAQVVDEQVYPHVATGF
Sbjct: 348 GSWLSAEEFSAKVLPTIVKLFASNDRAIRVSLLQHIDQYGESLSAQVVDEQVYPHVATGF 407
Query: 421 ADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASH 480
+DTSAFLRE+TLKSMLVLAPKLSQRTISG+LLKYLSKLQVDEEPAIRTNTTILLGNIAS
Sbjct: 408 SDTSAFLRELTLKSMLVLAPKLSQRTISGTLLKYLSKLQVDEEPAIRTNTTILLGNIASF 467
Query: 481 LNEGTRKRVLINAFTVRALRDTFSPARGAA------------------KILSYL------ 516
LNEGTRKRVLINAFTVRALRDTFSPARGA +IL +
Sbjct: 468 LNEGTRKRVLINAFTVRALRDTFSPARGAGIMALCATSSYYDINEIATRILPNVVVLTID 527
Query: 517 -NCDVRSKAFQAVDQFLQIVKQYHEKTNTGDATGASSVGISSMPGNASLLGWAMSSLTLK 575
+ DVRSKAFQAV+QFLQIVKQYHEKTN GD + A+++GISS+PGNASLLGWAMSSLTLK
Sbjct: 528 GDSDVRSKAFQAVEQFLQIVKQYHEKTNAGDTSAATTLGISSIPGNASLLGWAMSSLTLK 587
Query: 576 GKPSEQAPVASANSITPLTSTTSSTSSVMENAINAPLRHVSSGTDFADQPAGPAPPSPTS 635
GKPSEQA +A NS PL ST S+ SSV++ AP+R V+S TDFADQ P P SPTS
Sbjct: 588 GKPSEQASLAPVNSDAPLISTASNASSVLDTPSAAPIR-VNSSTDFADQ---PVPGSPTS 643
Query: 636 TDGWGEIENGLHEDHDSDKDGWDDIEPLEEPKPSPVLANIQAAQKRPVSQP--RPTATSL 693
TDGWGEIENG E+HDSDKDGWDDIEPLEEPKPSP LANIQAAQKRPVSQP +P L
Sbjct: 644 TDGWGEIENGTQEEHDSDKDGWDDIEPLEEPKPSPALANIQAAQKRPVSQPVSQPRQQGL 703
Query: 694 RPKSTGKVPKEEDDDLWGSIAAPAPRTSSKPLNVKPAAALDDDDPWAAIAAPPPTTKAKP 753
RPK+ KV K+EDDDLWGSIAAPAP+T+SKPLNV+ A+A DDDDPWAAIAAPPPTTKAKP
Sbjct: 704 RPKNAVKVTKDEDDDLWGSIAAPAPKTTSKPLNVRAASAADDDDPWAAIAAPPPTTKAKP 763
Query: 754 LAAGRGRGAKPVAPKLGAQRINRTS 778
L+AGRGRG KP A KLGAQRINRTS
Sbjct: 764 LSAGRGRGTKPAALKLGAQRINRTS 788
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 778 | ||||||
| TAIR|locus:2064821 | 798 | CTEXP "AT2G40730" [Arabidopsis | 0.895 | 0.873 | 0.693 | 1.6e-260 | |
| UNIPROTKB|A6QLH6 | 807 | SCYL1 "N-terminal kinase-like | 0.794 | 0.765 | 0.350 | 3e-89 | |
| UNIPROTKB|F1MVK2 | 807 | SCYL1 "N-terminal kinase-like | 0.794 | 0.765 | 0.350 | 3e-89 | |
| UNIPROTKB|F1RRK0 | 807 | SCYL1 "Uncharacterized protein | 0.853 | 0.822 | 0.333 | 7.5e-89 | |
| RGD|1307330 | 807 | Scyl1 "SCY1-like 1 (S. cerevis | 0.534 | 0.515 | 0.401 | 2.9e-86 | |
| UNIPROTKB|Q5M9F8 | 807 | Scyl1 "N-terminal kinase-like | 0.534 | 0.515 | 0.401 | 2.9e-86 | |
| MGI|MGI:1931787 | 806 | Scyl1 "SCY1-like 1 (S. cerevis | 0.534 | 0.516 | 0.394 | 5.9e-86 | |
| UNIPROTKB|E9PK59 | 780 | SCYL1 "N-terminal kinase-like | 0.534 | 0.533 | 0.397 | 1.2e-85 | |
| UNIPROTKB|E9PS17 | 775 | SCYL1 "N-terminal kinase-like | 0.534 | 0.536 | 0.397 | 1.2e-85 | |
| UNIPROTKB|Q96KG9 | 808 | SCYL1 "N-terminal kinase-like | 0.534 | 0.514 | 0.397 | 1.2e-85 |
| TAIR|locus:2064821 CTEXP "AT2G40730" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2507 (887.6 bits), Expect = 1.6e-260, P = 1.6e-260
Identities = 510/735 (69%), Positives = 576/735 (78%)
Query: 1 MFKFLKXXXXXXXXXXKDLPYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQD 60
MFKFLK KDLPYNIGDPYPSAWGSWSHF+GTSKDDGSPVSIF++SG NAQD
Sbjct: 1 MFKFLKGVVAGSGTGLKDLPYNIGDPYPSAWGSWSHFRGTSKDDGSPVSIFALSGNNAQD 60
Query: 61 GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELG 120
GHLAA RNGVKRLRTVRHPNIL+FLHSTEVE D ++TK+TIYIVTEPVMPLS+KIKELG
Sbjct: 61 GHLAAGRNGVKRLRTVRHPNILSFLHSTEVETHDGSTTKVTIYIVTEPVMPLSDKIKELG 120
Query: 121 LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180
L+ +QRDEY+A GL+QI KAVSFLNNDCKLVHGNVCL+SVVVT TLDWKLHA DVLSEFD
Sbjct: 121 LKATQRDEYFALGLHQIGKAVSFLNNDCKLVHGNVCLASVVVTPTLDWKLHALDVLSEFD 180
Query: 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL 240
G+NE+A+GPML Y WLVG QYKP+E+ KSDW A+RKSPPW+IDSWGLGCLIYELFSG +L
Sbjct: 181 GSNESASGPMLPYEWLVGTQYKPMEMVKSDWVAIRKSPPWAIDSWGLGCLIYELFSGSKL 240
Query: 241 SKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQNKLVDTIH 300
+KTEELRNT IPKSLLPDYQRLLSSMPSRRLN+SKL+EN EYFQNKLVDTIH
Sbjct: 241 AKTEELRNTVGIPKSLLPDYQRLLSSMPSRRLNTSKLLENG-------EYFQNKLVDTIH 293
Query: 301 FMEILNLKDSVEKDTFFRKLPNLAEQLPRQIVXXXXXXXXXXXXEFGSAAAPALTALLKM 360
FM+ILNLKDSVEKDTFFRKLPN+AEQLPR+IV EFGSAAAPALTALLKM
Sbjct: 294 FMDILNLKDSVEKDTFFRKLPNVAEQLPREIVLKKLLPLLASSLEFGSAAAPALTALLKM 353
Query: 361 GSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGF 420
GSWLSTE+FSVKVLPTIVKLFASNDRAIRV+LLQH+DQ+G+S S Q+VDEQVYPHVATGF
Sbjct: 354 GSWLSTEDFSVKVLPTIVKLFASNDRAIRVSLLQHVDQFGESMSGQIVDEQVYPHVATGF 413
Query: 421 ADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASH 480
ADTSAFLRE+TLKSMLVLAPKLSQRT+SGSLLKYLSKLQVDEEPAIRTNTTILLGNIA++
Sbjct: 414 ADTSAFLRELTLKSMLVLAPKLSQRTLSGSLLKYLSKLQVDEEPAIRTNTTILLGNIATY 473
Query: 481 LNEGTRKRVLINAFTVRALRDTFSPARGA------AKILSYLNCDVRSKAFQ-----AVD 529
LNEGTRKRVLINAFTVRALRDTF PARGA A +Y + ++ ++ +D
Sbjct: 474 LNEGTRKRVLINAFTVRALRDTFPPARGAGIVALCATSTTYDDTEIATRILPNIVVLTID 533
Query: 530 Q-------FLQIVKQYHE--KTNTGDATGASSVGIS----SMPGNASLLGWAMSSLTLKG 576
Q Q V+Q+ + K N + T A +G S ++P A L+GWAMSSLTLKG
Sbjct: 534 QDSDVRSKAFQAVEQFLQILKQNY-EKTNAGEIGASGGASAIPETAGLIGWAMSSLTLKG 592
Query: 577 KPSEQAPVASANSITPLXXXXXXXXXVMENAINAPLRHVSSGTDFAXXXXXXXXXXXXXX 636
KP EQAP+AS++S L A + H + +
Sbjct: 593 KPLEQAPLASSSSAPSLAAAASNATSTATEAPSVKASHHTRSN--SDFTDQPAPPSPTST 650
Query: 637 XXWGEIENGLHEDHDSDKDGWDDIEPLEEPKPSPVLANIQAAQKRPVSQP-RPTA-TSLR 694
WG+ ENG+ E H+SDKDGWD +EPL+EPKPSP LANIQAAQKRPVSQ RP+A TS R
Sbjct: 651 DGWGDAENGISEGHESDKDGWD-LEPLDEPKPSPALANIQAAQKRPVSQSSRPSAATSSR 709
Query: 695 PK-STGKVPKEEDDD 708
PK ST K + +DD
Sbjct: 710 PKISTVKAAAKTEDD 724
|
|
| UNIPROTKB|A6QLH6 SCYL1 "N-terminal kinase-like protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 869 (311.0 bits), Expect = 3.0e-89, Sum P(2) = 3.0e-89
Identities = 242/691 (35%), Positives = 343/691 (49%)
Query: 17 KDLPYNIGDPYP--SAWGSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLR 74
+D P+ + P S G W +G K GSPVSIF + A+ KRL+
Sbjct: 10 RDFPFELSPEPPEGSPPGPWVLHRGRKKATGSPVSIFVYDVKPVAEEQTQVAKAAFKRLK 69
Query: 75 TVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGL 134
T+RHPNILA+ ID T +++VTE V PL +K G ++ +WGL
Sbjct: 70 TLRHPNILAY--------IDGLETDKCLHVVTEAVTPLGVYLKARAEAGGLKELELSWGL 121
Query: 135 NQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYA 194
+QI KA+SFL NDC L+H NVC+++V V + +WKL D + GN GP +
Sbjct: 122 HQIVKALSFLVNDCSLIHNNVCMAAVFVDRAGEWKLGGLDYMYSAQGNG---GGPPRKGI 178
Query: 195 WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASIPK 254
+ QY P ELA AVR+ WS D W LGCLI+E+F+G L + LRN IPK
Sbjct: 179 PEL-EQYDPPELADGSGRAVREK--WSADMWRLGCLIWEVFNGP-LPRAAALRNPGKIPK 234
Query: 255 SLLPDYQRLLSSMPSRRLNSSKLIEN--SVGDFWMTEYFQNKLVDTIHFMEILNLKDSVE 312
SL+P Y L+ + P R N ++ ++N + G F N+ V+T F+E + +K+ E
Sbjct: 235 SLVPHYCELVGANPKVRPNPARFLQNCRAPGGF-----MNNRFVETNLFLEEIQIKEPAE 289
Query: 313 KDTFFRKLPNLAEQLPRQIVXXXXXXXXXXXXEFGSAAAPALTALLKMGSWLSTEEFSVK 372
K FF++L + P EFGSA A LT L K+G +L+ EE+ K
Sbjct: 290 KQKFFQELSKSLDSFPEDFCRHKVLPQLLTAFEFGSAGAVVLTPLFKVGKFLNAEEYQQK 349
Query: 373 VLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTL 432
++P +VK+F+S DRA+R+ LLQ ++Q+ Q V+ Q++PHV GF DT+ +RE T+
Sbjct: 350 IIPVVVKMFSSTDRAMRIRLLQQMEQFIQYLDEPTVNTQIFPHVVHGFLDTNPAIREQTV 409
Query: 433 KSMLVLAPKLSQRTISGSLLKYLSKLQV-DEEPAIRTNTTILLGNIASHLNEGTRKRVLI 491
KSML+LAPKL++ ++ L+K+ ++LQ DE+ IR NTT+ LG I S+L+ TR RVL
Sbjct: 410 KSMLLLAPKLNETNLNVELMKHFARLQAKDEQGPIRCNTTVCLGKIGSYLSASTRHRVLT 469
Query: 492 NAFTVRALRDTFSPARGAA------------------KILSYLNC--------DVRSKAF 525
+AF+ RA +D F+P+R A KIL L C VR +AF
Sbjct: 470 SAFS-RATKDPFAPSRVAGVLGFAATHNLYSMNDCAHKILPVL-CGLTVDPEKSVRDQAF 527
Query: 526 QAVDQFLQIVKQYHEKTNTGDATGASSVGISSMPGNASLLGWAMSSLTLKGKPSEQAPVA 585
+A+ FL ++ E T A V +S PG +G A +S G V
Sbjct: 528 KAIRSFLSKLESVSEDP-TQLAEVEKDVHAASSPG----MGGAAASWA--GWA-----VT 575
Query: 586 SANSITPLXXXXXXXXXVMENAINAPLRHVSSGTDFAXXXXXXXXXXXXXXXXWGEIENG 645
+S+T + E N P R G W E
Sbjct: 576 GVSSLTSKLIRAHPTAALAET--NVPQRPAPEG--LPAPAPTPVPATPTTSGPWETQEES 631
Query: 646 LHEDHDSDK-DGWDDIE--PLEEPKPSPVLA 673
+ DS D WDD + LE+ S VLA
Sbjct: 632 KDTEEDSSAADRWDDEDWGSLEQEAES-VLA 661
|
|
| UNIPROTKB|F1MVK2 SCYL1 "N-terminal kinase-like protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 869 (311.0 bits), Expect = 3.0e-89, Sum P(2) = 3.0e-89
Identities = 242/691 (35%), Positives = 343/691 (49%)
Query: 17 KDLPYNIGDPYP--SAWGSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLR 74
+D P+ + P S G W +G K GSPVSIF + A+ KRL+
Sbjct: 10 RDFPFELSPEPPEGSPPGPWVLHRGRKKATGSPVSIFVYDVKPGAEEQTQVAKAAFKRLK 69
Query: 75 TVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGL 134
T+RHPNILA+ ID T +++VTE V PL +K G ++ +WGL
Sbjct: 70 TLRHPNILAY--------IDGLETDKCLHVVTEAVTPLGVYLKARAEAGGLKELELSWGL 121
Query: 135 NQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYA 194
+QI KA+SFL NDC L+H NVC+++V V + +WKL D + GN GP +
Sbjct: 122 HQIVKALSFLVNDCSLIHNNVCMAAVFVDRAGEWKLGGLDYMYSAQGNG---GGPPRKGI 178
Query: 195 WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASIPK 254
+ QY P ELA AVR+ WS D W LGCLI+E+F+G L + LRN IPK
Sbjct: 179 PEL-EQYDPPELADGSGRAVREK--WSADMWRLGCLIWEVFNGP-LPRAAALRNPGKIPK 234
Query: 255 SLLPDYQRLLSSMPSRRLNSSKLIEN--SVGDFWMTEYFQNKLVDTIHFMEILNLKDSVE 312
SL+P Y L+ + P R N ++ ++N + G F N+ V+T F+E + +K+ E
Sbjct: 235 SLVPHYCELVGANPKVRPNPARFLQNCRAPGGF-----MNNRFVETNLFLEEIQIKEPAE 289
Query: 313 KDTFFRKLPNLAEQLPRQIVXXXXXXXXXXXXEFGSAAAPALTALLKMGSWLSTEEFSVK 372
K FF++L + P EFGSA A LT L K+G +L+ EE+ K
Sbjct: 290 KQKFFQELSKSLDSFPEDFCRHKVLPQLLTAFEFGSAGAVVLTPLFKVGKFLNAEEYQQK 349
Query: 373 VLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTL 432
++P +VK+F+S DRA+R+ LLQ ++Q+ Q V+ Q++PHV GF DT+ +RE T+
Sbjct: 350 IIPVVVKMFSSTDRAMRIRLLQQMEQFIQYLDEPTVNTQIFPHVVHGFLDTNPAIREQTV 409
Query: 433 KSMLVLAPKLSQRTISGSLLKYLSKLQV-DEEPAIRTNTTILLGNIASHLNEGTRKRVLI 491
KSML+LAPKL++ ++ L+K+ ++LQ DE+ IR NTT+ LG I S+L+ TR RVL
Sbjct: 410 KSMLLLAPKLNETNLNVELMKHFARLQAKDEQGPIRCNTTVCLGKIGSYLSASTRHRVLT 469
Query: 492 NAFTVRALRDTFSPARGAA------------------KILSYLNC--------DVRSKAF 525
+AF+ RA +D F+P+R A KIL L C VR +AF
Sbjct: 470 SAFS-RATKDPFAPSRVAGVLGFAATHNLYSMNDCAHKILPVL-CGLTVDPEKSVRDQAF 527
Query: 526 QAVDQFLQIVKQYHEKTNTGDATGASSVGISSMPGNASLLGWAMSSLTLKGKPSEQAPVA 585
+A+ FL ++ E T A V +S PG +G A +S G V
Sbjct: 528 KAIRSFLSKLESVSEDP-TQLAEVEKDVHAASSPG----MGGAAASWA--GWA-----VT 575
Query: 586 SANSITPLXXXXXXXXXVMENAINAPLRHVSSGTDFAXXXXXXXXXXXXXXXXWGEIENG 645
+S+T + E N P R G W E
Sbjct: 576 GVSSLTSKLIRAHPTAALAET--NVPQRPAPEG--LPAPAPTPVPATPTTSGPWETQEES 631
Query: 646 LHEDHDSDK-DGWDDIE--PLEEPKPSPVLA 673
+ DS D WDD + LE+ S VLA
Sbjct: 632 KDTEEDSSAADRWDDEDWGSLEQEAES-VLA 661
|
|
| UNIPROTKB|F1RRK0 SCYL1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 887 (317.3 bits), Expect = 7.5e-89, P = 7.5e-89
Identities = 247/740 (33%), Positives = 359/740 (48%)
Query: 17 KDLPYNIGDPYP--SAWGSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLR 74
+D P+ + P S G W+ +G K GSPVSIF + A+ KRL+
Sbjct: 10 RDFPFELSPEPPEGSPPGPWALHRGRKKATGSPVSIFVYDVKPGAEEQTQVAKAAFKRLK 69
Query: 75 TVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGL 134
T+RHPNILA+ ID T+ +++VTE V PL+ +K G R+ +WGL
Sbjct: 70 TLRHPNILAY--------IDGLETEKCLHVVTEAVTPLAAYLKARTETGDLREMELSWGL 121
Query: 135 NQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYA 194
+QI KA+SFL NDC L+H NVC+++V V + +WKL D + GN GP +
Sbjct: 122 HQIVKALSFLVNDCSLIHNNVCMAAVFVDRAGEWKLGGLDYMYSAQGNG---GGPPRKGV 178
Query: 195 WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASIPK 254
+ QY P ELA AVR+ WS D W LGCLI+E+F+G L + LRN IPK
Sbjct: 179 PEL-EQYDPPELADGSGKAVREK--WSADMWRLGCLIWEVFNGP-LPRAAALRNPGKIPK 234
Query: 255 SLLPDYQRLLSSMPSRRLNSSKLIEN--SVGDFWMTEYFQNKLVDTIHFMEILNLKDSVE 312
SL+P Y L+ + P R N ++ ++N + G F N+ V+T F+E + +K+ E
Sbjct: 235 SLVPHYCELVGANPKVRPNPARFLQNCRAPGGF-----MNNRFVETNLFLEEIQIKEPAE 289
Query: 313 KDTFFRKLPNLAEQLPRQIVXXXXXXXXXXXXEFGSAAAPALTALLKMGSWLSTEEFSVK 372
K FF++L + P EFG+A A LT L K+G +LS EE+ K
Sbjct: 290 KQKFFQELSKSLDSFPEDFCRHKVLPQLLTAFEFGNAGAVVLTPLFKVGKFLSAEEYQQK 349
Query: 373 VLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTL 432
++P +VK+F+S DRA+R+ LLQ ++Q+ Q V+ Q++PHV GF DT+ +RE T+
Sbjct: 350 IVPVVVKMFSSTDRAMRIRLLQQMEQFIQYLDEPTVNTQIFPHVVHGFLDTNPAIREQTV 409
Query: 433 KSMLVLAPKLSQRTISGSLLKYLSKLQV-DEEPAIRTNTTILLGNIASHLNEGTRKRVLI 491
KSML+LAPKL++ ++ L+K+ ++LQ DE+ IR NTT+ LG I S+L+ TR RVL
Sbjct: 410 KSMLLLAPKLNEANLNVELMKHFARLQAKDEQGPIRCNTTVCLGKIGSYLSASTRHRVLT 469
Query: 492 NAFTVRALRDTFSPARGAA--------KILSYLNC-----------------DVRSKAFQ 526
+AF+ RA +D F+P+R A + S +C VR +AF+
Sbjct: 470 SAFS-RATKDPFAPSRVAGVLGFAATHNLYSMTDCAHKILPVLCGLTVDPEKSVRDQAFK 528
Query: 527 AVDQFLQIVKQYHEKTNTGDATGASSVGISSMPG-NASLLGWAMSSLTLKGKPSEQAPVA 585
A+ FL ++ E T A V +S PG + WA ++T
Sbjct: 529 AIRSFLSKLESVSEDP-TQLAEVEKDVHAASSPGVGGAAASWAGWAVT------------ 575
Query: 586 SANSITPLXXXXXXXXXVMENAINAPLRHVSSGTDFAXXXXXXXXXXXXXXXXWGEIENG 645
+S+T E N P R V G W E
Sbjct: 576 GVSSLTSKLIRAHPTAAPAET--NVPQRPVPEG--LPAPTPAPAPAPATTSGHWETQEEA 631
Query: 646 LHEDHDSDK-DGWDDIE--PLEEPKPSPVLANIQAAQKRPVSQPRPTATS--LRPKSTGK 700
+ DS D WDD + LE+ S + + SQP T+ S P+S
Sbjct: 632 KDTEEDSSAADRWDDEDWGSLEQEAESVLAQQDDWSTGGQSSQPGQTSNSGHKSPESDWS 691
Query: 701 VPKEED--DDLWGSIAAPAP 718
+ E + W + P P
Sbjct: 692 SWEAEGSWEQAWQEPSPPEP 711
|
|
| RGD|1307330 Scyl1 "SCY1-like 1 (S. cerevisiae)" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 789 (282.8 bits), Expect = 2.9e-86, Sum P(3) = 2.9e-86
Identities = 174/433 (40%), Positives = 255/433 (58%)
Query: 86 HSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLN 145
H + ID T+ ++IVTE V PL +K G +++ +WGL+QI KA+SFL
Sbjct: 73 HPNILAYIDGLETEKCLHIVTEAVTPLGTYLKARAEAGGLKEQELSWGLHQIVKALSFLV 132
Query: 146 NDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVE 205
NDC L+H NVC+++V V + +WKL D + GN GP + + QY P E
Sbjct: 133 NDCNLIHNNVCMAAVFVDKAGEWKLGGLDYMYSAQGNG---GGPPNKGIPEL-EQYDPPE 188
Query: 206 LAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASIPKSLLPDYQRLLS 265
LA S AV++ WS D W LGCLI+E+F+G L + LRN IPKSL+ Y L+
Sbjct: 189 LADSSSRAVKEK--WSADMWRLGCLIWEVFNGS-LPRATALRNPGKIPKSLVTHYCELVG 245
Query: 266 SMPSRRLNSSKLIEN--SVGDFWMTEYFQNKLVDTIHFMEILNLKDSVEKDTFFRKLPNL 323
+ P R N ++ ++N + G F N+ V+T F+E + +K+ EK FF++L
Sbjct: 246 ANPKVRPNPARFLQNCRAPGGF-----MSNRFVETNLFLEEIQIKEPAEKQKFFQELSKS 300
Query: 324 AEQLPRQIVXXXXXXXXXXXXEFGSAAAPALTALLKMGSWLSTEEFSVKVLPTIVKLFAS 383
+ P EFG+A A LT L K+G +LS EE+ K++P +VK+F+S
Sbjct: 301 LDSFPEDFCRHKVLPQLLTAFEFGNAGAVVLTPLFKVGKFLSAEEYQQKIIPVVVKMFSS 360
Query: 384 NDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLS 443
DRA+RV LLQ ++Q+ Q V+ Q++PHV GF DT+ +RE T+KSML+LAPKLS
Sbjct: 361 TDRAMRVRLLQQMEQFIQYLDEPTVNTQIFPHVTHGFLDTNPAIREQTVKSMLLLAPKLS 420
Query: 444 QRTISGSLLKYLSKLQV-DEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDT 502
+ ++ LLK+ ++LQ D++ IR NTT+ LG I S+L+ TR RVL +AF+ RA +D
Sbjct: 421 ETNLNVELLKHFARLQAKDDQGPIRCNTTVCLGKIGSYLSASTRHRVLTSAFS-RATKDP 479
Query: 503 FSPARGAAKILSY 515
F+P+R A +L +
Sbjct: 480 FAPSR-VAGVLGF 491
|
|
| UNIPROTKB|Q5M9F8 Scyl1 "N-terminal kinase-like protein" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 789 (282.8 bits), Expect = 2.9e-86, Sum P(3) = 2.9e-86
Identities = 174/433 (40%), Positives = 255/433 (58%)
Query: 86 HSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLN 145
H + ID T+ ++IVTE V PL +K G +++ +WGL+QI KA+SFL
Sbjct: 73 HPNILAYIDGLETEKCLHIVTEAVTPLGTYLKARAEAGGLKEQELSWGLHQIVKALSFLV 132
Query: 146 NDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVE 205
NDC L+H NVC+++V V + +WKL D + GN GP + + QY P E
Sbjct: 133 NDCNLIHNNVCMAAVFVDKAGEWKLGGLDYMYSAQGNG---GGPPNKGIPEL-EQYDPPE 188
Query: 206 LAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASIPKSLLPDYQRLLS 265
LA S AV++ WS D W LGCLI+E+F+G L + LRN IPKSL+ Y L+
Sbjct: 189 LADSSSRAVKEK--WSADMWRLGCLIWEVFNGS-LPRATALRNPGKIPKSLVTHYCELVG 245
Query: 266 SMPSRRLNSSKLIEN--SVGDFWMTEYFQNKLVDTIHFMEILNLKDSVEKDTFFRKLPNL 323
+ P R N ++ ++N + G F N+ V+T F+E + +K+ EK FF++L
Sbjct: 246 ANPKVRPNPARFLQNCRAPGGF-----MSNRFVETNLFLEEIQIKEPAEKQKFFQELSKS 300
Query: 324 AEQLPRQIVXXXXXXXXXXXXEFGSAAAPALTALLKMGSWLSTEEFSVKVLPTIVKLFAS 383
+ P EFG+A A LT L K+G +LS EE+ K++P +VK+F+S
Sbjct: 301 LDSFPEDFCRHKVLPQLLTAFEFGNAGAVVLTPLFKVGKFLSAEEYQQKIIPVVVKMFSS 360
Query: 384 NDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLS 443
DRA+RV LLQ ++Q+ Q V+ Q++PHV GF DT+ +RE T+KSML+LAPKLS
Sbjct: 361 TDRAMRVRLLQQMEQFIQYLDEPTVNTQIFPHVTHGFLDTNPAIREQTVKSMLLLAPKLS 420
Query: 444 QRTISGSLLKYLSKLQV-DEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDT 502
+ ++ LLK+ ++LQ D++ IR NTT+ LG I S+L+ TR RVL +AF+ RA +D
Sbjct: 421 ETNLNVELLKHFARLQAKDDQGPIRCNTTVCLGKIGSYLSASTRHRVLTSAFS-RATKDP 479
Query: 503 FSPARGAAKILSY 515
F+P+R A +L +
Sbjct: 480 FAPSR-VAGVLGF 491
|
|
| MGI|MGI:1931787 Scyl1 "SCY1-like 1 (S. cerevisiae)" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 778 (278.9 bits), Expect = 5.9e-86, Sum P(3) = 5.9e-86
Identities = 171/433 (39%), Positives = 253/433 (58%)
Query: 86 HSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLN 145
H + ID T+ ++IVTE V PL +K G +++ +WGL+QI KA+SFL
Sbjct: 73 HPNILAYIDGLETEKCLHIVTEAVTPLGTYLKARAEAGGLKEQELSWGLHQIVKALSFLV 132
Query: 146 NDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVE 205
NDC L+H NVC+++V V + +WKL D + GN GP + + QY P E
Sbjct: 133 NDCNLIHNNVCMAAVFVDRAGEWKLGGLDYMYSAQGNG---GGPPSKGIPEL-EQYDPPE 188
Query: 206 LAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASIPKSLLPDYQRLLS 265
LA S AVR+ WS D W LGCLI+E+F+G L + LRN IPKSL+ Y L+
Sbjct: 189 LADSSSRAVREK--WSADMWRLGCLIWEVFNGS-LPRAAALRNPGKIPKSLVTHYCELVG 245
Query: 266 SMPSRRLNSSKLIEN--SVGDFWMTEYFQNKLVDTIHFMEILNLKDSVEKDTFFRKLPNL 323
+ P R N ++ ++N + G F N+ V+T F+E + +K+ EK FF++L
Sbjct: 246 ANPKVRPNPARFLQNCRAPGGF-----MSNRFVETNLFLEEIQIKEPAEKQKFFQELSKS 300
Query: 324 AEQLPRQIVXXXXXXXXXXXXEFGSAAAPALTALLKMGSWLSTEEFSVKVLPTIVKLFAS 383
+ P EFG+A A LT L K+G L EE+ K++P +VK+F+S
Sbjct: 301 LDSFPEDFCRHKVLPQLLTAFEFGNAGAVVLTPLFKVGKSLRAEEYQEKIIPVVVKMFSS 360
Query: 384 NDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLS 443
DRA+R+ LLQ ++Q+ Q V+ Q++PHV GF DT+ +RE T+KSML+LAPKL+
Sbjct: 361 TDRAMRIRLLQQMEQFIQYLDEPTVNTQIFPHVTHGFLDTNPAIREQTVKSMLLLAPKLN 420
Query: 444 QRTISGSLLKYLSKLQV-DEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDT 502
+ ++ L+K+ ++LQ D++ IR NTT+ LG I S+L+ TR RVL +AF+ RA +D
Sbjct: 421 EANLNVELMKHFARLQAKDDQGPIRCNTTVCLGKIGSYLSASTRHRVLTSAFS-RATKDP 479
Query: 503 FSPARGAAKILSY 515
F+P+R A +L +
Sbjct: 480 FAPSR-VAGVLGF 491
|
|
| UNIPROTKB|E9PK59 SCYL1 "N-terminal kinase-like protein" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 782 (280.3 bits), Expect = 1.2e-85, Sum P(3) = 1.2e-85
Identities = 172/433 (39%), Positives = 254/433 (58%)
Query: 86 HSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLN 145
H + ID T+ +++VTE V PL +K G ++ +WGL+QI KA+SFL
Sbjct: 73 HPNILAYIDGLETEKCLHVVTEAVTPLGIYLKARVEAGGLKELEISWGLHQIVKALSFLV 132
Query: 146 NDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVE 205
NDC L+H NVC+++V V + +WKL D + GN GP + + QY P E
Sbjct: 133 NDCSLIHNNVCMAAVFVDRAGEWKLGGLDYMYSAQGNG---GGPPRKGIPEL-EQYDPPE 188
Query: 206 LAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASIPKSLLPDYQRLLS 265
LA S VR+ WS D W LGCLI+E+F+G L + LRN IPK+L+P Y L+
Sbjct: 189 LADSSGRVVREK--WSADMWRLGCLIWEVFNGP-LPRAAALRNPGKIPKTLVPHYCELVG 245
Query: 266 SMPSRRLNSSKLIEN--SVGDFWMTEYFQNKLVDTIHFMEILNLKDSVEKDTFFRKLPNL 323
+ P R N ++ ++N + G F N+ V+T F+E + +K+ EK FF++L
Sbjct: 246 ANPKVRPNPARFLQNCRAPGGF-----MSNRFVETNLFLEEIQIKEPAEKQKFFQELSKS 300
Query: 324 AEQLPRQIVXXXXXXXXXXXXEFGSAAAPALTALLKMGSWLSTEEFSVKVLPTIVKLFAS 383
+ P EFG+A A LT L K+G +LS EE+ K++P +VK+F+S
Sbjct: 301 LDAFPEDFCRHKVLPQLLTAFEFGNAGAVVLTPLFKVGKFLSAEEYQQKIIPVVVKMFSS 360
Query: 384 NDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLS 443
DRA+R+ LLQ ++Q+ Q V+ Q++PHV GF DT+ +RE T+KSML+LAPKL+
Sbjct: 361 TDRAMRIRLLQQMEQFIQYLDEPTVNTQIFPHVVHGFLDTNPAIREQTVKSMLLLAPKLN 420
Query: 444 QRTISGSLLKYLSKLQV-DEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDT 502
+ ++ L+K+ ++LQ DE+ IR NTT+ LG I S+L+ TR RVL +AF+ RA RD
Sbjct: 421 EANLNVELMKHFARLQAKDEQGPIRCNTTVCLGKIGSYLSASTRHRVLTSAFS-RATRDP 479
Query: 503 FSPARGAAKILSY 515
F+P+R A +L +
Sbjct: 480 FAPSR-VAGVLGF 491
|
|
| UNIPROTKB|E9PS17 SCYL1 "N-terminal kinase-like protein" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 782 (280.3 bits), Expect = 1.2e-85, Sum P(3) = 1.2e-85
Identities = 172/433 (39%), Positives = 254/433 (58%)
Query: 86 HSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLN 145
H + ID T+ +++VTE V PL +K G ++ +WGL+QI KA+SFL
Sbjct: 73 HPNILAYIDGLETEKCLHVVTEAVTPLGIYLKARVEAGGLKELEISWGLHQIVKALSFLV 132
Query: 146 NDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVE 205
NDC L+H NVC+++V V + +WKL D + GN GP + + QY P E
Sbjct: 133 NDCSLIHNNVCMAAVFVDRAGEWKLGGLDYMYSAQGNG---GGPPRKGIPEL-EQYDPPE 188
Query: 206 LAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASIPKSLLPDYQRLLS 265
LA S VR+ WS D W LGCLI+E+F+G L + LRN IPK+L+P Y L+
Sbjct: 189 LADSSGRVVREK--WSADMWRLGCLIWEVFNGP-LPRAAALRNPGKIPKTLVPHYCELVG 245
Query: 266 SMPSRRLNSSKLIEN--SVGDFWMTEYFQNKLVDTIHFMEILNLKDSVEKDTFFRKLPNL 323
+ P R N ++ ++N + G F N+ V+T F+E + +K+ EK FF++L
Sbjct: 246 ANPKVRPNPARFLQNCRAPGGF-----MSNRFVETNLFLEEIQIKEPAEKQKFFQELSKS 300
Query: 324 AEQLPRQIVXXXXXXXXXXXXEFGSAAAPALTALLKMGSWLSTEEFSVKVLPTIVKLFAS 383
+ P EFG+A A LT L K+G +LS EE+ K++P +VK+F+S
Sbjct: 301 LDAFPEDFCRHKVLPQLLTAFEFGNAGAVVLTPLFKVGKFLSAEEYQQKIIPVVVKMFSS 360
Query: 384 NDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLS 443
DRA+R+ LLQ ++Q+ Q V+ Q++PHV GF DT+ +RE T+KSML+LAPKL+
Sbjct: 361 TDRAMRIRLLQQMEQFIQYLDEPTVNTQIFPHVVHGFLDTNPAIREQTVKSMLLLAPKLN 420
Query: 444 QRTISGSLLKYLSKLQV-DEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDT 502
+ ++ L+K+ ++LQ DE+ IR NTT+ LG I S+L+ TR RVL +AF+ RA RD
Sbjct: 421 EANLNVELMKHFARLQAKDEQGPIRCNTTVCLGKIGSYLSASTRHRVLTSAFS-RATRDP 479
Query: 503 FSPARGAAKILSY 515
F+P+R A +L +
Sbjct: 480 FAPSR-VAGVLGF 491
|
|
| UNIPROTKB|Q96KG9 SCYL1 "N-terminal kinase-like protein" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 782 (280.3 bits), Expect = 1.2e-85, Sum P(3) = 1.2e-85
Identities = 172/433 (39%), Positives = 254/433 (58%)
Query: 86 HSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLN 145
H + ID T+ +++VTE V PL +K G ++ +WGL+QI KA+SFL
Sbjct: 73 HPNILAYIDGLETEKCLHVVTEAVTPLGIYLKARVEAGGLKELEISWGLHQIVKALSFLV 132
Query: 146 NDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVE 205
NDC L+H NVC+++V V + +WKL D + GN GP + + QY P E
Sbjct: 133 NDCSLIHNNVCMAAVFVDRAGEWKLGGLDYMYSAQGNG---GGPPRKGIPEL-EQYDPPE 188
Query: 206 LAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASIPKSLLPDYQRLLS 265
LA S VR+ WS D W LGCLI+E+F+G L + LRN IPK+L+P Y L+
Sbjct: 189 LADSSGRVVREK--WSADMWRLGCLIWEVFNGP-LPRAAALRNPGKIPKTLVPHYCELVG 245
Query: 266 SMPSRRLNSSKLIEN--SVGDFWMTEYFQNKLVDTIHFMEILNLKDSVEKDTFFRKLPNL 323
+ P R N ++ ++N + G F N+ V+T F+E + +K+ EK FF++L
Sbjct: 246 ANPKVRPNPARFLQNCRAPGGF-----MSNRFVETNLFLEEIQIKEPAEKQKFFQELSKS 300
Query: 324 AEQLPRQIVXXXXXXXXXXXXEFGSAAAPALTALLKMGSWLSTEEFSVKVLPTIVKLFAS 383
+ P EFG+A A LT L K+G +LS EE+ K++P +VK+F+S
Sbjct: 301 LDAFPEDFCRHKVLPQLLTAFEFGNAGAVVLTPLFKVGKFLSAEEYQQKIIPVVVKMFSS 360
Query: 384 NDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLS 443
DRA+R+ LLQ ++Q+ Q V+ Q++PHV GF DT+ +RE T+KSML+LAPKL+
Sbjct: 361 TDRAMRIRLLQQMEQFIQYLDEPTVNTQIFPHVVHGFLDTNPAIREQTVKSMLLLAPKLN 420
Query: 444 QRTISGSLLKYLSKLQV-DEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDT 502
+ ++ L+K+ ++LQ DE+ IR NTT+ LG I S+L+ TR RVL +AF+ RA RD
Sbjct: 421 EANLNVELMKHFARLQAKDEQGPIRCNTTVCLGKIGSYLSASTRHRVLTSAFS-RATRDP 479
Query: 503 FSPARGAAKILSY 515
F+P+R A +L +
Sbjct: 480 FAPSR-VAGVLGF 491
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| estExt_fgenesh4_pg.C_LG_XIII0446 | hypothetical protein (800 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 778 | |||
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 5e-10 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 2e-06 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 7e-06 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 8e-06 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 7e-04 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 8e-04 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 0.001 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 0.002 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 59.6 bits (145), Expect = 5e-10
Identities = 48/247 (19%), Positives = 98/247 (39%), Gaps = 45/247 (18%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
+ K G V+I I L ++ L+ + HPNI+
Sbjct: 10 YLARDKKTGKKVAIKIIK-KEDSSSLLEELLREIEILKKLNHPNIVKL--------YGVF 60
Query: 97 STKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154
+ +Y+V E L + +KE EG ++ L QI + + +L++ ++H +
Sbjct: 61 EDENHLYLVMEYCEGGSLKDLLKEN--EGKLSEDEILRILLQILEGLEYLHS-NGIIHRD 117
Query: 155 VCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVG-AQYKPVELAKSDWTA 213
+ ++++ + K+ L++F G ++ +VG Y E+
Sbjct: 118 LKPENILLDSD-NGKV----KLADF-GLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYY 171
Query: 214 VRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASIPKSLLPDYQRLLSSMPSRRLN 273
KS D W LG ++YEL EL++ L+ +++L P +R +
Sbjct: 172 SEKS-----DIWSLGVILYEL---------PELKD-------LI---RKMLQKDPEKRPS 207
Query: 274 SSKLIEN 280
+ +++E+
Sbjct: 208 AKEILEH 214
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 49.6 bits (119), Expect = 2e-06
Identities = 36/207 (17%), Positives = 84/207 (40%), Gaps = 33/207 (15%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
++ K G V++ + + + AR ++ LR + HPNI+ + + E ++
Sbjct: 16 YKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLIDAFEDKD---- 71
Query: 97 STKITIYIVTE--PVMPLSEKIKELG-LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHG 153
+Y+V E L + + G L + + QI + + +L++ ++H
Sbjct: 72 ----HLYLVMEYCEGGDLFDYLSRGGPLSEDEAKKI----ALQILRGLEYLHS-NGIIHR 122
Query: 154 NVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVG-AQYKPVELAKSDWT 212
++ ++++ + K+ F + + ++ + VG Y E+
Sbjct: 123 DLKPENILLDENGVVKIADFGLAKKLLKSSSSLTT-------FVGTPWYMAPEV------ 169
Query: 213 AVRKSPPWS--IDSWGLGCLIYELFSG 237
+ + +D W LG ++YEL +G
Sbjct: 170 -LLGGNGYGPKVDVWSLGVILYELLTG 195
|
Length = 260 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 47.9 bits (115), Expect = 7e-06
Identities = 64/271 (23%), Positives = 108/271 (39%), Gaps = 65/271 (23%)
Query: 40 TSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99
K DG + I +N + A N VK L+ + HPNI+ + ++ K
Sbjct: 20 RRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKY--------YESFEEK 71
Query: 100 ITIYIVTEPVM--PLSEKIKELGLEGS--QRDEYYAWGLNQIAKAVSFLNNDCKLVH--- 152
+ IV E LS+KIK+ EG ++ W Q+ A+ +L++ K++H
Sbjct: 72 GKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDW-FVQLCLALKYLHSR-KILHRDI 129
Query: 153 --GNVCLSS--VVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVG-AQYKPVELA 207
N+ L+S +V KL F + + A +VG Y EL
Sbjct: 130 KPQNIFLTSNGLV-------KLGDFGISKVLSSTVDLAKT-------VVGTPYYLSPELC 175
Query: 208 KSDWTAVRKSPPWS--IDSWGLGCLIYEL------FSGMRLSKTEELRN------TASIP 253
++ P++ D W LGC++YEL F G EL IP
Sbjct: 176 QNK--------PYNYKSDIWSLGCVLYELCTLKHPFEG---ENLLELALKILKGQYPPIP 224
Query: 254 KSLLPDYQRLLSSM----PSRRLNSSKLIEN 280
+ + L+SS+ P R + ++++++
Sbjct: 225 SQYSSELRNLVSSLLQKDPEERPSIAQILQS 255
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 47.5 bits (114), Expect = 8e-06
Identities = 45/248 (18%), Positives = 84/248 (33%), Gaps = 61/248 (24%)
Query: 59 QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVM--PLSEKI 116
+K L+ ++HPNI+ E E+ +Y+V E L + +
Sbjct: 37 IKKDRERILREIKILKKLKHPNIVRLYDVFEDED--------KLYLVMEYCEGGDLFDLL 88
Query: 117 KELGLEGSQRDE----YYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172
K+ G + E +Y QI A+ +L + +VH ++ ++++ + KL
Sbjct: 89 KKRG----RLSEDEARFYLR---QILSALEYL-HSKGIVHRDLKPENILLDEDGHVKLAD 140
Query: 173 FDVLSEFDGNNEAANGPM--LQYA---WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGL 227
F L+ E + +Y L+G Y D W L
Sbjct: 141 FG-LARQLDPGEKLTTFVGTPEYMAPEVLLGKGYGK----AVDI-------------WSL 182
Query: 228 GCLIYELFSGMRL-----SKTEELRNTASIPKSLLPDYQR-------LLSSM----PSRR 271
G ++YEL +G E + P L+ + P +R
Sbjct: 183 GVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWDISPEAKDLIRKLLVKDPEKR 242
Query: 272 LNSSKLIE 279
L + + ++
Sbjct: 243 LTAEEALQ 250
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 7e-04
Identities = 52/222 (23%), Positives = 86/222 (38%), Gaps = 42/222 (18%)
Query: 70 VKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPV-----MPLSEKIKELGLEGS 124
VK LR +RH NI+ +A K +Y+V E V L L +
Sbjct: 51 VKVLRQLRHENIVNLK--------EAFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAV 102
Query: 125 QRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNE 184
+ Y W Q+ +A+++ ++ ++H ++ +++V+++ KL F
Sbjct: 103 RS---YIW---QLLQAIAYCHSH-NIIHRDIKPENILVSESGVLKLCDFGFARALRARPA 155
Query: 185 AANGPMLQYA---WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL- 240
+ P+ Y W Y+ EL D P +D W +GC++ EL G L
Sbjct: 156 S---PLTDYVATRW-----YRAPELLVGD---TNYGKP--VDVWAIGCIMAELLDGEPLF 202
Query: 241 ---SKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279
S ++L L P +Q L SS P R E
Sbjct: 203 PGDSDIDQLYLIQKCLGPLPPSHQELFSSNP--RFAGVAFPE 242
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 8e-04
Identities = 51/234 (21%), Positives = 93/234 (39%), Gaps = 43/234 (18%)
Query: 66 ARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTE--PVMPLSEKIKELGLEG 123
A N ++ L +V HPNI+++ + N + IV E P LS+ I + +
Sbjct: 46 AVNEIRILASVNHPNIISYKEAFLDGNK--------LCIVMEYAPFGDLSKAISKRKKKR 97
Query: 124 SQRDEYYAWG-LNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGN 182
E W Q+ + + L+ + K++H ++ +++++ K+ +
Sbjct: 98 KLIPEQEIWRIFIQLLRGLQALH-EQKILHRDLKSANILLVANDLVKIGDLGI------- 149
Query: 183 NEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSI--DSWGLGCLIYELFSG--- 237
++ M + +G P +A W K P+S D W LGCL+YE+ +
Sbjct: 150 SKVLKKNMAKTQ--IGT---PHYMAPEVW----KGRPYSYKSDIWSLGCLLYEMATFAPP 200
Query: 238 MRLSKTEELRNTA------SIPKSLLPDYQRLLSSM----PSRRLNSSKLIENS 281
++LR IP D Q + SM P R N K++ +
Sbjct: 201 FEARSMQDLRYKVQRGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASP 254
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 41.7 bits (96), Expect = 0.001
Identities = 43/212 (20%), Positives = 81/212 (38%), Gaps = 17/212 (8%)
Query: 73 LRTVRHP-NILAFLHSTEVENIDATSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEY 129
L ++ HP NI+ + E ++Y+V E V L + +K++G +G +
Sbjct: 51 LASLNHPPNIVKLYDFFQDEG--------SLYLVMEYVDGGSLEDLLKKIGRKGPLSESE 102
Query: 130 YAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDW-KLHAFDVLSEFDGNNEAANG 188
+ L QI A+ +L+ ++H ++ ++++ + KL F + ++
Sbjct: 103 ALFILAQILSALEYLH-SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSI 161
Query: 189 PMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-ELR 247
P L + Y E+ S D W LG +YEL +G+ + E
Sbjct: 162 PALPSTSVGTPGYMAPEVLLG---LSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSS 218
Query: 248 NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279
T+ K +L L+S S
Sbjct: 219 ATSQTLKIILELPTPSLASPLSPSNPELISKA 250
|
Length = 384 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.002
Identities = 43/213 (20%), Positives = 78/213 (36%), Gaps = 45/213 (21%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
++ K G V+I I +G A +K L+ + HPNI+ L D
Sbjct: 16 YKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLL--------DVF 67
Query: 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQ-RDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154
K +Y+V E + L + IK+ + + Y + Q+ + ++F ++ ++H +
Sbjct: 68 RHKGDLYLVFEFMDTDLYKLIKDRQRGLPESLIKSYLY---QLLQGLAFCHSH-GILHRD 123
Query: 155 VCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYA---W------LVGA-QYKPV 204
+ ++++ KL F + F P Y W L+G Y
Sbjct: 124 LKPENLLINTEGVLKLADFGLARSFGSP----VRPYTHYVVTRWYRAPELLLGDKGYST- 178
Query: 205 ELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
+D W +GC+ EL S
Sbjct: 179 ----------------PVDIWSVGCIFAELLSR 195
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 778 | |||
| KOG1243 | 690 | consensus Protein kinase [General function predict | 100.0 | |
| KOG2137 | 700 | consensus Protein kinase [Signal transduction mech | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 99.98 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 99.98 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 99.98 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 99.98 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 99.98 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 99.98 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 99.98 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 99.98 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 99.98 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 99.98 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 99.98 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 99.98 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 99.98 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 99.98 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 99.98 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 99.98 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 99.98 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 99.98 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 99.98 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 99.98 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 99.98 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 99.98 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 99.97 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.97 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 99.97 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 99.97 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 99.97 | |
| PTZ00284 | 467 | protein kinase; Provisional | 99.97 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 99.97 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 99.97 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.97 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 99.97 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 99.97 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 99.97 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 99.97 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 99.97 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 99.97 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 99.97 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 99.97 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.97 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 99.97 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.97 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 99.97 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 99.97 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 99.97 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 99.97 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 99.97 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.97 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 99.97 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 99.97 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 99.97 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 99.97 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 99.97 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 99.97 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.97 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 99.97 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.97 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.97 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.97 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 99.97 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 99.97 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 99.97 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 99.97 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 99.97 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 99.97 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 99.97 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.97 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.97 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 99.97 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 99.97 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 99.97 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.97 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.97 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 99.97 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 99.97 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 99.97 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.97 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 99.97 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 99.97 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 99.97 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 99.97 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.97 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 99.97 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 99.97 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 99.97 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 99.97 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 99.97 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 99.97 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 99.97 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 99.97 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.97 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 99.97 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.97 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.97 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 99.97 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 99.97 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 99.97 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 99.97 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.97 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.97 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 99.97 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.97 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 99.97 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.97 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 99.97 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 99.97 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.97 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.97 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.97 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.97 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 99.97 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.97 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 99.97 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 99.97 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.97 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 99.97 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 99.97 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 99.97 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 99.97 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.97 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 99.97 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 99.97 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.97 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 99.97 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.97 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 99.97 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.97 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 99.97 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 99.97 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 99.97 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 99.97 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 99.97 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.97 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 99.97 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.97 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.97 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.97 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 99.97 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 99.96 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 99.96 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 99.96 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.96 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.96 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 99.96 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.96 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.96 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 99.96 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 99.96 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 99.96 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.96 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 99.96 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 99.96 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 99.96 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 99.96 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.96 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 99.96 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.96 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 99.96 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 99.96 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 99.96 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.96 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.96 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 99.96 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.96 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 99.96 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 99.96 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 99.96 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 99.96 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 99.96 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 99.96 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 99.96 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.96 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 99.96 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.96 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 99.96 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 99.96 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 99.96 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.96 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 99.96 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 99.96 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.96 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 99.96 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.96 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 99.96 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.96 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 99.96 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 99.96 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.96 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 99.96 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.96 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 99.96 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 99.96 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 99.96 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 99.96 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.96 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.96 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 99.96 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 99.96 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 99.96 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 99.96 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 99.96 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 99.95 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.95 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.95 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.95 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 99.95 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.95 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.95 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.95 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 99.95 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 99.95 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 99.95 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.95 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.95 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 99.95 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.95 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 99.95 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.95 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 99.95 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 99.94 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.94 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.94 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.94 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 99.94 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.94 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.94 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.94 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.94 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.94 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.94 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.94 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.94 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.94 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.93 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 99.93 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.93 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 99.93 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 99.92 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.92 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.92 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.92 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 99.92 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 99.92 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.92 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.92 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.92 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.91 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.91 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.9 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 99.89 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.89 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.89 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.88 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 99.87 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.85 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.83 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.82 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.81 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.78 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.77 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.75 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.72 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.7 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.68 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.68 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.66 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.64 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.62 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.62 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.57 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.55 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.54 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.54 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.51 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.51 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.51 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.45 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.43 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.42 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.42 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.39 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.38 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.33 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.31 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.29 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.22 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.18 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.14 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 98.99 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 98.97 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 98.87 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 98.86 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 98.81 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 98.77 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 98.75 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 98.6 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 98.59 | |
| KOG0211 | 759 | consensus Protein phosphatase 2A regulatory subuni | 98.48 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 98.39 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 98.32 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 98.31 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 98.3 | |
| KOG2137 | 700 | consensus Protein kinase [Signal transduction mech | 98.29 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 98.27 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 98.25 | |
| PRK09902 | 216 | hypothetical protein; Provisional | 98.11 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 98.11 | |
| COG4248 | 637 | Uncharacterized protein with protein kinase and he | 98.1 | |
| COG1718 | 268 | RIO1 Serine/threonine protein kinase involved in c | 97.8 | |
| KOG0211 | 759 | consensus Protein phosphatase 2A regulatory subuni | 97.77 | |
| PRK09687 | 280 | putative lyase; Provisional | 97.64 | |
| COG0661 | 517 | AarF Predicted unusual protein kinase [General fun | 97.53 | |
| PRK09687 | 280 | putative lyase; Provisional | 97.49 | |
| KOG2270 | 520 | consensus Serine/threonine protein kinase involved | 97.42 | |
| PF12348 | 228 | CLASP_N: CLASP N terminal; InterPro: IPR024395 Thi | 97.41 | |
| KOG1235 | 538 | consensus Predicted unusual protein kinase [Genera | 97.33 | |
| PF12717 | 178 | Cnd1: non-SMC mitotic condensation complex subunit | 97.26 | |
| PF12348 | 228 | CLASP_N: CLASP N terminal; InterPro: IPR024395 Thi | 97.26 | |
| PF06176 | 229 | WaaY: Lipopolysaccharide core biosynthesis protein | 97.23 | |
| PTZ00429 | 746 | beta-adaptin; Provisional | 97.19 | |
| PF01602 | 526 | Adaptin_N: Adaptin N terminal region; InterPro: IP | 97.16 | |
| TIGR02172 | 226 | Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou | 97.09 | |
| cd05150 | 244 | APH Aminoglycoside 3'-phosphotransferase (APH). Th | 96.87 | |
| PF01636 | 239 | APH: Phosphotransferase enzyme family This family | 96.82 | |
| PRK13800 | 897 | putative oxidoreductase/HEAT repeat-containing pro | 96.71 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 96.7 | |
| PRK13800 | 897 | putative oxidoreductase/HEAT repeat-containing pro | 96.66 | |
| cd00020 | 120 | ARM Armadillo/beta-catenin-like repeats. An approx | 96.62 | |
| KOG1820 | 815 | consensus Microtubule-associated protein [Cytoskel | 96.49 | |
| PF12755 | 97 | Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region | 96.46 | |
| PF12260 | 188 | PIP49_C: Protein-kinase domain of FAM69; InterPro: | 96.44 | |
| PRK09550 | 401 | mtnK methylthioribose kinase; Reviewed | 96.4 | |
| COG2112 | 201 | Predicted Ser/Thr protein kinase [Signal transduct | 96.39 | |
| PF02985 | 31 | HEAT: HEAT repeat; InterPro: IPR000357 The HEAT re | 96.39 | |
| PF10707 | 199 | YrbL-PhoP_reg: PhoP regulatory network protein Yrb | 96.14 | |
| PF12755 | 97 | Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region | 96.13 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 96.12 | |
| PF01602 | 526 | Adaptin_N: Adaptin N terminal region; InterPro: IP | 96.01 | |
| PTZ00429 | 746 | beta-adaptin; Provisional | 96.0 | |
| PF13646 | 88 | HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2I | 95.97 | |
| cd05155 | 235 | APH_ChoK_like_1 Uncharacterized bacterial proteins | 95.93 | |
| PF10508 | 503 | Proteasom_PSMB: Proteasome non-ATPase 26S subunit; | 95.92 | |
| TIGR01767 | 370 | MTRK 5-methylthioribose kinase. This enzyme is inv | 95.76 | |
| PRK12396 | 409 | 5-methylribose kinase; Reviewed | 95.75 | |
| KOG1967 | 1030 | consensus DNA repair/transcription protein Mms19 [ | 95.73 | |
| KOG1826 | 2724 | consensus Ras GTPase activating protein RasGAP/neu | 95.73 | |
| cd00020 | 120 | ARM Armadillo/beta-catenin-like repeats. An approx | 95.65 | |
| PLN02876 | 822 | acyl-CoA dehydrogenase | 95.6 | |
| PLN02756 | 418 | S-methyl-5-thioribose kinase | 95.58 | |
| TIGR02721 | 256 | ycfN_thiK thiamine kinase. Members of this family | 95.31 | |
| PF13095 | 207 | FTA2: Kinetochore Sim4 complex subunit FTA2 | 95.26 |
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-99 Score=843.45 Aligned_cols=533 Identities=45% Similarity=0.740 Sum_probs=469.3
Q ss_pred CCCCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecc
Q 004025 14 AGVKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (778)
Q Consensus 14 ~~~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~ 92 (778)
.+.++|+|+| +...-++ +.|. .|+.|.++.+|+||.++.+.. ...+.++++++.||+||||||++|+++++.+.
T Consensus 8 ~~~~~fpY~l-e~~~~~~~a~~~--~~t~k~~~~~vsVF~~~~~~~--~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~ 82 (690)
T KOG1243|consen 8 DSSSQFPYDL-EETAFSSEALWP--DGTRKADGGPVSVFVYKRSNG--EVTELAKRAVKRLKTLRHPNILSYLDTTEEEG 82 (690)
T ss_pred cccccCCccc-ccccCCCccccc--ccceeccCCceEEEEEeCCCc--hhhHHHHHHHHHhhhccCchhhhhhhhhcccC
Confidence 4558999999 4443333 5554 799999999999999997655 56778999999999999999999999999853
Q ss_pred cccCCcccEEEEEecCCcChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 93 IDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
++|||||+|.||..++++.+ .+++.||++||+.||.|||++|+++||||+.++|||++.|+|||+|
T Consensus 83 --------~~ylvTErV~Pl~~~lk~l~------~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLgg 148 (690)
T KOG1243|consen 83 --------TLYLVTERVRPLETVLKELG------KEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGG 148 (690)
T ss_pred --------ceEEEeeccccHHHHHHHhH------HHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEee
Confidence 89999999999999999876 6779999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhccCCC
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASI 252 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~~~~i 252 (778)
|++++.....+. ..++.+.. ..|..|+.+.. ..+..|+|.|||+++|+|+| .+-....+.+...|
T Consensus 149 le~v~~~~~~~~-----~~~~~~~~-~s~~~P~~~~~--------s~~s~D~~~Lg~li~el~ng-~~~~~~~~~~~~~i 213 (690)
T KOG1243|consen 149 LELVSKASGFNA-----PAKSLYLI-ESFDDPEEIDP--------SEWSIDSWGLGCLIEELFNG-SLLTKTDLSNTGKI 213 (690)
T ss_pred eEEEeccccCCc-----ccccchhh-hcccChhhcCc--------cccchhhhhHHHHHHHHhCc-ccCcchhhhccCcc
Confidence 999988766432 11111111 14666766543 22689999999999999999 55566778888999
Q ss_pred CcchHHHHHHHhccCCCCCCChHHHHhcccCCccccccccchhhhhhHHhhhcccCChhhHhHhhhhchhhhcCCChhhh
Q 004025 253 PKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQNKLVDTIHFMEILNLKDSVEKDTFFRKLPNLAEQLPRQIV 332 (778)
Q Consensus 253 P~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff~n~lv~~~~~Le~l~~k~~~EK~~F~~~L~~~l~~fp~~~~ 332 (778)
|+.....+++.+-..+..|+....++..++ -.++||+|.++.++.||+++.+|+.+||..||+.|.+.++.||++++
T Consensus 214 pk~~~~~~~k~~~~~~~~r~n~~~~~~~~~---~~~gff~n~fvd~~~fLeel~lks~~eK~~Ff~~L~~~l~~~pe~i~ 290 (690)
T KOG1243|consen 214 PKALIELYCKKLGATELKRPNKLRFILECR---LLGGFFRNDFVDTLLFLEELRLKSVEEKQKFFSGLIDRLDNFPEEII 290 (690)
T ss_pred chhHHHHHHHHhccccccccchhhHHHHHH---hccccccchHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhhhhHHHH
Confidence 999999998888889999999888888764 34689999999999999999999999999999999999999999999
Q ss_pred hhchHHHHHHHHhhCCCCchhhHHHHHhccCCChhhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcc
Q 004025 333 LKKLLPLLASALEFGSAAAPALTALLKMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQV 412 (778)
Q Consensus 333 ~~kILP~Ll~~~~~~~~~~~~L~~llki~~~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I 412 (778)
.+||+|.|+.+++++.+++.+|.|+|++++.++.++|+.+|.|+|++||+++||+||+.||+|++.|+++|++++++++|
T Consensus 291 ~~kvlp~Ll~~~~~g~a~~~~ltpl~k~~k~ld~~eyq~~i~p~l~kLF~~~Dr~iR~~LL~~i~~~i~~Lt~~~~~d~I 370 (690)
T KOG1243|consen 291 ASKVLPILLAALEFGDAASDFLTPLFKLGKDLDEEEYQVRIIPVLLKLFKSPDRQIRLLLLQYIEKYIDHLTKQILNDQI 370 (690)
T ss_pred HHHHHHHHHHHhhccccchhhhhHHHHhhhhccccccccchhhhHHHHhcCcchHHHHHHHHhHHHHhhhcCHHhhcchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHH
Q 004025 413 YPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLIN 492 (778)
Q Consensus 413 ~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~ 492 (778)
|||+..||.|+++.|||+|||+|+.|+|||+++++|+||||+|+++|.|++++||||||||||||++||.+..|++||+.
T Consensus 371 ~phv~~G~~DTn~~Lre~Tlksm~~La~kL~~~~Ln~Ellr~~ar~q~d~~~~irtntticlgki~~~l~~~~R~~vL~~ 450 (690)
T KOG1243|consen 371 FPHVALGFLDTNATLREQTLKSMAVLAPKLSKRNLNGELLRYLARLQPDEHGGIRTNTTICLGKIAPHLAASVRKRVLAS 450 (690)
T ss_pred HHHHHhhcccCCHHHHHHHHHHHHHHHhhhchhhhcHHHHHHHHhhCccccCcccccceeeecccccccchhhhccccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhcCCCchhhhheeee-----cc--------------------CCHHHHHHHHHHHHHHHHHHHHHH-hhcCCCC
Q 004025 493 AFTVRALRDTFSPARGAAKIL-----SY--------------------LNCDVRSKAFQAVDQFLQIVKQYH-EKTNTGD 546 (778)
Q Consensus 493 af~~~~lkD~f~~~R~A~l~a-----~~--------------------~~~~VR~~a~~~~~~~l~~l~~~~-~~~~~~~ 546 (778)
||+ |+|||||+|+|.|++.+ +| +++.||++|+++++.|++++|+.+ +.+..++
T Consensus 451 aft-ralkdpf~paR~a~v~~l~at~~~~~~~~va~kIlp~l~pl~vd~e~~vr~~a~~~i~~fl~kl~~~~~~~~~~ge 529 (690)
T KOG1243|consen 451 AFT-RALKDPFVPARKAGVLALAATQEYFDQSEVANKILPSLVPLTVDPEKTVRDTAEKAIRQFLEKLEKVSPESTEAGE 529 (690)
T ss_pred hhh-hhhcCCCCCchhhhhHHHhhcccccchhhhhhhccccccccccCcccchhhHHHHHHHHHHhhhhhhccccccccc
Confidence 999 99999999999999999 23 899999999999999999999997 4444333
Q ss_pred CCCCCCCCCCCCCCchhhHHHHHHhhccCCCCCCCCCcccCC
Q 004025 547 ATGASSVGISSMPGNASLLGWAMSSLTLKGKPSEQAPVASAN 588 (778)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~wa~~~~~~~~~~~~~~~~~~~~ 588 (778)
..++ .....++...|+||++++++.|+++ .++..++.+
T Consensus 530 ~~~s---~~~~~~~~~~~a~Wa~t~~s~~f~~-~~~~~~sp~ 567 (690)
T KOG1243|consen 530 KAAS---PVKNHPAEPVWAGWALTSLSAKFKP-PQASSASPS 567 (690)
T ss_pred eecc---ccccCCccccccccchhhhhccccC-CcccccCCC
Confidence 3211 1111234456999999999999999 544444333
|
|
| >KOG2137 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-42 Score=385.94 Aligned_cols=433 Identities=21% Similarity=0.330 Sum_probs=354.3
Q ss_pred CCCCCCCceeccCCCCCC--CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEec
Q 004025 14 AGVKDLPYNIGDPYPSAW--GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (778)
Q Consensus 14 ~~~~~~~Y~i~~~lg~g~--g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e 91 (778)
.......|++.+.++..+ +.|++|.|+.+..+.+.-.+.... ..+.+...-+.+||| .+
T Consensus 32 ~~~~~~~~~~~~~~~~~g~g~~~~ly~~~~~~sk~~~~~~s~~~--------~~ld~~~~~~~~lr~------~~----- 92 (700)
T KOG2137|consen 32 GPKESQSYRSLNQVGSAGPGDAWKLYAGKKSGSKAPTLKKSAVV--------WMLDKRASSLQQLRG------LD----- 92 (700)
T ss_pred CcccccccccccceeecCCCchhhhhhhhccCccCccccceeee--------eecChhhhHHHHHhc------cc-----
Confidence 334556799999888765 789999999887776652222211 111222233455666 11
Q ss_pred ccccCCcccEEEEEecCCcChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 92 NIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
.+...||-. -..+.+++.||.|+|+++++||+||.|++|+++.+|.|||+
T Consensus 93 ---------~vs~aTe~~---------------------f~nl~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~ 142 (700)
T KOG2137|consen 93 ---------GVSKATEDG---------------------FANLGNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLA 142 (700)
T ss_pred ---------chhhcccHh---------------------hhhhhcccchhhhhccCcceeecccchhheeeccCcceeec
Confidence 344444432 11145566999999999999999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccC------CCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCC-CCCChh
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVG------AQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM-RLSKTE 244 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~------~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~-~p~~~~ 244 (778)
||+++....+.... +...|....+ ..|.+||++.+ ...+.++|+|||||+||.+++|+ .++...
T Consensus 143 Gf~f~v~~~~~~~~---p~~~yd~~lp~~~~~~~~f~apE~~~~------~~~~~~sd~fSlG~li~~i~~~gk~i~~a~ 213 (700)
T KOG2137|consen 143 GFSFCVNANGPTEY---PFSEYDPPLPLLLQPHLNFLAPEYLLG------TTNTPASDVFSLGVLIYTIYNGGKSIIAAN 213 (700)
T ss_pred cchhhhccCCCCcc---ccccCCCCCChhhccCcccccchhhcc------ccccccccceeeeeEEEEEecCCcchhhcc
Confidence 99999877663321 2222222221 27999999887 35677999999999999999654 433211
Q ss_pred -------h---------hhccCCCCcchHHHHHHHhccCCCCCCChHHHHhcccCCccccccccchhhhhhHHhhhcccC
Q 004025 245 -------E---------LRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQNKLVDTIHFMEILNLK 308 (778)
Q Consensus 245 -------~---------l~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff~n~lv~~~~~Le~l~~k 308 (778)
. ...-.++|.++.+.++++++.++..||++..++.. .||++..+.+++|||.+..|
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~~--------~ff~D~~~~aLrfLD~l~~k 285 (700)
T KOG2137|consen 214 GGLLSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLLLSI--------PFFSDPGLKALRFLDDLPQK 285 (700)
T ss_pred CCcchhhhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcchhhhhcc--------cccCCchhhhhhhccccccc
Confidence 0 11125799999999999999999999987776665 49999999999999999999
Q ss_pred ChhhHhHhhhhchhhhcCCChhhhhhchHHHHHHHHhhCCCCchhhHHHHHhccCCChhhhhhhhHHHHHHhhcCCh-HH
Q 004025 309 DSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSTEEFSVKVLPTIVKLFASND-RA 387 (778)
Q Consensus 309 ~~~EK~~F~~~L~~~l~~fp~~~~~~kILP~Ll~~~~~~~~~~~~L~~llki~~~l~~eef~~~i~P~i~~lF~~~D-r~ 387 (778)
++.||.+|++.|.++++.||.++..+||||.|++++......+.+|+.++.|++.++..+|..+++|.|.++|.-++ .+
T Consensus 286 dn~qKs~Flk~Ls~~ip~fp~rv~~~kiLP~L~~el~n~~~vp~~LP~v~~i~~~~s~~~~~~~~~p~l~pi~~~~~~~~ 365 (700)
T KOG2137|consen 286 DNSQKSSFLKGLSKLIPTFPARVLFQKILPTLVAELVNTKMVPIVLPLVLLIAEGLSQNEFGPKMLPALKPIYSASDPKQ 365 (700)
T ss_pred CcHHHHHHHHHHHHhhccCCHHHHHHhhhhHHHHHhccccccccccchhhhhhhccchhhhhhhhhHHHHHHhccCCccc
Confidence 99999999999999999999999999999999999988888888999999999999999999999999999999555 48
Q ss_pred HHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHHHHHHHhhccC-CCCcc
Q 004025 388 IRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVD-EEPAI 466 (778)
Q Consensus 388 iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~LL~~laklq~D-~~~~I 466 (778)
+++++++|++.+.++++++++.++|+|.|+..++|.+..|+|.+|+.++.++..|+...+.+.|||.|..+... ....|
T Consensus 366 ~~l~i~e~mdlL~~Kt~~e~~~~~IlplL~~S~~~~~~~iQ~~~L~~lptv~e~iD~~~vk~~ilP~l~~l~~~tt~~~v 445 (700)
T KOG2137|consen 366 ALLFILENMDLLKEKTPPEEVKEKILPLLYRSLEDSDVQIQELALQILPTVAESIDVPFVKQAILPRLKNLAFKTTNLYV 445 (700)
T ss_pred chhhHHhhHHHHHhhCChHHHHHHHHHHHHHHhcCcchhhHHHHHHhhhHHHHhccHHHHHHHHHHHhhcchhcccchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999865 56899
Q ss_pred hhhHHHHHHHhhhhcccccchhhhHHHHHhhh-hcCCCchhhhheeee
Q 004025 467 RTNTTILLGNIASHLNEGTRKRVLINAFTVRA-LRDTFSPARGAAKIL 513 (778)
Q Consensus 467 Rtnt~icl~kIa~~L~~~~~~~vL~~af~~~~-lkD~f~~~R~A~l~a 513 (778)
|+|++.||+.+++.++..+.-..++|.+. .. .+||-+-.+.-.|+.
T Consensus 446 kvn~L~c~~~l~q~lD~~~v~d~~lpi~~-~~~~~dp~iv~~~~~i~~ 492 (700)
T KOG2137|consen 446 KVNVLPCLAGLIQRLDKAAVLDELLPILK-CIKTRDPAIVMGFLRIYE 492 (700)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHH-HhcCCCcHHHHHHHHHHH
Confidence 99999999999999999888888888777 54 778887777666665
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=338.95 Aligned_cols=239 Identities=20% Similarity=0.262 Sum_probs=199.0
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..|+...++|+|+ | +||+|++|++|+.||||+|.-+..+....+.+.+|++.||+|+|||++.++++|..
T Consensus 2 ekYE~LgkvGEGSYG--vV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrr------- 72 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYG--VVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRR------- 72 (396)
T ss_pred cHHhhhhccccCcce--EEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHh-------
Confidence 3588899999998 9 99999999999999999998776666778889999999999999999999999976
Q ss_pred cccEEEEEecCCc-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
+..+|+|+|||. .+...|..... ....+.++.+++|++.|+.|+|. .+++||||||+||+|+.+|.+||||||++
T Consensus 73 -krklhLVFE~~dhTvL~eLe~~p~--G~~~~~vk~~l~Q~l~ai~~cHk-~n~IHRDIKPENILit~~gvvKLCDFGFA 148 (396)
T KOG0593|consen 73 -KRKLHLVFEYCDHTVLHELERYPN--GVPSELVKKYLYQLLKAIHFCHK-NNCIHRDIKPENILITQNGVVKLCDFGFA 148 (396)
T ss_pred -cceeEEEeeecchHHHHHHHhccC--CCCHHHHHHHHHHHHHHhhhhhh-cCeecccCChhheEEecCCcEEeccchhh
Confidence 458999999995 45555555432 12345677889999999999995 99999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh----hhhc----
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----ELRN---- 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~----~l~~---- 248 (778)
+.+...++ . ...++.+.+|+|||++.++ ..|...+|||++||++.||++|.++|.+. ++-.
T Consensus 149 R~L~~pgd----~--YTDYVATRWYRaPELLvGD-----tqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~kt 217 (396)
T KOG0593|consen 149 RTLSAPGD----N--YTDYVATRWYRAPELLVGD-----TQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKT 217 (396)
T ss_pred HhhcCCcc----h--hhhhhhhhhccChhhhccc-----CcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHH
Confidence 99875322 1 2235677799999999986 57889999999999999999999987532 1100
Q ss_pred -----------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -----------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -----------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+..-+.++++.||..||..|++.++++.|+
T Consensus 218 LG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~ 285 (396)
T KOG0593|consen 218 LGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHP 285 (396)
T ss_pred HcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcCh
Confidence 012223467788999999999999999999997
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-40 Score=360.98 Aligned_cols=248 Identities=20% Similarity=0.345 Sum_probs=208.6
Q ss_pred CCCceeccCCCCCCCceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
..+|..++.||.|+ .-++|.+++..+|+.||+|++.++... ....+.+.+||++.++|+|||||+++++||+.
T Consensus 17 ~~~Y~~g~~LGkGg-FA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs----- 90 (592)
T KOG0575|consen 17 SKRYKRGRFLGKGG-FARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDS----- 90 (592)
T ss_pred cceeeeeeeeccCc-ceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecC-----
Confidence 36799999999996 228999999999999999999985433 35677899999999999999999999999984
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
.++|||.|+| ++|..+++.++... +...+++++||+.||.|||+ .+|+|||||..|+|++++.++||||||
T Consensus 91 ---~nVYivLELC~~~sL~el~Krrk~lt---EpEary~l~QIv~GlkYLH~-~~IiHRDLKLGNlfL~~~~~VKIgDFG 163 (592)
T KOG0575|consen 91 ---NNVYIVLELCHRGSLMELLKRRKPLT---EPEARYFLRQIVEGLKYLHS-LGIIHRDLKLGNLFLNENMNVKIGDFG 163 (592)
T ss_pred ---CceEEEEEecCCccHHHHHHhcCCCC---cHHHHHHHHHHHHHHHHHHh-cCceecccchhheeecCcCcEEecccc
Confidence 4999999999 68999998655332 33356779999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhcc-----
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT----- 249 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~~----- 249 (778)
+++.+..+++ ..+..++++.|.|||++.. .+++..+||||+||+||.|+.|+|||++..++++
T Consensus 164 LAt~le~~~E------rk~TlCGTPNYIAPEVl~k------~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik 231 (592)
T KOG0575|consen 164 LATQLEYDGE------RKKTLCGTPNYIAPEVLNK------SGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIK 231 (592)
T ss_pred eeeeecCccc------ccceecCCCcccChhHhcc------CCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHH
Confidence 9999986532 2344577789999999885 5788899999999999999999999998876554
Q ss_pred ---CCCCc----chHHHHHHHhccCCCCCCChHHHHhcccCCccccccccc
Q 004025 250 ---ASIPK----SLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQN 293 (778)
Q Consensus 250 ---~~iP~----~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff~n 293 (778)
+.+|. ...+++.+||..||..||+++++|.|+ |+.++|+..
T Consensus 232 ~~~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~---Ff~~g~~p~ 279 (592)
T KOG0575|consen 232 LNEYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHP---FFKSGFTPA 279 (592)
T ss_pred hcCcccccccCHHHHHHHHHHhcCCcccCCCHHHHhcCH---hhhCCCcCC
Confidence 34554 456789999999999999999999997 232455543
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=343.26 Aligned_cols=236 Identities=20% Similarity=0.303 Sum_probs=199.3
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
-+|++.++||.|. + +||+|+++.++..||||.+.++.......+.+..|+++||.|+|||||.++|+++.+
T Consensus 10 ~~y~~~~~iG~Gsfa--vVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~------ 81 (429)
T KOG0595|consen 10 GDYELSREIGSGSFA--VVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDD------ 81 (429)
T ss_pred ccceehhhccCcceE--EEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecC------
Confidence 4799999999998 7 999999999999999999998876667788999999999999999999999999984
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC------CcEE
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT------LDWK 169 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~------g~~K 169 (778)
.++|+||||| |+|..||+.++.. .+..++..+.||+.||+|||. .+||||||||+||+++.. -.+|
T Consensus 82 --~~i~lVMEyC~gGDLs~yi~~~~~l---~e~t~r~Fm~QLA~alq~L~~-~~IiHRDLKPQNiLLs~~~~~~~~~~LK 155 (429)
T KOG0595|consen 82 --DFIYLVMEYCNGGDLSDYIRRRGRL---PEATARHFMQQLASALQFLHE-NNIIHRDLKPQNILLSTTARNDTSPVLK 155 (429)
T ss_pred --CeEEEEEEeCCCCCHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeeeccCCcceEEeccCCCCCCCceEE
Confidence 4999999999 6899999998643 345567779999999999995 999999999999999865 3489
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhcc
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT 249 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~~ 249 (778)
|+|||+++.+.... .....++.+-|||||++.. +.|+.++|+||+|+++|++++|++||+.....++
T Consensus 156 IADFGfAR~L~~~~-------~a~tlcGSplYMAPEV~~~------~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL 222 (429)
T KOG0595|consen 156 IADFGFARFLQPGS-------MAETLCGSPLYMAPEVIMS------QQYDAKADLWSIGTILYQCLTGKPPFDAETPKEL 222 (429)
T ss_pred ecccchhhhCCchh-------HHHHhhCCccccCHHHHHh------ccccchhhHHHHHHHHHHHHhCCCCccccCHHHH
Confidence 99999999987531 1223356679999999976 5788999999999999999999999985432221
Q ss_pred -----------C----CCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 250 -----------A----SIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 250 -----------~----~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. .+...+.+++..++..+++.|.+..+++.|+
T Consensus 223 ~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~ 269 (429)
T KOG0595|consen 223 LLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHP 269 (429)
T ss_pred HHHHhccccccCchhhhccCchhhhhhHHHhcCccccCchHHhhhhh
Confidence 1 1233456778889999999999999888776
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=345.07 Aligned_cols=239 Identities=20% Similarity=0.259 Sum_probs=195.2
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-----hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-----GHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-----~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~ 92 (778)
.-|.+.+.+|+|. | .|-.|..+.+|+.||||++.+..... ......++|+++|++|.||||++++++|+.+
T Consensus 172 d~yii~~~LGsGafg--~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~- 248 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFG--LVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVP- 248 (475)
T ss_pred ceeEeeeeecCCcee--EEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecC-
Confidence 3589999999998 8 89999999999999999999753322 1122367999999999999999999999974
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC---Cc
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT---LD 167 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~---g~ 167 (778)
.+.|||+||| |.|.+.+-..+....... +.+++|++.||.|||+ .||+||||||+||+++.+ ..
T Consensus 249 -------ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~---K~~f~Qll~avkYLH~-~GI~HRDiKPeNILl~~~~e~~l 317 (475)
T KOG0615|consen 249 -------DSSYMVLEYVEGGELFDKVVANKYLREDLG---KLLFKQLLTAVKYLHS-QGIIHRDIKPENILLSNDAEDCL 317 (475)
T ss_pred -------CceEEEEEEecCccHHHHHHhccccccchh---HHHHHHHHHHHHHHHH-cCcccccCCcceEEeccCCcceE
Confidence 4889999999 579988877765544433 4449999999999995 999999999999999876 67
Q ss_pred EEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh--
Q 004025 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-- 245 (778)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-- 245 (778)
+||.|||+++...... .....++++.|.|||++.+.-. ..++.++|+|||||++|-+++|.+||..+.
T Consensus 318 lKItDFGlAK~~g~~s-------fm~TlCGTpsYvAPEVl~~kg~---~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~ 387 (475)
T KOG0615|consen 318 LKITDFGLAKVSGEGS-------FMKTLCGTPSYVAPEVLASKGV---EYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTD 387 (475)
T ss_pred EEecccchhhccccce-------ehhhhcCCccccChhheecCCe---ecccchheeeeccceEEEEeccCCCcccccCC
Confidence 9999999999886421 1234567789999999876422 345568999999999999999999996431
Q ss_pred --hh-cc------------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 246 --LR-NT------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 246 --l~-~~------------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+. ++ .+|......++.+||..||+.|++++++|+||
T Consensus 388 ~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hp 438 (475)
T KOG0615|consen 388 PSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHP 438 (475)
T ss_pred ccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcCh
Confidence 11 11 35667788899999999999999999999998
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=352.60 Aligned_cols=244 Identities=22% Similarity=0.342 Sum_probs=209.2
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|.+.+.||.|. | +||+|++|.+.+.||||.+++....+..++.+++|+++++.|+||||+.++++||+.
T Consensus 2 e~yhv~e~iG~Gsfg--~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~------ 73 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFG--RVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETS------ 73 (808)
T ss_pred cchhHHHHhcCCccc--eeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhccc------
Confidence 4699999999999 8 999999999999999999999877777888999999999999999999999999984
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
.++++||||| ++|..+|...+..+ ++.+..+.+|++.||.|||+ .+|+|||+||.||++...|.+||||||++
T Consensus 74 --~~~~vVte~a~g~L~~il~~d~~lp---Ee~v~~~a~~LVsaL~yLhs-~rilhrd~kPqniLl~~~~~~KlcdFg~A 147 (808)
T KOG0597|consen 74 --AHLWVVTEYAVGDLFTILEQDGKLP---EEQVRAIAYDLVSALYYLHS-NRILHRDMKPQNILLEKGGTLKLCDFGLA 147 (808)
T ss_pred --ceEEEEehhhhhhHHHHHHhccCCC---HHHHHHHHHHHHHHHHHHHh-cCcccccCCcceeeecCCCceeechhhhh
Confidence 4999999999 78999998876543 45566679999999999995 99999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc--------
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN-------- 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~-------- 248 (778)
+.+.... .+ ...-.+++.|||||+..+ ..|+..+|+|||||++||++.|+|||-...+-+
T Consensus 148 r~m~~~t-----~v-ltsikGtPlYmAPElv~e------~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d 215 (808)
T KOG0597|consen 148 RAMSTNT-----SV-LTSIKGTPLYMAPELVEE------QPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKD 215 (808)
T ss_pred hhcccCc-----ee-eeeccCcccccCHHHHcC------CCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcC
Confidence 9886531 11 122245568999999987 578899999999999999999999997654322
Q ss_pred ----cCCCCcchHHHHHHHhccCCCCCCChHHHHhcccCCccccccc
Q 004025 249 ----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYF 291 (778)
Q Consensus 249 ----~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff 291 (778)
...+...+..+++.||.+||.+|+++.+++.|+ ||-+.++
T Consensus 216 ~v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~Hp---F~k~~~~ 259 (808)
T KOG0597|consen 216 PVKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHP---FWKGKIN 259 (808)
T ss_pred CCCCcccccHHHHHHHHHHhhcChhhcccHHHHhcCh---HHhhhhh
Confidence 123445678889999999999999999999998 6655443
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=334.07 Aligned_cols=235 Identities=18% Similarity=0.211 Sum_probs=198.5
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+.+..+.||.|. | +||+++|+.++..+|+|++... .++...+++.+|+++|+..+||+|++||+.|..+.
T Consensus 80 dle~~~~lG~G~gG--~V~kv~Hk~t~~i~AlK~I~~~-~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~------ 150 (364)
T KOG0581|consen 80 DLERLGVLGSGNGG--TVYKVRHKPTGKIYALKVILLN-IDPALQKQILRELEILRSCQSPYIVGFYGAFYSNG------ 150 (364)
T ss_pred HhhhhhhcccCCCc--EEEEEEEcCCCeEEEEEeeccc-CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCC------
Confidence 566677899998 8 9999999999999999999543 34456778999999999999999999999999753
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
. .++|+|||+ ++|..+++..+. ..+..+..+.+||++||.|||+..+||||||||+||+||.+|++||||||.+
T Consensus 151 ~-~isI~mEYMDgGSLd~~~k~~g~---i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS 226 (364)
T KOG0581|consen 151 E-EISICMEYMDGGSLDDILKRVGR---IPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVS 226 (364)
T ss_pred c-eEEeehhhcCCCCHHHHHhhcCC---CCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEecccccc
Confidence 1 599999999 689999987643 3355677789999999999997689999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh---------hhh
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE---------ELR 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~---------~l~ 247 (778)
..+.+. ....++++..||+||.+.+ ..|+.++||||||+.|+|++.|+.|+... .+.
T Consensus 227 ~~lvnS--------~a~tfvGT~~YMsPERi~g------~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~ 292 (364)
T KOG0581|consen 227 GILVNS--------IANTFVGTSAYMSPERISG------ESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLC 292 (364)
T ss_pred HHhhhh--------hcccccccccccChhhhcC------CcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHH
Confidence 988653 2334567779999999998 47888999999999999999998776542 011
Q ss_pred -----ccCCCCc-----chHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -----NTASIPK-----SLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -----~~~~iP~-----~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|. ++..++..||.+||.+|+++.++++|+
T Consensus 293 ~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hp 336 (364)
T KOG0581|consen 293 AIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHP 336 (364)
T ss_pred HHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCH
Confidence 1233444 488999999999999999999999999
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=336.16 Aligned_cols=244 Identities=21% Similarity=0.333 Sum_probs=205.7
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
....|+..++||+|. | .||+|++..+|+.||+|++......+.....+.+||++||+|.||||+++.+.+....
T Consensus 115 ~~~~feki~kIGeGTyg--~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~--- 189 (560)
T KOG0600|consen 115 RADSFEKIEKIGEGTYG--QVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKL--- 189 (560)
T ss_pred chHHHHHHHHhcCcchh--heeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecC---
Confidence 445699999999999 8 8999999999999999999988777777778899999999999999999999987653
Q ss_pred CCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
...+|+|+||+ -+|.-++...... ..+..|+.++.||+.||.|||. .+++|||||.+||+||.+|.+||+|||
T Consensus 190 ---~~siYlVFeYMdhDL~GLl~~p~vk--ft~~qIKc~mkQLl~Gl~~cH~-~gvlHRDIK~SNiLidn~G~LKiaDFG 263 (560)
T KOG0600|consen 190 ---SGSIYLVFEYMDHDLSGLLSSPGVK--FTEPQIKCYMKQLLEGLEYCHS-RGVLHRDIKGSNILIDNNGVLKIADFG 263 (560)
T ss_pred ---CceEEEEEecccchhhhhhcCCCcc--cChHHHHHHHHHHHHHHHHHhh-cCeeeccccccceEEcCCCCEEecccc
Confidence 24899999999 5798888775432 2344578889999999999995 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh----hhhcc-
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----ELRNT- 249 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~----~l~~~- 249 (778)
+++.+...... + ....+++.+|+|||++.+. ..|+.++|+||.||+|.|||.|++++... |+..+
T Consensus 264 LAr~y~~~~~~---~--~T~rVvTLWYRpPELLLG~-----t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIf 333 (560)
T KOG0600|consen 264 LARFYTPSGSA---P--YTSRVVTLWYRPPELLLGA-----TSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIF 333 (560)
T ss_pred ceeeccCCCCc---c--cccceEEeeccChHHhcCC-----cccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHH
Confidence 99988764321 1 2345677899999999986 68999999999999999999999987532 22111
Q ss_pred ------------------------------------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 250 ------------------------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 250 ------------------------------------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
..+|....+++..||..||.+|.++.+.|++.
T Consensus 334 klcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~se 401 (560)
T KOG0600|consen 334 KLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSE 401 (560)
T ss_pred HHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCc
Confidence 23566677889999999999999999999985
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=321.83 Aligned_cols=240 Identities=18% Similarity=0.203 Sum_probs=198.6
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEee-eeEecccccC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLH-STEVENIDAT 96 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d-~~e~e~~~g~ 96 (778)
.+|.|.++||.|. | +||++.+..+|..||.|.+.....+......+..|+.+|++|+||||++|++ .|..+
T Consensus 19 ~~y~Il~~IG~GsFg--~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~----- 91 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFG--EVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIED----- 91 (375)
T ss_pred HHHHHHHHHcCCcch--heEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhcc-----
Confidence 3599999999999 8 9999999999999999999876666666778889999999999999999998 55443
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHH-HHHHHHHHHHHHHHHHc--CC-CccccccCCCCeEEcCCCcEEE
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEY-YAWGLNQIAKAVSFLNN--DC-KLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~-i~~gl~QI~~aL~fLH~--~~-~ivH~dLkp~NI~v~~~g~~KL 170 (778)
...+|||||+| |+|.+.|+..+.......+- ++.++.|++.||..+|+ .. -++||||||.|||++.+|.+||
T Consensus 92 --~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKL 169 (375)
T KOG0591|consen 92 --NEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKL 169 (375)
T ss_pred --chhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceee
Confidence 24699999999 78999998876555444444 44558899999999997 22 3899999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc--
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN-- 248 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~-- 248 (778)
||||+++.+... .......++++.||+||.+.+ ..|+.++|+|||||++|||+.-++||..+.+-+
T Consensus 170 GDfGL~r~l~s~------~tfA~S~VGTPyYMSPE~i~~------~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~ 237 (375)
T KOG0591|consen 170 GDFGLGRFLSSK------TTFAHSLVGTPYYMSPERIHE------SGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLC 237 (375)
T ss_pred ccchhHhHhcch------hHHHHhhcCCCcccCHHHHhc------CCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHH
Confidence 999999998763 223445677889999999987 588999999999999999999999997654321
Q ss_pred -------cCCCC-----cchHHHHHHHhccCCCCCCChHHHHh
Q 004025 249 -------TASIP-----KSLLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 249 -------~~~iP-----~~L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
...+| ..+..++..|+..||..||+.-.+++
T Consensus 238 ~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~ 280 (375)
T KOG0591|consen 238 KKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQ 280 (375)
T ss_pred HHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHH
Confidence 23466 35778899999999999998644443
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=312.24 Aligned_cols=238 Identities=18% Similarity=0.280 Sum_probs=201.8
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|...+++|+|. | .||+|++..+|+.||||++...+..+.....+.+|++.|+.++||||+.++|+|...
T Consensus 3 rY~~~~~lGEG~~g--vVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~------- 73 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYG--VVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHK------- 73 (318)
T ss_pred hhhhhhhhcCcceE--EEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCC-------
Confidence 689999999999 8 999999999999999999998877777777889999999999999999999999874
Q ss_pred ccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 99 ~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
..+.||+||+ .+|...|+.....- ....|++++.|+++||.|||. ..|+||||||.|++|+++|.+||+|||+++
T Consensus 74 -~~l~lVfEfm~tdLe~vIkd~~i~l--~pa~iK~y~~m~LkGl~y~H~-~~IlHRDlKPnNLLis~~g~lKiADFGLAr 149 (318)
T KOG0659|consen 74 -SNLSLVFEFMPTDLEVVIKDKNIIL--SPADIKSYMLMTLKGLAYCHS-KWILHRDLKPNNLLISSDGQLKIADFGLAR 149 (318)
T ss_pred -CceEEEEEeccccHHHHhccccccc--CHHHHHHHHHHHHHHHHHHHh-hhhhcccCCccceEEcCCCcEEeecccchh
Confidence 4899999999 68999998876432 334488889999999999995 999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh----hhhcc----
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----ELRNT---- 249 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~----~l~~~---- 249 (778)
.+...+.. ..+ .+.+..|+|||++.|. +.|+..+||||.||++.||+.|.|+|..+ |+..+
T Consensus 150 ~f~~p~~~-----~~~-~V~TRWYRAPELLfGs-----r~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~L 218 (318)
T KOG0659|consen 150 FFGSPNRI-----QTH-QVVTRWYRAPELLFGS-----RQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRAL 218 (318)
T ss_pred ccCCCCcc-----ccc-ceeeeeccChHHhccc-----hhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHc
Confidence 98764321 111 2667799999999886 67899999999999999999999887532 22110
Q ss_pred --------------------C------------CCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 250 --------------------A------------SIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 250 --------------------~------------~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ..+....+++.+|+..||.+|+++.+.|+|+
T Consensus 219 GTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~ 282 (318)
T KOG0659|consen 219 GTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHP 282 (318)
T ss_pred CCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcch
Confidence 1 1123457788999999999999999999997
|
|
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=326.67 Aligned_cols=244 Identities=20% Similarity=0.317 Sum_probs=201.7
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
.|...+.+|.|. | .|+.++++.+|+.||||++..........++..+|++.|+.++|+||+.++|.+..+..+ .
T Consensus 23 ~y~~~~~iG~GAyG--vVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~---~ 97 (359)
T KOG0660|consen 23 YYVLIEPIGRGAYG--VVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRD---K 97 (359)
T ss_pred eecccccccCccee--eEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccc---c
Confidence 455578899998 8 899999999999999999986666666788899999999999999999999999763222 1
Q ss_pred ccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 99 ~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
-+.+|+|+|++ .+|.+.|+.... ..++.+++.+|||++||+|+|+ ++++||||||.|++++.++++|+||||+++
T Consensus 98 f~DvYiV~elMetDL~~iik~~~~---L~d~H~q~f~YQiLrgLKyiHS-AnViHRDLKPsNll~n~~c~lKI~DFGLAR 173 (359)
T KOG0660|consen 98 FNDVYLVFELMETDLHQIIKSQQD---LTDDHAQYFLYQILRGLKYIHS-ANVIHRDLKPSNLLLNADCDLKICDFGLAR 173 (359)
T ss_pred cceeEEehhHHhhHHHHHHHcCcc---ccHHHHHHHHHHHHHhcchhhc-ccccccccchhheeeccCCCEEecccccee
Confidence 46899999999 579999988652 3455678889999999999996 999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh----hhh------
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----ELR------ 247 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~----~l~------ 247 (778)
..... ...+ ...+++.+..|+|||++.+. ..|+.++||||.||++.||++|+++|.+. |+.
T Consensus 174 ~~~~~--~~~~--~mTeYVaTRWYRAPElll~~-----~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~l 244 (359)
T KOG0660|consen 174 YLDKF--FEDG--FMTEYVATRWYRAPELLLNS-----SEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELL 244 (359)
T ss_pred ecccc--Cccc--chhcceeeeeecCHHHHhcc-----ccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhc
Confidence 88653 1111 12455778899999998764 68999999999999999999999998532 111
Q ss_pred ---------------------ccC------------CCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ---------------------NTA------------SIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ---------------------~~~------------~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+.. +..+...+++.+||..||.+|+|+++.|+||
T Consensus 245 GtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hP 311 (359)
T KOG0660|consen 245 GTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHP 311 (359)
T ss_pred CCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcCh
Confidence 111 2223467889999999999999999999998
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-38 Score=336.38 Aligned_cols=240 Identities=18% Similarity=0.244 Sum_probs=201.1
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~ 94 (778)
...+|.+.+++|.|+ | .||+|+.+.+|+.||||.++++....+.. .-.+|++.|++|. |||||++.+++.+..
T Consensus 8 ~m~RY~~i~klGDGTfG--sV~la~~~~~~~~VAIK~MK~Kf~s~ee~-~nLREvksL~kln~hpniikL~Evi~d~~-- 82 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFG--SVYLAKSKETGELVAIKKMKKKFYSWEEC-MNLREVKSLRKLNPHPNIIKLKEVIRDND-- 82 (538)
T ss_pred HHHHHHHHHHhcCCcce--eEEEeeecCCCceeeHHHHHhhhccHHHH-HHHHHHHHHHhcCCCCcchhhHHHhhccC--
Confidence 457899999999999 9 99999999999999999999876654333 3458999999999 999999999998642
Q ss_pred cCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 95 ATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 95 g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..+||||||+ ..|+++++.++.. ..+..|+-+++||++||+|+| +.|+.|||+||+||+|+....+||+||
T Consensus 83 -----~~L~fVfE~Md~NLYqLmK~R~r~--fse~~irnim~QilqGL~hiH-k~GfFHRDlKPENiLi~~~~~iKiaDF 154 (538)
T KOG0661|consen 83 -----RILYFVFEFMDCNLYQLMKDRNRL--FSESDIRNIMYQILQGLAHIH-KHGFFHRDLKPENILISGNDVIKIADF 154 (538)
T ss_pred -----ceEeeeHHhhhhhHHHHHhhcCCc--CCHHHHHHHHHHHHHHHHHHH-hcCcccccCChhheEecccceeEeccc
Confidence 3899999999 6899999987432 345568888999999999999 599999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh----hhhc-
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----ELRN- 248 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~----~l~~- 248 (778)
|+|+.+... .|+.. ++-+.+|+|||++... ..|+.++|||++||+++|+++-+++|.+. ++-.
T Consensus 155 GLARev~Sk-----pPYTe--YVSTRWYRAPEvLLrs-----~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KI 222 (538)
T KOG0661|consen 155 GLAREVRSK-----PPYTE--YVSTRWYRAPEVLLRS-----GYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKI 222 (538)
T ss_pred ccccccccC-----CCcch--hhhcccccchHHhhhc-----cccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHH
Confidence 999998763 24433 3556799999998764 57899999999999999999999988531 1100
Q ss_pred -------------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -------------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+.+.+.....++.+||..||.+||++.++|+|+
T Consensus 223 c~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~p 292 (538)
T KOG0661|consen 223 CEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHP 292 (538)
T ss_pred HHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCc
Confidence 023445677889999999999999999999997
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-37 Score=335.23 Aligned_cols=248 Identities=18% Similarity=0.314 Sum_probs=203.2
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEeccccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~g 95 (778)
.+|.+|+.+|.|. + +|++|+.+.++..||||+++++..- +...+.+..|-..|.+| .||+|++++..|.++.
T Consensus 73 ~DF~Fg~~lGeGSYS--tV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~--- 147 (604)
T KOG0592|consen 73 NDFKFGKILGEGSYS--TVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEE--- 147 (604)
T ss_pred hhcchhheeccccce--eEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeeccc---
Confidence 5799999999997 7 9999999999999999999976432 23344566777788888 7999999999999854
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
.+|+|+||+ |+|.++|++.+.... ...+++..||+.||.|||+ +|||||||||+||+++.+|.+||.||
T Consensus 148 -----sLYFvLe~A~nGdll~~i~K~Gsfde---~caR~YAAeIldAleylH~-~GIIHRDlKPENILLd~dmhikITDF 218 (604)
T KOG0592|consen 148 -----SLYFVLEYAPNGDLLDLIKKYGSFDE---TCARFYAAEILDALEYLHS-NGIIHRDLKPENILLDKDGHIKITDF 218 (604)
T ss_pred -----ceEEEEEecCCCcHHHHHHHhCcchH---HHHHHHHHHHHHHHHHHHh-cCceeccCChhheeEcCCCcEEEeec
Confidence 899999999 789999999875433 3345669999999999995 99999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCc----c---ccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh
Q 004025 174 DVLSEFDGNNEAANGPM----L---QYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL 246 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~----~---~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l 246 (778)
|-+..+.........+. . ...++++-.|.+||++..+ ..+..+|+|+|||+||.|+.|.+||...+-
T Consensus 219 GsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~------~~~~~sDiWAlGCilyQmlaG~PPFra~Ne 292 (604)
T KOG0592|consen 219 GSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDS------PAGPSSDLWALGCILYQMLAGQPPFRAANE 292 (604)
T ss_pred cccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCC------CCCcccchHHHHHHHHHHhcCCCCCccccH
Confidence 99988865432211111 1 1335666699999999874 567899999999999999999999975421
Q ss_pred ----hc--------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcccCCccccccccch
Q 004025 247 ----RN--------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQNK 294 (778)
Q Consensus 247 ----~~--------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff~n~ 294 (778)
+. ...+|+...++++++|..||..|+++.++.+|+ ||.+.
T Consensus 293 yliFqkI~~l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~Hp--------FF~~V 344 (604)
T KOG0592|consen 293 YLIFQKIQALDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHP--------FFEGV 344 (604)
T ss_pred HHHHHHHHHhcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhCc--------ccccC
Confidence 11 245777889999999999999999999999997 77664
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-37 Score=322.83 Aligned_cols=239 Identities=18% Similarity=0.280 Sum_probs=200.9
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
....|++.+.||.|+ | +||.++++++++.+|+|++.++...+ ...+..++|..+|.+++||.|++++..|.+.
T Consensus 23 ~~~dF~~lkviGkG~fG--kV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~--- 97 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFG--KVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTE--- 97 (357)
T ss_pred ChhheeeeeeeeccCCc--eEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccC---
Confidence 345799999999998 7 99999999999999999999875443 3577889999999999999999999999984
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+|+|+||+ |.|..+|++.+... +...+.++..|+.||.|||+ .+||||||||+||+++.+|.++|+|
T Consensus 98 -----~kLylVld~~~GGeLf~hL~~eg~F~---E~~arfYlaEi~lAL~~LH~-~gIiyRDlKPENILLd~~GHi~LtD 168 (357)
T KOG0598|consen 98 -----EKLYLVLDYLNGGELFYHLQREGRFS---EDRARFYLAEIVLALGYLHS-KGIIYRDLKPENILLDEQGHIKLTD 168 (357)
T ss_pred -----CeEEEEEeccCCccHHHHHHhcCCcc---hhHHHHHHHHHHHHHHHHHh-CCeeeccCCHHHeeecCCCcEEEec
Confidence 4999999999 57999999766432 33456669999999999996 9999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhcc---
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT--- 249 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~~--- 249 (778)
||+|+.....+.. ...++++..|||||++.. ..++.++|+||||+++|||++|.+||..++...+
T Consensus 169 FgL~k~~~~~~~~------t~tfcGT~eYmAPEil~~------~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~ 236 (357)
T KOG0598|consen 169 FGLCKEDLKDGDA------TRTFCGTPEYMAPEILLG------KGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDK 236 (357)
T ss_pred cccchhcccCCCc------cccccCCccccChHHHhc------CCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHH
Confidence 9999866543221 223577789999999987 5889999999999999999999999976653321
Q ss_pred ---------CC-CCcchHHHHHHHhccCCCCCC----ChHHHHhcc
Q 004025 250 ---------AS-IPKSLLPDYQRLLSSMPSRRL----NSSKLIENS 281 (778)
Q Consensus 250 ---------~~-iP~~L~~~i~~lL~~dP~~Rp----s~~~lL~~~ 281 (778)
.. ++...++++++||..+|.+|. ++.++-+|+
T Consensus 237 I~~~k~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~Hp 282 (357)
T KOG0598|consen 237 ILKGKLPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHP 282 (357)
T ss_pred HhcCcCCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCc
Confidence 12 455678999999999999996 567777776
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-37 Score=315.65 Aligned_cols=240 Identities=19% Similarity=0.279 Sum_probs=199.8
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..|+...+|++|+ | .||+|+++.+++.||+|.++.....+..--...+||.+|.+++||||+.+-+++.-.+
T Consensus 76 ~efe~lnrI~EGtyG--iVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~----- 148 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYG--VVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSN----- 148 (419)
T ss_pred HHHHHHhhcccCcce--eEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccc-----
Confidence 3699999999999 9 8999999999999999999877666655555779999999999999999999998655
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
-..+||||||| .+|..++...+. ......++..+.|+++||+||| +..|+|||||++|++++..|.+|++|||++
T Consensus 149 -~d~iy~VMe~~EhDLksl~d~m~q--~F~~~evK~L~~QlL~glk~lH-~~wilHRDLK~SNLLm~~~G~lKiaDFGLA 224 (419)
T KOG0663|consen 149 -MDKIYIVMEYVEHDLKSLMETMKQ--PFLPGEVKTLMLQLLRGLKHLH-DNWILHRDLKTSNLLLSHKGILKIADFGLA 224 (419)
T ss_pred -cceeeeeHHHHHhhHHHHHHhccC--CCchHHHHHHHHHHHHHHHHHh-hceeEecccchhheeeccCCcEEecccchh
Confidence 34799999999 589999887652 2233446777999999999999 599999999999999999999999999999
Q ss_pred cccCCCCCCCCCCcccc-ccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh----hhhcc--
Q 004025 177 SEFDGNNEAANGPMLQY-AWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----ELRNT-- 249 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~-~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~----~l~~~-- 249 (778)
+.+... ...+ ..+++..|+|||++.+. ..|+.++||||+||++.|++.+.|+|... ++..+
T Consensus 225 R~ygsp-------~k~~T~lVVTLWYRaPELLLG~-----~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~ 292 (419)
T KOG0663|consen 225 REYGSP-------LKPYTPLVVTLWYRAPELLLGA-----KTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFK 292 (419)
T ss_pred hhhcCC-------cccCcceEEEeeecCHHHhcCC-----cccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHH
Confidence 998763 2233 33567799999999986 67899999999999999999999988532 22111
Q ss_pred --------------------------------------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 250 --------------------------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 250 --------------------------------------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
..+...-.+++..||..||++|.|+.+.|+|.
T Consensus 293 llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~ 362 (419)
T KOG0663|consen 293 LLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHE 362 (419)
T ss_pred HhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhccc
Confidence 01224456788999999999999999999996
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=336.51 Aligned_cols=245 Identities=18% Similarity=0.269 Sum_probs=209.2
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCC-CCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGT-NAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~-~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
-||.+|+.+|.|+ | .|..|++..+|+.+|||++.+. ...+.....+.+|+-+||.|.||||+++||++++
T Consensus 12 GpwkLgkTLG~Gstg--~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~------ 83 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTG--CVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWEN------ 83 (786)
T ss_pred cceeccccccCCCCc--eehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeecc------
Confidence 4799999999999 8 8999999999999999999986 3344556678899999999999999999999997
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
+.++|+|.||+ |.|+++|-.++..... + -+.++.||+.|+.|||. .+|+||||||+|++++.++++||+|||
T Consensus 84 --~~~lylvlEyv~gGELFdylv~kG~l~e~--e-aa~ff~QIi~gv~yCH~-~~icHRDLKpENlLLd~~~nIKIADFG 157 (786)
T KOG0588|consen 84 --KQHLYLVLEYVPGGELFDYLVRKGPLPER--E-AAHFFRQILDGVSYCHA-FNICHRDLKPENLLLDVKNNIKIADFG 157 (786)
T ss_pred --CceEEEEEEecCCchhHHHHHhhCCCCCH--H-HHHHHHHHHHHHHHHhh-hcceeccCCchhhhhhcccCEeeeccc
Confidence 45999999999 5799988887654332 2 23449999999999995 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhcc-----
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT----- 249 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~~----- 249 (778)
++..-..+ .+ --..++.++|.+||++.+. .+.+.++|+||.|+++|.|++|+.||++++++.+
T Consensus 158 MAsLe~~g------kl-LeTSCGSPHYA~PEIV~G~-----pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~ 225 (786)
T KOG0588|consen 158 MASLEVPG------KL-LETSCGSPHYAAPEIVSGR-----PYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQ 225 (786)
T ss_pred eeecccCC------cc-ccccCCCcccCCchhhcCC-----CCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHH
Confidence 99765442 12 2234677899999999984 5677899999999999999999999998877653
Q ss_pred -------CCCCcchHHHHHHHhccCCCCCCChHHHHhcccCCccccccccc
Q 004025 250 -------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQN 293 (778)
Q Consensus 250 -------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff~n 293 (778)
..||...++++++||..||.+|++.+++++|| |+.+|-.-
T Consensus 226 ~G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP----~l~g~~~~ 272 (786)
T KOG0588|consen 226 RGVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHP----FLSGYTSL 272 (786)
T ss_pred cCcccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCc----hhhcCCCC
Confidence 46778889999999999999999999999999 77766543
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=326.27 Aligned_cols=244 Identities=21% Similarity=0.291 Sum_probs=201.1
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc---hhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEec
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ---DGHLAAARNGVKRLRTVR-HPNILAFLHSTEVE 91 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~---~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e 91 (778)
..-+|.+++.+|.|. | +|+.|++..+|..||||+++++... ....+.+.+|+.+++.++ ||||+++++++++.
T Consensus 15 ~~g~y~~~~~lG~Gsfg--kV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~ 92 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFG--KVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATP 92 (370)
T ss_pred ccCceeeeeeecCCCCe--eEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecC
Confidence 345799999999998 8 9999999999999999988875221 234567889999999999 99999999999985
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC-CcE
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT-LDW 168 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~-g~~ 168 (778)
+ .+||||||| +.|.+++.+.+... +...+.+++||+.|+.|||+ .+|+||||||+||+++.+ +++
T Consensus 93 ~--------~~~ivmEy~~gGdL~~~i~~~g~l~---E~~ar~~F~Qlisav~y~H~-~gi~HRDLK~ENilld~~~~~~ 160 (370)
T KOG0583|consen 93 T--------KIYIVMEYCSGGDLFDYIVNKGRLK---EDEARKYFRQLISAVAYCHS-RGIVHRDLKPENILLDGNEGNL 160 (370)
T ss_pred C--------eEEEEEEecCCccHHHHHHHcCCCC---hHHHHHHHHHHHHHHHHHHh-CCEeeCCCCHHHEEecCCCCCE
Confidence 4 799999999 48999998855432 24456679999999999996 899999999999999999 999
Q ss_pred EEEecccccccC-CCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh
Q 004025 169 KLHAFDVLSEFD-GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR 247 (778)
Q Consensus 169 KL~dFgla~~~~-~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~ 247 (778)
||+|||++.... ... .....++.+.|+|||++.+.+ .....++|+||+|+++|.|++|..||+.....
T Consensus 161 Kl~DFG~s~~~~~~~~-------~l~t~cGsp~Y~aPEvl~~~~----~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~ 229 (370)
T KOG0583|consen 161 KLSDFGLSAISPGEDG-------LLKTFCGSPAYAAPEVLSGKG----TYSGKAADVWSLGVILYVLLCGRLPFDDSNVP 229 (370)
T ss_pred EEeccccccccCCCCC-------cccCCCCCcccCCHHHhCCCC----CcCCchhhhhhhHHHHHHHHhCCCCCCCccHH
Confidence 999999998874 211 122346777999999998742 13468999999999999999999999875532
Q ss_pred --------ccCCCCcch-----HHHHHHHhccCCCCCCChHHHHhcccCCccccc
Q 004025 248 --------NTASIPKSL-----LPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTE 289 (778)
Q Consensus 248 --------~~~~iP~~L-----~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ 289 (778)
....+|..+ ..++.+||..||.+|+++.++++|+ |++.
T Consensus 230 ~l~~ki~~~~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~----w~~~ 280 (370)
T KOG0583|consen 230 NLYRKIRKGEFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEHP----WFQK 280 (370)
T ss_pred HHHHHHhcCCccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhCh----hhcc
Confidence 224555554 8889999999999999999999998 6654
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=313.50 Aligned_cols=245 Identities=19% Similarity=0.255 Sum_probs=204.6
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
....|++.+.||.|. + +||.|+.+..++.||||+++....++. +..+++|++.|+.++||||++++.+|..++
T Consensus 24 n~~~YeL~e~IG~G~sa--~V~~A~c~p~~e~VAIK~inLEkc~~~-ld~l~kE~~~msl~~HPNIv~~~~sFvv~~--- 97 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASA--VVYLARCIPTNEVVAIKIINLEKCNND-LDALRKEVQTMSLIDHPNIVTYHCSFVVDS--- 97 (516)
T ss_pred CccceeEEEEEecccee--EeeeeeecccCCEEEEEEeehhhhhhh-HHHHHHHHHHhhhcCCCCcceEEEEEEecc---
Confidence 345799999999998 6 899999999999999999998765554 788999999999999999999999999854
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
.+|+||.|+ |++.+.++..-..+ ..+..|+.+++++++||.|||. .|.||||||+.||+|+.+|.+||+||
T Consensus 98 -----~LWvVmpfMa~GS~ldIik~~~~~G-l~E~~Ia~iLre~LkaL~YLH~-~G~IHRdvKAgnILi~~dG~VkLadF 170 (516)
T KOG0582|consen 98 -----ELWVVMPFMAGGSLLDIIKTYYPDG-LEEASIATILREVLKALDYLHQ-NGHIHRDVKAGNILIDSDGTVKLADF 170 (516)
T ss_pred -----eeEEeehhhcCCcHHHHHHHHcccc-ccHHHHHHHHHHHHHHHHHHHh-cCceecccccccEEEcCCCcEEEcCc
Confidence 899999998 78999998865444 3455688889999999999995 99999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccc-cccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-------
Q 004025 174 DVLSEFDGNNEAANGPMLQ-YAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE------- 245 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~-~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~------- 245 (778)
|....+...+.. .... ..+.+.+.||+||++.... .+|+.++||||||+...|+.+|..||....
T Consensus 171 gvsa~l~~~G~R---~~~rf~tfvgtp~wmAPEvl~q~~----~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~ 243 (516)
T KOG0582|consen 171 GVSASLFDSGDR---QVTRFNTFVGTPCWMAPEVLMQQL----HGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLL 243 (516)
T ss_pred eeeeeecccCce---eeEeeccccCcccccChHHhhhcc----cCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHH
Confidence 998877664421 2222 3345667999999955432 589999999999999999999998885321
Q ss_pred -hh--------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 246 -LR--------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 246 -l~--------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
++ +...++++++.++..||..||.+||+++++|+|+
T Consensus 244 tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~ 294 (516)
T KOG0582|consen 244 TLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHA 294 (516)
T ss_pred HhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccH
Confidence 11 1124556788999999999999999999999997
|
|
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-35 Score=306.91 Aligned_cols=247 Identities=20% Similarity=0.300 Sum_probs=201.8
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCC-eeeEeeeeEeccccc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPN-ILAFLHSTEVENIDA 95 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPn-Ilk~~d~~e~e~~~g 95 (778)
...|+..+++|+|+ | +||+|+.+.+|+.||+|++......+.....+.+|+.+|+.|+|+| |+.++|++.+++..+
T Consensus 10 ~~~~~~~eklGeGtyg--~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~ 87 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYG--VVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHR 87 (323)
T ss_pred HHHHHHHHHhCCCCce--EEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccc
Confidence 34688899999999 8 9999999999999999999987665656667889999999999999 999999998765211
Q ss_pred CCcccEEEEEecCC-cChHHHHHHhCcC-CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV-MPLSEKIKELGLE-GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~~L~~~L~~~~~~-~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
+ ...+|+|+||+ .+|..++...... .......|+.+++||+.||.|||+ .+|+||||||+||+|+++|.+||+||
T Consensus 88 ~--~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~-~~IlHRDLKPQNlLi~~~G~lKlaDF 164 (323)
T KOG0594|consen 88 G--IGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHS-HGILHRDLKPQNLLISSSGVLKLADF 164 (323)
T ss_pred c--cceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHh-CCeecccCCcceEEECCCCcEeeecc
Confidence 1 24899999999 6899999987642 112236788889999999999996 99999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccc-cccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh----hhhc
Q 004025 174 DVLSEFDGNNEAANGPMLQYA-WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----ELRN 248 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~-~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~----~l~~ 248 (778)
|+++.+.- ++..+. -.++..|+|||++.+. ..|+..+||||+||+++||++++++|... ++..
T Consensus 165 GlAra~~i-------p~~~yt~evvTlWYRaPEvLlGs-----~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~ 232 (323)
T KOG0594|consen 165 GLARAFSI-------PMRTYTPEVVTLWYRAPEVLLGS-----TSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFR 232 (323)
T ss_pred chHHHhcC-------CcccccccEEEeeccCHHHhcCC-----CcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHH
Confidence 99996653 222232 2445589999999885 57889999999999999999999988542 1111
Q ss_pred c-----------------------------------CCCC---cchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 T-----------------------------------ASIP---KSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ~-----------------------------------~~iP---~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+ ..+| ....+++.+||..+|.+|.|+...++|+
T Consensus 233 If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~ 303 (323)
T KOG0594|consen 233 IFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHP 303 (323)
T ss_pred HHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcCh
Confidence 0 0112 2567788999999999999999999997
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=325.39 Aligned_cols=236 Identities=18% Similarity=0.232 Sum_probs=203.5
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
+...|+.-+++|.|. | .||.++...+++.|+||.++..... ..+.+.||+.+|+.++||||++|++.|-..
T Consensus 271 P~~~y~~~~kigqgaSG--~vy~A~~~~~~~~VaiK~m~l~~Q~--~keLilnEi~Vm~~~~H~NiVnfl~Sylv~---- 342 (550)
T KOG0578|consen 271 PRSKYTDFKKIGQGATG--GVYVARKISTKQEVAIKRMDLRKQP--KKELLLNEILVMRDLHHPNIVNFLDSYLVG---- 342 (550)
T ss_pred hhhhhcchhhhcccccc--ceeeeeeccCCceEEEEEEEeccCC--chhhhHHHHHHHHhccchHHHHHHHHhccc----
Confidence 667899999999999 8 8999999999999999999986543 356899999999999999999999999874
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..+++||||+ ++|.+.+....+. +..|+.++++++.||+|||+ .+|+|||||.+||+++.+|.+||+||
T Consensus 343 ----deLWVVMEym~ggsLTDvVt~~~~~----E~qIA~Icre~l~aL~fLH~-~gIiHrDIKSDnILL~~~g~vKltDF 413 (550)
T KOG0578|consen 343 ----DELWVVMEYMEGGSLTDVVTKTRMT----EGQIAAICREILQGLKFLHA-RGIIHRDIKSDNILLTMDGSVKLTDF 413 (550)
T ss_pred ----ceeEEEEeecCCCchhhhhhccccc----HHHHHHHHHHHHHHHHHHHh-cceeeeccccceeEeccCCcEEEeee
Confidence 3899999999 5798888876543 45577889999999999996 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCC-hhhh------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSK-TEEL------ 246 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~-~~~l------ 246 (778)
|+|..+..... .+...++++.|||||++.. ..|..++||||||+++.||+-|.+||- ...+
T Consensus 414 GFcaqi~~~~~------KR~TmVGTPYWMAPEVvtr------k~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLI 481 (550)
T KOG0578|consen 414 GFCAQISEEQS------KRSTMVGTPYWMAPEVVTR------KPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI 481 (550)
T ss_pred eeeeccccccC------ccccccCCCCccchhhhhh------cccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHH
Confidence 99998876432 2333456678999999876 578899999999999999999998874 2222
Q ss_pred --------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 --------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 --------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
++...+...+++++.+||..|+.+|+++.+||+|+
T Consensus 482 a~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~Hp 524 (550)
T KOG0578|consen 482 ATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHP 524 (550)
T ss_pred hhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcCh
Confidence 23356777899999999999999999999999998
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=295.68 Aligned_cols=236 Identities=16% Similarity=0.243 Sum_probs=198.4
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
.-.+|++...+|.|+ | +|+.++.+.+|.-+|+|++++...-. .+.+...||.++|+.+.||.+++++.++.+.
T Consensus 42 ~l~dfe~~~tlGtGSFG--rV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~--- 116 (355)
T KOG0616|consen 42 SLQDFERLKTLGTGSFG--RVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDN--- 116 (355)
T ss_pred chhhhhheeeeccCccc--eEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccC---
Confidence 345789999999999 9 99999999999999999999754333 5678889999999999999999999999874
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
.++||||||+ +.|..+|++.+...... .+.+..||+.||.|||+ +.|++|||||+||+++.+|.+||.|
T Consensus 117 -----~~lymvmeyv~GGElFS~Lrk~~rF~e~~---arFYAAeivlAleylH~-~~iiYRDLKPENiLlD~~G~iKitD 187 (355)
T KOG0616|consen 117 -----SNLYMVMEYVPGGELFSYLRKSGRFSEPH---ARFYAAEIVLALEYLHS-LDIIYRDLKPENLLLDQNGHIKITD 187 (355)
T ss_pred -----CeEEEEEeccCCccHHHHHHhcCCCCchh---HHHHHHHHHHHHHHHHh-cCeeeccCChHHeeeccCCcEEEEe
Confidence 4999999999 57999999876543333 34459999999999995 9999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhcc---
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT--- 249 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~~--- 249 (778)
||++..+.+. .+..++++.|+|||++.+ +.+..++|.|+||+|||||+.|.+||..++...+
T Consensus 188 FGFAK~v~~r---------T~TlCGTPeYLAPEii~s------k~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~K 252 (355)
T KOG0616|consen 188 FGFAKRVSGR---------TWTLCGTPEYLAPEIIQS------KGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEK 252 (355)
T ss_pred ccceEEecCc---------EEEecCCccccChHHhhc------CCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHH
Confidence 9999988762 344567789999999987 6888999999999999999999999865543221
Q ss_pred -----CCCC----cchHHHHHHHhccCCCCCC-----ChHHHHhcc
Q 004025 250 -----ASIP----KSLLPDYQRLLSSMPSRRL-----NSSKLIENS 281 (778)
Q Consensus 250 -----~~iP----~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~ 281 (778)
..+| ..+.+++++||+.|-.+|. ...++..|+
T Consensus 253 I~~~~v~fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~ 298 (355)
T KOG0616|consen 253 ILEGKVKFPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHP 298 (355)
T ss_pred HHhCcccCCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCc
Confidence 2344 4678889999999999994 345777786
|
|
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=313.90 Aligned_cols=246 Identities=19% Similarity=0.268 Sum_probs=192.3
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.||.|+ | .||.|+++.+|..|+||.+............+.+|+++|+.++||||+++++++...... .
T Consensus 1 ry~i~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~---~ 75 (338)
T cd07859 1 RYKIQEVIGKGSYG--VVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRR---E 75 (338)
T ss_pred CeEEEEEEeecCCe--EEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCC---C
Confidence 599999999998 8 899999999999999999875433333345678999999999999999999988654321 1
Q ss_pred ccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 99 ~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
...+|+||||| ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++.
T Consensus 76 ~~~~~lv~e~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~aL~~LH~-~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~ 151 (338)
T cd07859 76 FKDIYVVFELMESDLHQVIKANDD---LTPEHHQFFLYQLLRALKYIHT-ANVFHRDLKPKNILANADCKLKICDFGLAR 151 (338)
T ss_pred CceEEEEEecCCCCHHHHHHhccc---CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECCCCcEEEccCcccc
Confidence 24689999999 578888876432 2344566779999999999995 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh----------
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---------- 247 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~---------- 247 (778)
........ ........++..|+|||++.+.. ..++.++|+|||||++|||++|.+||......
T Consensus 152 ~~~~~~~~---~~~~~~~~~t~~y~aPE~~~~~~----~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~ 224 (338)
T cd07859 152 VAFNDTPT---AIFWTDYVATRWYRAPELCGSFF----SKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLL 224 (338)
T ss_pred ccccccCc---cccccCCCCCCCcCCHHHHhccc----cccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHh
Confidence 65432111 11112234556899999976421 24667999999999999999999888432100
Q ss_pred ---------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ---------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ---------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++.+||..+|.+||++.++++|+
T Consensus 225 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp 291 (338)
T cd07859 225 GTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADP 291 (338)
T ss_pred CCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCc
Confidence 0123556678999999999999999999999998
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-34 Score=306.67 Aligned_cols=240 Identities=18% Similarity=0.253 Sum_probs=189.4
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|++.+.||.|. | +||.|+++.+++.|+||++....... ....+.+|+.+++.++||||++++++++++
T Consensus 3 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---- 75 (303)
T cd07869 3 KADSYEKLEKLGEGSYA--TVYKGKSKVNGKLVALKVIRLQEEEG-TPFTAIREASLLKGLKHANIVLLHDIIHTK---- 75 (303)
T ss_pred ccccceEeeeEEecCCE--EEEEEEECCCCCEEEEEEeccccccc-cchhHHHHHHHHhhCCCCCcCeEEEEEecC----
Confidence 346799999999998 8 99999999999999999997543222 234577899999999999999999999864
Q ss_pred CCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+|+||||+ ++|.+++..... ....+.+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 76 ----~~~~lv~e~~~~~l~~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~-~~ivH~dlkp~Nill~~~~~~kl~Dfg 148 (303)
T cd07869 76 ----ETLTLVFEYVHTDLCQYMDKHPG--GLHPENVKLFLFQLLRGLSYIHQ-RYILHRDLKPQNLLISDTGELKLADFG 148 (303)
T ss_pred ----CeEEEEEECCCcCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECCCCCEEECCCC
Confidence 4899999999 678887765431 12344567779999999999995 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh-----hhhcc
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-----ELRNT 249 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~-----~l~~~ 249 (778)
++......... .....++..|+|||++.+. ..++.++|+|||||++|+|++|..||... .+..+
T Consensus 149 ~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~ 217 (303)
T cd07869 149 LARAKSVPSHT------YSNEVVTLWYRPPDVLLGS-----TEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERI 217 (303)
T ss_pred cceeccCCCcc------CCCCcccCCCCChHHHcCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHH
Confidence 98765432110 1122345689999997653 34667899999999999999999888531 11000
Q ss_pred ----------------------------------------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 250 ----------------------------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 250 ----------------------------------------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
..++..+.+++.+||+.||++|+|+.++++|+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~ 289 (303)
T cd07869 218 FLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHE 289 (303)
T ss_pred HHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCc
Confidence 01234567889999999999999999999998
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-34 Score=303.76 Aligned_cols=238 Identities=18% Similarity=0.255 Sum_probs=190.2
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.+|.|+ | +||+|+++.+++.|+||++......+...+.+.+|+.++++++||||++++++++.+
T Consensus 2 ~y~~~~~lg~g~~~--~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------- 72 (287)
T cd07848 2 KFEVLGVVGEGAYG--VVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRR------- 72 (287)
T ss_pred CceEEEEecccCCE--EEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecC-------
Confidence 699999999998 8 899999999999999999986544444566788999999999999999999999864
Q ss_pred ccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 99 ~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
..+||||||+ +.+...+.... .......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++.
T Consensus 73 -~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~ 148 (287)
T cd07848 73 -GKLYLVFEYVEKNMLELLEEMP--NGVPPEKVRSYIYQLIKAIHWCHK-NDIVHRDIKPENLLISHNDVLKLCDFGFAR 148 (287)
T ss_pred -CEEEEEEecCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEEcCCCcEEEeeccCcc
Confidence 3899999999 44444444322 123345567779999999999995 899999999999999999999999999998
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----h---c--
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R---N-- 248 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~---~-- 248 (778)
.+....... .....++..|+|||++.+ ..++.++|+|||||++|||++|.+||..... . .
T Consensus 149 ~~~~~~~~~-----~~~~~~~~~y~aPE~~~~------~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~ 217 (287)
T cd07848 149 NLSEGSNAN-----YTEYVATRWYRSPELLLG------APYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVL 217 (287)
T ss_pred ccccccccc-----ccccccccccCCcHHHcC------CCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhh
Confidence 764321110 111234568999999876 3567899999999999999999988853210 0 0
Q ss_pred -----------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -----------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -----------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++++||..||.+||++.++++|+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp 285 (287)
T cd07848 218 GPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHP 285 (287)
T ss_pred CCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCC
Confidence 012455688999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-34 Score=303.77 Aligned_cols=238 Identities=18% Similarity=0.260 Sum_probs=189.4
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.||.|+ | +||+|+++.++..|+||++...... .....+.+|+++++.++||||+++++++.++
T Consensus 5 ~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------ 75 (288)
T cd07871 5 ETYVKLDKLGEGTYA--TVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKNLKHANIVTLHDIIHTE------ 75 (288)
T ss_pred ccceEeeEEecCCCE--EEEEEEECCCCCEEEEEEecccccC-CcchhHHHHHHHHHhCCCCCEeeEEEEEcCC------
Confidence 4699999999998 8 8999999999999999999754322 2234577899999999999999999999864
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|+||||+ ++|..++...+.. .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 76 --~~~~lv~e~~~~~l~~~l~~~~~~--~~~~~~~~~~~qi~~aL~~LH~-~~ivH~dlkp~Nil~~~~~~~kl~DfG~~ 150 (288)
T cd07871 76 --RCLTLVFEYLDSDLKQYLDNCGNL--MSMHNVKIFMFQLLRGLSYCHK-RKILHRDLKPQNLLINEKGELKLADFGLA 150 (288)
T ss_pred --CeEEEEEeCCCcCHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEECCCCCEEECcCcce
Confidence 3899999999 5788888764321 2234456679999999999995 99999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc--------
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN-------- 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~-------- 248 (778)
......... .....++..|+|||++.+. ..++.++|+|||||++|+|++|.+||.......
T Consensus 151 ~~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~ 219 (288)
T cd07871 151 RAKSVPTKT------YSNEVVTLWYRPPDVLLGS-----TEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRL 219 (288)
T ss_pred eeccCCCcc------ccCceecccccChHHhcCC-----cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 765432110 1112345689999998653 356789999999999999999998875321100
Q ss_pred ----------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ----------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ----------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++++||..||.+|+|+.++++|+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp 286 (288)
T cd07871 220 LGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHS 286 (288)
T ss_pred hCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCC
Confidence 012345678899999999999999999999998
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=308.68 Aligned_cols=233 Identities=16% Similarity=0.185 Sum_probs=190.6
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.||.|+ | +||+|+++.+|+.|+||++...... ....+.+.+|+.+|+.++||||+++++.++++
T Consensus 2 ~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~------ 73 (291)
T cd05612 2 DLERIKTVGTGTFG--RVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQ------ 73 (291)
T ss_pred CceeeeeeecCCCe--EEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccC------
Confidence 699999999998 8 9999999999999999999754322 13456788999999999999999999998763
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
.++|+||||+ ++|.+++...+. .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~NIli~~~~~~kl~Dfg~ 147 (291)
T cd05612 74 --RFLYMLMEYVPGGELFSYLRNSGR---FSNSTGLFYASEIVCALEYLHS-KEIVYRDLKPENILLDKEGHIKLTDFGF 147 (291)
T ss_pred --CeEEEEEeCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCHHHeEECCCCCEEEEecCc
Confidence 4899999999 579999876543 2234456669999999999995 9999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh--------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~-------- 247 (778)
+....... ....++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 148 ~~~~~~~~---------~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~ 212 (291)
T cd05612 148 AKKLRDRT---------WTLCGTPEYLAPEVIQS------KGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILA 212 (291)
T ss_pred chhccCCc---------ccccCChhhcCHHHHcC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence 88764321 11234568999999876 35678999999999999999999988643211
Q ss_pred cc----CCCCcchHHHHHHHhccCCCCCCC-----hHHHHhcc
Q 004025 248 NT----ASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENS 281 (778)
Q Consensus 248 ~~----~~iP~~L~~~i~~lL~~dP~~Rps-----~~~lL~~~ 281 (778)
.. ..++..+.+++++||..||.+|++ +.++++|+
T Consensus 213 ~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~ 255 (291)
T cd05612 213 GKLEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHR 255 (291)
T ss_pred CCcCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCc
Confidence 11 234556889999999999999995 99999998
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-34 Score=311.72 Aligned_cols=254 Identities=16% Similarity=0.240 Sum_probs=206.6
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
+.-.+|++...||.|+ | .||.|++|.+|..||+|++.++..-. .+++.++.|-.+|....+|+||+++.+|.+
T Consensus 138 ~~~~DFe~Lk~IgkGAfG--eVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD--- 212 (550)
T KOG0605|consen 138 LSLDDFELLKVIGKGAFG--EVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQD--- 212 (550)
T ss_pred CCcccchhheeeccccce--eEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecC---
Confidence 3456799999999999 9 99999999999999999999875433 567889999999999999999999999987
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
+.++|+||||+ |++..+|...+.. .+++.+.++.+++.|+..||. .|+|||||||+|++|+..|++||.
T Consensus 213 -----~~~LYLiMEylPGGD~mTLL~~~~~L---~e~~arfYiaE~vlAI~~iH~-~gyIHRDIKPdNlLiD~~GHiKLS 283 (550)
T KOG0605|consen 213 -----KEYLYLIMEYLPGGDMMTLLMRKDTL---TEDWARFYIAETVLAIESIHQ-LGYIHRDIKPDNLLIDAKGHIKLS 283 (550)
T ss_pred -----CCeeEEEEEecCCccHHHHHHhcCcC---chHHHHHHHHHHHHHHHHHHH-cCcccccCChhheeecCCCCEeec
Confidence 45999999999 6899999887653 355667779999999999994 999999999999999999999999
Q ss_pred ecccccccCCCC---------------------CCCC--C------------------CccccccccCCCCCCccccccc
Q 004025 172 AFDVLSEFDGNN---------------------EAAN--G------------------PMLQYAWLVGAQYKPVELAKSD 210 (778)
Q Consensus 172 dFgla~~~~~~~---------------------~~~~--~------------------~~~~~~~~~~~~Y~aPE~~~~~ 210 (778)
|||+|..+.... +... . ..+.+..++++.|+|||++.+
T Consensus 284 DFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~- 362 (550)
T KOG0605|consen 284 DFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLG- 362 (550)
T ss_pred cccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhc-
Confidence 999986543200 0000 0 111234467789999999998
Q ss_pred cccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhcc----------------CCCCcchHHHHHHHhccCCCCCCC-
Q 004025 211 WTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT----------------ASIPKSLLPDYQRLLSSMPSRRLN- 273 (778)
Q Consensus 211 ~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~~----------------~~iP~~L~~~i~~lL~~dP~~Rps- 273 (778)
.+|...+|+|||||+||||+.|-|||..+....+ ..+.....+++.+||. ||..|+.
T Consensus 363 -----kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~ 436 (550)
T KOG0605|consen 363 -----KGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGS 436 (550)
T ss_pred -----CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCc
Confidence 5789999999999999999999999987654322 2344567889999999 9999986
Q ss_pred --hHHHHhcccCCccccccccchhhhh
Q 004025 274 --SSKLIENSVGDFWMTEYFQNKLVDT 298 (778)
Q Consensus 274 --~~~lL~~~~~~~w~~~ff~n~lv~~ 298 (778)
++++.+|| ||...-.+.
T Consensus 437 ~G~~EIK~HP--------fF~~v~W~~ 455 (550)
T KOG0605|consen 437 KGAEEIKKHP--------FFKGVDWDH 455 (550)
T ss_pred ccHHHHhcCC--------ccccCCcch
Confidence 78999998 666544433
|
|
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-34 Score=312.78 Aligned_cols=237 Identities=15% Similarity=0.212 Sum_probs=193.5
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
..-.+|++.+.||.|+ | +||+|+++.+|+.|+||++.+... .....+.+.+|+.+|+.++||||+++++.++.+
T Consensus 15 ~~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-- 90 (329)
T PTZ00263 15 WKLSDFEMGETLGTGSFG--RVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDE-- 90 (329)
T ss_pred CCchheEEEEEEEecCCe--EEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcC--
Confidence 3456799999999998 8 999999999999999999975422 123456788999999999999999999999864
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
..+|+||||+ ++|.+++..... .....+.+++.||+.||.|||+ .+++||||||+||+++.+|.+||+
T Consensus 91 ------~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~-~~ivH~dlkp~NIll~~~~~~kl~ 160 (329)
T PTZ00263 91 ------NRVYFLLEFVVGGELFTHLRKAGR---FPNDVAKFYHAELVLAFEYLHS-KDIIYRDLKPENLLLDNKGHVKVT 160 (329)
T ss_pred ------CEEEEEEcCCCCChHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCHHHEEECCCCCEEEe
Confidence 4899999999 579888876543 2344566679999999999995 999999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----h
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R 247 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~ 247 (778)
|||++....... ....++..|+|||++.+ ..++.++|+|||||++|||++|..||..... .
T Consensus 161 Dfg~~~~~~~~~---------~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~ 225 (329)
T PTZ00263 161 DFGFAKKVPDRT---------FTLCGTPEYLAPEVIQS------KGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYE 225 (329)
T ss_pred eccCceEcCCCc---------ceecCChhhcCHHHHcC------CCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 999998764321 11234568999999876 3567899999999999999999998854321 1
Q ss_pred ----cc----CCCCcchHHHHHHHhccCCCCCCC-----hHHHHhcc
Q 004025 248 ----NT----ASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENS 281 (778)
Q Consensus 248 ----~~----~~iP~~L~~~i~~lL~~dP~~Rps-----~~~lL~~~ 281 (778)
.. ..++..+.+++++||..||.+|++ +.++++|+
T Consensus 226 ~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp 272 (329)
T PTZ00263 226 KILAGRLKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHP 272 (329)
T ss_pred HHhcCCcCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCC
Confidence 11 224566889999999999999997 79999998
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=311.01 Aligned_cols=258 Identities=16% Similarity=0.203 Sum_probs=198.9
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch------------hHHHHHHHHHHHHhcCCCCCeeeEe
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD------------GHLAAARNGVKRLRTVRHPNILAFL 85 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~------------~~~~~~~~ev~~Lk~LrHPnIlk~~ 85 (778)
..|++.+.+|.|. | .|-.|++..+++.||||++.++.... ...+..++||.+||+|+||||++++
T Consensus 97 Nqy~l~~eiG~G~yG--kVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 97 NQYELIKEIGSGQYG--KVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred hheehhhhhcCCccc--eEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 4699999999999 9 89999999999999999999753211 2346889999999999999999999
Q ss_pred eeeEecccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEc
Q 004025 86 HSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT 163 (778)
Q Consensus 86 d~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~ 163 (778)
+++.+... .++|||+||| +++.+.=... .......-+.++..++.||.|||. .+||||||||+|++++
T Consensus 175 EvLDDP~s------~~~YlVley~s~G~v~w~p~d~---~els~~~Ar~ylrDvv~GLEYLH~-QgiiHRDIKPsNLLl~ 244 (576)
T KOG0585|consen 175 EVLDDPES------DKLYLVLEYCSKGEVKWCPPDK---PELSEQQARKYLRDVVLGLEYLHY-QGIIHRDIKPSNLLLS 244 (576)
T ss_pred EeecCccc------CceEEEEEeccCCccccCCCCc---ccccHHHHHHHHHHHHHHHHHHHh-cCeeccccchhheEEc
Confidence 99987663 4999999999 4443221111 112223344559999999999995 8999999999999999
Q ss_pred CCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCCh
Q 004025 164 QTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT 243 (778)
Q Consensus 164 ~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~ 243 (778)
++|.+||+|||.+.............. -....+++.|+|||++.++-. ......+.|+|+||++||.|+.|+.||-.
T Consensus 245 ~~g~VKIsDFGVs~~~~~~~~~~~d~~-L~~tvGTPAF~APE~c~~~~~--~~~~g~a~DiWalGVTLYCllfG~~PF~~ 321 (576)
T KOG0585|consen 245 SDGTVKISDFGVSNEFPQGSDEGSDDQ-LSRTVGTPAFFAPELCSGGNS--FSYSGFALDIWALGVTLYCLLFGQLPFFD 321 (576)
T ss_pred CCCcEEeeccceeeecccCCccccHHH-HhhcCCCccccchHhhcCCCC--ccccchhhhhhhhhhhHHHhhhccCCccc
Confidence 999999999999887643221111111 112467779999999877422 13456799999999999999999988865
Q ss_pred hhhhc--------cC------CCCcchHHHHHHHhccCCCCCCChHHHHhcccCCccccccccchh
Q 004025 244 EELRN--------TA------SIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQNKL 295 (778)
Q Consensus 244 ~~l~~--------~~------~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff~n~l 295 (778)
+.... .. .+...+.+++++||.+||.+|+++.++..|+ |....+..+.
T Consensus 322 ~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hp----wvt~~g~~~~ 383 (576)
T KOG0585|consen 322 DFELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHP----WVTRDGDSPQ 383 (576)
T ss_pred chHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecc----eeccCCCCCc
Confidence 43211 11 2345688999999999999999999999999 8877776653
|
|
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=303.98 Aligned_cols=241 Identities=18% Similarity=0.266 Sum_probs=196.0
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
....|+-.+.+|.|. | .||+|+..++++.||||..-.... .-.+|+++|+.++||||++++.+|......
T Consensus 22 ~~i~~~~~~liG~GsFg--~Vyq~~~~e~~~~vAIKKv~~d~r------~knrEl~im~~l~HpNIV~L~~~f~~~~~~- 92 (364)
T KOG0658|consen 22 VEISYEAVRLIGSGSFG--VVYQAKLRETEEEVAIKKVLQDKR------YKNRELQIMRKLDHPNIVRLLYFFSSSTES- 92 (364)
T ss_pred eEEEEEeeEEEeecccc--eEEEEEEcCCCceeEEEEecCCCC------cCcHHHHHHHhcCCcCeeeEEEEEEecCCC-
Confidence 345688899999999 9 999999999999999999864321 234789999999999999999999764421
Q ss_pred CCcccEEEEEecCC-cChHHHHHHhCcCCC-cchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC-CcEEEEe
Q 004025 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGS-QRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT-LDWKLHA 172 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~-~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~-g~~KL~d 172 (778)
..-++.+||||+ ..|.++++....... .....++.+.+||++||.|||+ .+|+||||||.||+||.+ |.+||||
T Consensus 93 --d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~-~~IcHRDIKPqNlLvD~~tg~LKicD 169 (364)
T KOG0658|consen 93 --DEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHS-HGICHRDIKPQNLLVDPDTGVLKICD 169 (364)
T ss_pred --chhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHh-cCcccCCCChheEEEcCCCCeEEecc
Confidence 134778999999 689999986422111 1223477779999999999996 999999999999999955 9999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh----hhhc
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----ELRN 248 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~----~l~~ 248 (778)
||.++.+..... ...+.++..|+|||++.+. ..|+.++|+||.||+|.||+-|+++|.++ ++..
T Consensus 170 FGSAK~L~~~ep-------niSYicSRyYRaPELifga-----~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~e 237 (364)
T KOG0658|consen 170 FGSAKVLVKGEP-------NISYICSRYYRAPELIFGA-----TEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVE 237 (364)
T ss_pred CCcceeeccCCC-------ceeEEEeccccCHHHHcCc-----cccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHH
Confidence 999998876422 2345677789999999986 68999999999999999999999998643 2211
Q ss_pred -------------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -------------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+|+++.+++.++|..+|.+|.++.+++.|+
T Consensus 238 Iik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~ 307 (364)
T KOG0658|consen 238 IIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHP 307 (364)
T ss_pred HHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcch
Confidence 024677888999999999999999999999997
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=301.43 Aligned_cols=240 Identities=21% Similarity=0.312 Sum_probs=203.8
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
.+|+|.+.+|.|. | +|-+++....|+.||||.+.+....+ ..+-.+++|+++|..|+||||+.+|++||..
T Consensus 53 HRyE~~etLGkGTYG--KVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENk----- 125 (668)
T KOG0611|consen 53 HRYEITETLGKGTYG--KVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENK----- 125 (668)
T ss_pred hHHHHHHHhcCCccc--ceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCC-----
Confidence 4899999999999 9 99999999999999999998765443 5677899999999999999999999999973
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+.|||||. +.|++|+.+++.... ..-..++.||+.|+.|+| +.+++|||||.+||+++.++++||+|||
T Consensus 126 ---dKIvivMEYaS~GeLYDYiSer~~LsE---rEaRhfFRQIvSAVhYCH-knrVvHRDLKLENILLD~N~NiKIADFG 198 (668)
T KOG0611|consen 126 ---DKIVIVMEYASGGELYDYISERGSLSE---REARHFFRQIVSAVHYCH-KNRVVHRDLKLENILLDQNNNIKIADFG 198 (668)
T ss_pred ---ceEEEEEEecCCccHHHHHHHhccccH---HHHHHHHHHHHHHHHHHh-hccceecccchhheeecCCCCeeeeccc
Confidence 4899999999 689999998875433 234556999999999999 5999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc----c-
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN----T- 249 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~----~- 249 (778)
++..+.+.. +...+++.+.|.+||++.+. ..-...+|.||||+|+|.|..|..||+..+... +
T Consensus 199 LSNly~~~k-------fLqTFCGSPLYASPEIvNG~-----PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs 266 (668)
T KOG0611|consen 199 LSNLYADKK-------FLQTFCGSPLYASPEIVNGT-----PYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQIS 266 (668)
T ss_pred hhhhhcccc-------HHHHhcCCcccCCccccCCC-----CCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhh
Confidence 988776532 23345777899999999884 344568999999999999999999998754332 2
Q ss_pred ------CCCCcchHHHHHHHhccCCCCCCChHHHHhcccCCcccc
Q 004025 250 ------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMT 288 (778)
Q Consensus 250 ------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~ 288 (778)
..-|....-+++.||-.||.+|.++.++-.| ||+.
T Consensus 267 ~GaYrEP~~PSdA~gLIRwmLmVNP~RRATieDiAsH----WWvN 307 (668)
T KOG0611|consen 267 RGAYREPETPSDASGLIRWMLMVNPERRATIEDIASH----WWVN 307 (668)
T ss_pred cccccCCCCCchHHHHHHHHHhcCcccchhHHHHhhh----heee
Confidence 2456778889999999999999999999888 3665
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=307.94 Aligned_cols=239 Identities=19% Similarity=0.198 Sum_probs=189.4
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCc-EEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSP-VSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~-VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+..+++.+|.|+ | +||+|..+ |+. |+||++......+...+.+.+|+.+|++|+|||||+|++++....
T Consensus 42 ~l~~~~~iG~G~~g--~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~----- 112 (362)
T KOG0192|consen 42 ELPIEEVLGSGSFG--TVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPP----- 112 (362)
T ss_pred HhhhhhhcccCCce--eEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC-----
Confidence 456677789998 8 99999997 666 999999876555544778999999999999999999999998631
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCC-ccccccCCCCeEEcCCC-cEEEEec
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCK-LVHGNVCLSSVVVTQTL-DWKLHAF 173 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~-ivH~dLkp~NI~v~~~g-~~KL~dF 173 (778)
..++|||||+ ++|..+|..... .......+..++.||++||.|||+ ++ |||||||++||+|+.++ .+||+||
T Consensus 113 --~~~~iVtEy~~~GsL~~~l~~~~~-~~l~~~~~l~~aldiArGm~YLH~-~~~iIHrDLK~~NiLv~~~~~~~KI~DF 188 (362)
T KOG0192|consen 113 --GSLCIVTEYMPGGSLSVLLHKKRK-RKLPLKVRLRIALDIARGMEYLHS-EGPIIHRDLKSDNILVDLKGKTLKIADF 188 (362)
T ss_pred --CceEEEEEeCCCCcHHHHHhhccc-CCCCHHHHHHHHHHHHHHHHHHhc-CCCeeecccChhhEEEcCCCCEEEECCC
Confidence 2689999999 689999987411 111222234459999999999996 78 99999999999999998 9999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------ 247 (778)
|+++...... .......++..|||||++.+. ...++.++|+||||+++|||++|..||......
T Consensus 189 Glsr~~~~~~------~~~~~~~GT~~wMAPEv~~~~----~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v 258 (362)
T KOG0192|consen 189 GLSREKVISK------TSMTSVAGTYRWMAPEVLRGE----KSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAV 258 (362)
T ss_pred ccceeecccc------ccccCCCCCccccChhhhcCC----CCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 9998776531 001112445699999999953 257899999999999999999999888643211
Q ss_pred ----c----cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ----N----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ----~----~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ...+|+.+..++.+||+.||.+||++.+++...
T Consensus 259 ~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l 300 (362)
T KOG0192|consen 259 VVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRL 300 (362)
T ss_pred HhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHH
Confidence 1 123677899999999999999999999887643
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-34 Score=302.78 Aligned_cols=243 Identities=19% Similarity=0.287 Sum_probs=194.1
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
...|..++.+|.|. | +||.++++++|..+|||........ ..+.+.+|+++|+.|+|||||++++......
T Consensus 16 ~~~~~~~~~lG~Gs~G--~V~l~~~~~~g~~~AvK~v~~~~~~--~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~---- 87 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFG--SVYLATNKKTGELMAVKSVELEDSP--TSESLEREIRILSRLNHPNIVQYYGSSSSRE---- 87 (313)
T ss_pred cchhhhhccccCccce--EEEEEEecCCCcceeeeeeecccch--hHHHHHHHHHHHHhCCCCCEEeeCCcccccc----
Confidence 35699999999998 8 9999999999999999999876322 2677999999999999999999999754422
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC-CCcEEEEec
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ-TLDWKLHAF 173 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~-~g~~KL~dF 173 (778)
...++|.|||+ ++|.+++++.+. ...+..++....||++||.|||+ .++|||||||+||+|+. +|.+||+||
T Consensus 88 --~~~~~i~mEy~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs-~g~vH~DiK~~NiLl~~~~~~~KlaDF 162 (313)
T KOG0198|consen 88 --NDEYNIFMEYAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHS-KGIVHCDIKPANILLDPSNGDVKLADF 162 (313)
T ss_pred --CeeeEeeeeccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHh-CCEeccCcccceEEEeCCCCeEEeccC
Confidence 12699999999 689999998763 23455677889999999999995 99999999999999999 799999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh----h--h-
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----E--L- 246 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~----~--l- 246 (778)
|++......... .-......+++.||+||++.++ .....++|+|||||++.||++|.+|+... . +
T Consensus 163 G~a~~~~~~~~~---~~~~~~~~Gtp~~maPEvi~~g-----~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ 234 (313)
T KOG0198|consen 163 GLAKKLESKGTK---SDSELSVQGTPNYMAPEVIRNG-----EVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLL 234 (313)
T ss_pred cccccccccccc---ccccccccCCccccCchhhcCC-----CcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHH
Confidence 999877641111 1112234566799999999853 12235899999999999999999887641 0 0
Q ss_pred ----hccCCCCc----chHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 ----RNTASIPK----SLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ----~~~~~iP~----~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....||. ...+++.+|+..+|..|||+.++|+|+
T Consensus 235 ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hp 277 (313)
T KOG0198|consen 235 IGREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHP 277 (313)
T ss_pred HhccCCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhCh
Confidence 01234444 457778999999999999999999998
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=307.66 Aligned_cols=230 Identities=17% Similarity=0.232 Sum_probs=185.3
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~ly 103 (778)
.||.|+ | +||+|+++.+|+.|+||++.+... .......+.+|+++|+.++||||+++++.++.. .++|
T Consensus 2 ~lG~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~--------~~~~ 71 (323)
T cd05571 2 LLGKGTFG--KVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTH--------DRLC 71 (323)
T ss_pred eeeeCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcC--------CEEE
Confidence 577887 8 999999999999999999986422 223445678899999999999999999999864 4899
Q ss_pred EEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCC
Q 004025 104 IVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (778)
Q Consensus 104 IVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~ 181 (778)
|||||+ ++|..++..... .....+.+++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|||++.....
T Consensus 72 lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~L~~lH~-~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~ 147 (323)
T cd05571 72 FVMEYANGGELFFHLSRERV---FSEDRARFYGAEIVSALGYLHS-CDVVYRDLKLENLMLDKDGHIKITDFGLCKEGIS 147 (323)
T ss_pred EEEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeEeCCCCHHHEEECCCCCEEEeeCCCCccccc
Confidence 999999 478888876542 2344566779999999999995 9999999999999999999999999999875432
Q ss_pred CCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc------------c
Q 004025 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------------T 249 (778)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~------------~ 249 (778)
... ......++..|+|||++.+ ..++.++|+|||||++|||++|..||....... .
T Consensus 148 ~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p 215 (323)
T cd05571 148 DGA------TMKTFCGTPEYLAPEVLED------NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP 215 (323)
T ss_pred CCC------cccceecCccccChhhhcC------CCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence 111 0112345668999999876 357789999999999999999998885432111 1
Q ss_pred CCCCcchHHHHHHHhccCCCCCC-----ChHHHHhcc
Q 004025 250 ASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENS 281 (778)
Q Consensus 250 ~~iP~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~ 281 (778)
..++..+.+++++||..||.+|+ ++.++++|+
T Consensus 216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~ 252 (323)
T cd05571 216 RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHR 252 (323)
T ss_pred CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCC
Confidence 34667788999999999999999 899999998
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-33 Score=296.29 Aligned_cols=240 Identities=18% Similarity=0.258 Sum_probs=192.1
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.||.|. | +||+|+++.++..|+||++......+.....+.+|+.++++++||||+++++.+..+
T Consensus 1 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 71 (285)
T cd07861 1 DYTKIEKIGEGTYG--VVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQE------- 71 (285)
T ss_pred CceEeeEecccCce--EEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeC-------
Confidence 589999999997 7 899999999999999999976544444456788999999999999999999999864
Q ss_pred ccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 99 ~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
..+|+||||+ ++|.+++.............+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++.
T Consensus 72 -~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 149 (285)
T cd07861 72 -SRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHS-RRVLHRDLKPQNLLIDNKGVIKLADFGLAR 149 (285)
T ss_pred -CeEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHh-CCeeecCCCHHHEEEcCCCcEEECccccee
Confidence 3899999999 6788887664432333445566779999999999995 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-----------
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----------- 246 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----------- 246 (778)
........ .....+...|+|||++.+. ..++.++|+|||||++|+|++|+++|.....
T Consensus 150 ~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~ 218 (285)
T cd07861 150 AFGIPVRV------YTHEVVTLWYRAPEVLLGS-----PRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRIL 218 (285)
T ss_pred ecCCCccc------ccCCcccccccChHHhcCC-----CCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHh
Confidence 65432110 0111334589999987653 2456789999999999999999988753210
Q ss_pred ------------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 ------------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ------------------------------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....++..+.+++++||..||.+||++.++++|+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~ 283 (285)
T cd07861 219 GTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHP 283 (285)
T ss_pred CCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCC
Confidence 00123567778899999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-33 Score=296.49 Aligned_cols=242 Identities=19% Similarity=0.282 Sum_probs=185.3
Q ss_pred CceeccCCCCCC-CceEEEEeEECC-CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC---CCCCeeeEeeeeEecccc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKD-DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV---RHPNILAFLHSTEVENID 94 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~-~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L---rHPnIlk~~d~~e~e~~~ 94 (778)
+|++.+.||.|+ | +||+|++.. ++..|+||.+......+.....+.+|+..++.+ +||||+++++++.....+
T Consensus 2 ~Y~~~~~lg~G~~g--~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 2 QYECVAEIGEGAYG--KVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred CcceeeEeccCCCe--EEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence 699999999998 8 999999854 468899999986544333333455666666655 699999999988632211
Q ss_pred cCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 95 ATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 95 g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
....+|+||||+ ++|.+++....... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+||
T Consensus 80 ---~~~~~~lv~e~~~~~l~~~~~~~~~~~-~~~~~~~~i~~qi~~aL~~lH~-~~iiH~dlkp~Nil~~~~~~~kl~Df 154 (290)
T cd07862 80 ---RETKLTLVFEHVDQDLTTYLDKVPEPG-VPTETIKDMMFQLLRGLDFLHS-HRVVHRDLKPQNILVTSSGQIKLADF 154 (290)
T ss_pred ---CCCcEEEEEccCCCCHHHHHHhCCCCC-CCHHHHHHHHHHHHHHHHHHHH-CCeeeCCCCHHHEEEcCCCCEEEccc
Confidence 134799999999 67888887643222 2344567779999999999995 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hhc-
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRN- 248 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~~- 248 (778)
|++....... ......++..|+|||++.+ ..++.++|+|||||++|||++|.++|.... +..
T Consensus 155 g~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i 221 (290)
T cd07862 155 GLARIYSFQM-------ALTSVVVTLWYRAPEVLLQ------SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKI 221 (290)
T ss_pred cceEeccCCc-------ccccccccccccChHHHhC------CCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHH
Confidence 9987664321 1112234568999999865 356778999999999999999999885321 000
Q ss_pred ----------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ----------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ----------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++.+||+.+|++||++.++++|+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp 288 (290)
T cd07862 222 LDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHP 288 (290)
T ss_pred HHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCC
Confidence 023455678899999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=288.05 Aligned_cols=238 Identities=16% Similarity=0.221 Sum_probs=196.7
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
++...|++-+.||.|. + .||++.++.+|+.+++|+++.+.......+.+.+|+++.+.|+||||+++++++..+.
T Consensus 8 ~f~d~y~l~e~igkG~FS--vVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~-- 83 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFS--VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEES-- 83 (355)
T ss_pred ccchhhhHHHHHccCchH--HHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccc--
Confidence 4567899999999998 7 8999999999999999999976655556788999999999999999999999998753
Q ss_pred cCCcccEEEEEecCCc--ChHH-HHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC---CcE
Q 004025 95 ATSTKITIYIVTEPVM--PLSE-KIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT---LDW 168 (778)
Q Consensus 95 g~~~~~~lyIVtE~v~--~L~~-~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~---g~~ 168 (778)
+.|||+|++. +|.. .+++.- ..+......+.||++||.|+|. .+|||||+||+|+++-.. .-+
T Consensus 84 ------~~ylvFe~m~G~dl~~eIV~R~~----ySEa~aSH~~rQiLeal~yCH~-n~IvHRDvkP~nllLASK~~~A~v 152 (355)
T KOG0033|consen 84 ------FHYLVFDLVTGGELFEDIVAREF----YSEADASHCIQQILEALAYCHS-NGIVHRDLKPENLLLASKAKGAAV 152 (355)
T ss_pred ------eeEEEEecccchHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHh-cCceeccCChhheeeeeccCCCce
Confidence 8999999993 5654 444321 1122245669999999999995 999999999999999633 359
Q ss_pred EEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh--
Q 004025 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-- 246 (778)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l-- 246 (778)
||+|||++..+.+. .....+.++++||+||+++. ..++..+|||+.|+++|-++.|.+||..+..
T Consensus 153 KL~~FGvAi~l~~g-------~~~~G~~GtP~fmaPEvvrk------dpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~r 219 (355)
T KOG0033|consen 153 KLADFGLAIEVNDG-------EAWHGFAGTPGYLSPEVLKK------DPYSKPVDIWACGVILYILLVGYPPFWDEDQHR 219 (355)
T ss_pred eecccceEEEeCCc-------cccccccCCCcccCHHHhhc------CCCCCcchhhhhhHHHHHHHhCCCCCCCccHHH
Confidence 99999999988731 12334567789999999987 4788899999999999999999999865321
Q ss_pred --------------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 --------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 --------------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....|.++..+++++||..||.+|+++.+.|+|+
T Consensus 220 lye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~Hp 268 (355)
T KOG0033|consen 220 LYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHP 268 (355)
T ss_pred HHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCc
Confidence 12246777899999999999999999999999999
|
|
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-33 Score=306.59 Aligned_cols=248 Identities=19% Similarity=0.260 Sum_probs=194.0
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
..+|++.+.||.|+ | +||.|+++.+|..|+||++............+.+|+.+++.++||||+++++++......
T Consensus 20 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-- 95 (359)
T cd07876 20 LKRYQQLKPIGSGAQG--IVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSL-- 95 (359)
T ss_pred hhceEEEEEeecCCCE--EEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCc--
Confidence 35799999999998 8 899999999999999999976544444556788999999999999999999998753210
Q ss_pred CcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 97 ~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
.....+|+||||+ +.|...+... .....+.+++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 96 ~~~~~~~lv~e~~~~~l~~~~~~~-----~~~~~~~~~~~qi~~~L~~LH~-~~ivHrDlkp~NIl~~~~~~~kl~Dfg~ 169 (359)
T cd07876 96 EEFQDVYLVMELMDANLCQVIHME-----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGL 169 (359)
T ss_pred cccceeEEEEeCCCcCHHHHHhcc-----CCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEECCCCCEEEecCCC
Confidence 0123689999999 5677666432 2234466779999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh---------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------- 246 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l--------- 246 (778)
+....... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||.....
T Consensus 170 a~~~~~~~-------~~~~~~~t~~y~aPE~~~~------~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~ 236 (359)
T cd07876 170 ARTACTNF-------MMTPYVVTRYYRAPEVILG------MGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIE 236 (359)
T ss_pred ccccccCc-------cCCCCcccCCCCCchhccC------CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 87653321 1112244568999999876 3567789999999999999999988853210
Q ss_pred -----------------h----cc------------------------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 -----------------R----NT------------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 -----------------~----~~------------------------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. .. ...+..+.+++.+||..||.+||++.++++|+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 316 (359)
T cd07876 237 QLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHP 316 (359)
T ss_pred hcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCc
Confidence 0 00 01234578899999999999999999999999
Q ss_pred cCCcccccccc
Q 004025 282 VGDFWMTEYFQ 292 (778)
Q Consensus 282 ~~~~w~~~ff~ 292 (778)
|+..+|.
T Consensus 317 ----~~~~~~~ 323 (359)
T cd07876 317 ----YITVWYD 323 (359)
T ss_pred ----hhhhhcC
Confidence 7766654
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-33 Score=295.66 Aligned_cols=242 Identities=19% Similarity=0.262 Sum_probs=187.3
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC---CCCCeeeEeeeeEeccccc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV---RHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L---rHPnIlk~~d~~e~e~~~g 95 (778)
+|++.+.||.|+ | +||+|+++.+|+.|+||.+......+.....+.+|+..++.| +||||+++++++.....+.
T Consensus 1 ~y~~~~~lg~g~~g--~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~ 78 (288)
T cd07863 1 QYEPVAEIGVGAYG--TVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDR 78 (288)
T ss_pred CceEeeEEeecCCe--EEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCC
Confidence 599999999998 8 999999999999999999986533332233455666666655 6999999999987532211
Q ss_pred CCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
...+|+|+||+ ++|..++....... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 79 ---~~~~~lv~e~~~~~l~~~~~~~~~~~-~~~~~~~~~~~qi~~al~~lH~-~~ivH~dikp~Nili~~~~~~kl~dfg 153 (288)
T cd07863 79 ---ETKVTLVFEHVDQDLRTYLDKVPPPG-LPAETIKDLMRQFLRGLDFLHA-NCIVHRDLKPENILVTSGGQVKLADFG 153 (288)
T ss_pred ---CceEEEEEcccccCHHHHHHhcCCCC-CCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECCCCCEEECccC
Confidence 34789999999 57888887644222 2345577789999999999995 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----h---
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R--- 247 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~--- 247 (778)
++........ .....++..|+|||++.+ ..++.++|+|||||++|+|++|.++|..... .
T Consensus 154 ~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~------~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~ 220 (288)
T cd07863 154 LARIYSCQMA-------LTPVVVTLWYRAPEVLLQ------STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIF 220 (288)
T ss_pred ccccccCccc-------CCCccccccccCchHhhC------CCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHH
Confidence 9876643211 111234558999999876 3567899999999999999999988743210 0
Q ss_pred --------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 --------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 --------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++.+||..||.+||++.+++.|+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp 286 (288)
T cd07863 221 DLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHP 286 (288)
T ss_pred HHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCC
Confidence 0023455678899999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-34 Score=309.67 Aligned_cols=241 Identities=20% Similarity=0.231 Sum_probs=205.0
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
...|+..+.+|.|. | .++..+++.+++.|++|.+......+.....+.+|+..+++++||||+.|.+.|+.++
T Consensus 3 m~~Ye~~~~iG~GafG--~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~---- 76 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFG--SALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDG---- 76 (426)
T ss_pred cchhhhhhhcCccccc--hhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCC----
Confidence 35799999999999 8 7888899999999999999987766666668999999999999999999999999753
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
.++||||||| ++|.+.|++.+... ..++.|.+++.||+.|+.||| +.+|+|||||+.|||++.++.+||+|||
T Consensus 77 ---~~l~Ivm~Y~eGg~l~~~i~~~k~~~-f~E~~i~~~~~Q~~~av~ylH-~~~iLHRDlK~~Nifltk~~~VkLgDfG 151 (426)
T KOG0589|consen 77 ---QLLCIVMEYCEGGDLAQLIKEQKGVL-FPEERILKWFVQILLAVNYLH-ENRVLHRDLKCANIFLTKDKKVKLGDFG 151 (426)
T ss_pred ---ceEEEEEeecCCCCHHHHHHHHhhcc-ccHHHHHHHHHHHHHHHHHHH-hhhhhcccchhhhhhccccCceeecchh
Confidence 3599999999 68999998876222 234556777999999999999 5999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhcc-----
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT----- 249 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~~----- 249 (778)
+++.+..... .....++++.|++||++.+ ..|..++|||||||.||||++-++.|+..+...+
T Consensus 152 laK~l~~~~~------~a~tvvGTp~YmcPEil~d------~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~ 219 (426)
T KOG0589|consen 152 LAKILNPEDS------LASTVVGTPYYMCPEILSD------IPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKIN 219 (426)
T ss_pred hhhhcCCchh------hhheecCCCcccCHHHhCC------CCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHh
Confidence 9999876421 2233466779999999998 5889999999999999999999999987654332
Q ss_pred ----CCCC----cchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 250 ----ASIP----KSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 250 ----~~iP----~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
..+| ..+..+++.||..+|..||++.++|.+|
T Consensus 220 ~~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P 259 (426)
T KOG0589|consen 220 RGLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRRP 259 (426)
T ss_pred hccCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhCh
Confidence 2333 4578889999999999999999999987
|
|
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=301.58 Aligned_cols=238 Identities=16% Similarity=0.163 Sum_probs=193.6
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
+...+|++.+.||.|+ | .||+++++.+|..|++|++.... .......+.+|+++|+.++||||+++++++..+
T Consensus 2 l~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--- 75 (331)
T cd06649 2 LKDDDFERISELGAGNGG--VVTKVQHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD--- 75 (331)
T ss_pred CCcccceEEEeecCCCCE--EEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC---
Confidence 3567899999999998 7 89999999999999999998643 234456789999999999999999999999864
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+|+||||+ ++|.+++..... .....+..++.||+.||.|||+..+++||||||+||+++.+|.+||+|
T Consensus 76 -----~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~D 147 (331)
T cd06649 76 -----GEISICMEHMDGGSLDQVLKEAKR---IPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCD 147 (331)
T ss_pred -----CEEEEEeecCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEcc
Confidence 3899999999 579999876542 234456667999999999999755799999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN---- 248 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~---- 248 (778)
||++....... .....++..|+|||++.+ ..++.++|+|||||++|||++|+.||.......
T Consensus 148 fg~~~~~~~~~--------~~~~~g~~~y~aPE~~~~------~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~ 213 (331)
T cd06649 148 FGVSGQLIDSM--------ANSFVGTRSYMSPERLQG------THYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAI 213 (331)
T ss_pred Ccccccccccc--------cccCCCCcCcCCHhHhcC------CCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 99987664321 111234568999999876 356789999999999999999998874211000
Q ss_pred --------------------------------------------------------cCCCCcchHHHHHHHhccCCCCCC
Q 004025 249 --------------------------------------------------------TASIPKSLLPDYQRLLSSMPSRRL 272 (778)
Q Consensus 249 --------------------------------------------------------~~~iP~~L~~~i~~lL~~dP~~Rp 272 (778)
...++..+.+++.+||..||.+||
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rp 293 (331)
T cd06649 214 FGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERA 293 (331)
T ss_pred hcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCC
Confidence 012455678999999999999999
Q ss_pred ChHHHHhcc
Q 004025 273 NSSKLIENS 281 (778)
Q Consensus 273 s~~~lL~~~ 281 (778)
++.++++|+
T Consensus 294 t~~ell~h~ 302 (331)
T cd06649 294 DLKMLMNHT 302 (331)
T ss_pred CHHHHhcCh
Confidence 999999998
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=306.49 Aligned_cols=233 Identities=15% Similarity=0.239 Sum_probs=191.8
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.||.|+ | .||+|+++.+++.|+||++.+..... .....+.+|+.+|+.++||||+++++.++..
T Consensus 2 ~y~~~~~ig~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~------ 73 (333)
T cd05600 2 DFQILTQVGQGGYG--QVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDD------ 73 (333)
T ss_pred CcEEEEEEeecCCe--EEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcC------
Confidence 599999999998 8 99999999999999999998643221 3455688999999999999999999999864
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
.++||||||+ ++|.+++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~e~~~g~~L~~~l~~~~~l---~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nil~~~~~~~kL~Dfg~ 147 (333)
T cd05600 74 --EYLYLAMEYVPGGDFRTLLNNLGVL---SEDHARFYMAEMFEAVDALHE-LGYIHRDLKPENFLIDASGHIKLTDFGL 147 (333)
T ss_pred --CEEEEEEeCCCCCCHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEECCCCCEEEEeCcC
Confidence 4899999999 5799999765432 234456679999999999995 9999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc-------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------- 248 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~------- 248 (778)
+...... .....++..|+|||++.+ ..++.++|+|||||++|||++|..||.......
T Consensus 148 a~~~~~~---------~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~ 212 (333)
T cd05600 148 SKGIVTY---------ANSVVGSPDYMAPEVLRG------KGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKY 212 (333)
T ss_pred Ccccccc---------cCCcccCccccChhHhcC------CCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHh
Confidence 8765431 112245568999999876 356789999999999999999999985432110
Q ss_pred ---c----------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ---T----------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ---~----------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ..++..+.+++.+||..+|.+|+++.++++|+
T Consensus 213 ~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~ 258 (333)
T cd05600 213 WKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHP 258 (333)
T ss_pred ccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCc
Confidence 0 13467788999999999999999999999998
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=298.03 Aligned_cols=239 Identities=17% Similarity=0.252 Sum_probs=189.6
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
...|.+.+++|.|+ | +||+|+++.+++.|+||.+....... ....+.+|+.+++.++||||+++++++..+
T Consensus 5 ~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 76 (309)
T cd07872 5 METYIKLEKLGEGTYA--TVFKGRSKLTENLVALKEIRLEHEEG-APCTAIREVSLLKDLKHANIVTLHDIVHTD----- 76 (309)
T ss_pred CCceEEEEEecccCCE--EEEEEEecCCCCeEEEEEeeccccCC-cchhHHHHHHHHHhCCCCCcceEEEEEeeC-----
Confidence 35699999999998 8 89999999999999999997643322 234567899999999999999999999864
Q ss_pred CcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 97 ~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+|+||||+ ++|..++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 77 ---~~~~lv~e~~~~~l~~~~~~~~~--~~~~~~~~~~~~qi~~aL~~lH~-~~ivH~dlkp~Nill~~~~~~kl~Dfg~ 150 (309)
T cd07872 77 ---KSLTLVFEYLDKDLKQYMDDCGN--IMSMHNVKIFLYQILRGLAYCHR-RKVLHRDLKPQNLLINERGELKLADFGL 150 (309)
T ss_pred ---CeEEEEEeCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECCCCCEEECcccc
Confidence 3899999999 578887765432 12234455668999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh--------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~-------- 247 (778)
+......... .....++..|+|||++.+. ..++.++|+|||||++|+|++|.+||......
T Consensus 151 ~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 219 (309)
T cd07872 151 ARAKSVPTKT------YSNEVVTLWYRPPDVLLGS-----SEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFR 219 (309)
T ss_pred ceecCCCccc------cccccccccccCCHHHhCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence 8765432110 1112345689999998653 34677899999999999999999887432110
Q ss_pred ----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ----------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++++||+.||.+|+++.++++|+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~ 287 (309)
T cd07872 220 LLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHA 287 (309)
T ss_pred HhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcCh
Confidence 0123566778899999999999999999999998
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-33 Score=293.07 Aligned_cols=245 Identities=15% Similarity=0.178 Sum_probs=197.7
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
..|++.+.||.|. | +||.+..+.++..+|+|++++.... ...+.++..|-++|..+.||.+..+|..|+++
T Consensus 77 ~~f~llk~LG~GdiG--~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~----- 149 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIG--TVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETD----- 149 (459)
T ss_pred HHHHHHHHcCCCCce--eEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeecc-----
Confidence 3588899999999 9 9999999999999999999986533 34567788899999999999999999999985
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
.++|+||||| ++|..+.+++.. ....+..++.++..|+-||.|||. .|||+|||||+||+|-++|++.|.||+
T Consensus 150 ---~~~cl~meyCpGGdL~~LrqkQp~-~~fse~~aRFYaAEvl~ALEYLHm-lGivYRDLKPENILvredGHIMLsDFD 224 (459)
T KOG0610|consen 150 ---KYSCLVMEYCPGGDLHSLRQKQPG-KRFSESAARFYAAEVLLALEYLHM-LGIVYRDLKPENILVREDGHIMLSDFD 224 (459)
T ss_pred ---ceeEEEEecCCCccHHHHHhhCCC-CccchhhHHHHHHHHHHHHHHHHh-hceeeccCCcceeEEecCCcEEeeecc
Confidence 4999999999 689888776553 233455577889999999999996 999999999999999999999999999
Q ss_pred cccccCCCCCC-----------------------------C-C------------------C--CccccccccCCCCCCc
Q 004025 175 VLSEFDGNNEA-----------------------------A-N------------------G--PMLQYAWLVGAQYKPV 204 (778)
Q Consensus 175 la~~~~~~~~~-----------------------------~-~------------------~--~~~~~~~~~~~~Y~aP 204 (778)
++....-.... . . . ......++++..|.||
T Consensus 225 LS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAP 304 (459)
T KOG0610|consen 225 LSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAP 304 (459)
T ss_pred ccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccc
Confidence 97543210000 0 0 0 0111223445589999
Q ss_pred cccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hhcc----C------CCCcchHHHHHHHhccCCCC
Q 004025 205 ELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRNT----A------SIPKSLLPDYQRLLSSMPSR 270 (778)
Q Consensus 205 E~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~~~----~------~iP~~L~~~i~~lL~~dP~~ 270 (778)
|++++ .+.+.++|+|.||+++|||+.|..||+... +.++ . .++..+.++|++||.+||.+
T Consensus 305 EvI~G------~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~k 378 (459)
T KOG0610|consen 305 EVIRG------EGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSK 378 (459)
T ss_pred eeeec------CCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhh
Confidence 99998 478899999999999999999999997643 2222 2 33456899999999999999
Q ss_pred CCC----hHHHHhcc
Q 004025 271 RLN----SSKLIENS 281 (778)
Q Consensus 271 Rps----~~~lL~~~ 281 (778)
|+. ++++.+|+
T Consensus 379 Rlg~~rGA~eIK~Hp 393 (459)
T KOG0610|consen 379 RLGSKRGAAEIKRHP 393 (459)
T ss_pred hhccccchHHhhcCc
Confidence 999 89999997
|
|
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-33 Score=306.45 Aligned_cols=241 Identities=16% Similarity=0.234 Sum_probs=193.3
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.||.|+ | +||+|+++.+|+.|+||++.+..... .....+.+|+++++.++||||+++++.++++
T Consensus 2 ~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------ 73 (350)
T cd05573 2 DFEVIKVIGRGAFG--EVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDE------ 73 (350)
T ss_pred CceEEEEEEeCCcE--EEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecC------
Confidence 699999999998 8 99999999999999999998643222 3456788999999999999999999999864
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
.++|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~i~~qi~~aL~~LH~-~giiH~Dlkp~NIll~~~~~~kL~Dfg~ 147 (350)
T cd05573 74 --EHLYLVMEYMPGGDLMNLLIRKDV---FPEETARFYIAELVLALDSVHK-LGFIHRDIKPDNILIDADGHIKLADFGL 147 (350)
T ss_pred --CeEEEEEcCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHeEECCCCCEEeecCCC
Confidence 4899999999 579998877532 2344566779999999999996 9999999999999999999999999999
Q ss_pred ccccCCCCCCC-----------------------CCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHH
Q 004025 176 LSEFDGNNEAA-----------------------NGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIY 232 (778)
Q Consensus 176 a~~~~~~~~~~-----------------------~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liy 232 (778)
+.......... ..........++..|+|||++.+ ..++.++|+|||||++|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlG~il~ 221 (350)
T cd05573 148 CKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRG------TPYGLECDWWSLGVILY 221 (350)
T ss_pred CccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcC------CCCCCceeeEecchhhh
Confidence 98765432000 00011112244568999999887 36778999999999999
Q ss_pred HHHhCCCCCChhhh-------hc---------cCCCCcchHHHHHHHhccCCCCCCC-hHHHHhcc
Q 004025 233 ELFSGMRLSKTEEL-------RN---------TASIPKSLLPDYQRLLSSMPSRRLN-SSKLIENS 281 (778)
Q Consensus 233 el~tg~~p~~~~~l-------~~---------~~~iP~~L~~~i~~lL~~dP~~Rps-~~~lL~~~ 281 (778)
||++|..||..... .. ...+|..+.+++++||. +|..|++ +.++++|+
T Consensus 222 ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp 286 (350)
T cd05573 222 EMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHP 286 (350)
T ss_pred hhccCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCC
Confidence 99999998854211 11 12357778999999997 9999999 99999998
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=303.51 Aligned_cols=247 Identities=17% Similarity=0.235 Sum_probs=193.6
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.||.|+ | .||.+.++.+++.|+||++............+.+|+.+++.++||||+++++++...... .
T Consensus 17 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--~ 92 (355)
T cd07874 17 KRYQNLKPIGSGAQG--IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSL--E 92 (355)
T ss_pred hceeEEEEeeecCCE--EEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccc--c
Confidence 5799999999998 8 899999999999999999986544445566788999999999999999999998653210 0
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
....+|+||||+ +.|...+... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 93 ~~~~~~lv~e~~~~~l~~~~~~~-----l~~~~~~~~~~qi~~aL~~LH~-~givHrDikp~Nill~~~~~~kl~Dfg~~ 166 (355)
T cd07874 93 EFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLA 166 (355)
T ss_pred ccceeEEEhhhhcccHHHHHhhc-----CCHHHHHHHHHHHHHHHHHHHh-CCcccCCCChHHEEECCCCCEEEeeCccc
Confidence 124689999999 5677766532 2234456679999999999995 99999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh--------c
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------N 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~--------~ 248 (778)
+...... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||...... .
T Consensus 167 ~~~~~~~-------~~~~~~~t~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~ 233 (355)
T cd07874 167 RTAGTSF-------MMTPYVVTRYYRAPEVILG------MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 233 (355)
T ss_pred ccCCCcc-------ccCCccccCCccCHHHHcC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 8654321 1122345668999999876 35678999999999999999999887532100 0
Q ss_pred ----------------------c------------------------CCCCcchHHHHHHHhccCCCCCCChHHHHhccc
Q 004025 249 ----------------------T------------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSV 282 (778)
Q Consensus 249 ----------------------~------------------------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~ 282 (778)
. ...+..+.+++.+||..||.+|||+.++++|+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp- 312 (355)
T cd07874 234 LGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHP- 312 (355)
T ss_pred hCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCc-
Confidence 0 00123467889999999999999999999999
Q ss_pred CCcccccccc
Q 004025 283 GDFWMTEYFQ 292 (778)
Q Consensus 283 ~~~w~~~ff~ 292 (778)
|+..++.
T Consensus 313 ---~~~~~~~ 319 (355)
T cd07874 313 ---YINVWYD 319 (355)
T ss_pred ---chhcccC
Confidence 7766554
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=306.56 Aligned_cols=243 Identities=18% Similarity=0.229 Sum_probs=190.7
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.||.|+ | +||+|+++.+|+.|+||++............+.+|+++|+.++||||++++++++......
T Consensus 1 ~~~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~--- 75 (372)
T cd07853 1 DVEPDRPIGYGAFG--VVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDP--- 75 (372)
T ss_pred CCcccceeeeCCCE--EEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccc---
Confidence 488999999998 8 9999999999999999998754333344567889999999999999999999998643211
Q ss_pred ccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 99 ~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
...+|+||||+ ++|...+..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++.
T Consensus 76 ~~~~~lv~e~~~~~l~~~~~~~~~---l~~~~~~~~~~qi~~aL~~LH~-~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~ 151 (372)
T cd07853 76 FEEIYVVTELMQSDLHKIIVSPQP---LSSDHVKVFLYQILRGLKYLHS-AGILHRDIKPGNLLVNSNCVLKICDFGLAR 151 (372)
T ss_pred cceEEEEeeccccCHHHHHhcCCC---CCHHHHHHHHHHHHHHHHHHHh-CCeeCCCCChHHEEECCCCCEEecccccee
Confidence 23789999999 567777754332 2345567779999999999995 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----h------
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R------ 247 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~------ 247 (778)
........ ......++..|+|||++.+. ..++.++|+|||||++|||++|+.||..... .
T Consensus 152 ~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~ 221 (372)
T cd07853 152 VEEPDESK-----HMTQEVVTQYYRAPEILMGS-----RHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLL 221 (372)
T ss_pred ecccCccc-----cCCCCCcCCCcCCHHHHcCC-----CCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHc
Confidence 65432110 01112345689999998763 3467789999999999999999988853210 0
Q ss_pred ----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ----------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....+..+.+++.+||..||.+||++.++++|+
T Consensus 222 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 289 (372)
T cd07853 222 GTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHP 289 (372)
T ss_pred CCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCH
Confidence 0012345677899999999999999999999998
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=309.09 Aligned_cols=234 Identities=15% Similarity=0.174 Sum_probs=186.5
Q ss_pred CCCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 15 GVKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 15 ~~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
++....|++.+.||.|+ | .||.|.++.+++.|+||.... ..+.+|+++|+.|+||||+++++++..+
T Consensus 88 ~~~~~~y~~~~~lg~G~~g--~V~~~~d~~~~~~vaiK~~~~--------~~~~~E~~il~~l~HpnIv~~~~~~~~~-- 155 (391)
T PHA03212 88 GIEKAGFSILETFTPGAEG--FAFACIDNKTCEHVVIKAGQR--------GGTATEAHILRAINHPSIIQLKGTFTYN-- 155 (391)
T ss_pred ccccCCcEEEEEEcCCCCe--EEEEEEECCCCCEEEEechhh--------hhhHHHHHHHHhCCCCCCCCEeEEEEEC--
Confidence 34456799999999998 8 999999999999999997532 2467899999999999999999999864
Q ss_pred ccCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 94 DATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
...|+|+|++ ++|..++...... ....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|
T Consensus 156 ------~~~~lv~e~~~~~L~~~l~~~~~l---~~~~~~~i~~qi~~aL~ylH~-~~IvHrDiKP~NIll~~~~~vkL~D 225 (391)
T PHA03212 156 ------KFTCLILPRYKTDLYCYLAAKRNI---AICDILAIERSVLRAIQYLHE-NRIIHRDIKAENIFINHPGDVCLGD 225 (391)
T ss_pred ------CeeEEEEecCCCCHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHh-CCcccCCCChHhEEEcCCCCEEEEe
Confidence 3899999999 5788887664322 233456679999999999996 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCC-Chh-------
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLS-KTE------- 244 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~-~~~------- 244 (778)
||++........ ...+.+.++..|+|||++.+ ..++.++|+|||||++|||++|..++ ...
T Consensus 226 FG~a~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~ 294 (391)
T PHA03212 226 FGAACFPVDINA-----NKYYGWAGTIATNAPELLAR------DPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCD 294 (391)
T ss_pred CCcccccccccc-----cccccccCccCCCChhhhcC------CCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCc
Confidence 999875432110 01123456679999999876 35678999999999999999998543 110
Q ss_pred ---h----------------------hh---------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHH
Q 004025 245 ---E----------------------LR---------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLI 278 (778)
Q Consensus 245 ---~----------------------l~---------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL 278 (778)
+ +. ....+|..+.+++.+||+.||.+||++.++|
T Consensus 295 ~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL 374 (391)
T PHA03212 295 SDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALL 374 (391)
T ss_pred hhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHh
Confidence 0 00 0113466788899999999999999999999
Q ss_pred hcc
Q 004025 279 ENS 281 (778)
Q Consensus 279 ~~~ 281 (778)
+|+
T Consensus 375 ~hp 377 (391)
T PHA03212 375 DFA 377 (391)
T ss_pred cCh
Confidence 998
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=294.00 Aligned_cols=236 Identities=14% Similarity=0.201 Sum_probs=188.6
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
|++.+.||.|+ | +||+|.++.+|+.|+||.+.+..... .....+.+|+++|+.++||||+++++.++++
T Consensus 2 f~~~~~lg~G~~g--~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~------- 72 (285)
T cd05631 2 FRHYRVLGKGGFG--EVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETK------- 72 (285)
T ss_pred ceEEEEEecCCCE--EEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccC-------
Confidence 78889999998 8 99999999999999999998643222 2334577899999999999999999999864
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|+||||+ ++|..++....... .....+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||++
T Consensus 73 -~~~~lv~e~~~~g~L~~~~~~~~~~~-~~~~~~~~~~~qi~~~l~~lH~-~~iiH~dikp~Nill~~~~~~kl~Dfg~~ 149 (285)
T cd05631 73 -DALCLVLTIMNGGDLKFHIYNMGNPG-FDEQRAIFYAAELCCGLEDLQR-ERIVYRDLKPENILLDDRGHIRISDLGLA 149 (285)
T ss_pred -CeEEEEEEecCCCcHHHHHHhhCCCC-CCHHHHHHHHHHHHHHHHHHHh-CCEEeCCCCHHHEEECCCCCEEEeeCCCc
Confidence 3899999999 57887776543211 2233455668999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-------hh--
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-------LR-- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-------l~-- 247 (778)
........ .....++..|+|||++.+ ..++.++|+|||||++|||++|..||.... +.
T Consensus 150 ~~~~~~~~-------~~~~~g~~~y~aPE~~~~------~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~ 216 (285)
T cd05631 150 VQIPEGET-------VRGRVGTVGYMAPEVINN------EKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRR 216 (285)
T ss_pred EEcCCCCe-------ecCCCCCCCccCHhhhcC------CCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHH
Confidence 77543211 112234568999999876 356789999999999999999999985321 11
Q ss_pred -------ccCCCCcchHHHHHHHhccCCCCCCC-----hHHHHhcc
Q 004025 248 -------NTASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENS 281 (778)
Q Consensus 248 -------~~~~iP~~L~~~i~~lL~~dP~~Rps-----~~~lL~~~ 281 (778)
....++..+..++++||+.||.+|++ ++++++|+
T Consensus 217 ~~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~ 262 (285)
T cd05631 217 VKEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHP 262 (285)
T ss_pred hhcccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCH
Confidence 01246677889999999999999997 89999998
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=299.72 Aligned_cols=238 Identities=16% Similarity=0.182 Sum_probs=192.0
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
+...+|++.++||.|+ | .||.++++.++..|++|.+.... .+...+.+.+|+++|+.++||||++++++++.+
T Consensus 2 l~~~~y~~~~~lg~g~~g--~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--- 75 (333)
T cd06650 2 LKDDDFEKISELGAGNGG--VVFKVSHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD--- 75 (333)
T ss_pred cchhhhheeccccCCCCE--EEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCcccceeEEEEEC---
Confidence 3457899999999998 8 89999999999999999987643 333456788999999999999999999999874
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+|+||||+ ++|.+++...+.. ....+..++.||+.||.|||+..+++||||||+||+++.+|.+||+|
T Consensus 76 -----~~~~lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~D 147 (333)
T cd06650 76 -----GEISICMEHMDGGSLDQVLKKAGRI---PEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCD 147 (333)
T ss_pred -----CEEEEEEecCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEee
Confidence 3899999999 5799998765432 23445667899999999999646899999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN---- 248 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~---- 248 (778)
||++..+.... .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||.......
T Consensus 148 fg~~~~~~~~~--------~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~ 213 (333)
T cd06650 148 FGVSGQLIDSM--------ANSFVGTRSYMSPERLQG------THYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELM 213 (333)
T ss_pred CCcchhhhhhc--------cccCCCCccccCHHHhcC------CCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHH
Confidence 99987654321 011234558999999876 356778999999999999999988764211000
Q ss_pred ------------------------------------------------------cCCCCcchHHHHHHHhccCCCCCCCh
Q 004025 249 ------------------------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNS 274 (778)
Q Consensus 249 ------------------------------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~ 274 (778)
...++..+.+++.+||..||.+||++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~ 293 (333)
T cd06650 214 FGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADL 293 (333)
T ss_pred hcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCH
Confidence 00134567789999999999999999
Q ss_pred HHHHhcc
Q 004025 275 SKLIENS 281 (778)
Q Consensus 275 ~~lL~~~ 281 (778)
.++++|+
T Consensus 294 ~ell~h~ 300 (333)
T cd06650 294 KQLMVHA 300 (333)
T ss_pred HHHhhCH
Confidence 9999998
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-33 Score=306.19 Aligned_cols=241 Identities=15% Similarity=0.197 Sum_probs=190.7
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.||.|+ | +||.|+++.+|+.|+||++.+... .......+++|+.+|+.++||||+++++.+++.
T Consensus 2 ~y~~~~~lG~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~------ 73 (364)
T cd05599 2 DFESIKVIGRGAFG--EVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDE------ 73 (364)
T ss_pred CceEEEEEEecCCE--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcC------
Confidence 699999999998 8 999999999999999999985422 123456688999999999999999999999874
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
.++||||||| ++|.+++...+. .....+.+++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~E~~~~g~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~lH~-~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 147 (364)
T cd05599 74 --NYLYLIMEYLPGGDMMTLLMKKDT---FTEEETRFYIAETILAIDSIHK-LGYIHRDIKPDNLLLDAKGHIKLSDFGL 147 (364)
T ss_pred --CeEEEEECCCCCcHHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeEeccCCHHHeEECCCCCEEEeeccc
Confidence 4899999999 579998876542 2344567779999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCC-----------------C---------------ccccccccCCCCCCccccccccccccCCCCCcch
Q 004025 176 LSEFDGNNEAANG-----------------P---------------MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSID 223 (778)
Q Consensus 176 a~~~~~~~~~~~~-----------------~---------------~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~D 223 (778)
+..+......... + ...+...++..|+|||++.+ ..++.++|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~D 221 (364)
T cd05599 148 CTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQ------TGYNKECD 221 (364)
T ss_pred ceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcC------CCCCCeee
Confidence 8765432110000 0 00112235668999999875 35678999
Q ss_pred hHHHHHHHHHHHhCCCCCChhhhh----------cc------CCCCcchHHHHHHHhccCCCCCCC---hHHHHhcc
Q 004025 224 SWGLGCLIYELFSGMRLSKTEELR----------NT------ASIPKSLLPDYQRLLSSMPSRRLN---SSKLIENS 281 (778)
Q Consensus 224 iwSLG~liyel~tg~~p~~~~~l~----------~~------~~iP~~L~~~i~~lL~~dP~~Rps---~~~lL~~~ 281 (778)
+|||||++|||++|..||...... .. ..+++.+.+++++||. +|.+|++ +.++++|+
T Consensus 222 iwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~ 297 (364)
T cd05599 222 WWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHP 297 (364)
T ss_pred eecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCC
Confidence 999999999999999998643211 00 1345667888999986 8999998 99999998
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-32 Score=312.40 Aligned_cols=239 Identities=18% Similarity=0.183 Sum_probs=190.8
Q ss_pred CceeccCCCCCC-CceEEEEeEECCC-CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDD-GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~-g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.|.+.+.+|.|+ | .||.|.+..+ +..|++|.+... .......+++|+.+|+.++||||+++++.++.+
T Consensus 68 ~y~~~~~lg~G~~g--~vy~a~~~~~~~~~vv~K~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~------ 137 (478)
T PTZ00267 68 MYVLTTLVGRNPTT--AAFVATRGSDPKEKVVAKFVMLN--DERQAAYARSELHCLAACDHFGIVKHFDDFKSD------ 137 (478)
T ss_pred eEEEEEEEEeCCCc--EEEEEEEcCCCCeEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEEC------
Confidence 499999999998 7 8999999888 788999987543 233456788999999999999999999999874
Q ss_pred cccEEEEEecCC--cChHHHHHHhCc-CCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
.++||||||+ ++|.++|..... ........+.+++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|||
T Consensus 138 --~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~-~~ivHrDlkp~NIll~~~~~~kL~DFg 214 (478)
T PTZ00267 138 --DKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHS-RKMMHRDLKSANIFLMPTGIIKLGDFG 214 (478)
T ss_pred --CEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh-CCEEECCcCHHhEEECCCCcEEEEeCc
Confidence 3899999999 579988865321 1122344566779999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh-------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------- 247 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------- 247 (778)
++..+...... .......++..|+|||++.+ ..++.++|+|||||++|||++|..||......
T Consensus 215 la~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~------~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~ 284 (478)
T PTZ00267 215 FSKQYSDSVSL----DVASSFCGTPYYLAPELWER------KRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVL 284 (478)
T ss_pred CceecCCcccc----ccccccCCCccccCHhHhCC------CCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 99876542110 01112245568999999876 35678999999999999999999888643211
Q ss_pred --cc----CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 --NT----ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 --~~----~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. ..++..+.+++.+||..+|..||++.+++.++
T Consensus 285 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~ 324 (478)
T PTZ00267 285 YGKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTE 324 (478)
T ss_pred hCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCH
Confidence 11 24566788999999999999999999999987
|
|
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=312.96 Aligned_cols=244 Identities=16% Similarity=0.258 Sum_probs=187.5
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|++++.||.|+ | +||+|+++.+++.||||++.... ....+|+.+|+.++||||+++++++..+....
T Consensus 64 ~~~~y~~~~~LG~G~fg--~Vy~~~~~~~~~~vAiK~i~~~~------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~ 135 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFG--VVYEAICIDTSEKVAIKKVLQDP------QYKNRELLIMKNLNHINIIFLKDYYYTECFKK 135 (440)
T ss_pred cCCeEEEeEEEEeCCCE--EEEEEEECCCCCEEEEEEEecCc------chHHHHHHHHHhcCCCCCcceeeeEeeccccc
Confidence 445799999999998 8 99999999999999999986431 13457999999999999999998875432111
Q ss_pred CCcccEEEEEecCC-cChHHHHHHhCcC-CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC-cEEEEe
Q 004025 96 TSTKITIYIVTEPV-MPLSEKIKELGLE-GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-DWKLHA 172 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~~L~~~L~~~~~~-~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g-~~KL~d 172 (778)
.....++|+||||+ +.|..++...... .......+..+++||+.||.|||+ .+|+||||||+||+++.++ .+||+|
T Consensus 136 ~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~-~~IiHrDLKp~NILl~~~~~~vkL~D 214 (440)
T PTZ00036 136 NEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHS-KFICHRDLKPQNLLIDPNTHTLKLCD 214 (440)
T ss_pred CCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCEecCCcCHHHEEEcCCCCceeeec
Confidence 11134688999999 5787777653221 223344566778999999999995 8999999999999999665 699999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hhc
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRN 248 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~~ 248 (778)
||+++.+..... .....++..|+|||++.+. ..++.++|+|||||++|||++|.+||.... +..
T Consensus 215 FGla~~~~~~~~-------~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~ 282 (440)
T PTZ00036 215 FGSAKNLLAGQR-------SVSYICSRFYRAPELMLGA-----TNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVR 282 (440)
T ss_pred cccchhccCCCC-------cccCCCCcCccCHHHhcCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence 999987654211 1123456689999998653 356789999999999999999999885421 000
Q ss_pred c-------------------------------------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 T-------------------------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ~-------------------------------------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+ ...|..+.+++.+||..+|.+|+++.++++|+
T Consensus 283 i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp 352 (440)
T PTZ00036 283 IIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADP 352 (440)
T ss_pred HHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCCh
Confidence 0 12456788999999999999999999999998
|
|
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=298.42 Aligned_cols=229 Identities=16% Similarity=0.195 Sum_probs=183.0
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEEE
Q 004025 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104 (778)
Q Consensus 27 lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~lyI 104 (778)
||.|+ | +||+|+++.+++.|+||++.+... .......+.+|+.+|+.++||||+++++.++.+ ..+||
T Consensus 1 lg~G~~g--~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--------~~~~l 70 (312)
T cd05585 1 IGKGSFG--KVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSP--------EKLYL 70 (312)
T ss_pred CCcCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecC--------CeEEE
Confidence 46676 7 899999999999999999975321 223456678899999999999999999999864 48999
Q ss_pred EecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCCC
Q 004025 105 VTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGN 182 (778)
Q Consensus 105 VtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~ 182 (778)
||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++......
T Consensus 71 v~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~-~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 146 (312)
T cd05585 71 VLAFINGGELFHHLQREGR---FDLSRARFYTAELLCALENLHK-FNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD 146 (312)
T ss_pred EEcCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeEeCCCCHHHeEECCCCcEEEEECcccccCccC
Confidence 99999 579888876542 2334456679999999999995 99999999999999999999999999998754322
Q ss_pred CCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc------------cC
Q 004025 183 NEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------------TA 250 (778)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~------------~~ 250 (778)
... .....++..|+|||++.+ ..++.++|+|||||++|||++|..||....... ..
T Consensus 147 ~~~------~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 214 (312)
T cd05585 147 DDK------TNTFCGTPEYLAPELLLG------HGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPD 214 (312)
T ss_pred CCc------cccccCCcccCCHHHHcC------CCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCCC
Confidence 110 112234568999999876 357789999999999999999999986432211 13
Q ss_pred CCCcchHHHHHHHhccCCCCCCC---hHHHHhcc
Q 004025 251 SIPKSLLPDYQRLLSSMPSRRLN---SSKLIENS 281 (778)
Q Consensus 251 ~iP~~L~~~i~~lL~~dP~~Rps---~~~lL~~~ 281 (778)
.++..+.+++.+||..||.+|++ +.++++|+
T Consensus 215 ~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp 248 (312)
T cd05585 215 GFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHP 248 (312)
T ss_pred cCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCC
Confidence 46677889999999999999974 68999998
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-33 Score=301.25 Aligned_cols=234 Identities=17% Similarity=0.225 Sum_probs=184.2
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHH---hcCCCCCeeeEeeeeEeccccc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRL---RTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~L---k~LrHPnIlk~~d~~e~e~~~g 95 (778)
|++.+.||.|+ | +||.|.++.+|+.|+||++.+... .....+.+.+|++.+ +.++||||++++++++..
T Consensus 1 y~i~~~lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~---- 74 (324)
T cd05589 1 FRCLAVLGRGHFG--KVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTE---- 74 (324)
T ss_pred CeEEEEEeecCCE--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcC----
Confidence 78889999998 7 999999999999999999985421 112345566666554 567899999999999863
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..+|+||||+ ++|..++.... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+||
T Consensus 75 ----~~~~lv~E~~~~~~L~~~~~~~~----l~~~~~~~~~~qi~~al~~lH~-~~ivHrdlkp~Nill~~~~~~kL~Df 145 (324)
T cd05589 75 ----DHVCFVMEYAAGGDLMMHIHTDV----FSEPRAVFYAACVVLGLQYLHE-NKIVYRDLKLDNLLLDTEGFVKIADF 145 (324)
T ss_pred ----CEEEEEEcCCCCCcHHHHhhcCC----CCHHHHHHHHHHHHHHHHHHHh-CCeEecCCCHHHeEECCCCcEEeCcc
Confidence 4899999999 46877775433 2334456669999999999995 99999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------ 247 (778)
|++........ ......+...|+|||++.+ ..++.++|+|||||++|||++|..||......
T Consensus 146 g~~~~~~~~~~------~~~~~~g~~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i 213 (324)
T cd05589 146 GLCKEGMGFGD------RTSTFCGTPEFLAPEVLTE------TSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSI 213 (324)
T ss_pred cCCccCCCCCC------cccccccCccccCHhHhcC------CCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 99875432211 0112244568999999876 35678899999999999999999998643211
Q ss_pred ------ccCCCCcchHHHHHHHhccCCCCCC-----ChHHHHhcc
Q 004025 248 ------NTASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENS 281 (778)
Q Consensus 248 ------~~~~iP~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~ 281 (778)
....+|..+.+++++||+.||.+|| ++.++++|+
T Consensus 214 ~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~ 258 (324)
T cd05589 214 VNDEVRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQP 258 (324)
T ss_pred HhCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCC
Confidence 1134677788999999999999999 688999997
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-33 Score=304.44 Aligned_cols=237 Identities=18% Similarity=0.204 Sum_probs=190.6
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCC-CcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDG-SPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g-~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~ 92 (778)
+...+|++.+.||.|+ | .||+|+++.++ ..|+||++.+... .....+.+.+|+++++.++||||+++++++..+
T Consensus 27 ~~~~~y~~~~~ig~G~~g--~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~- 103 (340)
T PTZ00426 27 MKYEDFNFIRTLGTGSFG--RVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDE- 103 (340)
T ss_pred CChhhcEEEEEEeecCCe--EEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeC-
Confidence 3445799999999998 8 89999876554 7899999975422 223456788999999999999999999999874
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEE
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
..+||||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||
T Consensus 104 -------~~~~lv~Ey~~~g~L~~~i~~~~~---~~~~~~~~~~~qi~~aL~~LH~-~~ivHrDLkp~NILl~~~~~ikL 172 (340)
T PTZ00426 104 -------SYLYLVLEFVIGGEFFTFLRRNKR---FPNDVGCFYAAQIVLIFEYLQS-LNIVYRDLKPENLLLDKDGFIKM 172 (340)
T ss_pred -------CEEEEEEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeEccCCCHHHEEECCCCCEEE
Confidence 3899999999 579998876543 2344456679999999999995 99999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---- 246 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l---- 246 (778)
+|||++...... .....++..|+|||++.+ ..++.++|+|||||++|||++|.+||.....
T Consensus 173 ~DFG~a~~~~~~---------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~ 237 (340)
T PTZ00426 173 TDFGFAKVVDTR---------TYTLCGTPEYIAPEILLN------VGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIY 237 (340)
T ss_pred ecCCCCeecCCC---------cceecCChhhcCHHHHhC------CCCCccccccchhhHHHHHhcCCCCCCCCCHHHHH
Confidence 999998876431 112244568999999876 3567899999999999999999998864321
Q ss_pred h----cc----CCCCcchHHHHHHHhccCCCCCC-----ChHHHHhcc
Q 004025 247 R----NT----ASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENS 281 (778)
Q Consensus 247 ~----~~----~~iP~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~ 281 (778)
. .. ..++..+.+++++||+.+|.+|+ ++.++++|+
T Consensus 238 ~~i~~~~~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp 285 (340)
T PTZ00426 238 QKILEGIIYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHP 285 (340)
T ss_pred HHHhcCCCCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCC
Confidence 1 11 23456678899999999999996 899999998
|
|
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-32 Score=302.20 Aligned_cols=246 Identities=17% Similarity=0.236 Sum_probs=192.1
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|.+.+.||.|+ | .||.|.++.+++.|+||++............+.+|+.+++.++||||+++++++...... .
T Consensus 24 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~--~ 99 (364)
T cd07875 24 KRYQNLKPIGSGAQG--IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL--E 99 (364)
T ss_pred cceeEEEEeecCCCe--EEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccc--c
Confidence 5799999999998 8 899999999999999999986544444556788999999999999999999988643210 0
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
....+|+||||+ +.|..++... .....+.+++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 100 ~~~~~~lv~e~~~~~l~~~~~~~-----~~~~~~~~~~~qi~~aL~~LH~-~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 173 (364)
T cd07875 100 EFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLA 173 (364)
T ss_pred ccCeEEEEEeCCCCCHHHHHHhc-----CCHHHHHHHHHHHHHHHHHHhh-CCeecCCCCHHHEEECCCCcEEEEeCCCc
Confidence 124689999999 5677776532 1234466779999999999995 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh--------hc
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------RN 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l--------~~ 248 (778)
+...... ......++..|+|||++.+ ..++.++|+|||||++|+|++|+.||..... ..
T Consensus 174 ~~~~~~~-------~~~~~~~t~~y~aPE~~~~------~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~ 240 (364)
T cd07875 174 RTAGTSF-------MMTPYVVTRYYRAPEVILG------MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240 (364)
T ss_pred cccCCCC-------cccCCcccCCcCCHHHHhC------CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 7654321 1112345568999999876 3567899999999999999999988753210 00
Q ss_pred ----------------------cC------------------------CCCcchHHHHHHHhccCCCCCCChHHHHhccc
Q 004025 249 ----------------------TA------------------------SIPKSLLPDYQRLLSSMPSRRLNSSKLIENSV 282 (778)
Q Consensus 249 ----------------------~~------------------------~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~ 282 (778)
.. ..+..+.+++.+||..||.+||++.++|+|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp- 319 (364)
T cd07875 241 LGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP- 319 (364)
T ss_pred cCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCc-
Confidence 00 0123467889999999999999999999999
Q ss_pred CCccccccc
Q 004025 283 GDFWMTEYF 291 (778)
Q Consensus 283 ~~~w~~~ff 291 (778)
|+..++
T Consensus 320 ---~~~~~~ 325 (364)
T cd07875 320 ---YINVWY 325 (364)
T ss_pred ---cccccc
Confidence 665444
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-32 Score=293.69 Aligned_cols=241 Identities=18% Similarity=0.256 Sum_probs=181.8
Q ss_pred CCceeccCCCCCC-CceEEEEeEECC--CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKD--DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~--~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
|.|+ +.+||.|+ | +||+|+++. ++..|+||.+..... ...+.+|+++|+.++||||+++++.+....
T Consensus 2 ~~~~-~~~lG~G~~g--~Vy~~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--- 71 (317)
T cd07868 2 FEYE-GCKVGRGTYG--HVYKAKRKDGKDDRDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSHA--- 71 (317)
T ss_pred cccc-ccccccCCCe--EEEEEEEccCCCCceEEEEEECCCCC----cHHHHHHHHHHHhcCCCCCcceeeeEecCC---
Confidence 4555 56899998 8 999999764 678999999875432 234678999999999999999999987544
Q ss_pred CCcccEEEEEecCC-cChHHHHHHhCcC------CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEE----cC
Q 004025 96 TSTKITIYIVTEPV-MPLSEKIKELGLE------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV----TQ 164 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~~L~~~L~~~~~~------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v----~~ 164 (778)
...+|+|+||+ ++|..++...... .......++.++.||+.||.|||+ .+++||||||+||++ +.
T Consensus 72 ---~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~-~~ivHrDlkp~Nil~~~~~~~ 147 (317)
T cd07868 72 ---DRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA-NWVLHRDLKPANILVMGEGPE 147 (317)
T ss_pred ---CcEEEEEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHh-CCEEcCCCCHHHEEEecCCCC
Confidence 34899999999 5788777643211 112344577789999999999995 899999999999999 46
Q ss_pred CCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh
Q 004025 165 TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE 244 (778)
Q Consensus 165 ~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~ 244 (778)
+|.+||+|||++..+........ ......++..|+|||++.+. ..++.++|+|||||++|+|++|.+||...
T Consensus 148 ~~~~kl~DfG~a~~~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 148 RGRVKIADMGFARLFNSPLKPLA---DLDPVVVTFWYRAPELLLGA-----RHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred cCcEEEeecCceeccCCCCcccc---ccCCccccccccCCHHHcCC-----CCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 68899999999987654211000 01122445689999998763 34678999999999999999999887421
Q ss_pred h-------------hhc---------------cC-------------------------------CCCcchHHHHHHHhc
Q 004025 245 E-------------LRN---------------TA-------------------------------SIPKSLLPDYQRLLS 265 (778)
Q Consensus 245 ~-------------l~~---------------~~-------------------------------~iP~~L~~~i~~lL~ 265 (778)
+ +.. .. ..+..+.+++++||.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~ 299 (317)
T cd07868 220 QEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLT 299 (317)
T ss_pred cccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhc
Confidence 1 000 00 012236678999999
Q ss_pred cCCCCCCChHHHHhcc
Q 004025 266 SMPSRRLNSSKLIENS 281 (778)
Q Consensus 266 ~dP~~Rps~~~lL~~~ 281 (778)
.||.+|+|+.++|+|+
T Consensus 300 ~dP~~R~t~~e~l~hp 315 (317)
T cd07868 300 MDPIKRITSEQAMQDP 315 (317)
T ss_pred cCcccCCCHHHHhcCC
Confidence 9999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-32 Score=301.43 Aligned_cols=237 Identities=17% Similarity=0.219 Sum_probs=185.8
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..|++.++||.|+ | +||+|+++.+|+.|+||++.... .+.....+.+|+++|+.++||||++++++++.+
T Consensus 74 ~~~~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------ 144 (353)
T PLN00034 74 SELERVNRIGSGAGG--TVYKVIHRPTGRLYALKVIYGNH-EDTVRRQICREIEILRDVNHPNVVKCHDMFDHN------ 144 (353)
T ss_pred HHHhhhhhccCCCCe--EEEEEEECCCCCEEEEEEEecCC-cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccC------
Confidence 3688999999998 8 99999999999999999997543 334456788999999999999999999999764
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+|+||||+ ++|.... . .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 145 --~~~~lv~e~~~~~~L~~~~----~---~~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~~~kL~DfG~ 214 (353)
T PLN00034 145 --GEIQVLLEFMDGGSLEGTH----I---ADEQFLADVARQILSGIAYLHR-RHIVHRDIKPSNLLINSAKNVKIADFGV 214 (353)
T ss_pred --CeEEEEEecCCCCcccccc----c---CCHHHHHHHHHHHHHHHHHHHH-CCEeecCCCHHHEEEcCCCCEEEccccc
Confidence 3899999999 3554321 1 1233455679999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh--------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~-------- 247 (778)
+..+...... .....++..|++||++...... ......++|+|||||++|||++|+.+|......
T Consensus 215 ~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~-~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~ 287 (353)
T PLN00034 215 SRILAQTMDP------CNSSVGTIAYMSPERINTDLNH-GAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCA 287 (353)
T ss_pred ceeccccccc------ccccccCccccCcccccccccc-CcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHH
Confidence 8876532110 0112345689999987542110 123446899999999999999999988522110
Q ss_pred --------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 --------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 --------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++.+||..||.+||++.++++|+
T Consensus 288 ~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp 329 (353)
T PLN00034 288 ICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHP 329 (353)
T ss_pred HhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 0134567789999999999999999999999998
|
|
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=299.86 Aligned_cols=230 Identities=16% Similarity=0.212 Sum_probs=183.6
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~ly 103 (778)
.||.|+ | +||+++++.+|..|+||++..... .......+.+|+++++.++||||+++++.++.+ ..+|
T Consensus 2 ~lG~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~--------~~~~ 71 (323)
T cd05595 2 LLGKGTFG--KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH--------DRLC 71 (323)
T ss_pred eeeeCCCE--EEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecC--------CEEE
Confidence 577787 7 999999999999999999986422 123455677899999999999999999999864 3899
Q ss_pred EEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCC
Q 004025 104 IVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (778)
Q Consensus 104 IVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~ 181 (778)
|||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++.....
T Consensus 72 lv~E~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~-~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 147 (323)
T cd05595 72 FVMEYANGGELFFHLSRERV---FTEERARFYGAEIVSALEYLHS-RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 147 (323)
T ss_pred EEEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHEEEcCCCCEEecccHHhccccC
Confidence 999999 478888876542 2344566678999999999996 8999999999999999999999999999875432
Q ss_pred CCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh--------c----c
Q 004025 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------N----T 249 (778)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~--------~----~ 249 (778)
... ......++..|+|||++.+ ..++.++|+|||||++|||++|..||...... . .
T Consensus 148 ~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p 215 (323)
T cd05595 148 DGA------TMKTFCGTPEYLAPEVLED------NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP 215 (323)
T ss_pred CCC------ccccccCCcCcCCcccccC------CCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC
Confidence 111 0111234568999999876 35678999999999999999999887532211 1 1
Q ss_pred CCCCcchHHHHHHHhccCCCCCC-----ChHHHHhcc
Q 004025 250 ASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENS 281 (778)
Q Consensus 250 ~~iP~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~ 281 (778)
..+++.+.+++.+||..+|.+|+ ++.++++|+
T Consensus 216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~ 252 (323)
T cd05595 216 RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHR 252 (323)
T ss_pred CCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCC
Confidence 34567788999999999999998 899999997
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-32 Score=300.91 Aligned_cols=240 Identities=16% Similarity=0.256 Sum_probs=189.3
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.||.|+ | +||+|.++.++..|+||++............+.+|+++|+.++||||+++++++...... .
T Consensus 15 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~--~ 90 (343)
T cd07878 15 ERYQNLTPVGSGAYG--SVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSI--E 90 (343)
T ss_pred hhhhhheecccCCCe--EEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccc--c
Confidence 4799999999998 8 999999999999999999976533333455677999999999999999999988643211 0
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
....+|+++|++ ++|..+++... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 91 ~~~~~~~~~~~~~~~l~~~~~~~~----l~~~~~~~i~~qi~~aL~~LH~-~~ivHrdikp~Nil~~~~~~~kl~Dfg~~ 165 (343)
T cd07878 91 NFNEVYLVTNLMGADLNNIVKCQK----LSDEHVQFLIYQLLRGLKYIHS-AGIIHRDLKPSNVAVNEDCELRILDFGLA 165 (343)
T ss_pred ccCcEEEEeecCCCCHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHH-CCeecccCChhhEEECCCCCEEEcCCccc
Confidence 124689999999 46877776433 2344567779999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----h-----
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R----- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~----- 247 (778)
....... ....++..|+|||++.+. ..++.++|+|||||++|+|++|..||..... .
T Consensus 166 ~~~~~~~---------~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~ 231 (343)
T cd07878 166 RQADDEM---------TGYVATRWYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEV 231 (343)
T ss_pred eecCCCc---------CCccccccccCchHhcCC-----ccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Confidence 8764321 122455689999998653 3567899999999999999999988753210 0
Q ss_pred ----------------------cc------------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ----------------------NT------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ----------------------~~------------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. ...++.+.+++.+||..||.+||++.++++|+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp 299 (343)
T cd07878 232 VGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHP 299 (343)
T ss_pred hCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence 00 01233467889999999999999999999998
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=300.02 Aligned_cols=238 Identities=17% Similarity=0.217 Sum_probs=202.8
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
....|+..+.||.|. | .||+|.+..+++.||||+++.....+ ..+.++.|+..|..++||||.+||++|...
T Consensus 11 ~~~~~~~~~~IgrGsfG--~Vyk~~d~~t~k~vAiKii~Le~~~d-eIediqqei~~Ls~~~~~~it~yygsyl~g---- 83 (467)
T KOG0201|consen 11 PELLYTKLELIGRGSFG--EVYKAIDNKTKKVVAIKIIDLEEAED-EIEDIQQEISVLSQCDSPNITEYYGSYLKG---- 83 (467)
T ss_pred cccccccchhccccccc--eeeeeeeccccceEEEEEechhhcch-hhHHHHHHHHHHHhcCcchHHhhhhheeec----
Confidence 456799999999999 9 99999999999999999999875554 467789999999999999999999999874
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..++|+|||| +++.+.|+..... .+..+.+++++++.||.|||. .+.+|||||+.||++..+|.+||+||
T Consensus 84 ----~~LwiiMey~~gGsv~~lL~~~~~~---~E~~i~~ilre~l~~l~ylH~-~~kiHrDIKaanil~s~~g~vkl~Df 155 (467)
T KOG0201|consen 84 ----TKLWIIMEYCGGGSVLDLLKSGNIL---DEFEIAVILREVLKGLDYLHS-EKKIHRDIKAANILLSESGDVKLADF 155 (467)
T ss_pred ----ccHHHHHHHhcCcchhhhhccCCCC---ccceeeeehHHHHHHhhhhhh-cceecccccccceeEeccCcEEEEec
Confidence 4899999999 5788888876643 233467779999999999996 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh-hhhccC--
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-ELRNTA-- 250 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~-~l~~~~-- 250 (778)
|++..+... ......+++++.|||||++++ ..|..++||||||++.|||.+|.||+..- ..+-+.
T Consensus 156 gVa~ql~~~------~~rr~tfvGTPfwMAPEVI~~------~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflI 223 (467)
T KOG0201|consen 156 GVAGQLTNT------VKRRKTFVGTPFWMAPEVIKQ------SGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLI 223 (467)
T ss_pred ceeeeeech------hhccccccccccccchhhhcc------ccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEec
Confidence 999888763 223455677789999999996 57899999999999999999999987542 232222
Q ss_pred ----------CCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 251 ----------SIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 251 ----------~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.+.+.+.+++..||+.||+.||++.++|+|.
T Consensus 224 pk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~ 264 (467)
T KOG0201|consen 224 PKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHK 264 (467)
T ss_pred cCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhH
Confidence 3445688999999999999999999999996
|
|
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-32 Score=311.31 Aligned_cols=252 Identities=19% Similarity=0.207 Sum_probs=199.1
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|.+.+.||.|+ | +||.|+++.+|+.||||++......+.....+.+|+..|..++|+||+++++.+.......
T Consensus 30 ~~~rY~i~~~LG~G~fG--~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 30 QAKKYWISRVLGSGATG--TVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cCCCEEEEEEEecCCCE--EEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 446899999999998 8 9999999999999999999876555556677889999999999999999998876432111
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcC-CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLE-GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~-~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
......+|+||||+ ++|.++|+..... .......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~-~~IiHrDLKP~NILl~~~~~vkL~D 186 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHS-KHMIHRDIKSANILLCSNGLVKLGD 186 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEEeCCCCEEEEe
Confidence 01123589999999 5899998764322 223344566779999999999996 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN---- 248 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~---- 248 (778)
||+++.+....... ......++..|+|||++.+ ..++.++|+|||||++|||++|..||.......
T Consensus 187 FGls~~~~~~~~~~----~~~~~~Gt~~Y~aPE~~~~------~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~ 256 (496)
T PTZ00283 187 FGFSKMYAATVSDD----VGRTFCGTPYYVAPEIWRR------KPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHK 256 (496)
T ss_pred cccCeecccccccc----ccccccCCcceeCHHHhCC------CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence 99987664321100 0112245568999999876 357789999999999999999999986533211
Q ss_pred ---------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ---------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ---------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+|..+..++.+||+.+|.+||++.++++|+
T Consensus 257 ~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p 298 (496)
T PTZ00283 257 TLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMP 298 (496)
T ss_pred HhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCH
Confidence 134567788999999999999999999999998
|
|
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-33 Score=301.51 Aligned_cols=243 Identities=15% Similarity=0.143 Sum_probs=193.0
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.||.|+ | +||+++++.+|+.|+||++.+... .......+.+|+.+++.++||||+++++.++.+
T Consensus 2 ~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~------ 73 (330)
T cd05601 2 DFDVKSLVGRGHFG--EVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDK------ 73 (330)
T ss_pred CceEEEEEEeccCE--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecC------
Confidence 599999999998 8 999999999999999999986432 223456788999999999999999999999864
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+||||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~qi~~aL~~lH~-~~i~H~Dlkp~NIll~~~~~~kL~Dfg~ 148 (330)
T cd05601 74 --DNLYLVMEYQPGGDLLSLLNRYED--QFDEDMAQFYLAELVLAIHSVHQ-MGYVHRDIKPENVLIDRTGHIKLADFGS 148 (330)
T ss_pred --CeEEEEECCCCCCCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH-CCeEcccCchHheEECCCCCEEeccCCC
Confidence 3899999999 579999877521 12344566679999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----hc---
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN--- 248 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~~--- 248 (778)
+..+..... .......++..|+|||++..........++.++|+|||||++|||++|..||..... ..
T Consensus 149 a~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~ 223 (330)
T cd05601 149 AARLTANKM-----VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMN 223 (330)
T ss_pred CeECCCCCc-----eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHc
Confidence 987654221 111122345689999998642111124567899999999999999999998853211 11
Q ss_pred ---------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ---------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ---------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++++||. +|.+|+++.++++|+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~ 264 (330)
T cd05601 224 FQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHP 264 (330)
T ss_pred CCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCC
Confidence 12456678889999997 999999999999998
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-33 Score=262.80 Aligned_cols=238 Identities=19% Similarity=0.308 Sum_probs=199.0
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..|...++||+|. | +||+|+.+++++.|++|.......++.....+.+|+-+||.|+|.||++++|....+
T Consensus 2 ~~ydkmekigegtyg--tvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsd------ 73 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYG--TVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD------ 73 (292)
T ss_pred cchHHHHhhcCCcce--eeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccC------
Confidence 3588889999999 9 999999999999999999998777777777899999999999999999999999875
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
+.+-+|+||| .+|..++...+ +....+.++..+.|+++||.|+|+ .++.||||||.|.+|+.+|++||.|||++
T Consensus 74 --kkltlvfe~cdqdlkkyfdsln--g~~d~~~~rsfmlqllrgl~fchs-hnvlhrdlkpqnllin~ngelkladfgla 148 (292)
T KOG0662|consen 74 --KKLTLVFEFCDQDLKKYFDSLN--GDLDPEIVRSFMLQLLRGLGFCHS-HNVLHRDLKPQNLLINRNGELKLADFGLA 148 (292)
T ss_pred --ceeEEeHHHhhHHHHHHHHhcC--CcCCHHHHHHHHHHHHhhhhhhhh-hhhhhccCCcceEEeccCCcEEecccchh
Confidence 3899999999 68999988754 334456667779999999999996 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccc-cccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChh----hhhcc-
Q 004025 177 SEFDGNNEAANGPMLQYA-WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTE----ELRNT- 249 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~-~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~----~l~~~- 249 (778)
+.+.- |+..|. -+++..|+||.++-+. +-|+.++||||-||++.|+.+ |.++|... +++.+
T Consensus 149 rafgi-------pvrcysaevvtlwyrppdvlfga-----kly~tsidmwsagcifaelanagrplfpg~dvddqlkrif 216 (292)
T KOG0662|consen 149 RAFGI-------PVRCYSAEVVTLWYRPPDVLFGA-----KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIF 216 (292)
T ss_pred hhcCC-------ceEeeeceeeeeeccCcceeeee-----ehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHH
Confidence 98764 444443 3556799999999875 678899999999999999998 55777543 22211
Q ss_pred --------------C----------------------CCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 250 --------------A----------------------SIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 250 --------------~----------------------~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ++...-+++++++|.-+|.+|++++..++|+
T Consensus 217 ~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhp 284 (292)
T KOG0662|consen 217 RLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHP 284 (292)
T ss_pred HHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCc
Confidence 1 1112346778999999999999999999998
|
|
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=299.21 Aligned_cols=230 Identities=17% Similarity=0.217 Sum_probs=183.5
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~ly 103 (778)
.||.|+ | +||.++++.+|+.|+||++.+... .......+.+|+++|+.++||||+++++.++.+ ..+|
T Consensus 2 ~lG~G~~g--~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--------~~~~ 71 (328)
T cd05593 2 LLGKGTFG--KVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTK--------DRLC 71 (328)
T ss_pred eeeeCCCE--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcC--------CEEE
Confidence 467777 7 999999999999999999986432 223456678899999999999999999999864 4899
Q ss_pred EEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCC
Q 004025 104 IVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (778)
Q Consensus 104 IVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~ 181 (778)
|||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++.....
T Consensus 72 lv~Ey~~~g~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~LH~-~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~ 147 (328)
T cd05593 72 FVMEYVNGGELFFHLSRERV---FSEDRTRFYGAEIVSALDYLHS-GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGIT 147 (328)
T ss_pred EEEeCCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeEecccCHHHeEECCCCcEEEecCcCCccCCC
Confidence 999999 478888766432 2344466679999999999995 8999999999999999999999999999875432
Q ss_pred CCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh----c--------c
Q 004025 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----N--------T 249 (778)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~----~--------~ 249 (778)
... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||...... . .
T Consensus 148 ~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p 215 (328)
T cd05593 148 DAA------TMKTFCGTPEYLAPEVLED------NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFP 215 (328)
T ss_pred ccc------ccccccCCcCccChhhhcC------CCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCC
Confidence 110 0112245568999999876 35678999999999999999999988532211 1 1
Q ss_pred CCCCcchHHHHHHHhccCCCCCC-----ChHHHHhcc
Q 004025 250 ASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENS 281 (778)
Q Consensus 250 ~~iP~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~ 281 (778)
..++..+.+++++||..||.+|+ ++.++++|+
T Consensus 216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~ 252 (328)
T cd05593 216 RTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHS 252 (328)
T ss_pred CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCC
Confidence 24556788899999999999997 899999997
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=304.45 Aligned_cols=243 Identities=14% Similarity=0.142 Sum_probs=192.9
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
...+|++.+.||.|+ | +||+++++.++..|+||++.+... .......+.+|+.+++.++||||++++++++++
T Consensus 41 ~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~--- 115 (370)
T cd05596 41 KAEDFDVIKVIGRGAFG--EVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDD--- 115 (370)
T ss_pred CHHHcEEEEEEeeCCCE--EEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecC---
Confidence 345799999999998 8 999999999999999999975321 123345578899999999999999999999864
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
.++||||||| ++|..++..... ...++..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 116 -----~~~~lv~Ey~~gg~L~~~l~~~~l----~~~~~~~~~~qi~~aL~~LH~-~~ivHrDLkp~NILl~~~~~~kL~D 185 (370)
T cd05596 116 -----KYLYMVMEYMPGGDLVNLMSNYDI----PEKWARFYTAEVVLALDAIHS-MGFIHRDVKPDNMLLDKSGHLKLAD 185 (370)
T ss_pred -----CEEEEEEcCCCCCcHHHHHHhcCC----CHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHEEEcCCCCEEEEe
Confidence 4899999999 579998876542 244566668999999999995 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----hc
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN 248 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~~ 248 (778)
||++........ .......++..|+|||++.+.-. ...++.++|+|||||++|||++|..||..... ..
T Consensus 186 fG~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~--~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~ 258 (370)
T cd05596 186 FGTCMKMDANGM-----VRCDTAVGTPDYISPEVLKSQGG--DGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSK 258 (370)
T ss_pred ccceeeccCCCc-----ccCCCCCCCcCeECHHHhccCCC--CCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHH
Confidence 999987643211 11122345668999999865210 12367799999999999999999999864321 11
Q ss_pred c------------CCCCcchHHHHHHHhccCCCC--CCChHHHHhcc
Q 004025 249 T------------ASIPKSLLPDYQRLLSSMPSR--RLNSSKLIENS 281 (778)
Q Consensus 249 ~------------~~iP~~L~~~i~~lL~~dP~~--Rps~~~lL~~~ 281 (778)
+ ..++..+.+++++||..+|.+ |+++.++++|+
T Consensus 259 i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~ 305 (370)
T cd05596 259 IMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHP 305 (370)
T ss_pred HHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCc
Confidence 1 135667888999999999987 99999999998
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-32 Score=290.59 Aligned_cols=240 Identities=18% Similarity=0.263 Sum_probs=190.2
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
+-..|++.++||.|+ | .||+|+++.+++.|+||.+...... .....+.+|+.+++.|+||||++++++++.+
T Consensus 4 ~~~~y~~~~~lg~g~~g--~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~---- 76 (301)
T cd07873 4 KLETYIKLDKLGEGTYA--TVYKGRSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHTE---- 76 (301)
T ss_pred cccceEEeeEeccCcCE--EEEEEEEcCCCcEEEEEEEeccccc-CchhHHHHHHHHHHhcCCCCcceEEEEEecC----
Confidence 345799999999998 7 8999999999999999999754332 2234567899999999999999999999864
Q ss_pred CCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+|+||||+ ++|..++..... ......+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||
T Consensus 77 ----~~~~lv~e~~~~~l~~~l~~~~~--~~~~~~~~~~~~qi~~aL~~lH~-~~i~H~dlkp~Nil~~~~~~~kl~dfg 149 (301)
T cd07873 77 ----KSLTLVFEYLDKDLKQYLDDCGN--SINMHNVKLFLFQLLRGLNYCHR-RKVLHRDLKPQNLLINERGELKLADFG 149 (301)
T ss_pred ----CeEEEEEeccccCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHh-CCeeCCCCCHHHEEECCCCcEEECcCc
Confidence 4899999999 578888765432 12344566679999999999995 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh-------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------- 247 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------- 247 (778)
++......... ......+..|+|||++.+. ..++.++|+|||||++|+|++|.++|......
T Consensus 150 ~~~~~~~~~~~------~~~~~~~~~y~~PE~~~~~-----~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~ 218 (301)
T cd07873 150 LARAKSIPTKT------YSNEVVTLWYRPPDILLGS-----TDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIF 218 (301)
T ss_pred chhccCCCCCc------ccccceeecccCcHHHhCC-----CCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 98765432110 1112335589999997653 34667899999999999999999887532110
Q ss_pred -----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -----------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++.+||..||.+||++.++++|+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~ 287 (301)
T cd07873 219 RILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHP 287 (301)
T ss_pred HHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 0013456678899999999999999999999998
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=299.30 Aligned_cols=238 Identities=17% Similarity=0.251 Sum_probs=187.6
Q ss_pred CceeccCCCCCC-CceEEEEeEEC---CCCCcEEEEEEeCCCC--chhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSK---DDGSPVSIFSISGTNA--QDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVEN 92 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k---~~g~~VaIK~~~~~~~--~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~ 92 (778)
+|++.+.||.|+ | +||.+++. .++..|+||++.+... .....+.+.+|+++|+.++ ||||+++++.++.+
T Consensus 1 ~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~- 77 (332)
T cd05614 1 NFELLKVLGTGAYG--KVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTE- 77 (332)
T ss_pred CceEEEEEeecCCE--EEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecC-
Confidence 599999999998 8 88888764 5789999999975321 2234566789999999995 99999999999864
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEE
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
..+|+||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||
T Consensus 78 -------~~~~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~-~~ivHrDlkp~Nili~~~~~~kl 146 (332)
T cd05614 78 -------AKLHLILDYVSGGEMFTHLYQRDN---FSEDEVRFYSGEIILALEHLHK-LGIVYRDIKLENILLDSEGHVVL 146 (332)
T ss_pred -------CEEEEEEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCcEecCCCHHHeEECCCCCEEE
Confidence 3899999999 579888876542 2344566679999999999995 89999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-----
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----- 245 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----- 245 (778)
+|||+++.+...... ......++..|+|||++.+. ..++.++|+|||||++|||++|..||....
T Consensus 147 ~DfG~~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~-----~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~ 216 (332)
T cd05614 147 TDFGLSKEFLSEEKE-----RTYSFCGTIEYMAPEIIRGK-----GGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQ 216 (332)
T ss_pred eeCcCCccccccCCC-----ccccccCCccccCHHHhcCC-----CCCCCccccccchhhhhhhhcCCCCCCCCCCCCCH
Confidence 999998765432111 11123455689999998753 245678999999999999999999885311
Q ss_pred --hh-c--------cCCCCcchHHHHHHHhccCCCCCC-----ChHHHHhcc
Q 004025 246 --LR-N--------TASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENS 281 (778)
Q Consensus 246 --l~-~--------~~~iP~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~ 281 (778)
+. . ...++..+.+++.+||+.||++|+ ++.++++|+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~ 268 (332)
T cd05614 217 SEVSRRILKCDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHP 268 (332)
T ss_pred HHHHHHHhcCCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCC
Confidence 10 0 124566788999999999999999 788999998
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=306.45 Aligned_cols=193 Identities=22% Similarity=0.286 Sum_probs=167.6
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-C-----CCeeeEeeeeEecc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-H-----PNILAFLHSTEVEN 92 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-H-----PnIlk~~d~~e~e~ 92 (778)
+|+|.+.||.|. | .|.+|.++.+++.||||+++.+ .....+...|+++|..|+ | -|||+++|+|..
T Consensus 187 rY~V~e~LGkGtFG--QVvk~~d~~T~e~VAIKIiKN~---k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~f-- 259 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFG--QVVKAYDHKTGEIVAIKIIKNK---KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYF-- 259 (586)
T ss_pred EEEEEEEecccccc--eeEEEEecCCCcEEEEEeeccC---hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccc--
Confidence 789999999999 9 9999999999999999999753 346678889999999998 3 379999999987
Q ss_pred cccCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC--CcEE
Q 004025 93 IDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT--LDWK 169 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~--g~~K 169 (778)
+.++|||+|.. .+|+++|+.....+.. ...++.++.||+.||.||| +.+||||||||+||++... ..+|
T Consensus 260 ------r~HlciVfELL~~NLYellK~n~f~Gls-l~~ir~~~~Qil~~L~~L~-~l~IIHcDLKPENILL~~~~r~~vK 331 (586)
T KOG0667|consen 260 ------RNHLCIVFELLSTNLYELLKNNKFRGLS-LPLVRKFAQQILTALLFLH-ELGIIHCDLKPENILLKDPKRSRIK 331 (586)
T ss_pred ------ccceeeeehhhhhhHHHHHHhcCCCCCC-HHHHHHHHHHHHHHHHHHH-hCCeeeccCChhheeeccCCcCcee
Confidence 45999999999 6899999998877643 4457888999999999999 4999999999999999743 4799
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSK 242 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~ 242 (778)
++|||.++..... .+.++...-|+|||++.+ ..|..++|||||||++.||++|.++|.
T Consensus 332 VIDFGSSc~~~q~---------vytYiQSRfYRAPEVILG------lpY~~~IDmWSLGCIlAEL~tG~PLfp 389 (586)
T KOG0667|consen 332 VIDFGSSCFESQR---------VYTYIQSRFYRAPEVILG------LPYDTAIDMWSLGCILAELFTGEPLFP 389 (586)
T ss_pred EEecccccccCCc---------ceeeeeccccccchhhcc------CCCCCccceeehhhhHHhHhcCccccC
Confidence 9999999887652 224567778999999998 478899999999999999999998874
|
|
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-31 Score=280.11 Aligned_cols=238 Identities=16% Similarity=0.144 Sum_probs=192.8
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.++.|. | .||+|+++.+++.|++|.+............+.+|+++++.++||||+++++.+..+
T Consensus 1 ~~~~~~~l~~g~~~--~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 71 (256)
T cd08529 1 DFEILNKIGKGSFG--VVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDK------- 71 (256)
T ss_pred CceEeEEecCCCCe--EEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccC-------
Confidence 488899999987 6 899999999999999999986544455567788999999999999999999999864
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|+||||+ ++|.+++...... ......+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+|||++
T Consensus 72 -~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~i~~~l~~al~~lH~-~~i~h~dl~~~nili~~~~~~~l~df~~~ 148 (256)
T cd08529 72 -GKLNIVMEYAENGDLHKLLKMQRGR-PLPEDQVWRFFIQILLGLAHLHS-KKILHRDIKSLNLFLDAYDNVKIGDLGVA 148 (256)
T ss_pred -CEEEEEEEeCCCCcHHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCcceEEEeCCCCEEEcccccc
Confidence 4899999999 4799998775221 22334456668899999999995 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh---------
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~--------- 247 (778)
..+...... .....+...|+|||+..+. .++.++|+|||||++|+|++|..||......
T Consensus 149 ~~~~~~~~~------~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 216 (256)
T cd08529 149 KLLSDNTNF------ANTIVGTPYYLSPELCEDK------PYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRG 216 (256)
T ss_pred eeccCccch------hhccccCccccCHHHhcCC------CCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Confidence 876542110 1112344579999998763 4667899999999999999999887543210
Q ss_pred cc----CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 NT----ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ~~----~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. ..++..+.+++.+|++.+|.+||++.++++|+
T Consensus 217 ~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~ 254 (256)
T cd08529 217 VFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNP 254 (256)
T ss_pred CCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhCC
Confidence 01 24567789999999999999999999999997
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-31 Score=281.95 Aligned_cols=239 Identities=14% Similarity=0.195 Sum_probs=190.7
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch---hHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD---GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~---~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
+|++++.+|.|+ | .||.|+++.++++|+||.+....... .....+.+|++++++++||||++++++++.+
T Consensus 3 ~~~~~~~lg~g~~~--~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---- 76 (263)
T cd06625 3 NWRRGKLLGQGAFG--RVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDD---- 76 (263)
T ss_pred cccccceecCCCce--EEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccC----
Confidence 699999999998 8 89999999999999999987543222 2356788999999999999999999999864
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..+|+|+||+ +.|.+++..... .....+..+++||+.||.|||. .+++||||+|+||+++.+|.+||+||
T Consensus 77 ----~~~~~v~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~l~~~l~~lH~-~~i~H~dl~p~nilv~~~~~~~l~df 148 (263)
T cd06625 77 ----ETLSIFMEYMPGGSVKDQLKAYGA---LTETVTRKYTRQILEGVEYLHS-NMIVHRDIKGANILRDSAGNVKLGDF 148 (263)
T ss_pred ----CeEEEEEEECCCCcHHHHHHHhCC---CCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCCCEEEeec
Confidence 3899999999 468888876543 2344456679999999999995 99999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------ 247 (778)
|++............ .....+...|+|||++.+. .++.++|+|||||++|||++|+.||...+..
T Consensus 149 g~~~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~ 219 (263)
T cd06625 149 GASKRLQTICSSGTG---MKSVTGTPYWMSPEVISGE------GYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKI 219 (263)
T ss_pred ccceecccccccccc---ccCCCcCccccCcceeccC------CCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHH
Confidence 998765432110000 0112234589999998863 4678999999999999999999887532110
Q ss_pred ----c----cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ----N----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ----~----~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ...++..+.+++++||..+|.+||++.++++|+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~ 261 (263)
T cd06625 220 ATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHF 261 (263)
T ss_pred hccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCC
Confidence 0 124566788999999999999999999999997
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-33 Score=275.04 Aligned_cols=242 Identities=19% Similarity=0.276 Sum_probs=199.4
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
.-.+|++|+.+|.|- | .||.|+.+.++-.|++|++.++.... ....++++|+.+-..|+||||++.|..|.++
T Consensus 20 ~l~dfeigr~LgkgkFG--~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~--- 94 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFG--NVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDS--- 94 (281)
T ss_pred chhhccccccccCCccc--cEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheecc---
Confidence 345799999999988 9 99999999999999999999865333 3456789999999999999999999999975
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+|+++||. +.|...|......... +.+-+-+++|++.||.|+|. ++++||||||+|++++.+|.+||+|
T Consensus 95 -----~riyLilEya~~gel~k~L~~~~~~~f~-e~~~a~Yi~q~A~Al~y~h~-k~VIhRdiKpenlLlg~~~~lkiAd 167 (281)
T KOG0580|consen 95 -----KRIYLILEYAPRGELYKDLQEGRMKRFD-EQRAATYIKQLANALLYCHL-KRVIHRDIKPENLLLGSAGELKIAD 167 (281)
T ss_pred -----ceeEEEEEecCCchHHHHHHhccccccc-ccchhHHHHHHHHHHHHhcc-CCcccCCCCHHHhccCCCCCeeccC
Confidence 4899999999 5699998854422111 11223349999999999995 9999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN---- 248 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~---- 248 (778)
||.+..-.. + .+...+++..|.|||+..+ ..++..+|+|++|++.||++.|.+||....-..
T Consensus 168 fGwsV~~p~-~-------kR~tlcgt~dyl~pEmv~~------~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkr 233 (281)
T KOG0580|consen 168 FGWSVHAPS-N-------KRKTLCGTLDYLPPEMVEG------RGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKR 233 (281)
T ss_pred CCceeecCC-C-------CceeeecccccCCHhhcCC------CCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHH
Confidence 998765432 1 1223355669999999988 577889999999999999999999997654222
Q ss_pred --------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcccCCcccc
Q 004025 249 --------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMT 288 (778)
Q Consensus 249 --------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~ 288 (778)
...|+....+++.+|+..+|..|....++++|+ |+.
T Consensus 234 I~k~~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hp----wI~ 277 (281)
T KOG0580|consen 234 IRKVDLKFPSTISGGAADLISRLLVKNPIERLALTEVMDHP----WIV 277 (281)
T ss_pred HHHccccCCcccChhHHHHHHHHhccCccccccHHHHhhhH----HHH
Confidence 146777889999999999999999999999998 764
|
|
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=299.97 Aligned_cols=231 Identities=16% Similarity=0.205 Sum_probs=183.7
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~ly 103 (778)
.||.|+ | +||.++++.+|..|+||++.+... .......+.+|+++++.++||||+++++.++.+ ..+|
T Consensus 2 ~lG~G~~g--~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~--------~~~~ 71 (325)
T cd05594 2 LLGKGTFG--KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTH--------DRLC 71 (325)
T ss_pred eeeeCCCE--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcC--------CEEE
Confidence 577887 8 999999999999999999986422 123345677899999999999999999999864 4899
Q ss_pred EEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCC
Q 004025 104 IVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (778)
Q Consensus 104 IVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~ 181 (778)
|||||+ ++|..++..... .....+..++.||+.||.|||+..+++||||||+||+++.+|.+||+|||++.....
T Consensus 72 lv~E~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~ 148 (325)
T cd05594 72 FVMEYANGGELFFHLSRERV---FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 148 (325)
T ss_pred EEEeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCC
Confidence 999999 478888766442 234446667899999999999547999999999999999999999999999875432
Q ss_pred CCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh------------cc
Q 004025 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------------NT 249 (778)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------------~~ 249 (778)
.... .....++..|+|||++.+ ..++.++|+|||||++|||++|..||...... -.
T Consensus 149 ~~~~------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p 216 (325)
T cd05594 149 DGAT------MKTFCGTPEYLAPEVLED------NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP 216 (325)
T ss_pred CCcc------cccccCCcccCCHHHHcc------CCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCC
Confidence 2110 111235568999999876 35678999999999999999999888532211 01
Q ss_pred CCCCcchHHHHHHHhccCCCCCC-----ChHHHHhcc
Q 004025 250 ASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENS 281 (778)
Q Consensus 250 ~~iP~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~ 281 (778)
..+++.+.+++++||..||.+|+ ++.++++|+
T Consensus 217 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~ 253 (325)
T cd05594 217 RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHK 253 (325)
T ss_pred CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCC
Confidence 24567788999999999999997 899999998
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-32 Score=303.24 Aligned_cols=242 Identities=11% Similarity=0.142 Sum_probs=187.9
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.|++.+.||.|+ | +||+|+++.+++.|+||++.+... .......+++|+++|+.++||||+++++.+++.
T Consensus 2 ~f~~~~~LG~G~~g--~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~------ 73 (381)
T cd05626 2 MFVKIKTLGIGAFG--EVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDK------ 73 (381)
T ss_pred CceEEEEEeecCCE--EEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecC------
Confidence 589999999998 8 999999999999999999986432 224566789999999999999999999999864
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
.++||||||| ++|.+++..... .....++.++.||+.||.|||+ .+|+||||||+||+|+.+|.+||+|||+
T Consensus 74 --~~~~lv~E~~~gg~L~~~l~~~~~---~~e~~~~~~~~qi~~aL~~LH~-~givHrDlKp~Nili~~~~~~kL~DFGl 147 (381)
T cd05626 74 --DNLYFVMDYIPGGDMMSLLIRMEV---FPEVLARFYIAELTLAIESVHK-MGFIHRDIKPDNILIDLDGHIKLTDFGL 147 (381)
T ss_pred --CEEEEEEecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeeecCCcHHHEEECCCCCEEEeeCcC
Confidence 4899999999 479998876543 2344566678999999999995 9999999999999999999999999999
Q ss_pred ccccCCCCCCC---C--------------------------------------CCccccccccCCCCCCccccccccccc
Q 004025 176 LSEFDGNNEAA---N--------------------------------------GPMLQYAWLVGAQYKPVELAKSDWTAV 214 (778)
Q Consensus 176 a~~~~~~~~~~---~--------------------------------------~~~~~~~~~~~~~Y~aPE~~~~~~~~~ 214 (778)
+..+....... . .........++..|+|||++.+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~----- 222 (381)
T cd05626 148 CTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLR----- 222 (381)
T ss_pred CcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcC-----
Confidence 76442110000 0 0000112245568999999876
Q ss_pred cCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-------h---cc------CCCCcchHHHHHHHhcc--CCCCCCChHH
Q 004025 215 RKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------R---NT------ASIPKSLLPDYQRLLSS--MPSRRLNSSK 276 (778)
Q Consensus 215 ~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l-------~---~~------~~iP~~L~~~i~~lL~~--dP~~Rps~~~ 276 (778)
..++.++|+|||||++|||++|..||..... . .. ..++..+.+++.+|+.. ++..|+++.+
T Consensus 223 -~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~ 301 (381)
T cd05626 223 -KGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADD 301 (381)
T ss_pred -CCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHH
Confidence 3567899999999999999999999853211 0 01 13556678888886644 5556999999
Q ss_pred HHhcc
Q 004025 277 LIENS 281 (778)
Q Consensus 277 lL~~~ 281 (778)
+++|+
T Consensus 302 ~l~hp 306 (381)
T cd05626 302 IKAHP 306 (381)
T ss_pred HhcCc
Confidence 99998
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-32 Score=288.52 Aligned_cols=238 Identities=18% Similarity=0.248 Sum_probs=187.7
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.+|.|. | +||+|+++.+|+.|++|.+......+.....+.+|++.++.++||||+++++++...
T Consensus 1 ~y~~~~~l~~g~~~--~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~------- 71 (284)
T cd07839 1 KYEKLEKIGEGTYG--TVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSD------- 71 (284)
T ss_pred CceeEEEecccCCe--EEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccC-------
Confidence 589999999987 7 899999999999999999986544333445677899999999999999999999863
Q ss_pred ccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 99 ~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
..+|+|+||+ ++|..++..... ......+..++.||++||.|||+ .+++||||+|+||+++.+|.+||+|||++.
T Consensus 72 -~~~~lv~e~~~~~l~~~~~~~~~--~~~~~~~~~~~~qi~~al~~LH~-~~i~H~dl~~~nil~~~~~~~~l~dfg~~~ 147 (284)
T cd07839 72 -KKLTLVFEYCDQDLKKYFDSCNG--DIDPEIVKSFMFQLLKGLAFCHS-HNVLHRDLKPQNLLINKNGELKLADFGLAR 147 (284)
T ss_pred -CceEEEEecCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH-CCEecCCCCHHHEEEcCCCcEEECccchhh
Confidence 4899999999 578887765331 12344566779999999999995 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCC-Chhh----hh-----
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLS-KTEE----LR----- 247 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~-~~~~----l~----- 247 (778)
........ .....++..|+|||++.+. ..++.++|+|||||++|+|++|+.|+ .... +.
T Consensus 148 ~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~ 216 (284)
T cd07839 148 AFGIPVRC------YSAEVVTLWYRPPDVLFGA-----KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRL 216 (284)
T ss_pred ccCCCCCC------cCCCccccCCcChHHHhCC-----cccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHH
Confidence 65432110 0111334589999997653 34577899999999999999987663 2111 00
Q ss_pred --------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 --------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 --------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++++||..||.+|||+.++++|+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~ 282 (284)
T cd07839 217 LGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHP 282 (284)
T ss_pred hCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCC
Confidence 0123456678899999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-31 Score=292.34 Aligned_cols=244 Identities=14% Similarity=0.134 Sum_probs=187.6
Q ss_pred eccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccE
Q 004025 23 IGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKIT 101 (778)
Q Consensus 23 i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~ 101 (778)
+.+.||.|. +.++||.++++.+|+.|+||.++.....+...+.+++|+++++.++||||+++++++..+ ..
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~--------~~ 73 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIAD--------NE 73 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEEC--------CE
Confidence 567888886 555999999999999999999987655555667888999999999999999999999874 38
Q ss_pred EEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccccc
Q 004025 102 IYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (778)
Q Consensus 102 lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~ 179 (778)
+|+||||+ ++|.+++....... .....+.+++.||+.||.|||+ .+++||||||+||+++.++.++|+||+.+...
T Consensus 74 ~~lv~e~~~~~~l~~~~~~~~~~~-l~~~~~~~i~~qi~~~L~~LH~-~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~ 151 (327)
T cd08227 74 LWVVTSFMAYGSAKDLICTHFMDG-MSELAIAYILQGVLKALDYIHH-MGYVHRSVKASHILISVDGKVYLSGLRSNLSM 151 (327)
T ss_pred EEEEEeccCCCcHHHHHHhhccCC-CCHHHHHHHHHHHHHHHHHHHH-CCEecCCCChhhEEEecCCcEEEcccchhhcc
Confidence 99999999 57988887643221 2344567789999999999995 99999999999999999999999999876544
Q ss_pred CCCCCCCC--CCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc---------
Q 004025 180 DGNNEAAN--GPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN--------- 248 (778)
Q Consensus 180 ~~~~~~~~--~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~--------- 248 (778)
........ ... ......+..|+|||++.+.. ..++.++|+|||||++|||++|..||.......
T Consensus 152 ~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~----~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 226 (327)
T cd08227 152 INHGQRLRVVHDF-PKYSVKVLPWLSPEVLQQNL----QGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGT 226 (327)
T ss_pred ccccccccccccc-cccccceecccChHHhhccc----CCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCC
Confidence 32111000 000 01112334799999987531 246678999999999999999998875211000
Q ss_pred -------------------------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHh
Q 004025 249 -------------------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 249 -------------------------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
...++..+.+++++||+.||.+||+++++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 227 VPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred ccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 0012345778899999999999999999999
Q ss_pred cc
Q 004025 280 NS 281 (778)
Q Consensus 280 ~~ 281 (778)
|+
T Consensus 307 ~p 308 (327)
T cd08227 307 HS 308 (327)
T ss_pred Ch
Confidence 98
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.5e-32 Score=305.82 Aligned_cols=241 Identities=12% Similarity=0.174 Sum_probs=187.8
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.|++.+.||.|+ | +||+|+++.+++.|+||++.+... .......+++|+++|+.++||||+++++.++.+
T Consensus 2 ~y~~~~~lG~G~~g--~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~------ 73 (376)
T cd05598 2 MFVKIKTIGIGAFG--EVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDK------ 73 (376)
T ss_pred CceEEEEEEeCCCe--EEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcC------
Confidence 599999999998 8 999999999999999999975321 123356688999999999999999999999864
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+||||||| ++|.+++...+. .....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~E~~~~g~L~~~i~~~~~---~~~~~~~~~~~qi~~al~~lH~-~~ivHrDlkp~Nill~~~~~ikL~DFG~ 147 (376)
T cd05598 74 --DNLYFVMDYIPGGDMMSLLIRLGI---FEEDLARFYIAELTCAIESVHK-MGFIHRDIKPDNILIDRDGHIKLTDFGL 147 (376)
T ss_pred --CEEEEEEeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeEeCCCCHHHEEECCCCCEEEEeCCC
Confidence 4899999999 579999877543 2344456668999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCC-------------------------------------CCCccccccccCCCCCCccccccccccccCCC
Q 004025 176 LSEFDGNNEAA-------------------------------------NGPMLQYAWLVGAQYKPVELAKSDWTAVRKSP 218 (778)
Q Consensus 176 a~~~~~~~~~~-------------------------------------~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~ 218 (778)
+..+....... ..........++..|+|||++.+ ..+
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~ 221 (376)
T cd05598 148 CTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLR------TGY 221 (376)
T ss_pred CccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcC------CCC
Confidence 86432100000 00000011235568999999876 356
Q ss_pred CCcchhHHHHHHHHHHHhCCCCCChhhhh----c------------cCCCCcchHHHHHHHhccCCCCCC---ChHHHHh
Q 004025 219 PWSIDSWGLGCLIYELFSGMRLSKTEELR----N------------TASIPKSLLPDYQRLLSSMPSRRL---NSSKLIE 279 (778)
Q Consensus 219 ~~~~DiwSLG~liyel~tg~~p~~~~~l~----~------------~~~iP~~L~~~i~~lL~~dP~~Rp---s~~~lL~ 279 (778)
+.++|+|||||++|||++|..||...... . ...++..+.+++.+|+ .+|..|+ ++.++++
T Consensus 222 ~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~ 300 (376)
T cd05598 222 TQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKA 300 (376)
T ss_pred CcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhC
Confidence 78999999999999999999998643210 0 1235566788888876 5999999 9999999
Q ss_pred cc
Q 004025 280 NS 281 (778)
Q Consensus 280 ~~ 281 (778)
|+
T Consensus 301 h~ 302 (376)
T cd05598 301 HP 302 (376)
T ss_pred CC
Confidence 98
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.8e-32 Score=295.71 Aligned_cols=244 Identities=16% Similarity=0.177 Sum_probs=185.7
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEE-----CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeee
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTS-----KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHST 88 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~-----k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~ 88 (778)
++..+|++++.||.|+ | +||+|.+ +.++..|+||++.... .......+.+|+++|+.+ +||||+++++.+
T Consensus 4 ~~~~~~~~~~~lG~G~fg--~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~ 80 (338)
T cd05102 4 FPRDRLRLGKVLGHGAFG--KVVEASAFGIDKKSSCNTVAVKMLKEGA-TASEHKALMSELKILIHIGNHLNVVNLLGAC 80 (338)
T ss_pred cchhHceeeeEeccCCcc--eEEEEEEeccCCcccchhhheecccccc-chHHHHHHHHHHHHHHHhccCcceeeEEeEe
Confidence 3556899999999998 8 8999974 3456789999987542 223456788999999999 899999999988
Q ss_pred EecccccCCcccEEEEEecCC--cChHHHHHHhCcC--------------------------------------------
Q 004025 89 EVENIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------------------------------------------- 122 (778)
Q Consensus 89 e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~-------------------------------------------- 122 (778)
...+ ..+|+||||+ ++|.+++......
T Consensus 81 ~~~~-------~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (338)
T cd05102 81 TKPN-------GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPST 153 (338)
T ss_pred cCCC-------CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCcccccccccc
Confidence 7532 3689999999 6899988753210
Q ss_pred ---------------CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCCCCCCCC
Q 004025 123 ---------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAAN 187 (778)
Q Consensus 123 ---------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~ 187 (778)
.......+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||+++........
T Consensus 154 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~-- 230 (338)
T cd05102 154 SGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLAS-RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY-- 230 (338)
T ss_pred CcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHH-CCEECCCCccceEEEcCCCcEEEeecccccccccCcch--
Confidence 001123345568899999999995 89999999999999999999999999999866432110
Q ss_pred CCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh--------h------ccCCC
Q 004025 188 GPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL--------R------NTASI 252 (778)
Q Consensus 188 ~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l--------~------~~~~i 252 (778)
........+..|+|||++.+ ..++.++|+|||||++|||++ |..||..... . ....+
T Consensus 231 --~~~~~~~~~~~y~aPE~~~~------~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (338)
T cd05102 231 --VRKGSARLPLKWMAPESIFD------KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENA 302 (338)
T ss_pred --hcccCCCCCccccCcHHhhc------CCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCC
Confidence 00111122347999999876 356789999999999999997 8888754211 0 11245
Q ss_pred CcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 253 PKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 253 P~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
|..+..++.+||..+|..||++.++++.
T Consensus 303 ~~~l~~li~~cl~~dp~~RPs~~el~~~ 330 (338)
T cd05102 303 TPEIYRIMLACWQGDPKERPTFSALVEI 330 (338)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 6678899999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.4e-32 Score=303.08 Aligned_cols=241 Identities=14% Similarity=0.211 Sum_probs=186.9
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.||.|+ | +||+++++.+|+.|+||++.+... .......+++|+++++.++||||+++++++++.
T Consensus 2 ~y~~~~~lG~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~------ 73 (377)
T cd05629 2 DFHTVKVIGKGAFG--EVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDA------ 73 (377)
T ss_pred CceEeEEEeecCCE--EEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcC------
Confidence 699999999998 8 999999999999999999875322 223456788999999999999999999999864
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
.++||||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~E~~~gg~L~~~l~~~~~---~~~~~~~~~~~ql~~aL~~LH~-~givHrDlkp~NIll~~~~~~kl~DfGl 147 (377)
T cd05629 74 --QYLYLIMEFLPGGDLMTMLIKYDT---FSEDVTRFYMAECVLAIEAVHK-LGFIHRDIKPDNILIDRGGHIKLSDFGL 147 (377)
T ss_pred --CeeEEEEeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHEEECCCCCEEEeeccc
Confidence 4899999999 579988876542 2344566679999999999995 9999999999999999999999999999
Q ss_pred ccccCCCCCCC-----------CC------------------------------CccccccccCCCCCCccccccccccc
Q 004025 176 LSEFDGNNEAA-----------NG------------------------------PMLQYAWLVGAQYKPVELAKSDWTAV 214 (778)
Q Consensus 176 a~~~~~~~~~~-----------~~------------------------------~~~~~~~~~~~~Y~aPE~~~~~~~~~ 214 (778)
++.+....... .. ........++..|+|||++.+
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----- 222 (377)
T cd05629 148 STGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQ----- 222 (377)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHcc-----
Confidence 86432210000 00 000011235568999999876
Q ss_pred cCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hhc------cC------CCCcchHHHHHHHhccCCCCC---CChH
Q 004025 215 RKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRN------TA------SIPKSLLPDYQRLLSSMPSRR---LNSS 275 (778)
Q Consensus 215 ~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~~------~~------~iP~~L~~~i~~lL~~dP~~R---ps~~ 275 (778)
..++.++|+|||||++|||++|.+||.... ... .. .++..+.+++.+||. +|..| +++.
T Consensus 223 -~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~ 300 (377)
T cd05629 223 -QGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAH 300 (377)
T ss_pred -CCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHH
Confidence 357789999999999999999999985321 111 11 244567889999997 66655 5999
Q ss_pred HHHhcc
Q 004025 276 KLIENS 281 (778)
Q Consensus 276 ~lL~~~ 281 (778)
++++|+
T Consensus 301 ~~l~hp 306 (377)
T cd05629 301 EIKSHP 306 (377)
T ss_pred HHhcCC
Confidence 999998
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.3e-32 Score=294.54 Aligned_cols=236 Identities=18% Similarity=0.224 Sum_probs=186.3
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecccccC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~g~ 96 (778)
+|++.+.||.|+ | +||+|+++.+++.|+||++.+... .+........|.+++..+ +||+|++++++++..
T Consensus 1 df~~~~~lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~----- 73 (323)
T cd05616 1 DFNFLMVLGKGSFG--KVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTM----- 73 (323)
T ss_pred CceEEEEEeeCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecC-----
Confidence 589999999998 8 999999999999999999986432 123344566778888777 489999999999864
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+||||||+ ++|..++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 74 ---~~~~lv~E~~~~g~L~~~~~~~~~~---~~~~~~~~~~qi~~aL~~LH~-~~ivHrDlkp~Nill~~~~~~kL~DfG 146 (323)
T cd05616 74 ---DRLYFVMEYVNGGDLMYQIQQVGRF---KEPHAVFYAAEIAIGLFFLHS-KGIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred ---CEEEEEEcCCCCCCHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCEEecCCCHHHeEECCCCcEEEccCC
Confidence 3899999999 5798888765432 234456669999999999995 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------ 248 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~------ 248 (778)
++........ ......++..|+|||++.+ ..++.++|+|||||++|||++|..||.......
T Consensus 147 ~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~ 214 (323)
T cd05616 147 MCKENMWDGV------TTKTFCGTPDYIAPEIIAY------QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM 214 (323)
T ss_pred CceecCCCCC------ccccCCCChhhcCHHHhcC------CCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9875432111 1112234568999999876 357789999999999999999999986432111
Q ss_pred ------cCCCCcchHHHHHHHhccCCCCCCCh-----HHHHhcc
Q 004025 249 ------TASIPKSLLPDYQRLLSSMPSRRLNS-----SKLIENS 281 (778)
Q Consensus 249 ------~~~iP~~L~~~i~~lL~~dP~~Rps~-----~~lL~~~ 281 (778)
...++..+.+++.+||..+|.+|++. .++++|+
T Consensus 215 ~~~~~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~ 258 (323)
T cd05616 215 EHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHA 258 (323)
T ss_pred hCCCCCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCC
Confidence 12456778889999999999999985 7888887
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.2e-31 Score=283.34 Aligned_cols=239 Identities=19% Similarity=0.278 Sum_probs=192.3
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.+|.|. | .||+|+++.+|+.|+||++......+...+.+.+|+..+++++||||+++++.+...
T Consensus 1 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------- 71 (286)
T cd07832 1 RYKILGRIGEGAHG--IVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHG------- 71 (286)
T ss_pred CceEEeecccCCCc--EEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecC-------
Confidence 589999999998 8 899999999999999999987654444566788999999999999999999999863
Q ss_pred ccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 99 ~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
..+|+|+||+ ++|.+++..... ......+..++.||+.||.|||+ .+++|+||+|+||+++.+|.++|+|||++.
T Consensus 72 -~~~~~v~e~~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~ 147 (286)
T cd07832 72 -SGFVLVMEYMPSDLSEVLRDEER--PLPEAQVKSYMRMLLKGVAYMHA-NGIMHRDLKPANLLISADGVLKIADFGLAR 147 (286)
T ss_pred -CeeEEEecccCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH-CCeecCCcCHHHEEEcCCCcEEEeeeeecc
Confidence 4899999999 569888876441 12344466679999999999995 899999999999999999999999999988
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh--------h--
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------R-- 247 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l--------~-- 247 (778)
........ ......++..|+|||++.+. ..++.++|+|||||++|||++|.++|..... .
T Consensus 148 ~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~ 217 (286)
T cd07832 148 LFSEEEPR-----LYSHQVATRWYRAPELLYGA-----RKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTL 217 (286)
T ss_pred cccCCCCC-----ccccccCcccccCceeeecc-----ccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHc
Confidence 77543210 01112345589999997653 3457799999999999999999877743210 0
Q ss_pred --------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 --------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 --------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++++||..+|.+||++.++++|+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~ 283 (286)
T cd07832 218 GTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHP 283 (286)
T ss_pred CCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 0123456778899999999999999999999998
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.7e-32 Score=299.32 Aligned_cols=242 Identities=12% Similarity=0.135 Sum_probs=186.0
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.||.|+ | +||.|+++.+++.|+||++.+.... ......+++|+.+++.++||||+++++.++++
T Consensus 2 ~y~~~~~LG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~------ 73 (363)
T cd05628 2 DFESLKVIGRGAFG--EVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDK------ 73 (363)
T ss_pred CceEeEEEEeCCCE--EEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecC------
Confidence 699999999998 8 9999999999999999999764221 23456788999999999999999999999874
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+||||||| ++|.+++...+. .....++.++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~E~~~gg~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~lH~-~givHrDlKp~NILi~~~~~vkL~DFGl 147 (363)
T cd05628 74 --LNLYLIMEFLPGGDMMTLLMKKDT---LTEEETQFYIAETVLAIDSIHQ-LGFIHRDIKPDNLLLDSKGHVKLSDFGL 147 (363)
T ss_pred --CeEEEEEcCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeEecCCCHHHeEECCCCCEEEeeccC
Confidence 4899999999 479998876543 2344566779999999999995 9999999999999999999999999999
Q ss_pred ccccCCCCCCCC-----------------------------CCccccccccCCCCCCccccccccccccCCCCCcchhHH
Q 004025 176 LSEFDGNNEAAN-----------------------------GPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWG 226 (778)
Q Consensus 176 a~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwS 226 (778)
++.+........ .........++..|+|||++.+ ..++.++|+||
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~------~~~~~~~DvwS 221 (363)
T cd05628 148 CTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQ------TGYNKLCDWWS 221 (363)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcC------CCCCCchhhhh
Confidence 876543110000 0000112345568999999876 35778999999
Q ss_pred HHHHHHHHHhCCCCCChhhh----hcc------C------CCCcchHHHHHHHhcc--CCCCCCChHHHHhcc
Q 004025 227 LGCLIYELFSGMRLSKTEEL----RNT------A------SIPKSLLPDYQRLLSS--MPSRRLNSSKLIENS 281 (778)
Q Consensus 227 LG~liyel~tg~~p~~~~~l----~~~------~------~iP~~L~~~i~~lL~~--dP~~Rps~~~lL~~~ 281 (778)
|||++|||++|..||..... ..+ . .++..+.+++.+|+.. ++..||++.++++|+
T Consensus 222 lGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~hp 294 (363)
T cd05628 222 LGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTNP 294 (363)
T ss_pred hHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCCC
Confidence 99999999999999864221 111 1 2344567777776642 334568999999998
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-31 Score=296.30 Aligned_cols=241 Identities=20% Similarity=0.269 Sum_probs=201.2
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecccc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVR-HPNILAFLHSTEVENID 94 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~ 94 (778)
...|++++.||.|. | .||.++.+.+|+.+|+|++.+..... ...+.+.+|+++|++|. ||||+.+++.||+.
T Consensus 34 ~~~Y~l~~~lG~G~Fg--~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~--- 108 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFG--VVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDP--- 108 (382)
T ss_pred cccEEehhhhCCCCce--EEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcC---
Confidence 34699999999999 8 99999999999999999999865433 23568999999999998 99999999999985
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC----CcE
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT----LDW 168 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~----g~~ 168 (778)
.++|||||+| +.|.+.|.... ..+......+.||+.+++|||+ .+++||||||+|+++... +.+
T Consensus 109 -----~~~~lvmEL~~GGeLfd~i~~~~----~sE~da~~~~~~il~av~~lH~-~gvvHrDlKpEN~L~~~~~~~~~~i 178 (382)
T KOG0032|consen 109 -----DSVYLVMELCEGGELFDRIVKKH----YSERDAAGIIRQILEAVKYLHS-LGVVHRDLKPENLLLASKDEGSGRI 178 (382)
T ss_pred -----CeEEEEEEecCCchHHHHHHHcc----CCHHHHHHHHHHHHHHHHHHHh-CCceeccCCHHHeeeccccCCCCcE
Confidence 4999999999 56888887761 3344456679999999999996 999999999999999733 579
Q ss_pred EEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh-
Q 004025 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR- 247 (778)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~- 247 (778)
|++|||++...... ......++++.|+|||++.. ..+...+||||+|+++|.|++|.+||..+.-.
T Consensus 179 k~~DFGla~~~~~~-------~~~~~~~Gtp~y~APEvl~~------~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~ 245 (382)
T KOG0032|consen 179 KLIDFGLAKFIKPG-------ERLHTIVGTPEYVAPEVLGG------RPYGDEVDVWSIGVILYILLSGVPPFWGETEFE 245 (382)
T ss_pred EEeeCCCceEccCC-------ceEeeecCCccccCchhhcC------CCCCcccchhHHHHHHHHHhhCCCCCcCCChhH
Confidence 99999999887651 11233466679999999886 47888999999999999999999998654311
Q ss_pred ---------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcccCCcccccc
Q 004025 248 ---------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEY 290 (778)
Q Consensus 248 ---------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~f 290 (778)
....+...+.+++++||..||.+|+++.++|+|| |+.+.
T Consensus 246 ~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~Hp----Wi~~~ 299 (382)
T KOG0032|consen 246 IFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHP----WIKSI 299 (382)
T ss_pred HHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCc----cccCC
Confidence 1145677789999999999999999999999999 87654
|
|
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.8e-32 Score=294.80 Aligned_cols=230 Identities=15% Similarity=0.188 Sum_probs=179.1
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHH-HHhcCCCCCeeeEeeeeEecccccCCcccEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVK-RLRTVRHPNILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~-~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~l 102 (778)
.||.|+ | +||+|+++.+|+.|+||++.+.... ......+.+|.. .++.++||||+++++.++.. ..+
T Consensus 2 ~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~--------~~~ 71 (323)
T cd05575 2 VIGKGSFG--KVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTA--------DKL 71 (323)
T ss_pred eeeeCCCe--EEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeC--------CEE
Confidence 577787 7 9999999999999999999864221 122233444444 56889999999999999864 489
Q ss_pred EEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccC
Q 004025 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (778)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~ 180 (778)
|+||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++....
T Consensus 72 ~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~-~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~ 147 (323)
T cd05575 72 YFVLDYVNGGELFFHLQRERS---FPEPRARFYAAEIASALGYLHS-LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGI 147 (323)
T ss_pred EEEEcCCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeEeCCCCHHHeEECCCCcEEEeccCCCcccc
Confidence 9999999 578888876442 2344566679999999999995 899999999999999999999999999987543
Q ss_pred CCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh------------c
Q 004025 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------------N 248 (778)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------------~ 248 (778)
.... ......++..|+|||++.+ ..++.++|+|||||++|||++|..||...... .
T Consensus 148 ~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~ 215 (323)
T cd05575 148 EHSK------TTSTFCGTPEYLAPEVLRK------QPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRL 215 (323)
T ss_pred cCCC------ccccccCChhhcChhhhcC------CCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 2111 0112234568999999876 35678999999999999999999988543211 1
Q ss_pred cCCCCcchHHHHHHHhccCCCCCCCh----HHHHhcc
Q 004025 249 TASIPKSLLPDYQRLLSSMPSRRLNS----SKLIENS 281 (778)
Q Consensus 249 ~~~iP~~L~~~i~~lL~~dP~~Rps~----~~lL~~~ 281 (778)
...++..+.+++++||..+|.+|+++ .++++|+
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~ 252 (323)
T cd05575 216 KPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHV 252 (323)
T ss_pred CCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCC
Confidence 13467788999999999999999987 5889987
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.4e-32 Score=300.47 Aligned_cols=243 Identities=14% Similarity=0.150 Sum_probs=190.2
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
...+|++.+.||.|+ | .||.++++.+++.|++|++.+... .......+.+|+.+++.++||||+++++.++++
T Consensus 41 ~~~~y~~~~~lG~G~fg--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~--- 115 (370)
T cd05621 41 KAEDYDVVKVIGRGAFG--EVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDD--- 115 (370)
T ss_pred CHHHCeEEEEEEecCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcC---
Confidence 345799999999998 8 999999999999999999975322 223345678999999999999999999999874
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
.++|+||||| ++|.+++..... ....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|
T Consensus 116 -----~~~~lv~Ey~~gg~L~~~l~~~~~----~~~~~~~~~~qil~aL~~LH~-~~IvHrDLKp~NILl~~~~~~kL~D 185 (370)
T cd05621 116 -----KYLYMVMEYMPGGDLVNLMSNYDV----PEKWAKFYTAEVVLALDAIHS-MGLIHRDVKPDNMLLDKHGHLKLAD 185 (370)
T ss_pred -----CEEEEEEcCCCCCcHHHHHHhcCC----CHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHEEECCCCCEEEEe
Confidence 4899999999 579998876532 344566679999999999995 9999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----hc
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN 248 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~~ 248 (778)
||++..+..... .......++..|+|||++.+.- ....++.++|+|||||++|||++|..||..... ..
T Consensus 186 FG~a~~~~~~~~-----~~~~~~~gt~~Y~aPE~~~~~~--~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~ 258 (370)
T cd05621 186 FGTCMKMDETGM-----VRCDTAVGTPDYISPEVLKSQG--GDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSK 258 (370)
T ss_pred cccceecccCCc-----eecccCCCCcccCCHHHHhccC--CCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 999987653211 1111234566899999986521 012356799999999999999999999864321 10
Q ss_pred ------cC------CCCcchHHHHHHHhccCCCC--CCChHHHHhcc
Q 004025 249 ------TA------SIPKSLLPDYQRLLSSMPSR--RLNSSKLIENS 281 (778)
Q Consensus 249 ------~~------~iP~~L~~~i~~lL~~dP~~--Rps~~~lL~~~ 281 (778)
.. .++..+..++.+||..++.+ |+++.++++|+
T Consensus 259 i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp 305 (370)
T cd05621 259 IMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHP 305 (370)
T ss_pred HHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCc
Confidence 11 34556788889999865544 89999999998
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=5e-32 Score=302.27 Aligned_cols=241 Identities=12% Similarity=0.176 Sum_probs=187.9
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.|++.+.||.|+ | +||+|+++.+++.|+||++.+... .......+.+|+++|+.++||||+++++.+.++
T Consensus 2 ~f~~~~~LG~G~~g--~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~------ 73 (382)
T cd05625 2 MFVKIKTLGIGAFG--EVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDK------ 73 (382)
T ss_pred CcEEEEEEEeCCCE--EEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeC------
Confidence 589999999998 8 999999999999999999975422 224456788999999999999999999999864
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
.++||||||| ++|.+++.+.+. ..+..++.++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~E~~~gg~L~~~l~~~~~---~~e~~~~~~~~qi~~al~~lH~-~~ivHrDlKp~NILl~~~g~~kL~DFGl 147 (382)
T cd05625 74 --DNLYFVMDYIPGGDMMSLLIRMGI---FPEDLARFYIAELTCAVESVHK-MGFIHRDIKPDNILIDRDGHIKLTDFGL 147 (382)
T ss_pred --CEEEEEEeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECCCCCEEEeECCC
Confidence 4899999999 479888876542 2344566679999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCC-----------------------------------------CCCccccccccCCCCCCccccccccccc
Q 004025 176 LSEFDGNNEAA-----------------------------------------NGPMLQYAWLVGAQYKPVELAKSDWTAV 214 (778)
Q Consensus 176 a~~~~~~~~~~-----------------------------------------~~~~~~~~~~~~~~Y~aPE~~~~~~~~~ 214 (778)
+..+....... ..........++..|+|||++.+
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~----- 222 (382)
T cd05625 148 CTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLR----- 222 (382)
T ss_pred CccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcC-----
Confidence 86432110000 00000111234568999999876
Q ss_pred cCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----hc------------cCCCCcchHHHHHHHhccCCCCCCC---hH
Q 004025 215 RKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN------------TASIPKSLLPDYQRLLSSMPSRRLN---SS 275 (778)
Q Consensus 215 ~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~~------------~~~iP~~L~~~i~~lL~~dP~~Rps---~~ 275 (778)
..++.++|+|||||++|||++|.+||..... .. ...++..+.+++.+|+ .+|.+|++ +.
T Consensus 223 -~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ 300 (382)
T cd05625 223 -TGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGAD 300 (382)
T ss_pred -CCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHH
Confidence 3577899999999999999999999864211 00 1235566788888876 59999997 99
Q ss_pred HHHhcc
Q 004025 276 KLIENS 281 (778)
Q Consensus 276 ~lL~~~ 281 (778)
++++|+
T Consensus 301 ei~~hp 306 (382)
T cd05625 301 EIKAHP 306 (382)
T ss_pred HHhcCC
Confidence 999998
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.1e-32 Score=293.77 Aligned_cols=231 Identities=17% Similarity=0.261 Sum_probs=182.3
Q ss_pred cCCCCCC-CceEEEEeEEC---CCCCcEEEEEEeCCCC--chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 25 DPYPSAW-GSWSHFQGTSK---DDGSPVSIFSISGTNA--QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k---~~g~~VaIK~~~~~~~--~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+.||.|+ | +||.+++. .+++.|+||++.+... .......+.+|+.+|+.++||||+++++.++.+
T Consensus 2 ~~lg~G~~g--~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~------- 72 (323)
T cd05584 2 KVLGKGGYG--KVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTG------- 72 (323)
T ss_pred ceeeecCCe--EEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecC-------
Confidence 4678887 7 89998864 5688999999975321 123345678999999999999999999999874
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|+||||+ ++|.+++...+. .....+.+++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 73 -~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 147 (323)
T cd05584 73 -GKLYLILEYLSGGELFMHLEREGI---FMEDTACFYLSEISLALEHLHQ-QGIIYRDLKPENILLDAQGHVKLTDFGLC 147 (323)
T ss_pred -CeEEEEEeCCCCchHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECCCCCEEEeeCcCC
Confidence 3899999999 479888876543 2344566679999999999995 99999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh--------c
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------N 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~--------~ 248 (778)
........ ......++..|+|||++.+ ..++.++|+|||||++|||++|..||...... .
T Consensus 148 ~~~~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~ 215 (323)
T cd05584 148 KESIHEGT------VTHTFCGTIEYMAPEILMR------SGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKG 215 (323)
T ss_pred eecccCCC------cccccCCCccccChhhccC------CCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcC
Confidence 75433211 1112234568999999876 35667999999999999999999998643211 1
Q ss_pred c----CCCCcchHHHHHHHhccCCCCCC-----ChHHHHhcc
Q 004025 249 T----ASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENS 281 (778)
Q Consensus 249 ~----~~iP~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~ 281 (778)
. ..++..+.+++++||..+|.+|+ ++.++++|+
T Consensus 216 ~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~ 257 (323)
T cd05584 216 KLNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHP 257 (323)
T ss_pred CCCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCC
Confidence 1 23456678999999999999999 899999998
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.8e-32 Score=304.88 Aligned_cols=246 Identities=15% Similarity=0.229 Sum_probs=198.4
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVEN 92 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~ 92 (778)
+...+|.+...+|.|. | +|+.+..|.+++.+|||++++... .+..++..+.|-+++.... ||.++.++.+|.+.
T Consensus 365 ~~l~~F~~l~vLGkGsFG--kV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~- 441 (694)
T KOG0694|consen 365 LTLDDFRLLAVLGRGSFG--KVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTK- 441 (694)
T ss_pred ccccceEEEEEeccCcCc--eEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccC-
Confidence 3445799999999999 9 999999999999999999997642 2345778889999888885 99999999999984
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEE
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
.++|+||||+ +++..+.+..... +.....+...|+.||.||| +.+|||||||.+||+++.+|.+||
T Consensus 442 -------~~l~fvmey~~Ggdm~~~~~~~~F~----e~rarfyaAev~l~L~fLH-~~~IIYRDlKLdNiLLD~eGh~ki 509 (694)
T KOG0694|consen 442 -------EHLFFVMEYVAGGDLMHHIHTDVFS----EPRARFYAAEVVLGLQFLH-ENGIIYRDLKLDNLLLDTEGHVKI 509 (694)
T ss_pred -------CeEEEEEEecCCCcEEEEEeccccc----HHHHHHHHHHHHHHHHHHH-hcCceeeecchhheEEcccCcEEe
Confidence 4999999999 4544333322222 2234556899999999999 599999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhcc-
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT- 249 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~~- 249 (778)
+|||+|+.....+ .....+++++.|+|||++.+ ..|+.++|+|+||+|||||+.|..||..++-..+
T Consensus 510 ADFGlcKe~m~~g------~~TsTfCGTpey~aPEil~e------~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~F 577 (694)
T KOG0694|consen 510 ADFGLCKEGMGQG------DRTSTFCGTPEFLAPEVLTE------QSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVF 577 (694)
T ss_pred cccccccccCCCC------CccccccCChhhcChhhhcc------CcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Confidence 9999998765322 13455678889999999998 5899999999999999999999999975432221
Q ss_pred -----------CCCCcchHHHHHHHhccCCCCCCCh-----HHHHhcccCCccccccccchhh
Q 004025 250 -----------ASIPKSLLPDYQRLLSSMPSRRLNS-----SKLIENSVGDFWMTEYFQNKLV 296 (778)
Q Consensus 250 -----------~~iP~~L~~~i~~lL~~dP~~Rps~-----~~lL~~~~~~~w~~~ff~n~lv 296 (778)
.-++.+...++++||..||++|+.. .++.+|| ||++.-.
T Consensus 578 dsI~~d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hp--------FFr~i~w 632 (694)
T KOG0694|consen 578 DSIVNDEVRYPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHP--------FFRSIDW 632 (694)
T ss_pred HHHhcCCCCCCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCC--------ccccCCH
Confidence 2345667788999999999999975 6777786 8876443
|
|
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.5e-32 Score=294.26 Aligned_cols=230 Identities=17% Similarity=0.220 Sum_probs=182.1
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecccccCCcccEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~g~~~~~~l 102 (778)
.||.|+ | +||+|+++.+++.|+||++.+... .+...+.+.+|..+++.+ +||||++++++++.. ..+
T Consensus 2 ~lg~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~--------~~~ 71 (320)
T cd05590 2 VLGKGSFG--KVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTP--------DRL 71 (320)
T ss_pred eeeeCCCe--EEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcC--------CEE
Confidence 577787 7 999999999999999999975421 223455677888888876 699999999999864 489
Q ss_pred EEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccC
Q 004025 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (778)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~ 180 (778)
||||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++....
T Consensus 72 ~iv~Ey~~~g~L~~~i~~~~~---l~~~~~~~~~~ql~~~L~~lH~-~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~ 147 (320)
T cd05590 72 FFVMEFVNGGDLMFHIQKSRR---FDEARARFYAAEITSALMFLHD-KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI 147 (320)
T ss_pred EEEEcCCCCchHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeEeCCCCHHHeEECCCCcEEEeeCCCCeecC
Confidence 9999999 478888876543 2344466679999999999995 999999999999999999999999999987643
Q ss_pred CCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc------------
Q 004025 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------------ 248 (778)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~------------ 248 (778)
.... ......++..|+|||++.+ ..++.++|+|||||++|||++|..||.......
T Consensus 148 ~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~ 215 (320)
T cd05590 148 FNGK------TTSTFCGTPDYIAPEILQE------MLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVY 215 (320)
T ss_pred cCCC------cccccccCccccCHHHHcC------CCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCC
Confidence 2111 1112245568999999876 356778999999999999999999986432111
Q ss_pred cCCCCcchHHHHHHHhccCCCCCCCh------HHHHhcc
Q 004025 249 TASIPKSLLPDYQRLLSSMPSRRLNS------SKLIENS 281 (778)
Q Consensus 249 ~~~iP~~L~~~i~~lL~~dP~~Rps~------~~lL~~~ 281 (778)
...++..+.+++++||..||.+|+++ .++++|+
T Consensus 216 ~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~ 254 (320)
T cd05590 216 PTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHP 254 (320)
T ss_pred CCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCC
Confidence 12356678899999999999999998 8899997
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.3e-32 Score=294.81 Aligned_cols=247 Identities=18% Similarity=0.258 Sum_probs=199.2
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEeccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENI 93 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~ 93 (778)
+.+-.|++.++||+|+ + .||++.. .+.+.|++|.+.....++..+.-+++|+..|.+|+ |-+|++++|+-..+
T Consensus 358 Vkg~~Yeilk~iG~GGSS--kV~kV~~-s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d-- 432 (677)
T KOG0596|consen 358 VKGREYEILKQIGSGGSS--KVFKVLN-SDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTD-- 432 (677)
T ss_pred ECcchhhHHHhhcCCCcc--eeeeeec-CCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccC--
Confidence 4566799999999997 5 8999985 46788888888776677778889999999999997 99999999987764
Q ss_pred ccCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 94 DATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
.++||||||- .+|..+|+.+..... .-+++.+.+|++.|++++|. .+|||.||||.|+++ -.|.+||+|
T Consensus 433 ------~~lYmvmE~Gd~DL~kiL~k~~~~~~--~~~lk~ywkqML~aV~~IH~-~gIVHSDLKPANFLl-VkG~LKLID 502 (677)
T KOG0596|consen 433 ------GYLYMVMECGDIDLNKILKKKKSIDP--DWFLKFYWKQMLLAVKTIHQ-HGIVHSDLKPANFLL-VKGRLKLID 502 (677)
T ss_pred ------ceEEEEeecccccHHHHHHhccCCCc--hHHHHHHHHHHHHHHHHHHH-hceeecCCCcccEEE-EeeeEEeee
Confidence 3999999988 589999998764322 22577779999999999994 999999999999988 568999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccc-----cCCCCCcchhHHHHHHHHHHHhCCCCCChhh--
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAV-----RKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-- 245 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~-----~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-- 245 (778)
||++..+..+ ...+.....+++..||+||.+...-... +-....++|||||||+||+|+.|++||..-.
T Consensus 503 FGIA~aI~~D----TTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~ 578 (677)
T KOG0596|consen 503 FGIANAIQPD----TTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQ 578 (677)
T ss_pred echhcccCcc----ccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHH
Confidence 9999988764 2355566678888999999986421111 1124568999999999999999999986432
Q ss_pred ---hhc---------cCCCCc--chHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 246 ---LRN---------TASIPK--SLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 246 ---l~~---------~~~iP~--~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+.. ...+|. .+..+++.||..||++|+++.++|+|+
T Consensus 579 ~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhp 628 (677)
T KOG0596|consen 579 IAKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHP 628 (677)
T ss_pred HHHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCc
Confidence 111 123333 388999999999999999999999998
|
|
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.5e-32 Score=283.91 Aligned_cols=236 Identities=22% Similarity=0.333 Sum_probs=190.7
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~ 99 (778)
|++++.||.|+ | +||+++++.+++.|++|++..............+|++.++.++||||+++++.+..+
T Consensus 1 y~~~~~lg~G~~g--~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-------- 70 (260)
T PF00069_consen 1 YRLVKKLGSGGFG--TVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDD-------- 70 (260)
T ss_dssp EEEEEEEEEESSE--EEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEES--------
T ss_pred CEEeEEEEeCCCE--EEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccc--------
Confidence 88999999998 8 999999999999999999998755544444456699999999999999999999874
Q ss_pred cEEEEEecCC-c-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 100 ITIYIVTEPV-M-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 100 ~~lyIVtE~v-~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
..+|+|||++ + +|.+++..... .....+..++.||+.||.+||+ .+++|+||||+||+++.+|.++|+|||++.
T Consensus 71 ~~~~~v~~~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~L~~Lh~-~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~ 146 (260)
T PF00069_consen 71 NYLYIVMEYCPGGSLQDYLQKNKP---LSEEEILKIAYQILEALAYLHS-KGIVHRDIKPENILLDENGEVKLIDFGSSV 146 (260)
T ss_dssp SEEEEEEEEETTEBHHHHHHHHSS---BBHHHHHHHHHHHHHHHHHHHH-TTEEESSBSGGGEEESTTSEEEESSGTTTE
T ss_pred cccccccccccccccccccccccc---cccccccccccccccccccccc-cccccccccccccccccccccccccccccc
Confidence 3899999999 3 79999984332 2344566779999999999996 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh----hhhc-----
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----ELRN----- 248 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~----~l~~----- 248 (778)
....... ......+...|+|||+...+ ...+.++|+||||+++|+|++|..|+... ....
T Consensus 147 ~~~~~~~------~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~ 215 (260)
T PF00069_consen 147 KLSENNE------NFNPFVGTPEYMAPEVLQQG-----KKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKIL 215 (260)
T ss_dssp ESTSTTS------EBSSSSSSGGGSCHHHHTTT-----SSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHH
T ss_pred ccccccc------cccccccccccccccccccc-----ccccccccccccccccccccccccccccccchhhhhhhhhcc
Confidence 6422110 01122344589999998721 46778999999999999999999887643 1100
Q ss_pred -------c---CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -------T---ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -------~---~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ...+..+..++++||+.+|.+||++.++++|+
T Consensus 216 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~ 258 (260)
T PF00069_consen 216 KRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHP 258 (260)
T ss_dssp HTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSG
T ss_pred cccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCC
Confidence 0 12236889999999999999999999999998
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-31 Score=292.53 Aligned_cols=236 Identities=18% Similarity=0.219 Sum_probs=186.1
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCC-CeeeEeeeeEecccccC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHP-NILAFLHSTEVENIDAT 96 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHP-nIlk~~d~~e~e~~~g~ 96 (778)
+|++.+.||.|+ | .||+|+++.+++.|+||++.+... .+...+.+..|+++++.++|+ +|+++++++...
T Consensus 1 ~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~----- 73 (324)
T cd05587 1 DFNFLMVLGKGSFG--KVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM----- 73 (324)
T ss_pred CceEEEEEeeccCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcC-----
Confidence 589999999998 8 999999999999999999986422 223455677899999999865 588888888763
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+||||||+ ++|..++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 74 ---~~~~lv~E~~~~g~L~~~~~~~~~~---~~~~~~~~~~qi~~al~~lH~-~~ivH~dlkp~Nill~~~~~~kL~Dfg 146 (324)
T cd05587 74 ---DRLYFVMEYVNGGDLMYHIQQVGKF---KEPHAVFYAAEIAIGLFFLHS-KGIIYRDLKLDNVMLDAEGHIKIADFG 146 (324)
T ss_pred ---CEEEEEEcCCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHeEEcCCCCEEEeecC
Confidence 3899999999 5798888765432 234455668999999999995 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh-------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------- 247 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------- 247 (778)
++........ ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 147 ~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~ 214 (324)
T cd05587 147 MCKENIFGGK------TTRTFCGTPDYIAPEIIAY------QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIM 214 (324)
T ss_pred cceecCCCCC------ceeeecCCccccChhhhcC------CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9875422110 0112234568999999876 35678999999999999999999998543211
Q ss_pred -c----cCCCCcchHHHHHHHhccCCCCCCCh-----HHHHhcc
Q 004025 248 -N----TASIPKSLLPDYQRLLSSMPSRRLNS-----SKLIENS 281 (778)
Q Consensus 248 -~----~~~iP~~L~~~i~~lL~~dP~~Rps~-----~~lL~~~ 281 (778)
. ...++..+.+++++||..+|.+|++. .++++|+
T Consensus 215 ~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp 258 (324)
T cd05587 215 EHNVSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHA 258 (324)
T ss_pred cCCCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCC
Confidence 1 12356667889999999999999986 7899997
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.8e-31 Score=284.13 Aligned_cols=239 Identities=17% Similarity=0.239 Sum_probs=188.3
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.+|.|. | .||+|+++.+|+.|+||.+............+.+|++.+++++||||++++++++.+
T Consensus 1 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------- 71 (284)
T cd07860 1 NFQKVEKIGEGTYG--VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE------- 71 (284)
T ss_pred CceeeeeecCCCce--EEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccC-------
Confidence 489999999987 7 999999999999999999876544444445788999999999999999999998763
Q ss_pred ccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 99 ~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
..+|+||||+ ++|..++...... ......+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++.
T Consensus 72 -~~~~~v~e~~~~~l~~~~~~~~~~-~l~~~~~~~~~~~i~~~l~~lh~-~~i~H~~l~p~nill~~~~~~~l~dfg~~~ 148 (284)
T cd07860 72 -NKLYLVFEFLHQDLKKFMDASPLS-GIPLPLIKSYLFQLLQGLAFCHS-HRVLHRDLKPQNLLINTEGAIKLADFGLAR 148 (284)
T ss_pred -CcEEEEeeccccCHHHHHHhCCCC-CCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECCCCCEEEeeccchh
Confidence 4899999999 5688877654322 22344466679999999999995 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh----------
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---------- 247 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~---------- 247 (778)
........ .........|+|||++.+. ..++.++|+|||||++|+|++|..+|......
T Consensus 149 ~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~ 217 (284)
T cd07860 149 AFGVPVRT------YTHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 217 (284)
T ss_pred hcccCccc------cccccccccccCCeEEecC-----CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHh
Confidence 65432110 0111234579999987653 23567899999999999999999887432100
Q ss_pred -------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++.+||..||.+||++.++++|+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~ 282 (284)
T cd07860 218 GTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHP 282 (284)
T ss_pred CCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCC
Confidence 0123456677899999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=99.98 E-value=9e-32 Score=293.04 Aligned_cols=231 Identities=16% Similarity=0.204 Sum_probs=182.7
Q ss_pred cCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecccccCCcccE
Q 004025 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDATSTKIT 101 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~g~~~~~~ 101 (778)
+.||.|+ | +||+|+++.+++.|+||++.+... .+.....+..|.++++.+ +||||++++++++.+ ..
T Consensus 1 ~~lG~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~--------~~ 70 (321)
T cd05591 1 KVLGKGSFG--KVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTK--------DR 70 (321)
T ss_pred CccccCCCe--EEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcC--------Ce
Confidence 3578887 8 999999999999999999986422 223445677888888866 799999999999864 38
Q ss_pred EEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccccc
Q 004025 102 IYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (778)
Q Consensus 102 lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~ 179 (778)
+||||||+ ++|..++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++...
T Consensus 71 ~~lv~E~~~~~~L~~~l~~~~~~---~~~~~~~~~~qi~~aL~~LH~-~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~ 146 (321)
T cd05591 71 LFFVMEYVNGGDLMFQIQRSRKF---DEPRSRFYAAEVTLALMFLHR-HGVIYRDLKLDNILLDAEGHCKLADFGMCKEG 146 (321)
T ss_pred EEEEEeCCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHeEECCCCCEEEeecccceec
Confidence 99999999 4788888765422 234456679999999999995 89999999999999999999999999998764
Q ss_pred CCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh----c-------
Q 004025 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----N------- 248 (778)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~----~------- 248 (778)
..... ......++..|+|||++.+ ..++.++|+|||||++|||++|..||...... .
T Consensus 147 ~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 214 (321)
T cd05591 147 ILNGV------TTTTFCGTPDYIAPEILQE------LEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVL 214 (321)
T ss_pred ccCCc------cccccccCccccCHHHHcC------CCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC
Confidence 33211 1112234568999999876 35678999999999999999999998643211 1
Q ss_pred -cCCCCcchHHHHHHHhccCCCCCC-------ChHHHHhcc
Q 004025 249 -TASIPKSLLPDYQRLLSSMPSRRL-------NSSKLIENS 281 (778)
Q Consensus 249 -~~~iP~~L~~~i~~lL~~dP~~Rp-------s~~~lL~~~ 281 (778)
...++..+.+++++||..+|.+|+ ++.++++|+
T Consensus 215 ~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp 255 (321)
T cd05591 215 YPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHP 255 (321)
T ss_pred CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCC
Confidence 123567788999999999999999 889999998
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.2e-32 Score=275.28 Aligned_cols=241 Identities=17% Similarity=0.243 Sum_probs=199.4
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc------hhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEec
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ------DGHLAAARNGVKRLRTVR-HPNILAFLHSTEVE 91 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~------~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e 91 (778)
.|+-.+.+|.|. + +|.++.++.+|..+++|+++..... ...++..+.|+.+|+++. ||+|+++.|+|+++
T Consensus 18 ~y~pkeilgrgvss--~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 18 KYEPKEILGRGVSS--VVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred hcChHHHhcccchh--hhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 577778888886 4 7899999999999999999853221 244667789999999996 99999999999985
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEE
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~K 169 (778)
. .+++|+|.+ |.|.++|.+.-... +..-..++.|+++++.|||. .+||||||||+||+++++.++|
T Consensus 96 s--------F~FlVFdl~prGELFDyLts~VtlS---EK~tR~iMrqlfegVeylHa-~~IVHRDLKpENILlddn~~i~ 163 (411)
T KOG0599|consen 96 A--------FVFLVFDLMPRGELFDYLTSKVTLS---EKETRRIMRQLFEGVEYLHA-RNIVHRDLKPENILLDDNMNIK 163 (411)
T ss_pred c--------hhhhhhhhcccchHHHHhhhheeec---HHHHHHHHHHHHHHHHHHHH-hhhhhcccChhheeeccccceE
Confidence 4 899999999 68999998754332 22234559999999999995 8999999999999999999999
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh-h---
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-E--- 245 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~-~--- 245 (778)
|.|||+++.+..... -...++++.|.|||.++..|..-..+|+..+|+|++|++||.++.|-+||-.. +
T Consensus 164 isDFGFa~~l~~Gek-------LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlM 236 (411)
T KOG0599|consen 164 ISDFGFACQLEPGEK-------LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLM 236 (411)
T ss_pred EeccceeeccCCchh-------HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHH
Confidence 999999998876321 22346677999999999888766678899999999999999999999987432 1
Q ss_pred hhc------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 246 LRN------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 246 l~~------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
++. -..+.....+++.+||..||.+|+++.+.|.|+
T Consensus 237 LR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHp 284 (411)
T KOG0599|consen 237 LRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHP 284 (411)
T ss_pred HHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcCh
Confidence 111 135677889999999999999999999999998
|
|
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.6e-31 Score=276.33 Aligned_cols=239 Identities=21% Similarity=0.255 Sum_probs=191.9
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
.|++.+.+|.|+ | .||.++++.+++.|+||.+..........+.+.+|++.+++++||||+++++.+..+
T Consensus 1 ~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 71 (257)
T cd08223 1 AYCFVRVVGKGSYG--EVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGE------- 71 (257)
T ss_pred CceEEEEecCCCCe--EEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCC-------
Confidence 499999999998 7 899999999999999999986554444566789999999999999999999988643
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
...+|+++||+ ++|.+++...... ......+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+|||++
T Consensus 72 ~~~~~lv~e~~~~~~l~~~l~~~~~~-~l~~~~~~~~~~~l~~~l~~lH~-~~i~H~di~p~nil~~~~~~~~l~df~~~ 149 (257)
T cd08223 72 DGLLYIVMGFCEGGDLYHKLKEQKGK-LLPENQVVEWFVQIAMALQYLHE-KHILHRDLKTQNVFLTRTNIIKVGDLGIA 149 (257)
T ss_pred CCEEEEEecccCCCcHHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCchhEEEecCCcEEEecccce
Confidence 23789999999 4798888764321 12344566779999999999995 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc--------
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN-------- 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~-------- 248 (778)
......... .....+...|+|||+..+ ..++.++|+|||||++|+|++|..+|.......
T Consensus 150 ~~~~~~~~~------~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~ 217 (257)
T cd08223 150 RVLENQCDM------ASTLIGTPYYMSPELFSN------KPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEG 217 (257)
T ss_pred EEecccCCc------cccccCCcCccChhHhcC------CCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc
Confidence 876432110 111233458999999876 356678999999999999999998875432111
Q ss_pred -c----CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -T----ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -~----~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ..++..+.+++.+|++.+|..||++.++++|+
T Consensus 218 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~ 255 (257)
T cd08223 218 KLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQP 255 (257)
T ss_pred CCCCCccccCHHHHHHHHHHhccCcccCCCHHHHhcCC
Confidence 1 23556788999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.5e-31 Score=283.62 Aligned_cols=232 Identities=13% Similarity=0.164 Sum_probs=182.3
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEEE
Q 004025 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104 (778)
Q Consensus 27 lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~lyI 104 (778)
||.|+ | +||.+.++.+|+.|+||++.+..... ...+.+.+|+++|+.++||||+++++.++.+ ..+|+
T Consensus 1 lg~G~~g--~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~--------~~~~l 70 (280)
T cd05608 1 LGKGGFG--EVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTK--------TDLCL 70 (280)
T ss_pred CCCCCce--eEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCC--------CeEEE
Confidence 46676 7 99999999999999999997643222 2345678899999999999999999999864 38999
Q ss_pred EecCC--cChHHHHHHhCc-CCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCC
Q 004025 105 VTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (778)
Q Consensus 105 VtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~ 181 (778)
||||+ ++|..++..... ........+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++..+..
T Consensus 71 v~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 149 (280)
T cd05608 71 VMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQ-RRIIYRDLKPENVLLDNDGNVRISDLGLAVELKD 149 (280)
T ss_pred EEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCCCEEEeeCccceecCC
Confidence 99999 578877754322 1222344456669999999999995 8999999999999999999999999999876644
Q ss_pred CCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-------h-hc-----
Q 004025 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-------L-RN----- 248 (778)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-------l-~~----- 248 (778)
.... .....++..|+|||++.+ ..++.++|+|||||++|||++|..||.... . ..
T Consensus 150 ~~~~------~~~~~g~~~y~aPE~~~~------~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 217 (280)
T cd05608 150 GQSK------TKGYAGTPGFMAPELLQG------EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDS 217 (280)
T ss_pred CCcc------ccccCCCcCccCHHHhcC------CCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccC
Confidence 2111 112234558999999876 356789999999999999999998885321 0 10
Q ss_pred ---cCCCCcchHHHHHHHhccCCCCCC-----ChHHHHhcc
Q 004025 249 ---TASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENS 281 (778)
Q Consensus 249 ---~~~iP~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~ 281 (778)
...+|..+.+++.+||+.+|.+|+ +++++++|+
T Consensus 218 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~ 258 (280)
T cd05608 218 VTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHP 258 (280)
T ss_pred CCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcCh
Confidence 124667788999999999999999 778999998
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.3e-32 Score=309.46 Aligned_cols=253 Identities=15% Similarity=0.199 Sum_probs=195.7
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEee-eeEecccc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLH-STEVENID 94 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d-~~e~e~~~ 94 (778)
...++|.+.|.+|+ + .||.++....|..||+|.+-.. ++..++.+++||.+||.|+ |||||.|+| ......++
T Consensus 36 ~~~v~V~~vLAEGGFa--~VYla~~~~~~~~~AlKrm~~~--de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~ 111 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFA--QVYLAQDVKGGKKYALKRMYVN--DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSN 111 (738)
T ss_pred CEEEEEEEEEccCCcE--EEEEEEecCCCceeeeeeeecC--CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCC
Confidence 45677888888886 6 8999999988899999998865 5567889999999999998 999999999 44333222
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCC--ccccccCCCCeEEcCCCcEEE
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCK--LVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~--ivH~dLkp~NI~v~~~g~~KL 170 (778)
+ ....++|.|||| +.|-+++..+.-.. ..+..|..+++|+++|+.+||. ++ |||||||.+||||+.+|.|||
T Consensus 112 ~--~~~EvllLmEyC~gg~Lvd~mn~Rlq~~-lte~eVLkIf~dv~~AVa~mH~-~~pPiIHRDLKiENvLls~~g~~KL 187 (738)
T KOG1989|consen 112 N--GVWEVLLLMEYCKGGSLVDFMNTRLQTR-LTEDEVLKIFYDVCEAVAAMHY-LKPPIIHRDLKIENVLLSADGNYKL 187 (738)
T ss_pred C--ceeEEEeehhhccCCcHHHHHHHHHhcc-CChHHHHHHHHHHHHHHHHHhc-CCCccchhhhhhhheEEcCCCCEEe
Confidence 1 135789999999 47999998654333 3345577889999999999996 76 999999999999999999999
Q ss_pred EecccccccCCCCCCCCC-Ccccc--ccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh-hh
Q 004025 171 HAFDVLSEFDGNNEAANG-PMLQY--AWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-EL 246 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~-~~~~~--~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~-~l 246 (778)
||||-++..........+ .+... ....+..|++||++.-. . ....+.++|||+||||||-|+....||+.. .+
T Consensus 188 CDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDly-s--g~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l 264 (738)
T KOG1989|consen 188 CDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLY-S--GLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL 264 (738)
T ss_pred CcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhh-c--CCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce
Confidence 999998765432211110 11111 11235699999997521 1 146788999999999999999999999876 44
Q ss_pred hcc---CCCC------cchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 RNT---ASIP------KSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ~~~---~~iP------~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
..+ +.|| ..+..+|+.||..||.+||++.+++...
T Consensus 265 aIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~ 308 (738)
T KOG1989|consen 265 AILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEI 308 (738)
T ss_pred eEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHH
Confidence 332 4444 4689999999999999999999988753
|
|
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-31 Score=297.79 Aligned_cols=244 Identities=14% Similarity=0.146 Sum_probs=190.5
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
+...+|++.+.||.|+ | +||.++++.+++.|++|++.+... .......+.+|+.+++.++||||+++++.++.+
T Consensus 40 ~~~~~y~i~~~lG~G~fg--~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~-- 115 (371)
T cd05622 40 MKAEDYEVVKVIGRGAFG--EVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD-- 115 (371)
T ss_pred cchhhcEEEEEEeecCCe--EEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC--
Confidence 3456899999999998 8 899999999999999999975322 123345678899999999999999999999863
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
.++|+||||| ++|..+++.... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+
T Consensus 116 ------~~~~lv~Ey~~gg~L~~~~~~~~~----~~~~~~~~~~qi~~aL~~LH~-~~ivHrDLkp~NIll~~~~~ikL~ 184 (371)
T cd05622 116 ------RYLYMVMEYMPGGDLVNLMSNYDV----PEKWARFYTAEVVLALDAIHS-MGFIHRDVKPDNMLLDKSGHLKLA 184 (371)
T ss_pred ------CEEEEEEcCCCCCcHHHHHHhcCC----CHHHHHHHHHHHHHHHHHHHH-CCEEeCCCCHHHEEECCCCCEEEE
Confidence 4899999999 579998876542 234456678999999999995 999999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----h
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R 247 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~ 247 (778)
|||++..+..... .......++..|+|||++.+.-. ...++.++|+|||||++|||++|..||..... .
T Consensus 185 DfG~a~~~~~~~~-----~~~~~~~gt~~y~aPE~l~~~~~--~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~ 257 (371)
T cd05622 185 DFGTCMKMNKEGM-----VRCDTAVGTPDYISPEVLKSQGG--DGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS 257 (371)
T ss_pred eCCceeEcCcCCc-----ccccCcccCccccCHHHHhccCC--CccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHH
Confidence 9999987654211 11112345668999999865210 12367899999999999999999999864321 1
Q ss_pred c------------cCCCCcchHHHHHHHhccCCCC--CCChHHHHhcc
Q 004025 248 N------------TASIPKSLLPDYQRLLSSMPSR--RLNSSKLIENS 281 (778)
Q Consensus 248 ~------------~~~iP~~L~~~i~~lL~~dP~~--Rps~~~lL~~~ 281 (778)
. ...++..+..++.+||..++.+ |+++.++++|+
T Consensus 258 ~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 258 KIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred HHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 1 0235566788899999844443 78999999997
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-31 Score=284.59 Aligned_cols=241 Identities=18% Similarity=0.265 Sum_probs=191.4
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.||.|. | .||+|+++.+++.|+||.+......+.....+.+|+.++++++||||+++++++....
T Consensus 5 ~~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~----- 77 (293)
T cd07843 5 DEYEKLNRIEEGTYG--VVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSN----- 77 (293)
T ss_pred hhhhhhhhhcCCCCe--EEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecC-----
Confidence 3699999999998 7 8999999999999999999865444444456778999999999999999999987643
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
...+||||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++|+||+|+||+++.+|.+||+|||++
T Consensus 78 -~~~~~lv~e~~~~~L~~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~-~~i~H~dl~p~nili~~~~~~~l~d~g~~ 153 (293)
T cd07843 78 -LDKIYMVMEYVEHDLKSLMETMKQ--PFLQSEVKCLMLQLLSGVAHLHD-NWILHRDLKTSNLLLNNRGILKICDFGLA 153 (293)
T ss_pred -CCcEEEEehhcCcCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHH-CCeeeccCCHHHEEECCCCcEEEeecCce
Confidence 24899999999 568887766432 23345567779999999999995 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----------
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---------- 246 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l---------- 246 (778)
......... ......+..|+|||.+.+. ...+.++|+|||||++|+|++|.++|.....
T Consensus 154 ~~~~~~~~~------~~~~~~~~~~~aPE~~~~~-----~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~ 222 (293)
T cd07843 154 REYGSPLKP------YTQLVVTLWYRAPELLLGA-----KEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKL 222 (293)
T ss_pred eeccCCccc------cccccccccccCchhhcCC-----ccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence 877543110 1112334579999988653 2356789999999999999999987742110
Q ss_pred --------------------------------hccCC--CCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 --------------------------------RNTAS--IPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 --------------------------------~~~~~--iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
..... +++.+.+++++||+.+|.+||++.++++|+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~ 291 (293)
T cd07843 223 LGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHP 291 (293)
T ss_pred hCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCC
Confidence 00011 366688899999999999999999999997
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-31 Score=293.06 Aligned_cols=230 Identities=16% Similarity=0.197 Sum_probs=181.5
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecccccCCcccEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~g~~~~~~l 102 (778)
.||.|+ | +||.|+++.+++.|+||++.+.... ......+.+|..+++.+ +||||++++++++++ ..+
T Consensus 2 ~lG~G~~g--~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~--------~~~ 71 (329)
T cd05588 2 VIGRGSYA--KVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTE--------SRL 71 (329)
T ss_pred eEeeCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcC--------CEE
Confidence 467787 7 9999999999999999999864322 23456688899999998 699999999999874 489
Q ss_pred EEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccC
Q 004025 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (778)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~ 180 (778)
||||||| ++|..++...+. .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++....
T Consensus 72 ~lv~e~~~~g~L~~~~~~~~~---l~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~ 147 (329)
T cd05588 72 FFVIEFVSGGDLMFHMQRQRK---LPEEHARFYSAEISLALNFLHE-RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGI 147 (329)
T ss_pred EEEEeCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHeEECCCCCEEECcCccccccc
Confidence 9999999 478888765432 2344456679999999999995 999999999999999999999999999987532
Q ss_pred CCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh---------------
Q 004025 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE--------------- 245 (778)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~--------------- 245 (778)
.... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||....
T Consensus 148 ~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~ 215 (329)
T cd05588 148 RPGD------TTSTFCGTPNYIAPEILRG------EDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQ 215 (329)
T ss_pred cCCC------ccccccCCccccCHHHHcC------CCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHH
Confidence 2111 0112345568999999876 356789999999999999999999885210
Q ss_pred --hhcc----CCCCcchHHHHHHHhccCCCCCCC------hHHHHhcc
Q 004025 246 --LRNT----ASIPKSLLPDYQRLLSSMPSRRLN------SSKLIENS 281 (778)
Q Consensus 246 --l~~~----~~iP~~L~~~i~~lL~~dP~~Rps------~~~lL~~~ 281 (778)
.... ..++..+.+++++||+.||.+|++ +.++++|+
T Consensus 216 ~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp 263 (329)
T cd05588 216 VILEKQIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHP 263 (329)
T ss_pred HHHcCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCC
Confidence 0111 234456778999999999999997 68999998
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-32 Score=295.47 Aligned_cols=231 Identities=15% Similarity=0.226 Sum_probs=181.8
Q ss_pred cCCCCCC-CceEEEEeEE---CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCccc
Q 004025 25 DPYPSAW-GSWSHFQGTS---KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKI 100 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~---k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~ 100 (778)
+.||.|+ | +||.+++ +.+|+.|+||++.+..........+.+|+++|++++||||+++++.++.+ .
T Consensus 2 ~~lg~G~~g--~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--------~ 71 (318)
T cd05582 2 KVLGQGSFG--KVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTE--------G 71 (318)
T ss_pred ceeeeCCCE--EEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcC--------C
Confidence 4678887 7 7887765 46789999999986433333345677899999999999999999999864 3
Q ss_pred EEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccc
Q 004025 101 TIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (778)
Q Consensus 101 ~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~ 178 (778)
.+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++..
T Consensus 72 ~~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 147 (318)
T cd05582 72 KLYLILDFLRGGDLFTRLSKEVM---FTEEDVKFYLAELALALDHLHS-LGIIYRDLKPENILLDEEGHIKLTDFGLSKE 147 (318)
T ss_pred EEEEEEcCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCEecCCCCHHHeEECCCCcEEEeeccCCcc
Confidence 899999999 578888865432 2344566679999999999995 9999999999999999999999999999876
Q ss_pred cCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----h----cc-
Q 004025 179 FDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R----NT- 249 (778)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~----~~- 249 (778)
...... ......++..|+|||++.+ ..++.++|+|||||++|||++|..||..... . ..
T Consensus 148 ~~~~~~------~~~~~~g~~~y~aPE~~~~------~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~ 215 (318)
T cd05582 148 SIDHEK------KAYSFCGTVEYMAPEVVNR------RGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKL 215 (318)
T ss_pred cCCCCC------ceecccCChhhcCHHHHcC------CCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCC
Confidence 543211 1122244568999999876 3567899999999999999999998864321 1 11
Q ss_pred ---CCCCcchHHHHHHHhccCCCCCCC-----hHHHHhcc
Q 004025 250 ---ASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENS 281 (778)
Q Consensus 250 ---~~iP~~L~~~i~~lL~~dP~~Rps-----~~~lL~~~ 281 (778)
..++..+.+++++||+.||.+|++ +.++++|+
T Consensus 216 ~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~ 255 (318)
T cd05582 216 GMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHP 255 (318)
T ss_pred CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCC
Confidence 235667888999999999999999 67788887
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-31 Score=282.88 Aligned_cols=239 Identities=17% Similarity=0.258 Sum_probs=187.3
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
-..|++.+.+|.|. | +||+|+++.+++.|+||.+....... ....+.+|+++++.++||||++++++++++
T Consensus 4 ~~~y~~~~~lg~g~~~--~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----- 75 (291)
T cd07844 4 LETYKKLDKLGEGSYA--TVYKGRSKLTGQLVALKEIRLEHEEG-APFTAIREASLLKDLKHANIVTLHDIIHTK----- 75 (291)
T ss_pred ccceeEEEEEeecCCe--EEEEEEEcCCCcEEEEEEEecccccC-CchhHHHHHHHHhhCCCcceeeEEEEEecC-----
Confidence 35799999999998 8 89999999999999999997643222 223466899999999999999999999863
Q ss_pred CcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 97 ~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
.+.|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||+
T Consensus 76 ---~~~~lv~e~~~~~L~~~~~~~~~--~~~~~~~~~~~~ql~~al~~lH~-~~i~H~dl~p~nil~~~~~~~kl~dfg~ 149 (291)
T cd07844 76 ---KTLTLVFEYLDTDLKQYMDDCGG--GLSMHNVRLFLFQLLRGLAYCHQ-RRVLHRDLKPQNLLISERGELKLADFGL 149 (291)
T ss_pred ---CeEEEEEecCCCCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHh-CCeecccCCHHHEEEcCCCCEEECcccc
Confidence 4899999999 578888876432 22344567779999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-----hh---
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-----LR--- 247 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-----l~--- 247 (778)
+.......... .....+..|+|||++.+. ..++.++|+|||||++|+|++|..+|.... +.
T Consensus 150 ~~~~~~~~~~~------~~~~~~~~~~aPE~~~~~-----~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~ 218 (291)
T cd07844 150 ARAKSVPSKTY------SNEVVTLWYRPPDVLLGS-----TEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIF 218 (291)
T ss_pred ccccCCCCccc------cccccccccCCcHHhhcC-----cccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHH
Confidence 87653221100 111234579999987653 245678999999999999999998874321 00
Q ss_pred -----------------------------------ccCCCC--cchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -----------------------------------NTASIP--KSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -----------------------------------~~~~iP--~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+. ..+.+++.+||+.+|.+||++.++++|+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~ 289 (291)
T cd07844 219 RVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHP 289 (291)
T ss_pred HhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCC
Confidence 001222 5567889999999999999999999997
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-31 Score=276.75 Aligned_cols=243 Identities=16% Similarity=0.226 Sum_probs=194.1
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++++.+|.|+ | +||+|..+.++..|+||++....... ....+.+|++.|+.++||||+++++.++.+
T Consensus 2 ~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 71 (267)
T cd06610 2 DYELIEVIGVGATA--VVYAAICLPNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCNHPNVVKYYTSFVVG------- 71 (267)
T ss_pred cceeeeeecCCCCe--EEEEEEEcCCCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcCCCCEEEEEEEEeeC-------
Confidence 699999999998 7 99999999999999999997654333 567789999999999999999999998764
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|+|||++ ++|.+++.............+..++.||+.||.|||+ .+++||||+|+||++++++.+||+|||++
T Consensus 72 -~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~-~~i~h~~l~p~ni~~~~~~~~~l~df~~~ 149 (267)
T cd06610 72 -DELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHS-NGQIHRDIKAGNILLGEDGSVKIADFGVS 149 (267)
T ss_pred -CEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHhEEEcCCCCEEEcccchH
Confidence 4899999999 4799998765332223344566679999999999995 99999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh--------c
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------N 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~--------~ 248 (778)
..+........ .......+...|++||++... ..++.++|+|||||++|+|++|..||...... .
T Consensus 150 ~~~~~~~~~~~--~~~~~~~~~~~y~~Pe~~~~~-----~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~ 222 (267)
T cd06610 150 ASLADGGDRTR--KVRKTFVGTPCWMAPEVMEQV-----HGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQN 222 (267)
T ss_pred HHhccCccccc--cccccccCChhhcChHHHccc-----cCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcC
Confidence 87765322110 011122344589999998753 35678999999999999999999887532110 0
Q ss_pred ----------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ----------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++.+||..||..||++.++++|+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p 265 (267)
T cd06610 223 DPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHK 265 (267)
T ss_pred CCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCC
Confidence 024566788999999999999999999999998
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-31 Score=306.22 Aligned_cols=241 Identities=16% Similarity=0.226 Sum_probs=183.3
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCC------CCeeeEeeeeEe
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRH------PNILAFLHSTEV 90 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrH------PnIlk~~d~~e~ 90 (778)
..+|++.+.||.|+ | +||+|+++.+++.||||++.... .....++.|+.+++.++| ++|+++++++..
T Consensus 128 ~~~y~i~~~lG~G~fg--~V~~a~~~~~~~~vAvK~i~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 128 TQRFKILSLLGEGTFG--KVVEAWDRKRKEYCAVKIVRNVP---KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred CCcEEEEEEEEeccCE--EEEEEEEcCCCeEEEEEEEecch---hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 35799999999998 8 99999999999999999996421 223345667777777655 458899998875
Q ss_pred cccccCCcccEEEEEecCCc-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC---
Q 004025 91 ENIDATSTKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL--- 166 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g--- 166 (778)
+ ..++|||||+++ .|.+++...+. .....+..++.||+.||.|||.+++||||||||+||+++.+|
T Consensus 203 ~-------~~~~~iv~~~~g~~l~~~l~~~~~---l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~ 272 (467)
T PTZ00284 203 E-------TGHMCIVMPKYGPCLLDWIMKHGP---FSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVV 272 (467)
T ss_pred C-------CceEEEEEeccCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCccc
Confidence 4 248999999995 58888876532 233446667999999999999646999999999999998766
Q ss_pred -------------cEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHH
Q 004025 167 -------------DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYE 233 (778)
Q Consensus 167 -------------~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liye 233 (778)
.+||+|||.+...... .....++..|+|||++.+ ..++.++|+|||||++||
T Consensus 273 ~~~~~~~~~~~~~~vkl~DfG~~~~~~~~---------~~~~~gt~~Y~APE~~~~------~~~~~~~DiwSlGvil~e 337 (467)
T PTZ00284 273 DPVTNRALPPDPCRVRICDLGGCCDERHS---------RTAIVSTRHYRSPEVVLG------LGWMYSTDMWSMGCIIYE 337 (467)
T ss_pred ccccccccCCCCceEEECCCCccccCccc---------cccccCCccccCcHHhhc------CCCCcHHHHHHHHHHHHH
Confidence 4999999987543221 112245568999999876 357789999999999999
Q ss_pred HHhCCCCCChhhh----h----ccCCCC----------------------------------------------cchHHH
Q 004025 234 LFSGMRLSKTEEL----R----NTASIP----------------------------------------------KSLLPD 259 (778)
Q Consensus 234 l~tg~~p~~~~~l----~----~~~~iP----------------------------------------------~~L~~~ 259 (778)
|++|++||..... . ....+| ..+.++
T Consensus 338 lltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl 417 (467)
T PTZ00284 338 LYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDL 417 (467)
T ss_pred HHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHH
Confidence 9999999853210 0 001111 124578
Q ss_pred HHHHhccCCCCCCChHHHHhcccCCcccccccc
Q 004025 260 YQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQ 292 (778)
Q Consensus 260 i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff~ 292 (778)
+.+||..||++|+++.++|+|+ |+..||.
T Consensus 418 i~~mL~~dP~~R~ta~e~L~Hp----~~~~~~~ 446 (467)
T PTZ00284 418 IYGLLHYDRQKRLNARQMTTHP----YVLKYYP 446 (467)
T ss_pred HHHhCCcChhhCCCHHHHhcCc----cccccCC
Confidence 9999999999999999999999 6665554
|
|
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.5e-32 Score=290.37 Aligned_cols=242 Identities=19% Similarity=0.255 Sum_probs=198.4
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
=|++.+.||.|- . +|-.+++--+|+.||||++++...++.....+..|++.||.++||||+++|+++.+
T Consensus 19 LYDLekTlG~GHFA--VVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDT-------- 88 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFA--VVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDT-------- 88 (864)
T ss_pred eehhhhhhcCCcee--hhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcc--------
Confidence 399999999986 5 78889999999999999999987777666778899999999999999999999987
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeE-EcCCCcEEEEeccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVV-VTQTLDWKLHAFDV 175 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~-v~~~g~~KL~dFgl 175 (778)
+..+|+|.|.- ++|++||-+.... ..++.-+.++.||+.|+.|+|+ ..+|||||||+||+ +..-|-+||.|||+
T Consensus 89 QTKlyLiLELGD~GDl~DyImKHe~G--l~E~La~kYF~QI~~AI~YCHq-LHVVHRDLKPENVVFFEKlGlVKLTDFGF 165 (864)
T KOG4717|consen 89 QTKLYLILELGDGGDLFDYIMKHEEG--LNEDLAKKYFAQIVHAISYCHQ-LHVVHRDLKPENVVFFEKLGLVKLTDFGF 165 (864)
T ss_pred cceEEEEEEecCCchHHHHHHhhhcc--ccHHHHHHHHHHHHHHHHHHhh-hhhhcccCCcceeEEeeecCceEeeeccc
Confidence 45999999997 6899999765421 2344455669999999999995 99999999999985 56789999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh----hhhc---
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----ELRN--- 248 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~----~l~~--- 248 (778)
+..+..... -..+++...|.|||++.++ .+...++||||||+++|.|.+|++||+.. .+..
T Consensus 166 SNkf~PG~k-------L~TsCGSLAYSAPEILLGD-----sYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImD 233 (864)
T KOG4717|consen 166 SNKFQPGKK-------LTTSCGSLAYSAPEILLGD-----SYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMD 233 (864)
T ss_pred cccCCCcch-------hhcccchhhccCchhhhcC-----ccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhc
Confidence 887765321 1223556699999999986 45567999999999999999999999632 2221
Q ss_pred -cCCCC----cchHHHHHHHhccCCCCCCChHHHHhcccCCcccccc
Q 004025 249 -TASIP----KSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEY 290 (778)
Q Consensus 249 -~~~iP----~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~f 290 (778)
-+.+| +..++++.+||..+|++|.+.+++..++ |++.-
T Consensus 234 CKYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~----Wlq~~ 276 (864)
T KOG4717|consen 234 CKYTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTS----WLQAG 276 (864)
T ss_pred ccccCchhhhHHHHHHHHHHHhcCchhhccHHHHhccc----cccCC
Confidence 14455 4567889999999999999999999998 87643
|
|
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-31 Score=282.88 Aligned_cols=243 Identities=17% Similarity=0.186 Sum_probs=191.9
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.+|.|+ | +||+++++.+|..|++|.+.... .+.....+.+|+..+++++||||+++++.+..+
T Consensus 2 ~~~~~~~ig~g~~g--~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------- 71 (286)
T cd06622 2 EIEVLDELGKGNYG--SVYKVLHRPTGVTMAMKEIRLEL-DESKFNQIIMELDILHKAVSPYIVDFYGAFFIE------- 71 (286)
T ss_pred hhhhhhhhcccCCe--EEEEEEEcCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecC-------
Confidence 589999999998 8 99999999999999999987542 333456788999999999999999999999874
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|+||||+ ++|..++.............+.+++.||+.||.|||+.++++|+||+|+||+++.++.+||+|||++
T Consensus 72 -~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 150 (286)
T cd06622 72 -GAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVS 150 (286)
T ss_pred -CeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCc
Confidence 3899999999 4688888764222223455677889999999999996579999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-------hc-
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------RN- 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l-------~~- 248 (778)
..+..... ....+...|++||++.+.-......++.++|+|||||++|+|++|..||..... ..
T Consensus 151 ~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 222 (286)
T cd06622 151 GNLVASLA--------KTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAI 222 (286)
T ss_pred ccccCCcc--------ccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHH
Confidence 76643210 111234479999998653222223457789999999999999999988753211 10
Q ss_pred --------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 --------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 --------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+..++.+||..+|..||++.++++|+
T Consensus 223 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~ 263 (286)
T cd06622 223 VDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHP 263 (286)
T ss_pred hhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcCh
Confidence 123456678889999999999999999999998
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-31 Score=292.58 Aligned_cols=230 Identities=14% Similarity=0.191 Sum_probs=180.3
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecccccCCcccEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~g~~~~~~l 102 (778)
.||.|+ | +||+|+++.+++.|+||++.+.... ......+.+|+.++..+ +||||++++++++.+ ..+
T Consensus 2 ~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~--------~~~ 71 (329)
T cd05618 2 VIGRGSYA--KVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE--------SRL 71 (329)
T ss_pred eeeeCCCe--EEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeC--------CEE
Confidence 578887 7 9999999999999999999865322 23456678899888776 799999999999874 389
Q ss_pred EEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccC
Q 004025 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (778)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~ 180 (778)
||||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++....
T Consensus 72 ~lv~E~~~~~~L~~~~~~~~~---l~~~~~~~i~~qi~~~l~~lH~-~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~ 147 (329)
T cd05618 72 FFVIEYVNGGDLMFHMQRQRK---LPEEHARFYSAEISLALNYLHE-RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 147 (329)
T ss_pred EEEEeCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeeeCCCCHHHEEECCCCCEEEeeCCcccccc
Confidence 9999999 578887765432 2344566679999999999995 899999999999999999999999999987543
Q ss_pred CCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh------------h---
Q 004025 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE------------E--- 245 (778)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~------------~--- 245 (778)
..... .....++..|+|||++.+ ..++.++|+|||||++|||++|..||... .
T Consensus 148 ~~~~~------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~ 215 (329)
T cd05618 148 RPGDT------TSTFCGTPNYIAPEILRG------EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ 215 (329)
T ss_pred CCCCc------cccccCCccccCHHHHcC------CCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHH
Confidence 21110 112244568999999876 35677999999999999999999888410 0
Q ss_pred --hhccCC----CCcchHHHHHHHhccCCCCCCC------hHHHHhcc
Q 004025 246 --LRNTAS----IPKSLLPDYQRLLSSMPSRRLN------SSKLIENS 281 (778)
Q Consensus 246 --l~~~~~----iP~~L~~~i~~lL~~dP~~Rps------~~~lL~~~ 281 (778)
+..... ++..+.+++++||+.||.+|++ +.++++|+
T Consensus 216 ~i~~~~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp 263 (329)
T cd05618 216 VILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHP 263 (329)
T ss_pred HHhcCCCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCC
Confidence 011123 3445678899999999999998 47999997
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-31 Score=284.13 Aligned_cols=238 Identities=20% Similarity=0.290 Sum_probs=188.5
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc---hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ---DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~---~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
+|++.+.||.|. | .||+|.++.+|+.|+||.+...... ......+.+|+++++.++||||+++++++..+
T Consensus 1 ~y~~~~~lg~g~~~--~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~---- 74 (298)
T cd07841 1 RYEKGKKLGEGTYA--VVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHK---- 74 (298)
T ss_pred Cceeeeeeeecccc--EEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecC----
Confidence 489999999987 7 9999999999999999999865433 23445677899999999999999999999873
Q ss_pred CCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+|+||||+ ++|..++..... ......+..++.||++||.|||+ .+++||||+|+||+++.+|.+||+|||
T Consensus 75 ----~~~~lv~e~~~~~L~~~i~~~~~--~~~~~~~~~~~~qi~~al~~lH~-~~i~H~dl~p~nill~~~~~~~l~dfg 147 (298)
T cd07841 75 ----SNINLVFEFMETDLEKVIKDKSI--VLTPADIKSYMLMTLRGLEYLHS-NWILHRDLKPNNLLIASDGVLKLADFG 147 (298)
T ss_pred ----CEEEEEEcccCCCHHHHHhccCC--CCCHHHHHHHHHHHHHHHHHHHh-CCeeecCCChhhEEEcCCCCEEEccce
Confidence 3899999999 568888876541 12344456669999999999995 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh--------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------- 246 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l-------- 246 (778)
++.......... ........|+|||.+.+. ..++.++|+|||||++|||++|.++|.....
T Consensus 148 ~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~ 216 (298)
T cd07841 148 LARSFGSPNRKM------THQVVTRWYRAPELLFGA-----RHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIF 216 (298)
T ss_pred eeeeccCCCccc------cccccceeeeCHHHHhCC-----CCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHH
Confidence 998765432111 111234479999987542 3456789999999999999999776642110
Q ss_pred h--------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 R--------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ~--------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ....++..+.+++.+||..+|.+||++.++++|+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~ 283 (298)
T cd07841 217 EALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHP 283 (298)
T ss_pred HHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCc
Confidence 0 0023455677889999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-31 Score=286.19 Aligned_cols=243 Identities=17% Similarity=0.244 Sum_probs=190.2
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|++.+.||.|. | .||+|+++.+|+.|+||++..+...+.......+|+.++++++||||+++++++..+.
T Consensus 5 ~~~~y~~~~~ig~g~~~--~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--- 79 (309)
T cd07845 5 SVTEFEKLNRIGEGTYG--IVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKH--- 79 (309)
T ss_pred cccceeEeeeeeecCCE--EEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCC---
Confidence 345799999999997 7 9999999999999999999865433333334668999999999999999999997543
Q ss_pred CCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
...+|+||||+ ++|..++..... ......+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||
T Consensus 80 ---~~~~~lv~e~~~~~l~~~l~~~~~--~l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~nil~~~~~~~kL~dfg 153 (309)
T cd07845 80 ---LDSIFLVMEYCEQDLASLLDNMPT--PFSESQVKCLMLQLLRGLQYLHE-NFIIHRDLKVSNLLLTDKGCLKIADFG 153 (309)
T ss_pred ---CCeEEEEEecCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECCCCCEEECccc
Confidence 23789999999 578887765431 12334456679999999999995 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----h---
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R--- 247 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~--- 247 (778)
++......... .........|+|||++.+. ..++.++|+|||||++|||++|.++|..... .
T Consensus 154 ~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~ 222 (309)
T cd07845 154 LARTYGLPAKP------MTPKVVTLWYRAPELLLGC-----TTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLII 222 (309)
T ss_pred eeeecCCccCC------CCcccccccccChhhhcCC-----CCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 99876542110 0111234579999998653 3467799999999999999999988742210 0
Q ss_pred c-----------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 N-----------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ~-----------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+ ...+++.+.+++++||..||.+||++.+++.|+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~ 291 (309)
T cd07845 223 QLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESS 291 (309)
T ss_pred HhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence 0 011355677899999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-31 Score=278.06 Aligned_cols=242 Identities=17% Similarity=0.262 Sum_probs=189.7
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-------hHHHHHHHHHHHHhcCCCCCeeeEeeeeEec
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-------GHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-------~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e 91 (778)
+|.++..+|.|. | .||.|.++.+++.|++|.+....... ...+.+++|+.++++++||||+++++.+..+
T Consensus 1 ~~~~~~~ig~g~~~--~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 78 (267)
T cd06628 1 KWIKGALIGSGSFG--SVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDA 78 (267)
T ss_pred CccccceeecCCCe--EEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeC
Confidence 488899999987 6 99999999999999999987643221 2346788999999999999999999998864
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEE
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~K 169 (778)
.+.|+||||+ ++|..++...... ....+..++.||+.||.|||+ .+++||||+|+||+++.++.+|
T Consensus 79 --------~~~~lv~e~~~~~~L~~~l~~~~~l---~~~~~~~~~~~l~~~l~~lH~-~~ivH~di~p~nil~~~~~~~~ 146 (267)
T cd06628 79 --------DHLNIFLEYVPGGSVAALLNNYGAF---EETLVRNFVRQILKGLNYLHN-RGIIHRDIKGANILVDNKGGIK 146 (267)
T ss_pred --------CccEEEEEecCCCCHHHHHHhccCc---cHHHHHHHHHHHHHHHHHHHh-cCcccccCCHHHEEEcCCCCEE
Confidence 3889999999 4798888765422 233455669999999999995 9999999999999999999999
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE---- 245 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~---- 245 (778)
|+|||++....................+...|+|||.+.+. .++.++|+|||||++|+|++|..||....
T Consensus 147 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~------~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~ 220 (267)
T cd06628 147 ISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQT------SYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQA 220 (267)
T ss_pred ecccCCCcccccccccCCccccccccCCCcCccChhHhccC------CCCchhhhHHHHHHHHHHhhCCCCCCCccHHHH
Confidence 99999988775322111101001112334589999998763 45678999999999999999998875321
Q ss_pred hh---c------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 246 LR---N------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 246 l~---~------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. . ...+|..+.+++++||+.+|.+||++.++++|+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 265 (267)
T cd06628 221 IFKIGENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHP 265 (267)
T ss_pred HHHHhccCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCC
Confidence 10 0 124567788999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.4e-31 Score=285.10 Aligned_cols=234 Identities=15% Similarity=0.163 Sum_probs=188.9
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.||.|+ | .||++.++.++..|++|.+.... .......+.+|+++++.++||||+++++.+..+
T Consensus 2 ~~~~~~~lg~G~~g--~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------- 71 (308)
T cd06615 2 DFEKLGELGAGNGG--VVTKVLHRPSGLIMARKLIHLEI-KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSD------- 71 (308)
T ss_pred CceEEeeccCCCCe--EEEEEEEcCCCeEEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeC-------
Confidence 599999999998 8 89999999999999999987542 233456688999999999999999999999874
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|+||||+ ++|.++++.... .....+..++.||+.||.|||+.++++||||+|+||+++.+|.+||+|||++
T Consensus 72 -~~~~lv~ey~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 147 (308)
T cd06615 72 -GEISICMEHMDGGSLDQVLKKAGR---IPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 147 (308)
T ss_pred -CEEEEEeeccCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCc
Confidence 3899999999 479999876532 2344566779999999999996568999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhcc-------
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT------- 249 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~~------- 249 (778)
....... .....+...|+|||.+.+ ..++.++|+|||||++|+|++|..||........
T Consensus 148 ~~~~~~~--------~~~~~~~~~~~aPE~~~~------~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~ 213 (308)
T cd06615 148 GQLIDSM--------ANSFVGTRSYMSPERLQG------THYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRP 213 (308)
T ss_pred ccccccc--------cccCCCCcCccChhHhcC------CCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCc
Confidence 7653321 111234558999999765 3466789999999999999999988642111000
Q ss_pred -------------------------------------------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 250 -------------------------------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 250 -------------------------------------------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
..++..+.+++.+||..+|.+||++.++++|+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 288 (308)
T cd06615 214 VSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP 288 (308)
T ss_pred cccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 01344578889999999999999999999998
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-31 Score=290.56 Aligned_cols=230 Identities=16% Similarity=0.200 Sum_probs=183.1
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecccccCCcccEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~g~~~~~~l 102 (778)
.||.|+ | +||+|+++.+++.|+||++.+... .......+.+|.++++.+ +||||++++++++.. .++
T Consensus 2 ~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~--------~~~ 71 (318)
T cd05570 2 VLGKGSFG--KVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTK--------DRL 71 (318)
T ss_pred eeeeCCCe--EEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcC--------CEE
Confidence 578887 8 899999999999999999986422 123355677888889888 699999999999863 489
Q ss_pred EEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccC
Q 004025 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (778)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~ 180 (778)
|+||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++....
T Consensus 72 ~lv~e~~~~~~L~~~~~~~~~---l~~~~~~~~~~qi~~~l~~LH~-~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 147 (318)
T cd05570 72 FFVMEYVNGGDLMFHIQRSGR---FDEPRARFYAAEIVLGLQFLHE-RGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGI 147 (318)
T ss_pred EEEEcCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeEccCCCHHHeEECCCCcEEecccCCCeecC
Confidence 9999999 578888876532 2344466679999999999995 999999999999999999999999999987532
Q ss_pred CCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc------------
Q 004025 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------------ 248 (778)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~------------ 248 (778)
.... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||.......
T Consensus 148 ~~~~------~~~~~~g~~~y~aPE~~~~------~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~ 215 (318)
T cd05570 148 LGGV------TTSTFCGTPDYIAPEILSY------QPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRY 215 (318)
T ss_pred cCCC------cccceecCccccCHHHhcC------CCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 2111 1112234568999999876 356789999999999999999999986432111
Q ss_pred cCCCCcchHHHHHHHhccCCCCCCCh-----HHHHhcc
Q 004025 249 TASIPKSLLPDYQRLLSSMPSRRLNS-----SKLIENS 281 (778)
Q Consensus 249 ~~~iP~~L~~~i~~lL~~dP~~Rps~-----~~lL~~~ 281 (778)
...++..+.+++++||..+|.+||++ .++++|+
T Consensus 216 ~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~ 253 (318)
T cd05570 216 PRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHP 253 (318)
T ss_pred CCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCC
Confidence 12466778899999999999999999 9999997
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-31 Score=281.25 Aligned_cols=237 Identities=20% Similarity=0.276 Sum_probs=187.3
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.++.|. | .||+|+++.+|+.|+||++..........+.+.+|++++++++||||+++++.++..
T Consensus 2 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~------- 72 (286)
T cd07847 2 KYEKLSKIGEGSYG--VVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRK------- 72 (286)
T ss_pred ceeeeeeecccCCe--EEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeC-------
Confidence 699999999998 7 899999999999999999876543333445678999999999999999999999863
Q ss_pred ccEEEEEecCCc-C-hHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPVM-P-LSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v~-~-L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|+||||+. . |..++.... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 73 -~~~~~v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~ql~~~l~~LH~-~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 147 (286)
T cd07847 73 -RKLHLVFEYCDHTVLNELEKNPR---GVPEHLIKKIIWQTLQAVNFCHK-HNCIHRDVKPENILITKQGQIKLCDFGFA 147 (286)
T ss_pred -CEEEEEEeccCccHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHH-CCceecCCChhhEEEcCCCcEEECccccc
Confidence 48999999993 3 444443322 12344566779999999999996 99999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----h-----
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R----- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~----- 247 (778)
......... .........|++||++.+. ..++.++|+|||||++|+|++|.+||..... .
T Consensus 148 ~~~~~~~~~------~~~~~~~~~~~aPE~~~~~-----~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~ 216 (286)
T cd07847 148 RILTGPGDD------YTDYVATRWYRAPELLVGD-----TQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKT 216 (286)
T ss_pred eecCCCccc------ccCcccccccCCHHHHhCC-----CCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence 877543210 1112334579999997653 3456789999999999999999988753210 0
Q ss_pred ----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ----------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++.+||..+|.+||++.+++.|+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~ 284 (286)
T cd07847 217 LGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHP 284 (286)
T ss_pred hCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCC
Confidence 0123566688999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-31 Score=290.44 Aligned_cols=252 Identities=19% Similarity=0.303 Sum_probs=194.3
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.||.|+ | .||.|+++.+|+.|+||++..... ......+.+|+.+++.++||||+++++++......+
T Consensus 5 ~~y~i~~~lg~G~~g--~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~-- 79 (336)
T cd07849 5 PRYQNLSYIGEGAYG--MVCSATHKPTGVKVAIKKISPFEH-QTFCQRTLREIKILRRFKHENIIGILDIIRPPSFES-- 79 (336)
T ss_pred cceEEEEEEEecCCe--EEEEEEEcCCCCeEEEEEeccccc-chhHHHHHHHHHHHHhCCCCCcCchhheeecccccc--
Confidence 4799999999998 8 899999999999999999864322 234556778999999999999999999876533111
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
...+|+|+||+ ++|.+++.... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 80 -~~~~~lv~e~~~~~l~~~~~~~~----l~~~~~~~i~~ql~~aL~~LH~-~~ivH~dlkp~Nill~~~~~~kl~dfg~~ 153 (336)
T cd07849 80 -FNDVYIVQELMETDLYKLIKTQH----LSNDHIQYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTNCDLKICDFGLA 153 (336)
T ss_pred -cceEEEEehhcccCHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHEEECCCCCEEECcccce
Confidence 24789999999 56777776543 2344567779999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----------
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---------- 246 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l---------- 246 (778)
........... ......++..|+|||.+.+. ..++.++|+|||||++|+|++|.++|.....
T Consensus 154 ~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~-----~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~ 225 (336)
T cd07849 154 RIADPEHDHTG---FLTEYVATRWYRAPEIMLNS-----KGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGV 225 (336)
T ss_pred eeccccccccC---CcCCcCcCCCccChHHhhCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 76644221110 11122345689999987542 3467789999999999999999988743210
Q ss_pred ---------h------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcccCCccccccccc
Q 004025 247 ---------R------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQN 293 (778)
Q Consensus 247 ---------~------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff~n 293 (778)
. ....++..+.+++.+||+.+|.+||++.++++|+ |+..++..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp----~~~~~~~~ 301 (336)
T cd07849 226 LGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHP----YLEQYHDP 301 (336)
T ss_pred cCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCc----cccccCCC
Confidence 0 0123456688899999999999999999999998 66666543
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-31 Score=282.95 Aligned_cols=237 Identities=16% Similarity=0.197 Sum_probs=189.3
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.|++.+.||.|+ | +||++.+..+++.|+||++....... .....+.+|+.+++.++||||+++++.++..
T Consensus 1 ~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------ 72 (285)
T cd05605 1 TFRHYRVLGKGGFG--EVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETK------ 72 (285)
T ss_pred CceEEEEEecCCCe--EEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCC------
Confidence 488999999998 8 99999999999999999997643222 2344577899999999999999999999863
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+|+||||+ ++|..++...... ......+..++.||+.||.|||+ .+++||||||+||++++++.++|+|||+
T Consensus 73 --~~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nil~~~~~~~~l~Dfg~ 148 (285)
T cd05605 73 --DALCLVLTLMNGGDLKFHIYNMGNP-GFDEERAVFYAAEITCGLEDLHR-ERIVYRDLKPENILLDDYGHIRISDLGL 148 (285)
T ss_pred --CeEEEEEeccCCCcHHHHHHhcCcC-CCCHHHHHHHHHHHHHHHHHHHH-CCcEecCCCHHHEEECCCCCEEEeeCCC
Confidence 4899999999 4788777654321 12344566679999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-------h-
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------R- 247 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l-------~- 247 (778)
+........ .....++..|+|||++.+ ..++.++|+|||||++|||++|..||..... .
T Consensus 149 ~~~~~~~~~-------~~~~~~~~~y~aPE~~~~------~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~ 215 (285)
T cd05605 149 AVEIPEGET-------IRGRVGTVGYMAPEVVKN------ERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVER 215 (285)
T ss_pred ceecCCCCc-------cccccCCCCccCcHHhcC------CCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHH
Confidence 876543211 011234568999999875 3567789999999999999999999864211 0
Q ss_pred ---c-----cCCCCcchHHHHHHHhccCCCCCC-----ChHHHHhcc
Q 004025 248 ---N-----TASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENS 281 (778)
Q Consensus 248 ---~-----~~~iP~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~ 281 (778)
. ...++..+.+++.+||..||.+|+ ++.++++|+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~ 262 (285)
T cd05605 216 RVKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHP 262 (285)
T ss_pred HhhhcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCc
Confidence 0 124667788999999999999999 899999997
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.1e-31 Score=276.99 Aligned_cols=240 Identities=15% Similarity=0.181 Sum_probs=189.9
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|++.+.+|.|. | .||+|+++.+++.|+||++..+... ....+++|+..+++++||||+++++.+..+
T Consensus 7 ~~~~y~~~~~lg~g~~g--~vy~~~~~~~~~~~aik~~~~~~~~--~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~---- 78 (267)
T cd06646 7 PQHDYELIQRVGSGTYG--DVYKARNLHTGELAAVKIIKLEPGD--DFSLIQQEIFMVKECKHCNIVAYFGSYLSR---- 78 (267)
T ss_pred chhhcchhheeecCCCe--EEEEEEECCCCeEEEEEEEecCccc--hHHHHHHHHHHHHhcCCCCeeeeeEEEEeC----
Confidence 456799999999998 8 8999999999999999999754322 345688999999999999999999999864
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..+|+||||+ ++|.+++..... .....+.+++.|++.||.|||+ .+++||||+|+||+++.+|.+||+||
T Consensus 79 ----~~~~iv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~nill~~~~~~~l~df 150 (267)
T cd06646 79 ----EKLWICMEYCGGGSLQDIYHVTGP---LSELQIAYVCRETLQGLAYLHS-KGKMHRDIKGANILLTDNGDVKLADF 150 (267)
T ss_pred ----CEEEEEEeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEECCCCCEEECcC
Confidence 3899999999 479888865432 2344567779999999999995 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-hh-----
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-LR----- 247 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-l~----- 247 (778)
|++..+...... .....+...|+|||.+.... ...++.++|+|||||++|||++|+.|+.... ..
T Consensus 151 g~~~~~~~~~~~------~~~~~~~~~y~~PE~~~~~~---~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~ 221 (267)
T cd06646 151 GVAAKITATIAK------RKSFIGTPYWMAPEVAAVEK---NGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLM 221 (267)
T ss_pred ccceeecccccc------cCccccCccccCHhHccccc---CCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheee
Confidence 999876432110 11123345899999875311 1245678999999999999999988763211 00
Q ss_pred -----------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -----------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++++||..+|.+||+++++++|.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 222 SKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred ecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 0123466788999999999999999999999885
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=297.25 Aligned_cols=241 Identities=14% Similarity=0.164 Sum_probs=187.3
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.||.|+ | +||.++++.+++.|+||++..... .......+++|+++++.++||||+++++.++++
T Consensus 2 ~f~~~~~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~------ 73 (360)
T cd05627 2 DFESLKVIGRGAFG--EVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDK------ 73 (360)
T ss_pred CceEEEEEeeCCCE--EEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcC------
Confidence 589999999998 8 999999999999999999975322 223456788999999999999999999999864
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
.++||||||| ++|.+++.+.... ....++.++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~E~~~gg~L~~~l~~~~~l---~~~~~~~~~~qi~~~L~~lH~-~givHrDLkp~NIli~~~~~vkL~DfG~ 147 (360)
T cd05627 74 --RNLYLIMEFLPGGDMMTLLMKKDTL---SEEATQFYIAETVLAIDAIHQ-LGFIHRDIKPDNLLLDAKGHVKLSDFGL 147 (360)
T ss_pred --CEEEEEEeCCCCccHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeEccCCCHHHEEECCCCCEEEeeccC
Confidence 4899999999 5799988765432 234456669999999999995 9999999999999999999999999999
Q ss_pred ccccCCCCCCCC-----------------------------CCccccccccCCCCCCccccccccccccCCCCCcchhHH
Q 004025 176 LSEFDGNNEAAN-----------------------------GPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWG 226 (778)
Q Consensus 176 a~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwS 226 (778)
+..+........ .....+...++..|+|||++.+ ..++.++|+||
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~------~~~~~~~DiwS 221 (360)
T cd05627 148 CTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQ------TGYNKLCDWWS 221 (360)
T ss_pred CcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcC------CCCCCcceecc
Confidence 875532110000 0000112345568999999876 46778999999
Q ss_pred HHHHHHHHHhCCCCCChhhhh-------c---c------CCCCcchHHHHHHHhccCCCCCCC---hHHHHhcc
Q 004025 227 LGCLIYELFSGMRLSKTEELR-------N---T------ASIPKSLLPDYQRLLSSMPSRRLN---SSKLIENS 281 (778)
Q Consensus 227 LG~liyel~tg~~p~~~~~l~-------~---~------~~iP~~L~~~i~~lL~~dP~~Rps---~~~lL~~~ 281 (778)
|||++|||++|.+||...... . . ..++..+.+++.+|+. +|..|++ +.++++|+
T Consensus 222 lGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp 294 (360)
T cd05627 222 LGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHP 294 (360)
T ss_pred ccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCC
Confidence 999999999999998543211 0 1 1244567778888774 9999984 78999998
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.6e-31 Score=274.03 Aligned_cols=241 Identities=20% Similarity=0.228 Sum_probs=194.2
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.+|.|+ | .||++.++.+|..|++|.+..+.......+.+.+|++++++++||||+++++.+....
T Consensus 1 ~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~------ 72 (265)
T cd08217 1 DYEVLETIGKGSFG--TVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRS------ 72 (265)
T ss_pred CceeeeeeccCCCe--EEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCC------
Confidence 589999999987 7 9999999999999999999876555555677889999999999999999999886543
Q ss_pred ccEEEEEecCC--cChHHHHHHhCc-CCCcchHHHHHHHHHHHHHHHHHH-----cCCCccccccCCCCeEEcCCCcEEE
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLN-----NDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH-----~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
...+|++|||+ ++|.+++..... ........+..++.||+.||.||| + .+++|+||+|+||+++.+|.+||
T Consensus 73 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~-~~i~h~dl~p~nili~~~~~~kl 151 (265)
T cd08217 73 NQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPG-NTVLHRDLKPANIFLDANNNVKL 151 (265)
T ss_pred CCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCcccc-CcceecCCCHHHEEEecCCCEEE
Confidence 34789999999 479998876422 122234456667999999999999 5 78999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc--
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN-- 248 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~-- 248 (778)
+|||++......... .....+...|+|||++.+. ..+.++|+||||+++|+|++|..|+.......
T Consensus 152 ~d~g~~~~~~~~~~~------~~~~~~~~~~~~pE~~~~~------~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~ 219 (265)
T cd08217 152 GDFGLAKILGHDSSF------AKTYVGTPYYMSPEQLNHM------SYDEKSDIWSLGCLIYELCALSPPFTARNQLQLA 219 (265)
T ss_pred ecccccccccCCccc------ccccccCCCccChhhhcCC------CCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHH
Confidence 999999877543210 1112345589999998763 46678999999999999999998876432111
Q ss_pred -----------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -----------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++.+||..+|.+||++.++++|+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~ 263 (265)
T cd08217 220 SKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLP 263 (265)
T ss_pred HHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCC
Confidence 124556788999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7e-32 Score=293.17 Aligned_cols=227 Identities=17% Similarity=0.267 Sum_probs=185.5
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~lyI 104 (778)
-+|+|. | .||.|+.+ ++.||||++.. +-..+|+-|++|+|||||+|.+++... ..+||
T Consensus 131 WlGSGaQG--AVF~Grl~--netVAVKKV~e---------lkETdIKHLRkLkH~NII~FkGVCtqs--------PcyCI 189 (904)
T KOG4721|consen 131 WLGSGAQG--AVFLGRLH--NETVAVKKVRE---------LKETDIKHLRKLKHPNIITFKGVCTQS--------PCYCI 189 (904)
T ss_pred hhccCccc--ceeeeecc--CceehhHHHhh---------hhhhhHHHHHhccCcceeeEeeeecCC--------ceeEE
Confidence 368888 8 89999986 89999998752 234578999999999999999999753 48999
Q ss_pred EecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCCC
Q 004025 105 VTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGN 182 (778)
Q Consensus 105 VtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~ 182 (778)
||||| +.|..+|+..... .....+.| -.+|+.|+.|||. .+|||||||.-||+|+.+..+||+|||-++...+-
T Consensus 190 iMEfCa~GqL~~VLka~~~i--tp~llv~W-sk~IA~GM~YLH~-hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~ 265 (904)
T KOG4721|consen 190 IMEFCAQGQLYEVLKAGRPI--TPSLLVDW-SKGIAGGMNYLHL-HKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK 265 (904)
T ss_pred eeeccccccHHHHHhccCcc--CHHHHHHH-HHHhhhhhHHHHH-hhHhhhccCCCceEeeccceEEeccccchHhhhhh
Confidence 99999 7899999876532 12233444 8999999999995 89999999999999999999999999999887652
Q ss_pred CCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh--------------hc
Q 004025 183 NEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------------RN 248 (778)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l--------------~~ 248 (778)
-....+.++..|||||++++ .....++||||||+++|||++|..||..-+- ..
T Consensus 266 -------STkMSFaGTVaWMAPEvIrn------ePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~Lpv 332 (904)
T KOG4721|consen 266 -------STKMSFAGTVAWMAPEVIRN------EPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPV 332 (904)
T ss_pred -------hhhhhhhhhHhhhCHHHhhc------CCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccC
Confidence 12345566679999999998 5778899999999999999999988854221 11
Q ss_pred cCCCCcchHHHHHHHhccCCCCCCChHHHHhcccCCccccccccchhhh
Q 004025 249 TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQNKLVD 297 (778)
Q Consensus 249 ~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff~n~lv~ 297 (778)
...+|+.+.=+++.||+..|..||++.+++.|- ..|.-.+..
T Consensus 333 PstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hl-------dIa~pell~ 374 (904)
T KOG4721|consen 333 PSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHL-------DIASPELLS 374 (904)
T ss_pred cccCchHHHHHHHHHHhcCCCCCccHHHHHHHH-------hhcCHHHhc
Confidence 246788899999999999999999999999996 556554443
|
|
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-31 Score=291.79 Aligned_cols=248 Identities=17% Similarity=0.252 Sum_probs=194.3
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..|++.+.||.|+ | +||.|+++.+|+.|+||.+.+..........+.+|+.++++++||||+++++++...... .
T Consensus 16 ~~y~~~~~lg~g~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~--~ 91 (353)
T cd07850 16 KRYQNLKPIGSGAQG--IVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSL--E 91 (353)
T ss_pred cceEEEEEeccCCCE--EEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCc--c
Confidence 4699999999998 8 899999999999999999876544444456677899999999999999999998643210 0
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
.....|+||||+ ++|.+.+... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 92 ~~~~~~lv~e~~~~~l~~~~~~~-----l~~~~~~~~~~ql~~aL~~LH~-~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~ 165 (353)
T cd07850 92 EFQDVYLVMELMDANLCQVIQMD-----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLA 165 (353)
T ss_pred ccCcEEEEEeccCCCHHHHHhhc-----CCHHHHHHHHHHHHHHHHHHHh-CCeeeCCCCHHHEEECCCCCEEEccCccc
Confidence 024689999999 5687777543 2234466679999999999995 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh--------h-
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------R- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l--------~- 247 (778)
....... ......++..|+|||++.+ ..++.++|+|||||++|+|++|+.+|...+. .
T Consensus 166 ~~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~ 232 (353)
T cd07850 166 RTAGTSF-------MMTPYVVTRYYRAPEVILG------MGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQ 232 (353)
T ss_pred eeCCCCC-------CCCCCcccccccCHHHHhC------CCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHh
Confidence 8764321 1112234558999999876 3567899999999999999999987742210 0
Q ss_pred --------------------------------c--------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 --------------------------------N--------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 --------------------------------~--------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ....+..+.+++.+||..||.+||++.++|+|+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~ 312 (353)
T cd07850 233 LGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHP 312 (353)
T ss_pred cCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcCh
Confidence 0 001234467899999999999999999999999
Q ss_pred cCCccccccccc
Q 004025 282 VGDFWMTEYFQN 293 (778)
Q Consensus 282 ~~~~w~~~ff~n 293 (778)
|+..||..
T Consensus 313 ----~~~~~~~~ 320 (353)
T cd07850 313 ----YINVWYDP 320 (353)
T ss_pred ----hHhhccCC
Confidence 87777764
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.4e-31 Score=278.62 Aligned_cols=242 Identities=16% Similarity=0.162 Sum_probs=186.8
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHH-HHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVK-RLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~-~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.+|.|+ | .||+|+++.+|+.|+||.+......+...+ +..|+. .++.+.||||+++++.++.+
T Consensus 2 ~~~~~~~ig~g~~g--~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~iv~~~~~~~~~------ 72 (283)
T cd06617 2 DLEVIEELGRGAYG--VVDKMRHVPTGTIMAVKRIRATVNSQEQKR-LLMDLDISMRSVDCPYTVTFYGALFRE------ 72 (283)
T ss_pred CceEEEEecccCCe--EEEEEEEcCCCcEEEEEEEecCCCcHHHHH-HHHHHHHHHHHcCCCCeeeeeEEEecC------
Confidence 699999999998 8 899999999999999999987544333333 444555 46778899999999999864
Q ss_pred cccEEEEEecCC-cChHHHHHHhCc-CCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+|+||||+ +.|..++..... ........+..++.||+.||.|||+.++++||||||+||+++.++.+||+|||+
T Consensus 73 --~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~ 150 (283)
T cd06617 73 --GDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGI 150 (283)
T ss_pred --CcEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccc
Confidence 3799999999 578887765322 222334456677999999999999645999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCCh-----hhhhc--
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT-----EELRN-- 248 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~-----~~l~~-- 248 (778)
+....... ......+...|+|||++.+... ...++.++|+|||||++|+|++|..||.. +.+..
T Consensus 151 ~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~--~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~ 221 (283)
T cd06617 151 SGYLVDSV-------AKTIDAGCKPYMAPERINPELN--QKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVV 221 (283)
T ss_pred cccccccc-------ccccccCCccccChhhcCCccc--ccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHH
Confidence 87664321 0111234457999998865211 13456789999999999999999988753 11111
Q ss_pred --------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 --------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 --------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+|..+.+++.+||..+|..||++.++++|+
T Consensus 222 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~ 262 (283)
T cd06617 222 EEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHP 262 (283)
T ss_pred hcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 124667789999999999999999999999997
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-31 Score=296.22 Aligned_cols=240 Identities=21% Similarity=0.281 Sum_probs=204.6
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..|.+.+.||.|. + +|..|++..++..||||.+++...+...+..+.+|+++|+.|+||||++++.+++++
T Consensus 56 g~y~i~~tig~g~f~--~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~------ 127 (596)
T KOG0586|consen 56 GLYVIIKTIGKGNFA--KVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETE------ 127 (596)
T ss_pred cceeeeeeeccceeE--EEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeec------
Confidence 3699999999998 7 999999999999999999999877776667789999999999999999999999984
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+|+||||+ +.+.++|.+.+..... .....+.|+++|++|||. .+|||||||.+||+++.+.++||+|||+
T Consensus 128 --~~lylV~eya~~ge~~~yl~~~gr~~e~---~ar~~F~q~vsaveYcH~-k~ivHrdLk~eNilL~~~mnikIaDfgf 201 (596)
T KOG0586|consen 128 --ATLYLVMEYASGGELFDYLVKHGRMKEK---EARAKFRQIVSAVEYCHS-KNIVHRDLKAENILLDENMNIKIADFGF 201 (596)
T ss_pred --ceeEEEEEeccCchhHHHHHhcccchhh---hhhhhhHHHHHHHHHHhh-cceeccccchhhcccccccceeeecccc
Confidence 4999999999 5799999988754432 233448999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhcc------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT------ 249 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~~------ 249 (778)
+..+.... + ...+++.+.|.|||++.+. ......+|+|+||+++|.|+.|..||+...+..+
T Consensus 202 S~~~~~~~------~-lqt~cgsppyAaPEl~~g~-----~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~ 269 (596)
T KOG0586|consen 202 STFFDYGL------M-LQTFCGSPPYAAPELFNGK-----KYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLR 269 (596)
T ss_pred ceeecccc------c-ccccCCCCCccChHhhcCc-----ccCCcceehhhhhhhheeeeecccccCCcccccccchhee
Confidence 99887421 1 2345777899999999874 4667899999999999999999999987665443
Q ss_pred --CCCCc----chHHHHHHHhccCCCCCCChHHHHhcccCCcccc
Q 004025 250 --ASIPK----SLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMT 288 (778)
Q Consensus 250 --~~iP~----~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~ 288 (778)
..||- ....+++++|-.+|.+|++.++++.+. |+.
T Consensus 270 gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~----W~n 310 (596)
T KOG0586|consen 270 GKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDR----WRN 310 (596)
T ss_pred eeecccceeechhHHHHHHhhccCccccCCHHHhhhhc----ccc
Confidence 45554 456678888889999999999999997 664
|
|
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.9e-31 Score=284.38 Aligned_cols=237 Identities=18% Similarity=0.248 Sum_probs=177.7
Q ss_pred ccCCCCCC-CceEEEEeEECC--CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCccc
Q 004025 24 GDPYPSAW-GSWSHFQGTSKD--DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKI 100 (778)
Q Consensus 24 ~~~lg~g~-g~w~Vy~g~~k~--~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~ 100 (778)
+.+||.|+ | +||+|+++. ++..|++|.+..... ...+.+|+++|+.++||||+++++++.... ..
T Consensus 6 g~~lG~G~~g--~Vy~~~~~~~~~~~~~a~k~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~~ 73 (317)
T cd07867 6 GCKVGRGTYG--HVYKAKRKDGKDEKEYALKQIEGTGI----SMSACREIALLRELKHPNVIALQKVFLSHS------DR 73 (317)
T ss_pred ceEeccCCCe--eEEEEEecCCCccceEEEEEecCCCC----cHHHHHHHHHHHhCCCCCeeeEEEEEeccC------CC
Confidence 35789988 8 999999764 568899999875422 234678999999999999999999987543 34
Q ss_pred EEEEEecCC-cChHHHHHHhCc------CCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEE----cCCCcEE
Q 004025 101 TIYIVTEPV-MPLSEKIKELGL------EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV----TQTLDWK 169 (778)
Q Consensus 101 ~lyIVtE~v-~~L~~~L~~~~~------~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v----~~~g~~K 169 (778)
.+|+|+||+ ++|..++..... ........+..++.||+.||.|||+ .+++||||||+||++ +.+|.+|
T Consensus 74 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~-~~ivH~Dlkp~Nil~~~~~~~~~~~k 152 (317)
T cd07867 74 KVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA-NWVLHRDLKPANILVMGEGPERGRVK 152 (317)
T ss_pred eEEEEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh-CCEEcCCCCHHHEEEccCCCCCCcEE
Confidence 899999999 568777754321 1112344566779999999999995 899999999999999 5678999
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh---
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--- 246 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l--- 246 (778)
|+|||+++.......... ......++..|+|||++.+. ..++.++|+|||||++|||++|.++|.....
T Consensus 153 l~DfG~a~~~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~ 224 (317)
T cd07867 153 IADMGFARLFNSPLKPLA---DLDPVVVTFWYRAPELLLGA-----RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIK 224 (317)
T ss_pred EeeccceeccCCCccccc---ccCcceecccccCcHHhcCC-----CccCcHHHHHhHHHHHHHHHhCCCCccccccccc
Confidence 999999987654211000 01122345589999998653 3467889999999999999999988742110
Q ss_pred ----------h------------------cc----------------------------CCCCcchHHHHHHHhccCCCC
Q 004025 247 ----------R------------------NT----------------------------ASIPKSLLPDYQRLLSSMPSR 270 (778)
Q Consensus 247 ----------~------------------~~----------------------------~~iP~~L~~~i~~lL~~dP~~ 270 (778)
. .. ......+.+++.+||..||.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~ 304 (317)
T cd07867 225 TSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTK 304 (317)
T ss_pred ccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCccc
Confidence 0 00 011223567899999999999
Q ss_pred CCChHHHHhcc
Q 004025 271 RLNSSKLIENS 281 (778)
Q Consensus 271 Rps~~~lL~~~ 281 (778)
|||+.++++|+
T Consensus 305 R~t~~e~l~hp 315 (317)
T cd07867 305 RITSEQALQDP 315 (317)
T ss_pred ccCHHHHhcCC
Confidence 99999999998
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=276.91 Aligned_cols=242 Identities=16% Similarity=0.213 Sum_probs=195.2
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.+|.|+ | .||+|+++.+++.|+||++..... ......+.+|+++++.++||||+++++.+..+
T Consensus 2 ~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 71 (274)
T cd06609 2 LFTLLECIGKGSFG--EVYKAIDKRTNQVVAIKVIDLEEA-EDEIEDIQQEIQFLSQCRSPYITKYYGSFLKG------- 71 (274)
T ss_pred hhhhhhhhcCCCCe--EEEEEEECCCCeEEEEEEeecccc-chHHHHHHHHHHHHHHcCCCCeeeeeEEEEEC-------
Confidence 589999999987 7 899999999999999999986532 23455688999999999999999999998864
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|+|+||+ ++|.+++.... .....+.+++.||+.||.|||+ .+++||||+|+||+++.+|.++|+|||++
T Consensus 72 -~~~~~v~e~~~~~~L~~~~~~~~----~~~~~~~~~~~ql~~~l~~lh~-~~i~h~dl~p~ni~i~~~~~~~l~d~g~~ 145 (274)
T cd06609 72 -SKLWIIMEYCGGGSCLDLLKPGK----LDETYIAFILREVLLGLEYLHE-EGKIHRDIKAANILLSEEGDVKLADFGVS 145 (274)
T ss_pred -CeEEEEEEeeCCCcHHHHHhhcC----CCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEECCCCCEEEcccccc
Confidence 4899999999 47988887652 2345577779999999999995 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc--------
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN-------- 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~-------- 248 (778)
..+...... .........|++||++.+. .++.++|+|||||++|+|++|..||.......
T Consensus 146 ~~~~~~~~~------~~~~~~~~~y~~PE~~~~~------~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~ 213 (274)
T cd06609 146 GQLTSTMSK------RNTFVGTPFWMAPEVIKQS------GYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKN 213 (274)
T ss_pred eeecccccc------cccccCCccccChhhhccC------CCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhc
Confidence 877543111 1112334579999998763 47789999999999999999999885421100
Q ss_pred -c----C-CCCcchHHHHHHHhccCCCCCCChHHHHhcccCCccccccccc
Q 004025 249 -T----A-SIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQN 293 (778)
Q Consensus 249 -~----~-~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff~n 293 (778)
. . .+|..+.+++.+||..+|.+||++.++++|+ |+....++
T Consensus 214 ~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~----~~~~~~~~ 260 (274)
T cd06609 214 NPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHK----FIKKAKKT 260 (274)
T ss_pred CCCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhCh----hhcCCCcc
Confidence 0 1 2667789999999999999999999999998 55444443
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-31 Score=288.03 Aligned_cols=231 Identities=16% Similarity=0.207 Sum_probs=179.4
Q ss_pred cCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecccccCCcccE
Q 004025 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDATSTKIT 101 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~g~~~~~~ 101 (778)
+.||.|+ | .||.|+++.+|+.|+||++.+... .+.....+..|.++++.+ +||||+++++.++.+ .+
T Consensus 1 ~~lg~G~~g--~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~--------~~ 70 (316)
T cd05620 1 KVLGKGSFG--KVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTK--------EH 70 (316)
T ss_pred CeeeeCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeC--------CE
Confidence 3578887 8 999999999999999999986421 112345567788888754 899999999999874 48
Q ss_pred EEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccccc
Q 004025 102 IYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (778)
Q Consensus 102 lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~ 179 (778)
+||||||+ ++|..++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++...
T Consensus 71 ~~lv~E~~~~g~L~~~i~~~~~~---~~~~~~~~~~qi~~~l~~lH~-~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~ 146 (316)
T cd05620 71 LFFVMEFLNGGDLMFHIQDKGRF---DLYRATFYAAEIVCGLQFLHS-KGIIYRDLKLDNVMLDRDGHIKIADFGMCKEN 146 (316)
T ss_pred EEEEECCCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHeEECCCCCEEeCccCCCeec
Confidence 99999999 5788888764322 233455668999999999995 89999999999999999999999999998753
Q ss_pred CCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc--------c--
Q 004025 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN--------T-- 249 (778)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~--------~-- 249 (778)
..... ......++..|+|||++.+ ..++.++|+|||||++|||++|..||....... .
T Consensus 147 ~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~ 214 (316)
T cd05620 147 VFGDN------RASTFCGTPDYIAPEILQG------LKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPH 214 (316)
T ss_pred ccCCC------ceeccCCCcCccCHHHHcC------CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC
Confidence 22110 1112344568999999876 356789999999999999999999886432111 1
Q ss_pred --CCCCcchHHHHHHHhccCCCCCCCh-HHHHhcc
Q 004025 250 --ASIPKSLLPDYQRLLSSMPSRRLNS-SKLIENS 281 (778)
Q Consensus 250 --~~iP~~L~~~i~~lL~~dP~~Rps~-~~lL~~~ 281 (778)
..++..+.+++++||..||.+|+++ +++++|+
T Consensus 215 ~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~ 249 (316)
T cd05620 215 YPRWITKESKDILEKLFERDPTRRLGVVGNIRGHP 249 (316)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCC
Confidence 1245568889999999999999998 5788887
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-31 Score=288.21 Aligned_cols=230 Identities=17% Similarity=0.216 Sum_probs=178.4
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhc-CCCCCeeeEeeeeEecccccCCcccEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRT-VRHPNILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~-LrHPnIlk~~d~~e~e~~~g~~~~~~l 102 (778)
.||.|+ | +||+|+++.+++.|+||++.+... .+...+.+..|..++.. ++||||+++++.++.+ ..+
T Consensus 2 ~lG~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~--------~~~ 71 (316)
T cd05592 2 VLGKGSFG--KVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTK--------EHL 71 (316)
T ss_pred eeeeCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcC--------CEE
Confidence 578887 8 999999999999999999986422 12234445566666665 4799999999999864 489
Q ss_pred EEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccC
Q 004025 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (778)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~ 180 (778)
||||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++....
T Consensus 72 ~lv~e~~~gg~L~~~~~~~~~---~~~~~~~~~~~qi~~al~~LH~-~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~ 147 (316)
T cd05592 72 FFVMEYLNGGDLMFHIQSSGR---FDEARARFYAAEIICGLQFLHK-KGIIYRDLKLDNVLLDKDGHIKIADFGMCKENM 147 (316)
T ss_pred EEEEcCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCEEeCCCCHHHeEECCCCCEEEccCcCCeECC
Confidence 9999999 578888876542 2334456668999999999995 899999999999999999999999999987653
Q ss_pred CCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh--------cc---
Q 004025 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------NT--- 249 (778)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~--------~~--- 249 (778)
.... ......++..|+|||++.+ ..++.++|+|||||++|||++|..||...... ..
T Consensus 148 ~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~ 215 (316)
T cd05592 148 NGEG------KASTFCGTPDYIAPEILKG------QKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHF 215 (316)
T ss_pred CCCC------ccccccCCccccCHHHHcC------CCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 3211 0112234568999999876 35678899999999999999999998643211 11
Q ss_pred -CCCCcchHHHHHHHhccCCCCCCChH-HHHhcc
Q 004025 250 -ASIPKSLLPDYQRLLSSMPSRRLNSS-KLIENS 281 (778)
Q Consensus 250 -~~iP~~L~~~i~~lL~~dP~~Rps~~-~lL~~~ 281 (778)
..++..+.+++.+||..+|.+|++.. ++++|+
T Consensus 216 ~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~ 249 (316)
T cd05592 216 PRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHP 249 (316)
T ss_pred CCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCc
Confidence 23556788899999999999999875 777887
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-31 Score=289.05 Aligned_cols=243 Identities=14% Similarity=0.123 Sum_probs=188.4
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.||.|+ | +||.++++.+++.|+||++.+... .....+.+++|+.+++.++||||++++++++++
T Consensus 2 ~y~~~~~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------ 73 (331)
T cd05597 2 DFEILKVIGRGAFG--EVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDE------ 73 (331)
T ss_pred CceEEEEEEecCCe--EEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecC------
Confidence 699999999998 8 999999999999999999975321 223455688999999999999999999999864
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
.++|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~e~~~g~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nill~~~~~~kl~Dfg~ 148 (331)
T cd05597 74 --NNLYLVMDYYVGGDLLTLLSKFED--RLPEDMARFYLAEMVLAIDSVHQ-LGYVHRDIKPDNVLLDKNGHIRLADFGS 148 (331)
T ss_pred --CeEEEEEecCCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh-CCeEECCCCHHHEEECCCCCEEEEECCc
Confidence 4899999999 579999876431 12344566679999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc-------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------- 248 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~------- 248 (778)
+..+...... ......++..|+|||++...-. ....++.++|+|||||++|+|++|..||.......
T Consensus 149 ~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~-~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~ 222 (331)
T cd05597 149 CLRLLADGTV-----QSNVAVGTPDYISPEILQAMED-GKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 222 (331)
T ss_pred eeecCCCCCc-----cccceeccccccCHHHHhhccc-cccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHc
Confidence 8766542211 1111235568999999863100 01245678999999999999999999886432110
Q ss_pred ----------cCCCCcchHHHHHHHhccCCC--CCCChHHHHhcc
Q 004025 249 ----------TASIPKSLLPDYQRLLSSMPS--RRLNSSKLIENS 281 (778)
Q Consensus 249 ----------~~~iP~~L~~~i~~lL~~dP~--~Rps~~~lL~~~ 281 (778)
...+|..+.+++++||...++ .|+++.++++|+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp 267 (331)
T cd05597 223 HKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHP 267 (331)
T ss_pred CCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCC
Confidence 123567788899998865444 388999999998
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.8e-31 Score=281.96 Aligned_cols=248 Identities=18% Similarity=0.239 Sum_probs=197.2
Q ss_pred hhhhhccccCCCCCCCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCC
Q 004025 2 FKFLKGVVGGSGAGVKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPN 80 (778)
Q Consensus 2 ~~~lk~~~~~s~~~~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPn 80 (778)
|++++..++-.. ...+|++.+.+|.|. | +||+|+++.+|+.|+||.+...... ..+.+.+|+..++.++|||
T Consensus 5 ~~~~~~~~~~~~---~~~~y~~~~~lg~g~~g--~vy~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~e~~~l~~l~h~~ 77 (296)
T cd06655 5 MEKLRTIVSIGD---PKKKYTRYEKIGQGASG--TVFTAIDVATGQEVAIKQINLQKQP--KKELIINEILVMKELKNPN 77 (296)
T ss_pred HHHHHHHHhcCC---CcceEEEEEEEecCCCe--EEEEEEEcCCCcEEEEEEEecccCc--hHHHHHHHHHHHHhcCCCc
Confidence 345555553222 456799999999998 8 8999999999999999999764332 3456889999999999999
Q ss_pred eeeEeeeeEecccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCC
Q 004025 81 ILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLS 158 (778)
Q Consensus 81 Ilk~~d~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~ 158 (778)
|+++++.+..+ ..+|+|+||+ ++|..++..... ....+..++.||+.||.|||+ .+++||||+|+
T Consensus 78 iv~~~~~~~~~--------~~~~lv~e~~~~~~L~~~~~~~~l----~~~~~~~i~~~l~~al~~LH~-~~i~H~dL~p~ 144 (296)
T cd06655 78 IVNFLDSFLVG--------DELFVVMEYLAGGSLTDVVTETCM----DEAQIAAVCRECLQALEFLHA-NQVIHRDIKSD 144 (296)
T ss_pred eeeeeeeEecC--------ceEEEEEEecCCCcHHHHHHhcCC----CHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHH
Confidence 99999999863 4899999999 468888865432 244566779999999999995 89999999999
Q ss_pred CeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCC
Q 004025 159 SVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM 238 (778)
Q Consensus 159 NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~ 238 (778)
||+++.+|.+||+|||++......... .....+...|+|||.+.+ ..++.++|+|||||++|+|++|.
T Consensus 145 Nili~~~~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slGvil~~lltg~ 212 (296)
T cd06655 145 NVLLGMDGSVKLTDFGFCAQITPEQSK------RSTMVGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMVEGE 212 (296)
T ss_pred HEEECCCCCEEEccCccchhccccccc------CCCcCCCccccCcchhcC------CCCCchhhHHHHHHHHHHHHhCC
Confidence 999999999999999998876442111 111233458999999876 34667899999999999999999
Q ss_pred CCCChhhh---------------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 239 RLSKTEEL---------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 239 ~p~~~~~l---------------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.||..... .....++..+.+++++||..+|.+||++.++++|+
T Consensus 213 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~ 270 (296)
T cd06655 213 PPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHP 270 (296)
T ss_pred CCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhCh
Confidence 88754211 11234566788999999999999999999999998
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.8e-31 Score=274.31 Aligned_cols=238 Identities=20% Similarity=0.259 Sum_probs=191.0
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.+|.|. | ++|.++.+.+|+.|+||.+............+.+|+.++++++||||+++++.++..
T Consensus 1 ~y~~~~~lg~g~~g--~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 71 (256)
T cd08218 1 KYVKVKKIGEGSFG--KAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEEN------- 71 (256)
T ss_pred CceEEEEeccCCce--EEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCC-------
Confidence 589999999998 8 899999999999999999986544444456789999999999999999999999763
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
.+.|+|+||+ ++|.+++....... .....+..++.||+.||.|||+ ++++|+||+|+||+++.++.++|+|||++
T Consensus 72 -~~~~lv~e~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~lh~-~~i~h~~l~~~nil~~~~~~~~l~d~~~~ 148 (256)
T cd08218 72 -GNLYIVMDYCEGGDLYKKINAQRGVL-FPEDQILDWFVQICLALKHVHD-RKILHRDIKSQNIFLTKDGTIKLGDFGIA 148 (256)
T ss_pred -CeEEEEEecCCCCcHHHHHHhccCCC-CCHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEEcCCCCEEEeeccce
Confidence 4899999999 47988887643211 1233455558999999999995 99999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc--------
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN-------- 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~-------- 248 (778)
......... .....+...|+|||+..+. ..+.++|+|||||++|+|++|..++.......
T Consensus 149 ~~~~~~~~~------~~~~~~~~~~~~pe~~~~~------~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~ 216 (256)
T cd08218 149 RVLNSTVEL------ARTCIGTPYYLSPEICENR------PYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRG 216 (256)
T ss_pred eecCcchhh------hhhccCCccccCHHHhCCC------CCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcC
Confidence 876542110 1112234579999998763 45678999999999999999998875432111
Q ss_pred -----cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -----~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++.+||+.+|.+||++.++++|+
T Consensus 217 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~ 254 (256)
T cd08218 217 SYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKN 254 (256)
T ss_pred CCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCc
Confidence 124566788999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.8e-31 Score=278.59 Aligned_cols=239 Identities=16% Similarity=0.266 Sum_probs=189.2
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.++++.|. | +||+|+++.+|..|+||++...... .....+.+|+.+++.++||||+++++.+..+
T Consensus 1 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------- 70 (284)
T cd07836 1 NFKQLEKLGEGTYA--TVYKGRNRTTGEIVALKEIHLDAEE-GTPSTAIREISLMKELKHENIVRLHDVIHTE------- 70 (284)
T ss_pred CceEeeeeccCCce--EEEEEEECCCCeEEEEEEecccccc-cchHHHHHHHHHHHhhcCCCEeeeeeeEeeC-------
Confidence 589999999997 7 8999999999999999999865332 2345677899999999999999999999874
Q ss_pred ccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 99 ~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
..+||||||+ ++|.+++.............+..++.||+.||.|||+ .+++||||+|+||+++++|.+||+|||++.
T Consensus 71 -~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~ 148 (284)
T cd07836 71 -NKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHE-NRVLHRDLKPQNLLINKRGELKLADFGLAR 148 (284)
T ss_pred -CcEEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHH-CCeeeCCCCHHHEEECCCCcEEEeecchhh
Confidence 3789999999 5788888765432223445566779999999999995 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh----------
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---------- 247 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~---------- 247 (778)
........ .....+...|++||++.+. ..++.++|+|+|||++|+|++|.++|......
T Consensus 149 ~~~~~~~~------~~~~~~~~~y~~PE~~~~~-----~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~ 217 (284)
T cd07836 149 AFGIPVNT------FSNEVVTLWYRAPDVLLGS-----RTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIM 217 (284)
T ss_pred hhcCCccc------cccccccccccChHHhcCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHh
Confidence 65432110 0111234479999987653 34567899999999999999999887532100
Q ss_pred ------------c-------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ------------N-------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ------------~-------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ...++..+.+++.+||+.+|.+||++.++++|+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~ 282 (284)
T cd07836 218 GTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHP 282 (284)
T ss_pred CCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCC
Confidence 0 013456778899999999999999999999997
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.4e-31 Score=291.51 Aligned_cols=231 Identities=12% Similarity=0.109 Sum_probs=180.6
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|++.+.||.|. | +||+|+++.++..|++|+.... ...+|+.+|++++||||+++++++...
T Consensus 64 ~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~valK~~~~~--------~~~~E~~~l~~l~h~~iv~~~~~~~~~---- 129 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEG--RVFVATKPGQPDPVVLKIGQKG--------TTLIEAMLLQNVNHPSVIRMKDTLVSG---- 129 (357)
T ss_pred hhcCcEEEEEecCCCCe--EEEEEEECCCCceEEEEeCCcc--------ccHHHHHHHHhCCCCCCcChhheEEeC----
Confidence 345799999999998 8 9999999999999999985432 234689999999999999999999864
Q ss_pred CCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
...|+|+|++ ++|..++...... .....+..++.||+.||.|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 130 ----~~~~lv~e~~~~~l~~~l~~~~~~--~~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~Nill~~~~~~kl~DfG 202 (357)
T PHA03209 130 ----AITCMVLPHYSSDLYTYLTKRSRP--LPIDQALIIEKQILEGLRYLHA-QRIIHRDVKTENIFINDVDQVCIGDLG 202 (357)
T ss_pred ----CeeEEEEEccCCcHHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECCCCCEEEecCc
Confidence 3789999999 6788888654321 2234456679999999999995 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCC-CCChh---------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMR-LSKTE--------- 244 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~-p~~~~--------- 244 (778)
+++....... .....++..|+|||++.+ ..++.++|+|||||++|||+++.. +|...
T Consensus 203 ~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~ 269 (357)
T PHA03209 203 AAQFPVVAPA-------FLGLAGTVETNAPEVLAR------DKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVK 269 (357)
T ss_pred cccccccCcc-------cccccccccccCCeecCC------CCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHH
Confidence 9875432110 112234568999999876 356789999999999999998543 32210
Q ss_pred ----hhh------------------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHH
Q 004025 245 ----ELR------------------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLI 278 (778)
Q Consensus 245 ----~l~------------------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL 278 (778)
.+. ....++..+..++.+||+.||.+|||+.+++
T Consensus 270 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l 349 (357)
T PHA03209 270 SCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEIL 349 (357)
T ss_pred HHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHh
Confidence 000 0013455566789999999999999999999
Q ss_pred hcc
Q 004025 279 ENS 281 (778)
Q Consensus 279 ~~~ 281 (778)
+|+
T Consensus 350 ~hp 352 (357)
T PHA03209 350 NYP 352 (357)
T ss_pred cCc
Confidence 998
|
|
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-31 Score=290.21 Aligned_cols=246 Identities=17% Similarity=0.257 Sum_probs=193.9
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.||.|+ | .||.|+++.+|..|+||++............+.+|+.+|+.++||||++++++++....+
T Consensus 5 ~~y~~~~~lg~g~~g--~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~--- 79 (334)
T cd07855 5 SRYKPIENIGSGAYG--VVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGAD--- 79 (334)
T ss_pred hceeeeeeeecCCCe--EEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCC---
Confidence 5799999999987 7 899999999999999999986543334456678899999999999999999988754322
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
...+|+|+||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 80 -~~~~~lv~e~~~~~l~~~~~~~~~---~~~~~~~~i~~qi~~aL~~LH~-~~ivH~dlkp~Nil~~~~~~~kl~dfg~~ 154 (334)
T cd07855 80 -FKDVYVVMDLMESDLHHIIHSDQP---LTEEHIRYFLYQLLRGLKYIHS-ANVIHRDLKPSNLLVNEDCELRIGDFGMA 154 (334)
T ss_pred -CceEEEEEehhhhhHHHHhccCCC---CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEEcCCCcEEecccccc
Confidence 35899999999 567777754332 3345567779999999999995 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----------
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---------- 246 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l---------- 246 (778)
.......... ........++..|+|||.+.+. ..++.++|+|||||++|||++|.+||.....
T Consensus 155 ~~~~~~~~~~--~~~~~~~~~~~~y~~PE~~~~~-----~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~ 227 (334)
T cd07855 155 RGLSSSPTEH--KYFMTEYVATRWYRAPELLLSL-----PEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSV 227 (334)
T ss_pred eeecccCcCC--CcccccccccccccChHHhcCC-----cccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHH
Confidence 7765432111 1111123445689999997652 2467789999999999999999988843210
Q ss_pred -----------------h----c------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 -----------------R----N------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 -----------------~----~------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. . ...++..+.+++++||+.+|.+||++.+++.|+
T Consensus 228 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~ 295 (334)
T cd07855 228 LGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHP 295 (334)
T ss_pred hCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhCh
Confidence 0 0 123567788999999999999999999999998
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-31 Score=290.30 Aligned_cols=230 Identities=15% Similarity=0.179 Sum_probs=178.0
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHH-HHHhcCCCCCeeeEeeeeEecccccCCcccEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGV-KRLRTVRHPNILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev-~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~l 102 (778)
.||.|+ | +||+|+++.+++.|+||++.++.... .....+.+|. ..++.++||||+++++.++.+ ..+
T Consensus 2 ~lg~G~fg--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~--------~~~ 71 (325)
T cd05602 2 VIGKGSFG--KVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTA--------DKL 71 (325)
T ss_pred eeeeCCCe--EEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcC--------CeE
Confidence 578887 8 99999999999999999998642211 1222333343 457889999999999999864 489
Q ss_pred EEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccC
Q 004025 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (778)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~ 180 (778)
|+||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++....
T Consensus 72 ~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~qi~~~L~~lH~-~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~ 147 (325)
T cd05602 72 YFVLDYINGGELFYHLQRERC---FLEPRARFYAAEIASALGYLHS-LNIVYRDLKPENILLDSQGHIVLTDFGLCKENI 147 (325)
T ss_pred EEEEeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHeEECCCCCEEEccCCCCcccc
Confidence 9999999 478888876432 2234456678999999999995 999999999999999999999999999987543
Q ss_pred CCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh------------c
Q 004025 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------------N 248 (778)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------------~ 248 (778)
.... ......++..|+|||++.+ ..++.++|+|||||++|+|++|.+||...... .
T Consensus 148 ~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~ 215 (325)
T cd05602 148 EHNG------TTSTFCGTPEYLAPEVLHK------QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQL 215 (325)
T ss_pred cCCC------CcccccCCccccCHHHHcC------CCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCC
Confidence 2211 0112245568999999876 35678999999999999999999988542211 1
Q ss_pred cCCCCcchHHHHHHHhccCCCCCCChH----HHHhcc
Q 004025 249 TASIPKSLLPDYQRLLSSMPSRRLNSS----KLIENS 281 (778)
Q Consensus 249 ~~~iP~~L~~~i~~lL~~dP~~Rps~~----~lL~~~ 281 (778)
...++..+.+++++||..+|.+|++.. ++++|+
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~ 252 (325)
T cd05602 216 KPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHI 252 (325)
T ss_pred CCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCc
Confidence 235777889999999999999999876 677776
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-31 Score=288.67 Aligned_cols=230 Identities=15% Similarity=0.187 Sum_probs=176.0
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHH-HHHhcCCCCCeeeEeeeeEecccccCCcccEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGV-KRLRTVRHPNILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev-~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~l 102 (778)
.||.|+ | +||+|+++.+|+.|+||++.+.... ......+.+|. .+++.++||||+++++.++.. ..+
T Consensus 2 ~lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~--------~~~ 71 (321)
T cd05603 2 VIGKGSFG--KVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTA--------EKL 71 (321)
T ss_pred eeeeCCCE--EEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcC--------CEE
Confidence 577787 7 9999999999999999999864321 12223344444 468899999999999999864 489
Q ss_pred EEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccC
Q 004025 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (778)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~ 180 (778)
||||||| ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++....
T Consensus 72 ~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~L~~lH~-~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 147 (321)
T cd05603 72 YFVLDYVNGGELFFHLQRERC---FLEPRARFYAAEVASAIGYLHS-LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGV 147 (321)
T ss_pred EEEEcCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeEeccCCHHHeEECCCCCEEEccCCCCccCC
Confidence 9999999 478877765432 2344466679999999999995 999999999999999999999999999987543
Q ss_pred CCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc--------c---
Q 004025 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN--------T--- 249 (778)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~--------~--- 249 (778)
.... ......++..|+|||++.+ ..++.++|+|||||++|||++|..||....... .
T Consensus 148 ~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~ 215 (321)
T cd05603 148 EPEE------TTSTFCGTPEYLAPEVLRK------EPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQL 215 (321)
T ss_pred CCCC------ccccccCCcccCCHHHhcC------CCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCC
Confidence 2111 0112234568999999876 356779999999999999999999986432211 1
Q ss_pred -CCCCcchHHHHHHHhccCCCCCCCh----HHHHhcc
Q 004025 250 -ASIPKSLLPDYQRLLSSMPSRRLNS----SKLIENS 281 (778)
Q Consensus 250 -~~iP~~L~~~i~~lL~~dP~~Rps~----~~lL~~~ 281 (778)
...+..+.+++.+||+.+|.+|++. .++++|+
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~ 252 (321)
T cd05603 216 PGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHV 252 (321)
T ss_pred CCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCC
Confidence 1234457889999999999999976 4777776
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.5e-31 Score=282.70 Aligned_cols=245 Identities=19% Similarity=0.243 Sum_probs=189.6
Q ss_pred CceeccCCCCCC-CceEEEEeEECC--CCCcEEEEEEeCCC-CchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKD--DGSPVSIFSISGTN-AQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~--~g~~VaIK~~~~~~-~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
.|++.+.||.|+ | .||+|+++. ++..|+||.+.... ..+...+.+.+|+.+++.++||||+++++.+....
T Consensus 1 ~y~~~~~ig~g~~g--~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--- 75 (316)
T cd07842 1 KYEIEGCIGRGTYG--RVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHA--- 75 (316)
T ss_pred CceEEEEeccCCcE--EEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCC---
Confidence 489999999998 7 899999998 89999999998643 11233456788999999999999999999998753
Q ss_pred CCcccEEEEEecCC-cChHHHHHHhCcCC--CcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC----CCcE
Q 004025 96 TSTKITIYIVTEPV-MPLSEKIKELGLEG--SQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ----TLDW 168 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~~L~~~L~~~~~~~--~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~----~g~~ 168 (778)
...+|+||||+ ++|..++....... ......+..++.||+.||.|||+ .+++||||||+||+++. +|.+
T Consensus 76 ---~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~i~h~dlkp~Nil~~~~~~~~~~~ 151 (316)
T cd07842 76 ---DKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHS-NWVLHRDLKPANILVMGEGPERGVV 151 (316)
T ss_pred ---CceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHh-CCEeeCCCCHHHEEEcCCCCccceE
Confidence 24899999999 46777776543221 23445577789999999999995 89999999999999999 9999
Q ss_pred EEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc
Q 004025 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN 248 (778)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~ 248 (778)
||+|||++..+...... ........++..|+|||++.+. ..++.++|+|||||++|+|++|.++|.......
T Consensus 152 kl~Dfg~~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~ 223 (316)
T cd07842 152 KIGDLGLARLFNAPLKP---LADLDPVVVTIWYRAPELLLGA-----RHYTKAIDIWAIGCIFAELLTLEPIFKGREAKI 223 (316)
T ss_pred EECCCccccccCCCccc---ccccCCccccccccCHHHHhCC-----CCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccc
Confidence 99999998876543210 1111122345579999987653 345678999999999999999998875321100
Q ss_pred -------------------------------------------cC---------------CCCcchHHHHHHHhccCCCC
Q 004025 249 -------------------------------------------TA---------------SIPKSLLPDYQRLLSSMPSR 270 (778)
Q Consensus 249 -------------------------------------------~~---------------~iP~~L~~~i~~lL~~dP~~ 270 (778)
.. ..+..+.+++.+||..||++
T Consensus 224 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~ 303 (316)
T cd07842 224 KKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTK 303 (316)
T ss_pred cccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCccc
Confidence 00 23345778899999999999
Q ss_pred CCChHHHHhcc
Q 004025 271 RLNSSKLIENS 281 (778)
Q Consensus 271 Rps~~~lL~~~ 281 (778)
||++.++++|+
T Consensus 304 Rps~~eil~~~ 314 (316)
T cd07842 304 RITAEEALEHP 314 (316)
T ss_pred CcCHHHHhcCC
Confidence 99999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-31 Score=291.62 Aligned_cols=232 Identities=17% Similarity=0.202 Sum_probs=182.9
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~ 99 (778)
+.+.++||.|. | .||.|+.+ ....|+||.+...... .+.+.+|+++|++|+|+|||++++++..+.
T Consensus 208 l~l~~~LG~G~FG--~V~~g~~~-~~~~vavk~ik~~~m~---~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~------- 274 (468)
T KOG0197|consen 208 LKLIRELGSGQFG--EVWLGKWN-GSTKVAVKTIKEGSMS---PEAFLREAQIMKKLRHEKLVKLYGVCTKQE------- 274 (468)
T ss_pred HHHHHHhcCCccc--eEEEEEEc-CCCcccceEEeccccC---hhHHHHHHHHHHhCcccCeEEEEEEEecCC-------
Confidence 45567899999 9 99999996 3459999999865333 345679999999999999999999998642
Q ss_pred cEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 100 ~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
-+||||||+ |+|.++|+....... ....+..+..||++||+||++ .++|||||...||+|++++.+||+|||+++
T Consensus 275 -piyIVtE~m~~GsLl~yLr~~~~~~l-~~~~Ll~~a~qIaeGM~YLes-~~~IHRDLAARNiLV~~~~~vKIsDFGLAr 351 (468)
T KOG0197|consen 275 -PIYIVTEYMPKGSLLDYLRTREGGLL-NLPQLLDFAAQIAEGMAYLES-KNYIHRDLAARNILVDEDLVVKISDFGLAR 351 (468)
T ss_pred -ceEEEEEecccCcHHHHhhhcCCCcc-chHHHHHHHHHHHHHHHHHHh-CCccchhhhhhheeeccCceEEEccccccc
Confidence 599999999 789999998332222 223345569999999999996 999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhh----h------
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE----L------ 246 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~----l------ 246 (778)
...++.... ......+..|.|||.+..+ .++.++|+||||++|||||+ |+.|+.... +
T Consensus 352 ~~~d~~Y~~-----~~~~kfPIkWtAPEa~~~~------~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~G 420 (468)
T KOG0197|consen 352 LIGDDEYTA-----SEGGKFPIKWTAPEALNYG------KFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERG 420 (468)
T ss_pred ccCCCceee-----cCCCCCCceecCHHHHhhC------CcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhcc
Confidence 655432111 1122334489999999873 67889999999999999999 555554321 1
Q ss_pred ---hccCCCCcchHHHHHHHhccCCCCCCChHHHHh
Q 004025 247 ---RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 247 ---~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
.....+|..+.++++.|+..+|+.|||++.+..
T Consensus 421 yRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~ 456 (468)
T KOG0197|consen 421 YRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLRE 456 (468)
T ss_pred CcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHH
Confidence 123568899999999999999999999986653
|
|
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-30 Score=271.29 Aligned_cols=238 Identities=21% Similarity=0.260 Sum_probs=193.3
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.+|.|. | .||.++.+.+++.|++|.+............+.+|+.+|++++||||++++++++.+
T Consensus 1 ~y~~~~~ig~g~~g--~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~------- 71 (256)
T cd08221 1 HYIPIRVLGKGAFG--EATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDD------- 71 (256)
T ss_pred CceEeeEecccCCc--eEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecC-------
Confidence 589999999998 7 788888889999999999987655555566788999999999999999999999864
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|++|||| ++|.+++..... .......+..++.|++.+|.|||+ .+++||||+|+||+++.++.+||+|||++
T Consensus 72 -~~~~~~~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~-~~i~h~dl~p~ni~~~~~~~~kl~d~~~~ 148 (256)
T cd08221 72 -NTLLIEMEYANGGTLYDKIVRQKG-QLFEEEMVLWYLFQIVSAVSYIHK-AGILHRDIKTLNIFLTKAGLIKLGDFGIS 148 (256)
T ss_pred -CeEEEEEEecCCCcHHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCChHhEEEeCCCCEEECcCcce
Confidence 3899999999 579998876531 122344566779999999999995 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc--------
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN-------- 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~-------- 248 (778)
......... .....++..|+|||+..+ ..++.++|+|||||++|||++|..+|.......
T Consensus 149 ~~~~~~~~~------~~~~~~~~~y~ape~~~~------~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~ 216 (256)
T cd08221 149 KILGSEYSM------AETVVGTPYYMSPELCQG------VKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQG 216 (256)
T ss_pred EEccccccc------ccccCCCccccCHhhcCC------CCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC
Confidence 876543210 111234568999999876 245678999999999999999998876432111
Q ss_pred -----cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -----~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++.+||..+|..||++.++++++
T Consensus 217 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 217 NYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred CCCCCccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 123566788999999999999999999999987
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-30 Score=281.98 Aligned_cols=241 Identities=15% Similarity=0.150 Sum_probs=182.5
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECC----------------CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCC
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKD----------------DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHP 79 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~----------------~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHP 79 (778)
+..+|.+.++||.|+ | .||.|+.+. ++..|+||++.... .......+.+|+++|++++||
T Consensus 3 ~~~~~~~~~~lg~G~fg--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~ 79 (304)
T cd05096 3 PRGHLLFKEKLGEGQFG--EVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA-NKNARNDFLKEVKILSRLKDP 79 (304)
T ss_pred chhhCeeeeEecccCCe--EEEEEEeccCcccccccccccccCCcceEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCC
Confidence 456799999999998 8 899997532 34479999987543 233456688999999999999
Q ss_pred CeeeEeeeeEecccccCCcccEEEEEecCC--cChHHHHHHhCcCCC----------------cchHHHHHHHHHHHHHH
Q 004025 80 NILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGS----------------QRDEYYAWGLNQIAKAV 141 (778)
Q Consensus 80 nIlk~~d~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~----------------~~~~~i~~gl~QI~~aL 141 (778)
||+++++++..++ .+||||||+ ++|.+++........ .....+..++.||+.||
T Consensus 80 niv~~~~~~~~~~--------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al 151 (304)
T cd05096 80 NIIRLLGVCVDED--------PLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGM 151 (304)
T ss_pred CeeEEEEEEecCC--------ceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 9999999998643 789999999 579998876432111 11233556699999999
Q ss_pred HHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCc
Q 004025 142 SFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWS 221 (778)
Q Consensus 142 ~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~ 221 (778)
.|||+ .+++||||||+||+++.+|.+||+|||+++.+...... ........+..|+|||++.++ .++.+
T Consensus 152 ~~lH~-~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~------~~~~~ 220 (304)
T cd05096 152 KYLSS-LNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYY----RIQGRAVLPIRWMAWECILMG------KFTTA 220 (304)
T ss_pred HHHHH-CCccccCcchhheEEcCCccEEECCCccceecccCcee----EecCcCCCCccccCHHHHhcC------CCCch
Confidence 99995 89999999999999999999999999999866432110 000111224579999998753 46779
Q ss_pred chhHHHHHHHHHHHhC--CCCCCh---hhh--------h---------ccCCCCcchHHHHHHHhccCCCCCCChHHHHh
Q 004025 222 IDSWGLGCLIYELFSG--MRLSKT---EEL--------R---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 222 ~DiwSLG~liyel~tg--~~p~~~---~~l--------~---------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
+|+|||||++|||+++ ..|+.. .+. . ....+|..+.+++.+||..+|.+||++.++.+
T Consensus 221 ~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~ 300 (304)
T cd05096 221 SDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHA 300 (304)
T ss_pred hhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence 9999999999999874 445432 110 0 01245778999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=278.02 Aligned_cols=230 Identities=18% Similarity=0.202 Sum_probs=178.2
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEEE
Q 004025 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104 (778)
Q Consensus 27 lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~lyI 104 (778)
||.|+ | +||+++.+.+|+.|++|.+..+.... .....+..|+.+++.++||||+++++.++.+ .++|+
T Consensus 1 lg~G~~g--~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~--------~~~~l 70 (277)
T cd05607 1 LGKGGFG--EVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESK--------THLCL 70 (277)
T ss_pred CCCCCce--EEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecC--------CeEEE
Confidence 46676 7 89999999999999999997543221 2234456799999999999999999999864 48999
Q ss_pred EecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCCC
Q 004025 105 VTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGN 182 (778)
Q Consensus 105 VtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~ 182 (778)
||||+ ++|..++....... .....+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||++......
T Consensus 71 v~e~~~g~~L~~~~~~~~~~~-~~~~~~~~~~~qi~~al~~lH~-~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~ 148 (277)
T cd05607 71 VMSLMNGGDLKYHIYNVGERG-LEMERVIHYSAQITCGILHLHS-MDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG 148 (277)
T ss_pred EEecCCCCCHHHHHHhccccC-CCHHHHHHHHHHHHHHHHHHHH-CCEEEccCChHhEEEcCCCCEEEeeceeeeecCCC
Confidence 99999 47888776544222 2233345568999999999995 99999999999999999999999999998776542
Q ss_pred CCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh-------hh-hc------
Q 004025 183 NEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-------EL-RN------ 248 (778)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~-------~l-~~------ 248 (778)
.. .....++..|+|||++.+. .++.++|+|||||++|||++|..||... .+ ..
T Consensus 149 ~~-------~~~~~~~~~y~aPE~~~~~------~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 215 (277)
T cd05607 149 KT-------ITQRAGTNGYMAPEILKEE------PYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEV 215 (277)
T ss_pred ce-------eeccCCCCCccCHHHHccC------CCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccc
Confidence 11 1112345589999998763 4778999999999999999999887531 11 00
Q ss_pred ---cCCCCcchHHHHHHHhccCCCCCCChH----HHHhcc
Q 004025 249 ---TASIPKSLLPDYQRLLSSMPSRRLNSS----KLIENS 281 (778)
Q Consensus 249 ---~~~iP~~L~~~i~~lL~~dP~~Rps~~----~lL~~~ 281 (778)
...++..+.+++.+||+.||.+||++. +++.|+
T Consensus 216 ~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~ 255 (277)
T cd05607 216 KFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHE 255 (277)
T ss_pred ccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcCh
Confidence 124677789999999999999999994 555665
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8e-31 Score=293.88 Aligned_cols=233 Identities=15% Similarity=0.210 Sum_probs=183.5
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECC--CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKD--DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~--~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
...|++.+.||.|+ | +||.|..+. ++..|+||.+... ....+|+++|++|+||||+++++.+..+
T Consensus 91 ~~~y~i~~~Lg~G~~g--~Vy~~~~~~~~~~~~v~vK~~~~~-------~~~~~E~~il~~l~h~~iv~~~~~~~~~--- 158 (392)
T PHA03207 91 RMQYNILSSLTPGSEG--EVFVCTKHGDEQRKKVIVKAVTGG-------KTPGREIDILKTISHRAIINLIHAYRWK--- 158 (392)
T ss_pred cCceEEEEeecCCCCe--EEEEEEEcCCccceeEEEEecccc-------ccHHHHHHHHHhcCCCCccceeeeEeeC---
Confidence 45699999999998 8 899998653 4578999987643 1345899999999999999999999864
Q ss_pred cCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 95 ATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 95 g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..+|+|||++ ++|..++..... .....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+||
T Consensus 159 -----~~~~lv~e~~~~~l~~~l~~~~~---l~~~~~~~i~~ql~~aL~~LH~-~givHrDlkp~Nill~~~~~~~l~Df 229 (392)
T PHA03207 159 -----STVCMVMPKYKCDLFTYVDRSGP---LPLEQAITIQRRLLEALAYLHG-RGIIHRDVKTENIFLDEPENAVLGDF 229 (392)
T ss_pred -----CEEEEEehhcCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEEcCCCCEEEccC
Confidence 3899999999 578888854332 2334466679999999999995 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------- 246 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l------- 246 (778)
|++..+..... ....+.+.++..|+|||++.+ ..++.++|+|||||++|||++|+.||.....
T Consensus 230 G~a~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l 299 (392)
T PHA03207 230 GAACKLDAHPD----TPQCYGWSGTLETNSPELLAL------DPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQL 299 (392)
T ss_pred ccccccCcccc----cccccccccccCccCHhHhcC------CCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHH
Confidence 99877654221 111223455679999999876 3567899999999999999999877743210
Q ss_pred hc---------------------------------c---------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 RN---------------------------------T---------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ~~---------------------------------~---------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. . ..++..+..++++||..+|.+||++.+++.|+
T Consensus 300 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p 376 (392)
T PHA03207 300 RSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLP 376 (392)
T ss_pred HHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 00 0 12244566789999999999999999999998
|
|
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=275.51 Aligned_cols=241 Identities=16% Similarity=0.254 Sum_probs=190.3
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc--------hhHHHHHHHHHHHHhcCCCCCeeeEeeeeE
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ--------DGHLAAARNGVKRLRTVRHPNILAFLHSTE 89 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~--------~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e 89 (778)
|+|.+.+.+|.|+ | .||+|.++.+|+.|+||.+...... ....+.+.+|+.+++.++||||++++++++
T Consensus 1 ~~~~~~~~lg~g~~~--~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 78 (272)
T cd06629 1 FKWVKGELIGKGTYG--RVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFET 78 (272)
T ss_pred CceeecceecccCce--EEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEec
Confidence 6799999999998 7 9999999999999999998643211 123456889999999999999999999987
Q ss_pred ecccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCc
Q 004025 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD 167 (778)
Q Consensus 90 ~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~ 167 (778)
.. ..+|+||||+ ++|.+++...+. .....+..++.||+.||.|||+ .+++||||+|+||+++.+|.
T Consensus 79 ~~--------~~~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~~~nil~~~~~~ 146 (272)
T cd06629 79 TE--------EYLSIFLEYVPGGSIGSCLRTYGR---FEEQLVRFFTEQVLEGLAYLHS-KGILHRDLKADNLLVDADGI 146 (272)
T ss_pred cC--------CceEEEEecCCCCcHHHHHhhccC---CCHHHHHHHHHHHHHHHHHHhh-CCeeecCCChhhEEEcCCCe
Confidence 63 4899999999 579998877532 2334566679999999999995 89999999999999999999
Q ss_pred EEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-
Q 004025 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL- 246 (778)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l- 246 (778)
+||+|||++........ ........+...|++||++.+.. ..++.++|+||||+++|++++|..|+.....
T Consensus 147 ~~l~d~~~~~~~~~~~~----~~~~~~~~~~~~y~~PE~~~~~~----~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~ 218 (272)
T cd06629 147 CKISDFGISKKSDDIYD----NDQNMSMQGSVFWMAPEVIHSYS----QGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI 218 (272)
T ss_pred EEEeecccccccccccc----ccccccccCCccccCHHHhcccc----CCCCccchhHHHHHHHHHHHhCCCCCcCcchH
Confidence 99999999876543211 00011122345899999987531 2367889999999999999999988753211
Q ss_pred ---hc--------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 ---RN--------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ---~~--------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. ...++..+.+++.+||..+|..||++.++++|+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~ 270 (272)
T cd06629 219 AAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHP 270 (272)
T ss_pred HHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCC
Confidence 00 124577789999999999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=282.30 Aligned_cols=244 Identities=16% Similarity=0.217 Sum_probs=191.9
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.+|.|. | +||.|++..++..|+||.+....... .....+.+|++.|+.++||||+++++.++..
T Consensus 2 ~y~~~~~ig~g~~g--~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------ 73 (316)
T cd05574 2 HFKKIKLLGKGDVG--RVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTE------ 73 (316)
T ss_pred ceEEeeeecCCccE--EEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecC------
Confidence 699999999998 7 89999999999999999998754332 3566788999999999999999999999763
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+|+||||+ ++|.+++..... .......+..++.||+.||.|||+ .+++||||||+||+++.+|.++|+|||+
T Consensus 74 --~~~~lv~e~~~~~~L~~~~~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nili~~~~~~~l~dfg~ 149 (316)
T cd05574 74 --TYLCLVMDYCPGGELFRLLQRQPG-KCLSEEVARFYAAEVLLALEYLHL-LGIVYRDLKPENILLHESGHIMLSDFDL 149 (316)
T ss_pred --CEEEEEEEecCCCCHHHHHHhCCC-CccCHHHHHHHHHHHHHHHHHHHH-CCeeccCCChHHeEEcCCCCEEEeecch
Confidence 4899999999 579988875432 122334456678999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCC-----------------------CccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHH
Q 004025 176 LSEFDGNNEAANG-----------------------PMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIY 232 (778)
Q Consensus 176 a~~~~~~~~~~~~-----------------------~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liy 232 (778)
+............ ........++..|+|||++.+. .++.++|+|||||++|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~------~~~~~~Di~slG~ll~ 223 (316)
T cd05574 150 SKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGD------GHGSAVDWWTLGILLY 223 (316)
T ss_pred hhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCC------CCCchHHHHHHHHHHH
Confidence 8765432111000 0000112334579999998763 4677899999999999
Q ss_pred HHHhCCCCCChhh----hhc----------cCCCCcchHHHHHHHhccCCCCCCC----hHHHHhcc
Q 004025 233 ELFSGMRLSKTEE----LRN----------TASIPKSLLPDYQRLLSSMPSRRLN----SSKLIENS 281 (778)
Q Consensus 233 el~tg~~p~~~~~----l~~----------~~~iP~~L~~~i~~lL~~dP~~Rps----~~~lL~~~ 281 (778)
+|++|..||.... +.. ...+|..+.+++++||..+|.+||+ +.++++|+
T Consensus 224 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~ 290 (316)
T cd05574 224 EMLYGTTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHP 290 (316)
T ss_pred HHhhCCCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCc
Confidence 9999998875321 110 1225777999999999999999999 99999998
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-30 Score=275.86 Aligned_cols=240 Identities=15% Similarity=0.195 Sum_probs=190.5
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|++.+.||.|. | .||.|++..+++.|+||++..... .....+.+|+..++.++||||+++++.+...
T Consensus 7 ~~~~~~~~~~lg~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~---- 78 (267)
T cd06645 7 PQEDFELIQRIGSGTYG--DVYKARNVNTGELAAIKVIKLEPG--EDFAVVQQEIIMMKDCKHSNIVAYFGSYLRR---- 78 (267)
T ss_pred cHHHHHHHHHhCCCCCe--EEEEEEEcCCCcEEEEEEEecCch--hHHHHHHHHHHHHHhCCCCCeeeEEEEEEeC----
Confidence 456899999999998 7 899999999999999999976432 2345678899999999999999999999864
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..+|+||||+ ++|.+++...+. .....+.+++.||+.||.|||+ .+++|+||||+||+++.+|.+||+||
T Consensus 79 ----~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~nili~~~~~~~l~df 150 (267)
T cd06645 79 ----DKLWICMEFCGGGSLQDIYHVTGP---LSESQIAYVSRETLQGLYYLHS-KGKMHRDIKGANILLTDNGHVKLADF 150 (267)
T ss_pred ----CEEEEEEeccCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECCCCCEEECcc
Confidence 4899999999 479998876542 2345577779999999999995 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----h---
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----L--- 246 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l--- 246 (778)
|++......... .....+...|+|||++... ....++.++|+|||||++|+|++|..|+.... +
T Consensus 151 g~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~---~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~ 221 (267)
T cd06645 151 GVSAQITATIAK------RKSFIGTPYWMAPEVAAVE---RKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLM 221 (267)
T ss_pred eeeeEccCcccc------cccccCcccccChhhhccc---cCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhh
Confidence 998766432110 1112344589999987421 01346679999999999999999988763211 0
Q ss_pred ----------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 ----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ----------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....+|..+.+++.+||..+|.+||++.++++|+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~ 266 (267)
T cd06645 222 TKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHP 266 (267)
T ss_pred hccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCC
Confidence 00123556788899999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-31 Score=289.82 Aligned_cols=230 Identities=16% Similarity=0.194 Sum_probs=177.8
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHH-HHhcCCCCCeeeEeeeeEecccccCCcccEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVK-RLRTVRHPNILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~-~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~l 102 (778)
.||.|+ | +||.|+++.+|+.|+||++.++... ......+.+|.. .++.++||||+++++.++.+ ..+
T Consensus 2 ~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~--------~~~ 71 (325)
T cd05604 2 VIGKGSFG--KVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTT--------EKL 71 (325)
T ss_pred ceeeCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecC--------CEE
Confidence 578887 7 9999999999999999999864221 122334445544 57789999999999999864 389
Q ss_pred EEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccC
Q 004025 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (778)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~ 180 (778)
|+||||+ +.|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++....
T Consensus 72 ~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~al~~lH~-~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~ 147 (325)
T cd05604 72 YFVLDFVNGGELFFHLQRERS---FPEPRARFYAAEIASALGYLHS-INIVYRDLKPENILLDSQGHVVLTDFGLCKEGI 147 (325)
T ss_pred EEEEcCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCHHHeEECCCCCEEEeecCCcccCC
Confidence 9999999 468887765432 2344566779999999999995 899999999999999999999999999987543
Q ss_pred CCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc------------
Q 004025 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------------ 248 (778)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~------------ 248 (778)
.... ......++..|+|||++.+ ..++.++|+|||||++|||++|.+||.......
T Consensus 148 ~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~ 215 (325)
T cd05604 148 AQSD------TTTTFCGTPEYLAPEVIRK------QPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVL 215 (325)
T ss_pred CCCC------CcccccCChhhCCHHHHcC------CCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccC
Confidence 2111 0112234568999999876 356779999999999999999999886432111
Q ss_pred cCCCCcchHHHHHHHhccCCCCCCCh----HHHHhcc
Q 004025 249 TASIPKSLLPDYQRLLSSMPSRRLNS----SKLIENS 281 (778)
Q Consensus 249 ~~~iP~~L~~~i~~lL~~dP~~Rps~----~~lL~~~ 281 (778)
...++..+.+++++||..+|.+|++. .++++|+
T Consensus 216 ~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~ 252 (325)
T cd05604 216 RPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHP 252 (325)
T ss_pred CCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCC
Confidence 12456677889999999999999976 5888887
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=278.92 Aligned_cols=245 Identities=16% Similarity=0.220 Sum_probs=191.0
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.+|.|. | +||+|+++.+|+.|+||.+............+.+|+.+++.++ ||||+++++++.....++
T Consensus 2 ~y~~~~~lg~g~~g--~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~-- 77 (295)
T cd07837 2 AYEKLEKIGEGTYG--KVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNG-- 77 (295)
T ss_pred CceEeeEecccCCe--EEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCC--
Confidence 699999999998 8 8999999999999999998765433334456788999999996 699999999987654211
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcC--CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC-CCcEEEEec
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLE--GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ-TLDWKLHAF 173 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~--~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~-~g~~KL~dF 173 (778)
...+|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++||||+|+||+++. ++.+||+||
T Consensus 78 -~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~-~~i~H~dl~~~nil~~~~~~~~kl~df 155 (295)
T cd07837 78 -KPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHK-HGVMHRDLKPQNLLVDKQKGLLKIADL 155 (295)
T ss_pred -CceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCChHHEEEecCCCeEEEeec
Confidence 23589999999 5788887654322 223445566779999999999995 89999999999999998 899999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-hh-----
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-LR----- 247 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-l~----- 247 (778)
|++..+...... .........|+|||.+.+. ..++.++|+|||||++|+|++|.+||.... ..
T Consensus 156 g~~~~~~~~~~~------~~~~~~~~~~~aPE~~~~~-----~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~ 224 (295)
T cd07837 156 GLGRAFSIPVKS------YTHEIVTLWYRAPEVLLGS-----THYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHI 224 (295)
T ss_pred ccceecCCCccc------cCCcccccCCCChHHhhCC-----CCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence 998765432110 0111234579999987653 345778999999999999999998874311 00
Q ss_pred ----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ----------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++.+||..||.+||++.+++.|+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~ 292 (295)
T cd07837 225 FKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHP 292 (295)
T ss_pred HHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCC
Confidence 0124667788999999999999999999999998
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=279.22 Aligned_cols=239 Identities=16% Similarity=0.262 Sum_probs=187.3
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.||.|. | +||+|+++.+|+.|+||.+......+.....+.+|++++++++||||+++++++...
T Consensus 3 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 73 (294)
T PLN00009 3 QYEKVEKIGEGTYG--VVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSE------- 73 (294)
T ss_pred ceEEEEEecCCCCE--EEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecC-------
Confidence 699999999987 7 999999999999999999876544444456788999999999999999999999863
Q ss_pred ccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC-CCcEEEEecccc
Q 004025 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ-TLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~-~g~~KL~dFgla 176 (778)
.+.|+||||+ ++|..++...... ......+..++.||+.||.|||+ .+++|+||+|+||+++. ++.+||+|||++
T Consensus 74 -~~~~lv~e~~~~~l~~~~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~-~~i~H~dl~p~nill~~~~~~~kl~dfg~~ 150 (294)
T PLN00009 74 -KRLYLVFEYLDLDLKKHMDSSPDF-AKNPRLIKTYLYQILRGIAYCHS-HRVLHRDLKPQNLLIDRRTNALKLADFGLA 150 (294)
T ss_pred -CeEEEEEecccccHHHHHHhCCCC-CcCHHHHHHHHHHHHHHHHHHHh-CCeeCCCCCcceEEEECCCCEEEEcccccc
Confidence 4899999999 5677777654322 12334455668999999999995 89999999999999985 567999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hh-----
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LR----- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~----- 247 (778)
......... .....+...|+|||++.+. ..++.++|+|||||++|+|++|.++|.... +.
T Consensus 151 ~~~~~~~~~------~~~~~~~~~y~~PE~~~~~-----~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~ 219 (294)
T PLN00009 151 RAFGIPVRT------FTHEVVTLWYRAPEILLGS-----RHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRI 219 (294)
T ss_pred cccCCCccc------cccCceeecccCHHHHhCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 765432110 0111234579999987653 345678999999999999999998874321 00
Q ss_pred --------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 --------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 --------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++.+||+.+|.+||++.++++|+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~ 285 (294)
T PLN00009 220 LGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHE 285 (294)
T ss_pred hCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 0123566778899999999999999999999997
|
|
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=281.19 Aligned_cols=251 Identities=16% Similarity=0.255 Sum_probs=189.3
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+++|.|+ | .||+|+++.+++.|+||.+......+.....+.+|++.+++++||||+++++++......+..
T Consensus 12 ~~y~~~~~lg~g~~~--~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 12 SKYEKLAKIGQGTFG--EVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hheEEEEEeecCCCE--EEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 3699999999997 7 999999999999999999876543333344567899999999999999999998764321111
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
....+|+||||+ +.|..++..... ......+..++.||+.||.|||+ .+++|+||+|+||+++.+|.+||+|||++
T Consensus 90 ~~~~~~lv~e~~~~~l~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~-~~i~H~dl~p~nil~~~~~~~kl~dfg~~ 166 (310)
T cd07865 90 YKGSFYLVFEFCEHDLAGLLSNKNV--KFTLSEIKKVMKMLLNGLYYIHR-NKILHRDMKAANILITKDGILKLADFGLA 166 (310)
T ss_pred CCceEEEEEcCCCcCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHEEECCCCcEEECcCCCc
Confidence 234789999999 467777765431 12344567779999999999995 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh-------c-
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------N- 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~-------~- 248 (778)
..+......... ......+...|+|||++.+. ..++.++|+|||||++|||++|.++|...... .
T Consensus 167 ~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~ 239 (310)
T cd07865 167 RAFSLSKNSKPN--RYTNRVVTLWYRPPELLLGE-----RDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQL 239 (310)
T ss_pred ccccCCcccCCC--CccCcccCccccCcHHhcCC-----cccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 876543211100 01112334589999987653 23567899999999999999998877532110 0
Q ss_pred cC-------------------C-----------------CCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 TA-------------------S-----------------IPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ~~-------------------~-----------------iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. . ....+.+++.+||..||.+||+++++++|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~ 308 (310)
T cd07865 240 CGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHD 308 (310)
T ss_pred hCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCC
Confidence 00 0 123356789999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.6e-31 Score=280.09 Aligned_cols=238 Identities=14% Similarity=0.047 Sum_probs=181.3
Q ss_pred Cceec--cCCCCCCCceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 20 PYNIG--DPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 20 ~Y~i~--~~lg~g~g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
++++. ..++.|+ ...||+|+. +|+.|+||.+....... ...+.+.+|+.+|++++||||+++++++.+...+
T Consensus 19 ~i~~~~~~~i~~g~-~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~-- 93 (283)
T PHA02988 19 DIDKYTSVLIKEND-QNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDD-- 93 (283)
T ss_pred HcCCCCCeEEeeCC-ceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccC--
Confidence 34444 3345554 338999998 68999999997643322 3357788999999999999999999998751111
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..++|+||||+ ++|.+++....... ......++.|++.||.|||+..+++||||||+||+++.+|.+||+|||
T Consensus 94 --~~~~~lv~Ey~~~g~L~~~l~~~~~~~---~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg 168 (283)
T PHA02988 94 --LPRLSLILEYCTRGYLREVLDKEKDLS---FKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHG 168 (283)
T ss_pred --CCceEEEEEeCCCCcHHHHHhhCCCCC---hhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccc
Confidence 34799999999 46999997654221 222334589999999999964689999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------ 248 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~------ 248 (778)
++..+.... ....++..|+|||++.+.. ..++.++|+|||||++|||++|..||.......
T Consensus 169 ~~~~~~~~~---------~~~~~~~~y~aPE~~~~~~----~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~ 235 (283)
T PHA02988 169 LEKILSSPP---------FKNVNFMVYFSYKMLNDIF----SEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLII 235 (283)
T ss_pred hHhhhcccc---------ccccCcccccCHHHhhhcc----ccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 988654321 1123445899999986521 356789999999999999999999986432110
Q ss_pred -------c-CCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 249 -------T-ASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 249 -------~-~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. ..+|..+.+++.+||+.||..||++.++++.
T Consensus 236 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 275 (283)
T PHA02988 236 NKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYN 275 (283)
T ss_pred hcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 0 1456778999999999999999999999875
|
|
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=277.38 Aligned_cols=238 Identities=17% Similarity=0.284 Sum_probs=188.3
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~ 99 (778)
|++.+.+|.|. | .||+|+++.+|..|+||++............+.+|++.++.++||||+++++.+...
T Consensus 1 y~~~~~l~~g~~~--~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~-------- 70 (283)
T cd07835 1 YQKVEKIGEGTYG--VVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSE-------- 70 (283)
T ss_pred CchheEecCCCCe--EEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccC--------
Confidence 77888999987 7 899999999999999999986544444455688999999999999999999998763
Q ss_pred cEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccc
Q 004025 100 ITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (778)
Q Consensus 100 ~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~ 178 (778)
...|++|||+ .+|..++...... ......+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++..
T Consensus 71 ~~~~iv~e~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~i~~~L~~lH~-~~~~H~dl~p~nil~~~~~~~~l~df~~~~~ 148 (283)
T cd07835 71 NKLYLVFEFLDLDLKKYMDSSPLT-GLDPPLIKSYLYQLLQGIAYCHS-HRVLHRDLKPQNLLIDREGALKLADFGLARA 148 (283)
T ss_pred CeEEEEEeccCcCHHHHHhhCCCC-CCCHHHHHHHHHHHHHHHHHHHH-CCeeCCCCCHHHEEEcCCCcEEEeecccccc
Confidence 4899999999 5788888765421 12344456679999999999995 8999999999999999999999999999876
Q ss_pred cCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh------------
Q 004025 179 FDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------------ 246 (778)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l------------ 246 (778)
....... .........|+|||++.+. ..++.++|+|||||++|+|++|.+||.....
T Consensus 149 ~~~~~~~------~~~~~~~~~~~aPE~~~~~-----~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~ 217 (283)
T cd07835 149 FGVPVRT------YTHEVVTLWYRAPEILLGS-----RQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLG 217 (283)
T ss_pred cCCCccc------cCccccccCCCCCceeecC-----cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 5432110 0011234579999987653 2356789999999999999999988742210
Q ss_pred -----------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 -----------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 -----------------------------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....++..+.+++.+||+.+|.+||++.++++|+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~ 281 (283)
T cd07835 218 TPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHP 281 (283)
T ss_pred CCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCC
Confidence 00124556788899999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=279.17 Aligned_cols=233 Identities=18% Similarity=0.242 Sum_probs=190.2
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.||.|+ | .||.+.++.+++.|+||++...... ....+.+.+|++.++++.||||+++++++...
T Consensus 2 ~y~~~~~ig~g~~~--~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 73 (290)
T cd05580 2 DFEFIKTLGTGSFG--RVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDD------ 73 (290)
T ss_pred ceEEEEEeecCCCe--EEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcC------
Confidence 699999999997 6 9999999999999999999754322 23456788999999999999999999999863
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++|+||+|.||+|+.+|.+||+|||+
T Consensus 74 --~~~~~v~e~~~~~~L~~~~~~~~~---l~~~~~~~~~~qil~~l~~lH~-~~i~H~dl~p~nili~~~~~~kl~dfg~ 147 (290)
T cd05580 74 --SNLYLVMEYVPGGELFSHLRKSGR---FPEPVARFYAAQVVLALEYLHS-LDIVYRDLKPENLLLDSDGYIKITDFGF 147 (290)
T ss_pred --CeEEEEEecCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCEecCCCCHHHEEECCCCCEEEeeCCC
Confidence 4899999999 479998877542 2344466679999999999995 9999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----hc---
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN--- 248 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~~--- 248 (778)
+...... .....++..|++||.+.+ ...+.++|+||||+++|+|++|..||..... ..
T Consensus 148 ~~~~~~~---------~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 212 (290)
T cd05580 148 AKRVKGR---------TYTLCGTPEYLAPEIILS------KGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILE 212 (290)
T ss_pred ccccCCC---------CCCCCCCccccChhhhcC------CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Confidence 8876542 111234458999999865 3456789999999999999999988754321 11
Q ss_pred -----cCCCCcchHHHHHHHhccCCCCCC-----ChHHHHhcc
Q 004025 249 -----TASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENS 281 (778)
Q Consensus 249 -----~~~iP~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~ 281 (778)
...++..+.+++++||..+|.+|+ ++.++++|+
T Consensus 213 ~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~ 255 (290)
T cd05580 213 GKVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHP 255 (290)
T ss_pred CCccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCc
Confidence 123456788999999999999999 889999997
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-30 Score=271.11 Aligned_cols=235 Identities=17% Similarity=0.207 Sum_probs=190.3
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
...|++.+.++.|. | .||+|+.+.++..|++|.+.... ..+.+.+|++.++.++||||+++++.+..+
T Consensus 2 ~~~y~~~~~i~~g~~~--~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~----- 70 (256)
T cd06612 2 EEVFDILEKLGEGSYG--SVYKAIHKETGQVVAIKVVPVEE----DLQEIIKEISILKQCDSPYIVKYYGSYFKN----- 70 (256)
T ss_pred cccchhhhhhcCCCCe--EEEEEEEcCCCcEEEEEEeecHH----HHHHHHHHHHHHHhCCCCcEeeeeeeeecC-----
Confidence 45799999999997 7 89999999889999999997532 156789999999999999999999999864
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+|+++||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||
T Consensus 71 ---~~~~l~~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~~l~~~l~~lh~-~~i~H~dl~~~ni~~~~~~~~~l~dfg 144 (256)
T cd06612 71 ---TDLWIVMEYCGAGSVSDIMKITNK--TLTEEEIAAILYQTLKGLEYLHS-NKKIHRDIKAGNILLNEEGQAKLADFG 144 (256)
T ss_pred ---CcEEEEEecCCCCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCcceEEECCCCcEEEcccc
Confidence 4899999999 479988865432 12344566779999999999995 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh-------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------- 247 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------- 247 (778)
++......... .....+...|++||++.+ ..++.++|+|||||++|+|++|.+|+......
T Consensus 145 ~~~~~~~~~~~------~~~~~~~~~y~~PE~~~~------~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~ 212 (256)
T cd06612 145 VSGQLTDTMAK------RNTVIGTPFWMAPEVIQE------IGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIP 212 (256)
T ss_pred cchhcccCccc------cccccCCccccCHHHHhc------CCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhc
Confidence 98876543211 111123458999999876 35677899999999999999999887532110
Q ss_pred --------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 --------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 --------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++.+|+..+|..||++.++++|+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~ 254 (256)
T cd06612 213 NKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHP 254 (256)
T ss_pred cCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCC
Confidence 0123456788899999999999999999999997
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.9e-31 Score=279.27 Aligned_cols=237 Identities=20% Similarity=0.261 Sum_probs=187.9
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.+|.|+ | .||+|.++.+++.|+||.+..........+.+.+|+++++.++||||++++++++.+
T Consensus 2 ~y~~~~~lg~g~~~--~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 72 (286)
T cd07846 2 KYENLGLVGEGSYG--MVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRK------- 72 (286)
T ss_pred ceeEeeeeccCCCe--EEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccC-------
Confidence 699999999998 8 899999999999999999876544444456788999999999999999999999763
Q ss_pred ccEEEEEecCCc--ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|+|+||+. .|..+...... .....+..++.||+.||.|||+ .+++||||+|+||++++++.+||+|||++
T Consensus 73 -~~~~lv~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~i~~~l~~LH~-~~i~h~~l~p~ni~~~~~~~~~l~dfg~~ 147 (286)
T cd07846 73 -KRLYLVFEFVDHTVLDDLEKYPNG---LDESRVRKYLFQILRGIEFCHS-HNIIHRDIKPENILVSQSGVVKLCDFGFA 147 (286)
T ss_pred -CeEEEEEecCCccHHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEECCCCcEEEEeeeee
Confidence 48999999993 45555443221 2344566679999999999995 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----------
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---------- 246 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l---------- 246 (778)
..+...... .....+...|++||++.+. ..++.++|+|||||++|||++|.++|.....
T Consensus 148 ~~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~ 216 (286)
T cd07846 148 RTLAAPGEV------YTDYVATRWYRAPELLVGD-----TKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKC 216 (286)
T ss_pred eeccCCccc------cCcccceeeccCcHHhccc-----cccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHH
Confidence 876543211 1112344589999998653 2456789999999999999999887742210
Q ss_pred ---------------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 ---------------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ---------------------------------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....++..+.+++++||..+|.+||++.++++|+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~ 284 (286)
T cd07846 217 LGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHE 284 (286)
T ss_pred hCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCC
Confidence 00124566788999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-30 Score=270.43 Aligned_cols=237 Identities=21% Similarity=0.230 Sum_probs=191.3
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.+|.|. | .||.+..+.+++.|+||.+............+.+|+++|+.++||||+++++.++.+
T Consensus 1 ~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------- 71 (256)
T cd08220 1 KYEKIRVVGRGAFG--IVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLED------- 71 (256)
T ss_pred CceEEEEecccCce--EEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecC-------
Confidence 589999999997 6 899999999999999999987654545567889999999999999999999998753
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC-cEEEEeccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-DWKLHAFDV 175 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g-~~KL~dFgl 175 (778)
..+|+||||+ ++|.+++....... .....+..++.|++.+|.|||+ ++++|+||+|+||+++.++ .+||+|||+
T Consensus 72 -~~~~lv~e~~~~~~L~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~~~nil~~~~~~~~~l~d~~~ 148 (256)
T cd08220 72 -KALMIVMEYAPGGTLAEYIQKRCNSL-LDEDTILHFFVQILLALHHVHT-KLILHRDLKTQNILLDKHKMVVKIGDFGI 148 (256)
T ss_pred -CEEEEEEecCCCCCHHHHHHHhcccC-CCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCCCEEEEccCCC
Confidence 4899999999 47999987653221 2334455668999999999995 9999999999999998654 579999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh--------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~-------- 247 (778)
+........ .....+...|+|||.+.+ ..++.++|+||||+++|+|++|..+|......
T Consensus 149 ~~~~~~~~~-------~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~ 215 (256)
T cd08220 149 SKILSSKSK-------AYTVVGTPCYISPELCEG------KPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMS 215 (256)
T ss_pred ceecCCCcc-------ccccccCCcccCchhccC------CCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHh
Confidence 987654211 111234458999999876 35667899999999999999999887643211
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -----~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++.+||..+|.+||++.++++|+
T Consensus 216 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p 254 (256)
T cd08220 216 GTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQP 254 (256)
T ss_pred cCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCC
Confidence 0123567789999999999999999999999998
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=276.73 Aligned_cols=241 Identities=17% Similarity=0.235 Sum_probs=187.1
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCC-----CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDG-----SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g-----~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~ 92 (778)
.+|++.+.||.|+ | .||.|.....+ ..|++|.+.... .......+.+|++.++.++||||+++++++..+
T Consensus 5 ~~~~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~~v~~K~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~- 80 (283)
T cd05048 5 SAVRFLEELGEGAFG--KVYKGELTGPNERLSATSVAIKTLKENA-EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKE- 80 (283)
T ss_pred HHcchhhcccCccCC--cEEEEEEecCCCCcceeeEEEEecccCC-CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCC-
Confidence 3699999999998 8 89999976555 679999987543 233456788999999999999999999998763
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcC-------------CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCC
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLE-------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCL 157 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~-------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp 157 (778)
..+|++|||+ ++|.+++...... .......+..++.||+.||.|||+ .+++||||||
T Consensus 81 -------~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~-~~i~H~dlkp 152 (283)
T cd05048 81 -------QPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSS-HHFVHRDLAA 152 (283)
T ss_pred -------CceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh-CCeecccccc
Confidence 3789999999 5799998765321 112234466779999999999995 8999999999
Q ss_pred CCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-
Q 004025 158 SSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS- 236 (778)
Q Consensus 158 ~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t- 236 (778)
+||+++.++.+||+|||++......... ........+..|+|||.+.+. .++.++|+|||||++|||++
T Consensus 153 ~Nil~~~~~~~~L~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~------~~~~~sDv~slG~il~el~~~ 222 (283)
T cd05048 153 RNCLVGEGLTVKISDFGLSRDIYSADYY----RVQSKSLLPVRWMPPEAILYG------KFTTESDIWSFGVVLWEIFSY 222 (283)
T ss_pred ceEEEcCCCcEEECCCcceeeccccccc----cccCCCcccccccCHHHhccC------cCchhhhHHHHHHHHHHHHcC
Confidence 9999999999999999998765432110 001112334579999988653 56778999999999999997
Q ss_pred CCCCCChh---hh----hc------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 237 GMRLSKTE---EL----RN------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 237 g~~p~~~~---~l----~~------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
|..||... .+ .. ...+|..+.+++.+||+.+|.+||++.+++++-
T Consensus 223 g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l 280 (283)
T cd05048 223 GLQPYYGFSNQEVIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRL 280 (283)
T ss_pred CCCCCCCCCHHHHHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 87776431 11 10 134677899999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=271.92 Aligned_cols=240 Identities=18% Similarity=0.220 Sum_probs=189.9
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
..+|++.+.++.|. | .||.|.++.+++.++||++...... ....+.+|+.++++++||||+++++.+...
T Consensus 2 ~~~~~~~~~l~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~----- 72 (262)
T cd06613 2 QEDYELIQRIGSGTYG--DVYKARDIATGELVAIKVIKLEPGD--DFEIIQQEISMLKECRHPNIVAYFGSYLRR----- 72 (262)
T ss_pred ccceEEEEEecCCCce--EEEEeEecCCCCEEEEEEEEcCchh--hHHHHHHHHHHHHhCCCCChhceEEEEEeC-----
Confidence 46799999999987 6 9999999999999999999865332 456789999999999999999999998763
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+|++|||+ +.|.+++..... ......+..++.|++.||.|||+ .+++|+||+|+||+++.+|.+||+|||
T Consensus 73 ---~~~~l~~e~~~~~~l~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh~-~~i~h~dl~p~ni~i~~~~~~~l~d~g 146 (262)
T cd06613 73 ---DKLWIVMEYCGGGSLQDIYQVTRG--PLSELQIAYVCRETLKGLAYLHE-TGKIHRDIKGANILLTEDGDVKLADFG 146 (262)
T ss_pred ---CEEEEEEeCCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHh-CCceecCCChhhEEECCCCCEEECccc
Confidence 3899999999 368888876421 12244466779999999999995 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----h----
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----L---- 246 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l---- 246 (778)
++..+....... ........|++||.+.+... ..++.++|+|||||++|+|++|.+|+.... .
T Consensus 147 ~~~~~~~~~~~~------~~~~~~~~y~~Pe~~~~~~~---~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~ 217 (262)
T cd06613 147 VSAQLTATIAKR------KSFIGTPYWMAPEVAAVERK---GGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLIS 217 (262)
T ss_pred cchhhhhhhhcc------ccccCCccccCchhhccccc---CCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 987665321100 11123447999999765210 246678999999999999999998874321 0
Q ss_pred -h--------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 -R--------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 -~--------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ....+|..+.+++++||..+|..||++.+++.|+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~ 261 (262)
T cd06613 218 KSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHP 261 (262)
T ss_pred hccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCC
Confidence 0 0123456688999999999999999999999986
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-30 Score=274.64 Aligned_cols=236 Identities=17% Similarity=0.211 Sum_probs=184.6
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecccccCCc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~g~~~ 98 (778)
|++.+++|.|. | .||+|+++.++..|+||.+.......... ...+|+..++++. ||||+++++++++..
T Consensus 1 y~~~~~lg~g~~~--~v~~~~~~~~~~~~aik~~~~~~~~~~~~-~~~~e~~~l~~l~~h~~i~~~~~~~~~~~------ 71 (282)
T cd07831 1 YKILGKIGEGTFS--EVLKAQSRKTGKYYAIKCMKKHFKSLEQV-NNLREIQALRRLSPHPNILRLIEVLFDRK------ 71 (282)
T ss_pred CceEeeccccccc--eEEEEEEcCCCcEEEEEEehhccCCchhh-hHHHHHHHHhhcCCCCCccceEEEEecCC------
Confidence 78889999988 7 89999999999999999987643322222 3447888898886 999999999998643
Q ss_pred ccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 99 ~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
...+|+||||+ ++|.+.+..... ......+..++.||+.||.|||+ .+++||||+|+||+++. |.+||+|||++.
T Consensus 72 ~~~~~lv~e~~~~~l~~~l~~~~~--~~~~~~~~~~~~qi~~~L~~LH~-~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~ 147 (282)
T cd07831 72 TGRLALVFELMDMNLYELIKGRKR--PLPEKRVKSYMYQLLKSLDHMHR-NGIFHRDIKPENILIKD-DILKLADFGSCR 147 (282)
T ss_pred CCcEEEEEecCCccHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHH-CCceecccCHHHEEEcC-CCeEEEeccccc
Confidence 24899999999 678877765431 22344566779999999999995 89999999999999999 999999999998
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh----------
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---------- 247 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~---------- 247 (778)
........ .....+..|+|||++.++ ..++.++|+|||||++|||++|.+||......
T Consensus 148 ~~~~~~~~-------~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~ 215 (282)
T cd07831 148 GIYSKPPY-------TEYISTRWYRAPECLLTD-----GYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVL 215 (282)
T ss_pred ccccCCCc-------CCCCCCcccCChhHhhcC-----CCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHc
Confidence 76542111 112344589999976542 34567899999999999999998888532100
Q ss_pred -------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|..+.+++.+||+.+|.+||++.++++|+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~ 280 (282)
T cd07831 216 GTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHP 280 (282)
T ss_pred CCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCC
Confidence 0124567888999999999999999999999998
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-30 Score=273.46 Aligned_cols=241 Identities=14% Similarity=0.176 Sum_probs=185.6
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc---hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ---DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~---~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
.+|++++.+|.|+ | .||+|.++.++..|++|.+...... ......+.+|+.+++.++||||++++++++.+.
T Consensus 2 ~~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-- 77 (266)
T cd06651 2 INWRRGKLLGQGAFG--RVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRA-- 77 (266)
T ss_pred CCccccceecCCCCE--EEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCC--
Confidence 5799999999998 8 8999999999999999998754322 234567889999999999999999999987643
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
...+|+++||+ ++|.+++...... ....+..++.||+.||.|||+ ++++||||+|+||+++.++.+||+|
T Consensus 78 ----~~~~~l~~e~~~~~~L~~~l~~~~~l---~~~~~~~~~~qi~~~l~~LH~-~~i~H~~l~p~nil~~~~~~~~l~d 149 (266)
T cd06651 78 ----EKTLTIFMEYMPGGSVKDQLKAYGAL---TESVTRKYTRQILEGMSYLHS-NMIVHRDIKGANILRDSAGNVKLGD 149 (266)
T ss_pred ----CCEEEEEEeCCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHh-CCeeeCCCCHHHEEECCCCCEEEcc
Confidence 24899999999 4799888765432 233345569999999999995 9999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hhc
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRN 248 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~~ 248 (778)
||++..+........ . .........|+|||.+.+ ..++.++|+|||||++||+++|..||.... ...
T Consensus 150 fg~~~~~~~~~~~~~-~--~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~ 220 (266)
T cd06651 150 FGASKRLQTICMSGT-G--IRSVTGTPYWMSPEVISG------EGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFK 220 (266)
T ss_pred CCCccccccccccCC-c--cccCCccccccCHHHhCC------CCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHH
Confidence 999876543111000 0 011123458999999875 356778999999999999999999885321 111
Q ss_pred ------cCC----CCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ------TAS----IPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ------~~~----iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
... +++.+..++ +||..+|.+||++.++++|+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp 262 (266)
T cd06651 221 IATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHP 262 (266)
T ss_pred HhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCc
Confidence 112 233455555 57778999999999999998
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-30 Score=276.47 Aligned_cols=238 Identities=16% Similarity=0.222 Sum_probs=185.0
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..|.+.+.||.|. | .||.|+++.+|+.|+||.+..+... .....+.+|+..|+.++||||++++++++.+
T Consensus 5 ~~y~~~~~ig~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~------ 75 (291)
T cd07870 5 TSYLNLEKLGEGSYA--TVYKGISRINGQLVALKVISMKTEE-GVPFTAIREASLLKGLKHANIVLLHDIIHTK------ 75 (291)
T ss_pred ceeEEEEEEEecCCE--EEEEEEEcCCCcEEEEEEecccCcC-CCcHHHHHHHHHHHhcCCCCEeEEEEEEecC------
Confidence 4699999999998 8 8999999999999999999764322 2233567899999999999999999999863
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
...|+|+||+ ++|..++..... ......+..++.||+.||.|||+ .+++|+||||+||+++.+|.+||+|||++
T Consensus 76 --~~~~lv~e~~~~~l~~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~ 150 (291)
T cd07870 76 --ETLTFVFEYMHTDLAQYMIQHPG--GLHPYNVRLFMFQLLRGLAYIHG-QHILHRDLKPQNLLISYLGELKLADFGLA 150 (291)
T ss_pred --CeEEEEEecccCCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCChHHEEEcCCCcEEEeccccc
Confidence 3899999999 567766654321 12234466678999999999995 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-----hh----
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-----LR---- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-----l~---- 247 (778)
+........ ......+..|+|||++.+. ..++.++|+|||||++|+|++|..+|.... +.
T Consensus 151 ~~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~ 219 (291)
T cd07870 151 RAKSIPSQT------YSSEVVTLWYRPPDVLLGA-----TDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWT 219 (291)
T ss_pred cccCCCCCC------CCCccccccccCCceeecC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHH
Confidence 765432111 1112335589999998652 245668999999999999999998875211 00
Q ss_pred --------------cc----------------------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 --------------NT----------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 --------------~~----------------------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. ...+..+.+++.+|+..||.+|||+.+++.|+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~ 289 (291)
T cd07870 220 VLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHP 289 (291)
T ss_pred HcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCC
Confidence 00 01134567889999999999999999999998
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-30 Score=276.21 Aligned_cols=239 Identities=20% Similarity=0.303 Sum_probs=189.9
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.+|.|. | .||+|+++.+++.|+||++..........+.+.+|+++++.++||||+++++.+...
T Consensus 2 ~y~~~~~i~~g~~~--~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 72 (288)
T cd07833 2 KYEVLGVVGEGAYG--VVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRK------- 72 (288)
T ss_pred ceeEEEEecccCCe--eEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEEC-------
Confidence 599999999998 8 899999999999999999986544445567789999999999999999999999863
Q ss_pred ccEEEEEecCCc-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 99 KITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 99 ~~~lyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
..+|+|+||+. .+...+.... .......+.+++.||+.||.|||+ .+++|+||+|+||+++.+|.+||+|||++.
T Consensus 73 -~~~~iv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~ 148 (288)
T cd07833 73 -GRLYLVFEYVERTLLELLEASP--GGLPPDAVRSYIWQLLQAIAYCHS-HNIIHRDIKPENILVSESGVLKLCDFGFAR 148 (288)
T ss_pred -CEEEEEEecCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECCCCCEEEEeeeccc
Confidence 38999999994 4444433322 113345577789999999999995 899999999999999999999999999988
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh----------
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---------- 247 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~---------- 247 (778)
........ . .........|+|||++.+. ..++.++|+|||||++|+|++|.++|......
T Consensus 149 ~~~~~~~~---~--~~~~~~~~~~~~PE~~~~~-----~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~ 218 (288)
T cd07833 149 ALRARPAS---P--LTDYVATRWYRAPELLVGD-----TNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCL 218 (288)
T ss_pred ccCCCccc---c--ccCcccccCCcCCchhcCC-----CCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 77653210 1 1112334579999998763 25678999999999999999999877421000
Q ss_pred -----------------------c-----------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -----------------------N-----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -----------------------~-----------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ...+|..+.+++++||..+|.+||++.++++|+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~ 286 (288)
T cd07833 219 GPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHP 286 (288)
T ss_pred CCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCC
Confidence 0 012367788999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-30 Score=278.52 Aligned_cols=236 Identities=17% Similarity=0.235 Sum_probs=191.2
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|++.+.+|.|. | .||+|+++.+|+.|+||.+...... ..+.+.+|+..++.++||||+++++.++..
T Consensus 17 ~~~~y~~~~~lg~g~~g--~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~---- 88 (297)
T cd06656 17 PKKKYTRFEKIGQGASG--TVYTAIDIATGQEVAIKQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVG---- 88 (297)
T ss_pred hhhhceeeeeeccCCCe--EEEEEEECCCCCEEEEEEEecCccc--hHHHHHHHHHHHHhCCCCCEeeEEEEEecC----
Confidence 456899999999998 8 8999999999999999999764332 345688999999999999999999999863
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
.++|+||||+ ++|.+++.+... ....+..++.|++.||.|||+ .+++||||||+||+++.+|.+||+||
T Consensus 89 ----~~~~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~l~~~L~~LH~-~~i~H~dL~p~Nili~~~~~~~l~Df 159 (297)
T cd06656 89 ----DELWVVMEYLAGGSLTDVVTETCM----DEGQIAAVCRECLQALDFLHS-NQVIHRDIKSDNILLGMDGSVKLTDF 159 (297)
T ss_pred ----CEEEEeecccCCCCHHHHHHhCCC----CHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCCCEEECcC
Confidence 4899999999 468888865432 234456679999999999995 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-h-----
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-R----- 247 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l-~----- 247 (778)
|++......... .........|++||.+.+ ..++.++|+|||||++|++++|..||..... .
T Consensus 160 g~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~ 227 (297)
T cd06656 160 GFCAQITPEQSK------RSTMVGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI 227 (297)
T ss_pred ccceEccCCccC------cCcccCCccccCHHHHcC------CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeee
Confidence 998766432111 111233457999999876 3566789999999999999999988854321 0
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ---------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++.+||..+|.+||++.++++|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~ 270 (297)
T cd06656 228 ATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHP 270 (297)
T ss_pred ccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 1123556678899999999999999999999998
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.8e-31 Score=284.94 Aligned_cols=230 Identities=15% Similarity=0.177 Sum_probs=178.5
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhc-CCCCCeeeEeeeeEecccccCCcccEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRT-VRHPNILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~-LrHPnIlk~~d~~e~e~~~g~~~~~~l 102 (778)
.||.|+ | +||+|+++.+++.|+||++..... .+........|..+++. ++||||+++++.+++. ..+
T Consensus 2 ~lG~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~--------~~~ 71 (316)
T cd05619 2 MLGKGSFG--KVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTK--------ENL 71 (316)
T ss_pred eeeeCCCE--EEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeC--------CEE
Confidence 578887 8 999999999999999999986421 11233455667777775 5899999999999874 489
Q ss_pred EEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccC
Q 004025 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (778)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~ 180 (778)
||||||+ ++|..++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++....
T Consensus 72 ~lv~ey~~~g~L~~~l~~~~~~---~~~~~~~~~~qi~~al~~LH~-~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~ 147 (316)
T cd05619 72 FFVMEYLNGGDLMFHIQSCHKF---DLPRATFYAAEIICGLQFLHS-KGIVYRDLKLDNILLDTDGHIKIADFGMCKENM 147 (316)
T ss_pred EEEEeCCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHh-CCeEeCCCCHHHEEECCCCCEEEccCCcceECC
Confidence 9999999 5799888764322 233355669999999999995 899999999999999999999999999987543
Q ss_pred CCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc--------c---
Q 004025 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN--------T--- 249 (778)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~--------~--- 249 (778)
.... ......++..|+|||++.+ ..++.++|+|||||++|||++|..||....... .
T Consensus 148 ~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~ 215 (316)
T cd05619 148 LGDA------KTCTFCGTPDYIAPEILLG------QKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCY 215 (316)
T ss_pred CCCC------ceeeecCCccccCHHHHcC------CCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC
Confidence 2111 0112234568999999876 356789999999999999999999885432111 0
Q ss_pred -CCCCcchHHHHHHHhccCCCCCCChH-HHHhcc
Q 004025 250 -ASIPKSLLPDYQRLLSSMPSRRLNSS-KLIENS 281 (778)
Q Consensus 250 -~~iP~~L~~~i~~lL~~dP~~Rps~~-~lL~~~ 281 (778)
..++..+.+++.+||..+|.+|+++. ++++|+
T Consensus 216 ~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~ 249 (316)
T cd05619 216 PRWLTREAKDILVKLFVREPERRLGVKGDIRQHP 249 (316)
T ss_pred CccCCHHHHHHHHHHhccCHhhcCCChHHHHcCc
Confidence 12455678899999999999999996 888887
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-30 Score=274.91 Aligned_cols=243 Identities=16% Similarity=0.195 Sum_probs=189.2
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
+...|++.+++|.|+ | .||+|+++.++..|++|.+.... ....+.+.+|++.++.++||||+++++.+..+
T Consensus 10 ~~~~y~i~~~lg~g~~g--~vy~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---- 81 (292)
T cd06644 10 PNEVWEIIGELGDGAFG--KVYKAKNKETGALAAAKVIETKS--EEELEDYMVEIEILATCNHPYIVKLLGAFYWD---- 81 (292)
T ss_pred cchhhhhhheecCCCCe--EEEEEEECCCCceEEEEEeccCC--HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeC----
Confidence 445699999999998 7 89999999999999999997642 33456788899999999999999999999864
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..+|+||||+ +.|..++.+... ......+..++.||+.+|.|||+ .+++||||+|+||+++.+|.+||+||
T Consensus 82 ----~~~~lv~e~~~~~~l~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lH~-~~i~H~dlkp~Nili~~~~~~kl~df 154 (292)
T cd06644 82 ----GKLWIMIEFCPGGAVDAIMLELDR--GLTEPQIQVICRQMLEALQYLHS-MKIIHRDLKAGNVLLTLDGDIKLADF 154 (292)
T ss_pred ----CeEEEEEecCCCCcHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhc-CCeeecCCCcceEEEcCCCCEEEccC
Confidence 3899999999 457776654332 12344566679999999999995 99999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------- 246 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l------- 246 (778)
|++........ ..........|++||++.+.... ...++.++|+|||||++|||++|.+|+.....
T Consensus 155 g~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~-~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~ 227 (292)
T cd06644 155 GVSAKNVKTLQ------RRDSFIGTPYWMAPEVVMCETMK-DTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKI 227 (292)
T ss_pred ccceecccccc------ccceecCCccccCceeecccccc-CCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHH
Confidence 98865433110 01122344589999998542100 12356789999999999999999988754211
Q ss_pred h--------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 R--------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ~--------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ....++..+.+++++||..+|.+||++.++++|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 270 (292)
T cd06644 228 AKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHP 270 (292)
T ss_pred hcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 0 0123445678899999999999999999999998
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=296.47 Aligned_cols=234 Identities=17% Similarity=0.153 Sum_probs=182.6
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
..+.|.+.+.||.|+ | .||+|+++.+++.|+||.... ....+|+++|++|+||||+++++++..+
T Consensus 167 ~~~gy~i~~~Lg~G~~G--~Vy~a~~~~~~~~vavK~~~~--------~~~~~E~~iL~~L~HpnIv~l~~~~~~~---- 232 (461)
T PHA03211 167 AGLGFAIHRALTPGSEG--CVFESSHPDYPQRVVVKAGWY--------ASSVHEARLLRRLSHPAVLALLDVRVVG---- 232 (461)
T ss_pred ccCCeEEEEEEccCCCe--EEEEEEECCCCCEEEEecccc--------cCHHHHHHHHHHCCCCCCCcEEEEEEEC----
Confidence 356899999999998 8 899999999999999996432 2356899999999999999999998764
Q ss_pred CCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
...|+|+|++ ++|..++..... ......+..++.||+.||.|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 233 ----~~~~lv~e~~~~~L~~~l~~~~~--~l~~~~~~~i~~qi~~aL~yLH~-~gIvHrDLKP~NILl~~~~~vkL~DFG 305 (461)
T PHA03211 233 ----GLTCLVLPKYRSDLYTYLGARLR--PLGLAQVTAVARQLLSAIDYIHG-EGIIHRDIKTENVLVNGPEDICLGDFG 305 (461)
T ss_pred ----CEEEEEEEccCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH-CCEEECcCCHHHEEECCCCCEEEcccC
Confidence 3789999998 678888765432 12344566779999999999995 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCC-CCCh----------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMR-LSKT---------- 243 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~-p~~~---------- 243 (778)
+++.+...... .......++..|++||++.+ ..++.++|+|||||++|||++|.. +|..
T Consensus 306 la~~~~~~~~~----~~~~~~~GT~~Y~APE~~~~------~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~ 375 (461)
T PHA03211 306 AACFARGSWST----PFHYGIAGTVDTNAPEVLAG------DPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYD 375 (461)
T ss_pred Cceeccccccc----ccccccCCCcCCcCHHHHcC------CCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcH
Confidence 98876432111 01122345568999999876 356789999999999999988753 2211
Q ss_pred hhhhc-------------------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 244 EELRN-------------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 244 ~~l~~-------------------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
.++.. ...+...+.+++++||+.||.+||++.++|+|
T Consensus 376 ~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 376 AQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred HHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00000 00223356778999999999999999999999
Q ss_pred c
Q 004025 281 S 281 (778)
Q Consensus 281 ~ 281 (778)
+
T Consensus 456 p 456 (461)
T PHA03211 456 P 456 (461)
T ss_pred c
Confidence 8
|
|
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.9e-32 Score=289.56 Aligned_cols=237 Identities=20% Similarity=0.314 Sum_probs=195.5
Q ss_pred cCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEE
Q 004025 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~ly 103 (778)
+.+|+|. | +||-|+++.+|+.||||++++-.........+++|+.+|..++||+|+.+...||+ +..+|
T Consensus 570 evLGSGQFG--~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET--------~ervF 639 (888)
T KOG4236|consen 570 EVLGSGQFG--TVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFET--------PERVF 639 (888)
T ss_pred hhccCCcce--eeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecC--------CceEE
Confidence 5678888 8 99999999999999999999876555566889999999999999999999999997 45899
Q ss_pred EEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC---cEEEEeccccccc
Q 004025 104 IVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL---DWKLHAFDVLSEF 179 (778)
Q Consensus 104 IVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g---~~KL~dFgla~~~ 179 (778)
+|||.+ ++..+.|-... .+...+..-+..+.||+.||.||| ..+|+|+||||+||++.... .+||||||+++.+
T Consensus 640 VVMEKl~GDMLEMILSsE-kgRL~er~TkFlvtQIL~ALr~LH-~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiI 717 (888)
T KOG4236|consen 640 VVMEKLHGDMLEMILSSE-KGRLPERITKFLVTQILVALRYLH-FKNIVHCDLKPENVLLASASPFPQVKLCDFGFARII 717 (888)
T ss_pred EEehhhcchHHHHHHHhh-cccchHHHHHHHHHHHHHHHHHhh-hcceeeccCCchheeeccCCCCCceeeccccceeec
Confidence 999999 77555443322 122334455666999999999999 59999999999999998654 5999999999998
Q ss_pred CCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh-----hhhcc-----
Q 004025 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-----ELRNT----- 249 (778)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~-----~l~~~----- 249 (778)
.+... +..-++++.|.|||++.+ ++|..+.||||.|++||--++|..||+.+ ++++-
T Consensus 718 gEksF-------RrsVVGTPAYLaPEVLrn------kGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyP 784 (888)
T KOG4236|consen 718 GEKSF-------RRSVVGTPAYLAPEVLRN------KGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYP 784 (888)
T ss_pred chhhh-------hhhhcCCccccCHHHHhh------ccccccccceeeeEEEEEEecccccCCCccchhHHhhccccccC
Confidence 76421 223356679999999987 68889999999999999999999888642 33331
Q ss_pred ----CCCCcchHHHHHHHhccCCCCCCChHHHHhcccCCcccccc
Q 004025 250 ----ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEY 290 (778)
Q Consensus 250 ----~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~f 290 (778)
..|.....+++..||+..-.+|.++++.+.|+ |+++|
T Consensus 785 p~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~----Wlq~y 825 (888)
T KOG4236|consen 785 PNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHP----WLQDY 825 (888)
T ss_pred CCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccch----hhhcc
Confidence 35667788999999999999999999999999 88765
|
|
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=280.05 Aligned_cols=254 Identities=19% Similarity=0.324 Sum_probs=191.4
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
..+|++.+.||.|+ | .||+|+++.+++.|+||++......+.....+.+|++.++.++||||+++++.+.......+
T Consensus 7 ~~~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 84 (311)
T cd07866 7 LRDYEILGKLGEGTFG--EVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSK 84 (311)
T ss_pred cccEEEEEEeccCCCE--EEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccc
Confidence 46799999999998 7 89999999999999999997654444334457789999999999999999998865432211
Q ss_pred CcccEEEEEecCCc-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 97 STKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 97 ~~~~~lyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
.....+|+|+||+. +|...+..... ......+..++.||++||.|||+ .+++|+||+|+||+++.+|.+||+|||+
T Consensus 85 ~~~~~~~lv~~~~~~~l~~~~~~~~~--~~~~~~~~~i~~~l~~al~~lH~-~~i~H~dl~p~nil~~~~~~~~l~dfg~ 161 (311)
T cd07866 85 RKRGSVYMVTPYMDHDLSGLLENPSV--KLTESQIKCYMLQLLEGINYLHE-NHILHRDIKAANILIDNQGILKIADFGL 161 (311)
T ss_pred ccCceEEEEEecCCcCHHHHHhcccc--CCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECCCCCEEECcCcc
Confidence 22457899999994 57666654321 23445577789999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCC----Cccc-cccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh---
Q 004025 176 LSEFDGNNEAANG----PMLQ-YAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--- 247 (778)
Q Consensus 176 a~~~~~~~~~~~~----~~~~-~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~--- 247 (778)
+............ .... ....+...|+|||++.+. ..++.++|+|||||++|||++|.++|......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~ 236 (311)
T cd07866 162 ARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGE-----RRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQL 236 (311)
T ss_pred chhccCCCcccccCCcccccccccceeccCcCChHHhhCC-----CccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 9866543211110 0000 111234479999987653 34677899999999999999999887532100
Q ss_pred ---------------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ---------------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ---------------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+...+.+++.+||..+|.+||++.+++.|+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~ 309 (311)
T cd07866 237 HLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHP 309 (311)
T ss_pred HHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCC
Confidence 0012334577899999999999999999999997
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-30 Score=278.81 Aligned_cols=236 Identities=17% Similarity=0.224 Sum_probs=190.4
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
....|++.+.+|.|. | .||+|+++.++..|+||.+...... ..+.+.+|+.+++.++||||+++++.+...
T Consensus 18 ~~~~y~~~~~lg~g~~~--~v~~~~~~~~~~~v~ik~~~~~~~~--~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~---- 89 (296)
T cd06654 18 PKKKYTRFEKIGQGASG--TVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVG---- 89 (296)
T ss_pred cccceeeEEEecCCCCe--EEEEEEECCCCcEEEEEEEecCCcc--hHHHHHHHHHHHHhCCCCCEeeEEEEEEeC----
Confidence 456899999999998 7 8999999999999999999865433 245688999999999999999999999863
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
.+.|+||||+ ++|.+++..... ....+..++.||+.||.|||+ .+++||||||+||+++.++.+||+||
T Consensus 90 ----~~~~lv~e~~~~~~L~~~~~~~~~----~~~~~~~i~~ql~~aL~~LH~-~gi~H~dLkp~Nill~~~~~~kl~df 160 (296)
T cd06654 90 ----DELWVVMEYLAGGSLTDVVTETCM----DEGQIAAVCRECLQALEFLHS-NQVIHRDIKSDNILLGMDGSVKLTDF 160 (296)
T ss_pred ----CEEEEeecccCCCCHHHHHHhcCC----CHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEEcCCCCEEECcc
Confidence 4899999999 469888865432 233345568999999999995 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------ 247 (778)
|++......... .....+...|+|||.+.+ ..++.++|+|||||++|+|++|..||......
T Consensus 161 g~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~ 228 (296)
T cd06654 161 GFCAQITPEQSK------RSTMVGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI 228 (296)
T ss_pred ccchhccccccc------cCcccCCccccCHHHHcC------CCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHH
Confidence 998765432110 011134458999999875 34567999999999999999999988543210
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ---------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++.+||..+|..||++.++++|+
T Consensus 229 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~ 271 (296)
T cd06654 229 ATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQ 271 (296)
T ss_pred hcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhCh
Confidence 1123556688899999999999999999999998
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-30 Score=272.79 Aligned_cols=240 Identities=17% Similarity=0.274 Sum_probs=189.5
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc----hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ----DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~----~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
+|++++.+|.|. | .||.|+.+.+++.|+||++...... ....+.+++|++.|++++||||+++++.+...
T Consensus 1 ~~~~~~~lg~g~~~--~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--- 75 (268)
T cd06630 1 EWLKGQQLGTGAFS--SCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCED--- 75 (268)
T ss_pred CccccceecCcCce--EEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccC---
Confidence 589999999998 8 8999999999999999999754321 13467789999999999999999999999763
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC-cEEEE
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-DWKLH 171 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g-~~KL~ 171 (778)
..+|+|+||+ ++|.+++++... .....+..++.||+.||.|||+ .+++|+||+|+||+++.+| .+||+
T Consensus 76 -----~~~~~v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~ql~~al~~LH~-~~i~H~~i~~~nil~~~~~~~~~l~ 146 (268)
T cd06630 76 -----SHFNLFVEWMAGGSVSHLLSKYGA---FKEAVIINYTEQLLRGLSYLHE-NQIIHRDVKGANLLIDSTGQRLRIA 146 (268)
T ss_pred -----CeEEEEEeccCCCcHHHHHHHhCC---CCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCCCEEEEc
Confidence 4899999999 479998876542 2234456669999999999995 8999999999999998776 59999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc---
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN--- 248 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~--- 248 (778)
|||++........... .......++..|+|||++.+ ..++.++|+|||||++|+|++|..||.......
T Consensus 147 dfg~~~~~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~------~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~ 218 (268)
T cd06630 147 DFGAAARLAAKGTGAG--EFQGQLLGTIAFMAPEVLRG------EQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLA 218 (268)
T ss_pred ccccccccccccccCC--ccccccccccceeCHhHhcc------CCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHH
Confidence 9999877754311110 01111234458999999865 356678999999999999999998875332110
Q ss_pred ----------cC----CCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ----------TA----SIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ----------~~----~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. .++..+.+++.+||..+|..||++.++++|+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~ 265 (268)
T cd06630 219 LIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHP 265 (268)
T ss_pred HHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCc
Confidence 11 2455677889999999999999999999998
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.9e-31 Score=274.83 Aligned_cols=235 Identities=15% Similarity=0.236 Sum_probs=191.9
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.+|.|+ | .||.|+++.+++.|+||++.+..... ...+.+.+|++++++++||||+++++.++..
T Consensus 1 ~y~~~~~i~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 72 (258)
T cd05578 1 HFELLRVIGKGAFG--KVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDE------ 72 (258)
T ss_pred CceEEEEeccCCCc--eEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCC------
Confidence 489999999998 7 89999999999999999998654332 4567889999999999999999999999763
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
.++|+|+||+ ++|..++..... .....+..++.||++||.|||+ .+++|+||+|+||+++++|.++|+|||+
T Consensus 73 --~~~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~~~nil~~~~~~~~l~d~~~ 146 (258)
T cd05578 73 --ENMYLVVDLLLGGDLRYHLSQKVK---FSEEQVKFWICEIVLALEYLHS-KGIIHRDIKPDNILLDEQGHVHITDFNI 146 (258)
T ss_pred --CeEEEEEeCCCCCCHHHHHHhcCC---cCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHeEEcCCCCEEEeeccc
Confidence 4899999999 579999877521 2234456679999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh------h--
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------R-- 247 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l------~-- 247 (778)
+........ .....+...|++||.+.+. .++.++|+|||||++|+|++|..|+..... .
T Consensus 147 ~~~~~~~~~-------~~~~~~~~~y~~PE~~~~~------~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~ 213 (258)
T cd05578 147 ATKVTPDTL-------TTSTSGTPGYMAPEVLCRQ------GYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAK 213 (258)
T ss_pred ccccCCCcc-------ccccCCChhhcCHHHHccc------CCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHH
Confidence 887654211 1112234479999998763 467899999999999999999988764321 1
Q ss_pred -------ccCCCCcchHHHHHHHhccCCCCCCCh--HHHHhcc
Q 004025 248 -------NTASIPKSLLPDYQRLLSSMPSRRLNS--SKLIENS 281 (778)
Q Consensus 248 -------~~~~iP~~L~~~i~~lL~~dP~~Rps~--~~lL~~~ 281 (778)
....+|..+.+++.+||..+|.+|++. .++++|+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~ 256 (258)
T cd05578 214 QETADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHP 256 (258)
T ss_pred hccccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCC
Confidence 113467788899999999999999999 9999997
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-31 Score=272.88 Aligned_cols=244 Identities=19% Similarity=0.269 Sum_probs=195.7
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCC----cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGS----PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~----~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
+.|++..+||.|. | .||+|..+.++. .+|||.|+...........+-+|+..+|.|+||||+.++.+|.+.
T Consensus 24 ~~ye~ig~Ig~GTYG--~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~-- 99 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYG--KVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSH-- 99 (438)
T ss_pred HHhhccceecccccc--eeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhcc--
Confidence 5799999999999 9 999998776654 789999997766666667789999999999999999999999764
Q ss_pred ccCCcccEEEEEecCCc-ChHHHHHHhCc--CCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC----C
Q 004025 94 DATSTKITIYIVTEPVM-PLSEKIKELGL--EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT----L 166 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v~-~L~~~L~~~~~--~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~----g 166 (778)
...+++++||.+ +|...|+-... ........++.+++||+.|+.|||+ +-++||||||.||+|..+ |
T Consensus 100 -----d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~-NWvlHRDLKPaNIlvmgdgperG 173 (438)
T KOG0666|consen 100 -----DKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHS-NWVLHRDLKPANILVMGDGPERG 173 (438)
T ss_pred -----CceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhh-hheeeccCCcceEEEeccCCccC
Confidence 248999999995 79998876542 2223345678889999999999996 889999999999999877 9
Q ss_pred cEEEEecccccccCCCCCCCCCCccccc-cccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh-
Q 004025 167 DWKLHAFDVLSEFDGNNEAANGPMLQYA-WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE- 244 (778)
Q Consensus 167 ~~KL~dFgla~~~~~~~~~~~~~~~~~~-~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~- 244 (778)
.+||+|||+++.+.+.- .++.... -+++..|+|||++.+. ..|+.++|+|+.||++.||++-.|+|.+.
T Consensus 174 ~VKIaDlGlaR~~~~pl----kpl~s~d~VVVTiWYRAPELLLGa-----~hYT~AiDvWAiGCIfaElLtl~PlF~g~E 244 (438)
T KOG0666|consen 174 RVKIADLGLARLFNNPL----KPLASLDPVVVTIWYRAPELLLGA-----RHYTKAIDVWAIGCIFAELLTLEPLFKGRE 244 (438)
T ss_pred eeEeecccHHHHhhccc----cccccCCceEEEEEecChHHhccc-----ccccchhhhHHHHHHHHHHHccCccccchh
Confidence 99999999999887631 1222222 2445599999999986 78999999999999999999988776432
Q ss_pred ------------hhhcc---------------CCC------------------------------CcchHHHHHHHhccC
Q 004025 245 ------------ELRNT---------------ASI------------------------------PKSLLPDYQRLLSSM 267 (778)
Q Consensus 245 ------------~l~~~---------------~~i------------------------------P~~L~~~i~~lL~~d 267 (778)
++..+ .++ +++...++.+||+.|
T Consensus 245 ~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yD 324 (438)
T KOG0666|consen 245 EKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYD 324 (438)
T ss_pred hhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccC
Confidence 22111 111 223566788999999
Q ss_pred CCCCCChHHHHhcc
Q 004025 268 PSRRLNSSKLIENS 281 (778)
Q Consensus 268 P~~Rps~~~lL~~~ 281 (778)
|.+|+++.+.++|.
T Consensus 325 P~kRIta~qAleh~ 338 (438)
T KOG0666|consen 325 PIKRITAEQALEHP 338 (438)
T ss_pred chhhccHHHHhccc
Confidence 99999999999997
|
|
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-30 Score=274.91 Aligned_cols=235 Identities=17% Similarity=0.180 Sum_probs=190.2
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.||.|. | .||++.++.+++.|+||.+...... .....+.+|+++++.++||||+++++.+..+
T Consensus 2 ~~~~~~~ig~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------- 71 (265)
T cd06605 2 DLEYLGELGAGNSG--VVSKVLHRPTGKIMAVKTIRLEINE-AIQKQILRELDILHKCNSPYIVGFYGAFYNN------- 71 (265)
T ss_pred cchHHHHhcCCCCe--EEEEEEEcCCCcEEEEEEEecccCh-HHHHHHHHHHHHHHHCCCCchhhhheeeecC-------
Confidence 588889999998 7 8999999999999999999875433 3456788999999999999999999999874
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|+++||+ ++|.+++.... .......+..++.||+.||.|||+..+++|+||+|+||+++.+|.+||+|||.+
T Consensus 72 -~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~ 148 (265)
T cd06605 72 -GDISICMEYMDGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVS 148 (265)
T ss_pred -CEEEEEEEecCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccc
Confidence 3899999999 47999887653 122344566679999999999995489999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh---------hhh
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE---------ELR 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~---------~l~ 247 (778)
........ . .......|+|||.+.+ ..++.++|+|||||++|+|++|..|+... .+.
T Consensus 149 ~~~~~~~~-------~-~~~~~~~y~~PE~~~~------~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~ 214 (265)
T cd06605 149 GQLVNSLA-------K-TFVGTSSYMAPERIQG------NDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQ 214 (265)
T ss_pred hhhHHHHh-------h-cccCChhccCHHHHcC------CCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHH
Confidence 76643210 0 1234458999999876 35678999999999999999999887432 111
Q ss_pred c-----cCC-----CCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 N-----TAS-----IPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ~-----~~~-----iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ... ++..+.+++.+||..+|.+||++.+++.|+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~ 258 (265)
T cd06605 215 YIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHP 258 (265)
T ss_pred HHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCc
Confidence 0 011 566688999999999999999999999998
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-30 Score=273.52 Aligned_cols=229 Identities=16% Similarity=0.147 Sum_probs=184.0
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.+|.|. | .||+|++..++..|+||++..... ......+.+|+++|++++||||+++++.++.+
T Consensus 2 ~~~~~~~lg~g~~~--~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------- 71 (279)
T cd06619 2 DIQYQEILGHGNGG--TVYKAYHLLTRRILAVKVIPLDIT-VELQKQIMSELEILYKCDSPYIIGFYGAFFVE------- 71 (279)
T ss_pred cchheeeeccCCCe--EEEEEEEcCCCcEEEEEEEecCCC-hHHHHHHHHHHHHHHhCCCCCeeeEEEEEEEC-------
Confidence 588889999998 7 899999999999999999976432 23445688999999999999999999999874
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
...|+||||+ +.|..+. . .....+..++.||+.||.|||+ .+++|+||||+||+++.+|.+||+|||++
T Consensus 72 -~~~~lv~e~~~~~~l~~~~-~------~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nill~~~~~~~l~dfg~~ 142 (279)
T cd06619 72 -NRISICTEFMDGGSLDVYR-K------IPEHVLGRIAVAVVKGLTYLWS-LKILHRDVKPSNMLVNTRGQVKLCDFGVS 142 (279)
T ss_pred -CEEEEEEecCCCCChHHhh-c------CCHHHHHHHHHHHHHHHHHHHH-CCEeeCCCCHHHEEECCCCCEEEeeCCcc
Confidence 3889999999 3454331 1 1234456679999999999995 99999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----------h
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----------L 246 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----------l 246 (778)
....... .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||.... .
T Consensus 143 ~~~~~~~--------~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~ 208 (279)
T cd06619 143 TQLVNSI--------AKTYVGTNAYMAPERISG------EQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQL 208 (279)
T ss_pred eeccccc--------ccCCCCChhhcCceeecC------CCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHH
Confidence 7664321 111234558999999876 356789999999999999999998874311 0
Q ss_pred -hc----------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 -RN----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 -~~----------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. ...++..+.+++.+||..+|.+||++.++++|+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~ 254 (279)
T cd06619 209 LQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHP 254 (279)
T ss_pred HHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCc
Confidence 00 123456688999999999999999999999998
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-30 Score=270.69 Aligned_cols=236 Identities=19% Similarity=0.254 Sum_probs=188.9
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.+|.|+ | .||.++++.++..|++|.+..... ....+.+.+|+.+++.++||||+++++.++.+
T Consensus 1 ~y~~~~~lg~g~~g--~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 70 (255)
T cd08219 1 QYNVLRVVGEGSFG--RALLVQHVNSDQKYAMKEIRLPKS-SSAVEDSRKEAVLLAKMKHPNIVAFKESFEAD------- 70 (255)
T ss_pred CceEEEEeeccCCe--EEEEEEEcCCCceEEEEEEEcCcc-hHHHHHHHHHHHHHHhCCCCCcceEEEEEEEC-------
Confidence 589999999998 7 899999999999999999975432 23456788999999999999999999999874
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|+|+||+ ++|.+++...... ......+..++.||+.||.|||+ .+++|+||+|+||+++.++.++|+|||++
T Consensus 71 -~~~~lv~e~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~i~~al~~lH~-~~i~H~dl~p~nili~~~~~~~l~dfg~~ 147 (255)
T cd08219 71 -GHLYIVMEYCDGGDLMQKIKLQRGK-LFPEDTILQWFVQMCLGVQHIHE-KRVLHRDIKSKNIFLTQNGKVKLGDFGSA 147 (255)
T ss_pred -CEEEEEEeeCCCCcHHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCcceEEECCCCcEEEcccCcc
Confidence 4899999999 4788887653321 12344456668999999999995 99999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc--------
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN-------- 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~-------- 248 (778)
......... .....+...|+|||++.+ ..++.++|+||||+++|+|++|..||.......
T Consensus 148 ~~~~~~~~~------~~~~~~~~~~~aPE~~~~------~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~ 215 (255)
T cd08219 148 RLLTSPGAY------ACTYVGTPYYVPPEIWEN------MPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQG 215 (255)
T ss_pred eeecccccc------cccccCCccccCHHHHcc------CCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcC
Confidence 766542111 112234557999999876 356778999999999999999999886433211
Q ss_pred -c----CCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 249 -T----ASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 249 -~----~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. ..++..+.+++.+||+.+|.+||++.+++..
T Consensus 216 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 216 SYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 1 2345567889999999999999999999865
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=278.42 Aligned_cols=249 Identities=18% Similarity=0.276 Sum_probs=191.7
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc--
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID-- 94 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~-- 94 (778)
...|++.+.+|.|. | +||+|+++.+|+.|+||.+......+.....+.+|++.+++++||||+++++.+.++...
T Consensus 6 ~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 6 VDKFDIIGQIGEGTYG--QVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhheeeeecccCCE--EEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 45799999999987 7 999999999999999999986544334445678899999999999999999998754200
Q ss_pred cCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 95 ATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 95 g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
-......+|+|+||+ +.|...+.... .......+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+||
T Consensus 84 ~~~~~~~~~lv~e~~~~~l~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~-~~i~H~dl~p~nili~~~~~~kl~df 160 (302)
T cd07864 84 FKKDKGAFYLVFEYMDHDLMGLLESGL--VHFSEDHIKSFMKQLLEGLNYCHK-KNFLHRDIKCSNILLNNKGQIKLADF 160 (302)
T ss_pred ccccCCcEEEEEcccCccHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECCCCcEEeCcc
Confidence 000123799999999 45766665432 122344566779999999999995 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------- 246 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l------- 246 (778)
|++......... + .........|++||++.+. ...+.++|+|||||++|+|++|.++|.....
T Consensus 161 g~~~~~~~~~~~---~--~~~~~~~~~y~~PE~~~~~-----~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~ 230 (302)
T cd07864 161 GLARLYNSEESR---P--YTNKVITLWYRPPELLLGE-----ERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELI 230 (302)
T ss_pred cccccccCCccc---c--cccceeccCccChHHhcCC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence 999876543210 0 0111234479999987642 2356789999999999999999988753210
Q ss_pred -----------------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 -----------------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 -----------------------------------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....+|..+.+++.+||..+|.+||++.+++.|+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~ 300 (302)
T cd07864 231 SRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSP 300 (302)
T ss_pred HHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCC
Confidence 00124678899999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=284.62 Aligned_cols=230 Identities=15% Similarity=0.196 Sum_probs=181.5
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecccccCCcccEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~g~~~~~~l 102 (778)
.||.|+ | +||.|+++.+++.|+||++.+.... +.....+.+|+.+++++ +||||++++++++.. ..+
T Consensus 2 ~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~--------~~~ 71 (327)
T cd05617 2 VIGRGSYA--KVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTT--------SRL 71 (327)
T ss_pred eeeeCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeC--------CEE
Confidence 578887 7 9999999999999999999864322 23456688999999888 599999999999864 489
Q ss_pred EEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccC
Q 004025 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (778)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~ 180 (778)
|+||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++....
T Consensus 72 ~lv~e~~~~~~L~~~~~~~~~---l~~~~~~~~~~qi~~al~~lH~-~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~ 147 (327)
T cd05617 72 FLVIEYVNGGDLMFHMQRQRK---LPEEHARFYAAEICIALNFLHE-RGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGL 147 (327)
T ss_pred EEEEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHEEEeCCCCEEEeccccceecc
Confidence 9999999 478888866432 2344566779999999999996 899999999999999999999999999987533
Q ss_pred CCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh----------hh----
Q 004025 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----------EL---- 246 (778)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~----------~l---- 246 (778)
.... ......++..|+|||++.+ ..++.++|+|||||++|||++|..||... .+
T Consensus 148 ~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~ 215 (327)
T cd05617 148 GPGD------TTSTFCGTPNYIAPEILRG------EEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVI 215 (327)
T ss_pred CCCC------ceecccCCcccCCHHHHCC------CCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHH
Confidence 2111 0112345568999999876 35678999999999999999999998421 00
Q ss_pred -hcc----CCCCcchHHHHHHHhccCCCCCCCh------HHHHhcc
Q 004025 247 -RNT----ASIPKSLLPDYQRLLSSMPSRRLNS------SKLIENS 281 (778)
Q Consensus 247 -~~~----~~iP~~L~~~i~~lL~~dP~~Rps~------~~lL~~~ 281 (778)
... ..++..+..++++||+.||.+|+++ .++++|+
T Consensus 216 ~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~ 261 (327)
T cd05617 216 LEKPIRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHT 261 (327)
T ss_pred HhCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCC
Confidence 011 2345567889999999999999984 6899997
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-31 Score=289.94 Aligned_cols=230 Identities=17% Similarity=0.223 Sum_probs=177.3
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcC---CCCCeeeEeeeeEecccccCCcccE
Q 004025 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTV---RHPNILAFLHSTEVENIDATSTKIT 101 (778)
Q Consensus 27 lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~L---rHPnIlk~~d~~e~e~~~g~~~~~~ 101 (778)
||.|+ | +||+|+++.+|+.|+||++.+.... ........+|..++..+ +||||+++++.++.. ..
T Consensus 1 lG~G~~g--~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~--------~~ 70 (330)
T cd05586 1 IGKGTFG--QVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTD--------SD 70 (330)
T ss_pred CCCCCce--EEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecC--------Ce
Confidence 56777 7 9999999999999999999753221 12233344566666655 699999999999874 48
Q ss_pred EEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccccc
Q 004025 102 IYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (778)
Q Consensus 102 lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~ 179 (778)
+||||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++...
T Consensus 71 ~~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~qil~al~~LH~-~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~ 146 (330)
T cd05586 71 LYLVTDYMSGGELFWHLQKEGR---FSEDRAKFYIAELVLALEHLHK-YDIVYRDLKPENILLDATGHIALCDFGLSKAN 146 (330)
T ss_pred EEEEEcCCCCChHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeEeccCCHHHeEECCCCCEEEecCCcCcCC
Confidence 99999999 478888876543 2344566679999999999995 89999999999999999999999999998754
Q ss_pred CCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc----c------
Q 004025 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN----T------ 249 (778)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~----~------ 249 (778)
..... ......++..|+|||++.+. ..++.++|+|||||++|+|++|..||....... +
T Consensus 147 ~~~~~------~~~~~~gt~~y~aPE~~~~~-----~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~ 215 (330)
T cd05586 147 LTDNK------TTNTFCGTTEYLAPEVLLDE-----KGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVR 215 (330)
T ss_pred CCCCC------CccCccCCccccCHHHHcCC-----CCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCC
Confidence 32111 01122455689999998653 346788999999999999999998885432211 1
Q ss_pred ---CCCCcchHHHHHHHhccCCCCCC----ChHHHHhcc
Q 004025 250 ---ASIPKSLLPDYQRLLSSMPSRRL----NSSKLIENS 281 (778)
Q Consensus 250 ---~~iP~~L~~~i~~lL~~dP~~Rp----s~~~lL~~~ 281 (778)
..++..+.+++++||..+|.+|+ ++.++++|+
T Consensus 216 ~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~ 254 (330)
T cd05586 216 FPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHP 254 (330)
T ss_pred CCCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCc
Confidence 13566788999999999999998 689999998
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-30 Score=310.65 Aligned_cols=247 Identities=19% Similarity=0.185 Sum_probs=194.0
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
....+|++.+.||.|+ | +||.|+++.++..|++|++............+.+|+.+|+.|+||||+++++.|....
T Consensus 10 ~~l~~YeIl~kLG~GgFG--tVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~-- 85 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFG--EVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKA-- 85 (1021)
T ss_pred cccCCEEEEEEEecCCCe--EEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecC--
Confidence 3445899999999998 8 9999999999999999999876555555677899999999999999999999987543
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCc-CCCcchHHHHHHHHHHHHHHHHHHcC------CCccccccCCCCeEEcC-
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNND------CKLVHGNVCLSSVVVTQ- 164 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~------~~ivH~dLkp~NI~v~~- 164 (778)
...+||||||| ++|..+|..... ........+..++.||+.||.|||+. .+|||+||||+||||+.
T Consensus 86 ----~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~ 161 (1021)
T PTZ00266 86 ----NQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTG 161 (1021)
T ss_pred ----CCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecC
Confidence 34899999999 579998876422 12233445667799999999999962 24999999999999964
Q ss_pred ----------------CCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHH
Q 004025 165 ----------------TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLG 228 (778)
Q Consensus 165 ----------------~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG 228 (778)
.+.+||+|||++..+..... .....++..|+|||++.+.- ..++.++||||||
T Consensus 162 ~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~-------~~s~vGTp~YmAPEvL~ge~----~~~s~KSDVWSLG 230 (1021)
T PTZ00266 162 IRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESM-------AHSCVGTPYYWSPELLLHET----KSYDDKSDMWALG 230 (1021)
T ss_pred ccccccccccccccCCCCceEEccCCcccccccccc-------ccccCCCccccCHHHHhccC----CCCCchhHHHHHH
Confidence 34489999999987643211 11224556899999986421 2466789999999
Q ss_pred HHHHHHHhCCCCCChhh----h----hc-----cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 229 CLIYELFSGMRLSKTEE----L----RN-----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 229 ~liyel~tg~~p~~~~~----l----~~-----~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
|+||||++|..||.... + .. ...++..+..++.+||..+|..||++.++|.++
T Consensus 231 ~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~ 296 (1021)
T PTZ00266 231 CIIYELCSGKTPFHKANNFSQLISELKRGPDLPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQ 296 (1021)
T ss_pred HHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccH
Confidence 99999999999885321 1 11 123456789999999999999999999999987
|
|
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-30 Score=272.54 Aligned_cols=238 Identities=16% Similarity=0.240 Sum_probs=187.8
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|++.+.+|.|. | .||+|..+.+++.|++|++.... .....+.+|++.++.++||||+++++.+..+
T Consensus 4 ~~~~~~~~~~ig~g~~~--~v~~~~~~~~~~~~~~K~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---- 74 (263)
T cd05052 4 ERTDITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE---- 74 (263)
T ss_pred chHHeEEeeecCCcccc--eEEEEEEecCCceEEEEEecCCc---hHHHHHHHHHHHHHhCCCCChhheEEEEcCC----
Confidence 345699999999998 8 89999999999999999987432 2345688999999999999999999998764
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..+|+||||+ ++|.+++...... ......+.+++.|++.||.|||+ .+++||||||+||+++.++.+||+||
T Consensus 75 ----~~~~lv~e~~~~~~L~~~~~~~~~~-~l~~~~~~~~~~ql~~~l~~lH~-~~i~H~dlkp~nil~~~~~~~kl~df 148 (263)
T cd05052 75 ----PPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLVGENHLVKVADF 148 (263)
T ss_pred ----CCcEEEEEeCCCCcHHHHHHhCCCC-CCCHHHHHHHHHHHHHHHHHHHh-CCEeecccCcceEEEcCCCcEEeCCC
Confidence 3789999998 5799988764322 22344566779999999999995 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhh-------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE------- 245 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~------- 245 (778)
|++.......... ......+..|++||.+.+ ..++.++|+|||||++|||++ |..|+....
T Consensus 149 ~~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~ 217 (263)
T cd05052 149 GLSRLMTGDTYTA-----HAGAKFPIKWTAPESLAY------NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL 217 (263)
T ss_pred ccccccccceeec-----cCCCCCccccCCHHHhcc------CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 9988765421100 011112347999998875 356678999999999999998 777774321
Q ss_pred hhc------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 246 LRN------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 246 l~~------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
+.. ...+|..+.+++.+||..+|..||++.++++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~ 258 (263)
T cd05052 218 LEKGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQA 258 (263)
T ss_pred HHCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHH
Confidence 111 13467789999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-30 Score=271.93 Aligned_cols=239 Identities=18% Similarity=0.204 Sum_probs=187.5
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.+|.|. | .||+|+.+.+++.|+||.+..... .......+.+|++++++++||||+++++.+...
T Consensus 3 ~~~i~~~l~~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 74 (267)
T cd08228 3 NFQIEKKIGRGQFS--EVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIED------ 74 (267)
T ss_pred ceeeeeeeccCCCe--eEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEEC------
Confidence 699999999998 8 899999999999999998875332 234455688999999999999999999999863
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcC-CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLE-GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~-~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+|+|+||+ ++|..++...... .......+..++.||+.||.|||+ .+++|+||+|+||+++.+|.++|+|||
T Consensus 75 --~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dl~~~nil~~~~~~~~l~d~g 151 (267)
T cd08228 75 --NELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHS-RRVMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred --CeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhh-CCeeCCCCCHHHEEEcCCCCEEECccc
Confidence 3899999999 4788887653321 112334456669999999999995 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh--------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------- 246 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l-------- 246 (778)
++......... .....+...|+|||.+.+ ...+.++|+|||||++|||++|+.|+.....
T Consensus 152 ~~~~~~~~~~~------~~~~~~~~~~~aPE~~~~------~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~ 219 (267)
T cd08228 152 LGRFFSSKTTA------AHSLVGTPYYMSPERIHE------NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQK 219 (267)
T ss_pred cceeccchhHH------HhcCCCCccccChhhhcc------CCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHH
Confidence 98876542110 111233457999999875 3466789999999999999999988743211
Q ss_pred -hc--c-----CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 -RN--T-----ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 -~~--~-----~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. . ..++..+.+++.+||..+|.+||++.++++..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~ 262 (267)
T cd08228 220 IEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIA 262 (267)
T ss_pred HhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHH
Confidence 00 0 13455688999999999999999999998753
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-30 Score=269.04 Aligned_cols=232 Identities=19% Similarity=0.236 Sum_probs=179.0
Q ss_pred cCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEE
Q 004025 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~ly 103 (778)
+.||.|+ | +||+|+++.+++.|+||.+.... .......+.+|+++|++++||||+++++++... ..+|
T Consensus 1 ~~lg~g~~g--~vy~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--------~~~~ 69 (252)
T cd05084 1 ERIGRGNFG--EVFSGRLRADNTPVAVKSCRETL-PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK--------QPIY 69 (252)
T ss_pred CccCcccCc--cEEEEEEecCCceEEEEecCccC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCC--------CCeE
Confidence 4678887 8 89999999999999999986543 233456788999999999999999999998764 3799
Q ss_pred EEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCC
Q 004025 104 IVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (778)
Q Consensus 104 IVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~ 181 (778)
|||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+|||++.....
T Consensus 70 lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 146 (252)
T cd05084 70 IVMELVQGGDFLTFLRTEGP--RLKVKELIQMVENAAAGMEYLES-KHCIHRDLAARNCLVTEKNVLKISDFGMSREEED 146 (252)
T ss_pred EEEeeccCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHh-CCccccccchheEEEcCCCcEEECccccCccccc
Confidence 999999 479888875432 12234456669999999999995 8999999999999999999999999999876543
Q ss_pred CCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhh---h-h---------
Q 004025 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE---L-R--------- 247 (778)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~---l-~--------- 247 (778)
....... .....+..|+|||.+.++ .++.++|+|||||++|||++ |..|+.... . .
T Consensus 147 ~~~~~~~----~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 216 (252)
T cd05084 147 GVYASTG----GMKQIPVKWTAPEALNYG------RYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLP 216 (252)
T ss_pred ccccccC----CCCCCceeecCchhhcCC------CCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCC
Confidence 2100000 000112369999998763 46778999999999999997 777664211 1 0
Q ss_pred ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 ~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+|..+.+++++||..+|.+||++.++++.
T Consensus 217 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~ 249 (252)
T cd05084 217 CPELCPDAVYRLMERCWEYDPGQRPSFSTVHQE 249 (252)
T ss_pred CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 012456778899999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=284.10 Aligned_cols=236 Identities=18% Similarity=0.224 Sum_probs=184.8
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecccccC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~g~ 96 (778)
.|++.+.||.|+ | +||+|.++.+|+.||||++.+... .+...+.+..|.++++.+. ||+|++++++++++
T Consensus 1 ~f~~~~~lg~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~----- 73 (323)
T cd05615 1 DFNFLMVLGKGSFG--KVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTV----- 73 (323)
T ss_pred CceEEEEEEecCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecC-----
Confidence 478889999998 8 999999999999999999985422 1233456778888888886 56788899988764
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+|+||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 74 ---~~~~lv~Ey~~~g~L~~~i~~~~~---l~~~~~~~i~~qi~~al~~lH~-~~ivHrDikp~Nill~~~~~ikL~Dfg 146 (323)
T cd05615 74 ---DRLYFVMEYVNGGDLMYHIQQVGK---FKEPQAVFYAAEISVGLFFLHR-RGIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred ---CEEEEEEcCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHeEECCCCCEEEeccc
Confidence 3899999999 579888876543 2234456669999999999995 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh----c--
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----N-- 248 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~----~-- 248 (778)
++........ ......++..|+|||++.+ ..++.++|+|||||++|||++|..||...... .
T Consensus 147 ~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~ 214 (323)
T cd05615 147 MCKEHMVDGV------TTRTFCGTPDYIAPEIIAY------QPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIM 214 (323)
T ss_pred cccccCCCCc------cccCccCCccccCHHHHcC------CCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9876433211 1112234568999999876 35678999999999999999999998643211 1
Q ss_pred ------cCCCCcchHHHHHHHhccCCCCCCCh-----HHHHhcc
Q 004025 249 ------TASIPKSLLPDYQRLLSSMPSRRLNS-----SKLIENS 281 (778)
Q Consensus 249 ------~~~iP~~L~~~i~~lL~~dP~~Rps~-----~~lL~~~ 281 (778)
...++..+.+++.+||..+|.+|++. .++++|+
T Consensus 215 ~~~~~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~ 258 (323)
T cd05615 215 EHNVSYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHA 258 (323)
T ss_pred hCCCCCCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCc
Confidence 12456667888999999999999974 6788887
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-30 Score=300.05 Aligned_cols=257 Identities=16% Similarity=0.218 Sum_probs=185.3
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCC-cEEEEEEe--------------CC-CCchhHHHHHHHHHHHHhcCCCCCe
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGS-PVSIFSIS--------------GT-NAQDGHLAAARNGVKRLRTVRHPNI 81 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~-~VaIK~~~--------------~~-~~~~~~~~~~~~ev~~Lk~LrHPnI 81 (778)
..|++.++||.|+ | +||.|..+.... .+++|.+. +. .........+.+|+.+|++|+||||
T Consensus 148 ~~Y~ii~~LG~G~fG--~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 148 AHFRVIDDLPAGAFG--KIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hccEEEeEecCCCCc--ceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 4699999999998 8 899987654322 22222111 11 0111234567899999999999999
Q ss_pred eeEeeeeEecccccCCcccEEEEEecCC-cChHHHHHHhCcCC--CcchHHHHHHHHHHHHHHHHHHcCCCccccccCCC
Q 004025 82 LAFLHSTEVENIDATSTKITIYIVTEPV-MPLSEKIKELGLEG--SQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLS 158 (778)
Q Consensus 82 lk~~d~~e~e~~~g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~--~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~ 158 (778)
++++++++.+ ...|+|+|++ ..|..++....... ......+..++.||+.||.|||+ .+|+||||||+
T Consensus 226 v~l~~~~~~~--------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~-~gIiHrDLKP~ 296 (501)
T PHA03210 226 LKIEEILRSE--------ANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHD-KKLIHRDIKLE 296 (501)
T ss_pred CcEeEEEEEC--------CeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHH
Confidence 9999999874 3789999999 56877776543211 11123344569999999999995 89999999999
Q ss_pred CeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCC
Q 004025 159 SVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM 238 (778)
Q Consensus 159 NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~ 238 (778)
|||++.+|.+||+|||++..+..... ...+.+.++..|++||++.+ ..++.++|+|||||++|||++|.
T Consensus 297 NILl~~~~~vkL~DFGla~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvil~ell~~~ 365 (501)
T PHA03210 297 NIFLNCDGKIVLGDFGTAMPFEKERE-----AFDYGWVGTVATNSPEILAG------DGYCEITDIWSCGLILLDMLSHD 365 (501)
T ss_pred HEEECCCCCEEEEeCCCceecCcccc-----cccccccCCcCCCCchhhcC------CCCCcHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999987754211 11223456679999999876 35778999999999999999986
Q ss_pred CC-CCh------hhhhc----------------------------------------cCCCCcchHHHHHHHhccCCCCC
Q 004025 239 RL-SKT------EELRN----------------------------------------TASIPKSLLPDYQRLLSSMPSRR 271 (778)
Q Consensus 239 ~p-~~~------~~l~~----------------------------------------~~~iP~~L~~~i~~lL~~dP~~R 271 (778)
.+ +.. .++.. ...+|..+.+++.+||+.||++|
T Consensus 366 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~R 445 (501)
T PHA03210 366 FCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLR 445 (501)
T ss_pred CCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccC
Confidence 43 211 00000 01244455666889999999999
Q ss_pred CChHHHHhcccCCccccccccchhhhhhHHhhhc
Q 004025 272 LNSSKLIENSVGDFWMTEYFQNKLVDTIHFMEIL 305 (778)
Q Consensus 272 ps~~~lL~~~~~~~w~~~ff~n~lv~~~~~Le~l 305 (778)
|++.++|.|+ ||.....+.+.++..+
T Consensus 446 psa~elL~hp--------~f~~~~~~~~~~~~~~ 471 (501)
T PHA03210 446 PGAAELLALP--------LFSAEEEEEILFIHGL 471 (501)
T ss_pred cCHHHHhhCh--------hhhcCCchHHHHHHhh
Confidence 9999999997 7776555555554443
|
|
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.1e-30 Score=270.34 Aligned_cols=250 Identities=18% Similarity=0.223 Sum_probs=192.1
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~ 94 (778)
...+|++.+.++.|. | +||.|+++.+++.|++|++..... ..+.+.+|+..++++ .||||+++++.+......
T Consensus 4 ~~~~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 78 (275)
T cd06608 4 PTGIFELVEVIGEGTYG--KVYKARHKKTGQLVAIKIMDIIED---EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPP 78 (275)
T ss_pred chhheeheeeecCCCCe--EEEEEEECCCCcEEEEEEEecCch---hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCC
Confidence 346799999999997 7 899999999999999999986432 245688999999999 699999999999764310
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhC-cCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELG-LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~-~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
.....+|+||||+ ++|.+++.... .........+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+
T Consensus 79 --~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~-~~i~H~~l~p~ni~~~~~~~~~l~ 155 (275)
T cd06608 79 --GNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHE-NKVIHRDIKGQNILLTKNAEVKLV 155 (275)
T ss_pred --CcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhc-CCcccCCCCHHHEEEccCCeEEEC
Confidence 0134799999999 47888876533 11223455577789999999999995 899999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hh
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LR 247 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~ 247 (778)
|||++......... .....+...|+|||++...... ...++.++|+|||||+||+|++|..||.... +.
T Consensus 156 d~~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~-~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~ 228 (275)
T cd06608 156 DFGVSAQLDSTLGR------RNTFIGTPYWMAPEVIACDEQP-DASYDARSDVWSLGITAIELADGKPPLCDMHPMRALF 228 (275)
T ss_pred CCccceecccchhh------hcCccccccccCHhHhcccccc-cCCccccccHHHhHHHHHHHHhCCCCccccchHHHHH
Confidence 99998765432111 1112344579999987542111 1345678999999999999999998875321 11
Q ss_pred c-----------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 N-----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ~-----------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ...++..+.+++++||..||.+||++.++++|+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~ 273 (275)
T cd06608 229 KIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHP 273 (275)
T ss_pred HhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCC
Confidence 1 112455788999999999999999999999998
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.1e-30 Score=272.54 Aligned_cols=239 Identities=15% Similarity=0.208 Sum_probs=186.6
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~ 99 (778)
|++.+.+|.|. | .||+|.++.++..+++|.+.... ....+.+.+|+++++.++||||+++++.+..+
T Consensus 7 ~~i~~~lg~g~~g--~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~-------- 74 (282)
T cd06643 7 WEIIGELGDGAFG--KVYKAQNKETGVLAAAKVIDTKS--EEELEDYMVEIDILASCDHPNIVKLLDAFYYE-------- 74 (282)
T ss_pred HHHHhhcccCCCe--EEEEEEECCCCeEEEEEEeCCCC--HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeC--------
Confidence 78889999987 7 99999999999999999997542 33456788999999999999999999999864
Q ss_pred cEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 100 ~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
...|+|+||+ +.|..++..... ......+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++.
T Consensus 75 ~~~~~v~e~~~~~~l~~~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH~-~~i~H~dlkp~nili~~~~~~kl~dfg~~~ 151 (282)
T cd06643 75 NNLWILIEFCAGGAVDAVMLELER--PLTEPQIRVVCKQTLEALNYLHE-NKIIHRDLKAGNILFTLDGDIKLADFGVSA 151 (282)
T ss_pred CEEEEEEEecCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCcccEEEccCCCEEEccccccc
Confidence 3899999999 467777654321 12234456669999999999995 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----h------
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R------ 247 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~------ 247 (778)
........ .....++..|++||++..... ....++.++|+|||||++|||++|++||..... .
T Consensus 152 ~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~-~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~ 224 (282)
T cd06643 152 KNTRTIQR------RDSFIGTPYWMAPEVVMCETS-KDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSE 224 (282)
T ss_pred cccccccc------cccccccccccCHhhccccCC-CCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcC
Confidence 65332110 111234458999999753210 113456789999999999999999988753211 0
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -----~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|..+.+++.+||+.+|.+||++.++++|+
T Consensus 225 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 263 (282)
T cd06643 225 PPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHP 263 (282)
T ss_pred CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCC
Confidence 0123566789999999999999999999999998
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.3e-30 Score=268.89 Aligned_cols=236 Identities=17% Similarity=0.221 Sum_probs=192.8
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.+|.|+ | .||+|+++.+++.|+||++...... .....+.+|++.++.++||||+++++.+...
T Consensus 2 ~~~~~~~i~~g~~~--~v~~~~~~~~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 71 (264)
T cd06623 2 DLERVKVLGQGSSG--VVYKVRHKPTGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCESPYVVKCYGAFYKE------- 71 (264)
T ss_pred cceeeeeeeecCCe--EEEEEEEcCCCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEccC-------
Confidence 689999999987 7 8999999999999999999875432 3466789999999999999999999999864
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|+||||+ ++|.+++..... .....+..++.||+.||.|||+..+++||||+|+||+++.+|.++|+|||++
T Consensus 72 -~~~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~ 147 (264)
T cd06623 72 -GEISIVLEYMDGGSLADLLKKVGK---IPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGIS 147 (264)
T ss_pred -CeEEEEEEecCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccc
Confidence 4899999999 579999876532 2344566679999999999993389999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-------hhc-
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-------LRN- 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-------l~~- 248 (778)
.......... ........|+|||.+.+ ..++.++|+|+||+++|+|++|..|+.... ...
T Consensus 148 ~~~~~~~~~~------~~~~~~~~y~~pE~~~~------~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~ 215 (264)
T cd06623 148 KVLENTLDQC------NTFVGTVTYMSPERIQG------ESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAI 215 (264)
T ss_pred eecccCCCcc------cceeecccccCHhhhCC------CCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHH
Confidence 8775432111 11233458999999876 356778999999999999999998875442 110
Q ss_pred --------cCC-CCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 --------TAS-IPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 --------~~~-iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
... +|..+.+++++||..+|..||++.++++|+
T Consensus 216 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~ 257 (264)
T cd06623 216 CDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHP 257 (264)
T ss_pred hcCCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCH
Confidence 122 677799999999999999999999999998
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-30 Score=272.85 Aligned_cols=239 Identities=18% Similarity=0.164 Sum_probs=184.2
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEEC---CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSK---DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k---~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~ 92 (778)
...+|++.+.||.|+ | .||+|+.+ ..+..|+||.+..... ......+.+|+..+++++||||+++++.+...
T Consensus 3 ~~~~~~~~~~ig~G~fg--~V~~~~~~~~~~~~~~vaik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~- 78 (266)
T cd05064 3 DNKSIKIERILGTGRFG--ELCRGCLKLPSKRELPVAIHTLRAGCS-DKQRRGFLAEALTLGQFDHSNIVRLEGVITRG- 78 (266)
T ss_pred chHHeEEeeeecccCCC--eEEEEEEecCCCceeeEEEEecCCCCC-HHHHHHHHHHHHHHhcCCCCCcCeEEEEEecC-
Confidence 456799999999998 8 89999875 3467899999876432 23345688999999999999999999998753
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEE
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
..+||||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.++.+||
T Consensus 79 -------~~~~lv~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~~i~~al~~lH~-~~iiH~dikp~nili~~~~~~~l 148 (266)
T cd05064 79 -------NTMMIVTEYMSNGALDSFLRKHEG--QLVAGQLMGMLPGLASGMKYLSE-MGYVHKGLAAHKVLVNSDLVCKI 148 (266)
T ss_pred -------CCcEEEEEeCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHH-CCEeeccccHhhEEEcCCCcEEE
Confidence 4899999999 468888876431 12234456669999999999995 99999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhh----
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE---- 245 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~---- 245 (778)
+|||.+....... .........+..|+|||.+.+ ..++.++|+|||||++||+++ |..||....
T Consensus 149 ~dfg~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~ 217 (266)
T cd05064 149 SGFRRLQEDKSEA-----IYTTMSGKSPVLWAAPEAIQY------HHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDV 217 (266)
T ss_pred CCCcccccccccc-----hhcccCCCCceeecCHHHHhh------CCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHH
Confidence 9999876543211 011111122347999999875 356789999999999999875 888875321
Q ss_pred hh---------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 246 LR---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 246 l~---------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
+. ....+|..+.+++.+|+..+|..||++.++++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~ 261 (266)
T cd05064 218 IKAVEDGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSI 261 (266)
T ss_pred HHHHHCCCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHH
Confidence 11 113456778899999999999999999988763
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-30 Score=275.14 Aligned_cols=236 Identities=14% Similarity=0.191 Sum_probs=188.6
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
|++.+.||.|+ | +||.+.++.+++.|+||.+....... .....+.+|+.+++.++||+|+++++.+.++
T Consensus 2 f~~~~~ig~G~~g--~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~------- 72 (285)
T cd05630 2 FRQYRVLGKGGFG--EVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETK------- 72 (285)
T ss_pred ceeeEEeecCCCe--EEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecC-------
Confidence 78888999998 8 89999999999999999998653322 2345577899999999999999999999864
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|+||||+ ++|.+++....... .....+..++.|++.||.|||+ .+++||||||+||+++.++.++|+|||++
T Consensus 73 -~~~~lv~e~~~g~~L~~~l~~~~~~~-l~~~~~~~~~~qi~~~l~~lH~-~~iiH~dikp~Nil~~~~~~~~l~Dfg~~ 149 (285)
T cd05630 73 -DALCLVLTLMNGGDLKFHIYHMGEAG-FEEGRAVFYAAEICCGLEDLHQ-ERIVYRDLKPENILLDDHGHIRISDLGLA 149 (285)
T ss_pred -CEEEEEEEecCCCcHHHHHHHhcccC-CCHHHHHHHHHHHHHHHHHHHh-CCEEeCCCCHHHEEECCCCCEEEeeccce
Confidence 3899999999 47988886543222 2233455668999999999995 99999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-------hhc-
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-------LRN- 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-------l~~- 248 (778)
........ .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||.... ...
T Consensus 150 ~~~~~~~~-------~~~~~g~~~y~aPE~~~~------~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~ 216 (285)
T cd05630 150 VHVPEGQT-------IKGRVGTVGYMAPEVVKN------ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERL 216 (285)
T ss_pred eecCCCcc-------ccCCCCCccccChHHHcC------CCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhh
Confidence 76543211 011234568999999876 356788999999999999999999886321 111
Q ss_pred --------cCCCCcchHHHHHHHhccCCCCCCC-----hHHHHhcc
Q 004025 249 --------TASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENS 281 (778)
Q Consensus 249 --------~~~iP~~L~~~i~~lL~~dP~~Rps-----~~~lL~~~ 281 (778)
...++..+.+++++||+.+|..|++ +.++++|+
T Consensus 217 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~ 262 (285)
T cd05630 217 VKEVQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHP 262 (285)
T ss_pred hhhhhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcCh
Confidence 1246677889999999999999999 89999998
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5e-30 Score=271.08 Aligned_cols=248 Identities=17% Similarity=0.232 Sum_probs=190.9
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEeccccc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~g 95 (778)
...|++.+.+|.|+ | .||+|..+.+++.|+||++...... ...+.+|+..++.+ +||||+++++.+..+...
T Consensus 5 ~~~y~~~~~lg~g~~g--~vy~~~~~~~~~~~aik~~~~~~~~---~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~- 78 (272)
T cd06637 5 AGIFELVELVGNGTYG--QVYKGRHVKTGQLAAIKVMDVTGDE---EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP- 78 (272)
T ss_pred hhhhhHHHheeecCCe--EEEEEEEcCCCcEEEEEEEEcCCcc---HHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCC-
Confidence 34699999999998 8 8999999999999999999865322 34678899999998 699999999998764321
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
+....+|+||||+ ++|.+++..... .......+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+||
T Consensus 79 -~~~~~~~iv~e~~~~~~L~~~l~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~-~~ivh~dl~~~nili~~~~~~~l~Df 155 (272)
T cd06637 79 -GMDDQLWLVMEFCGAGSVTDLIKNTKG-NTLKEEWIAYICREILRGLSHLHQ-HKVIHRDIKGQNVLLTENAEVKLVDF 155 (272)
T ss_pred -CCCcEEEEEEEcCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHH-CCCccCCCCHHHEEECCCCCEEEccC
Confidence 1124799999999 479888876432 122344566679999999999996 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------- 246 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l------- 246 (778)
|++......... .....+...|+|||++.+.-. ....++.++|+|||||++|||++|..||.....
T Consensus 156 g~~~~~~~~~~~------~~~~~g~~~y~aPE~~~~~~~-~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~ 228 (272)
T cd06637 156 GVSAQLDRTVGR------RNTFIGTPYWMAPEVIACDEN-PDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI 228 (272)
T ss_pred CCceeccccccc------CCcccccccccCHhHhccccC-cCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHH
Confidence 998765432110 111233457999999863210 113466789999999999999999988743210
Q ss_pred -h------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 -R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 -~------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ....+|..+.+++.+||..+|.+||++.++++|+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~ 270 (272)
T cd06637 229 PRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHP 270 (272)
T ss_pred hcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCC
Confidence 0 0124677899999999999999999999999998
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.1e-30 Score=270.18 Aligned_cols=241 Identities=16% Similarity=0.230 Sum_probs=187.4
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc----hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ----DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~----~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
+|++++.+|.|. | +||+|.. .+|+.++||.+..+... ......+.+|+..|+.++||||+++++.+...
T Consensus 1 ~~~~~~~ig~g~~~--~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--- 74 (265)
T cd06631 1 EWTKGEVLGKGAYG--TVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDD--- 74 (265)
T ss_pred CccccceEeccCCe--EEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecC---
Confidence 488999999987 7 8999986 47899999998754322 23456789999999999999999999999864
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+|+|+||+ ++|.+++.+... .....+..++.||+.||.|||+ .+++|+||+|+||+++.+|.+||+|
T Consensus 75 -----~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~nil~~~~~~~~l~d 145 (265)
T cd06631 75 -----NTISIFMEFVPGGSISSILNRFGP---LPEPVFCKYTKQILDGVAYLHN-NCVVHRDIKGNNVMLMPNGIIKLID 145 (265)
T ss_pred -----CeEEEEEecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCcccCCcCHHhEEECCCCeEEecc
Confidence 3899999999 479999876542 2244456679999999999995 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hh-
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LR- 247 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~- 247 (778)
||++....................+...|+|||++.+ ..++.++|+|||||++|+|++|..||.... ..
T Consensus 146 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~------~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~ 219 (265)
T cd06631 146 FGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINE------SGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFY 219 (265)
T ss_pred chhhHhhhhccccccccccccccCCCccccChhhhcC------CCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHH
Confidence 9998865432111000000112234458999999876 356678999999999999999998875311 00
Q ss_pred ------c----cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ------N----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ------~----~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ...++..+..++++||..+|.+||++.++++|+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~ 263 (265)
T cd06631 220 IGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHD 263 (265)
T ss_pred hhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCC
Confidence 0 123455688899999999999999999999997
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.3e-31 Score=261.60 Aligned_cols=256 Identities=16% Similarity=0.182 Sum_probs=203.3
Q ss_pred CCCCCceeccCCCCCCCceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 16 VKDLPYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
+.+.+|.|.+.+|.|++. -||.++.-.++..+|+|++...+ .+..+.+++|++..|+++||||+++++....+..|+
T Consensus 18 In~~Ryri~~~LgeGGfs-fv~LV~~~s~~~~YAlKkI~c~~--~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~ 94 (302)
T KOG2345|consen 18 INNKRYRIQRLLGEGGFS-FVDLVKGLSTGHLYALKKILCHS--QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDG 94 (302)
T ss_pred EcCceEEEeeeecCCCce-eeeeecccCcccchhhheeeccc--hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccC
Confidence 456789999999999833 69999999999999999998765 345678999999999999999999999887655443
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCC-CcchHHHHHHHHHHHHHHHHHHcCCC--ccccccCCCCeEEcCCCcEEE
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEG-SQRDEYYAWGLNQIAKAVSFLNNDCK--LVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~-~~~~~~i~~gl~QI~~aL~fLH~~~~--ivH~dLkp~NI~v~~~g~~KL 170 (778)
+...||++.|. ++|.+.|......+ ...+..+.|++.+|++||++||. .. +.||||||.||+++..|..+|
T Consensus 95 ---~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~-~~~~yAH~DiKP~NILls~~~~~vl 170 (302)
T KOG2345|consen 95 ---KHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHE-KEPPYAHRDIKPANILLSDSGLPVL 170 (302)
T ss_pred ---ceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhc-cCCcccccCCCcceeEecCCCceEE
Confidence 57899999999 78999999887666 34455688889999999999995 66 999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccc---cccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYA---WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL- 246 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~---~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l- 246 (778)
+|||.++...-.-........... -.++..|+|||++.-. .....+.++|||||||++|+|+.|..||+..--
T Consensus 171 ~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk---~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~ 247 (302)
T KOG2345|consen 171 MDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVK---SHCTITERTDIWSLGCTLYAMMFGESPFERIYQQ 247 (302)
T ss_pred EeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecc---cCcccccccchhhhhHHHHHHHHcCCcchHHhhc
Confidence 999998765432111111111111 2345689999997632 113567899999999999999999999864211
Q ss_pred ---------------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 ---------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ---------------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.+...++..+.++++.||+.||.+||++.+++.+-
T Consensus 248 GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~ 297 (302)
T KOG2345|consen 248 GGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKL 297 (302)
T ss_pred CCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHH
Confidence 11234677899999999999999999999998763
|
|
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-30 Score=283.86 Aligned_cols=243 Identities=13% Similarity=0.121 Sum_probs=187.3
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.||.|+ | +||.++.+.+++.|+||++.+... .......+++|+.+++.++||+|+++++.++.+
T Consensus 2 ~y~~~~~lG~G~fg--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------ 73 (332)
T cd05623 2 DFEILKVIGRGAFG--EVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDE------ 73 (332)
T ss_pred CceEEEEEEeCCCe--EEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecC------
Confidence 699999999998 8 999999999999999999975321 123344578899999999999999999999864
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+|+||||+ ++|.+++.+... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~ey~~~g~L~~~l~~~~~--~l~~~~~~~~~~qi~~al~~lH~-~~iiHrDlkp~Nili~~~~~~kL~DfG~ 148 (332)
T cd05623 74 --NNLYLVMDYYVGGDLLTLLSKFED--RLPEDMARFYLAEMVIAIDSVHQ-LHYVHRDIKPDNILMDMNGHIRLADFGS 148 (332)
T ss_pred --CEEEEEEeccCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHEEECCCCCEEEeecch
Confidence 4899999999 689999976432 12334456669999999999995 9999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----hc---
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN--- 248 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~~--- 248 (778)
+..+..... .......++..|+|||++.+.-. ....++.++|+|||||++|||++|..||..... ..
T Consensus 149 a~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~-~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~ 222 (332)
T cd05623 149 CLKLMEDGT-----VQSSVAVGTPDYISPEILQAMED-GKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 222 (332)
T ss_pred heecccCCc-----ceecccccCccccCHHHHhcccc-CCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhC
Confidence 876543211 11112245568999999863110 013467799999999999999999998864321 00
Q ss_pred ----------cCCCCcchHHHHHHHhccCCCC--CCChHHHHhcc
Q 004025 249 ----------TASIPKSLLPDYQRLLSSMPSR--RLNSSKLIENS 281 (778)
Q Consensus 249 ----------~~~iP~~L~~~i~~lL~~dP~~--Rps~~~lL~~~ 281 (778)
...+++.+.+++++||..++.+ |+++.++++|+
T Consensus 223 ~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~ 267 (332)
T cd05623 223 HKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHP 267 (332)
T ss_pred CCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCC
Confidence 1235667888899998665444 78999999998
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.1e-30 Score=272.59 Aligned_cols=242 Identities=17% Similarity=0.204 Sum_probs=190.7
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
..+|++.+++|.|. | +||+|+.+.++..|++|.+... .....+.+.+|+++++.++||||+++++.+..+
T Consensus 4 ~~~~~i~~~l~~g~~~--~v~~~~~~~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 74 (280)
T cd06611 4 NDIWEIIGELGDGAFG--KVYKAQHKETGLFAAAKIIQIE--SEEELEDFMVEIDILSECKHPNIVGLYEAYFYE----- 74 (280)
T ss_pred hhHHHHHHHhcCCCCc--eEEEEEEcCCCcEEEEEEEeeC--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecC-----
Confidence 45699999999998 8 8999999989999999999754 233456788999999999999999999999863
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+|+||||+ +.|..++..... ......+..++.|++.||.|||+ .+++|+||+|+||+++.+|.+||+|||
T Consensus 75 ---~~~~lv~e~~~~~~L~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh~-~~i~h~dl~p~nili~~~~~~~l~d~g 148 (280)
T cd06611 75 ---NKLWILIEFCDGGALDSIMLELER--GLTEPQIRYVCRQMLEALNFLHS-HKVIHRDLKAGNILLTLDGDVKLADFG 148 (280)
T ss_pred ---CeEEEEeeccCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCChhhEEECCCCCEEEccCc
Confidence 4899999999 478888876432 12334566779999999999995 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh-------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------- 247 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------- 247 (778)
++......... ......+..|++||++..... ....++.++|+|||||++|||++|.+||......
T Consensus 149 ~~~~~~~~~~~------~~~~~~~~~y~~PE~~~~~~~-~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 221 (280)
T cd06611 149 VSAKNKSTLQK------RDTFIGTPYWMAPEVVACETF-KDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKIL 221 (280)
T ss_pred cchhhcccccc------cceeecchhhcCHHHHhhccc-CCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHh
Confidence 87665432111 111234457999999753210 0124567899999999999999999988543211
Q ss_pred --------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 --------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 --------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++.+||..+|.+||++.++++|+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~ 263 (280)
T cd06611 222 KSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHP 263 (280)
T ss_pred cCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcCh
Confidence 0123556788999999999999999999999998
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-30 Score=287.24 Aligned_cols=242 Identities=15% Similarity=0.146 Sum_probs=185.4
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCC-----CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeE
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDD-----GSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTE 89 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~-----g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e 89 (778)
+..+|++++.||.|+ | .||+|++... +..|+||++...... ...+.+.+|+++|+.+ +||||+++++.+.
T Consensus 36 ~~~~~~~~~~LG~G~fg--~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~il~~l~~h~nIv~~~~~~~ 112 (374)
T cd05106 36 PRDNLQFGKTLGAGAFG--KVVEATAFGLGKEDNVLRVAVKMLKASAHT-DEREALMSELKILSHLGQHKNIVNLLGACT 112 (374)
T ss_pred cHHHceehheecCCCcc--cEEEEEEecCCcccccceeEEEeccCCCCH-HHHHHHHHHHHHHHhhccCCceeeEeeEec
Confidence 344699999999998 8 8999986543 357999999765333 3456788999999999 8999999999987
Q ss_pred ecccccCCcccEEEEEecCC--cChHHHHHHhCcC---------------------------------------------
Q 004025 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLE--------------------------------------------- 122 (778)
Q Consensus 90 ~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~--------------------------------------------- 122 (778)
.. ..+|+||||| ++|.+++......
T Consensus 113 ~~--------~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (374)
T cd05106 113 HG--------GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEM 184 (374)
T ss_pred CC--------CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhccccccccccccccccccccc
Confidence 63 3799999999 6899888653210
Q ss_pred ----------------------CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccC
Q 004025 123 ----------------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (778)
Q Consensus 123 ----------------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~ 180 (778)
.......+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||+++.+.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~-~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~ 263 (374)
T cd05106 185 RPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLAS-KNCIHRDVAARNVLLTDGRVAKICDFGLARDIM 263 (374)
T ss_pred CCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHH-CCEEeccCchheEEEeCCCeEEEeeceeeeecc
Confidence 011223456679999999999996 899999999999999999999999999998764
Q ss_pred CCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh------------
Q 004025 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR------------ 247 (778)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~------------ 247 (778)
..... ........+..|+|||++.+ ..++.++|+|||||++|||++ |..||......
T Consensus 264 ~~~~~----~~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~ 333 (374)
T cd05106 264 NDSNY----VVKGNARLPVKWMAPESIFD------CVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQ 333 (374)
T ss_pred CCcce----eeccCCCCccceeCHHHhcC------CCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccC
Confidence 32110 00001112347999999865 357789999999999999997 88887532110
Q ss_pred --ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 --NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 --~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+|..+.+++.+||+.+|..||++.++++.
T Consensus 334 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~ 368 (374)
T cd05106 334 MSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQL 368 (374)
T ss_pred ccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 012357789999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5e-30 Score=269.78 Aligned_cols=228 Identities=17% Similarity=0.237 Sum_probs=184.3
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEEE
Q 004025 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104 (778)
Q Consensus 27 lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~lyI 104 (778)
+|.|. | .||.|+.+.+++.|+||++.+.... ....+.+.+|+++++.++||||+++++.++.+ ..+|+
T Consensus 1 lg~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--------~~~~l 70 (262)
T cd05572 1 LGVGGFG--RVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDK--------KYIYM 70 (262)
T ss_pred CCCCCce--EEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcC--------CccEE
Confidence 45666 6 8999999999999999999865432 23456789999999999999999999998763 48999
Q ss_pred EecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCCC
Q 004025 105 VTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGN 182 (778)
Q Consensus 105 VtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~ 182 (778)
|+||+ ++|.+++.+... .....+.+++.||+.||.|||+ .+++|+||+|+||+++.+|.+||+|||++......
T Consensus 71 v~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~~i~~~l~~lH~-~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~ 146 (262)
T cd05572 71 LMEYCLGGELWTILRDRGL---FDEYTARFYIACVVLAFEYLHN-RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSG 146 (262)
T ss_pred EEecCCCCcHHHHHhhcCC---CCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcc
Confidence 99998 579999876543 2344566779999999999995 99999999999999999999999999999877543
Q ss_pred CCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh------hh------cc-
Q 004025 183 NEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE------LR------NT- 249 (778)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~------l~------~~- 249 (778)
. ..........|++||.+.+ ..++.++|+|+|||++|+|++|..||.... .. ..
T Consensus 147 ~-------~~~~~~~~~~~~~PE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 213 (262)
T cd05572 147 Q-------KTWTFCGTPEYVAPEIILN------KGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKL 213 (262)
T ss_pred c-------ccccccCCcCccChhHhcC------CCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCC
Confidence 1 1112234558999999765 356778999999999999999998875332 11 11
Q ss_pred ---CCCCcchHHHHHHHhccCCCCCCC-----hHHHHhcc
Q 004025 250 ---ASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENS 281 (778)
Q Consensus 250 ---~~iP~~L~~~i~~lL~~dP~~Rps-----~~~lL~~~ 281 (778)
..++..+.+++.+||..+|..|++ +.++++|+
T Consensus 214 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~ 253 (262)
T cd05572 214 EFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHK 253 (262)
T ss_pred CCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcCh
Confidence 134567899999999999999999 99999998
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=274.28 Aligned_cols=239 Identities=15% Similarity=0.145 Sum_probs=189.1
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
+...|++.+.+|.|. | +||.|+.+.+|+.|+||++...... ......+.+|+.+++.++||||+++++++..+
T Consensus 13 ~~~~y~~~~~lg~g~~g--~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~--- 87 (307)
T cd06607 13 PEKLFTDLREIGHGSFG--AVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLRE--- 87 (307)
T ss_pred cchhhhhheeecCCCCe--EEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeC---
Confidence 456699999999997 7 9999999999999999998754322 23456688999999999999999999999864
Q ss_pred cCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 95 ATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 95 g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
...|+|+||+ +.|.+++..... ......+.+++.||+.||.|||+ .+++||||+|+||+++.+|.+||+||
T Consensus 88 -----~~~~lv~e~~~g~l~~~~~~~~~--~l~~~~~~~~~~ql~~~L~~LH~-~~i~H~dl~p~nIl~~~~~~~kL~df 159 (307)
T cd06607 88 -----HTAWLVMEYCLGSASDILEVHKK--PLQEVEIAAICHGALQGLAYLHS-HERIHRDIKAGNILLTEPGTVKLADF 159 (307)
T ss_pred -----CeEEEEHHhhCCCHHHHHHHccc--CCCHHHHHHHHHHHHHHHHHHHH-CCceecCCCcccEEECCCCCEEEeec
Confidence 3789999999 577777654322 12344566779999999999995 99999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------ 247 (778)
|++....... ...+...|+|||++.+.- ...++.++|+|||||++|||++|.+|+......
T Consensus 160 g~~~~~~~~~----------~~~~~~~y~aPE~~~~~~---~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~ 226 (307)
T cd06607 160 GSASLVSPAN----------SFVGTPYWMAPEVILAMD---EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI 226 (307)
T ss_pred CcceecCCCC----------CccCCccccCceeeeccC---CCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHH
Confidence 9886553311 112345799999875310 134667899999999999999999887532210
Q ss_pred ---cc-----CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ---NT-----ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ---~~-----~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. ..++..+..++.+||+.+|.+||++.+++.|+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 268 (307)
T cd06607 227 AQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHR 268 (307)
T ss_pred hcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence 01 12456788999999999999999999999997
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.3e-30 Score=267.66 Aligned_cols=243 Identities=17% Similarity=0.261 Sum_probs=193.2
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|.+.+.||.|+ | .||.|+...++..|+||.+............+.+|+.+++.++||||+++++.+...
T Consensus 1 ~y~~~~~lg~G~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~------- 71 (264)
T cd06626 1 RWQRGNKIGGGTFG--KVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHR------- 71 (264)
T ss_pred CceeeeEeecCCCc--EEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecC-------
Confidence 589999999997 7 899999999999999999987655445677899999999999999999999988753
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|+|+||+ ++|.+++...... ....+.+++.||+.||.|||+ .+++|+||+|+||+++.++.+||+|||++
T Consensus 72 -~~~~lv~e~~~~~~L~~~~~~~~~~---~~~~~~~i~~~i~~~l~~lh~-~~i~H~dl~~~nil~~~~~~~kl~d~g~~ 146 (264)
T cd06626 72 -EKVYIFMEYCSGGTLEELLEHGRIL---DEHVIRVYTLQLLEGLAYLHS-HGIVHRDIKPANIFLDHNGVIKLGDFGCA 146 (264)
T ss_pred -CEEEEEEecCCCCcHHHHHhhcCCC---ChHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCCCEEEcccccc
Confidence 4899999999 5799988765432 234466679999999999995 99999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh--h------h-
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE--L------R- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~--l------~- 247 (778)
........... .. .........|+|||++.+.. ...+..++|+|+|||++|++++|..||.... . .
T Consensus 147 ~~~~~~~~~~~-~~-~~~~~~~~~~~~PE~~~~~~---~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~ 221 (264)
T cd06626 147 VKLKNNTTTMG-EE-VQSLAGTPAYMAPEVITGGK---GKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA 221 (264)
T ss_pred cccCCCCCccc-cc-ccCCcCCcCccChhhccCCC---CCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc
Confidence 87755322111 00 01123345899999987631 1236789999999999999999998885321 0 0
Q ss_pred -------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++++||+.+|.+||++.+++.|+
T Consensus 222 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~ 262 (264)
T cd06626 222 GHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHP 262 (264)
T ss_pred CCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcCC
Confidence 0112356678999999999999999999999997
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.3e-30 Score=270.29 Aligned_cols=241 Identities=14% Similarity=0.197 Sum_probs=185.7
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc---hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ---DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~---~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
.+|++++.+|.|+ | .||.|.++.+|..|+||.+...... ....+.+.+|++.++.++||||+++++++.+..
T Consensus 2 ~~~~~~~~l~~g~~g--~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 77 (265)
T cd06652 2 TNWRLGKLLGQGAFG--RVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPM-- 77 (265)
T ss_pred CcceEeeEEecCCce--EEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCC--
Confidence 4699999999998 8 8999999999999999998643221 234567889999999999999999999887543
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
...+|++|||+ ++|.+++...... ....+..++.||+.||.|||+ .+++|+||+|+||+++.+|.+||+|
T Consensus 78 ----~~~~~~v~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~~l~~~l~~lH~-~~i~H~dl~p~nil~~~~~~~~l~D 149 (265)
T cd06652 78 ----ERTLSIFMEHMPGGSIKDQLKSYGAL---TENVTRKYTRQILEGVSYLHS-NMIVHRDIKGANILRDSVGNVKLGD 149 (265)
T ss_pred ----CceEEEEEEecCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEecCCCCEEECc
Confidence 24789999999 4799988765432 233455669999999999995 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hhc
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRN 248 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~~ 248 (778)
||++........... . .....+...|+|||++.+ ...+.++|+|||||++|||++|..||.... ...
T Consensus 150 fg~~~~~~~~~~~~~-~--~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~ 220 (265)
T cd06652 150 FGASKRLQTICLSGT-G--MKSVTGTPYWMSPEVISG------EGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFK 220 (265)
T ss_pred Ccccccccccccccc-c--cccCCCCccccChhhhcC------CCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHH
Confidence 999886643211100 0 011123458999999865 345678999999999999999998875321 110
Q ss_pred ------cCCCC----cchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ------TASIP----KSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ------~~~iP----~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+| ..+..++.+|+. +|++||+++++++|+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~ 262 (265)
T cd06652 221 IATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHT 262 (265)
T ss_pred HhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCc
Confidence 11223 345677888884 899999999999998
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-30 Score=268.88 Aligned_cols=238 Identities=20% Similarity=0.285 Sum_probs=189.8
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.++.|+ | .||+|+.+.+|..|++|.+..........+.+++|+.+++.++||||+++++.++..
T Consensus 1 ~~~~~~~l~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~------- 71 (257)
T cd08225 1 RYEIIKKIGEGSFG--KIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQEN------- 71 (257)
T ss_pred CceEEEEecCCCcc--eEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccC-------
Confidence 589999999987 7 899999999999999999986533333456788999999999999999999998764
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCc-EEEEeccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD-WKLHAFDV 175 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~-~KL~dFgl 175 (778)
..+|+|+||+ ++|.+++...... ......+..++.||+.||.|||+ .+++|+||+|+||++++++. +||+|||+
T Consensus 72 -~~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~-~~i~H~dl~~~nil~~~~~~~~~l~d~~~ 148 (257)
T cd08225 72 -GRLFIVMEYCDGGDLMKRINRQRGV-LFSEDQILSWFVQISLGLKHIHD-RKILHRDIKSQNIFLSKNGMVAKLGDFGI 148 (257)
T ss_pred -CeEEEEEecCCCCcHHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHH-CCcccccCCHHHEEEcCCCCeEEeccccc
Confidence 3899999999 4798888764321 12344466679999999999995 99999999999999998865 69999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc-------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------- 248 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~------- 248 (778)
+.......... ....+...|+|||+..+. .++.++|+|||||++|+|++|..|+.......
T Consensus 149 ~~~~~~~~~~~------~~~~~~~~~~ape~~~~~------~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 216 (257)
T cd08225 149 ARQLNDSMELA------YTCVGTPYYLSPEICQNR------PYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQ 216 (257)
T ss_pred chhccCCcccc------cccCCCccccCHHHHcCC------CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhc
Confidence 88765422111 111244579999987652 46678999999999999999998876432110
Q ss_pred ------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++.+|+..+|.+||++.++++|+
T Consensus 217 ~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~ 255 (257)
T cd08225 217 GYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKRP 255 (257)
T ss_pred ccCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCC
Confidence 123566789999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.9e-30 Score=272.11 Aligned_cols=235 Identities=17% Similarity=0.207 Sum_probs=189.5
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..|++.+++|.|. | .||.|+++.+++.|+||++..+.. ......+.+|++++++++||||+++++.++.+
T Consensus 4 ~~y~~~~~lg~g~~~--~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 74 (277)
T cd06640 4 ELFTKLERIGKGSFG--EVFKGIDNRTQQVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKG------ 74 (277)
T ss_pred HhhhhhhhcccCCCe--EEEEEEEccCCEEEEEEEEecccc-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC------
Confidence 3588889999998 7 899999999999999999986532 33466788999999999999999999999874
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+||||||+ ++|.+++..... ....+.+++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||+
T Consensus 75 --~~~~lv~e~~~~~~L~~~i~~~~l----~~~~~~~~~~~l~~~l~~lh~-~~ivH~dl~p~Nil~~~~~~~~l~dfg~ 147 (277)
T cd06640 75 --TKLWIIMEYLGGGSALDLLRAGPF----DEFQIATMLKEILKGLDYLHS-EKKIHRDIKAANVLLSEQGDVKLADFGV 147 (277)
T ss_pred --CEEEEEEecCCCCcHHHHHhcCCC----CHHHHHHHHHHHHHHHHHHHh-CCccCcCCChhhEEEcCCCCEEEccccc
Confidence 3899999999 478888875432 234466679999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh----c---
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----N--- 248 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~----~--- 248 (778)
+......... .........|+|||++.+ ...+.++|+|||||++|||++|..|+...... .
T Consensus 148 ~~~~~~~~~~------~~~~~~~~~y~apE~~~~------~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~ 215 (277)
T cd06640 148 AGQLTDTQIK------RNTFVGTPFWMAPEVIQQ------SAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPK 215 (277)
T ss_pred ceeccCCccc------cccccCcccccCHhHhcc------CCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhc
Confidence 8776442110 111123447999999875 34667899999999999999999887532110 0
Q ss_pred ------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+|..+.+++.+||..+|..||++.++++|+
T Consensus 216 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 254 (277)
T cd06640 216 NNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHK 254 (277)
T ss_pred CCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhCh
Confidence 123456788899999999999999999999997
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-30 Score=282.99 Aligned_cols=243 Identities=14% Similarity=0.112 Sum_probs=187.3
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.||.|+ | +||.++++.+++.|+||++.+... .......+++|+.+++.++||||+++++.++.+
T Consensus 2 ~y~i~~~lG~G~fg--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~------ 73 (331)
T cd05624 2 DFEIIKVIGRGAFG--EVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDE------ 73 (331)
T ss_pred CceEEEEEeeCCCe--EEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcC------
Confidence 699999999998 8 999999999999999999975321 123345678899999999999999999999864
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
.++||||||+ ++|..++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~Ey~~gg~L~~~l~~~~~--~l~~~~~~~~~~qi~~~L~~lH~-~~iiHrDlkp~Nill~~~~~~kl~DfG~ 148 (331)
T cd05624 74 --NYLYLVMDYYVGGDLLTLLSKFED--RLPEDMARFYIAEMVLAIHSIHQ-LHYVHRDIKPDNVLLDMNGHIRLADFGS 148 (331)
T ss_pred --CEEEEEEeCCCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH-CCeeeccCchHHEEEcCCCCEEEEeccc
Confidence 4899999999 579999976431 12234456668999999999995 9999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh--------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~-------- 247 (778)
+..+...... ......++..|+|||++.+.... ...++.++|+|||||++|||++|..||......
T Consensus 149 a~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~-~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~ 222 (331)
T cd05624 149 CLKMNQDGTV-----QSSVAVGTPDYISPEILQAMEDG-MGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 222 (331)
T ss_pred eeeccCCCce-----eeccccCCcccCCHHHHhccccC-CCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHc
Confidence 8776542211 11112355689999998642110 023567899999999999999999988543211
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCC--CCChHHHHhcc
Q 004025 248 ---------NTASIPKSLLPDYQRLLSSMPSR--RLNSSKLIENS 281 (778)
Q Consensus 248 ---------~~~~iP~~L~~~i~~lL~~dP~~--Rps~~~lL~~~ 281 (778)
....++..+.+++.+||...+.+ |++++++++|+
T Consensus 223 ~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~ 267 (331)
T cd05624 223 HEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHA 267 (331)
T ss_pred CCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCC
Confidence 01234667888899998865544 56899999997
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-30 Score=281.69 Aligned_cols=245 Identities=19% Similarity=0.293 Sum_probs=190.5
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEeccccc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~g 95 (778)
..+|++.+.+|.|+ | .||+|.++.+|+.|+||.+............+.+|+..++++ +||||+++++++....
T Consensus 6 ~~~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~--- 80 (337)
T cd07852 6 LRKYEILQKLGKGAYG--IVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAEN--- 80 (337)
T ss_pred hhHHHHhHhhcCCCCe--eEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCC---
Confidence 45799999999998 8 899999999999999999875433333345677899999999 9999999999987543
Q ss_pred CCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
...+|+||||+ ++|..++..... ......+++.||+.||.|||+ .+++|+||+|+||+++.+|.+||+|||
T Consensus 81 ---~~~~~lv~e~~~~~L~~~~~~~~~----~~~~~~~i~~qi~~~L~~LH~-~~i~H~dl~p~nill~~~~~~kl~d~g 152 (337)
T cd07852 81 ---DKDIYLVFEYMETDLHAVIRANIL----EDVHKRYIMYQLLKALKYIHS-GNVIHRDLKPSNILLNSDCRVKLADFG 152 (337)
T ss_pred ---CceEEEEecccccCHHHHHhcCCC----CHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEEcCCCcEEEeecc
Confidence 34789999999 578888765421 233355669999999999995 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh--------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------- 246 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l-------- 246 (778)
++............+. .....++..|+|||++.+. ...+.++|+|||||++|+|++|.++|....-
T Consensus 153 ~~~~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~-----~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~ 226 (337)
T cd07852 153 LARSLSELEENPENPV-LTDYVATRWYRAPEILLGS-----TRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKII 226 (337)
T ss_pred chhccccccccccCcc-hhcccccccccCceeeecc-----ccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence 9887654321110011 1112345579999987643 3456789999999999999999988742100
Q ss_pred -----------------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 -----------------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 -----------------------------------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....+|..+.+++.+||+.+|.+||++.++++|+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~ 296 (337)
T cd07852 227 EVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHP 296 (337)
T ss_pred HHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhCh
Confidence 00123567788999999999999999999999998
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-29 Score=264.56 Aligned_cols=240 Identities=19% Similarity=0.276 Sum_probs=194.3
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|.+.+.++.|+ | .||+|+++.++..|+||++..........+.+.+|+..+++++||||+++++.+....
T Consensus 1 ~~~~~~~i~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~------ 72 (260)
T cd06606 1 EWTRGELLGRGSFG--SVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEE------ 72 (260)
T ss_pred CceeeeEeeecCce--EEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCC------
Confidence 488889999887 6 9999999999999999999876544455778999999999999999999999998642
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
...+|+|+||+ ++|.+++.... ......+..++.|++.||.|||+ .+++||||+|+||+++.+|.+||+|||++
T Consensus 73 ~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~-~~~~h~dl~p~ni~i~~~~~~~l~d~~~~ 148 (260)
T cd06606 73 KNTLNIFLEYVSGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYLHS-NGIVHRDIKGANILVDSDGVVKLADFGCA 148 (260)
T ss_pred CCeEEEEEEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEEcCCCCEEEcccccE
Confidence 14899999999 46999888764 22344566779999999999996 99999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh--------hh-
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE--------LR- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~--------l~- 247 (778)
.......... ..........|++||...+. ..+.++|+|||||++|+|++|..++.... +.
T Consensus 149 ~~~~~~~~~~----~~~~~~~~~~y~~pE~~~~~------~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 218 (260)
T cd06606 149 KRLGDIETGE----GTGSVRGTPYWMAPEVIRGE------EYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGS 218 (260)
T ss_pred Eecccccccc----cccCCCCCccccCHhhhcCC------CCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccc
Confidence 8776532110 01112334589999998763 46789999999999999999998875432 01
Q ss_pred --c----cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 --N----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 --~----~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ...+|..+.+++.+|+..+|.+||++.++++|+
T Consensus 219 ~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~ 258 (260)
T cd06606 219 SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHP 258 (260)
T ss_pred cCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCC
Confidence 1 123467789999999999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.1e-30 Score=270.87 Aligned_cols=235 Identities=19% Similarity=0.259 Sum_probs=188.8
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC---CCCeeeEeeeeEeccccc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR---HPNILAFLHSTEVENIDA 95 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr---HPnIlk~~d~~e~e~~~g 95 (778)
.|++.+.+|.|+ | .||+|+++.++..|+||.+...... ...+.+.+|+.+++.++ ||||+++++.++.+
T Consensus 2 ~y~~~~~l~~g~~g--~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~---- 74 (277)
T cd06917 2 LYQRLELIGRGAYG--AVYRGKHVPTGRVVALKIINLDTPD-DDVSDIQREVALLSQLRQSQPPNITKYYGSYLKG---- 74 (277)
T ss_pred hhhhhhheeccCCc--eEEEEEEcCCCcEEEEEEecCCCCc-hhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeC----
Confidence 388889999998 8 8999999999999999998764332 34556888999999997 99999999998763
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..+|+||||+ ++|.+++.... .....+..++.||+.||.|||+ .+++||||+|+||+++.+|.++|+||
T Consensus 75 ----~~~~lv~e~~~~~~L~~~~~~~~----l~~~~~~~i~~~i~~~l~~lh~-~~i~H~dl~p~ni~i~~~~~~~l~df 145 (277)
T cd06917 75 ----PRLWIIMEYAEGGSVRTLMKAGP----IAEKYISVIIREVLVALKYIHK-VGVIHRDIKAANILVTNTGNVKLCDF 145 (277)
T ss_pred ----CEEEEEEecCCCCcHHHHHHccC----CCHHHHHHHHHHHHHHHHHHHh-CCcccCCcCHHHEEEcCCCCEEEccC
Confidence 4899999999 47988886542 2344466679999999999995 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc-----
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN----- 248 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~----- 248 (778)
|++......... .....+...|+|||.+.++ ..++.++|+|||||++|+|++|..||.......
T Consensus 146 g~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~ 214 (277)
T cd06917 146 GVAALLNQNSSK------RSTFVGTPYWMAPEVITEG-----KYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLI 214 (277)
T ss_pred CceeecCCCccc------cccccCCcceeCHHHhccC-----CccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhcc
Confidence 998877543210 1112344579999998653 345678999999999999999999885432110
Q ss_pred ----c-----CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ----T-----ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ----~-----~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ..++..+.+++.+||+.+|.+||++.+++.++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~ 256 (277)
T cd06917 215 PKSKPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSK 256 (277)
T ss_pred ccCCCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhCh
Confidence 0 12566788999999999999999999999997
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=266.98 Aligned_cols=238 Identities=18% Similarity=0.215 Sum_probs=188.5
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.+|.|+ | .||+|..+.+|+.|+||.+...... ....+.+.+|++++++++||||+++++.+..+
T Consensus 3 ~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~------ 74 (267)
T cd08224 3 NFKIEKKIGKGQFS--VVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIEN------ 74 (267)
T ss_pred ceeeeeeeccCCce--EEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecC------
Confidence 699999999998 8 8999999999999999998753322 23456788999999999999999999999864
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcC-CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLE-GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~-~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
...|+||||+ ++|..++...... .......+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||
T Consensus 75 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~-~~i~h~dl~p~nil~~~~~~~~l~d~~ 151 (267)
T cd08224 75 --NELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHS-KRIMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred --CeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHh-CCEecCCcChhhEEECCCCcEEEeccc
Confidence 3789999999 4899888764321 112344466669999999999995 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh------hc
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------RN 248 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l------~~ 248 (778)
++..+...... .....+...|+|||.+.+ ..++.++|+|||||++|+|++|..|+..... ..
T Consensus 152 ~~~~~~~~~~~------~~~~~~~~~y~apE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 219 (267)
T cd08224 152 LGRFFSSKTTA------AHSLVGTPYYMSPERIHE------NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKK 219 (267)
T ss_pred eeeeccCCCcc------cceecCCccccCHHHhcc------CCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhh
Confidence 98765432110 111234457999999875 3567789999999999999999988743211 00
Q ss_pred -----c-----CCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 249 -----T-----ASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 249 -----~-----~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. ..++..+.+++.+||..+|..||++.++++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~ 261 (267)
T cd08224 220 IEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQV 261 (267)
T ss_pred hhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 1 1345578889999999999999999988764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-30 Score=283.06 Aligned_cols=243 Identities=18% Similarity=0.260 Sum_probs=191.7
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|.+.+.+|.|+ | +||.|+++.++..|+||.+............+.+|+.+|+.++||||+++++++......
T Consensus 5 ~~y~~~~~lg~G~~~--~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~--- 79 (337)
T cd07858 5 TKYVPIKPIGRGAYG--IVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHRE--- 79 (337)
T ss_pred cceeEEEEeccCCCe--EEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheeccccc---
Confidence 4699999999998 8 899999999999999999876433333345677899999999999999999988753211
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
....+|||+||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 80 ~~~~~~lv~e~~~~~L~~~~~~~~~---l~~~~~~~i~~qi~~aL~~LH~-~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~ 155 (337)
T cd07858 80 AFNDVYIVYELMDTDLHQIIRSSQT---LSDDHCQYFLYQLLRGLKYIHS-ANVLHRDLKPSNLLLNANCDLKICDFGLA 155 (337)
T ss_pred ccCcEEEEEeCCCCCHHHHHhcCCC---CCHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEEcCCCCEEECcCccc
Confidence 023689999999 578888765432 3345567779999999999995 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----------
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---------- 246 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l---------- 246 (778)
......... .....++..|+|||.+.+. ..++.++|+|||||++|+|++|.++|.....
T Consensus 156 ~~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 224 (337)
T cd07858 156 RTTSEKGDF------MTEYVVTRWYRAPELLLNC-----SEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITEL 224 (337)
T ss_pred cccCCCccc------ccccccccCccChHHHhcC-----CCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHH
Confidence 876442110 1112345589999987643 2466789999999999999999988743210
Q ss_pred ---------------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 ---------------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ---------------------------------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....++..+.+++++||+.+|.+||++.++++|+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~ 292 (337)
T cd07858 225 LGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHP 292 (337)
T ss_pred hCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCc
Confidence 00124567788999999999999999999999998
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=275.30 Aligned_cols=234 Identities=17% Similarity=0.220 Sum_probs=188.2
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
-|++.+.||.|. | .||+|.+..++..|+||.+...... ...+.+.+|++++++++||||+++++.+..+
T Consensus 5 ~y~~~~~l~~g~~~--~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 74 (277)
T cd06642 5 LFTKLERIGKGSFG--EVYKGIDNRTKEVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYITRYYGSYLKG------- 74 (277)
T ss_pred HHHHHHHhcCCCCe--eEEEEEEcCCCeEEEEEEeccccch-HHHHHHHHHHHHHHcCCCCccHhhhcccccC-------
Confidence 477888899987 7 8999999999999999998755333 3456789999999999999999999999864
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|+||||+ ++|.+++.... .....+...+.||+.||.|||+ .+++|+||+|+||+++.+|.+||+|||++
T Consensus 75 -~~~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~i~~~l~~lH~-~~ivH~dl~p~ni~i~~~~~~~l~dfg~~ 148 (277)
T cd06642 75 -TKLWIIMEYLGGGSALDLLKPGP----LEETYIATILREILKGLDYLHS-ERKIHRDIKAANVLLSEQGDVKLADFGVA 148 (277)
T ss_pred -CceEEEEEccCCCcHHHHhhcCC----CCHHHHHHHHHHHHHHHHHHhc-CCeeccCCChheEEEeCCCCEEEcccccc
Confidence 4899999999 46888876532 2344566779999999999995 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh----c----
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----N---- 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~----~---- 248 (778)
..+..... ......+...|++||++.+ ..++.++|+|||||++|||++|..|+...... .
T Consensus 149 ~~~~~~~~------~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~ 216 (277)
T cd06642 149 GQLTDTQI------KRNTFVGTPFWMAPEVIKQ------SAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKN 216 (277)
T ss_pred ccccCcch------hhhcccCcccccCHHHhCc------CCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcC
Confidence 77654211 0111123457999999876 35677899999999999999999887532110 0
Q ss_pred -----cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -----~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++.+||..+|.+||++.++++|+
T Consensus 217 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 254 (277)
T cd06642 217 SPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHK 254 (277)
T ss_pred CCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhH
Confidence 123566788999999999999999999999998
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-30 Score=286.22 Aligned_cols=241 Identities=16% Similarity=0.192 Sum_probs=183.6
Q ss_pred CCCceeccCCCCCC-CceEEEEeEE-----CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEe
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTS-----KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEV 90 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~-----k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~ 90 (778)
..+|++++.||.|+ | +||+|++ ..++..|+||++...... ...+.+.+|+++|+.+ +||||+++++.+..
T Consensus 34 ~~~~~~~~~LG~G~fG--~V~~~~~~~~~~~~~~~~vavK~l~~~~~~-~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~ 110 (375)
T cd05104 34 RNRLSFGKTLGAGAFG--KVVEATAYGLFKSDAAMTVAVKMLKPSAHL-TEREALMSELKVLSYLGNHINIVNLLGACTV 110 (375)
T ss_pred hHHeehhheecCCccc--eEEEEEEeccccCccceeEEEEeccCCcCc-HHHHHHHHHHHHHHHhcCCcceeeeeeeecc
Confidence 34799999999998 8 8999974 345678999998754322 3456788999999999 89999999999976
Q ss_pred cccccCCcccEEEEEecCC--cChHHHHHHhCcC----------------------------------------------
Q 004025 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLE---------------------------------------------- 122 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~---------------------------------------------- 122 (778)
. ...|+||||| ++|.+++......
T Consensus 111 ~--------~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 182 (375)
T cd05104 111 G--------GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTK 182 (375)
T ss_pred C--------CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccc
Confidence 4 3789999999 6899888653210
Q ss_pred --------------------------CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 123 --------------------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 123 --------------------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
.......+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~-~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 261 (375)
T cd05104 183 ADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS-KNCIHRDLAARNILLTHGRITKICDFGLA 261 (375)
T ss_pred cccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccCCchhhEEEECCCcEEEecCccc
Confidence 001122345568999999999995 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhh--------hh
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE--------LR 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~--------l~ 247 (778)
.......... .......+..|+|||++.+ ..++.++|+|||||++|||++ |..||.... +.
T Consensus 262 ~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~ 331 (375)
T cd05104 262 RDIRNDSNYV----VKGNARLPVKWMAPESIFN------CVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIK 331 (375)
T ss_pred eeccCccccc----ccCCCCCCcceeChhHhcC------CCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHH
Confidence 8765422100 0001122346999999876 356789999999999999998 677764321 11
Q ss_pred c------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 N------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 ~------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. ....|..+.+++.+||+.||.+||++.++++.
T Consensus 332 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 332 EGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred hCccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 0 12356678999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.5e-30 Score=272.95 Aligned_cols=236 Identities=15% Similarity=0.184 Sum_probs=187.8
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
|++.+.||.|+ | +||.|+++.+++.|+||.+....... .....+.+|+++|+.++||||+.+++.+..+
T Consensus 2 ~~~~~~lg~G~~g--~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~------- 72 (285)
T cd05632 2 FRQYRVLGKGGFG--EVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETK------- 72 (285)
T ss_pred ceEEEEEecCCCe--EEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecC-------
Confidence 77888899998 8 99999999999999999997653322 2345577899999999999999999999864
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|+||||+ ++|..++...+.. ......+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||++
T Consensus 73 -~~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~ql~~~l~~lH~-~~iiH~dikp~Nili~~~~~~kl~Dfg~~ 149 (285)
T cd05632 73 -DALCLVLTIMNGGDLKFHIYNMGNP-GFEEERALFYAAEILCGLEDLHR-ENTVYRDLKPENILLDDYGHIRISDLGLA 149 (285)
T ss_pred -CEEEEEEEeccCccHHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHh-CCeeecCCCHHHEEECCCCCEEEecCCcc
Confidence 3899999999 4688777654321 12344566679999999999995 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-------h-h-
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-------L-R- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-------l-~- 247 (778)
........ .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||.... . .
T Consensus 150 ~~~~~~~~-------~~~~~g~~~~~aPE~~~~------~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~ 216 (285)
T cd05632 150 VKIPEGES-------IRGRVGTVGYMAPEVLNN------QRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRR 216 (285)
T ss_pred eecCCCCc-------ccCCCCCcCccChHHhcC------CCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 76533110 112245568999999876 356778999999999999999999885321 1 0
Q ss_pred -------ccCCCCcchHHHHHHHhccCCCCCCC-----hHHHHhcc
Q 004025 248 -------NTASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENS 281 (778)
Q Consensus 248 -------~~~~iP~~L~~~i~~lL~~dP~~Rps-----~~~lL~~~ 281 (778)
....++..+.+++.+||+.+|.+|++ +.++++|+
T Consensus 217 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~ 262 (285)
T cd05632 217 VLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHP 262 (285)
T ss_pred hhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcCh
Confidence 01346667888999999999999999 78999987
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.8e-30 Score=272.33 Aligned_cols=241 Identities=17% Similarity=0.153 Sum_probs=185.6
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.||.|+ | .||.++++.+++.|+||.+...... .....+.+|+..+.++. ||||+++++.+..+
T Consensus 5 ~~~~~~~lg~G~~g--~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~------ 75 (288)
T cd06616 5 DLKDLGEIGRGAFG--TVNKMLHKPSGTIMAVKRIRSTVDE-KEQKRLLMDLDVVMRSSDCPYIVKFYGALFRE------ 75 (288)
T ss_pred HhHHHHHhCCCCce--EEEEEEECCCCCEEEEEEehhccCh-HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecC------
Confidence 577788899987 7 9999999999999999999865333 33456788999999996 99999999998764
Q ss_pred cccEEEEEecCC-cChHHHHHHh--CcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKEL--GLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~--~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
...|++|||+ .+|..+.... ..........+..++.|++.||.|||+..+++||||||+||+++.+|.+||+|||
T Consensus 76 --~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg 153 (288)
T cd06616 76 --GDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFG 153 (288)
T ss_pred --CcEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecc
Confidence 3789999999 4555433221 1112233445667799999999999965699999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh-----hhhcc
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-----ELRNT 249 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~-----~l~~~ 249 (778)
++..+..... .....+...|++||++.+.- ...++.++|+|||||++|+|++|..||... .+...
T Consensus 154 ~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~---~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~ 223 (288)
T cd06616 154 ISGQLVDSIA-------KTRDAGCRPYMAPERIDPSA---RDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQV 223 (288)
T ss_pred hhHHhccCCc-------cccccCccCccCHHHhcccc---ccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhh
Confidence 9876643211 11113345799999986521 125677999999999999999999987532 11110
Q ss_pred -------------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 250 -------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 250 -------------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
..++..+.+++.+||+.+|.+||++.++++|+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~ 268 (288)
T cd06616 224 VKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHP 268 (288)
T ss_pred cCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 12556688999999999999999999999998
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-30 Score=279.62 Aligned_cols=244 Identities=16% Similarity=0.131 Sum_probs=183.3
Q ss_pred ccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEE
Q 004025 24 GDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 24 ~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~l 102 (778)
.+.||.|. +.-+||.++++.+|+.|+||++..........+.+++|+.+++.++||||+++++++... ..+
T Consensus 3 ~~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~--------~~~ 74 (328)
T cd08226 3 QVEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTG--------SWL 74 (328)
T ss_pred HHHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecC--------Cce
Confidence 34566664 222899999999999999999987654555667899999999999999999999999874 389
Q ss_pred EEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccC
Q 004025 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (778)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~ 180 (778)
|+|+||+ ++|.+++...... ......+..++.||+.||.|||+ ++++||||||+||+++.++.+|++||+.+....
T Consensus 75 ~~v~e~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~qi~~aL~~lH~-~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~ 152 (328)
T cd08226 75 WVISPFMAYGSANSLLKTYFPE-GMSEALIGNILFGALRGLNYLHQ-NGYIHRNIKASHILISGDGLVSLSGLSHLYSLV 152 (328)
T ss_pred EEEEecccCCCHHHHHHhhccc-CCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEeCCCcEEEechHHHhhhh
Confidence 9999999 4788888765322 23344566779999999999995 999999999999999999999999998765443
Q ss_pred CCCCCCCCCccccc-cccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----h-hc------
Q 004025 181 GNNEAANGPMLQYA-WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----L-RN------ 248 (778)
Q Consensus 181 ~~~~~~~~~~~~~~-~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l-~~------ 248 (778)
.........+.... ......|++||++.++. ..++.++|+|||||++|||++|..||.... + ..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~----~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~ 228 (328)
T cd08226 153 RNGQKAKVVYDFPQFSTSVLPWLSPELLRQDL----YGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPY 228 (328)
T ss_pred ccCccccccccccccccCccCccChhhhcCCC----CCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCC
Confidence 22111100000000 11234699999987632 235678999999999999999998875321 0 00
Q ss_pred ------------------------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 249 ------------------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 249 ------------------------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
...++..+.+++++||..||.+||++.++++|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 229 SPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred CCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 00123457788999999999999999999999
Q ss_pred c
Q 004025 281 S 281 (778)
Q Consensus 281 ~ 281 (778)
+
T Consensus 309 ~ 309 (328)
T cd08226 309 A 309 (328)
T ss_pred H
Confidence 8
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.4e-30 Score=270.92 Aligned_cols=241 Identities=16% Similarity=0.177 Sum_probs=187.1
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECC-----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEec
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKD-----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~-----~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e 91 (778)
...|.+.+.+|.|+ | .||+|+.+. ++..|+||.+..... ....+.+.+|+++|+.++||||+++++.++..
T Consensus 4 ~~~~~~~~~lg~g~~~--~v~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 80 (280)
T cd05049 4 RDTIVLKRELGEGAFG--KVFLGECYHLEPENDKELVAVKTLKETAS-NDARKDFEREAELLTNFQHENIVKFYGVCTEG 80 (280)
T ss_pred hHHhhHHhhccccCCc--eEeeeeeccccCcCCcceEEEEeecccCC-HHHHHHHHHHHHHHHhcCCCCchheeeEEecC
Confidence 34699999999998 8 899998753 468899999875433 23456789999999999999999999999874
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcC-----------CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCC
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLE-----------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLS 158 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~-----------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~ 158 (778)
...|+||||+ ++|.+++...+.. .......+..++.||+.||.|||+ .+++||||||+
T Consensus 81 --------~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~-~~i~h~dlkp~ 151 (280)
T cd05049 81 --------DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS-QHFVHRDLATR 151 (280)
T ss_pred --------CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhh-CCeeccccccc
Confidence 3899999999 5799999865421 112233456679999999999995 89999999999
Q ss_pred CeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-C
Q 004025 159 SVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-G 237 (778)
Q Consensus 159 NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g 237 (778)
||+++.++.+||+|||++........... ......+..|+|||++.+ ..++.++|+|||||++|||++ |
T Consensus 152 nili~~~~~~kl~d~g~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~e~~~~g 221 (280)
T cd05049 152 NCLVGYDLVVKIGDFGMSRDVYTTDYYRV----GGHTMLPIRWMPPESIMY------RKFTTESDVWSFGVVLWEIFTYG 221 (280)
T ss_pred eEEEcCCCeEEECCcccceecccCcceec----CCCCcccceecChhhhcc------CCcchhhhHHHHHHHHHHHHhcC
Confidence 99999999999999999876533211000 011123457999999876 356778999999999999998 8
Q ss_pred CCCCChhhh----h---------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 238 MRLSKTEEL----R---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 238 ~~p~~~~~l----~---------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
..||..... . ....+|..+.+++.+||..||..||++.++++.
T Consensus 222 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 277 (280)
T cd05049 222 KQPWYGLSNEEVIECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHER 277 (280)
T ss_pred CCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 877642111 0 013466788999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-29 Score=267.59 Aligned_cols=246 Identities=12% Similarity=0.116 Sum_probs=186.9
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCC---CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDG---SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g---~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
|.+++.+|.|+ | .||.|+.+.++ ..|+||.+............+.+|+..++.++||||+++++.+......
T Consensus 1 ~~~~~~lg~G~~g--~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~-- 76 (273)
T cd05035 1 LKLGKILGEGEFG--SVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSL-- 76 (273)
T ss_pred CccccccCcCCCc--eEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCcc--
Confidence 67899999998 8 89999987544 7899999986544445567789999999999999999999987653310
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcC---CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLE---GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~---~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
......|+++||+ ++|..++...... .......+..++.||+.||.|||+ .+++||||||+||++++++.+||+
T Consensus 77 ~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~-~~i~H~dlkp~Nil~~~~~~~kl~ 155 (273)
T cd05035 77 QKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSN-RNFIHRDLAARNCMLREDMTVCVA 155 (273)
T ss_pred ccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHh-CCeeccccchheEEECCCCeEEEC
Confidence 0023589999999 5788888654321 122334466679999999999995 899999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh----
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL---- 246 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l---- 246 (778)
|||+++.......... ......+..|++||.+.+ ..++.++|+|||||++|||++ |..||.....
T Consensus 156 dfg~~~~~~~~~~~~~----~~~~~~~~~~~~pe~~~~------~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~ 225 (273)
T cd05035 156 DFGLSKKIYSGDYYRQ----GRIAKMPVKWIAIESLAD------RVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIY 225 (273)
T ss_pred Cccceeeccccccccc----cccccCCccccCHhhccc------CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 9999887654221100 111122347999998765 356789999999999999999 7777643211
Q ss_pred ---------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 ---------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ---------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....++..+.+++.+||+.||.+||++.+++++-
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l 269 (273)
T cd05035 226 DYLRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVL 269 (273)
T ss_pred HHHHcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 11234667789999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-30 Score=282.34 Aligned_cols=239 Identities=16% Similarity=0.259 Sum_probs=186.4
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|.+.+.||.|+ | .||+|+++.+|+.|+||++.+....+.....+.+|+.+++.++||||++++++++..... .
T Consensus 15 ~~y~~~~~ig~g~~g--~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~--~ 90 (342)
T cd07879 15 ERYTSLKQVGSGAYG--SVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSG--D 90 (342)
T ss_pred cceEEEEEeeecCCe--EEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccC--C
Confidence 5799999999987 7 899999999999999999986544444455678999999999999999999998753210 0
Q ss_pred cccEEEEEecCCc-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
....+|+|+||+. .|..++.. ......+.+++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++
T Consensus 91 ~~~~~~lv~e~~~~~l~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~-~~i~H~dlkp~NIll~~~~~~kL~dfg~~ 164 (342)
T cd07879 91 EFQDFYLVMPYMQTDLQKIMGH-----PLSEDKVQYLVYQMLCGLKYIHS-AGIIHRDLKPGNLAVNEDCELKILDFGLA 164 (342)
T ss_pred CCceEEEEecccccCHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCCCEEEeeCCCC
Confidence 1236799999995 45544321 12345577789999999999995 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----h-----
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R----- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~----- 247 (778)
....... ....++..|+|||++.+. ..++.++|+|||||++|||++|+.+|..... .
T Consensus 165 ~~~~~~~---------~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~ 230 (342)
T cd07879 165 RHADAEM---------TGYVVTRWYRAPEVILNW-----MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKV 230 (342)
T ss_pred cCCCCCC---------CCceeeecccChhhhcCc-----cccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 7653211 112334579999997652 2456789999999999999999988854210 0
Q ss_pred ----------------------c------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ----------------------N------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ----------------------~------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ...++..+.+++.+||+.||.+||++.+++.|+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~ 298 (342)
T cd07879 231 TGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHP 298 (342)
T ss_pred cCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCc
Confidence 0 013445678899999999999999999999998
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=265.18 Aligned_cols=236 Identities=20% Similarity=0.280 Sum_probs=188.7
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc---hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ---DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~---~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
+|++++.+|.|+ | +||+|..+.+++.|+||.+...... ....+.+.+|+..++.++||||+++++.++.+
T Consensus 1 ~~~~~~~ig~g~~~--~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~---- 74 (258)
T cd06632 1 RWRKGELLGSGSFG--SVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREE---- 74 (258)
T ss_pred CccccceeeecCCc--eEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecC----
Confidence 488889999998 7 9999999999999999998764322 23566789999999999999999999998763
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..+|+++||+ ++|.+++..... .....+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+||
T Consensus 75 ----~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~~~ni~~~~~~~~kl~d~ 146 (258)
T cd06632 75 ----DNLYIFLELVPGGSLAKLLKKYGS---FPEPVIRLYTRQILLGLEYLHD-RNTVHRDIKGANILVDTNGVVKLADF 146 (258)
T ss_pred ----CeEEEEEEecCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCCCEEEccC
Confidence 4899999999 479998876542 2234456669999999999995 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----h---
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----L--- 246 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l--- 246 (778)
|++........ .....+...|++||.+... ..++.++|+|||||++|+|++|..||.... .
T Consensus 147 ~~~~~~~~~~~-------~~~~~~~~~y~~pe~~~~~-----~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~ 214 (258)
T cd06632 147 GMAKQVVEFSF-------AKSFKGSPYWMAPEVIAQQ-----GGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKI 214 (258)
T ss_pred ccceecccccc-------ccccCCCcceeCHHHhcCC-----CCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHH
Confidence 99877644220 1112334579999997652 126788999999999999999998875321 0
Q ss_pred ---hcc----CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 ---RNT----ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ---~~~----~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
... ..++..+.+++.+||..+|.+||++.+++.|+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~ 256 (258)
T cd06632 215 GRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHP 256 (258)
T ss_pred HhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCC
Confidence 011 23455678889999999999999999999997
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-29 Score=270.20 Aligned_cols=241 Identities=17% Similarity=0.230 Sum_probs=185.1
Q ss_pred CCceeccCCCCCC-CceEEEEeEE----CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTS----KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~----k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
..|++.+.||.|+ | +||+|+. ..++..|+||.+..... ......+.+|+.+++.++||||+++++.+...
T Consensus 5 ~~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-- 79 (283)
T cd05090 5 SAVRFMEELGECAFG--KIYKGHLYLPGMDHAQLVAIKTLKDINN-PQQWGEFQQEASLMAELHHPNIVCLLGVVTQE-- 79 (283)
T ss_pred hhceeeeeccccCCc--ceEEEEEecCCCCCcceEEEEeccCCCC-HHHHHHHHHHHHHHhhCCCCCeeeEEEEEecC--
Confidence 4689999999998 8 8999985 34568899999875433 33456788999999999999999999998763
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcC--------------CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCC
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLE--------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCL 157 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~--------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp 157 (778)
...|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++||||||
T Consensus 80 ------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~-~~i~H~dlkp 152 (283)
T cd05090 80 ------QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSS-HFFVHKDLAA 152 (283)
T ss_pred ------CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHh-cCeehhcccc
Confidence 3789999999 4799888643210 111233355668999999999995 8999999999
Q ss_pred CCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-
Q 004025 158 SSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS- 236 (778)
Q Consensus 158 ~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t- 236 (778)
+||+++.++.+||+|||+++......... .......+..|+|||.+.+. .++.++|+|||||++|||++
T Consensus 153 ~nili~~~~~~kl~dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~il~el~~~ 222 (283)
T cd05090 153 RNILIGEQLHVKISDLGLSREIYSADYYR----VQPKSLLPIRWMPPEAIMYG------KFSSDSDIWSFGVVLWEIFSF 222 (283)
T ss_pred ceEEEcCCCcEEeccccccccccCCccee----cccCCCccceecChHHhccC------CCCchhhhHHHHHHHHHHHcC
Confidence 99999999999999999998764422110 01111223479999998753 46779999999999999998
Q ss_pred CCCCCChhh---h----h------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 237 GMRLSKTEE---L----R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 237 g~~p~~~~~---l----~------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
|..||.... + . ....+|..+.+++.+|++.+|.+||++.+++++.
T Consensus 223 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l 280 (283)
T cd05090 223 GLQPYYGFSNQEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRL 280 (283)
T ss_pred CCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHh
Confidence 777764311 1 0 1134677788999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-29 Score=262.65 Aligned_cols=236 Identities=20% Similarity=0.331 Sum_probs=193.1
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.+|.|. | .||.|+++.+++.|+||.+......+...+.+.+|++.+++++||||+++++++...
T Consensus 1 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 71 (254)
T cd06627 1 NYQLGDLIGRGAFG--VVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETS------- 71 (254)
T ss_pred CceeeeEEcccCCe--EEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeC-------
Confidence 589999999987 7 999999999999999999987655445667899999999999999999999998763
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|++|||+ ++|.+++..... .....+.+++.|++.||.|||+ .+++||||+|+||+++.+|.+||+|||++
T Consensus 72 -~~~~~v~e~~~~~~L~~~~~~~~~---l~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~ni~i~~~~~~~l~d~~~~ 146 (254)
T cd06627 72 -DSLYIILEYAENGSLRQIIKKFGP---FPESLVAVYVYQVLQGLAYLHE-QGVIHRDIKAANILTTKDGVVKLADFGVA 146 (254)
T ss_pred -CEEEEEEecCCCCcHHHHHHhccC---CCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCHHHEEECCCCCEEEeccccc
Confidence 3899999999 479888876532 2345567779999999999995 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh---------h
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---------R 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l---------~ 247 (778)
......... .........|++||...+. .++.++|+|+||+++|+|++|..++..... .
T Consensus 147 ~~~~~~~~~------~~~~~~~~~y~~pe~~~~~------~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~ 214 (254)
T cd06627 147 TKLNDVSKD------DASVVGTPYWMAPEVIEMS------GASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQD 214 (254)
T ss_pred eecCCCccc------ccccccchhhcCHhhhcCC------CCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcc
Confidence 877653211 1112234479999998653 467789999999999999999988743210 0
Q ss_pred c----cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 N----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ~----~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ...++..+.+++.+||..+|++||++.+++.++
T Consensus 215 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~ 252 (254)
T cd06627 215 DHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHP 252 (254)
T ss_pred CCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCC
Confidence 1 134567788999999999999999999999987
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=99.97 E-value=9e-30 Score=268.35 Aligned_cols=238 Identities=18% Similarity=0.227 Sum_probs=187.5
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.||.|. | .||+|+.+.++..|+||.+...... ......+.+|+++++.++||||+++++.+..+
T Consensus 3 ~y~~~~~ig~g~~g--~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~------ 74 (267)
T cd08229 3 NFRIEKKIGRGQFS--EVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIED------ 74 (267)
T ss_pred hhhhhhhhcccCCe--EEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeC------
Confidence 589999999998 8 8999999999999999988754322 23456788999999999999999999999864
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcC-CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLE-GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~-~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+|++|||+ ++|.+++...... .......+..++.||+.||.|||+ .+++|+||+|+||+++.+|.+||+|||
T Consensus 75 --~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dl~p~nili~~~~~~~l~dfg 151 (267)
T cd08229 75 --NELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHS-RRVMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred --CeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEEcCCCCEEECcch
Confidence 3899999999 4798888754322 122334456669999999999995 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh------hc
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------RN 248 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l------~~ 248 (778)
++......... .....+...|+|||.+.+ ..++.++|+|||||++|+|++|..||..... ..
T Consensus 152 ~~~~~~~~~~~------~~~~~~~~~~~ape~~~~------~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 219 (267)
T cd08229 152 LGRFFSSKTTA------AHSLVGTPYYMSPERIHE------NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKK 219 (267)
T ss_pred hhhccccCCcc------cccccCCcCccCHHHhcC------CCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhh
Confidence 98766432110 111234458999999865 3566789999999999999999988743211 00
Q ss_pred ----------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 249 ----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 249 ----------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
...++..+..++.+||..+|.+||++.++++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~ 261 (267)
T cd08229 220 IEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDV 261 (267)
T ss_pred hhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHH
Confidence 01345678899999999999999999988764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=286.43 Aligned_cols=238 Identities=16% Similarity=0.181 Sum_probs=189.3
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
....++++||+|. | +||+|++- -.||||+++.....+..++.+++||..||+-||-||+-|++++-..
T Consensus 392 ~ev~l~~rIGsGsFG--tV~Rg~wh---GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p------ 460 (678)
T KOG0193|consen 392 EEVLLGERIGSGSFG--TVYRGRWH---GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP------ 460 (678)
T ss_pred HHhhccceecccccc--ceeecccc---cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC------
Confidence 3456788999998 8 99999985 4699999998877778999999999999999999999999999763
Q ss_pred cccEEEEEecCCc--ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
.+.|||.+|+ +|+.+|...... .....+.-++.||++|+.|||. ++|||+|||..|||+.+++.+||+|||+
T Consensus 461 ---~~AIiTqwCeGsSLY~hlHv~etk--fdm~~~idIAqQiaqGM~YLHA-K~IIHrDLKSnNIFl~~~~kVkIgDFGL 534 (678)
T KOG0193|consen 461 ---PLAIITQWCEGSSLYTHLHVQETK--FDMNTTIDIAQQIAQGMDYLHA-KNIIHRDLKSNNIFLHEDLKVKIGDFGL 534 (678)
T ss_pred ---ceeeeehhccCchhhhhccchhhh--hhHHHHHHHHHHHHHhhhhhhh-hhhhhhhccccceEEccCCcEEEecccc
Confidence 3599999994 599988754311 1112245569999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh---------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------- 246 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l--------- 246 (778)
++....... ...+.. ..+-..|||||+++-+- ...++..+|+|+|||++|||++|..||..+..
T Consensus 535 atvk~~w~g--~~q~~q--p~gsilwmAPEvIRmqd---~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGr 607 (678)
T KOG0193|consen 535 ATVKTRWSG--EQQLEQ--PHGSLLWMAPEVIRMQD---DNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGR 607 (678)
T ss_pred eeeeeeecc--ccccCC--CccchhhhcHHHHhhcc---cCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecc
Confidence 976543211 001100 01223899999998421 24678899999999999999999988863221
Q ss_pred --------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 247 --------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 247 --------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+.|+.+.+++..||..+++.||.+.++|..
T Consensus 608 G~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~ 649 (678)
T KOG0193|consen 608 GYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSK 649 (678)
T ss_pred cccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHH
Confidence 1224678899999999999999999999988863
|
|
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.2e-30 Score=276.35 Aligned_cols=240 Identities=16% Similarity=0.186 Sum_probs=185.6
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCc----EEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEe
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSP----VSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~----VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~ 90 (778)
+...+|++.+.||+|+ | +||+|+++.+++. |+||++.... .....+.+.+|+.+++.++||||+++++.+..
T Consensus 4 ~~~~~f~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~ 80 (316)
T cd05108 4 LKETEFKKIKVLGSGAFG--TVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLT 80 (316)
T ss_pred cchhhceeeeeeecCCCc--eEEEEEEecCCCccceeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC
Confidence 3556799999999998 8 9999998777664 8999986432 23345678899999999999999999998875
Q ss_pred cccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcE
Q 004025 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDW 168 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~ 168 (778)
+ ..++++||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.++.+
T Consensus 81 ~---------~~~~v~e~~~~g~l~~~l~~~~~~--~~~~~~~~~~~qi~~~L~~LH~-~~iiH~dlkp~Nill~~~~~~ 148 (316)
T cd05108 81 S---------TVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNYLEE-RRLVHRDLAARNVLVKTPQHV 148 (316)
T ss_pred C---------CceeeeecCCCCCHHHHHHhcccc--CCHHHHHHHHHHHHHHHHHHHh-cCeeccccchhheEecCCCcE
Confidence 3 468999998 6799988764321 1233344558899999999995 899999999999999999999
Q ss_pred EEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh-
Q 004025 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL- 246 (778)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l- 246 (778)
||+|||++..+..... .........+..|++||++.+ ..++.++|+|||||++|||++ |..|+.....
T Consensus 149 kl~DfG~a~~~~~~~~----~~~~~~~~~~~~y~apE~~~~------~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~ 218 (316)
T cd05108 149 KITDFGLAKLLGADEK----EYHAEGGKVPIKWMALESILH------RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 218 (316)
T ss_pred EEccccccccccCCCc----ceeccCCccceeecChHHhcc------CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 9999999987654221 111111122347999999876 356789999999999999997 8888754221
Q ss_pred --hc----------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 247 --RN----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 247 --~~----------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
.. ...++..+..++.+||..+|..||++.+++.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 219 EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 11 12345568888999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-29 Score=277.08 Aligned_cols=236 Identities=18% Similarity=0.261 Sum_probs=189.0
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
..+|++.+.||.|+ | .||+|+++.+|..|+||++.+........+.+.+|+.+++.++||||+++++++....
T Consensus 9 ~~~y~~~~~ig~g~~g--~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~---- 82 (328)
T cd07856 9 TNRYVDLQPVGMGAFG--LVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPL---- 82 (328)
T ss_pred ccceEEEEeecccCCe--EEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCC----
Confidence 45799999999988 8 8999999999999999998764433344567889999999999999999999987532
Q ss_pred CcccEEEEEecCCc-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 97 STKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 97 ~~~~~lyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
...|+|+||++ .|..+++.... ....+.+++.||++||.|||+ .+++||||+|+||+++.+|.+||+|||+
T Consensus 83 ---~~~~lv~e~~~~~L~~~~~~~~~----~~~~~~~~~~ql~~aL~~LH~-~~iiH~dl~p~Nili~~~~~~~l~dfg~ 154 (328)
T cd07856 83 ---EDIYFVTELLGTDLHRLLTSRPL----EKQFIQYFLYQILRGLKYVHS-AGVVHRDLKPSNILINENCDLKICDFGL 154 (328)
T ss_pred ---CcEEEEeehhccCHHHHHhcCCC----CHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEeECCCCCEEeCcccc
Confidence 37899999994 67777764332 234466779999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh---------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------- 246 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l--------- 246 (778)
+....... ....+...|++||.+.+. ..++.++|+|||||++|+|++|.++|.....
T Consensus 155 ~~~~~~~~---------~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~ 220 (328)
T cd07856 155 ARIQDPQM---------TGYVSTRYYRAPEIMLTW-----QKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITD 220 (328)
T ss_pred ccccCCCc---------CCCcccccccCceeeecc-----CCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 87553311 112334579999987652 3467899999999999999999988743210
Q ss_pred ----------------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 ----------------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ----------------------------------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....++..+.+++++||..+|.+||++.+++.|+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~ 289 (328)
T cd07856 221 LLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHP 289 (328)
T ss_pred HhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCC
Confidence 00123566788999999999999999999999998
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-29 Score=260.92 Aligned_cols=234 Identities=17% Similarity=0.270 Sum_probs=190.5
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
.|++.+.++.|. | .||+++++.+++.|++|++..... .....+.+|+..++.++||||+++++.+..+
T Consensus 1 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 69 (253)
T cd05122 1 LFEILEKIGKGGFG--EVYKARHKRTGKEVAIKVIKLESK--EKKEKIINEIQILKKCKHPNIVKYYGSYLKK------- 69 (253)
T ss_pred CceeeeeeccCCce--EEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-------
Confidence 488999999987 7 899999999999999999986533 3456788999999999999999999999874
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
...|+++||+ ++|.+++.... .......+.+++.|++.||.|||+ .+++||||+|+||+++.+|.+||+|||++
T Consensus 70 -~~~~l~~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~-~~i~h~dl~p~ni~i~~~~~~~l~d~~~~ 145 (253)
T cd05122 70 -DELWIVMEFCSGGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHS-NGIIHRDIKAANILLTSDGEVKLIDFGLS 145 (253)
T ss_pred -CeEEEEEecCCCCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhc-CCEecCCCCHHHEEEccCCeEEEeecccc
Confidence 3789999999 46888887653 122345577789999999999995 99999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-h--------
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-R-------- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l-~-------- 247 (778)
........ .........|+|||.+.+. .++.++|+|||||++|+|++|..|+..... .
T Consensus 146 ~~~~~~~~-------~~~~~~~~~~~~PE~~~~~------~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 212 (253)
T cd05122 146 AQLSDTKA-------RNTMVGTPYWMAPEVINGK------PYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATN 212 (253)
T ss_pred cccccccc-------ccceecCCcccCHHHHcCC------CCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhc
Confidence 87754321 1112234589999998763 467789999999999999999988754310 0
Q ss_pred ------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++++||..+|.+||++.++++|+
T Consensus 213 ~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~ 252 (253)
T cd05122 213 GPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHP 252 (253)
T ss_pred CCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhcCC
Confidence 0112367789999999999999999999999997
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-29 Score=270.00 Aligned_cols=240 Identities=21% Similarity=0.329 Sum_probs=189.5
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~ 99 (778)
|++.+++|.|+ | .||+|+.+.+|+.|+||.+......+.....+.+|+.+++.++||||+++++.+.... .
T Consensus 1 y~~~~~l~~g~~~--~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~------~ 72 (287)
T cd07840 1 YEKIAQIGEGTYG--QVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKG------K 72 (287)
T ss_pred CeeeEEeccCCCe--EEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCC------C
Confidence 78889999987 7 9999999999999999999876534444566889999999999999999999998642 1
Q ss_pred cEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccc
Q 004025 100 ITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (778)
Q Consensus 100 ~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~ 178 (778)
..+|+|+||+ ++|..++..... ......+..++.||+.||.|||+ .+++|+||+|+||+++++|.+||+|||++..
T Consensus 73 ~~~~lv~e~~~~~l~~~~~~~~~--~~~~~~~~~i~~~i~~al~~LH~-~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~ 149 (287)
T cd07840 73 GSIYMVFEYMDHDLTGLLDSPEV--KFTESQIKCYMKQLLEGLQYLHS-NGILHRDIKGSNILINNDGVLKLADFGLARP 149 (287)
T ss_pred CcEEEEeccccccHHHHHhccCC--CCCHHHHHHHHHHHHHHHHHHHH-CCceeccCcHHHeEEcCCCCEEEccccceee
Confidence 4899999999 578777765421 22344466779999999999995 8999999999999999999999999999987
Q ss_pred cCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----h-------
Q 004025 179 FDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R------- 247 (778)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~------- 247 (778)
........ .........|+|||.+.+. ..++.++|+|||||++|||++|..+|..... .
T Consensus 150 ~~~~~~~~-----~~~~~~~~~y~~PE~~~~~-----~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~ 219 (287)
T cd07840 150 YTKRNSAD-----YTNRVITLWYRPPELLLGA-----TRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCG 219 (287)
T ss_pred ccCCCccc-----ccccccccccCCceeeEcc-----ccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Confidence 75532100 0111234579999987642 2456789999999999999999988743210 0
Q ss_pred -------------------------------ccCC-CCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -------------------------------NTAS-IPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -------------------------------~~~~-iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.... ++..+.+++++||+.+|.+||++.++++++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~ 285 (287)
T cd07840 220 SPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHE 285 (287)
T ss_pred CCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCc
Confidence 0011 266788899999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-29 Score=269.54 Aligned_cols=237 Identities=17% Similarity=0.299 Sum_probs=190.4
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~ 99 (778)
|++.+.+|.|. | .||.|+.+.+++.|+||++......+...+.+.+|+.+++.++||||+++++.++..
T Consensus 1 y~~~~~ig~g~~~--~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-------- 70 (282)
T cd07829 1 YEKLEKLGEGTYG--VVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTE-------- 70 (282)
T ss_pred CeeehcccccCcc--eEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcC--------
Confidence 67788899887 7 899999999999999999987653444456778899999999999999999999864
Q ss_pred cEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccc
Q 004025 100 ITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (778)
Q Consensus 100 ~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~ 178 (778)
..+|+|+||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++..
T Consensus 71 ~~~~~v~e~~~~~l~~~i~~~~~--~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~ 147 (282)
T cd07829 71 RKLYLVFEYCDMDLKKYLDKRPG--PLSPNLIKSIMYQLLRGLAYCHS-HRILHRDLKPQNILINRDGVLKLADFGLARA 147 (282)
T ss_pred CceEEEecCcCcCHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCChheEEEcCCCCEEEecCCcccc
Confidence 3899999999 579998887631 12344466679999999999995 8999999999999999999999999999887
Q ss_pred cCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh------------
Q 004025 179 FDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------------ 246 (778)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l------------ 246 (778)
....... .........|+|||.+.+. ..++.++|+|||||++||+++|.++|.....
T Consensus 148 ~~~~~~~------~~~~~~~~~~~aPE~~~~~-----~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 216 (282)
T cd07829 148 FGIPLRT------YTHEVVTLWYRAPEILLGS-----KHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILG 216 (282)
T ss_pred cCCCccc------cCccccCcCcCChHHhcCC-----cCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhC
Confidence 6542210 0111234479999998653 3567789999999999999999888753210
Q ss_pred -----------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 -----------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 -----------------------------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....++..+.+++++||..+|.+||++.+++.|+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p 280 (282)
T cd07829 217 TPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHP 280 (282)
T ss_pred CCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCc
Confidence 00123466788999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.5e-30 Score=268.53 Aligned_cols=236 Identities=17% Similarity=0.228 Sum_probs=186.6
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
..+|++.+.+|.|+ | +||+|+.+. +..|++|++..... .....+.+|+.+++.++||||+++++.+...
T Consensus 5 ~~~y~~~~~ig~g~~~--~vy~~~~~~-~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----- 74 (261)
T cd05148 5 REEFTLERKLGSGYFG--EVWEGLWKN-RVRVAIKILKSDDL--LKQQDFQKEVQALKRLRHKHLISLFAVCSVG----- 74 (261)
T ss_pred HHHHHHhhhhccCCCc--cEEEeEecC-CCcEEEEeccccch--hhHHHHHHHHHHHhcCCCcchhheeeeEecC-----
Confidence 45799999999998 8 899999987 99999999876432 2345688999999999999999999998764
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+|+||||+ ++|.+++...... ......+..++.||+.||.|||+ .+++|+||+|+||+|+.++.+||+|||
T Consensus 75 ---~~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~i~~al~~lH~-~~i~h~dl~~~nilv~~~~~~kl~d~g 149 (261)
T cd05148 75 ---EPVYIITELMEKGSLLAFLRSPEGQ-VLPVASLIDMACQVAEGMAYLEE-QNSIHRDLAARNILVGEDLVCKVADFG 149 (261)
T ss_pred ---CCeEEEEeecccCCHHHHHhcCCCC-CCCHHHHHHHHHHHHHHHHHHHH-CCeeccccCcceEEEcCCceEEEcccc
Confidence 3799999999 4899999764321 22334455668999999999995 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR------ 247 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~------ 247 (778)
++......... ......+..|++||.... ..++.++|+|||||++|+|++ |..||......
T Consensus 150 ~~~~~~~~~~~------~~~~~~~~~~~~PE~~~~------~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~ 217 (261)
T cd05148 150 LARLIKEDVYL------SSDKKIPYKWTAPEAASH------GTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQI 217 (261)
T ss_pred chhhcCCcccc------ccCCCCceEecCHHHHcc------CCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHH
Confidence 99876442110 111223347999999865 356678999999999999998 77777432111
Q ss_pred -------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 -------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 -------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+|..+.+++.+||+.+|.+||++.++++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~ 257 (261)
T cd05148 218 TAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREE 257 (261)
T ss_pred HhCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 113466788999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=268.11 Aligned_cols=236 Identities=18% Similarity=0.160 Sum_probs=182.3
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
+..+|++.+++|.|+ | +||.|+++.+ ..|+||++...... .+.+++|+..+++++||||+++++.++.
T Consensus 4 ~~~~~~~~~~lg~g~~~--~v~~~~~~~~-~~valK~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~~----- 72 (262)
T cd05071 4 PRESLRLEVKLGQGCFG--EVWMGTWNGT-TRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSE----- 72 (262)
T ss_pred ChHHeeEeeecCCCCCC--cEEEEEecCC-ceEEEEecccCccC---HHHHHHHHHHHHhCCCCCcceEEEEECC-----
Confidence 345799999999998 8 8999988755 46999998754322 3467889999999999999999988753
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
...|+||||+ ++|.+++...... ......+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+||
T Consensus 73 ----~~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~l~~aL~~lH~-~~i~H~dl~p~Nill~~~~~~~L~df 146 (262)
T cd05071 73 ----EPIYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVER-MNYVHRDLRAANILVGENLVCKVADF 146 (262)
T ss_pred ----CCcEEEEEcCCCCcHHHHHhhcccc-CCCHHHHHHHHHHHHHHHHHHHH-CCccccccCcccEEEcCCCcEEeccC
Confidence 2579999999 5899998763211 12233455569999999999995 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh----h-
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL----R- 247 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l----~- 247 (778)
|++..+....... ......+..|++||+..+ ..++.++|+|||||++|+|++ |..||..... .
T Consensus 147 g~~~~~~~~~~~~-----~~~~~~~~~y~~PE~~~~------~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~ 215 (262)
T cd05071 147 GLARLIEDNEYTA-----RQGAKFPIKWTAPEAALY------GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 215 (262)
T ss_pred Cceeecccccccc-----ccCCcccceecCHhHhcc------CCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHH
Confidence 9998765422100 111123347999998765 356789999999999999999 6667643211 1
Q ss_pred --------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 --------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 --------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+|..+.+++.+|++.+|.+||++.++++-
T Consensus 216 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~ 256 (262)
T cd05071 216 VERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAF 256 (262)
T ss_pred HhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHH
Confidence 113467889999999999999999999988763
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.8e-30 Score=279.16 Aligned_cols=245 Identities=22% Similarity=0.318 Sum_probs=193.4
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.||.|+ | .||+|+...+|+.|+||.+..........+.+.+|+.+++.++||||+++++.+...... .
T Consensus 1 ~y~i~~~ig~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~---~ 75 (330)
T cd07834 1 RYELLKPIGSGAYG--VVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPE---D 75 (330)
T ss_pred CceeeeeecCCCCe--EEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcc---c
Confidence 589999999998 8 899999998999999999986543334556788999999999999999999998764211 1
Q ss_pred ccEEEEEecCCc-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 99 KITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 99 ~~~lyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
...+|+||||+. +|.+++.... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++.
T Consensus 76 ~~~~~lv~e~~~~~l~~~l~~~~---~l~~~~~~~i~~~l~~~l~~LH~-~gi~H~dlkp~nili~~~~~~~L~dfg~~~ 151 (330)
T cd07834 76 FNDVYIVTELMETDLHKVIKSPQ---PLTDDHIQYFLYQILRGLKYLHS-ANVIHRDLKPSNILVNSNCDLKICDFGLAR 151 (330)
T ss_pred ccceEEEecchhhhHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCCCEEEcccCceE
Confidence 247899999994 6888876543 22344566779999999999995 899999999999999999999999999998
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh----------
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---------- 247 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~---------- 247 (778)
........ ........++..|+|||++.+. ..++.++|+|||||++|+|++|.++|......
T Consensus 152 ~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~ 223 (330)
T cd07834 152 GVDPDEDE---KGFLTEYVVTRWYRAPELLLSS-----SRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVL 223 (330)
T ss_pred eecccccc---cccccccccccCcCCceeeecc-----cCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhc
Confidence 77553210 0011122344579999998763 25678999999999999999999887432100
Q ss_pred ---------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ---------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ---------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|..+.+++.+||..+|.+||++.++++|+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 290 (330)
T cd07834 224 GTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHP 290 (330)
T ss_pred CCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCc
Confidence 0123566788899999999999999999999998
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=269.34 Aligned_cols=249 Identities=15% Similarity=0.218 Sum_probs=190.8
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~ 94 (778)
+..+|++.+.+|.|+ | .||.|+++.+++.|++|++.... .....+.+|+..++++ +||||+++++.+......
T Consensus 14 ~~~~~~~~~~lg~g~~~--~v~~~~~~~~~~~~a~K~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 88 (282)
T cd06636 14 PAGIFELVEVVGNGTYG--QVYKGRHVKTGQLAAIKVMDVTE---DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPP 88 (282)
T ss_pred hhhhhhhheeeccCCCe--EEEEEEEcCCCcEEEEEEEecCh---HHHHHHHHHHHHHHHhcCCCcEEEEeeehhccccc
Confidence 345799999999987 6 99999999999999999987642 2334678899999998 699999999998642210
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
.....+|++|||+ ++|.+++...... ......+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+|
T Consensus 89 --~~~~~~~iv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH~-~~ivH~dl~~~nili~~~~~~~l~d 164 (282)
T cd06636 89 --GHDDQLWLVMEFCGAGSVTDLVKNTKGN-ALKEDWIAYICREILRGLAHLHA-HKVIHRDIKGQNVLLTENAEVKLVD 164 (282)
T ss_pred --CCCCEEEEEEEeCCCCcHHHHHHHccCC-CCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCCCEEEee
Confidence 1135899999999 4798888764322 23345567779999999999995 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-hh----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-LR---- 247 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-l~---- 247 (778)
||++......... .....+...|+|||++...-. ....++.++|+|||||++|||++|..||.... ..
T Consensus 165 fg~~~~~~~~~~~------~~~~~~~~~y~aPE~l~~~~~-~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~ 237 (282)
T cd06636 165 FGVSAQLDRTVGR------RNTFIGTPYWMAPEVIACDEN-PDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFL 237 (282)
T ss_pred CcchhhhhccccC------CCcccccccccCHhhcCcccC-cCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhh
Confidence 9998765432110 111234458999998753210 11346678999999999999999998874321 11
Q ss_pred --c-------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 --N-------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 --~-------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ...+|..+.+++.+||+.||.+||++.++++|+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~ 280 (282)
T cd06636 238 IPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHP 280 (282)
T ss_pred HhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCC
Confidence 0 123577889999999999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-29 Score=268.58 Aligned_cols=238 Identities=17% Similarity=0.164 Sum_probs=188.2
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+++|.|. | .||.|.++.+++.|++|.+...... .....+.+|++++++++||||+++++.+..+.
T Consensus 2 ~~~~~~~lg~g~~~--~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~------ 72 (287)
T cd06621 2 KIVELSRLGEGAGG--SVTKCRLKNTGMIFALKTITTDPNP-DLQKQILRELEINKSCKSPYIVKYYGAFLDES------ 72 (287)
T ss_pred ceEEEEEeccCCce--EEEEEEECCCCeEEEEEEEecCCch-HHHHHHHHHHHHHHhCCCCCeeeeeeEEEccC------
Confidence 588899999998 7 8999999999999999999864332 34567889999999999999999999986543
Q ss_pred ccEEEEEecCC--cChHHHHHHhCc-CCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
...+|+||||+ ++|.+++..... ........+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+|||+
T Consensus 73 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~-~~i~H~dl~~~nil~~~~~~~~l~dfg~ 151 (287)
T cd06621 73 SSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHS-RKIIHRDIKPSNILLTRKGQVKLCDFGV 151 (287)
T ss_pred CCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEEecCCeEEEeeccc
Confidence 34799999999 478887765321 1222344566779999999999995 9999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh---------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------- 246 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l--------- 246 (778)
+........ ........|++||.+.+ ..++.++|+|+|||++|+|++|..|+.....
T Consensus 152 ~~~~~~~~~--------~~~~~~~~y~~pE~~~~------~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 217 (287)
T cd06621 152 SGELVNSLA--------GTFTGTSFYMAPERIQG------KPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELL 217 (287)
T ss_pred ccccccccc--------ccccCCccccCHHHhcC------CCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHH
Confidence 876543211 01123457999999875 3567789999999999999999988754310
Q ss_pred h---c--c----------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 R---N--T----------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ~---~--~----------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. . . ...+..+.+++.+||..+|.+||++.++++|+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~ 267 (287)
T cd06621 218 SYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHP 267 (287)
T ss_pred HHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCc
Confidence 0 0 0 01234578899999999999999999999998
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.8e-30 Score=273.29 Aligned_cols=236 Identities=17% Similarity=0.218 Sum_probs=190.0
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|++.+.+|.|+ | +||+|..+.++..|+||.+..... ...+.+.+|+.+++.++||||+++++.+...
T Consensus 17 ~~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~---- 88 (293)
T cd06647 17 PKKKYTRFEKIGQGASG--TVYTAIDVATGQEVAIKQMNLQQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVG---- 88 (293)
T ss_pred chhhceeeeEecCCCCe--EEEEEEEcCCCCEEEEEEeccccc--hHHHHHHHHHHHHhhcCCCCeeehhheeeeC----
Confidence 456899999999998 7 999999998999999999875422 2345688999999999999999999999864
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
...|+|+||+ ++|.+++.+... ....+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+||
T Consensus 89 ----~~~~lv~e~~~~~~L~~~~~~~~l----~~~~~~~i~~~l~~al~~LH~-~gi~H~dL~p~Nili~~~~~~kL~df 159 (293)
T cd06647 89 ----DELWVVMEYLAGGSLTDVVTETCM----DEGQIAAVCRECLQALEFLHS-NQVIHRDIKSDNILLGMDGSVKLTDF 159 (293)
T ss_pred ----CcEEEEEecCCCCcHHHHHhhcCC----CHHHHHHHHHHHHHHHHHHHh-CCEeeccCCHHHEEEcCCCCEEEccC
Confidence 3799999999 479888876432 233456679999999999995 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----hc-
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN- 248 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~~- 248 (778)
|++......... .....+...|++||.+.. ..++.++|+|||||++|++++|..||..... ..
T Consensus 160 g~~~~~~~~~~~------~~~~~~~~~y~~PE~~~~------~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~ 227 (293)
T cd06647 160 GFCAQITPEQSK------RSTMVGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI 227 (293)
T ss_pred cceecccccccc------cccccCChhhcCchhhcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeeh
Confidence 998766442211 111233457999999865 2456789999999999999999998864321 10
Q ss_pred ----------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ----------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++.+||..+|..||++.+++.|+
T Consensus 228 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~ 270 (293)
T cd06647 228 ATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHP 270 (293)
T ss_pred hcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCH
Confidence 123455688999999999999999999999997
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-31 Score=290.28 Aligned_cols=242 Identities=19% Similarity=0.259 Sum_probs=196.4
Q ss_pred CCCCceecc-----CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEe
Q 004025 17 KDLPYNIGD-----PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (778)
Q Consensus 17 ~~~~Y~i~~-----~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~ 90 (778)
..|.|+..+ .+|.|. | +||-|+++.+...++||.+..+.. ...+-+..|+...++|+|.||++|++++..
T Consensus 568 iefeYeyde~~ervVLGKGTYG--~VYA~RD~~tqvrIaIKEIpekds--r~~QPLhEEIaLH~~LrHkNIVrYLGs~se 643 (1226)
T KOG4279|consen 568 IEFEYEYDESNERVVLGKGTYG--TVYAARDMDTQVRIAIKEIPEKDS--REVQPLHEEIALHSTLRHKNIVRYLGSVSE 643 (1226)
T ss_pred eEEEeeecCCCceEEeecCcee--EEEeeccccceeEEEeeecccccc--hhhccHHHHHHHHHHHhhHhHHHHhhccCC
Confidence 346777765 267777 8 999999999999999999986543 345678899999999999999999999865
Q ss_pred cccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEc-CCCc
Q 004025 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT-QTLD 167 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~-~~g~ 167 (778)
+ .++-|.||.| |+|+.+|+..--.-...+..+.++..||++||+||| +..|||||||-+||+|+ -+|-
T Consensus 644 n--------Gf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLH-en~IVHRDIKGDNVLvNTySGv 714 (1226)
T KOG4279|consen 644 N--------GFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLH-ENKIVHRDIKGDNVLVNTYSGV 714 (1226)
T ss_pred C--------CeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhh-hcceeeccccCCcEEEeeccce
Confidence 3 3899999999 689999987432222345567778999999999999 59999999999999998 7899
Q ss_pred EEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCCh---h
Q 004025 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT---E 244 (778)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~---~ 244 (778)
+||.|||-++.+...+.. .-.+.++.+|||||++..+- .+|..++|||||||.+.||.+|+|||-. .
T Consensus 715 lKISDFGTsKRLAginP~------TETFTGTLQYMAPEvIDqG~----RGYG~aADIWS~GCT~vEMATGrPPF~Elgsp 784 (1226)
T KOG4279|consen 715 LKISDFGTSKRLAGINPC------TETFTGTLQYMAPEVIDQGP----RGYGKAADIWSFGCTMVEMATGRPPFVELGSP 784 (1226)
T ss_pred EEecccccchhhccCCcc------ccccccchhhhChHhhccCC----cCCCchhhhhhccceeEeeccCCCCeeecCCh
Confidence 999999999988764321 12345667999999998763 6899999999999999999999999831 1
Q ss_pred h--------hhccCCCCcchH----HHHHHHhccCCCCCCChHHHHhcc
Q 004025 245 E--------LRNTASIPKSLL----PDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 245 ~--------l~~~~~iP~~L~----~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+ .+.-..||.++. ..+.+|+.++|..||++.++|+.+
T Consensus 785 qAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~Dp 833 (1226)
T KOG4279|consen 785 QAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDP 833 (1226)
T ss_pred hHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCc
Confidence 1 112256787664 568899999999999999999987
|
|
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-29 Score=268.63 Aligned_cols=249 Identities=17% Similarity=0.148 Sum_probs=189.8
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~ 94 (778)
...+|++.+.+|.|. | .||+++.+.+++.|+||++..... ....+.+|+.+++.+ +||||+++++.+......
T Consensus 20 ~~~~y~~~~~l~~g~~~--~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~ 94 (291)
T cd06639 20 PTDTWEIIETIGKGTYG--KVYKVTNKKDGSLAAVKILDPISD---VDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKL 94 (291)
T ss_pred CCCCeEEEEEeecCCCe--EEEEEEECCCCCEEEEEEeccccc---HHHHHHHHHHHHHHhcCCCCeEEEEEEEEecccc
Confidence 456899999999998 8 899999999999999999875422 234577899999998 799999999998754311
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCc-CCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
....+|+||||+ ++|.++++.... ........+..++.||+.||.|||+ .+++||||||+||+++.++.+||+
T Consensus 95 ---~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~ivH~dlkp~nili~~~~~~kl~ 170 (291)
T cd06639 95 ---VGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHN-NRIIHRDVKGNNILLTTEGGVKLV 170 (291)
T ss_pred ---CCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHEEEcCCCCEEEe
Confidence 024799999999 478888865321 1223345567779999999999995 899999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hh
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LR 247 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~ 247 (778)
|||++......... .....+...|+|||++...- .....++.++|+|||||++|||++|.+||.... +.
T Consensus 171 dfg~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~-~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~ 243 (291)
T cd06639 171 DFGVSAQLTSTRLR------RNTSVGTPFWMAPEVIACEQ-QYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLF 243 (291)
T ss_pred ecccchhccccccc------ccCccCCccccChhhhcCCC-CcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHH
Confidence 99998876532111 11113345799999876421 001235679999999999999999998874321 11
Q ss_pred c-----------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 N-----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ~-----------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ...++..+.+++.+||..+|..||++.++++|+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~ 288 (291)
T cd06639 244 KIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHP 288 (291)
T ss_pred HHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCc
Confidence 1 112344578899999999999999999999998
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-30 Score=272.78 Aligned_cols=235 Identities=20% Similarity=0.274 Sum_probs=175.5
Q ss_pred eeccCCCCCC-CceEEEEeEEC----CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 22 NIGDPYPSAW-GSWSHFQGTSK----DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 22 ~i~~~lg~g~-g~w~Vy~g~~k----~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
++.+.||.|. | .||+|..+ ..+..|+||.+... ......+.+.+|++.+++++||||+++++++...
T Consensus 2 ~~~~~ig~G~fg--~v~~~~~~~~~~~~~~~V~vk~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~----- 73 (259)
T PF07714_consen 2 KLIKQIGEGSFG--KVYRAEWKQKDNDKNQPVAVKILKPS-SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIEN----- 73 (259)
T ss_dssp EEEEEEEEESSE--EEEEEEEESTTTSSEEEEEEEEESTT-SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESS-----
T ss_pred EEeeEEccCCCc--EEEEEEEEcccCCCCEEEEEEEeccc-cccccceeeeeccccccccccccccccccccccc-----
Confidence 4567899998 8 89999988 44678999999543 3334467889999999999999999999999843
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+++||||+ ++|.++|....... .....+..++.||+.||.|||+ .+++||||++.|||++.++.+||+|||
T Consensus 74 ---~~~~lv~e~~~~g~L~~~L~~~~~~~-~~~~~~~~i~~~i~~~l~~Lh~-~~iiH~~l~~~nill~~~~~~Kl~~f~ 148 (259)
T PF07714_consen 74 ---EPLFLVMEYCPGGSLDDYLKSKNKEP-LSEQQRLSIAIQIAEALSYLHS-NNIIHGNLSPSNILLDSNGQVKLSDFG 148 (259)
T ss_dssp ---SSEEEEEE--TTEBHHHHHHHTCTTT-SBHHHHHHHHHHHHHHHHHHHH-TTEEEST-SGGGEEEETTTEEEEESTT
T ss_pred ---cccccccccccccccccccccccccc-cccccccccccccccccccccc-ccccccccccccccccccccccccccc
Confidence 2599999999 58999999872222 2233455569999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhh-------h
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE-------L 246 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~-------l 246 (778)
+......... ............|+|||.+.+. .++.++||||||++|||+++ |..++.... +
T Consensus 149 ~~~~~~~~~~----~~~~~~~~~~~~~~aPE~~~~~------~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~ 218 (259)
T PF07714_consen 149 LSRPISEKSK----YKNDSSQQLPLRYLAPEVLKDG------EYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKL 218 (259)
T ss_dssp TGEETTTSSS----EEESTTSESGGGGS-HHHHHHS------EESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHH
T ss_pred cccccccccc----cccccccccccccccccccccc------cccccccccccccccccccccccccccccccccccccc
Confidence 9987733211 0011112233489999998774 36789999999999999999 566664311 1
Q ss_pred ------hccCCCCcchHHHHHHHhccCCCCCCChHHHHh
Q 004025 247 ------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 247 ------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
.....+|..+.+++.+||..+|.+||++.++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 219 KQGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp HTTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred cccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 112356778999999999999999999999875
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-29 Score=264.83 Aligned_cols=234 Identities=14% Similarity=0.161 Sum_probs=181.4
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..|++.+.+|.|+ | .||.++.+ ++..+++|.+...... ...+.+|+..|+.++||||++++++++..
T Consensus 4 ~~~~~~~~lg~G~~~--~vy~~~~~-~~~~~a~K~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 71 (256)
T cd05114 4 SELTFMKELGSGQFG--VVHLGKWR-AQIKVAIKAINEGAMS---EEDFIEEAKVMMKLSHPKLVQLYGVCTQQ------ 71 (256)
T ss_pred HHcEEeeEecCCcCc--eEEEEEec-cCceEEEEecccCCcc---HHHHHHHHHHHHHCCCCCceeEEEEEccC------
Confidence 3589999999998 8 89999876 4668999988643222 34578899999999999999999998763
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+|||+
T Consensus 72 --~~~~iv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~ni~i~~~~~~kl~d~g~ 146 (256)
T cd05114 72 --KPLYIVTEFMENGCLLNYLRQRQG--KLSKDMLLSMCQDVCEGMEYLER-NSFIHRDLAARNCLVSSTGVVKVSDFGM 146 (256)
T ss_pred --CCEEEEEEcCCCCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHH-CCccccccCcceEEEcCCCeEEECCCCC
Confidence 3799999999 579888875431 12344566779999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh----hc--
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL----RN-- 248 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l----~~-- 248 (778)
+......... .......+..|+|||++.+ ..++.++|+|||||++|||++ |..||..... ..
T Consensus 147 ~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~ 215 (256)
T cd05114 147 TRYVLDDEYT-----SSSGAKFPVKWSPPEVFNF------SKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMIS 215 (256)
T ss_pred ccccCCCcee-----ccCCCCCchhhCChhhccc------CccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 8765432110 0111122347999999875 356779999999999999999 7877753211 11
Q ss_pred -------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 249 -------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 249 -------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+..+..++.+|+..+|.+||++.++++.
T Consensus 216 ~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~ 254 (256)
T cd05114 216 RGFRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRA 254 (256)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 11234568899999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-29 Score=262.66 Aligned_cols=234 Identities=18% Similarity=0.225 Sum_probs=185.1
Q ss_pred cCCCCCC-CceEEEEeEECCC---CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCccc
Q 004025 25 DPYPSAW-GSWSHFQGTSKDD---GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKI 100 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~---g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~ 100 (778)
+.||.|+ | .||+|..... +..|+||.+....... ....+.+|++.++.++||||+++++++... .
T Consensus 1 ~~ig~g~~g--~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--------~ 69 (262)
T cd00192 1 KKLGEGAFG--EVYKGKLKGKDGKTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLGHPNVVRLLGVCTEE--------E 69 (262)
T ss_pred CccccCCce--EEEEEEEecCCCCCceEEeEeeccccchh-HHHHHHHHHHHHhhcCCCChheeeeeecCC--------C
Confidence 3577777 7 8999999876 8999999998654433 467789999999999999999999999863 3
Q ss_pred EEEEEecCC--cChHHHHHHhCc------CCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 101 TIYIVTEPV--MPLSEKIKELGL------EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 101 ~lyIVtE~v--~~L~~~L~~~~~------~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
.+|+||||+ ++|.+++..... ........+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+|
T Consensus 70 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~-~~i~H~di~p~nili~~~~~~~l~d 148 (262)
T cd00192 70 PLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS-KKFVHRDLAARNCLVGEDLVVKISD 148 (262)
T ss_pred ceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHc-CCcccCccCcceEEECCCCcEEEcc
Confidence 899999999 579999887521 1223445567779999999999995 9999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh-----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL----- 246 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l----- 246 (778)
||++......... ........+..|+|||.+.+. .++.++|+|||||++|+|++ |..||.....
T Consensus 149 fg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~ 218 (262)
T cd00192 149 FGLSRDVYDDDYY----RKKTGGKLPIRWMAPESLKDG------IFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLE 218 (262)
T ss_pred ccccccccccccc----ccccCCCcCccccCHHHhccC------CcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence 9999877653210 001112334589999998763 56789999999999999998 5777653211
Q ss_pred --------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 247 --------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 247 --------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
.....+|..+.+++.+||..+|..||++.+++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 219 YLRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred HHHcCCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 1123467789999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-29 Score=265.68 Aligned_cols=245 Identities=12% Similarity=0.136 Sum_probs=184.5
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCC--cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGS--PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~--~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
|.+++.+|.|+ | .||+|+.+.++. .|+||.+..........+.+.+|++.++.++||||+++++.+.......
T Consensus 1 ~~i~~~ig~G~~g--~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~-- 76 (272)
T cd05075 1 LALGKTLGEGEFG--SVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESE-- 76 (272)
T ss_pred CccccccCcccCc--eEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCccc--
Confidence 56889999998 8 899999887775 6999998765444555677889999999999999999998764322110
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcC---CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLE---GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~---~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
.....++++||+ ++|..++...... .......+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|
T Consensus 77 ~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~Nil~~~~~~~kl~D 155 (272)
T cd05075 77 GYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSS-KSFIHRDLAARNCMLNENMNVCVAD 155 (272)
T ss_pred CCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHH-CCeeccccchhheEEcCCCCEEECC
Confidence 023679999999 5788877543321 112234455668999999999995 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh-----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL----- 246 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l----- 246 (778)
||++..+........ ......+..|++||...+ ..++.++|+|||||++|||++ |..||.....
T Consensus 156 fg~~~~~~~~~~~~~----~~~~~~~~~~~~pe~~~~------~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~ 225 (272)
T cd05075 156 FGLSKKIYNGDYYRQ----GRIAKMPVKWIAIESLAD------RVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYD 225 (272)
T ss_pred CCcccccCcccceec----CCcccCCcccCCHHHccC------CCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 999887654211000 011123347999999876 356789999999999999999 6777743211
Q ss_pred --h------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 247 --R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 247 --~------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. ....++..+.+++.+||..+|.+||++.++++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 226 YLRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred HHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 1 123456678899999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-29 Score=263.92 Aligned_cols=237 Identities=17% Similarity=0.223 Sum_probs=191.3
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.++.|. | .||+++++.+++.|+||.+......+.....+.+|++.++.++||||+++++.+...
T Consensus 1 ~y~~~~~i~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 71 (256)
T cd08530 1 DFKVLKKLGKGSYG--SVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDG------- 71 (256)
T ss_pred CceEeeeecCCCce--eEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccC-------
Confidence 489999999987 6 899999999999999999987554444456678899999999999999999999864
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcC-CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLE-GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~-~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
...|+|+||+ ++|..++...... .......+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+|||+
T Consensus 72 -~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~-~~i~h~~l~~~ni~~~~~~~~kl~d~g~ 149 (256)
T cd08530 72 -NKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHE-QKILHRDLKSANILLVANDLVKIGDLGI 149 (256)
T ss_pred -CEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCcceEEEecCCcEEEeeccc
Confidence 4899999999 4798888763321 122344566679999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc-------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------- 248 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~------- 248 (778)
+....... .........|++||...+ ..++.++|+||||+++|+|++|..||.......
T Consensus 150 ~~~~~~~~--------~~~~~~~~~~~~Pe~~~~------~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~ 215 (256)
T cd08530 150 SKVLKKNM--------AKTQIGTPHYMAPEVWKG------RPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQR 215 (256)
T ss_pred hhhhccCC--------cccccCCccccCHHHHCC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Confidence 87765421 111233458999999865 356678999999999999999998886432211
Q ss_pred ------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++.+||+.+|.+||++.++++||
T Consensus 216 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p 254 (256)
T cd08530 216 GKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASP 254 (256)
T ss_pred CCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCC
Confidence 023456688999999999999999999999997
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-29 Score=264.50 Aligned_cols=234 Identities=17% Similarity=0.182 Sum_probs=182.3
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.+|.|. | .||.|.++ ++..++||++...... ...+.+|+.+++.++||||+++++.++..
T Consensus 4 ~~~~~~~~lg~G~~~--~v~~~~~~-~~~~~~iK~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------ 71 (256)
T cd05059 4 SELTFLKELGSGQFG--VVHLGKWR-GKIDVAIKMIREGAMS---EDDFIEEAKVMMKLSHPNLVQLYGVCTKQ------ 71 (256)
T ss_pred HHcchhhhhccCCCc--eEEEeEec-CCccEEEEEeccCCCC---HHHHHHHHHHHHhCCCCCEEEEEEEEcCC------
Confidence 3589999999998 8 89999886 5778999998754322 23577899999999999999999998753
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+|+||||+ +.|.+++..... ......+..++.||+.||.|||+ .+++||||||+|||++.+|.+||+|||+
T Consensus 72 --~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~-~~i~H~dl~p~ni~i~~~~~~kl~dfg~ 146 (256)
T cd05059 72 --RPIFIVTEYMANGCLLNYLRERKG--KLGTEWLLDMCSDVCEAMEYLES-NGFIHRDLAARNCLVGEDNVVKVSDFGL 146 (256)
T ss_pred --CceEEEEecCCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHH-CCcccccccHhhEEECCCCcEEECCccc
Confidence 3789999999 469998876432 22344566779999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhh-------hh
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE-------LR 247 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~-------l~ 247 (778)
++...+..... ......+..|+|||.+.+ ..++.++|+|||||++|++++ |..||.... +.
T Consensus 147 ~~~~~~~~~~~-----~~~~~~~~~y~~Pe~~~~------~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~ 215 (256)
T cd05059 147 ARYVLDDQYTS-----SQGTKFPVKWAPPEVFDY------SRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVS 215 (256)
T ss_pred ceecccccccc-----cCCCCCCccccCHHHhcc------CCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH
Confidence 87664321100 001112237999999876 356778999999999999998 677764321 11
Q ss_pred ------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 ------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 ------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
.....|..+.+++.+||+.+|.+||++.++++.
T Consensus 216 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 216 AGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred cCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 112356779999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=270.81 Aligned_cols=237 Identities=17% Similarity=0.154 Sum_probs=191.5
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|++.+.+|.|. | +||++.++.+|+.|++|++.... .....+.+.+|+++++.++||||+++++.+...
T Consensus 3 ~~~~~~~~~~ig~g~~g--~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---- 75 (284)
T cd06620 3 RNEDLETISDLGAGNGG--SVSKVKHIPTGTVMAKKVVHIGA-KSSVRKQILRELQIMHECRSPYIVSFYGAFLNE---- 75 (284)
T ss_pred cHHHHHHHHHcCCCCCe--EEEEEEEcCCCcEEEEEEEEecC-cchHHHHHHHHHHHHHHcCCCCcceEeeeEecC----
Confidence 345799999999998 7 99999999999999999987543 233456789999999999999999999999874
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..+|+||||+ ++|..++...+. .....+..++.|++.||.|||+..+++||||+|+||+++.++.++|+||
T Consensus 76 ----~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~ 148 (284)
T cd06620 76 ----NNICMCMEFMDCGSLDRIYKKGGP---IPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDF 148 (284)
T ss_pred ----CEEEEEEecCCCCCHHHHHHhccC---CCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccC
Confidence 3899999999 478888876432 2344566779999999999996568999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------- 246 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l------- 246 (778)
|++........ ....++..|+|||++.+. .++.++|+|||||++|++++|..||.....
T Consensus 149 gl~~~~~~~~~--------~~~~~~~~~~aPE~~~~~------~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~ 214 (284)
T cd06620 149 GVSGELINSIA--------DTFVGTSTYMSPERIQGG------KYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDD 214 (284)
T ss_pred Ccccchhhhcc--------CccccCcccCCHHHHccC------CCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhh
Confidence 99865532110 012345589999998653 566789999999999999999998853211
Q ss_pred --------hc-----c-----CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 --------RN-----T-----ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 --------~~-----~-----~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. . ..+|..+.+++.+||..||..||++.++++++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 215 PMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred hhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 00 0 12566788999999999999999999999997
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-29 Score=267.55 Aligned_cols=241 Identities=18% Similarity=0.274 Sum_probs=185.8
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC---CCCCeeeEeeeeEecccccC
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV---RHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L---rHPnIlk~~d~~e~e~~~g~ 96 (778)
|++.+.+|.|. | .||+|+++.+++.|+||++......+.....+.+|+..++++ +||||+++++++......+
T Consensus 1 y~~~~~l~~g~~~--~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~- 77 (287)
T cd07838 1 YEELAEIGEGAYG--TVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDR- 77 (287)
T ss_pred CeEEEEecccCce--EEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCC-
Confidence 78889999988 8 899999998999999999986544433344566777776665 5999999999998643211
Q ss_pred CcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 97 ~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
...+|++|||+ +.|.+++...... ......+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+|||+
T Consensus 78 --~~~~~l~~e~~~~~l~~~l~~~~~~-~l~~~~~~~~~~~i~~al~~LH~-~~i~h~~l~~~nili~~~~~~~l~dfg~ 153 (287)
T cd07838 78 --ELKLTLVFEHVDQDLATYLSKCPKP-GLPPETIKDLMRQLLRGVDFLHS-HRIVHRDLKPQNILVTSDGQVKIADFGL 153 (287)
T ss_pred --CceeEEEehhcccCHHHHHHHccCC-CCCHHHHHHHHHHHHHHHHHHHH-CCeeeccCChhhEEEccCCCEEEeccCc
Confidence 23599999999 5788888764321 22344567779999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----hc---
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN--- 248 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~~--- 248 (778)
+......... ....+...|++||++.+ ..++.++|+|||||++|+|++|.++|..... ..
T Consensus 154 ~~~~~~~~~~-------~~~~~~~~~~~PE~~~~------~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~ 220 (287)
T cd07838 154 ARIYSFEMAL-------TSVVVTLWYRAPEVLLQ------SSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFD 220 (287)
T ss_pred ceeccCCccc-------ccccccccccChHHhcc------CCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHH
Confidence 8876542110 11123457999999876 3566789999999999999999888753210 00
Q ss_pred --------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 --------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 --------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++++||..+|.+||++.+++.|+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~ 285 (287)
T cd07838 221 VIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHP 285 (287)
T ss_pred HcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCc
Confidence 012345567789999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-29 Score=271.73 Aligned_cols=242 Identities=16% Similarity=0.183 Sum_probs=187.6
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.++.|. | .||++.++.+++.|+||.+...... ......+.+|+++++.++||||+++++.++.+
T Consensus 2 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------ 73 (305)
T cd05609 2 DFETIKLISNGAYG--AVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETK------ 73 (305)
T ss_pred CceEeeEeecCCCe--eEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecC------
Confidence 689999999998 7 8999999999999999998865322 23455778999999999999999999999863
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
.++|+||||+ ++|.++++.... .....+..++.|++.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~e~~~g~~L~~~l~~~~~---~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~NIll~~~~~~~l~dfg~ 147 (305)
T cd05609 74 --RHLCMVMEYVEGGDCATLLKNIGA---LPVDMARMYFAETVLALEYLHN-YGIVHRDLKPDNLLITSMGHIKLTDFGL 147 (305)
T ss_pred --CEEEEEEecCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCccccCCchHHEEECCCCCEEEeeCCC
Confidence 4899999999 479999876542 2334455568899999999995 8999999999999999999999999998
Q ss_pred ccccCCCCCCC---------CCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh
Q 004025 176 LSEFDGNNEAA---------NGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL 246 (778)
Q Consensus 176 a~~~~~~~~~~---------~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l 246 (778)
+.......... ..........+...|+|||.+.+ ..++.++|+|||||++||+++|..||.....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~vl~el~~g~~pf~~~~~ 221 (305)
T cd05609 148 SKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILR------QGYGKPVDWWAMGIILYEFLVGCVPFFGDTP 221 (305)
T ss_pred ccccCcCccccccccccccchhhccccCCccCccccCchhccC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 76421110000 00000011233447999999765 3567889999999999999999988753211
Q ss_pred h----c-----------cCCCCcchHHHHHHHhccCCCCCCC---hHHHHhcc
Q 004025 247 R----N-----------TASIPKSLLPDYQRLLSSMPSRRLN---SSKLIENS 281 (778)
Q Consensus 247 ~----~-----------~~~iP~~L~~~i~~lL~~dP~~Rps---~~~lL~~~ 281 (778)
. . ...+|..+.+++++||+.+|.+||+ +.++++|+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~ 274 (305)
T cd05609 222 EELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHR 274 (305)
T ss_pred HHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCc
Confidence 1 0 1145777899999999999999998 68889997
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=267.71 Aligned_cols=243 Identities=14% Similarity=0.154 Sum_probs=186.5
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCC-----CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeE
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDD-----GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTE 89 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~-----g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e 89 (778)
+...+|++.+.+|.|+ | .||.|..+.. +..|+||.+.... .......+.+|+.+|+.++||||++++++++
T Consensus 3 ~~~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~ 79 (277)
T cd05032 3 LPREKITLIRELGQGSFG--MVYEGLAKGVVKGEPETRVAIKTVNENA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVS 79 (277)
T ss_pred cchHHeeEEeEecCCCCc--eEEEEEEeccCCCCcceeEEEEecCCcc-CHHHHHHHHHHHHHHHhCCCCceeEEEEEEc
Confidence 3456899999999998 8 8999988644 3789999986543 2233456789999999999999999999987
Q ss_pred ecccccCCcccEEEEEecCC--cChHHHHHHhCcCC-------CcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCe
Q 004025 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLEG-------SQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSV 160 (778)
Q Consensus 90 ~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~-------~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI 160 (778)
.. ...|+||||+ ++|.+++....... ......+..++.||+.||.|||+ .+++||||+|+||
T Consensus 80 ~~--------~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~di~p~ni 150 (277)
T cd05032 80 TG--------QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA-KKFVHRDLAARNC 150 (277)
T ss_pred CC--------CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCccccccChheE
Confidence 64 3799999999 58999987643211 11233455568999999999995 9999999999999
Q ss_pred EEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCC
Q 004025 161 VVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMR 239 (778)
Q Consensus 161 ~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~ 239 (778)
+++.+|.+||+|||+++.+........ ......+..|+|||.+.+ ..++.++|+|||||++||+++ |..
T Consensus 151 ll~~~~~~kl~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el~t~g~~ 220 (277)
T cd05032 151 MVAEDLTVKIGDFGMTRDIYETDYYRK----GGKGLLPVRWMAPESLKD------GVFTTKSDVWSFGVVLWEMATLAEQ 220 (277)
T ss_pred EEcCCCCEEECCcccchhhccCccccc----CCCCCccccccCHHHHhc------CCCCcccchHHHHHHHHHhhccCCC
Confidence 999999999999999887654221100 011123457999999865 356778999999999999998 777
Q ss_pred CCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 240 LSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 240 p~~~~~l~-------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
+|...... ....+|..+.+++.+||+.+|.+||++.++++.
T Consensus 221 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~ 274 (277)
T cd05032 221 PYQGLSNEEVLKFVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSS 274 (277)
T ss_pred CCccCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 77432111 113456778899999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=269.13 Aligned_cols=237 Identities=21% Similarity=0.291 Sum_probs=189.2
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~ 99 (778)
|++.+.++.|. | .||+|+++.+|+.++||.+............+.+|+..|+.++||||+++++.+...
T Consensus 1 y~~~~~i~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-------- 70 (283)
T cd05118 1 YQKLGKIGEGTYG--VVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHK-------- 70 (283)
T ss_pred CccceeeecCCCc--eEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccC--------
Confidence 67788899887 7 899999999999999999987654444566788999999999999999999998863
Q ss_pred cEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccc
Q 004025 100 ITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (778)
Q Consensus 100 ~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~ 178 (778)
..+|+|+||+ ++|..++..... ......+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+|||++..
T Consensus 71 ~~~~~v~e~~~~~l~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dl~p~nili~~~~~~~l~df~~~~~ 147 (283)
T cd05118 71 GDLYLVFEFMDTDLYKLIKDRQR--GLPESLIKSYLYQLLQGLAFCHS-HGILHRDLKPENLLINTEGVLKLADFGLARS 147 (283)
T ss_pred CCEEEEEeccCCCHHHHHHhhcc--cCCHHHHHHHHHHHHHHHHHHHH-CCeeecCcCHHHEEECCCCcEEEeeeeeeEe
Confidence 4899999999 578777766431 22334456679999999999995 8999999999999999999999999999887
Q ss_pred cCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh------------
Q 004025 179 FDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------------ 246 (778)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l------------ 246 (778)
...... . .........|++||.+.+. ..++.++|+|||||++|+|++|+.+|.....
T Consensus 148 ~~~~~~----~--~~~~~~~~~~~~PE~~~~~-----~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~ 216 (283)
T cd05118 148 FGSPVR----P--YTHYVVTRWYRAPELLLGD-----KGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLG 216 (283)
T ss_pred cCCCcc----c--ccCccCcccccCcHHHhcC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcC
Confidence 755320 0 0112234479999998652 3567899999999999999999987743110
Q ss_pred -------hc-----------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 -------RN-----------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 -------~~-----------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. ...++..+.+++.+||..+|.+||++.+++.|+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~ 281 (283)
T cd05118 217 TPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHP 281 (283)
T ss_pred CCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCC
Confidence 00 012556788899999999999999999999998
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-29 Score=265.46 Aligned_cols=236 Identities=16% Similarity=0.179 Sum_probs=183.9
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|++.+++|.|+ | .||.|... ++..|+||.+.... ...+.+.+|+.++++++||||+++++.+...
T Consensus 4 ~~~~~~~~~~lg~g~~g--~v~~~~~~-~~~~v~iK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---- 73 (261)
T cd05072 4 PRESIKLVKKLGAGQFG--EVWMGYYN-NSTKVAVKTLKPGT---MSVQAFLEEANLMKTLQHDKLVRLYAVVTKE---- 73 (261)
T ss_pred chHHeEEeeecCCcCCc--eEEEEEec-CCceEEEEEccCCc---hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCC----
Confidence 345799999999998 7 89999865 56789999876432 2346788999999999999999999988753
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
...|+++||+ ++|.+++....... .....+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+||
T Consensus 74 ----~~~~lv~e~~~~~~L~~~l~~~~~~~-~~~~~~~~~~~~l~~~l~~LH~-~~i~H~dl~p~nili~~~~~~~l~df 147 (261)
T cd05072 74 ----EPIYIITEYMAKGSLLDFLKSDEGGK-VLLPKLIDFSAQIAEGMAYIER-KNYIHRDLRAANVLVSESLMCKIADF 147 (261)
T ss_pred ----CCcEEEEecCCCCcHHHHHHHhcCCC-CCHHHHHHHHHHHHHHHHHHHH-CCeeccccchhhEEecCCCcEEECCC
Confidence 3789999999 57999887643222 2233455568999999999995 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL------ 246 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l------ 246 (778)
|++.......... ......+..|+|||++.+. .++.++|+|||||++|+|++ |..||.....
T Consensus 148 g~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~ 216 (261)
T cd05072 148 GLARVIEDNEYTA-----REGAKFPIKWTAPEAINFG------SFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSA 216 (261)
T ss_pred ccceecCCCceec-----cCCCccceecCCHHHhccC------CCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHH
Confidence 9998765421100 1111233479999998753 45678999999999999998 8877743211
Q ss_pred -h------ccCCCCcchHHHHHHHhccCCCCCCChHHHHh
Q 004025 247 -R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 247 -~------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
. ....+|..+.+++.+|++.+|..||+++++++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 217 LQRGYRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred HHcCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 1 11346778999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-29 Score=271.47 Aligned_cols=236 Identities=15% Similarity=0.184 Sum_probs=182.2
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCC--cEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEeccccc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGS--PVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~--~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~g 95 (778)
+|++.+.||.|+ | .||+|+.+.++. .++||.+... ......+.+.+|+.+++++ +||||+++++.++..
T Consensus 3 ~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~---- 75 (297)
T cd05089 3 DIKFEDVIGEGNFG--QVIRAMIKKDGLKMNAAIKMLKEF-ASENDHRDFAGELEVLCKLGHHPNIINLLGACENR---- 75 (297)
T ss_pred cceeeeeecCCCcc--eEEEEEecCCCCcceeEEEEcccc-CCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccC----
Confidence 699999999998 8 899999988775 4688877632 2223456688999999999 799999999998763
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcC-------------CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCe
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLE-------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSV 160 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~-------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI 160 (778)
..+|+|+||+ ++|.+++...... .......+..++.||+.||.|||+ .+++||||||+||
T Consensus 76 ----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~-~~ivH~dlkp~Ni 150 (297)
T cd05089 76 ----GYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE-KQFIHRDLAARNV 150 (297)
T ss_pred ----CcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCcCCcceE
Confidence 3799999998 5799998764311 112234456679999999999995 9999999999999
Q ss_pred EEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCC
Q 004025 161 VVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMR 239 (778)
Q Consensus 161 ~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~ 239 (778)
+++.++.+||+|||++...... ........+..|++||++.+ ..++.++|+|||||++|||++ |..
T Consensus 151 ll~~~~~~kl~dfg~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwSlG~il~el~t~g~~ 217 (297)
T cd05089 151 LVGENLASKIADFGLSRGEEVY-------VKKTMGRLPVRWMAIESLNY------SVYTTKSDVWSFGVLLWEIVSLGGT 217 (297)
T ss_pred EECCCCeEEECCcCCCccccce-------eccCCCCcCccccCchhhcc------CCCCchhhHHHHHHHHHHHHcCCCC
Confidence 9999999999999998643221 00111122347999999865 356789999999999999997 888
Q ss_pred CCChhhhhc-------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 240 LSKTEELRN-------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 240 p~~~~~l~~-------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
||....... ...++..+.+++.+||..+|.+||+++++++.
T Consensus 218 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 218 PYCGMTCAELYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred CCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 874322110 12466778899999999999999999999765
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-29 Score=267.35 Aligned_cols=230 Identities=16% Similarity=0.197 Sum_probs=181.4
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEEE
Q 004025 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104 (778)
Q Consensus 27 lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~lyI 104 (778)
||.|+ | +||.+.++.+|+.|+||++.++.... .....+.+|+++|+.++||||+++++.++.. ..+|+
T Consensus 1 lg~g~~g--~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--------~~~~l 70 (277)
T cd05577 1 LGKGGFG--EVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETK--------DDLCL 70 (277)
T ss_pred CCCCCce--eEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecC--------CeEEE
Confidence 45666 7 89999999999999999998643221 2345667899999999999999999999864 38999
Q ss_pred EecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCCC
Q 004025 105 VTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGN 182 (778)
Q Consensus 105 VtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~ 182 (778)
||||+ ++|.+++...... ......+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+|||++......
T Consensus 71 v~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~ql~~~l~~lH~-~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~ 148 (277)
T cd05577 71 VMTLMNGGDLKYHIYNVGEP-GFPEARAIFYAAQIICGLEHLHQ-RRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG 148 (277)
T ss_pred EEecCCCCcHHHHHHHcCcC-CCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEECCCCCEEEccCcchhhhccC
Confidence 99999 5799888765421 12344456668999999999995 99999999999999999999999999998765431
Q ss_pred CCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-------hc-------
Q 004025 183 NEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------RN------- 248 (778)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l-------~~------- 248 (778)
.. .........|++||.+.+. .++.++|+|||||++|+|++|..||..... ..
T Consensus 149 ~~-------~~~~~~~~~y~~PE~~~~~------~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 215 (277)
T cd05577 149 KK-------IKGRAGTPGYMAPEVLQGE------VYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAV 215 (277)
T ss_pred Cc-------cccccCCCCcCCHHHhcCC------CCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccc
Confidence 11 1112234589999998763 467789999999999999999988753211 10
Q ss_pred --cCCCCcchHHHHHHHhccCCCCCC-----ChHHHHhcc
Q 004025 249 --TASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENS 281 (778)
Q Consensus 249 --~~~iP~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~ 281 (778)
...++..+.+++.+||..+|.+|| ++.++++|+
T Consensus 216 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~ 255 (277)
T cd05577 216 EYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHP 255 (277)
T ss_pred cCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhCh
Confidence 124567789999999999999999 888899998
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-29 Score=267.76 Aligned_cols=242 Identities=14% Similarity=0.161 Sum_probs=185.7
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECC-----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEec
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKD-----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~-----~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e 91 (778)
...|.+.+.+|.|+ | .||+|..+. .+..|++|.+..... ......+.+|+.+++.++||||+++++++...
T Consensus 5 ~~~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (277)
T cd05036 5 RDSITLLRALGHGAFG--EVYEGLYRGRDGDAVELQVAVKTLPESCS-EQDESDFLMEALIMSKFNHQNIVRLIGVSFER 81 (277)
T ss_pred HHHcEeeeECCCCCCC--cEEEEEEecCCCCCCceeEEEEEcCCCCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC
Confidence 35699999999998 8 899999987 678899998864322 22345678899999999999999999988763
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcCC----CcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEG----SQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT 165 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~----~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~ 165 (778)
...|+||||+ ++|.+++....... ......+..++.||+.||.|||+ .+++||||+|+||+++.+
T Consensus 82 --------~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~-~~ivH~dlkp~nil~~~~ 152 (277)
T cd05036 82 --------LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEE-NHFIHRDIAARNCLLTCK 152 (277)
T ss_pred --------CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCEeecccchheEEEecc
Confidence 3679999999 57999987754211 12233455679999999999995 899999999999999876
Q ss_pred C---cEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCC
Q 004025 166 L---DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLS 241 (778)
Q Consensus 166 g---~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~ 241 (778)
| .+||+|||+++.+....... .......+..|+|||++.+ ..++.++|+|||||++|||++ |..||
T Consensus 153 ~~~~~~kl~dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~~g~~pf 222 (277)
T cd05036 153 GPGRVAKIADFGMARDIYRASYYR----KGGRAMLPIKWMPPEAFLD------GIFTSKTDVWSFGVLLWEIFSLGYMPY 222 (277)
T ss_pred CCCcceEeccCccccccCCcccee----cCCCCCccHhhCCHHHHhc------CCcCchhHHHHHHHHHHHHHcCCCCCC
Confidence 5 59999999998764321100 0001122347999999875 357789999999999999997 77777
Q ss_pred Chhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 242 KTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 242 ~~~~l~-------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...... ....+|..+.+++.+||..+|..||++.+++++-
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l 275 (277)
T cd05036 223 PGRTNQEVMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERI 275 (277)
T ss_pred CCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHh
Confidence 532111 1134677889999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-29 Score=277.71 Aligned_cols=240 Identities=15% Similarity=0.233 Sum_probs=189.6
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.||.|. | +||.|.++.+|..|+||.+......+.....+.+|+.+|+.++||||++++++++.+...+
T Consensus 15 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~-- 90 (343)
T cd07880 15 DRYRDLKQVGSGAYG--TVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLD-- 90 (343)
T ss_pred cceEEEEEeeecCCe--EEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccc--
Confidence 4699999999998 8 8999999999999999999765444444567889999999999999999999997643110
Q ss_pred cccEEEEEecCCc-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
....+|+||||++ +|..++.... .....+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++
T Consensus 91 ~~~~~~lv~e~~~~~l~~~~~~~~----l~~~~~~~i~~qi~~al~~LH~-~gi~H~dlkp~Nill~~~~~~kl~dfg~~ 165 (343)
T cd07880 91 RFHDFYLVMPFMGTDLGKLMKHEK----LSEDRIQFLVYQMLKGLKYIHA-AGIIHRDLKPGNLAVNEDCELKILDFGLA 165 (343)
T ss_pred ccceEEEEEecCCCCHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCCCEEEeecccc
Confidence 0135799999994 6777776433 2345567779999999999995 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----hc----
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN---- 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~~---- 248 (778)
....... ....+...|++||++.+. ..++.++|+|||||++|++++|..||..... ..
T Consensus 166 ~~~~~~~---------~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~ 231 (343)
T cd07880 166 RQTDSEM---------TGYVVTRWYRAPEVILNW-----MHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKV 231 (343)
T ss_pred cccccCc---------cccccCCcccCHHHHhCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 7654321 111334589999998652 2456789999999999999999988753210 00
Q ss_pred -----------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -----------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -----------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++.+||..||.+||++.+++.|+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~ 299 (343)
T cd07880 232 TGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHP 299 (343)
T ss_pred cCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence 013455678889999999999999999999998
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-29 Score=267.64 Aligned_cols=241 Identities=14% Similarity=0.173 Sum_probs=182.2
Q ss_pred CCCceeccCCCCCC-CceEEEEeEEC-----CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEec
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSK-----DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k-----~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e 91 (778)
..+|++.+.+|.|+ | +||.|..+ .++..|+||++..... ......+.+|+.+++.++||||+++++.+...
T Consensus 5 ~~~~~~~~~ig~G~~g--~v~~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~ 81 (277)
T cd05062 5 REKITMSRELGQGSFG--MVYEGIAKGVVKDEPETRVAIKTVNEAAS-MRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 81 (277)
T ss_pred HHHceeeeeeccccCC--eEEEEEeccCCCCCceeEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 35699999999998 8 89998864 2356799999864322 23345678999999999999999999998753
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcC-------CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEE
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV 162 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~-------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v 162 (778)
...|+||||+ ++|.+++...... .......+..++.|++.||.|||+ .+++||||||+||++
T Consensus 82 --------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~-~~~vH~dlkp~Nil~ 152 (277)
T cd05062 82 --------QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNA-NKFVHRDLAARNCMV 152 (277)
T ss_pred --------CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCcchheEEE
Confidence 3789999999 5799998764321 011123345568999999999995 899999999999999
Q ss_pred cCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCC
Q 004025 163 TQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLS 241 (778)
Q Consensus 163 ~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~ 241 (778)
+.++.+||+|||++........... ......+..|+|||++.+ ..++.++|+|||||++|||++ |..||
T Consensus 153 ~~~~~~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~~~~~~p~ 222 (277)
T cd05062 153 AEDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVRWMSPESLKD------GVFTTYSDVWSFGVVLWEIATLAEQPY 222 (277)
T ss_pred cCCCCEEECCCCCccccCCcceeec----CCCCccCHhhcChhHhhc------CCcCchhHHHHHHHHHHHHHcCCCCCC
Confidence 9999999999999876543211000 001122347999999875 356788999999999999998 56666
Q ss_pred Chhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 242 KTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 242 ~~~~l~-------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
...... ....+|..+.+++.+||+.+|..||++.++++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 223 QGMSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred CCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 432111 113456678899999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-29 Score=263.68 Aligned_cols=232 Identities=18% Similarity=0.231 Sum_probs=183.1
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
....|++.+.+|.|+ | .||+|..+ |..|++|.+... ...+.+.+|+.++++++||||+++++.+..+
T Consensus 4 ~~~~~~~~~~lg~g~~~--~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---- 71 (256)
T cd05082 4 NMKELKLLQTIGKGEFG--DVMLGDYR--GNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEE---- 71 (256)
T ss_pred cHHhCeeeeeecccCCC--eEEEEEEc--CCcEEEEEeCCC----chHHHHHHHHHHHHhCCCCCeeeEEEEEEcC----
Confidence 345799999999998 8 89999875 889999998643 2245688999999999999999999876533
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
...+|+|+||+ ++|.+++....... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+||
T Consensus 72 ---~~~~~lv~e~~~~~~L~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~nil~~~~~~~kl~df 146 (256)
T cd05082 72 ---KGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEA-NNFVHRDLAARNVLVSEDNVAKVSDF 146 (256)
T ss_pred ---CCceEEEEECCCCCcHHHHHHhcCCCC-CCHHHHHHHHHHHHHHHHHHHh-CCEeccccchheEEEcCCCcEEecCC
Confidence 23789999999 58999987654321 2234456668999999999995 99999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhhc----
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELRN---- 248 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~~---- 248 (778)
|++........ ....+..|+|||+..+ ..++.++|+|||||++|+|++ |..|+.......
T Consensus 147 g~~~~~~~~~~---------~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~ 211 (256)
T cd05082 147 GLTKEASSTQD---------TGKLPVKWTAPEALRE------KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR 211 (256)
T ss_pred ccceeccccCC---------CCccceeecCHHHHcc------CCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 99876543211 1112347999999876 356778999999999999997 877775432211
Q ss_pred ---------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 249 ---------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 249 ---------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
...+|..+.+++.+|++.+|.+||++.++++.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~ 252 (256)
T cd05082 212 VEKGYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQ 252 (256)
T ss_pred HhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 13467789999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-29 Score=263.07 Aligned_cols=231 Identities=15% Similarity=0.149 Sum_probs=179.1
Q ss_pred cCCCCCC-CceEEEEeEECCCC---CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCccc
Q 004025 25 DPYPSAW-GSWSHFQGTSKDDG---SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKI 100 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~g---~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~ 100 (778)
++||.|+ | .||+|+....+ ..|+||.+...... ...+.+.+|+++++++.||||++++++++. .
T Consensus 1 ~~ig~G~~g--~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---------~ 68 (257)
T cd05060 1 KELGHGNFG--SVVKGVYLMKSGKEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLDHPCIVRLIGVCKG---------E 68 (257)
T ss_pred CccCccCce--eEEEeEeeccCCCcceEEEEecccccch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEcC---------C
Confidence 4678887 7 89999876555 78999999865433 345678899999999999999999998763 2
Q ss_pred EEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccc
Q 004025 101 TIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (778)
Q Consensus 101 ~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~ 178 (778)
..|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+++.
T Consensus 69 ~~~~v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lh~-~~i~H~di~p~nili~~~~~~kl~df~~~~~ 144 (257)
T cd05060 69 PLMLVMELAPLGPLLKYLKKRRE---IPVSDLKELAHQVAMGMAYLES-KHFVHRDLAARNVLLVNRHQAKISDFGMSRA 144 (257)
T ss_pred ceEEEEEeCCCCcHHHHHHhCCC---CCHHHHHHHHHHHHHHHHHHhh-cCeeccCcccceEEEcCCCcEEeccccccce
Confidence 689999998 579999987552 2344566679999999999995 8999999999999999999999999999887
Q ss_pred cCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh-----------
Q 004025 179 FDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL----------- 246 (778)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l----------- 246 (778)
.......... ......+..|+|||.+.+ ..++.++|+|||||++|+|++ |.+||.....
T Consensus 145 ~~~~~~~~~~---~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~ 215 (257)
T cd05060 145 LGAGSDYYRA---TTAGRWPLKWYAPECINY------GKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGE 215 (257)
T ss_pred eecCCccccc---ccCccccccccCHHHhcC------CCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC
Confidence 6542211000 001112247999999876 356779999999999999997 8888753211
Q ss_pred --hccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 247 --RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 247 --~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
.....+|..+.+++.+||..+|.+||++.++++.
T Consensus 216 ~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~ 251 (257)
T cd05060 216 RLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELEST 251 (257)
T ss_pred cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 1123456778899999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-29 Score=268.82 Aligned_cols=241 Identities=16% Similarity=0.200 Sum_probs=185.9
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEEC-----CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeE
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSK-----DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTE 89 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k-----~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e 89 (778)
+...+|.+.+.+|.|+ | +||.+..+ .++..|+||.+.... ......+.+|+..+++++||||+++++.+.
T Consensus 2 ~~~~~~~~~~~lg~G~~~--~v~~~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 77 (288)
T cd05093 2 IKRHNIVLKRELGEGAFG--KVFLAECYNLCPEQDKILVAVKTLKDAS--DNARKDFHREAELLTNLQHEHIVKFYGVCV 77 (288)
T ss_pred CchHHeeeccccCCcCCe--eEEeeEeccCCCCCcceEEEEEecCCcC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEe
Confidence 3456899999999998 8 89999853 345679999887542 334567889999999999999999999987
Q ss_pred ecccccCCcccEEEEEecCC--cChHHHHHHhCcC----------CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCC
Q 004025 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLE----------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCL 157 (778)
Q Consensus 90 ~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~----------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp 157 (778)
.. ..+|+|+||+ ++|.+++...+.. .......+..++.||+.||.|||+ .+++||||||
T Consensus 78 ~~--------~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~-~~i~H~dlkp 148 (288)
T cd05093 78 EG--------DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS-QHFVHRDLAT 148 (288)
T ss_pred cC--------CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccCc
Confidence 63 3899999999 5799998765421 112344566779999999999995 8999999999
Q ss_pred CCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-
Q 004025 158 SSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS- 236 (778)
Q Consensus 158 ~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t- 236 (778)
+||+++.+|.+||+|||++......... ........+..|+|||++.+ ..++.++|+|||||++|+|++
T Consensus 149 ~Nili~~~~~~kl~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~------~~~~~~sDiwslG~il~~l~t~ 218 (288)
T cd05093 149 RNCLVGENLLVKIGDFGMSRDVYSTDYY----RVGGHTMLPIRWMPPESIMY------RKFTTESDVWSLGVVLWEIFTY 218 (288)
T ss_pred ceEEEccCCcEEeccCCccccccCCcee----ecCCCCCccccccCHHHhcc------CCCCchhhHHHHHHHHHHHHhC
Confidence 9999999999999999998766432110 00011122347999999876 356779999999999999998
Q ss_pred CCCCCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHh
Q 004025 237 GMRLSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 237 g~~p~~~~~l~-------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
|.+||...... ....+|..+.+++.+||+.||.+||++.+++.
T Consensus 219 g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 219 GKQPWYQLSNNEVIECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred CCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 77776432110 11346778999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-29 Score=264.63 Aligned_cols=232 Identities=14% Similarity=0.159 Sum_probs=179.7
Q ss_pred CCCCCC-CceEEEEeEE--CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEE
Q 004025 26 PYPSAW-GSWSHFQGTS--KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~--k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~l 102 (778)
++|.|+ | +||+|.. +.++..|+||++..........+.+.+|+.+++.++||||+++++.++.+ ..
T Consensus 2 ~lg~G~~g--~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---------~~ 70 (257)
T cd05116 2 ELGSGNFG--TVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAE---------SW 70 (257)
T ss_pred cCCCcCCc--ceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCC---------Cc
Confidence 578887 7 8999964 46688999999876544445567789999999999999999999987532 57
Q ss_pred EEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccC
Q 004025 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (778)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~ 180 (778)
|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||.||+++.++.+||+|||++....
T Consensus 71 ~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~al~~lH~-~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~ 146 (257)
T cd05116 71 MLVMELAELGPLNKFLQKNKH---VTEKNITELVHQVSMGMKYLEE-TNFVHRDLAARNVLLVTQHYAKISDFGLSKALG 146 (257)
T ss_pred EEEEecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCEeecccchhhEEEcCCCeEEECCCccccccC
Confidence 9999998 579988876432 2234456669999999999995 899999999999999999999999999988765
Q ss_pred CCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh-------h-----
Q 004025 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL-------R----- 247 (778)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l-------~----- 247 (778)
....... .......+..|+|||.+.. ..++.++|+|||||++|||++ |..||..... .
T Consensus 147 ~~~~~~~---~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~ 217 (257)
T cd05116 147 ADENYYK---AKTHGKWPVKWYAPECMNY------YKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERM 217 (257)
T ss_pred CCCCeee---ecCCCCCCccccCHhHhcc------CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCC
Confidence 4321100 0111122358999998765 356678999999999999997 8888753211 1
Q ss_pred -ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|..+.+++.+|++.||..||+++++.+.-
T Consensus 218 ~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l 252 (257)
T cd05116 218 ECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRL 252 (257)
T ss_pred CCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHH
Confidence 1134677889999999999999999999887653
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.3e-30 Score=280.72 Aligned_cols=248 Identities=17% Similarity=0.289 Sum_probs=194.1
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
..+|++.+.||.|. | +||.|+++.+++.|+||++............+.+|+.+++.++||||+++++.+..+...
T Consensus 14 ~~~y~~~~~ig~g~~g--~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-- 89 (343)
T cd07851 14 PDRYQNLSPVGSGAYG--QVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSL-- 89 (343)
T ss_pred cCceEEEEEeccCCce--EEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccc--
Confidence 34799999999987 7 999999999999999999876433334456678899999999999999999988654310
Q ss_pred CcccEEEEEecCCc-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 97 STKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 97 ~~~~~lyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
.....+|+|+||++ +|.+++.... .....+.+++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||+
T Consensus 90 ~~~~~~~lv~e~~~~~L~~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~-~gi~H~dlkp~Nill~~~~~~kL~dfg~ 164 (343)
T cd07851 90 EDFQDVYLVTHLMGADLNNIVKCQK----LSDDHIQFLVYQILRGLKYIHS-AGIIHRDLKPSNIAVNEDCELKILDFGL 164 (343)
T ss_pred cccccEEEEEecCCCCHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECCCCCEEEccccc
Confidence 01235899999994 6888877533 2344567779999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----hc---
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN--- 248 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~~--- 248 (778)
+....... ....++..|+|||.+.+. ..++.++|+|||||++|++++|..||..... ..
T Consensus 165 ~~~~~~~~---------~~~~~~~~y~aPE~~~~~-----~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~ 230 (343)
T cd07851 165 ARHTDDEM---------TGYVATRWYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMN 230 (343)
T ss_pred cccccccc---------cCCcccccccCHHHHhCC-----CCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence 88764321 112334579999997652 2466789999999999999999988742210 00
Q ss_pred ------------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcccCCcccccccc
Q 004025 249 ------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQ 292 (778)
Q Consensus 249 ------------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff~ 292 (778)
...++..+.+++.+||+.+|.+||++.++++|+ |+..+..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~----~~~~~~~ 306 (343)
T cd07851 231 LVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHP----YLAEYHD 306 (343)
T ss_pred hcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCC----CccccCC
Confidence 013466788899999999999999999999998 6655543
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-29 Score=270.57 Aligned_cols=244 Identities=17% Similarity=0.236 Sum_probs=186.2
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCC-----CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeee
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDD-----GSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHST 88 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~-----g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~ 88 (778)
+...+|++.+.+|.|+ | .||+|..+.. ...|++|.+..... ......+.+|+.+++.+ +||||+++++.+
T Consensus 9 ~~~~~~~~~~~ig~g~~g--~v~~~~~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 85 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFG--QVVKAEAVGLDNPNETSTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGVC 85 (293)
T ss_pred cCHhHeEEeeEecccccc--cEEEEEEecCCCCCCceeEEEEEccCCCC-HHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 3456799999999998 7 8999987643 37899999875433 33455688999999999 799999999998
Q ss_pred EecccccCCcccEEEEEecCC--cChHHHHHHhCc-------------CCCcchHHHHHHHHHHHHHHHHHHcCCCcccc
Q 004025 89 EVENIDATSTKITIYIVTEPV--MPLSEKIKELGL-------------EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHG 153 (778)
Q Consensus 89 e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~-------------~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~ 153 (778)
..+ ..+|++|||+ ++|..++..... ........+..++.||+.||.|||+ .+++||
T Consensus 86 ~~~--------~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~-~~ivH~ 156 (293)
T cd05053 86 TQE--------GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS-KKCIHR 156 (293)
T ss_pred cCC--------CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH-CCcccc
Confidence 763 3799999999 579999876421 1112233455669999999999995 899999
Q ss_pred ccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHH
Q 004025 154 NVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYE 233 (778)
Q Consensus 154 dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liye 233 (778)
||||+||+++.+|.+||+|||+++.+....... .......+..|+|||++.+ ..++.++|+|||||++||
T Consensus 157 dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~e 226 (293)
T cd05053 157 DLAARNVLVTEDHVMKIADFGLARDIHHIDYYR----KTTNGRLPVKWMAPEALFD------RVYTHQSDVWSFGVLLWE 226 (293)
T ss_pred ccceeeEEEcCCCeEEeCcccccccccccccee----ccCCCCCCccccCHHHhcc------CCcCcccceeehhhHHHH
Confidence 999999999999999999999998765421100 0011112347999998765 356788999999999999
Q ss_pred HHh-CCCCCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 234 LFS-GMRLSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 234 l~t-g~~p~~~~~l~-------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+++ |..++...... ....++..+.+++.+|+..+|..||++.++++..
T Consensus 227 l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l 288 (293)
T cd05053 227 IFTLGGSPYPGIPVEELFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDL 288 (293)
T ss_pred HhcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHH
Confidence 997 77776432110 1134566788999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-29 Score=264.87 Aligned_cols=235 Identities=14% Similarity=0.142 Sum_probs=182.2
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
..+|++.+.+|.|+ | +||.|+.+ ++..|+||.+...... .+.+.+|+..+++++||||+++++++...
T Consensus 3 ~~~~~~~~~lg~G~~~--~vy~~~~~-~~~~~aik~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 71 (256)
T cd05113 3 PKDLTFLKELGTGQFG--VVKYGKWR-GQYDVAIKMIKEGSMS---EDEFIEEAKVMMKLSHEKLVQLYGVCTKQ----- 71 (256)
T ss_pred hHHeEEeeEecCcccc--eEEEEEec-CCCcEEEEEcCCCccc---HHHHHHHHHHHhcCCCCCeeeEEEEEccC-----
Confidence 34699999999998 8 89999876 3557999998754322 34578999999999999999999998753
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+|||
T Consensus 72 ---~~~~lv~e~~~~~~l~~~i~~~~~--~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~nili~~~~~~kl~d~g 145 (256)
T cd05113 72 ---RPIYIVTEYMSNGCLLNYLREHGK--RFQPSQLLEMCKDVCEGMAYLES-KQFIHRDLAARNCLVDDQGCVKVSDFG 145 (256)
T ss_pred ---CCcEEEEEcCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHh-CCeeccccCcceEEEcCCCCEEECCCc
Confidence 3789999999 479988876432 22344567779999999999995 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhh-------h
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE-------L 246 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~-------l 246 (778)
++......... .......+..|++||+..+. .++.++|+|||||++|+|++ |..||.... .
T Consensus 146 ~~~~~~~~~~~-----~~~~~~~~~~y~~pe~~~~~------~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~ 214 (256)
T cd05113 146 LSRYVLDDEYT-----SSVGSKFPVRWSPPEVLLYS------KFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKV 214 (256)
T ss_pred cceecCCCcee-----ecCCCccChhhCCHHHHhcC------cccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHH
Confidence 98766432110 01111223479999998753 46678999999999999998 877764211 1
Q ss_pred hc------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 247 RN------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 247 ~~------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
.+ ....+..+.+++.+||+.+|.+||++.+++.+
T Consensus 215 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 215 SQGLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred hcCCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 11 12345678899999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-29 Score=268.88 Aligned_cols=239 Identities=17% Similarity=0.218 Sum_probs=182.9
Q ss_pred CceeccCCCCCC-CceEEEEeEECC-----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKD-----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~-----~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
+|.+.+++|.|+ | +||+|+... ++..|+||++.... .....+.+.+|+.+++.++||||+++++.++..
T Consensus 6 ~~~~~~~lg~G~~g--~V~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~-- 80 (283)
T cd05091 6 TVRFMEELGEDRFG--KVYKGHLFGTAPGEQTQAVAIKTLKDKA-EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKE-- 80 (283)
T ss_pred HHHHHHHhCCCCCC--eEEEEEEecCCCCCceeEEEEEEccCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC--
Confidence 588999999998 8 899998754 35789999997543 223456788999999999999999999998764
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCc-------------CCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCC
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGL-------------EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLS 158 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~-------------~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~ 158 (778)
..+++++||+ ++|..++..... ........+..++.|++.||.|||+ .+++||||||+
T Consensus 81 ------~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~-~gi~H~dlkp~ 153 (283)
T cd05091 81 ------QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSS-HHVVHKDLATR 153 (283)
T ss_pred ------CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH-cCccccccchh
Confidence 3789999999 568888854221 0112233456679999999999995 89999999999
Q ss_pred CeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-C
Q 004025 159 SVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-G 237 (778)
Q Consensus 159 NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g 237 (778)
||+++.++.+||+|||+++......... .......+..|+|||.+.++ .++.++|+|||||++|||++ |
T Consensus 154 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~~l~el~~~g 223 (283)
T cd05091 154 NVLVFDKLNVKISDLGLFREVYAADYYK----LMGNSLLPIRWMSPEAIMYG------KFSIDSDIWSYGVVLWEVFSYG 223 (283)
T ss_pred heEecCCCceEecccccccccccchhee----eccCccCCccccCHHHHhcC------CCCcchhHHHHHHHHHHHHcCC
Confidence 9999999999999999988764321100 00111234579999998653 46778999999999999998 6
Q ss_pred CCCCChhhh----h---c------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 238 MRLSKTEEL----R---N------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 238 ~~p~~~~~l----~---~------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
..++..... . . ...+|..+.+++.+|++.+|.+||++.+++..
T Consensus 224 ~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~ 279 (283)
T cd05091 224 LQPYCGYSNQDVIEMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR 279 (283)
T ss_pred CCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence 666643211 1 1 13467778999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-29 Score=299.78 Aligned_cols=243 Identities=13% Similarity=0.089 Sum_probs=186.9
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
.+|++.+.||.|+ | +||+|+++.+|+.|+||++...... +...+.+.+|+++++.++||||+++++.+++.
T Consensus 2 grYeIi~~LGkGgfG--~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~----- 74 (932)
T PRK13184 2 QRYDIIRLIGKGGMG--EVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDG----- 74 (932)
T ss_pred CCeEEEEEEecCCCE--EEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeC-----
Confidence 3699999999998 8 9999999999999999999754322 23456788999999999999999999999863
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcC--------CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLE--------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL 166 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~--------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g 166 (778)
...|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++||||||+||+++.+|
T Consensus 75 ---~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs-~GIIHRDLKPeNILLd~dg 150 (932)
T PRK13184 75 ---DPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHS-KGVLHRDLKPDNILLGLFG 150 (932)
T ss_pred ---CEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHH-CCccccCCchheEEEcCCC
Confidence 3899999999 5799888753211 011122345568999999999996 8999999999999999999
Q ss_pred cEEEEecccccccCCCCCCCC-----------CCccc-cccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHH
Q 004025 167 DWKLHAFDVLSEFDGNNEAAN-----------GPMLQ-YAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYEL 234 (778)
Q Consensus 167 ~~KL~dFgla~~~~~~~~~~~-----------~~~~~-~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel 234 (778)
.+||+|||++........... ..+.. ....++..|+|||++.+ ..++.++|+|||||++|||
T Consensus 151 ~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g------~~~S~kSDIWSLGVILyEL 224 (932)
T PRK13184 151 EVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLG------VPASESTDIYALGVILYQM 224 (932)
T ss_pred CEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcC------CCCCcHhHHHHHHHHHHHH
Confidence 999999999987632111000 00001 11235568999999876 3567899999999999999
Q ss_pred HhCCCCCChhhhh---------------ccCCCCcchHHHHHHHhccCCCCCCChHHHH
Q 004025 235 FSGMRLSKTEELR---------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLI 278 (778)
Q Consensus 235 ~tg~~p~~~~~l~---------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL 278 (778)
++|..||...... ....+|..+.+++.+||..||.+|++..+.+
T Consensus 225 LTG~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeL 283 (932)
T PRK13184 225 LTLSFPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQEL 283 (932)
T ss_pred HHCCCCCCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 9999988543211 1135778899999999999999998764443
|
|
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-29 Score=272.48 Aligned_cols=245 Identities=16% Similarity=0.174 Sum_probs=182.3
Q ss_pred CceeccCCCCCCCceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcc
Q 004025 20 PYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (778)
Q Consensus 20 ~Y~i~~~lg~g~g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~ 99 (778)
.|.+++.+|.+ | .||.++.+.+++.|+||++............+.+|+++++.++||||+++++++..+
T Consensus 3 ~~~i~~~~~~~-~--~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~-------- 71 (314)
T cd08216 3 LTLIGKCFEDL-M--IVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVD-------- 71 (314)
T ss_pred hhhhhHhhcCC-c--eEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecC--------
Confidence 35566665544 4 466677777999999999987544445677899999999999999999999999864
Q ss_pred cEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 100 ~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
..+|++|||+ +.|.+++....... .....+..+++||+.||.|||+ .+++||||||+||+++.+|.+||+||+.+.
T Consensus 72 ~~~~~~~e~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~l~~~L~~LH~-~~ivH~dlk~~Nili~~~~~~kl~d~~~~~ 149 (314)
T cd08216 72 SELYVVSPLMAYGSCEDLLKTHFPEG-LPELAIAFILKDVLNALDYIHS-KGFIHRSVKASHILLSGDGKVVLSGLRYSV 149 (314)
T ss_pred CeEEEEEeccCCCCHHHHHHHhcccC-CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCcceEEEecCCceEEecCccce
Confidence 3899999999 57888887643221 2345566779999999999995 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCc-cccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-----hcc--
Q 004025 178 EFDGNNEAANGPM-LQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-----RNT-- 249 (778)
Q Consensus 178 ~~~~~~~~~~~~~-~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l-----~~~-- 249 (778)
............. ..........|++||++.+.. ..++.++|+|||||++|||++|..||..... ...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~----~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~ 225 (314)
T cd08216 150 SMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNL----QGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRG 225 (314)
T ss_pred eeccccccccccccccccccccccccCHHHhcCCC----CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Confidence 6643221100000 011112334799999986531 2466789999999999999999988753210 000
Q ss_pred ---------------C------------------------CCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 250 ---------------A------------------------SIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 250 ---------------~------------------------~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. .+...+.+++.+||..||..||++.++++|+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p 296 (314)
T cd08216 226 TVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHS 296 (314)
T ss_pred cCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCc
Confidence 0 0112355688999999999999999999998
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-29 Score=271.88 Aligned_cols=234 Identities=17% Similarity=0.227 Sum_probs=187.8
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..|+....||.|+ | .||.|.++.+++.|+||.+..+.. ...+.+.+|+.+++.++||||+++++.++.+
T Consensus 21 ~~~~~~~~ig~g~~g--~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~------ 90 (297)
T cd06659 21 SLLENYIKIGEGSTG--IVCIAREKHSGRQVAVKMMDLRKQ--QRRELLFNEVVIMRDYQHQNVVEMYKSYLVG------ 90 (297)
T ss_pred hhHHhhhhcCCCCce--eEEEEEEcCCCCEEEEEEEEeccc--chHHHHHHHHHHHHhCCCCchhhhhhheeeC------
Confidence 4577777899888 8 899999999999999999976432 2345688999999999999999999999864
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+|+|+||+ ++|..++..... ....+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||+
T Consensus 91 --~~~~iv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~qi~~~L~~LH~-~~ivH~dl~p~Nill~~~~~~kL~dfg~ 163 (297)
T cd06659 91 --EELWVLMEFLQGGALTDIVSQTRL----NEEQIATVCESVLQALCYLHS-QGVIHRDIKSDSILLTLDGRVKLSDFGF 163 (297)
T ss_pred --CeEEEEEecCCCCCHHHHHhhcCC----CHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHeEEccCCcEEEeechh
Confidence 3899999999 468887765332 244566779999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----h-----
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----L----- 246 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l----- 246 (778)
+..+...... .....+...|+|||++.+ ..++.++|+|||||++|||++|..||.... +
T Consensus 164 ~~~~~~~~~~------~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~ 231 (297)
T cd06659 164 CAQISKDVPK------RKSLVGTPYWMAPEVISR------TPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRD 231 (297)
T ss_pred Hhhccccccc------ccceecCccccCHHHHcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Confidence 8765432110 111234458999999876 356779999999999999999998874221 1
Q ss_pred ------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 ------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....++..+.+++.+||..+|.+||++.++++|+
T Consensus 232 ~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~ 272 (297)
T cd06659 232 SPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDHP 272 (297)
T ss_pred cCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhCh
Confidence 11234667789999999999999999999999997
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-29 Score=264.08 Aligned_cols=239 Identities=16% Similarity=0.174 Sum_probs=185.6
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCC---CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDD---GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~---g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
.+|++.+.+|.|+ | +||+|+.+.+ ...|+||.+.... .......+.+|+..++.++||||+++++.++..
T Consensus 4 ~~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 77 (266)
T cd05033 4 SYVTIEKVIGGGEFG--EVCRGRLKLPGKKEIDVAIKTLKAGS-SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKS--- 77 (266)
T ss_pred HHceeeeEecCCccc--eEEEEEEccCCCCcceEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecC---
Confidence 4699999999998 8 8999998754 4579999987543 233455678899999999999999999998763
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+|+||||+ ++|.+++..... ......+..++.|++.||.|||+ .+++||||+|+||+++.++.+||+|
T Consensus 78 -----~~~~iv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~Lh~-~~i~H~di~p~nili~~~~~~~l~d 149 (266)
T cd05033 78 -----RPVMIITEYMENGSLDKFLRENDG--KFTVGQLVGMLRGIASGMKYLSE-MNYVHRDLAARNILVNSNLVCKVSD 149 (266)
T ss_pred -----CceEEEEEcCCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCcceEEEcCCCCEEECc
Confidence 3789999999 479998876432 12233445568999999999995 9999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhh------
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE------ 245 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~------ 245 (778)
||++........ .........+..|++||.+.+ ..++.++|+|||||++|+|++ |..|+....
T Consensus 150 fg~~~~~~~~~~----~~~~~~~~~~~~y~~Pe~~~~------~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~ 219 (266)
T cd05033 150 FGLSRRLEDSEA----TYTTKGGKIPIRWTAPEAIAY------RKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIK 219 (266)
T ss_pred cchhhccccccc----ceeccCCCCCccccChhhhcc------CCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHH
Confidence 999988752211 111111223347999999876 356778999999999999997 877763211
Q ss_pred -h------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 246 -L------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 246 -l------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ......|..+.+++.+|++.+|..||++.+++++-
T Consensus 220 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l 262 (266)
T cd05033 220 AVEDGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTL 262 (266)
T ss_pred HHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 1 01134577899999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-29 Score=267.18 Aligned_cols=242 Identities=17% Similarity=0.286 Sum_probs=192.7
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecccccC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~g~ 96 (778)
+|.+.+.+|.|+ | .||+|+.+.+|+.|+||++.++.. .......+.+|+.++++++ ||||++++++++..
T Consensus 2 ~y~~~~~lg~g~~~--~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~----- 74 (280)
T cd05581 2 DFKFGKIIGEGSFS--TVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDE----- 74 (280)
T ss_pred CceEeeeecCCCce--EEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCC-----
Confidence 699999999997 7 899999999999999999986432 2234567889999999999 99999999998763
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+|+|||++ ++|.+++..... .....+.+++.||+.||.|||+ .+++|+||+|+||+++.+|.++|+|||
T Consensus 75 ---~~~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~i~~ql~~~l~~Lh~-~~~~H~dl~~~ni~i~~~~~~~l~df~ 147 (280)
T cd05581 75 ---ENLYFVLEYAPNGELLQYIRKYGS---LDEKCTRFYAAEILLALEYLHS-KGIIHRDLKPENILLDKDMHIKITDFG 147 (280)
T ss_pred ---ceEEEEEcCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCHHHeEECCCCCEEecCCc
Confidence 4899999999 479999887642 2344567779999999999995 999999999999999999999999999
Q ss_pred cccccCCCCCCCCC--------------CccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCC
Q 004025 175 VLSEFDGNNEAANG--------------PMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL 240 (778)
Q Consensus 175 la~~~~~~~~~~~~--------------~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p 240 (778)
++............ ........++..|++||..... .++.++|+|||||++|++++|..|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~------~~~~~~Di~slG~~l~~l~~g~~p 221 (280)
T cd05581 148 TAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEK------PAGKSSDLWALGCIIYQMLTGKPP 221 (280)
T ss_pred cccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCC------CCChhhhHHHHHHHHHHHHhCCCC
Confidence 98876543211000 0011112334589999987763 467789999999999999999988
Q ss_pred CChhhh----h----c----cCCCCcchHHHHHHHhccCCCCCCCh----HHHHhcc
Q 004025 241 SKTEEL----R----N----TASIPKSLLPDYQRLLSSMPSRRLNS----SKLIENS 281 (778)
Q Consensus 241 ~~~~~l----~----~----~~~iP~~L~~~i~~lL~~dP~~Rps~----~~lL~~~ 281 (778)
+..... . . ...+|+.+.+++++||+.+|.+||++ .++++|+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~ 278 (280)
T cd05581 222 FRGSNEYLTFQKILKLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHP 278 (280)
T ss_pred CCCccHHHHHHHHHhcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCC
Confidence 864211 1 1 13456778999999999999999999 9999997
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-29 Score=277.36 Aligned_cols=247 Identities=19% Similarity=0.259 Sum_probs=187.2
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc-
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA- 95 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g- 95 (778)
..+|++.+.||.|+ | .||+|+++.+|..|+||++..+.. ...+.+.+|+++++.++||||+++++.+.......
T Consensus 4 ~~~y~~~~~Lg~g~~g--~vy~~~~~~~~~~v~iK~i~~~~~--~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 79 (342)
T cd07854 4 GSRYMDLRPLGCGSNG--LVFSAVDSDCDKRVAVKKIVLTDP--QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLT 79 (342)
T ss_pred CcceEEEEEecCCCCE--EEEEEEECCCCcEEEEEEEecCCC--chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccc
Confidence 35799999999997 7 999999999999999999976543 33566889999999999999999998887542110
Q ss_pred -----CCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEc-CCCcE
Q 004025 96 -----TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT-QTLDW 168 (778)
Q Consensus 96 -----~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~-~~g~~ 168 (778)
......+|+|+||+ ++|..++.... .....+..++.||+.||.|||+ .+++||||||+||+++ .++.+
T Consensus 80 ~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~----l~~~~~~~~~~qi~~aL~~LH~-~givH~dikp~Nili~~~~~~~ 154 (342)
T cd07854 80 EDVGSLTELNSVYIVQEYMETDLANVLEQGP----LSEEHARLFMYQLLRGLKYIHS-ANVLHRDLKPANVFINTEDLVL 154 (342)
T ss_pred cccccccccceEEEEeecccccHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEEcCCCceE
Confidence 00013689999999 56777775433 2344566679999999999995 8999999999999998 55679
Q ss_pred EEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh---
Q 004025 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE--- 245 (778)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~--- 245 (778)
||+|||++..+........ . .....+...|+|||++.+. ..++.++|+|||||++|+|++|..||....
T Consensus 155 kl~dfg~~~~~~~~~~~~~--~-~~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~ 226 (342)
T cd07854 155 KIGDFGLARIVDPHYSHKG--Y-LSEGLVTKWYRSPRLLLSP-----NNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELE 226 (342)
T ss_pred EECCcccceecCCcccccc--c-cccccccccccCHHHHhCc-----cccCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 9999999876643211100 0 0111234579999987543 346678999999999999999998874211
Q ss_pred -hh--------------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 246 -LR--------------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 246 -l~--------------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. ....++..+.+++++||..+|.+||++.+++.|+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~ 301 (342)
T cd07854 227 QMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHP 301 (342)
T ss_pred HHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCC
Confidence 00 0123456677899999999999999999999998
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-29 Score=266.20 Aligned_cols=237 Identities=16% Similarity=0.229 Sum_probs=191.5
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
....|++.+.++.|. | .||.|.++.++..|+||++..... ..+.+.+|+..++.++||||+++++.+..+
T Consensus 17 ~~~~~~~~~~l~~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---- 87 (286)
T cd06614 17 PRELYKNLEKIGEGASG--EVYKATDRATGKEVAIKKMRLRKQ---NKELIINEILIMKDCKHPNIVDYYDSYLVG---- 87 (286)
T ss_pred ccccchHhHhccCCCCe--EEEEEEEccCCcEEEEEEEecCch---hHHHHHHHHHHHHHCCCCCeeEEEEEEEEC----
Confidence 445699999999987 6 899999999999999999986433 355688999999999999999999999874
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..+|+|+||+ ++|.+++.... .......+..++.||+.||.|||+ .+++|+||+|+||+++.+|.+||+||
T Consensus 88 ----~~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~-~gi~H~dl~p~ni~i~~~~~~~l~d~ 160 (286)
T cd06614 88 ----DELWVVMEYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHS-QNVIHRDIKSDNILLSKDGSVKLADF 160 (286)
T ss_pred ----CEEEEEEeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHh-CCeeeCCCChhhEEEcCCCCEEECcc
Confidence 3899999999 47999998764 112334456679999999999995 99999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----h--
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R-- 247 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~-- 247 (778)
|++.......... ........|++||++.+ ..++.++|+|||||++|+|++|..|+..... .
T Consensus 161 ~~~~~~~~~~~~~------~~~~~~~~y~~PE~~~~------~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~ 228 (286)
T cd06614 161 GFAAQLTKEKSKR------NSVVGTPYWMAPEVIKR------KDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLI 228 (286)
T ss_pred chhhhhccchhhh------ccccCCcccCCHhHhcC------CCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 9987654321100 11123457999999765 3467789999999999999999988753211 0
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ---------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|..+.+++++||+.+|..||++.++++|+
T Consensus 229 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 271 (286)
T cd06614 229 TTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHP 271 (286)
T ss_pred HhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhCh
Confidence 0123677899999999999999999999999997
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=295.73 Aligned_cols=249 Identities=20% Similarity=0.270 Sum_probs=186.1
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc----
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID---- 94 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~---- 94 (778)
+|+..+.+|.|+ | .||+++.|-||..||||++..+. .+.....+.+|++.|.+|+|||||+|+..+.+...+
T Consensus 480 DFEEL~lLGkGGFG--~VvkVRNKlDGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ 556 (1351)
T KOG1035|consen 480 DFEELELLGKGGFG--SVVKVRNKLDGREYAIKKIPLKA-SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVL 556 (1351)
T ss_pred hhHHHHHhcCCCCc--eEEEEeecccchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccc
Confidence 577778899999 9 99999999999999999999876 556677899999999999999999999655322100
Q ss_pred ----------------------------------------------------------------------c---------
Q 004025 95 ----------------------------------------------------------------------A--------- 95 (778)
Q Consensus 95 ----------------------------------------------------------------------g--------- 95 (778)
|
T Consensus 557 ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~ 636 (1351)
T KOG1035|consen 557 EIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDS 636 (1351)
T ss_pred cccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccccc
Confidence 0
Q ss_pred ---------------------CCc-------ccEEEEEecCCc-C-hHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHH
Q 004025 96 ---------------------TST-------KITIYIVTEPVM-P-LSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLN 145 (778)
Q Consensus 96 ---------------------~~~-------~~~lyIVtE~v~-~-L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH 145 (778)
+.. +.++||-||||. . |.+++.+..... +..+ .+..+.||++||.|+|
T Consensus 637 e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~-~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 637 EGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDE-AWRLFREILEGLAYIH 714 (1351)
T ss_pred CCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHH-HHHHHHHHHHHHHHHH
Confidence 001 168999999994 4 555555544322 2233 4556999999999999
Q ss_pred cCCCccccccCCCCeEEcCCCcEEEEecccccccCC---C---CCC-----CCCCc-cccccccCCCCCCcccccccccc
Q 004025 146 NDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG---N---NEA-----ANGPM-LQYAWLVGAQYKPVELAKSDWTA 213 (778)
Q Consensus 146 ~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~---~---~~~-----~~~~~-~~~~~~~~~~Y~aPE~~~~~~~~ 213 (778)
+ .+||||||||.|||+++++.+||||||+++.... . ... ..... .....+++.-|+|||++.+.-.
T Consensus 715 ~-~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~- 792 (1351)
T KOG1035|consen 715 D-QGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSS- 792 (1351)
T ss_pred h-CceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccc-
Confidence 5 8899999999999999999999999999987321 0 000 00111 2233455668999999876311
Q ss_pred ccCCCCCcchhHHHHHHHHHHHhCCCCCChh--------hhhccCCCCcc----------hHHHHHHHhccCCCCCCChH
Q 004025 214 VRKSPPWSIDSWGLGCLIYELFSGMRLSKTE--------ELRNTASIPKS----------LLPDYQRLLSSMPSRRLNSS 275 (778)
Q Consensus 214 ~~~~~~~~~DiwSLG~liyel~tg~~p~~~~--------~l~~~~~iP~~----------L~~~i~~lL~~dP~~Rps~~ 275 (778)
..|+.++||||||++++||+.. |.+. +++ ...||.. -..+++.|++.||.+|||+.
T Consensus 793 --~~Yn~KiDmYSLGIVlFEM~yP---F~TsMERa~iL~~LR-~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~ 866 (1351)
T KOG1035|consen 793 --NKYNSKIDMYSLGIVLFEMLYP---FGTSMERASILTNLR-KGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTAT 866 (1351)
T ss_pred --ccccchhhhHHHHHHHHHHhcc---CCchHHHHHHHHhcc-cCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHH
Confidence 3688999999999999999973 5542 223 2455544 24568899999999999999
Q ss_pred HHHhcc
Q 004025 276 KLIENS 281 (778)
Q Consensus 276 ~lL~~~ 281 (778)
++|++.
T Consensus 867 eLL~s~ 872 (1351)
T KOG1035|consen 867 ELLNSE 872 (1351)
T ss_pred HHhhcc
Confidence 999985
|
|
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.1e-29 Score=264.95 Aligned_cols=249 Identities=15% Similarity=0.162 Sum_probs=188.4
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~ 94 (778)
...+|++.+.||.|+ | +||+|+++.+++.|+||++..... ....+.+|+.+++.+ +||||+++++.+......
T Consensus 16 ~~~~~~~~~~lg~g~~~--~vy~~~~~~~~~~~~ik~~~~~~~---~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 90 (286)
T cd06638 16 PSDTWEIIETIGKGTYG--KVFKVLNKKNGSKAAVKILDPIHD---IDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVK 90 (286)
T ss_pred cccceeeeeeeccCCCc--EEEEEEECCCCceeEEEeeccccc---hHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccC
Confidence 456899999999998 8 899999999999999999864321 234578899999999 699999999987532111
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCc-CCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
....+|+||||+ ++|.+++..... ........+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+
T Consensus 91 ---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~nili~~~~~~kl~ 166 (286)
T cd06638 91 ---NGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHV-NKTIHRDVKGNNILLTTEGGVKLV 166 (286)
T ss_pred ---CCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHh-CCccccCCCHHhEEECCCCCEEEc
Confidence 034899999999 478888765321 1222334466679999999999995 899999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hh
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LR 247 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~ 247 (778)
|||++........ ......++..|+|||++..... ....++.++|+|||||++|||++|..|+.... +.
T Consensus 167 dfg~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~-~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~ 239 (286)
T cd06638 167 DFGVSAQLTSTRL------RRNTSVGTPFWMAPEVIACEQQ-LDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALF 239 (286)
T ss_pred cCCceeecccCCC------ccccccCCCcccChhhhchhhh-ccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHh
Confidence 9999877643211 0111234558999999764210 11346779999999999999999998764321 11
Q ss_pred c-----------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 N-----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ~-----------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ...++..+..++.+||+.+|.+||++.++++|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 240 KIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred hccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 1 012345688899999999999999999999997
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-29 Score=265.05 Aligned_cols=238 Identities=15% Similarity=0.174 Sum_probs=186.2
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCC---CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDD---GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~---g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~ 92 (778)
...+|++.+.+|.|+ | .||+|+.... ...|+||.+..... ....+.+.+|+.++++++||||+++++.++.+
T Consensus 4 ~~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~- 79 (270)
T cd05056 4 QREDITLGRCIGEGQFG--DVYQGVYMSPENEKIAVAVKTCKNCTS-PSVREKFLQEAYIMRQFDHPHIVKLIGVITEN- 79 (270)
T ss_pred chhhceeeeeeCCccce--eEEEEEEecCCCCCcceEEEecCCcCC-HHHHHHHHHHHHHHHhCCCCchhceeEEEcCC-
Confidence 456799999999998 8 8999997644 35799998875432 33456789999999999999999999988752
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEE
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
..|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.++.+||
T Consensus 80 --------~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~lH~-~~~~H~dl~p~nili~~~~~~~l 148 (270)
T cd05056 80 --------PVWIVMELAPLGELRSYLQVNKY--SLDLASLILYSYQLSTALAYLES-KRFVHRDIAARNVLVSSPDCVKL 148 (270)
T ss_pred --------CcEEEEEcCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHh-CCeeccccChheEEEecCCCeEE
Confidence 578999999 579999876432 12344566679999999999995 99999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh---
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL--- 246 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l--- 246 (778)
+|||++......... .......+..|+|||.+.. ..++.++|+|||||++||+++ |..||.....
T Consensus 149 ~d~g~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~ 217 (270)
T cd05056 149 GDFGLSRYLEDESYY-----KASKGKLPIKWMAPESINF------RRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDV 217 (270)
T ss_pred ccCceeeecccccce-----ecCCCCccccccChhhhcc------CCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHH
Confidence 999998776543110 0111122347999998765 356789999999999999986 8888743211
Q ss_pred ----------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 247 ----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 247 ----------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
.....+|..+.+++.+|+..+|.+||++.+++..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~ 261 (270)
T cd05056 218 IGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQ 261 (270)
T ss_pred HHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1124567789999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-30 Score=264.25 Aligned_cols=240 Identities=19% Similarity=0.261 Sum_probs=188.6
Q ss_pred Cceecc-CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecccccC
Q 004025 20 PYNIGD-PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 20 ~Y~i~~-~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~g~ 96 (778)
+|.|.. .||.|- | +|-.+.+|.+|+.+|+|++.. .+.+++|++..-.. -||||+.++|+|++.-.+
T Consensus 62 dY~is~qvLG~GinG--kV~~C~~k~T~ekfALKvL~D-------s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~-- 130 (400)
T KOG0604|consen 62 DYSISWQVLGAGING--KVVQCVHKRTQEKFALKVLLD-------SPKARREVELHWMASGHPHIVSIIDVYENSYQG-- 130 (400)
T ss_pred hheehhhhhccccCC--ceEEEEeccchhhhHHHHHhc-------CHHHHhHhhhhhhhcCCCceEEeehhhhhhccC--
Confidence 577765 467777 8 899999999999999999863 34688888876655 499999999999864322
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC---CCcEEEE
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ---TLDWKLH 171 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~---~g~~KL~ 171 (778)
...+.||||.+ |.|...|.+++..... +....-++.||+.|+.|||+ .+|.||||||+|++.+. +.-+||+
T Consensus 131 --rkcLLiVmE~meGGeLfsriq~~g~~afT-Erea~eI~~qI~~Av~~lH~-~nIAHRDlKpENLLyt~t~~na~lKLt 206 (400)
T KOG0604|consen 131 --RKCLLIVMECMEGGELFSRIQDRGDQAFT-EREASEIMKQIGLAVRYLHS-MNIAHRDLKPENLLYTTTSPNAPLKLT 206 (400)
T ss_pred --ceeeEeeeecccchHHHHHHHHcccccch-HHHHHHHHHHHHHHHHHHHh-cchhhccCChhheeeecCCCCcceEec
Confidence 57999999999 5699999887643322 33345569999999999995 99999999999999975 4459999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc---
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN--- 248 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~--- 248 (778)
|||+++.-...+.. ..-+.++.|.|||++.. ..|+..+|+||||++||-|++|.+||.+..-..
T Consensus 207 DfGFAK~t~~~~~L-------~TPc~TPyYvaPevlg~------eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aisp 273 (400)
T KOG0604|consen 207 DFGFAKETQEPGDL-------MTPCFTPYYVAPEVLGP------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP 273 (400)
T ss_pred ccccccccCCCccc-------cCCcccccccCHHHhCc------hhcCCCCCccchhHHHHHhhcCCCcccccCCccCCh
Confidence 99999877643221 11244668999999876 468889999999999999999999985432111
Q ss_pred ---------cCC--------CCcchHHHHHHHhccCCCCCCChHHHHhcccCCccccccc
Q 004025 249 ---------TAS--------IPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYF 291 (778)
Q Consensus 249 ---------~~~--------iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff 291 (778)
.+. +++...++++.||..+|.+|+++.++++|+ |+..+-
T Consensus 274 gMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hp----wi~~~~ 329 (400)
T KOG0604|consen 274 GMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHP----WINQYE 329 (400)
T ss_pred hHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCc----hhcccc
Confidence 123 345577889999999999999999999999 887654
|
|
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-29 Score=265.77 Aligned_cols=233 Identities=18% Similarity=0.221 Sum_probs=187.6
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~ 99 (778)
|++.+.||.|. | .||+|.++.++..|+||++...... .....+.+|++.+++++||||+++++.+..+
T Consensus 6 ~~~~~~ig~G~~~--~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-------- 74 (277)
T cd06641 6 FTKLEKIGKGSFG--EVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYVTKYYGSYLKD-------- 74 (277)
T ss_pred hhhheeEeecCCe--EEEEEEECCCCcEEEEEEeccccch-HHHHHHHHHHHHHHhcCCCCEeEEEEEEEeC--------
Confidence 77888899887 7 9999999999999999998754332 3456788999999999999999999999864
Q ss_pred cEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 100 ~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
..+|+||||+ ++|..++.... .....+.+++.|++.+|.|||+ .+++|+||+|+||+++.+|.++|+|||++.
T Consensus 75 ~~~~lv~e~~~~~~l~~~i~~~~----~~~~~~~~~~~~l~~~l~~lh~-~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~ 149 (277)
T cd06641 75 TKLWIIMEYLGGGSALDLLEPGP----LDETQIATILREILKGLDYLHS-EKKIHRDIKAANVLLSEHGEVKLADFGVAG 149 (277)
T ss_pred CeEEEEEEeCCCCcHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHcc-CCeecCCCCHHhEEECCCCCEEEeecccce
Confidence 4899999999 46888886533 2345567779999999999995 999999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh---------c
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---------N 248 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~---------~ 248 (778)
.+...... .....+...|++||.+.+ ...+.++|+|||||++|+|++|..|+...... .
T Consensus 150 ~~~~~~~~------~~~~~~~~~y~~PE~~~~------~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~ 217 (277)
T cd06641 150 QLTDTQIK------RNTFVGTPFWMAPEVIKQ------SAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNN 217 (277)
T ss_pred ecccchhh------hccccCCccccChhhhcc------CCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCC
Confidence 66432110 111123447999999865 24567899999999999999999887532110 0
Q ss_pred ----cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ----~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+|..+.+++.+||..+|.+||++.++++|+
T Consensus 218 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~ 254 (277)
T cd06641 218 PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHK 254 (277)
T ss_pred CCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCH
Confidence 123567788999999999999999999999997
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-29 Score=281.23 Aligned_cols=243 Identities=17% Similarity=0.150 Sum_probs=185.0
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCC-----CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeee
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDD-----GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHST 88 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~-----g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~ 88 (778)
.+...|++++.||.|+ | +||+|++... +..|+||++.... .....+.+.+|+++|+.|. ||||+++++++
T Consensus 34 ~~~~~~~~~~~LG~G~fG--~Vy~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~ 110 (400)
T cd05105 34 FPRDGLVLGRILGSGAFG--KVVEGTAYGLSRSQPVMKVAVKMLKPTA-RSSEKQALMSELKIMTHLGPHLNIVNLLGAC 110 (400)
T ss_pred ccccceehhheecCCCCc--eEEEEEEcccCCCCCceEEEEEecCCCC-ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEE
Confidence 3566899999999998 8 9999987533 3469999997542 2334567899999999996 99999999999
Q ss_pred EecccccCCcccEEEEEecCC--cChHHHHHHhCcC--------------------------------------------
Q 004025 89 EVENIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------------------------------------------- 122 (778)
Q Consensus 89 e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~-------------------------------------------- 122 (778)
... ..+||||||| ++|.++|......
T Consensus 111 ~~~--------~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (400)
T cd05105 111 TKS--------GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQ 182 (400)
T ss_pred ccC--------CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccccccc
Confidence 763 3799999999 6898888653210
Q ss_pred -------------------------------------------------CCcchHHHHHHHHHHHHHHHHHHcCCCcccc
Q 004025 123 -------------------------------------------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHG 153 (778)
Q Consensus 123 -------------------------------------------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~ 153 (778)
.......+..++.||+.||.|||+ .+++||
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~ivH~ 261 (400)
T cd05105 183 ADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLAS-KNCVHR 261 (400)
T ss_pred ccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh-CCeeCC
Confidence 001122345568999999999995 899999
Q ss_pred ccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHH
Q 004025 154 NVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYE 233 (778)
Q Consensus 154 dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liye 233 (778)
||||+||+++.++.+||+|||++.......... ......++..|+|||++.+ ..++.++|+|||||++||
T Consensus 262 dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~DiwSlGvil~e 331 (400)
T cd05105 262 DLAARNVLLAQGKIVKICDFGLARDIMHDSNYV----SKGSTFLPVKWMAPESIFD------NLYTTLSDVWSYGILLWE 331 (400)
T ss_pred CCChHhEEEeCCCEEEEEeCCcceecccccccc----ccCCcCCCcceEChhhhcC------CCCCchhhHHHHHHHHHH
Confidence 999999999999999999999988764321110 0111233457999999876 356789999999999999
Q ss_pred HHh-CCCCCChhh----h----------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 234 LFS-GMRLSKTEE----L----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 234 l~t-g~~p~~~~~----l----------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
|++ |..||.... . .....+|..+.+++.+||+.+|..||++.++.+.
T Consensus 332 llt~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~ 393 (400)
T cd05105 332 IFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDI 393 (400)
T ss_pred HHHCCCCCCcccchhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHH
Confidence 997 777764321 1 1113467778999999999999999999888764
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-29 Score=275.70 Aligned_cols=246 Identities=17% Similarity=0.282 Sum_probs=189.8
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.||.|. | .||.|.++.+|+.|+||++.+........+.+.+|+.++++++||||+++++++...... .
T Consensus 17 ~~y~~~~~lg~G~~g--~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~--~ 92 (345)
T cd07877 17 ERYQNLSPVGSGAYG--SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSL--E 92 (345)
T ss_pred CceEEEEEeeecCCe--EEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccc--c
Confidence 5799999999998 8 899999999999999999986433333456688899999999999999999988643211 0
Q ss_pred cccEEEEEecCCc-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
....+|+++|+++ +|..+++... .....+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++
T Consensus 93 ~~~~~~lv~~~~~~~L~~~~~~~~----l~~~~~~~i~~qi~~aL~~LH~-~~ivH~dlkp~NIll~~~~~~kl~dfg~~ 167 (345)
T cd07877 93 EFNDVYLVTHLMGADLNNIVKCQK----LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLA 167 (345)
T ss_pred ccccEEEEehhcccCHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHH-CCeeecCCChHHEEEcCCCCEEEeccccc
Confidence 0236899999994 6877776433 2334466679999999999995 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hh-----
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LR----- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~----- 247 (778)
....... ....++..|+|||.+.+. ..++.++|+|||||++|+|++|.+||.... +.
T Consensus 168 ~~~~~~~---------~~~~~~~~y~aPE~~~~~-----~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~ 233 (345)
T cd07877 168 RHTDDEM---------TGYVATRWYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 233 (345)
T ss_pred ccccccc---------cccccCCCccCHHHHhCc-----cCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 7653311 112334579999987642 245678999999999999999998874211 00
Q ss_pred ----------------------cc------------CCCCcchHHHHHHHhccCCCCCCChHHHHhcccCCccccccc
Q 004025 248 ----------------------NT------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYF 291 (778)
Q Consensus 248 ----------------------~~------------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff 291 (778)
.+ ...+..+.+++.+||+.+|.+|+++.+++.|+ |+..+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~----~f~~~~ 307 (345)
T cd07877 234 VGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA----YFAQYH 307 (345)
T ss_pred hCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcCh----hhhhcC
Confidence 00 02345577899999999999999999999998 555443
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.2e-29 Score=262.76 Aligned_cols=241 Identities=13% Similarity=0.194 Sum_probs=186.8
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC---chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA---QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~---~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
.+|++++.+|.|+ | .||.|+++.++..|+||.+..... .......+++|+..++.++||||+++++.+....
T Consensus 2 ~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~-- 77 (264)
T cd06653 2 VNWRLGKLLGRGAFG--EVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPE-- 77 (264)
T ss_pred CceeeeeeEccCCCe--EEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCC--
Confidence 4799999999998 8 899999999999999999864321 2244567899999999999999999999987643
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
...+|+++||+ ++|.+++...... ....+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+|
T Consensus 78 ----~~~~~~v~e~~~~~~L~~~~~~~~~l---~~~~~~~~~~~i~~al~~LH~-~~i~H~dl~p~ni~i~~~~~~~l~d 149 (264)
T cd06653 78 ----EKKLSIFVEYMPGGSIKDQLKAYGAL---TENVTRRYTRQILQGVSYLHS-NMIVHRDIKGANILRDSAGNVKLGD 149 (264)
T ss_pred ----CCEEEEEEEeCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEEcCCCCEEECc
Confidence 24789999999 4798888765421 233355568999999999995 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hhc
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRN 248 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~~ 248 (778)
||+++.......... . .....+...|+|||++.+ ...+.++|+|||||++|++++|..||.... ...
T Consensus 150 fg~~~~~~~~~~~~~-~--~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~ 220 (264)
T cd06653 150 FGASKRIQTICMSGT-G--IKSVTGTPYWMSPEVISG------EGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFK 220 (264)
T ss_pred cccccccccccccCc-c--ccccCCcccccCHhhhcC------CCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHH
Confidence 999987643211000 0 011234457999999876 346678999999999999999998885321 110
Q ss_pred ----------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ----------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+++.+.+.+.+||. ++.+||++.+++.|+
T Consensus 221 ~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~ 262 (264)
T cd06653 221 IATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHP 262 (264)
T ss_pred HHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCC
Confidence 12234456777889988 579999999999997
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.3e-29 Score=264.86 Aligned_cols=237 Identities=14% Similarity=0.165 Sum_probs=180.9
Q ss_pred ceeccCCCCCC-CceEEEEeE----ECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGT----SKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~----~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
|.+.+.+|.|+ | +||.++ ...++..|+||.+..... ......+.+|++.|+.++||||+++++++....
T Consensus 6 ~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--- 79 (283)
T cd05080 6 LKKIRVLGEGHFG--KVSLYCYDPANDGTGEMVAVKTLKRECG-QQNTSGWKKEINILKTLYHENIVKYKGCCSEQG--- 79 (283)
T ss_pred ceeceecccCCCc--EEEEeeEccccCCCCceEEEEEeccccC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC---
Confidence 48899999998 8 786654 456788999999876432 234566789999999999999999999887543
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
...+|+||||+ ++|.+++..... ....+..++.||+.||.|||+ .+++||||||+||+++.++.+||+||
T Consensus 80 ---~~~~~lv~e~~~~~~l~~~~~~~~l----~~~~~~~i~~~l~~~l~~lH~-~~i~H~dlkp~Nili~~~~~~~l~df 151 (283)
T cd05080 80 ---GKGLQLIMEYVPLGSLRDYLPKHKL----NLAQLLLFAQQICEGMAYLHS-QHYIHRDLAARNVLLDNDRLVKIGDF 151 (283)
T ss_pred ---CceEEEEecCCCCCCHHHHHHHcCC----CHHHHHHHHHHHHHHHHHHHH-CCeeccccChheEEEcCCCcEEEeec
Confidence 34799999999 579988876442 334456679999999999995 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh--------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-------- 245 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-------- 245 (778)
|++.......... .. ......+..|++||.+.+. ..+.++|+|||||++|||++|..|+....
T Consensus 152 g~~~~~~~~~~~~--~~-~~~~~~~~~~~~PE~~~~~------~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~ 222 (283)
T cd05080 152 GLAKAVPEGHEYY--RV-REDGDSPVFWYAVECLKEN------KFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIG 222 (283)
T ss_pred ccccccCCcchhh--cc-CCCCCCCceeeCHhHhccc------CCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhc
Confidence 9988765421100 00 0011223468999988753 46679999999999999999986653210
Q ss_pred ----------hh----------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 246 ----------LR----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 246 ----------l~----------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
+. ....+|..+.+++.+|++.+|..||++.++++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~ 277 (283)
T cd05080 223 PKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPI 277 (283)
T ss_pred ccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence 00 012356788999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.3e-29 Score=258.92 Aligned_cols=239 Identities=23% Similarity=0.293 Sum_probs=193.0
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.++.|+ | .||.+.+..++..|+||++............+.+|++.++.++|||++++++.+...
T Consensus 1 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~------- 71 (258)
T cd08215 1 KYEIIKQIGKGSFG--KVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEK------- 71 (258)
T ss_pred CceEEeeeccCCCe--EEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecC-------
Confidence 588999999987 6 899999999999999999987655445566788999999999999999999999864
Q ss_pred ccEEEEEecCC--cChHHHHHHhCc-CCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+|+|+|++ ++|.+++..... ........+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+|||+
T Consensus 72 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~-~~~~H~dl~~~nil~~~~~~~~l~d~~~ 149 (258)
T cd08215 72 -GKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHS-RKILHRDIKPQNIFLTSNGLVKLGDFGI 149 (258)
T ss_pred -CEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHh-CCEecccCChHHeEEcCCCcEEECCccc
Confidence 3899999999 479998887531 1222344466679999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc-------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------- 248 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~------- 248 (778)
+........ . .....+...|+|||...+ ..++.++|+|+||+++|+|++|..++.......
T Consensus 150 ~~~~~~~~~-----~-~~~~~~~~~y~~pe~~~~------~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~ 217 (258)
T cd08215 150 SKVLSSTVD-----L-AKTVVGTPYYLSPELCQN------KPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILK 217 (258)
T ss_pred eeecccCcc-----e-ecceeeeecccChhHhcc------CCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhc
Confidence 887654320 0 111234457999998765 346778999999999999999998875432111
Q ss_pred --c----CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 --T----ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 --~----~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ..++..+.+.+++||+.+|.+||++.++++|+
T Consensus 218 ~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~ 256 (258)
T cd08215 218 GQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSP 256 (258)
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCC
Confidence 1 24567788999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.9e-29 Score=262.74 Aligned_cols=234 Identities=17% Similarity=0.204 Sum_probs=180.8
Q ss_pred cCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEE
Q 004025 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~ly 103 (778)
..+|.|+ | .||+|+++.++..|++|.+..+.. ...+.+.+|+++++.++||||+++++.+..+ ..+|
T Consensus 14 ~~lg~g~~g--~v~~~~~~~~~~~v~~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--------~~~~ 81 (268)
T cd06624 14 VVLGKGTYG--IVYAARDLSTQVRIAIKEIPERDS--RYVQPLHEEIALHSYLKHRNIVQYLGSDSEN--------GFFK 81 (268)
T ss_pred EEEecCCce--EEEEeEecCCCcEEEEEEecCCCH--HHHHHHHHHHHHHHhcCCCCeeeeeeeeccC--------CEEE
Confidence 3577776 7 899999999999999999876432 3456788999999999999999999998764 3899
Q ss_pred EEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC-CCcEEEEecccccccC
Q 004025 104 IVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ-TLDWKLHAFDVLSEFD 180 (778)
Q Consensus 104 IVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~-~g~~KL~dFgla~~~~ 180 (778)
+|+||+ ++|.+++.............+..++.||+.||.|||+ .+++||||+|+||+++. ++.+||+|||++....
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~ 160 (268)
T cd06624 82 IFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHD-NQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLA 160 (268)
T ss_pred EEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHH-CCEeecCCCHHHEEEcCCCCeEEEecchhheecc
Confidence 999999 5799988764211111233455668999999999995 89999999999999976 7899999999987664
Q ss_pred CCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-----h------hcc
Q 004025 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-----L------RNT 249 (778)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-----l------~~~ 249 (778)
..+.. .....++..|+|||++.+.. ..++.++|+||||+++|+|++|..|+.... . ...
T Consensus 161 ~~~~~------~~~~~~~~~~~aPE~~~~~~----~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 230 (268)
T cd06624 161 GINPC------TETFTGTLQYMAPEVIDKGP----RGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIH 230 (268)
T ss_pred cCCCc------cccCCCCccccChhhhcccc----ccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccC
Confidence 32111 11123455899999976421 235678999999999999999998874311 0 011
Q ss_pred C----CCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 250 A----SIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 250 ~----~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. .++..+..++++||..+|.+||++.+++.|+
T Consensus 231 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~ 266 (268)
T cd06624 231 PEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDP 266 (268)
T ss_pred CCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCC
Confidence 1 2445677889999999999999999999998
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-29 Score=271.00 Aligned_cols=239 Identities=14% Similarity=0.162 Sum_probs=183.5
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCc--EEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEeccc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSP--VSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENI 93 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~--VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~ 93 (778)
-.+|++.+.+|.|+ | +||+|.++.++.. ++||.+... ........+.+|+.+++++ +||||++++++++.+
T Consensus 6 ~~~~~~~~~lg~G~~g--~V~~a~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~-- 80 (303)
T cd05088 6 WNDIKFQDVIGEGNFG--QVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR-- 80 (303)
T ss_pred hhhceeeeeecCCCCc--eEEEEEEccCCceeeEEEEEeccc-CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCC--
Confidence 34799999999998 8 9999999888765 466665532 2233456788999999999 899999999999764
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCC-------------CcchHHHHHHHHHHHHHHHHHHcCCCccccccCCC
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEG-------------SQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLS 158 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~-------------~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~ 158 (778)
..+|+|+||+ ++|.+++....... ......+..++.||+.||.|||+ .+++||||||+
T Consensus 81 ------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~-~gi~H~dlkp~ 153 (303)
T cd05088 81 ------GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ-KQFIHRDLAAR 153 (303)
T ss_pred ------CCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh-CCccccccchh
Confidence 3799999999 57999987654211 12334466679999999999995 99999999999
Q ss_pred CeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-C
Q 004025 159 SVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-G 237 (778)
Q Consensus 159 NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g 237 (778)
||+++.++.+||+|||++....... .......+..|++||++.+ ..++.++|+|||||++|||++ |
T Consensus 154 Nili~~~~~~kl~dfg~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~ellt~g 220 (303)
T cd05088 154 NILVGENYVAKIADFGLSRGQEVYV-------KKTMGRLPVRWMAIESLNY------SVYTTNSDVWSYGVLLWEIVSLG 220 (303)
T ss_pred eEEecCCCcEEeCccccCcccchhh-------hcccCCCcccccCHHHHhc------cCCcccccchhhhhHHHHHHhcC
Confidence 9999999999999999986432110 0001112347999998865 346678999999999999998 8
Q ss_pred CCCCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 238 MRLSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 238 ~~p~~~~~l~-------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
..||...... ....++..+.+++.+||..+|..||++.++++..
T Consensus 221 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l 277 (303)
T cd05088 221 GTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSL 277 (303)
T ss_pred CCCcccCChHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 8877432111 1123567788999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-29 Score=275.81 Aligned_cols=244 Identities=16% Similarity=0.173 Sum_probs=185.2
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECC-----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeE
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKD-----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTE 89 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~-----~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e 89 (778)
+..+|++.+.||.|+ | .||.|.+.. +++.|+||++..... ....+.+.+|+.+++++ +||||+++++.+.
T Consensus 5 ~~~~~~i~~~lG~G~fg--~Vy~a~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~ 81 (337)
T cd05054 5 PRDRLKLGKPLGRGAFG--KVIQASAFGIEKSASCRTVAVKMLKEGAT-ASEYKALMTELKILIHIGHHLNVVNLLGACT 81 (337)
T ss_pred CHHHhhhhcccccCcCc--eEEeccccccccccccceeeeeeccCCCC-HHHHHHHHHHHHHHHhhccCcchhheeeeEe
Confidence 455799999999998 8 899997543 457899999975432 23456678899999999 7999999999886
Q ss_pred ecccccCCcccEEEEEecCC--cChHHHHHHhCcC---------------------------------------------
Q 004025 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLE--------------------------------------------- 122 (778)
Q Consensus 90 ~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~--------------------------------------------- 122 (778)
.+ ...+|+++||+ ++|.++|......
T Consensus 82 ~~-------~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (337)
T cd05054 82 KP-------GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLS 154 (337)
T ss_pred cC-------CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchh
Confidence 53 24799999999 5798888653210
Q ss_pred -------------CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCC
Q 004025 123 -------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGP 189 (778)
Q Consensus 123 -------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~ 189 (778)
.......+..++.||+.||.|||+ .+|+||||||+||+++.++.+||+|||++..+......
T Consensus 155 ~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~-~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~---- 229 (337)
T cd05054 155 DVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLAS-RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY---- 229 (337)
T ss_pred hcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCcceEEEeCCCcEEEeccccchhcccCcch----
Confidence 011233355668999999999995 99999999999999999999999999999876432110
Q ss_pred ccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhh----h----hc------cCCCCc
Q 004025 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE----L----RN------TASIPK 254 (778)
Q Consensus 190 ~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~----l----~~------~~~iP~ 254 (778)
.......++..|+|||++.+ ..++.++|+|||||++|||++ |..||.... + .. ...++.
T Consensus 230 ~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (337)
T cd05054 230 VRKGDARLPLKWMAPESIFD------KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATP 303 (337)
T ss_pred hhccCCCCCccccCcHHhcC------CCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCH
Confidence 00111122347999999876 367789999999999999997 887774311 1 11 123456
Q ss_pred chHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 255 SLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 255 ~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.+.+++.+||+.+|..||++.+++++-
T Consensus 304 ~~~~l~~~cl~~~p~~RPs~~ell~~l 330 (337)
T cd05054 304 EIYSIMLDCWHNNPEDRPTFSELVEIL 330 (337)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 788899999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.8e-29 Score=261.74 Aligned_cols=236 Identities=17% Similarity=0.180 Sum_probs=183.8
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
...|++.+.+|.|+ | .||+|... ++..|+||.+..... ..+.+.+|++.+++++||||++++++++..
T Consensus 5 ~~~~~~~~~lg~g~~~--~v~~~~~~-~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 73 (261)
T cd05068 5 RTSIQLLRKLGAGQFG--EVWEGLWN-NTTPVAVKTLKPGTM---DPKDFLAEAQIMKKLRHPKLIQLYAVCTLE----- 73 (261)
T ss_pred hhheeeEEEecccCCc--cEEEEEec-CCeEEEEEeeCCCcc---cHHHHHHHHHHHHHCCCCCccceeEEEecC-----
Confidence 45699999999998 8 89999975 457899999875432 234578899999999999999999988764
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+|+||||+ ++|.+++..... .......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 74 ---~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~Nil~~~~~~~~l~dfg 148 (261)
T cd05068 74 ---EPIYIVTELMKYGSLLEYLQGGAG-RALKLPQLIDMAAQVASGMAYLEA-QNYIHRDLAARNVLVGENNICKVADFG 148 (261)
T ss_pred ---CCeeeeeecccCCcHHHHHhccCC-CCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCcceEEEcCCCCEEECCcc
Confidence 3789999999 579999876541 112334456669999999999995 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR------ 247 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~------ 247 (778)
++.......... ......+..|++||++.+ ..++.++|+|||||++|||++ |..||......
T Consensus 149 ~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~ 217 (261)
T cd05068 149 LARVIKEDIYEA-----REGAKFPIKWTAPEAALY------NRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQV 217 (261)
T ss_pred eEEEccCCcccc-----cCCCcCceeccCcccccc------CCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence 998775321100 001112247999998876 356778999999999999999 88777542111
Q ss_pred -c------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 -N------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 -~------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. ...+|..+.+++.+|++.+|..||++.++++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~ 257 (261)
T cd05068 218 DQGYRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWK 257 (261)
T ss_pred HcCCCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHH
Confidence 1 13456788999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-29 Score=274.07 Aligned_cols=250 Identities=18% Similarity=0.260 Sum_probs=190.4
Q ss_pred CceeccCCCCCC-CceEEEEeEECCC--CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEeccccc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDD--GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDA 95 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~--g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~g 95 (778)
+|++.+.||.|. | .||.++++.+ +..|+||.+..........+.+.+|+.+++.++ ||||+++++........
T Consensus 1 ~y~~~~~lg~G~~g--~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~- 77 (332)
T cd07857 1 RYELIKELGQGAYG--IVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGN- 77 (332)
T ss_pred CceEEEEccccCCe--EEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeecccc-
Confidence 589999999988 8 8999999988 899999998754333334556788999999995 99999999876532111
Q ss_pred CCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
...+|+++|++ .+|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 78 ---~~~~~~~~e~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~-~givH~dlkp~Nili~~~~~~kl~Dfg 150 (332)
T cd07857 78 ---FNELYLYEELMEADLHQIIRSGQP---LTDAHFQSFIYQILCGLKYIHS-ANVLHRDLKPGNLLVNADCELKICDFG 150 (332)
T ss_pred ---CCcEEEEEecccCCHHHHHhcCCC---CCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHeEEcCCCCEEeCcCC
Confidence 24789999999 578888765332 2234466679999999999995 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh--------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------- 246 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l-------- 246 (778)
++..+........ .......++..|+|||+..+. ..++.++|+|||||++|+|++|.+||.....
T Consensus 151 ~a~~~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~-----~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~ 223 (332)
T cd07857 151 LARGFSENPGENA--GFMTEYVATRWYRAPEIMLSF-----QSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQIL 223 (332)
T ss_pred Cceeccccccccc--ccccCcccCccccCcHHHhCC-----CCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHH
Confidence 9987654221111 011122445689999987653 3466789999999999999999988753210
Q ss_pred -----------h------------c------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcccCCcccccc
Q 004025 247 -----------R------------N------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEY 290 (778)
Q Consensus 247 -----------~------------~------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~f 290 (778)
. . ...++..+.+++.+||+.+|..||++.+++.|+ |+..|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~----~~~~~ 298 (332)
T cd07857 224 QVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHP----YLAIW 298 (332)
T ss_pred HHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcCh----hhhhh
Confidence 0 0 012456688899999999999999999999998 65443
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.7e-29 Score=266.31 Aligned_cols=239 Identities=13% Similarity=0.176 Sum_probs=182.8
Q ss_pred CceeccCCCCCC-CceEEEEeEECC-----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKD-----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~-----~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
+|++.+.+|.|+ | +||+|+... ....|++|.+..... ......+.+|+.+++.++||||+++++.+..+
T Consensus 1 ~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-- 75 (290)
T cd05045 1 NLVLGKTLGEGEFG--KVVKATAFRLKGRAGYTTVAVKMLKENAS-SSELRDLLSEFNLLKQVNHPHVIKLYGACSQD-- 75 (290)
T ss_pred CccccccccCcCCc--ceEEEEEecCCCCCcceeEEEEecCCCCC-HHHHHHHHHHHHHHhhCCCCCEeeEEEEEecC--
Confidence 488999999998 8 899998753 235688888865432 23456788999999999999999999998764
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcC---------------------CCcchHHHHHHHHHHHHHHHHHHcCCCc
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLE---------------------GSQRDEYYAWGLNQIAKAVSFLNNDCKL 150 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~---------------------~~~~~~~i~~gl~QI~~aL~fLH~~~~i 150 (778)
...|+++||+ ++|.+++...... .......+..++.||+.||.|||+ .++
T Consensus 76 ------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~i 148 (290)
T cd05045 76 ------GPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAE-MKL 148 (290)
T ss_pred ------CCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHH-CCe
Confidence 3789999999 5799888753211 112234456679999999999995 999
Q ss_pred cccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHH
Q 004025 151 VHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCL 230 (778)
Q Consensus 151 vH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~l 230 (778)
+||||||+||+++.++.+||+|||+++......... .......+..|++||.+.+ ..++.++|+|||||+
T Consensus 149 vH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~----~~~~~~~~~~y~apE~~~~------~~~~~~~Di~slG~~ 218 (290)
T cd05045 149 VHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYV----KRSKGRIPVKWMAIESLFD------HIYTTQSDVWSFGVL 218 (290)
T ss_pred ehhhhhhheEEEcCCCcEEeccccccccccCccchh----cccCCCCCccccCHHHHcc------CCcchHhHHHHHHHH
Confidence 999999999999999999999999987664322110 0111123457999998765 356788999999999
Q ss_pred HHHHHh-CCCCCChhhhhc-------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 231 IYELFS-GMRLSKTEELRN-------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 231 iyel~t-g~~p~~~~~l~~-------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
+|||++ |..||....... ...++..+..++.+||+.+|.+||++.++++.
T Consensus 219 l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~ 282 (290)
T cd05045 219 LWEIVTLGGNPYPGIAPERLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKE 282 (290)
T ss_pred HHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHH
Confidence 999998 877775322111 23456788999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.4e-29 Score=260.35 Aligned_cols=232 Identities=15% Similarity=0.238 Sum_probs=179.7
Q ss_pred cCCCCCC-CceEEEEeEECCC-CC--cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCccc
Q 004025 25 DPYPSAW-GSWSHFQGTSKDD-GS--PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKI 100 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~-g~--~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~ 100 (778)
+.+|.|+ | +||+|.++.+ +. .|+||.+...... ...+.+.+|++.+++++||||+++++.+.. .
T Consensus 1 ~~ig~g~~~--~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~-------- 68 (257)
T cd05040 1 KKLGDGSFG--VVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-H-------- 68 (257)
T ss_pred CcCCccCcc--cEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccceeEEEcC-C--------
Confidence 3577777 7 8999998663 33 5899999865443 456778999999999999999999999875 2
Q ss_pred EEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccc
Q 004025 101 TIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (778)
Q Consensus 101 ~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~ 178 (778)
.+|+||||+ ++|.+++..... .......+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+|||++..
T Consensus 69 ~~~~v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~di~p~nil~~~~~~~kl~dfg~~~~ 146 (257)
T cd05040 69 PLMMVTELAPLGSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLES-KRFIHRDLAARNILLASDDKVKIGDFGLMRA 146 (257)
T ss_pred eEEEEEEecCCCcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHh-CCccccccCcccEEEecCCEEEecccccccc
Confidence 789999998 589999887542 222334455568999999999995 8999999999999999999999999999987
Q ss_pred cCCCCCCCCCCcccc-ccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChh---h-hh-----
Q 004025 179 FDGNNEAANGPMLQY-AWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTE---E-LR----- 247 (778)
Q Consensus 179 ~~~~~~~~~~~~~~~-~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~---~-l~----- 247 (778)
+...... +... ....+..|+|||.+.+ ..++.++|+|||||++|||++ |..|+... + ..
T Consensus 147 ~~~~~~~----~~~~~~~~~~~~y~~pE~~~~------~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~ 216 (257)
T cd05040 147 LPQNEDH----YVMEEHLKVPFAWCAPESLRT------RTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKE 216 (257)
T ss_pred ccccccc----eecccCCCCCceecCHHHhcc------cCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhc
Confidence 7542211 1011 1123347999998875 356778999999999999998 88887421 1 11
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 -----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 -----~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+|..+.+++.+|+..+|++||++.++++.
T Consensus 217 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~ 254 (257)
T cd05040 217 GERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREF 254 (257)
T ss_pred CCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHH
Confidence 112467788999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.5e-29 Score=261.42 Aligned_cols=235 Identities=16% Similarity=0.255 Sum_probs=182.7
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEEE
Q 004025 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104 (778)
Q Consensus 27 lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~lyI 104 (778)
+|.|. | .||.++++.+|+.|+||++...... ....+.+.+|+++++.++||||+++++.++.+ ..+|+
T Consensus 1 lg~g~~~--~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--------~~~~l 70 (265)
T cd05579 1 ISKGAYG--RVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGK--------KNLYL 70 (265)
T ss_pred CCCCCce--EEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecC--------cEEEE
Confidence 35555 6 8999999999999999999764332 24566789999999999999999999998763 48999
Q ss_pred EecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCCC
Q 004025 105 VTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGN 182 (778)
Q Consensus 105 VtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~ 182 (778)
++||+ ++|..++...+. .....+..++.||+.||.|||. .+++||||+|+||+++.++.+||+|||++......
T Consensus 71 v~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~L~~lH~-~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~ 146 (265)
T cd05579 71 VMEYLPGGDLASLLENVGS---LDEDVARIYIAEIVLALEYLHS-NGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVR 146 (265)
T ss_pred EEecCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-cCeecCCCCHHHeEEcCCCCEEEEecccchhcccC
Confidence 99999 479999887542 2344466679999999999995 99999999999999999999999999998765432
Q ss_pred CCCCC--CCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc------------
Q 004025 183 NEAAN--GPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------------ 248 (778)
Q Consensus 183 ~~~~~--~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~------------ 248 (778)
..... .............|++||..... ..+.++|+|||||++|++++|..||.......
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~------~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 220 (265)
T cd05579 147 RQINLNDDEKEDKRIVGTPDYIAPEVILGQ------GHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEW 220 (265)
T ss_pred cccccccccccccCcccCccccCHHHhcCC------CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCC
Confidence 11000 00001112334589999998763 46678999999999999999998875332110
Q ss_pred --cCCCCcchHHHHHHHhccCCCCCCCh---HHHHhcc
Q 004025 249 --TASIPKSLLPDYQRLLSSMPSRRLNS---SKLIENS 281 (778)
Q Consensus 249 --~~~iP~~L~~~i~~lL~~dP~~Rps~---~~lL~~~ 281 (778)
...+|..+.+++++||+.+|.+||++ .++++|+
T Consensus 221 ~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~ 258 (265)
T cd05579 221 PEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHP 258 (265)
T ss_pred CccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCc
Confidence 11237788999999999999999999 9999998
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.6e-29 Score=260.86 Aligned_cols=237 Identities=16% Similarity=0.190 Sum_probs=185.6
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
+...+|++.+.+|.|+ | +||+|..+ ++..|+||.+..... ....+.+|+..++.++||||+++++.++.+
T Consensus 3 ~~~~~~~i~~~ig~g~~~--~v~~~~~~-~~~~~~vK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 73 (261)
T cd05034 3 IPRESLKLERKLGAGQFG--EVWMGTWN-GTTKVAVKTLKPGTM---SPEAFLQEAQIMKKLRHDKLVQLYAVCSEE--- 73 (261)
T ss_pred cchhheeeeeeeccCcce--EEEEEEEc-CCceEEEEEecCCcc---CHHHHHHHHHHHhhCCCCCEeeeeeeeecC---
Confidence 3567899999999998 8 89999976 567899999875432 234688999999999999999999998763
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+|+||||+ ++|.+++...... ......+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+|
T Consensus 74 -----~~~~~v~e~~~~~~L~~~i~~~~~~-~~~~~~~~~~~~~i~~al~~lh~-~~i~h~di~p~nili~~~~~~~l~d 146 (261)
T cd05034 74 -----EPIYIVTEYMSKGSLLDFLKSGEGK-KLRLPQLVDMAAQIAEGMAYLES-RNYIHRDLAARNILVGENLVCKIAD 146 (261)
T ss_pred -----CceEEEEeccCCCCHHHHHhccccC-CCCHHHHHHHHHHHHHHHHHHHh-CCcccCCcchheEEEcCCCCEEECc
Confidence 3789999999 5799988764311 22344466779999999999995 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh----h
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL----R 247 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l----~ 247 (778)
||++..+...... .......+..|+|||.+.+ ..++.++|+|||||++|++++ |..||..... .
T Consensus 147 ~g~~~~~~~~~~~-----~~~~~~~~~~y~~PE~~~~------~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~ 215 (261)
T cd05034 147 FGLARLIEDDEYT-----AREGAKFPIKWTAPEAANY------GRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLE 215 (261)
T ss_pred cccceeccchhhh-----hhhccCCCccccCHHHhcc------CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 9998776532100 0111122347999999876 356778999999999999998 8877743211 1
Q ss_pred c---------cCCCCcchHHHHHHHhccCCCCCCChHHHHh
Q 004025 248 N---------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 248 ~---------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
. ....|..+.+++.+||..+|.+||++.++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 216 QVERGYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred HHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 1 1235678899999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.9e-29 Score=264.04 Aligned_cols=241 Identities=16% Similarity=0.195 Sum_probs=183.4
Q ss_pred CCCceeccCCCCCC-CceEEEEeEE----CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTS----KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~----k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~ 92 (778)
...|++.+.+|.|+ | +||.|.. ..++..|+||.+... .....+.+.+|+++|++++||||+++++.+....
T Consensus 3 ~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 78 (284)
T cd05081 3 ERHLKFIQQLGKGNFG--SVELCRYDPLQDNTGEVVAVKKLQHS--TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 78 (284)
T ss_pred cccceeeeeccCCCCc--eEEEEEecCCcCCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCC
Confidence 45799999999998 8 8999874 457889999998754 2334567889999999999999999999876433
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEE
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
...+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.++.+||
T Consensus 79 ------~~~~~lv~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~~l~~aL~~LH~-~~i~H~dlkp~nili~~~~~~~l 149 (284)
T cd05081 79 ------RRNLRLVMEYLPYGSLRDYLQKHRE--RLDHRKLLLYASQICKGMEYLGS-KRYVHRDLATRNILVESENRVKI 149 (284)
T ss_pred ------CCceEEEEEecCCCCHHHHHHhcCc--CCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCHhhEEECCCCeEEE
Confidence 34789999999 589999875431 12233455568999999999995 89999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-----
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----- 245 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----- 245 (778)
+|||++.......... ........+..|+|||+..+ ..++.++|+|||||++|||++|..++....
T Consensus 150 ~dfg~~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~ 220 (284)
T cd05081 150 GDFGLTKVLPQDKEYY---KVREPGESPIFWYAPESLTE------SKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMR 220 (284)
T ss_pred CCCcccccccCCCcce---eecCCCCCceEeeCHHHhcc------CCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhh
Confidence 9999998765422100 00011122336999999876 356779999999999999999754422110
Q ss_pred ------------------h------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 246 ------------------L------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 246 ------------------l------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
+ .....+|..+.+++.+||..+|..||++.++++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 279 (284)
T cd05081 221 MMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQ 279 (284)
T ss_pred hcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 0 0012456779999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=267.26 Aligned_cols=235 Identities=16% Similarity=0.162 Sum_probs=184.6
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
|...+++|.|+ | +||+|+++.+|..|+||++...... ......+.+|++.++.++||||++++++++..
T Consensus 23 ~~~~~~lg~g~~g--~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------- 93 (313)
T cd06633 23 FVGLHEIGHGSFG--AVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKE------- 93 (313)
T ss_pred hhcceeeccCCCe--EEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeC-------
Confidence 66777899987 7 9999999999999999999864332 23445688899999999999999999999874
Q ss_pred ccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 99 ~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
...|+||||+ ++|..++...... .....+..++.||+.||.|||+ .+++|+||+|+||+++.+|.+||+|||++.
T Consensus 94 -~~~~lv~e~~~~~l~~~l~~~~~~--l~~~~~~~~~~qi~~al~~LH~-~gi~H~dl~p~nili~~~~~~kL~dfg~~~ 169 (313)
T cd06633 94 -HTAWLVMEYCLGSASDLLEVHKKP--LQEVEIAAITHGALQGLAYLHS-HNMIHRDIKAGNILLTEPGQVKLADFGSAS 169 (313)
T ss_pred -CEEEEEEecCCCCHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCChhhEEECCCCCEEEeecCCCc
Confidence 3899999999 5677777654321 2344456679999999999995 899999999999999999999999999876
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----h-----c
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R-----N 248 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~-----~ 248 (778)
.....+ ...+...|+|||++...- ...++.++|+|||||++|+|++|.+|+..... . .
T Consensus 170 ~~~~~~----------~~~~~~~y~aPE~~~~~~---~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~ 236 (313)
T cd06633 170 KSSPAN----------SFVGTPYWMAPEVILAMD---EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQND 236 (313)
T ss_pred ccCCCC----------CccccccccChhhccccC---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC
Confidence 432211 112345799999974210 02456789999999999999999988643211 0 0
Q ss_pred -----cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -----~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++.+||+.+|.+||++.+++.|+
T Consensus 237 ~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~ 274 (313)
T cd06633 237 SPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHD 274 (313)
T ss_pred CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 123556788999999999999999999999997
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.4e-29 Score=265.22 Aligned_cols=242 Identities=15% Similarity=0.148 Sum_probs=184.9
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCC----------------CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCC
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDG----------------SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHP 79 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g----------------~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHP 79 (778)
...+|++.+++|.|+ | .||.|+....+ ..|++|.+..... ....+.+.+|++++++++||
T Consensus 3 ~~~~~~~~~~lg~G~~g--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~e~~~l~~l~~~ 79 (296)
T cd05051 3 PRQPLNFVEKLGEGQFG--EVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS-DNAREDFLKEVKILSRLSDP 79 (296)
T ss_pred chhhCcccccccCCCCc--cEEEEEeccCCcccccccccccccCCceeEEEEEecCccC-HHHHHHHHHHHHHHHhcCCC
Confidence 456799999999998 8 89998876543 5689999875433 24466788999999999999
Q ss_pred CeeeEeeeeEecccccCCcccEEEEEecCC--cChHHHHHHhCcC--------CCcchHHHHHHHHHHHHHHHHHHcCCC
Q 004025 80 NILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLE--------GSQRDEYYAWGLNQIAKAVSFLNNDCK 149 (778)
Q Consensus 80 nIlk~~d~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~--------~~~~~~~i~~gl~QI~~aL~fLH~~~~ 149 (778)
||+++++++..+ ..+|+++||+ ++|..++...... .......+..++.||+.||.|||+ .+
T Consensus 80 ~i~~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~-~~ 150 (296)
T cd05051 80 NIARLLGVCTVD--------PPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES-LN 150 (296)
T ss_pred CEeEEEEEEecC--------CCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHH-cC
Confidence 999999999864 3789999999 5799998765411 112334456679999999999995 89
Q ss_pred ccccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHH
Q 004025 150 LVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGC 229 (778)
Q Consensus 150 ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~ 229 (778)
++|+||||+||+++.++.+||+|||++.......... .......+..|+|||++.+. .++.++|+|||||
T Consensus 151 i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~ 220 (296)
T cd05051 151 FVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYR----VQGRAPLPIRWMAWESVLLG------KFTTKSDVWAFGV 220 (296)
T ss_pred ccccccchhceeecCCCceEEccccceeecccCccee----ecCcCCCCceecCHHHhhcC------CCCccchhhhhHH
Confidence 9999999999999999999999999987654321100 01111233479999998763 5678999999999
Q ss_pred HHHHHHh--CCCCCChh----hhhc----------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 230 LIYELFS--GMRLSKTE----ELRN----------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 230 liyel~t--g~~p~~~~----~l~~----------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
++|||++ +..|+... .+.. ...+|..+.+++.+||..+|.+||++.++++.
T Consensus 221 ~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~ 293 (296)
T cd05051 221 TLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLF 293 (296)
T ss_pred HHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHH
Confidence 9999998 44555321 1110 12346779999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.9e-29 Score=264.05 Aligned_cols=241 Identities=15% Similarity=0.196 Sum_probs=185.4
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEEC-----CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEe
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSK-----DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k-----~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~ 90 (778)
...+|.+.+++|.|+ | +||.+... .++..|++|.+.... ......+.+|++.++.++||||+++++++..
T Consensus 3 ~~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 78 (280)
T cd05092 3 KRRDIVLKWELGEGAFG--KVFLAECHNLLPEQDKMLVAVKALKEAS--ESARQDFQREAELLTVLQHQHIVRFYGVCTE 78 (280)
T ss_pred ChHhceeccccCCccCC--eEEEeEEecCCCCCCceEEEEEecCcCC--HHHHHHHHHHHHHHhcCCCCCCceEEEEEec
Confidence 345788999999998 8 89999743 356789999877532 3345678999999999999999999999876
Q ss_pred cccccCCcccEEEEEecCC--cChHHHHHHhCcC------------CCcchHHHHHHHHHHHHHHHHHHcCCCccccccC
Q 004025 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLE------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLk 156 (778)
. ...|++|||+ ++|.+++...... .......+..++.||+.||.|||+ .+++|||||
T Consensus 79 ~--------~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~-~~i~H~dlk 149 (280)
T cd05092 79 G--------RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLAS-LHFVHRDLA 149 (280)
T ss_pred C--------CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHH-CCeeccccc
Confidence 3 3789999999 5799998764321 112234466679999999999995 999999999
Q ss_pred CCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh
Q 004025 157 LSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS 236 (778)
Q Consensus 157 p~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t 236 (778)
|+||++++++.+||+|||++.......... .......+..|+|||++.+ ..++.++|+|||||++|||++
T Consensus 150 p~nil~~~~~~~kL~dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el~~ 219 (280)
T cd05092 150 TRNCLVGQGLVVKIGDFGMSRDIYSTDYYR----VGGRTMLPIRWMPPESILY------RKFTTESDIWSFGVVLWEIFT 219 (280)
T ss_pred HhhEEEcCCCCEEECCCCceeEcCCCceee----cCCCccccccccCHHHhcc------CCcCchhhHHHHHHHHHHHHc
Confidence 999999999999999999987654321100 0011122457999998876 356788999999999999998
Q ss_pred -CCCCCChhh----h---------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 237 -GMRLSKTEE----L---------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 237 -g~~p~~~~~----l---------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
|.+||.... . .....+|..+.+++.+||..+|.+||++.++++.
T Consensus 220 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~ 277 (280)
T cd05092 220 YGKQPWYQLSNTEAIECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSR 277 (280)
T ss_pred CCCCCCccCCHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 777773211 1 1123577889999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.1e-29 Score=260.95 Aligned_cols=237 Identities=17% Similarity=0.181 Sum_probs=184.1
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
+....|++.+++|.|+ | .||+|..+ +++.|+||.+...... .+.+.+|+.++++++||||+++++.+..
T Consensus 3 ~~~~~~~~~~~ig~G~~g--~v~~~~~~-~~~~~a~K~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~---- 72 (260)
T cd05067 3 VPRETLKLVKKLGAGQFG--EVWMGYYN-GHTKVAIKSLKQGSMS---PEAFLAEANLMKQLQHPRLVRLYAVVTQ---- 72 (260)
T ss_pred cchHHceeeeeeccCccc--eEEeeecC-CCceEEEEEecCCCCc---HHHHHHHHHHHHhcCCcCeeeEEEEEcc----
Confidence 4567899999999998 8 89999865 6788999998754332 3467889999999999999999988753
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+|++|||+ ++|.+++....... .....+..++.||+.||.|||+ .+++||||+|+||+++.++.++|+|
T Consensus 73 -----~~~~~v~e~~~~~~L~~~~~~~~~~~-~~~~~~~~i~~~i~~al~~LH~-~~i~H~dl~p~ni~i~~~~~~~l~d 145 (260)
T cd05067 73 -----EPIYIITEYMENGSLVDFLKTPEGIK-LTINKLIDMAAQIAEGMAFIER-KNYIHRDLRAANILVSETLCCKIAD 145 (260)
T ss_pred -----CCcEEEEEcCCCCCHHHHHHhcCCCC-CCHHHHHHHHHHHHHHHHHHhc-CCeecccccHHhEEEcCCCCEEEcc
Confidence 2689999999 57998887643221 2233355568999999999995 9999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR---- 247 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~---- 247 (778)
||++.......... ......+..|+|||++.+. .++.++|+|||||++||+++ |..||......
T Consensus 146 fg~~~~~~~~~~~~-----~~~~~~~~~y~~pe~~~~~------~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~ 214 (260)
T cd05067 146 FGLARLIEDNEYTA-----REGAKFPIKWTAPEAINYG------TFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQ 214 (260)
T ss_pred CcceeecCCCCccc-----ccCCcccccccCHHHhccC------CcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHH
Confidence 99987765321100 0111223479999998753 56678999999999999998 88887532110
Q ss_pred ---c------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 ---N------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 ---~------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. ...+|..+.+++.+||+.+|..||++++++..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 256 (260)
T cd05067 215 NLERGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSV 256 (260)
T ss_pred HHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 1 13456779999999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.5e-29 Score=264.67 Aligned_cols=243 Identities=17% Similarity=0.181 Sum_probs=188.3
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECC----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEec
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKD----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~----~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e 91 (778)
...+|++.+.+|.|+ | .||.|.++. .+..|++|.+... ........+.+|+.+++.|+||||+++++++..+
T Consensus 4 ~~~~~~~~~~i~~g~~g--~V~~~~~~~~~~~~~~~v~~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~ 80 (280)
T cd05043 4 SRDRVTLSDLLQEGTFG--RIFYGILIDEKPGKEEEVFVKTVKDH-ASEIQVTLLLQESCLLYGLSHQNILPILHVCIED 80 (280)
T ss_pred chhheEEeeeecccCCc--eEEEEEEecCCCCceeEEEEEEccCC-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence 456799999999998 8 899999876 2578999988643 3334567788999999999999999999987653
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcC-----CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLE-----GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ 164 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~-----~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~ 164 (778)
. ...|+++||+ ++|..++...... .......+..++.||+.||.|||+ .+++|+||+|+||+++.
T Consensus 81 ~-------~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~i~H~di~p~nil~~~ 152 (280)
T cd05043 81 G-------EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHK-RGVIHKDIAARNCVIDE 152 (280)
T ss_pred C-------CCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHH-CCEeecccCHhhEEEcC
Confidence 2 3689999998 5799998765322 223344466679999999999995 99999999999999999
Q ss_pred CCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCh
Q 004025 165 TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKT 243 (778)
Q Consensus 165 ~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~ 243 (778)
++.+||+|||+++.+....... ..........|+|||++.+ ..++.++|+|||||++||+++ |..||..
T Consensus 153 ~~~~kl~d~g~~~~~~~~~~~~----~~~~~~~~~~y~apE~~~~------~~~~~~~Di~slG~~l~el~~~g~~p~~~ 222 (280)
T cd05043 153 ELQVKITDNALSRDLFPMDYHC----LGDNENRPVKWMALESLVN------KEYSSASDVWSFGVLLWELMTLGQTPYVE 222 (280)
T ss_pred CCcEEECCCCCcccccCCceEE----eCCCCCcchhccCHHHHhc------CCCCchhhHHHhHHHHHHHhcCCCCCcCc
Confidence 9999999999987664321100 0011122347999999875 356789999999999999998 8888753
Q ss_pred hhh-------------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 244 EEL-------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 244 ~~l-------------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
... .....+|..+.+++.+|+..+|.+||++.++++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~ 272 (280)
T cd05043 223 IDPFEMAAYLKDGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQC 272 (280)
T ss_pred CCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 211 1113457789999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.7e-29 Score=272.21 Aligned_cols=245 Identities=16% Similarity=0.196 Sum_probs=185.8
Q ss_pred CCCce-eccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchh------------HHHHHHHHHHHHhcCCCCCeee
Q 004025 18 DLPYN-IGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDG------------HLAAARNGVKRLRTVRHPNILA 83 (778)
Q Consensus 18 ~~~Y~-i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~------------~~~~~~~ev~~Lk~LrHPnIlk 83 (778)
..+|. +.+.||.|+ | +||+|.++.+++.|+||++........ ....+.+|++++++++||||++
T Consensus 7 ~~ry~~~~~~ig~G~~g--~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 84 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYG--KVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMG 84 (335)
T ss_pred ccchhhhhhcccCCCce--eEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceee
Confidence 34675 457799987 7 899999999999999999875432210 1124678999999999999999
Q ss_pred EeeeeEecccccCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEE
Q 004025 84 FLHSTEVENIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV 162 (778)
Q Consensus 84 ~~d~~e~e~~~g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v 162 (778)
+++++..+ ..+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||+|+||++
T Consensus 85 ~~~~~~~~--------~~~~lv~e~~~~~l~~~l~~~~~---~~~~~~~~~~~ql~~aL~~LH~-~~i~H~dl~~~nill 152 (335)
T PTZ00024 85 LVDVYVEG--------DFINLVMDIMASDLKKVVDRKIR---LTESQVKCILLQILNGLNVLHK-WYFMHRDLSPANIFI 152 (335)
T ss_pred eeEEEecC--------CcEEEEEeccccCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeecccccHHHeEE
Confidence 99999864 3899999999 678888865432 2334456679999999999995 999999999999999
Q ss_pred cCCCcEEEEecccccccCCCCCCCC--------CCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHH
Q 004025 163 TQTLDWKLHAFDVLSEFDGNNEAAN--------GPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYEL 234 (778)
Q Consensus 163 ~~~g~~KL~dFgla~~~~~~~~~~~--------~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel 234 (778)
+.+|.+||+|||++........... .............|+|||.+.+. ..++.++|+|||||++|+|
T Consensus 153 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~~l~el 227 (335)
T PTZ00024 153 NSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGA-----EKYHFAVDMWSVGCIFAEL 227 (335)
T ss_pred CCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccC-----CCCCcHHHHHHHHHHHHHH
Confidence 9999999999999887652211000 00000111234479999998653 2457789999999999999
Q ss_pred HhCCCCCChhh----hh------------------------------------ccCCCCcchHHHHHHHhccCCCCCCCh
Q 004025 235 FSGMRLSKTEE----LR------------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNS 274 (778)
Q Consensus 235 ~tg~~p~~~~~----l~------------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~ 274 (778)
++|.++|.... +. .....+..+.+++++||..+|..||++
T Consensus 228 ~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~ 307 (335)
T PTZ00024 228 LTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISA 307 (335)
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCH
Confidence 99998875321 00 001235567889999999999999999
Q ss_pred HHHHhcc
Q 004025 275 SKLIENS 281 (778)
Q Consensus 275 ~~lL~~~ 281 (778)
++++.|+
T Consensus 308 ~~~l~~~ 314 (335)
T PTZ00024 308 KEALKHE 314 (335)
T ss_pred HHHhcCc
Confidence 9999998
|
|
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.4e-29 Score=259.19 Aligned_cols=232 Identities=18% Similarity=0.265 Sum_probs=185.1
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|++.+.+|.|. | .||+|... |+.|+||.+..... ..+.+.+|+.+++.++||||+++++.+..+
T Consensus 4 ~~~~~~~~~~ig~g~~g--~v~~~~~~--~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---- 72 (256)
T cd05039 4 NSKELKLGATIGKGEFG--DVMLGDYR--GQKVAVKCLKDDST---AAQAFLAEASVMTTLRHPNLVQLLGVVLQG---- 72 (256)
T ss_pred ChhhccceeeeecCCCc--eEEEEEec--CcEEEEEEeccchh---HHHHHHHHHHHHHhcCCcceeeeEEEEcCC----
Confidence 345799999999998 8 89999875 89999999976432 456788999999999999999999998863
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
...|+||||+ ++|.++++..... ......+..++.|++.||.|||+ .+++|+||+|+||+++.+|.+||+||
T Consensus 73 ----~~~~~v~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lh~-~~i~H~di~p~Nili~~~~~~~l~d~ 146 (256)
T cd05039 73 ----NPLYIVTEYMAKGSLVDYLRSRGRA-VITLAQQLGFALDVCEGMEYLEE-KNFVHRDLAARNVLVSEDLVAKVSDF 146 (256)
T ss_pred ----CCeEEEEEecCCCcHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHh-CCccchhcccceEEEeCCCCEEEccc
Confidence 3789999999 4799998765421 12344466669999999999995 99999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhhc----
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELRN---- 248 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~~---- 248 (778)
|++........ ....+..|++||.+.++ .++.++|+|||||++|++++ |..||.......
T Consensus 147 g~~~~~~~~~~---------~~~~~~~~~ape~~~~~------~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~ 211 (256)
T cd05039 147 GLAKEASQGQD---------SGKLPVKWTAPEALREK------KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPH 211 (256)
T ss_pred ccccccccccc---------cCCCcccccCchhhcCC------cCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 99987643211 11223479999988653 45678999999999999997 877764322111
Q ss_pred ---------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 249 ---------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 249 ---------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
...+|..+.+++.+||..+|.+||++.++++.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 252 (256)
T cd05039 212 VEKGYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQ 252 (256)
T ss_pred HhcCCCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence 13467789999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.5e-29 Score=266.40 Aligned_cols=245 Identities=15% Similarity=0.128 Sum_probs=185.5
Q ss_pred CCCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecc
Q 004025 15 GVKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVEN 92 (778)
Q Consensus 15 ~~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~ 92 (778)
.+...+|++.+.+|.|. | +||+|+++.+++.|+||.+....... ....+..|+..+..+. ||||+++++.+.++
T Consensus 11 ~~~~~~~~~~~~lg~g~~~--~v~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~- 86 (296)
T cd06618 11 PADLNDLENLGEIGSGTCG--QVYKMRFKKTGHVMAVKQMRRTGNKE-ENKRILMDLDVVLKSHDCPYIVKCYGYFITD- 86 (296)
T ss_pred cCCcchheeeeEeeccCCe--EEEEEEECCCCeEEEEEEEeccCChH-HHHHHHHHHHHHHhccCCCchHhhheeeecC-
Confidence 34556799999999997 7 99999999999999999998653333 2344555666665654 99999999999864
Q ss_pred cccCCcccEEEEEecCCc-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 93 IDATSTKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
..+|+||||++ .|..++..... ......+..++.||+.||.|||+..+++||||+|+||+++.++.+||+
T Consensus 87 -------~~~~~v~e~~~~~l~~l~~~~~~--~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~ 157 (296)
T cd06618 87 -------SDVFICMELMSTCLDKLLKRIQG--PIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLC 157 (296)
T ss_pred -------CeEEEEeeccCcCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEEC
Confidence 38999999995 45555544321 223344556699999999999964699999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh-----hh
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-----EL 246 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~-----~l 246 (778)
|||++..+..... .........|++||.+.+.-. ...++.++|+|||||++|+|++|..||... .+
T Consensus 158 dfg~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~--~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~ 228 (296)
T cd06618 158 DFGISGRLVDSKA-------KTRSAGCAAYMAPERIDPPDP--NPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVL 228 (296)
T ss_pred ccccchhccCCCc-------ccCCCCCccccCHhhcCCCCC--ccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHH
Confidence 9999876643211 111123457999999865210 123567899999999999999999888541 11
Q ss_pred hc-----------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 RN-----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ~~-----------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. ...++..+.+++.+||+.+|..||++.++++|+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~ 274 (296)
T cd06618 229 TKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHP 274 (296)
T ss_pred HHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence 10 013566789999999999999999999999997
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.1e-29 Score=268.71 Aligned_cols=242 Identities=16% Similarity=0.232 Sum_probs=183.5
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEEC-------CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeee
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSK-------DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHS 87 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k-------~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~ 87 (778)
+..+|.+++.+|.|+ | .||.|+.. ..+..|++|.+..... ......+.+|+++++.+ +||||++++++
T Consensus 10 ~~~~~~~~~~lg~G~~g--~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 86 (314)
T cd05099 10 PRDRLVLGKPLGEGCFG--QVVRAEAYGIDKSRPDQTVTVAVKMLKDNAT-DKDLADLISEMELMKLIGKHKNIINLLGV 86 (314)
T ss_pred cHHHeeeeeeecCCCcc--cEEEeeecccCCccCCcceEEEEEecCCCCC-hHHHHHHHHHHHHHHhccCCCCeeeEEEE
Confidence 445799999999998 8 89999763 2345799999875433 33456688999999999 69999999999
Q ss_pred eEecccccCCcccEEEEEecCC--cChHHHHHHhCcC-------------CCcchHHHHHHHHHHHHHHHHHHcCCCccc
Q 004025 88 TEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVH 152 (778)
Q Consensus 88 ~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~-------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH 152 (778)
+..+ ..+|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++|
T Consensus 87 ~~~~--------~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~-~gi~H 157 (314)
T cd05099 87 CTQE--------GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES-RRCIH 157 (314)
T ss_pred EccC--------CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH-CCeee
Confidence 8763 3799999999 5899999764311 112223345568999999999995 99999
Q ss_pred cccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHH
Q 004025 153 GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIY 232 (778)
Q Consensus 153 ~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liy 232 (778)
|||||+||+++.+|.+||+|||+++.......... ......+..|+|||++.+ ..++.++|+|||||++|
T Consensus 158 ~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~------~~~~~~~DiwslG~~l~ 227 (314)
T cd05099 158 RDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKK----TSNGRLPVKWMAPEALFD------RVYTHQSDVWSFGILMW 227 (314)
T ss_pred ccccceeEEEcCCCcEEEccccccccccccccccc----cccCCCCccccCHHHHcc------CCcCccchhhHHHHHHH
Confidence 99999999999999999999999987653211000 011112247999999876 35678999999999999
Q ss_pred HHHh-CCCCCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 233 ELFS-GMRLSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 233 el~t-g~~p~~~~~l~-------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
+|++ |..||...... ....+|..+.+++.+||+.+|..||++.++++.
T Consensus 228 el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 289 (314)
T cd05099 228 EIFTLGGSPYPGIPVEELFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEA 289 (314)
T ss_pred HHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 9998 66666432110 113456678899999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.7e-29 Score=266.19 Aligned_cols=242 Identities=14% Similarity=0.159 Sum_probs=182.6
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCC--------------CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCe
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDG--------------SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNI 81 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g--------------~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnI 81 (778)
+..+|++.++||.|+ | .||.+++...+ ..|+||.+.... .......+.+|+++|++++||||
T Consensus 3 ~~~~~~~~~~lg~G~~g--~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i 79 (295)
T cd05097 3 PRQQLRLKEKLGEGQFG--EVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV-TKTARNDFLKEIKIMSRLKNPNI 79 (295)
T ss_pred chHhCeehhccCCCCCc--eEEecccccchhhccccCcccCCCceEEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCc
Confidence 456799999999999 8 89998875432 248999987542 23345578899999999999999
Q ss_pred eeEeeeeEecccccCCcccEEEEEecCC--cChHHHHHHhCcCC---------CcchHHHHHHHHHHHHHHHHHHcCCCc
Q 004025 82 LAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEG---------SQRDEYYAWGLNQIAKAVSFLNNDCKL 150 (778)
Q Consensus 82 lk~~d~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~---------~~~~~~i~~gl~QI~~aL~fLH~~~~i 150 (778)
+++++++... ..+|+||||+ ++|.+++....... ......+..++.||+.||.|||+ .++
T Consensus 80 ~~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~-~~i 150 (295)
T cd05097 80 IRLLGVCVSD--------DPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLAS-LNF 150 (295)
T ss_pred CeEEEEEcCC--------CccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHh-cCe
Confidence 9999999763 3789999999 47988886543110 12234456679999999999995 899
Q ss_pred cccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHH
Q 004025 151 VHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCL 230 (778)
Q Consensus 151 vH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~l 230 (778)
+||||||+||+++.++.+||+|||++......... ........+..|+|||+..++ .++.++|+|||||+
T Consensus 151 ~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~------~~~~~~DvwSlG~~ 220 (295)
T cd05097 151 VHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYY----RIQGRAVLPIRWMAWESILLG------KFTTASDVWAFGVT 220 (295)
T ss_pred eccccChhhEEEcCCCcEEecccccccccccCcce----eccCcCcCceeecChhhhccC------CcCchhhHHHHHHH
Confidence 99999999999999999999999998765432110 000011223479999988753 46789999999999
Q ss_pred HHHHHh--CCCCCChh---h-hh----------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 231 IYELFS--GMRLSKTE---E-LR----------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 231 iyel~t--g~~p~~~~---~-l~----------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
+|+|++ +..+|... + +. ....+|..+.+++.+|+..+|.+||++.++++.
T Consensus 221 l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~ 292 (295)
T cd05097 221 LWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHF 292 (295)
T ss_pred HHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 999998 44555321 1 00 012356779999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-28 Score=265.73 Aligned_cols=237 Identities=15% Similarity=0.137 Sum_probs=186.6
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
.-|++.+.+|.|+ | .||+|+++.+|..|+||.+..... .......+.+|+++++.++||||+++++++..+
T Consensus 25 ~~f~~~~~lg~G~~~--~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----- 97 (317)
T cd06635 25 KLFTDLREIGHGSFG--AVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLRE----- 97 (317)
T ss_pred hhhhhhheeccCCCe--EEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeC-----
Confidence 3488888999997 7 899999999999999999875432 224456788999999999999999999999864
Q ss_pred CcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 97 ~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
...||||||+ ++|.+.+...... .....+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||+
T Consensus 98 ---~~~~lv~e~~~g~l~~~~~~~~~~--l~~~~~~~i~~~i~~~l~~lH~-~~i~H~dL~p~Nil~~~~~~~kl~dfg~ 171 (317)
T cd06635 98 ---HTAWLVMEYCLGSASDLLEVHKKP--LQEVEIAAITHGALQGLAYLHS-HNMIHRDIKAGNILLTEPGQVKLADFGS 171 (317)
T ss_pred ---CeEEEEEeCCCCCHHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCcccEEECCCCCEEEecCCC
Confidence 3789999999 5677776543321 2344566679999999999995 8999999999999999999999999998
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----hc---
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN--- 248 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~~--- 248 (778)
+....... ...+...|++||++...- ....+.++|+|||||++|||++|..||..... ..
T Consensus 172 ~~~~~~~~----------~~~~~~~y~aPE~~~~~~---~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~ 238 (317)
T cd06635 172 ASIASPAN----------SFVGTPYWMAPEVILAMD---EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ 238 (317)
T ss_pred ccccCCcc----------cccCCccccChhhhhcCC---CCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHh
Confidence 86543311 112345799999974210 02456789999999999999999987643211 00
Q ss_pred -------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++.+||+.+|..||++.++++|+
T Consensus 239 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 278 (317)
T cd06635 239 NESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHM 278 (317)
T ss_pred ccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence 123456688999999999999999999999997
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.4e-29 Score=261.00 Aligned_cols=235 Identities=17% Similarity=0.172 Sum_probs=180.8
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|++.++||.|+ | .||+|..+.+ ..|+||.+..... ..+.+.+|+++++.++||||+++++.+..
T Consensus 4 ~~~~~~~~~~ig~g~~~--~v~~~~~~~~-~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----- 72 (260)
T cd05069 4 PRESLRLDVKLGQGCFG--EVWMGTWNGT-TKVAIKTLKPGTM---MPEAFLQEAQIMKKLRHDKLVPLYAVVSE----- 72 (260)
T ss_pred ChHHeeeeeeecCcCCC--eEEEEEEcCC-ceEEEEEcccCCc---cHHHHHHHHHHHHhCCCCCeeeEEEEEcC-----
Confidence 445799999999998 8 8999987654 4699998764322 23567889999999999999999988753
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
...|+||||+ ++|.+++...... ......+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+||
T Consensus 73 ----~~~~~v~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~l~~al~~lH~-~~i~H~dl~~~Nill~~~~~~~l~df 146 (260)
T cd05069 73 ----EPIYIVTEFMGKGSLLDFLKEGDGK-YLKLPQLVDMAAQIADGMAYIER-MNYIHRDLRAANILVGDNLVCKIADF 146 (260)
T ss_pred ----CCcEEEEEcCCCCCHHHHHhhCCCC-CCCHHHHHHHHHHHHHHHHHHHh-CCEeecccCcceEEEcCCCeEEECCC
Confidence 2579999999 4799998764321 12334455668999999999995 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL------ 246 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l------ 246 (778)
|++......... .......+..|++||...+ ..++.++|+|||||++|||++ |..||.....
T Consensus 147 g~~~~~~~~~~~-----~~~~~~~~~~y~~Pe~~~~------~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~ 215 (260)
T cd05069 147 GLARLIEDNEYT-----ARQGAKFPIKWTAPEAALY------GRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQ 215 (260)
T ss_pred ccceEccCCccc-----ccCCCccchhhCCHHHhcc------CCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 999776432110 0111123347999998765 356778999999999999999 7777743211
Q ss_pred -hc------cCCCCcchHHHHHHHhccCCCCCCChHHHHh
Q 004025 247 -RN------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 247 -~~------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
.. ...+|..+.+++++||..+|.+||+++++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 216 VERGYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred HHcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 11 1235677899999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=257.47 Aligned_cols=235 Identities=17% Similarity=0.239 Sum_probs=185.4
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCC----CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDG----SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g----~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
+++.+.+|.|+ | .||.|+++..+ ..|++|++...... .....+.+|+..++.++||||+++++.+.+.
T Consensus 1 ~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---- 73 (258)
T smart00219 1 LTLGKKLGEGAFG--EVYKGTLKGLSGEKEVEVAVKTLKEDADE-QQIEEFLREARIMRKLDHPNIVKLLGVCTEE---- 73 (258)
T ss_pred CcccceeccCCCc--ceEEEEecCCCCCCCceEEEEEccCCCCh-HHHHHHHHHHHHHHhcCCCchheEEEEEcCC----
Confidence 46788899988 8 89999998766 89999999654322 2566889999999999999999999999874
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
...|++|||+ ++|.+++....... .....+..++.||+.||.|||+ .+++|+||+|+||+++.+|.+||+||
T Consensus 74 ----~~~~~i~e~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~ql~~~l~~lh~-~~~~h~dl~~~nil~~~~~~~~l~df 147 (258)
T smart00219 74 ----EPLMIVMEYMEGGDLLDYLRKNRPKE-LSLSDLLSFALQIARGMEYLES-KNFIHRDLAARNCLVGENLVVKISDF 147 (258)
T ss_pred ----CeeEEEEeccCCCCHHHHHHhhhhcc-CCHHHHHHHHHHHHHHHHHHhc-CCeeecccccceEEEccCCeEEEccc
Confidence 3899999999 57998887644211 2344566779999999999995 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh-----
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR----- 247 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~----- 247 (778)
|++.......... .....++..|++||.+.+ ..++.++|+|+|||++|+|++ |.+|+......
T Consensus 148 g~~~~~~~~~~~~-----~~~~~~~~~y~~Pe~~~~------~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~ 216 (258)
T smart00219 148 GLSRDLYDDDYYK-----KKGGKLPIRWMAPESLKD------GKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEY 216 (258)
T ss_pred CCceecccccccc-----cccCCCcccccChHHhcc------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 9988775431111 001123458999998855 356789999999999999998 66776532111
Q ss_pred --------ccCCCCcchHHHHHHHhccCCCCCCChHHHHh
Q 004025 248 --------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 248 --------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
....+|..+.+++.+||+.+|.+||++.++++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 217 LKKGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred HhcCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 11346778899999999999999999999885
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.6e-30 Score=279.34 Aligned_cols=236 Identities=15% Similarity=0.153 Sum_probs=189.9
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
-|.-.+.||.|+ | .||-+++..+++.||||++..+... ......+..||+.|++|+|||+|.|-++|-.+.
T Consensus 27 lf~dLrEIGHGSFG--AVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~----- 99 (948)
T KOG0577|consen 27 LFSDLREIGHGSFG--AVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREH----- 99 (948)
T ss_pred HHHHHHHhcCCccc--eeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccc-----
Confidence 366678899999 8 8999999999999999998864322 234566889999999999999999999998754
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
+.++||||| |+-.++|.-.... ..+..|+.++++.+.||.|||+ .+.||||||..||++++.|.+||+|||.+
T Consensus 100 ---TaWLVMEYClGSAsDlleVhkKp--lqEvEIAAi~~gaL~gLaYLHS-~~~IHRDiKAGNILLse~g~VKLaDFGSA 173 (948)
T KOG0577|consen 100 ---TAWLVMEYCLGSASDLLEVHKKP--LQEVEIAAITHGALQGLAYLHS-HNRIHRDIKAGNILLSEPGLVKLADFGSA 173 (948)
T ss_pred ---hHHHHHHHHhccHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHHH-hhHHhhhccccceEecCCCeeeeccccch
Confidence 789999999 7777776654322 1233477789999999999997 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCC-CChhhhhcc------
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL-SKTEELRNT------ 249 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p-~~~~~l~~~------ 249 (778)
+..... ..+++++.|||||++...- ...|+-++||||||+.+.|+...+|| |+.+...-+
T Consensus 174 si~~PA----------nsFvGTPywMAPEVILAMD---EGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQN 240 (948)
T KOG0577|consen 174 SIMAPA----------NSFVGTPYWMAPEVILAMD---EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN 240 (948)
T ss_pred hhcCch----------hcccCCccccchhHheecc---ccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhc
Confidence 887653 2346677899999987421 13577899999999999999998865 443322211
Q ss_pred --C-----CCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 250 --A-----SIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 250 --~-----~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. .....+..++..||..-|..||+.+++|.|+
T Consensus 241 esPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~ 279 (948)
T KOG0577|consen 241 ESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHR 279 (948)
T ss_pred CCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcc
Confidence 1 1233477888999999999999999999997
|
|
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=262.52 Aligned_cols=239 Identities=17% Similarity=0.160 Sum_probs=183.4
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCc----EEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEec
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSP----VSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~----VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e 91 (778)
....|++.+.||.|+ | +||+|+++.+|+. |+||++..... ......+.+|+.+++.+.||||+++++.+...
T Consensus 5 ~~~~~~~~~~lg~G~~g--~vy~~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~ 81 (279)
T cd05109 5 KETELKKVKVLGSGAFG--TVYKGIWIPDGENVKIPVAIKVLRENTS-PKANKEILDEAYVMAGVGSPYVCRLLGICLTS 81 (279)
T ss_pred chhheeeeeecCCCCCc--eEEEEEEecCCCccceEEEEEEecCCCC-HHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC
Confidence 445799999999998 8 9999998877764 89999875432 33456788999999999999999999988642
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEE
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~K 169 (778)
..++++||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.++.+|
T Consensus 82 ---------~~~l~~~~~~~g~l~~~l~~~~~--~~~~~~~~~~~~qi~~~L~~lH~-~~iiH~dlkp~Nil~~~~~~~k 149 (279)
T cd05109 82 ---------TVQLVTQLMPYGCLLDYVRENKD--RIGSQDLLNWCVQIAKGMSYLEE-VRLVHRDLAARNVLVKSPNHVK 149 (279)
T ss_pred ---------CcEEEEEcCCCCCHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHH-CCeeccccccceEEEcCCCcEE
Confidence 578999998 689888876431 11233345558899999999995 8999999999999999999999
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh--
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL-- 246 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l-- 246 (778)
|+|||+++........ ........+..|++||...+ ..++.++|+|||||++|||++ |..|+.....
T Consensus 150 L~dfG~~~~~~~~~~~----~~~~~~~~~~~y~~PE~~~~------~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~ 219 (279)
T cd05109 150 ITDFGLARLLDIDETE----YHADGGKVPIKWMALESILH------RRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE 219 (279)
T ss_pred ECCCCceeecccccce----eecCCCccchhhCCHHHhcc------CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 9999999876532110 00111122347999999865 356789999999999999998 7777753211
Q ss_pred -----hc------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 247 -----RN------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 247 -----~~------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
.. ...++..+..++.+||..||..||++.++++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~ 264 (279)
T cd05109 220 IPDLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDE 264 (279)
T ss_pred HHHHHHCCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 11 12345678889999999999999999998854
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.6e-29 Score=263.57 Aligned_cols=236 Identities=18% Similarity=0.242 Sum_probs=184.9
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecccccCCc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~g~~~ 98 (778)
|++.+.||.|+ | +||+|+.+.+++.|+||.+....... ......+|+..++.++ ||||+++++.++.+
T Consensus 1 y~~~~~ig~g~~g--~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~------- 70 (283)
T cd07830 1 YKVIKQLGDGTFG--SVYLARNKETGELVAIKKMKKKFYSW-EECMNLREVKSLRKLNEHPNIVKLKEVFREN------- 70 (283)
T ss_pred CeeheeeccCCce--EEEEEEECCCCcEEEEEEehhhccch-hHHHHHHHHHHHHhccCCCCchhHHHHhhcC-------
Confidence 78899999998 8 89999999999999999987653322 1223457899999999 99999999999873
Q ss_pred ccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 99 ~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
...|+||||+ ++|.+++..... .......+..++.||+.+|.|||+ ++++|+||+|+||+++.++.+||+|||++.
T Consensus 71 -~~~~lv~e~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~-~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~ 147 (283)
T cd07830 71 -DELYFVFEYMEGNLYQLMKDRKG-KPFSESVIRSIIYQILQGLAHIHK-HGFFHRDLKPENLLVSGPEVVKIADFGLAR 147 (283)
T ss_pred -CcEEEEEecCCCCHHHHHHhccc-ccCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCChhhEEEcCCCCEEEeecccce
Confidence 3899999999 568888876541 112344566679999999999995 999999999999999999999999999988
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hhc-----
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRN----- 248 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~~----- 248 (778)
....... .........|+|||++.+. ..++.++|+||||+++|||++|.++|.... +..
T Consensus 148 ~~~~~~~-------~~~~~~~~~~~aPE~~~~~-----~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~ 215 (283)
T cd07830 148 EIRSRPP-------YTDYVSTRWYRAPEILLRS-----TSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVL 215 (283)
T ss_pred eccCCCC-------cCCCCCcccccCceeeecC-----cCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhc
Confidence 6654211 0112334579999987643 346779999999999999999998774221 000
Q ss_pred ---------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ---------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ---------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+..+..++++||..+|.+||++.+++.|+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~ 281 (283)
T cd07830 216 GTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHP 281 (283)
T ss_pred CCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCC
Confidence 012245678889999999999999999999997
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.2e-29 Score=261.31 Aligned_cols=239 Identities=17% Similarity=0.186 Sum_probs=184.0
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCC---cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGS---PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~---~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
.+|++++.+|.|. | .||.|+++.++. .|+||.+.... .+...+.+.+|+..+++++||||+++++++..+
T Consensus 4 ~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 77 (267)
T cd05066 4 SCIKIEKVIGAGEFG--EVCSGRLKLPGKREIPVAIKTLKAGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKS--- 77 (267)
T ss_pred HHeEeeeeecccCCC--ceEEEEEecCCCCceEEEEEECCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecC---
Confidence 4699999999998 8 899999875554 79999987543 233456789999999999999999999998753
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|
T Consensus 78 -----~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~-~~i~h~dlkp~nili~~~~~~~l~d 149 (267)
T cd05066 78 -----KPVMIVTEYMENGSLDAFLRKHDG--QFTVIQLVGMLRGIASGMKYLSD-MGYVHRDLAARNILVNSNLVCKVSD 149 (267)
T ss_pred -----CccEEEEEcCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH-CCEeehhhchhcEEECCCCeEEeCC
Confidence 3799999999 479998876532 12233345568999999999995 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhh----h-
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE----L- 246 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~----l- 246 (778)
||++..+...... .........+..|++||.+.+ ..++.++|+|||||++||+++ |..||.... .
T Consensus 150 fg~~~~~~~~~~~---~~~~~~~~~~~~y~~pe~~~~------~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~ 220 (267)
T cd05066 150 FGLSRVLEDDPEA---AYTTRGGKIPIRWTAPEAIAY------RKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIK 220 (267)
T ss_pred CCcccccccccce---eeecCCCccceeecCHhHhcc------CccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHH
Confidence 9999876542211 000111112247999999876 356779999999999999886 887764211 1
Q ss_pred --h------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 247 --R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 247 --~------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. ....+|..+.+++.+|++.+|..||++.++++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 262 (267)
T cd05066 221 AIEEGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSI 262 (267)
T ss_pred HHhCCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHH
Confidence 1 112456788999999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=263.22 Aligned_cols=233 Identities=20% Similarity=0.225 Sum_probs=185.3
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
.|.-.+.||.|. | .||+|.++.+++.|+||.+..... ...+.+.+|+.+++.++||||+++++.+...
T Consensus 20 ~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~------- 88 (285)
T cd06648 20 YLDNFVKIGEGSTG--IVCIATDKSTGRQVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHPNIVEMYSSYLVG------- 88 (285)
T ss_pred hhhcceEeccCCCe--EEEEEEECCCCCEEEEEEEeccch--hHHHHHHHHHHHHHHcCCCChheEEEEEEcC-------
Confidence 455556788887 7 899999999999999999875322 2345688999999999999999999998763
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
.+.|+|+||+ ++|.+++.... .....+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++
T Consensus 89 -~~~~~v~e~~~~~~L~~~~~~~~----~~~~~~~~~~~ql~~~l~~lH~-~~i~H~dl~p~Nil~~~~~~~~l~d~g~~ 162 (285)
T cd06648 89 -DELWVVMEFLEGGALTDIVTHTR----MNEEQIATVCLAVLKALSFLHA-QGVIHRDIKSDSILLTSDGRVKLSDFGFC 162 (285)
T ss_pred -CeEEEEEeccCCCCHHHHHHhCC----CCHHHHHHHHHHHHHHHHHHHh-CCeecCCCChhhEEEcCCCcEEEcccccc
Confidence 3899999999 47988887632 2234456669999999999995 89999999999999999999999999988
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-------h--
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------R-- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l-------~-- 247 (778)
......... .....+...|++||...+ ..++.++|+|||||++|+|++|..||...+. .
T Consensus 163 ~~~~~~~~~------~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~ 230 (285)
T cd06648 163 AQVSKEVPR------RKSLVGTPYWMAPEVISR------LPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDN 230 (285)
T ss_pred hhhccCCcc------cccccCCccccCHHHhcC------CCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhc
Confidence 765432110 111234458999999865 3467789999999999999999988743211 0
Q ss_pred ------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|..+.+++++||..+|.+||++.++++|+
T Consensus 231 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 270 (285)
T cd06648 231 LPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHP 270 (285)
T ss_pred CCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHccCc
Confidence 1123567789999999999999999999999997
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.4e-29 Score=259.99 Aligned_cols=235 Identities=16% Similarity=0.167 Sum_probs=182.0
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|++.+++|.|+ | .||.|..+ ++..|++|.+...... .+.+.+|+.++++++||||+++++.+..
T Consensus 4 ~~~~~~~~~~ig~g~~~--~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~~----- 72 (260)
T cd05070 4 PRESLQLIKKLGNGQFG--EVWMGTWN-GNTKVAVKTLKPGTMS---PESFLEEAQIMKKLRHDKLVQLYAVVSE----- 72 (260)
T ss_pred chHHhhhhheeccccCc--eEEEEEec-CCceeEEEEecCCCCC---HHHHHHHHHHHHhcCCCceEEEEeEECC-----
Confidence 455799999999998 8 89999876 5677999998754332 3468899999999999999999998753
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..+|++|||+ ++|.+++...... ......+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+||
T Consensus 73 ----~~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~l~~al~~lH~-~~i~H~di~p~Nili~~~~~~~l~df 146 (260)
T cd05070 73 ----EPIYIVTEYMSKGSLLDFLKDGEGR-ALKLPNLVDMAAQVAAGMAYIER-MNYIHRDLRSANILVGDGLVCKIADF 146 (260)
T ss_pred ----CCcEEEEEecCCCcHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCccceEEEeCCceEEeCCc
Confidence 2579999999 4799988764321 12334456669999999999995 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh----hc
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL----RN 248 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l----~~ 248 (778)
|++..+...... ......++..|+|||++.+ ..++.++|+|||||++|+|++ |.+||..... ..
T Consensus 147 g~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~ 215 (260)
T cd05070 147 GLARLIEDNEYT-----ARQGAKFPIKWTAPEAALY------GRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQ 215 (260)
T ss_pred eeeeeccCcccc-----cccCCCCCccccChHHHhc------CCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 999876442110 0111123347999998765 356779999999999999999 7777743211 11
Q ss_pred ---------cCCCCcchHHHHHHHhccCCCCCCChHHHHh
Q 004025 249 ---------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 249 ---------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
....|..+.+++.+|+..+|.+||++.++.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 216 VERGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred HHcCCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 1235667889999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-29 Score=268.60 Aligned_cols=234 Identities=18% Similarity=0.209 Sum_probs=185.4
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..|.....||.|+ | .||.+.+..++..|+||.+.... ....+.+.+|+..++.++||||+++++.+...
T Consensus 22 ~~~~~~~~lg~g~~g--~v~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~------ 91 (292)
T cd06658 22 EYLDSFIKIGEGSTG--IVCIATEKHTGKQVAVKKMDLRK--QQRRELLFNEVVIMRDYHHENVVDMYNSYLVG------ 91 (292)
T ss_pred HHHhhhhcccCCCCe--EEEEEEECCCCCEEEEEEEecch--HHHHHHHHHHHHHHHhCCCCcHHHHHHheecC------
Confidence 3466677888887 7 89999999999999999987532 23456688999999999999999999998863
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
.+.|+||||+ ++|.+++..... ....+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+|||+
T Consensus 92 --~~~~lv~e~~~~~~L~~~~~~~~l----~~~~~~~~~~qi~~~l~~LH~-~~ivH~dlkp~Nill~~~~~~kL~dfg~ 164 (292)
T cd06658 92 --DELWVVMEFLEGGALTDIVTHTRM----NEEQIATVCLSVLRALSYLHN-QGVIHRDIKSDSILLTSDGRIKLSDFGF 164 (292)
T ss_pred --CeEEEEEeCCCCCcHHHHHhcCCC----CHHHHHHHHHHHHHHHHHHHH-CCEeecCCCHHHEEEcCCCCEEEccCcc
Confidence 4899999999 368887754332 234466779999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----hc---
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN--- 248 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~~--- 248 (778)
+......... .....++..|+|||+..+ ..++.++|+|||||++|||++|..||..... ..
T Consensus 165 ~~~~~~~~~~------~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~ 232 (292)
T cd06658 165 CAQVSKEVPK------RKSLVGTPYWMAPEVISR------LPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRD 232 (292)
T ss_pred hhhccccccc------CceeecCccccCHHHHcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence 8765432110 011234458999999865 3566789999999999999999988753211 10
Q ss_pred --------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 --------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 --------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+..++.+|+..+|.+||++.++++|+
T Consensus 233 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~ 273 (292)
T cd06658 233 NLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHP 273 (292)
T ss_pred cCCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhCh
Confidence 113455678889999999999999999999997
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=261.35 Aligned_cols=230 Identities=13% Similarity=0.176 Sum_probs=176.1
Q ss_pred CCCCCC-CceEEEEeEECCCCCc--EEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecccccCCcccE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSP--VSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDATSTKIT 101 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~--VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~g~~~~~~ 101 (778)
.+|.|+ | .||+|+.+.++.. +++|.+.... .....+.+.+|++.++++ +||||+++++.++.. ..
T Consensus 2 ~lg~g~~g--~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~--------~~ 70 (270)
T cd05047 2 VIGEGNFG--QVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR--------GY 70 (270)
T ss_pred cCCCCCCc--eEEEEEEcCCCCeeEEEEEEccccC-CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecC--------CC
Confidence 577777 7 8999999888764 5778776422 223455788999999999 799999999999864 37
Q ss_pred EEEEecCC--cChHHHHHHhCcC-------------CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC
Q 004025 102 IYIVTEPV--MPLSEKIKELGLE-------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL 166 (778)
Q Consensus 102 lyIVtE~v--~~L~~~L~~~~~~-------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g 166 (778)
+|+||||+ ++|.+++...... .......+.+++.||+.||.|||+ .+++||||||+||+++.++
T Consensus 71 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~-~~i~H~dikp~nili~~~~ 149 (270)
T cd05047 71 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ-KQFIHRDLAARNILVGENY 149 (270)
T ss_pred ceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH-CCEeecccccceEEEcCCC
Confidence 89999999 5899998764321 112345567789999999999995 9999999999999999999
Q ss_pred cEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhh
Q 004025 167 DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE 245 (778)
Q Consensus 167 ~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~ 245 (778)
.+||+|||++....... .......+..|+|||++.+ ..++.++|+|||||++|||++ |..||....
T Consensus 150 ~~kl~dfgl~~~~~~~~-------~~~~~~~~~~y~apE~~~~------~~~~~~~Di~slG~il~el~~~g~~pf~~~~ 216 (270)
T cd05047 150 VAKIADFGLSRGQEVYV-------KKTMGRLPVRWMAIESLNY------SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 216 (270)
T ss_pred eEEECCCCCccccchhh-------hccCCCCccccCChHHHcc------CCCCchhhHHHHHHHHHHHHcCCCCCccccC
Confidence 99999999975332110 0011112346999999865 356789999999999999997 888874321
Q ss_pred h----h---------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 246 L----R---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 246 l----~---------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. . ....++..+.+++.+|+..+|..||++.++++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 264 (270)
T cd05047 217 CAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 264 (270)
T ss_pred HHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 1 1 112355678899999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=259.85 Aligned_cols=239 Identities=15% Similarity=0.187 Sum_probs=183.7
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCC---cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGS---PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~---~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
.+|+..+.+|.|+ | .||+|+.+.++. .|+||.+.... .....+.+.+|++.++.++||||+++++++...
T Consensus 5 ~~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 78 (268)
T cd05063 5 SHITKQKVIGAGEFG--EVFRGILKMPGRKEVAVAIKTLKPGY-TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKF--- 78 (268)
T ss_pred HHceEeeEecCCCCc--cEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccC---
Confidence 4688999999997 7 899999987665 68999886543 233456788999999999999999999999764
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+|+||||+ ++|..++..... ......+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|
T Consensus 79 -----~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~al~~lH~-~~i~H~dlkp~Nili~~~~~~kl~d 150 (268)
T cd05063 79 -----KPAMIITEYMENGALDKYLRDHDG--EFSSYQLVGMLRGIAAGMKYLSD-MNYVHRDLAARNILVNSNLECKVSD 150 (268)
T ss_pred -----CCcEEEEEcCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH-CCeeccccchhhEEEcCCCcEEECC
Confidence 3789999999 479888876431 12233345568999999999995 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhh----hh
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE----LR 247 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~----l~ 247 (778)
||++.......... ........+..|++||++.+ ..++.++|+|||||++||+++ |..||.... ..
T Consensus 151 fg~~~~~~~~~~~~---~~~~~~~~~~~y~~PE~~~~------~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~ 221 (268)
T cd05063 151 FGLSRVLEDDPEGT---YTTSGGKIPIRWTAPEAIAY------RKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMK 221 (268)
T ss_pred Cccceecccccccc---eeccCCCcCceecCHHHhhc------CCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHH
Confidence 99987665421110 00111112336999999875 356778999999999999997 887774211 11
Q ss_pred c---------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 N---------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 ~---------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. ...+|..+.+++.+|+..+|..||++.++++.
T Consensus 222 ~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~ 263 (268)
T cd05063 222 AINDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNL 263 (268)
T ss_pred HHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 1 12456778899999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.6e-29 Score=261.90 Aligned_cols=241 Identities=17% Similarity=0.192 Sum_probs=185.6
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCC-----CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEe
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDD-----GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~-----g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~ 90 (778)
...+|++.+.+|.|+ | +||.|+.+.+ ...|++|.+..... +.....+++|+++|++++||||+++++.+..
T Consensus 3 ~~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 79 (275)
T cd05046 3 PRSNLQEITTLGRGEFG--EVFLAKAKGIEEEGGETLVLVKALQKTKD-ENLQSEFRRELDMFRKLSHKNVVRLLGLCRE 79 (275)
T ss_pred ChHhceeeeeeccccee--EEEEEEeccCCcCCCcceEEEEccCCccc-hHHHHHHHHHHHHHHhcCCcceeeeEEEECC
Confidence 345799999999997 7 9999997643 46799998875422 2356678999999999999999999998875
Q ss_pred cccccCCcccEEEEEecCC--cChHHHHHHhCcCC------CcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEE
Q 004025 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLEG------SQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV 162 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~------~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v 162 (778)
. ...|+||||+ ++|.+++....... ......+..++.||+.||.|||+ .+++||||||+||++
T Consensus 80 ~--------~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~-~~i~H~dlkp~Nili 150 (275)
T cd05046 80 A--------EPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSN-ARFVHRDLAARNCLV 150 (275)
T ss_pred C--------CcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhh-cCcccCcCccceEEE
Confidence 3 3789999999 58999987654211 23345566779999999999995 899999999999999
Q ss_pred cCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCC
Q 004025 163 TQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLS 241 (778)
Q Consensus 163 ~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~ 241 (778)
+.++.+||+|||++........ ........+..|++||.+.+. ....++|+|||||++|+|++ |..+|
T Consensus 151 ~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~~~~~~y~~PE~~~~~------~~~~~~Di~slG~~l~~l~~~~~~p~ 219 (275)
T cd05046 151 SSQREVKVSLLSLSKDVYNSEY-----YKLRNALIPLRWLAPEAVQED------DFSTKSDVWSFGVLMWEVFTQGELPF 219 (275)
T ss_pred eCCCcEEEcccccccccCcccc-----cccCCceeEEeecChhhhccC------CCCchhhHHHHHHHHHHHHhCCCCCc
Confidence 9999999999999875432110 001111234479999987652 45678999999999999998 56666
Q ss_pred Chh---h-h----------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 242 KTE---E-L----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 242 ~~~---~-l----------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
... . + .....+|..+..++.+||+.+|.+||++.+++..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 220 YGLSDEEVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred cccchHHHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 321 0 0 0123567789999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.8e-29 Score=263.70 Aligned_cols=240 Identities=17% Similarity=0.185 Sum_probs=183.3
Q ss_pred CceeccCCCCCC-CceEEEEeEE----CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTS----KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~----k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
-|++.+.+|.|+ | .||.++. +.++..|+||.+.... .......+.+|+.+|+.++||||+++++++....
T Consensus 5 ~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-- 79 (284)
T cd05079 5 FLKRIRDLGEGHFG--KVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDG-- 79 (284)
T ss_pred hhhhceecCCCCce--eEEEEEEccCCCCccceEEEEEcCccc-cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCC--
Confidence 478999999998 8 8998873 5678899999987543 2344567899999999999999999999987653
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
...+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 80 ----~~~~~lv~e~~~g~~L~~~l~~~~~--~~~~~~~~~i~~~i~~aL~~lH~-~gi~H~dlkp~Nil~~~~~~~~l~d 152 (284)
T cd05079 80 ----GNGIKLIMEFLPSGSLKEYLPRNKN--KINLKQQLKYAVQICKGMDYLGS-RQYVHRDLAARNVLVESEHQVKIGD 152 (284)
T ss_pred ----CCceEEEEEccCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHH-CCeeecccchheEEEcCCCCEEECC
Confidence 24789999999 579998865432 12334456679999999999995 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh--------
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-------- 244 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~-------- 244 (778)
||++..+........ .......+..|+|||.+.+ ..++.++|+|||||++|||+++..+....
T Consensus 153 fg~~~~~~~~~~~~~---~~~~~~~~~~y~apE~~~~------~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~ 223 (284)
T cd05079 153 FGLTKAIETDKEYYT---VKDDLDSPVFWYAPECLIQ------SKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMI 223 (284)
T ss_pred CccccccccCcccee---ecCCCCCCccccCHHHhcc------CCCCccccchhhhhhhhhhhcCCCCCccccchhhhhc
Confidence 999887654221100 0011122347999998765 34667899999999999999875432110
Q ss_pred -----------h---------hhccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 245 -----------E---------LRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 245 -----------~---------l~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. ......++..+.+++.+||+.+|.+||++.++++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 224 GPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred ccccccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 0 00113456778899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.5e-29 Score=266.99 Aligned_cols=244 Identities=16% Similarity=0.250 Sum_probs=185.4
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEEC-------CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEee
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSK-------DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLH 86 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k-------~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d 86 (778)
+...+|++++.+|.|+ | .||.|+.. .++..|+||.+.... .......+.+|+..++.+ +||||+++++
T Consensus 12 ~~~~~~~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~ 88 (304)
T cd05101 12 FSRDKLTLGKPLGEGCFG--QVVMAEALGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLG 88 (304)
T ss_pred ccHHHeeecceeeccCCc--eEEEEEEeccCCCCCCcceeEEeeeccccc-chHHHHHHHHHHHHHHhhccCCCchheeE
Confidence 3456799999999998 7 89999753 234579999987542 223456788999999999 8999999999
Q ss_pred eeEecccccCCcccEEEEEecCC--cChHHHHHHhCcCC-------------CcchHHHHHHHHHHHHHHHHHHcCCCcc
Q 004025 87 STEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEG-------------SQRDEYYAWGLNQIAKAVSFLNNDCKLV 151 (778)
Q Consensus 87 ~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~-------------~~~~~~i~~gl~QI~~aL~fLH~~~~iv 151 (778)
.+..+ ..+|+||||+ ++|.+++....... ......+.+++.||+.||.|||+ .+++
T Consensus 89 ~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~-~giv 159 (304)
T cd05101 89 ACTQD--------GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS-QKCI 159 (304)
T ss_pred EEecC--------CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHH-CCee
Confidence 99764 3789999999 58999998653211 11223356678999999999995 8999
Q ss_pred ccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHH
Q 004025 152 HGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLI 231 (778)
Q Consensus 152 H~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~li 231 (778)
||||||+||+++.+|.+||+|||+++......... .......+..|+|||++.+ ..++.++|+|||||++
T Consensus 160 H~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l 229 (304)
T cd05101 160 HRDLAARNVLVTENNVMKIADFGLARDVNNIDYYK----KTTNGRLPVKWMAPEALFD------RVYTHQSDVWSFGVLM 229 (304)
T ss_pred ecccccceEEEcCCCcEEECCCccceecccccccc----cccCCCCCceeeCchhhcc------CCCCchhhHHHHHHHH
Confidence 99999999999999999999999998765422110 0111122347999999866 3567789999999999
Q ss_pred HHHHh-CCCCCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 232 YELFS-GMRLSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 232 yel~t-g~~p~~~~~l~-------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
|++++ |..++...... ....+|..+..++.+||..+|..||++.++++.-
T Consensus 230 ~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l 293 (304)
T cd05101 230 WEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDL 293 (304)
T ss_pred HHHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHH
Confidence 99998 66665432111 1134667889999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=263.49 Aligned_cols=241 Identities=14% Similarity=0.164 Sum_probs=182.9
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECC-----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEec
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKD-----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~-----~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e 91 (778)
..+|++.+.+|.|+ | .||+|+.+. .+..|+||.+...... .....+.+|+..++.++||||+++++.+...
T Consensus 5 ~~~~~i~~~lg~G~~g--~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (288)
T cd05061 5 REKITLLRELGQGSFG--MVYEGNARDIIKGEAETRVAVKTVNESASL-RERIEFLNEASVMKGFTCHHVVRLLGVVSKG 81 (288)
T ss_pred HHHceeeeeecCCCCc--EEEEEEEeccCCCCcceEEEEEECCCcCCH-HHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 45799999999998 8 899997653 3458999998654322 2344578899999999999999999998753
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcC-------CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEE
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV 162 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~-------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v 162 (778)
...|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++||||||+||++
T Consensus 82 --------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~-~~i~H~dikp~nili 152 (288)
T cd05061 82 --------QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA-KKFVHRDLAARNCMV 152 (288)
T ss_pred --------CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcCCCCChheEEE
Confidence 3789999999 6899999764321 111223455668999999999995 899999999999999
Q ss_pred cCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCC
Q 004025 163 TQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLS 241 (778)
Q Consensus 163 ~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~ 241 (778)
+.++.+||+|||+++.......... ......+..|++||.+.++ .++.++|+|||||++|||++ |..||
T Consensus 153 ~~~~~~~L~Dfg~~~~~~~~~~~~~----~~~~~~~~~y~~pE~~~~~------~~~~~~DvwslG~~l~el~~~~~~p~ 222 (288)
T cd05061 153 AHDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVRWMAPESLKDG------VFTTSSDMWSFGVVLWEITSLAEQPY 222 (288)
T ss_pred cCCCcEEECcCCccccccccccccc----cCCCcccccccCHHHhccC------CCChHhHHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999876543211000 0011223479999998763 56778999999999999998 56666
Q ss_pred Chhh---h----------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 242 KTEE---L----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 242 ~~~~---l----------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
.... . .....+|..+.+++.+||+.+|.+||++.++++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 274 (288)
T cd05061 223 QGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNL 274 (288)
T ss_pred CCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 4311 1 0112456778999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7e-31 Score=267.00 Aligned_cols=232 Identities=16% Similarity=0.197 Sum_probs=192.6
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
-|++.+++|+|+ | .||++.+|.+|+.|+||.+... ..++.+-.|+.++.+++.|++++||++|...+
T Consensus 34 VFDi~~KLGEGSYG--SV~KAIH~EsG~v~AIK~VPV~----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~s------ 101 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYG--SVHKAIHRESGHVLAIKKVPVD----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHS------ 101 (502)
T ss_pred HHHHHHHhcCCcch--HHHHHHHhccCcEEEEEecCcc----chHHHHHHHHHHHHHcCCchhhhhhhhhccCC------
Confidence 488899999998 8 8999999999999999998753 34667889999999999999999999998643
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
.++|||||| ++.++.++.++.. ..+..|..++...++||.||| +.+-+|||||..||+++.+|..||+|||.+
T Consensus 102 --DLWIVMEYCGAGSiSDI~R~R~K~--L~E~EIs~iL~~TLKGL~YLH-~~~KIHRDIKAGNILLNT~G~AKLADFGVA 176 (502)
T KOG0574|consen 102 --DLWIVMEYCGAGSISDIMRARRKP--LSEQEISAVLRDTLKGLQYLH-DLKKIHRDIKAGNILLNTDGIAKLADFGVA 176 (502)
T ss_pred --ceEeehhhcCCCcHHHHHHHhcCC--ccHHHHHHHHHHHHhHHHHHH-HHHHHHhhcccccEEEcccchhhhhhcccc
Confidence 799999999 5799988765532 334557778999999999999 588999999999999999999999999999
Q ss_pred cccCCCCCCCCCCcccc-ccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh-hhhccCCC--
Q 004025 177 SEFDGNNEAANGPMLQY-AWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-ELRNTASI-- 252 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~-~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~-~l~~~~~i-- 252 (778)
..+.+. +... .-++++-||+||++.. -+|...+||||||+...||..|++|+..- ..+.+.-|
T Consensus 177 GQLTDT-------MAKRNTVIGTPFWMAPEVI~E------IGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT 243 (502)
T KOG0574|consen 177 GQLTDT-------MAKRNTVIGTPFWMAPEVIEE------IGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPT 243 (502)
T ss_pred chhhhh-------HHhhCccccCcccccHHHHHH------hccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccC
Confidence 888652 2222 2245568999999986 46788999999999999999999988542 22222211
Q ss_pred ------------CcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 253 ------------PKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 253 ------------P~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+.+.++.||-.+|++|-++.++++|+
T Consensus 244 ~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~ 284 (502)
T KOG0574|consen 244 KPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHT 284 (502)
T ss_pred CCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhh
Confidence 23466778999999999999999999997
|
|
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=264.49 Aligned_cols=240 Identities=15% Similarity=0.178 Sum_probs=183.7
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECC-----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEec
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKD-----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~-----~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e 91 (778)
.-+|.+.+.+|.|+ | .||.|.... ++..|++|.+.... ......+.+|+..+++++||||+++++.++..
T Consensus 4 ~~~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 79 (291)
T cd05094 4 RRDIVLKRELGEGAFG--KVFLAECYNLSPTKDKMLVAVKALKDPT--LAARKDFQREAELLTNLQHEHIVKFYGVCGDG 79 (291)
T ss_pred hHHeEEeeeecccCCC--eEEEeEeeccCCCCcceeeEEEecCCcc--HHHHHHHHHHHHHHhcCCCCCcceEEEEEccC
Confidence 34689999999997 7 899998643 45668888876432 23345688999999999999999999999763
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCc-------------CCCcchHHHHHHHHHHHHHHHHHHcCCCccccccC
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGL-------------EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~-------------~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLk 156 (778)
...|+||||+ ++|.+++..... ........+..++.||+.||.|||+ .+++|||||
T Consensus 80 --------~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~-~~i~H~dlk 150 (291)
T cd05094 80 --------DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS-QHFVHRDLA 150 (291)
T ss_pred --------CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccC
Confidence 3789999999 579999976432 1112334466679999999999995 899999999
Q ss_pred CCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh
Q 004025 157 LSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS 236 (778)
Q Consensus 157 p~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t 236 (778)
|+||+++.++.+||+|||++.......... ......+...|+|||.+.+ ..++.++|+|||||++|||++
T Consensus 151 p~Nil~~~~~~~~l~dfg~a~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el~t 220 (291)
T cd05094 151 TRNCLVGANLLVKIGDFGMSRDVYSTDYYR----VGGHTMLPIRWMPPESIMY------RKFTTESDVWSFGVILWEIFT 220 (291)
T ss_pred cceEEEccCCcEEECCCCcccccCCCceee----cCCCCCcceeecChHHhcc------CCCCchhhHHHHHHHHHHHHh
Confidence 999999999999999999987654321100 0011122347999999876 356778999999999999998
Q ss_pred -CCCCCChhhh-------------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 237 -GMRLSKTEEL-------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 237 -g~~p~~~~~l-------------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
|..||..... .....+|..+.+++.+||..+|..||++.++++.
T Consensus 221 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~ 278 (291)
T cd05094 221 YGKQPWFQLSNTEVIECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKI 278 (291)
T ss_pred CCCCCCCCCCHHHHHHHHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 8887643211 0113457789999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.5e-29 Score=267.17 Aligned_cols=243 Identities=15% Similarity=0.225 Sum_probs=184.3
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECC-------CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeee
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKD-------DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHS 87 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~-------~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~ 87 (778)
...+|.+++.||.|+ | .||.++++. ++..|++|.+.... .+.....+.+|+..++.+ +||||+++++.
T Consensus 16 ~~~~~~i~~~lg~G~~g--~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~ 92 (307)
T cd05098 16 PRDRLVLGKPLGEGCFG--QVVMAEAIGLDKEKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLLGA 92 (307)
T ss_pred ehHHeEEeeeeccCCCe--eEEEeEEeccCCcccCccceEEEEeccCCC-ChHHHHHHHHHHHHHHHhcCCCCEeeEEEE
Confidence 335799999999998 8 899998643 23569999987542 233455688899999999 79999999999
Q ss_pred eEecccccCCcccEEEEEecCC--cChHHHHHHhCcC-------------CCcchHHHHHHHHHHHHHHHHHHcCCCccc
Q 004025 88 TEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVH 152 (778)
Q Consensus 88 ~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~-------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH 152 (778)
+..+ ..+|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++|
T Consensus 93 ~~~~--------~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~-~gi~H 163 (307)
T cd05098 93 CTQD--------GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS-KKCIH 163 (307)
T ss_pred EecC--------CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH-CCccc
Confidence 9764 3799999999 5799999765321 112233456669999999999995 99999
Q ss_pred cccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHH
Q 004025 153 GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIY 232 (778)
Q Consensus 153 ~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liy 232 (778)
|||||+||+++.++.+||+|||++........... ......+..|+|||.+.+ ..++.++|+|||||++|
T Consensus 164 ~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~~l~ 233 (307)
T cd05098 164 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK----TTNGRLPVKWMAPEALFD------RIYTHQSDVWSFGVLLW 233 (307)
T ss_pred ccccHHheEEcCCCcEEECCCcccccccccchhhc----cccCCCccceeChHHhcc------CCCCcHHHHHHHHHHHH
Confidence 99999999999999999999999876643211000 011112347999998876 35677899999999999
Q ss_pred HHHh-CCCCCChhhhhc-------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 233 ELFS-GMRLSKTEELRN-------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 233 el~t-g~~p~~~~~l~~-------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
||++ |..|+....... ...++..+..++.+||..+|..||++.++++.-
T Consensus 234 el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l 296 (307)
T cd05098 234 EIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 296 (307)
T ss_pred HHHcCCCCCCCcCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHH
Confidence 9998 667764322111 123566788899999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-28 Score=264.98 Aligned_cols=239 Identities=16% Similarity=0.151 Sum_probs=187.3
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCC-CchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTN-AQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~-~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
+...|+..+.+|.|+ | +||.|+++.+++.|+||.+.... ........+.+|+++++.++||||+++++++...
T Consensus 13 ~~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 87 (308)
T cd06634 13 PEKLFSDLREIGHGSFG--AVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE--- 87 (308)
T ss_pred cHHHHHHHHheeeCCCE--EEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcC---
Confidence 445688888999987 7 89999999999999999987532 2223455677899999999999999999999864
Q ss_pred cCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 95 ATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 95 g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
...|+|+||+ +.|..++..... ......+..++.|++.||.|||+ .+++||||+|+||+++.+|.+||+||
T Consensus 88 -----~~~~lv~e~~~~~l~~~~~~~~~--~l~~~~~~~~~~~l~~~l~~LH~-~~i~H~dl~p~nil~~~~~~~kl~df 159 (308)
T cd06634 88 -----HTAWLVMEYCLGSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHS-HNMIHRDVKAGNILLSEPGLVKLGDF 159 (308)
T ss_pred -----CeeEEEEEccCCCHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHhEEECCCCcEEECCc
Confidence 3789999999 567776654332 12344566779999999999995 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hh--
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LR-- 247 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~-- 247 (778)
|++....... ...++..|+|||.+.+.- ....+.++|+|||||++|+|++|..|+.... +.
T Consensus 160 g~~~~~~~~~----------~~~~~~~y~aPE~~~~~~---~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~ 226 (308)
T cd06634 160 GSASIMAPAN----------XFVGTPYWMAPEVILAMD---EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI 226 (308)
T ss_pred ccceeecCcc----------cccCCccccCHHHHhhcc---cCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHH
Confidence 9987654321 112345799999975310 0235678999999999999999998764321 10
Q ss_pred --c------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 --N------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 --~------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ...++..+..++++||..+|.+||++.++++|+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~ 268 (308)
T cd06634 227 AQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 268 (308)
T ss_pred hhcCCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCc
Confidence 0 124566788999999999999999999999998
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-29 Score=281.18 Aligned_cols=237 Identities=15% Similarity=0.192 Sum_probs=186.8
Q ss_pred CCCc-eeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCC--CCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 18 DLPY-NIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGT--NAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 18 ~~~Y-~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~--~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
..+| .+.+.||.|. - +||+|.+-.+|-.||--.+... ......++++..|++.||.|+||||+++|+++.+..
T Consensus 38 ~gRy~k~~evLGrGafK--tVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~- 114 (632)
T KOG0584|consen 38 TGRYLKFDEVLGRGAFK--TVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTD- 114 (632)
T ss_pred CCceeehhhhcccccce--eeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCC-
Confidence 3344 3445788886 4 8999999999988875443321 123356789999999999999999999999999866
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCC-CccccccCCCCeEEc-CCCcEE
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDC-KLVHGNVCLSSVVVT-QTLDWK 169 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~-~ivH~dLkp~NI~v~-~~g~~K 169 (778)
..++.+|||.+ |.|..|+++.+... ...++.++.||++||.|||+.. .|+|||||.+||||+ ..|.+|
T Consensus 115 -----n~~in~iTEL~TSGtLr~Y~kk~~~vn---~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VK 186 (632)
T KOG0584|consen 115 -----NKTINFITELFTSGTLREYRKKHRRVN---IKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVK 186 (632)
T ss_pred -----CceeeeeeecccCCcHHHHHHHhccCC---HHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCcee
Confidence 45899999999 67999999877543 3346666999999999999733 699999999999999 569999
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCCh-hhhhc
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT-EELRN 248 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~-~~l~~ 248 (778)
|||+|+++....... ..-++++.|||||+... .|...+||||||+.|.||.++..||.. ....+
T Consensus 187 IGDLGLAtl~r~s~a--------ksvIGTPEFMAPEmYEE-------~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQ 251 (632)
T KOG0584|consen 187 IGDLGLATLLRKSHA--------KSVIGTPEFMAPEMYEE-------NYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQ 251 (632)
T ss_pred ecchhHHHHhhcccc--------ceeccCccccChHHHhh-------hcchhhhhhhhhHHHHHHHhccCChhhhCCHHH
Confidence 999999998865311 11256779999999874 677899999999999999999988742 11111
Q ss_pred c-----C--------CCC-cchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 T-----A--------SIP-KSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ~-----~--------~iP-~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+ . ++. +.+++++.+||.. ...|+++.++|+++
T Consensus 252 IYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~ 297 (632)
T KOG0584|consen 252 IYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLKDP 297 (632)
T ss_pred HHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhhCh
Confidence 1 1 221 3478889999999 99999999999997
|
|
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-28 Score=255.31 Aligned_cols=231 Identities=16% Similarity=0.183 Sum_probs=178.2
Q ss_pred cCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEE
Q 004025 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~ly 103 (778)
+.+|.|+ | .||.+.++. ++.|+||++...... .....+.+|++++++++||||++++++++.+ ...|
T Consensus 1 ~~lg~g~~g--~v~~~~~~~-~~~v~~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--------~~~~ 68 (251)
T cd05041 1 EKIGKGNFG--DVYKGVLKG-NTEVAVKTCRSTLPP-DLKRKFLQEAEILKQYDHPNIVKLIGVCVQK--------QPIY 68 (251)
T ss_pred CccccCCCc--eEEEEEEeC-CCcEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCeEEEEEEEecC--------CCeE
Confidence 3577777 7 899999887 999999998765333 3456789999999999999999999998864 3789
Q ss_pred EEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCC
Q 004025 104 IVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (778)
Q Consensus 104 IVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~ 181 (778)
+|+||+ ++|.+++..... ......+...+.|++.||.|||+ .+++||||+|+||+++.++.+||+|||++.....
T Consensus 69 ~v~e~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~lH~-~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~ 145 (251)
T cd05041 69 IVMELVPGGSLLTFLRKKKN--RLTVKKLLQMSLDAAAGMEYLES-KNCIHRDLAARNCLVGENNVLKISDFGMSREEEG 145 (251)
T ss_pred EEEEcCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHh-CCEehhhcCcceEEEcCCCcEEEeeccccccccC
Confidence 999999 579888876432 12334455568899999999995 8999999999999999999999999999876643
Q ss_pred CCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhh-------hhc-----
Q 004025 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE-------LRN----- 248 (778)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~-------l~~----- 248 (778)
....... .....+..|+|||.+.++ .++.++|+|||||++|||++ |..+|.... +..
T Consensus 146 ~~~~~~~----~~~~~~~~y~~PE~~~~~------~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~ 215 (251)
T cd05041 146 GIYTVSD----GLKQIPIKWTAPEALNYG------RYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMP 215 (251)
T ss_pred Ccceecc----ccCcceeccCChHhhccC------CCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCCC
Confidence 2110000 001123369999998763 56789999999999999998 666664321 111
Q ss_pred -cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 249 -TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 249 -~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
...+|..+.+++.+|+..+|.+||++.++++.
T Consensus 216 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~ 248 (251)
T cd05041 216 APQLCPEEIYRLMLQCWAYDPENRPSFSEIYNE 248 (251)
T ss_pred CCccCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence 12456788999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-28 Score=255.13 Aligned_cols=230 Identities=18% Similarity=0.209 Sum_probs=176.8
Q ss_pred cCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEE
Q 004025 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~ly 103 (778)
+.||.|+ | .||+|..+ ++..|++|.+..... ......+.+|++.+++++||||+++++.+... ...|
T Consensus 1 ~~ig~g~~g--~vy~~~~~-~~~~~a~K~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--------~~~~ 68 (250)
T cd05085 1 ELLGKGNFG--EVFKGTLK-DKTPVAVKTCKEDLP-QELKIKFLSEARILKQYDHPNIVKLIGVCTQR--------QPIY 68 (250)
T ss_pred CccCCCCCc--eEEEEEec-CCcEEEEEecCCcCC-HHHHHHHHHHHHHHHhCCCCCcCeEEEEEecC--------CccE
Confidence 3577777 7 89999865 689999999875432 23344688999999999999999999998764 3789
Q ss_pred EEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCC
Q 004025 104 IVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (778)
Q Consensus 104 IVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~ 181 (778)
+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+|||++.....
T Consensus 69 lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~-~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 145 (250)
T cd05085 69 IVMELVPGGDFLSFLRKKKD--ELKTKQLVKFALDAAAGMAYLES-KNCIHRDLAARNCLVGENNVLKISDFGMSRQEDD 145 (250)
T ss_pred EEEECCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHh-CCeeecccChheEEEcCCCeEEECCCccceeccc
Confidence 999999 578888865432 12344456668999999999995 8999999999999999999999999999875433
Q ss_pred CCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh-------------
Q 004025 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR------------- 247 (778)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~------------- 247 (778)
..... ......+..|+|||++.+. .++.++|+|||||++|++++ |..||......
T Consensus 146 ~~~~~-----~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~ 214 (250)
T cd05085 146 GIYSS-----SGLKQIPIKWTAPEALNYG------RYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMS 214 (250)
T ss_pred ccccc-----CCCCCCcccccCHHHhccC------CCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 11000 0001123469999998763 46778999999999999998 77777432111
Q ss_pred ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 ~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+|..+.+++.+|++.+|..||++.++++.
T Consensus 215 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 247 (250)
T cd05085 215 CPQKCPDDVYKVMQRCWDYKPENRPKFSELQKE 247 (250)
T ss_pred CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence 113467788999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=259.88 Aligned_cols=241 Identities=15% Similarity=0.156 Sum_probs=183.7
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCC---cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGS---PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~---~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
..|.+.+.+|.|+ | .||+|..+.++. .|+||.+.... .+.....+.+|+..++.++||||+++++.+..+
T Consensus 4 ~~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~--- 77 (269)
T cd05065 4 SCVKIEEVIGAGEFG--EVCRGRLKLPGKREIFVAIKTLKSGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKS--- 77 (269)
T ss_pred HHeEEEeEecCCCCC--eEEEEEEecCCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCC---
Confidence 3589999999998 8 899999987765 59999987542 334456789999999999999999999998763
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+|+||||+ ++|..++..... ......+..++.|++.||.|||+ .+++|+||+|+||+++.++.+||+|
T Consensus 78 -----~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~~l~~al~~lH~-~g~~H~dl~p~nili~~~~~~kl~d 149 (269)
T cd05065 78 -----RPVMIITEFMENGALDSFLRQNDG--QFTVIQLVGMLRGIAAGMKYLSE-MNYVHRDLAARNILVNSNLVCKVSD 149 (269)
T ss_pred -----CceEEEEecCCCCcHHHHHhhCCC--CCCHHHHHHHHHHHHHHHHHHHH-CCEeecccChheEEEcCCCcEEECC
Confidence 3789999999 469888876432 12233455568999999999995 9999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR---- 247 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~---- 247 (778)
||++........... .........+..|++||.+.+ ..++.++|+|||||++||+++ |..||......
T Consensus 150 fg~~~~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~------~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~ 222 (269)
T cd05065 150 FGLSRFLEDDTSDPT-YTSSLGGKIPIRWTAPEAIAY------RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIN 222 (269)
T ss_pred CccccccccCccccc-cccccCCCcceeecCHhHhcc------CcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHH
Confidence 999876644211100 000001111236999999875 356778999999999999886 87776432110
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 ---------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+|..+.+++.+||..+|..||++.+++..
T Consensus 223 ~i~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 264 (269)
T cd05065 223 AIEQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVST 264 (269)
T ss_pred HHHcCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 113456678899999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=263.76 Aligned_cols=242 Identities=12% Similarity=0.145 Sum_probs=182.1
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECC----------------CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCC
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKD----------------DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHP 79 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~----------------~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHP 79 (778)
+..+|++.+.||.|+ | +||.+.++. ++..|+||++.... .......+.+|+++|+.++||
T Consensus 3 ~~~~~~~~~~lg~G~~g--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~~E~~~l~~l~~~ 79 (296)
T cd05095 3 PRKRLTFKEKLGEGQFG--EVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA-NKNARNDFLKEIKIMSRLKDP 79 (296)
T ss_pred ChhhceeeeeccCCCCC--eEEecccccccccccccccccCCCCceeEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCC
Confidence 344699999999998 8 899885432 34578999987542 233456788999999999999
Q ss_pred CeeeEeeeeEecccccCCcccEEEEEecCC--cChHHHHHHhCcCCC--------cchHHHHHHHHHHHHHHHHHHcCCC
Q 004025 80 NILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGS--------QRDEYYAWGLNQIAKAVSFLNNDCK 149 (778)
Q Consensus 80 nIlk~~d~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~--------~~~~~i~~gl~QI~~aL~fLH~~~~ 149 (778)
||+++++++..+ ..+|+||||+ ++|.+++........ .....+..++.||+.||.|||+ .+
T Consensus 80 ~i~~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~-~~ 150 (296)
T cd05095 80 NIIRLLAVCITS--------DPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSS-LN 150 (296)
T ss_pred CcceEEEEEecC--------CccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHH-CC
Confidence 999999999764 3789999999 479998877542211 1123356669999999999995 89
Q ss_pred ccccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHH
Q 004025 150 LVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGC 229 (778)
Q Consensus 150 ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~ 229 (778)
++||||||+||+++.++.+||+|||++..+....... .......+..|++||...++ .++.++|+|||||
T Consensus 151 i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~----~~~~~~~~~~~~~pe~~~~~------~~~~~~DiwSlG~ 220 (296)
T cd05095 151 FVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYR----IQGRAVLPIRWMSWESILLG------KFTTASDVWAFGV 220 (296)
T ss_pred eecccCChheEEEcCCCCEEeccCcccccccCCccee----ccCcCcCccccCCHHHHhcC------CccchhhhhHHHH
Confidence 9999999999999999999999999988664321100 00011223579999987653 4677999999999
Q ss_pred HHHHHHh--CCCCCChhh----h----------------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 230 LIYELFS--GMRLSKTEE----L----------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 230 liyel~t--g~~p~~~~~----l----------------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
++|||++ |..|+.... . .....+|..+.+++.+||..+|.+||++.++++.
T Consensus 221 ~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 293 (296)
T cd05095 221 TLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHAT 293 (296)
T ss_pred HHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 9999998 555653211 0 0113456778899999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=258.84 Aligned_cols=227 Identities=18% Similarity=0.243 Sum_probs=176.2
Q ss_pred cCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHH-HHhcCCCCCeeeEeeeeEecccccCCcccE
Q 004025 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVK-RLRTVRHPNILAFLHSTEVENIDATSTKIT 101 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~-~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~ 101 (778)
+.+|.|. | .||+|+++.+|+.|+||++.+..... ........|.. ..+.++||||+++++.++.+ ..
T Consensus 2 ~~l~~g~~~--~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~--------~~ 71 (260)
T cd05611 2 KPISKGAFG--SVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSK--------DY 71 (260)
T ss_pred ccCCcCCCe--eEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcC--------Ce
Confidence 4577777 7 89999999999999999997543211 22223344443 44566899999999999863 38
Q ss_pred EEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccccc
Q 004025 102 IYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (778)
Q Consensus 102 lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~ 179 (778)
+|+|+||+ ++|..+++.... .....+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+|||++...
T Consensus 72 ~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~aL~~lH~-~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 147 (260)
T cd05611 72 LYLVMEYLNGGDCASLIKTLGG---LPEDWAKQYIAEVVLGVEDLHQ-RGIIHRDIKPENLLIDQTGHLKLTDFGLSRNG 147 (260)
T ss_pred EEEEEeccCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECCCCcEEEeecccceec
Confidence 99999999 479998876542 2344566779999999999995 89999999999999999999999999988764
Q ss_pred CCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc-----------
Q 004025 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN----------- 248 (778)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~----------- 248 (778)
.... ...+...|++||.+.+. .++.++|+||||+++|+|++|..||.......
T Consensus 148 ~~~~----------~~~~~~~y~~pe~~~~~------~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 211 (260)
T cd05611 148 LENK----------KFVGTPDYLAPETILGV------GDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRIN 211 (260)
T ss_pred cccc----------cCCCCcCccChhhhcCC------CCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccC
Confidence 3311 11234579999998763 46789999999999999999998885322110
Q ss_pred -----cCCCCcchHHHHHHHhccCCCCCCCh---HHHHhcc
Q 004025 249 -----TASIPKSLLPDYQRLLSSMPSRRLNS---SKLIENS 281 (778)
Q Consensus 249 -----~~~iP~~L~~~i~~lL~~dP~~Rps~---~~lL~~~ 281 (778)
...+|..+.+++++||+.+|..||++ .+++.|+
T Consensus 212 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~ 252 (260)
T cd05611 212 WPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHP 252 (260)
T ss_pred CCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcCh
Confidence 12467889999999999999999954 7999997
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=262.45 Aligned_cols=242 Identities=17% Similarity=0.166 Sum_probs=184.2
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECC-----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEe
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKD-----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~-----~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~ 90 (778)
...+|++.+++|.|+ | .||+|.++. ++..|+||++.... .......+.+|+..+++++||||++++++++.
T Consensus 3 ~~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~ 79 (288)
T cd05050 3 PRNNIEYVRDIGQGAFG--RVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDHPNIVKLLGVCAV 79 (288)
T ss_pred ChHhceecccccccccc--cEEEEEEcccCCCCcceeEEEEecCCCc-CHHHHHHHHHHHHHHHhcCCCchheEEEEEcC
Confidence 446799999999998 8 899998753 67899999987543 23345668899999999999999999999876
Q ss_pred cccccCCcccEEEEEecCC--cChHHHHHHhCcC-------------------CCcchHHHHHHHHHHHHHHHHHHcCCC
Q 004025 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------------------GSQRDEYYAWGLNQIAKAVSFLNNDCK 149 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~-------------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ 149 (778)
+ ..+|+|+||+ ++|.+++...... .......+..++.||+.||.|||+ .+
T Consensus 80 ~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~-~~ 150 (288)
T cd05050 80 G--------KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSE-RK 150 (288)
T ss_pred C--------CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh-CC
Confidence 4 3789999999 4799998754311 011223355669999999999995 89
Q ss_pred ccccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHH
Q 004025 150 LVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGC 229 (778)
Q Consensus 150 ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~ 229 (778)
++||||+|+||+++.+|.+||+|||++..+........ ......+..|+|||.+.+ ..++.++|+|||||
T Consensus 151 i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~ 220 (288)
T cd05050 151 FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKA----SENDAIPIRWMPPESIFY------NRYTTESDVWAYGV 220 (288)
T ss_pred eecccccHhheEecCCCceEECccccceecccCccccc----cCCCccChhhcCHHHHhc------CCCCchhHHHHHHH
Confidence 99999999999999999999999999876543211000 001122347999998765 35678999999999
Q ss_pred HHHHHHh-CCCCCChh---h-hh---------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 230 LIYELFS-GMRLSKTE---E-LR---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 230 liyel~t-g~~p~~~~---~-l~---------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
++|||++ |..+|... . +. ....+|..+.+++.+||+.+|.+||++.++++.
T Consensus 221 il~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~ 285 (288)
T cd05050 221 VLWEIFSYGMQPYYGMAHEEVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRI 285 (288)
T ss_pred HHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence 9999997 66555321 1 11 012456778999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=261.94 Aligned_cols=228 Identities=14% Similarity=0.180 Sum_probs=175.0
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHH---HHhcCCCCCeeeEeeeeEecccccCCcccE
Q 004025 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVK---RLRTVRHPNILAFLHSTEVENIDATSTKIT 101 (778)
Q Consensus 27 lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~---~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~ 101 (778)
+|+|+ | .||+++++.+++.|+||.+.+..... .......+|.. .+...+||||+.+++.+..+ ..
T Consensus 2 lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------~~ 71 (279)
T cd05633 2 IGRGGFG--EVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTP--------DK 71 (279)
T ss_pred cccCCCe--EEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecC--------Ce
Confidence 56776 7 89999999999999999997653321 11223344443 34445799999999999864 38
Q ss_pred EEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccccc
Q 004025 102 IYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (778)
Q Consensus 102 lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~ 179 (778)
.|+||||+ ++|..++...+. .....+..++.||+.||.|||+ .+++|+||||+||+++.++.+||+|||++...
T Consensus 72 ~~lv~e~~~~~~L~~~i~~~~~---l~~~~~~~i~~qi~~al~~lH~-~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~ 147 (279)
T cd05633 72 LCFILDLMNGGDLHYHLSQHGV---FSEKEMRFYATEIILGLEHMHN-RFVVYRDLKPANILLDEHGHVRISDLGLACDF 147 (279)
T ss_pred EEEEEecCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCcCCCCCCHHHEEECCCCCEEEccCCcceec
Confidence 99999999 579888876542 2344566779999999999995 89999999999999999999999999998765
Q ss_pred CCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh------hhc-----
Q 004025 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE------LRN----- 248 (778)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~------l~~----- 248 (778)
.... .....++..|+|||.+..+ ..++.++|+|||||++|+|++|..||.... +..
T Consensus 148 ~~~~--------~~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 214 (279)
T cd05633 148 SKKK--------PHASVGTHGYMAPEVLQKG-----TAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTV 214 (279)
T ss_pred cccC--------ccCcCCCcCccCHHHhcCC-----CCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcC
Confidence 4321 1112345689999997642 346678999999999999999998885321 111
Q ss_pred ----cCCCCcchHHHHHHHhccCCCCCC-----ChHHHHhcc
Q 004025 249 ----TASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENS 281 (778)
Q Consensus 249 ----~~~iP~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~ 281 (778)
...++..+.+++++||..||.+|+ ++.++++|+
T Consensus 215 ~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~ 256 (279)
T cd05633 215 NVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHV 256 (279)
T ss_pred CcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCc
Confidence 124566788999999999999999 699999998
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-28 Score=259.83 Aligned_cols=239 Identities=17% Similarity=0.199 Sum_probs=184.5
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCC----cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEec
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGS----PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~----~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e 91 (778)
...+|++.+.+|.|+ | +||+|+.+.+|+ .|++|.+..... ......+.+|+.++++++||||+++++++..+
T Consensus 5 ~~~~~~~~~~ig~g~~g--~v~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 81 (279)
T cd05057 5 KETELEKIKVLGSGAFG--TVYKGVWIPEGEKVKIPVAIKVLREETS-PKANKEILDEAYVMASVDHPHVVRLLGICLSS 81 (279)
T ss_pred CHHHcEEcceecCCCCc--cEEEEEEecCCCCcceEEEEEeccCCCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEecC
Confidence 345799999999998 8 899999887776 588888765433 33456788999999999999999999998752
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEE
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~K 169 (778)
.+|+||||+ ++|.+++...... .....+..++.||+.||.|||+ ++++|+||+|+||+++.++.+|
T Consensus 82 ---------~~~~v~e~~~~g~L~~~l~~~~~~--~~~~~~~~~~~qi~~~l~~LH~-~~i~H~di~p~nil~~~~~~~k 149 (279)
T cd05057 82 ---------QVQLITQLMPLGCLLDYVRNHKDN--IGSQYLLNWCVQIAKGMSYLEE-KRLVHRDLAARNVLVKTPQHVK 149 (279)
T ss_pred ---------ceEEEEecCCCCcHHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHh-CCEEecccCcceEEEcCCCeEE
Confidence 689999999 5899988764322 2233455568999999999995 9999999999999999999999
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhhc
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELRN 248 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~~ 248 (778)
|+|||+++....... .+.......+..|++||.+.. ..++.++|+|||||++||+++ |..||.......
T Consensus 150 L~dfg~~~~~~~~~~----~~~~~~~~~~~~y~~PE~~~~------~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~ 219 (279)
T cd05057 150 ITDFGLAKLLDVDEK----EYHAEGGKVPIKWMALESILH------RIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE 219 (279)
T ss_pred ECCCcccccccCccc----ceecCCCcccccccCHHHhhc------CCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH
Confidence 999999987653211 111111122347999998765 356679999999999999998 888875422111
Q ss_pred -------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 249 -------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 249 -------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+..+..++.+||..+|..||++.++++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~ 264 (279)
T cd05057 220 IPDLLEKGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINE 264 (279)
T ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 11234567788999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=269.28 Aligned_cols=244 Identities=16% Similarity=0.234 Sum_probs=184.0
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCC-------CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEee
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDD-------GSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLH 86 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~-------g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d 86 (778)
+...+|++++.||.|+ | .||.|++... +..|+||.+... ..+.....+.+|++.++++ +||||+++++
T Consensus 9 ~~~~~~~i~~~ig~G~~g--~v~~~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~ 85 (334)
T cd05100 9 LSRTRLTLGKPLGEGCFG--QVVMAEAIGIDKDKPNKPVTVAVKMLKDD-ATDKDLSDLVSEMEMMKMIGKHKNIINLLG 85 (334)
T ss_pred cCHhHeeecceeccccCC--cEEEEEEeccCCccCCcceeEEEEEcccc-cCHHHHHHHHHHHHHHHhhcCCCCeeeeeE
Confidence 3445799999999998 7 8999976432 236899988753 2334456788999999999 7999999999
Q ss_pred eeEecccccCCcccEEEEEecCC--cChHHHHHHhCcC-------------CCcchHHHHHHHHHHHHHHHHHHcCCCcc
Q 004025 87 STEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLV 151 (778)
Q Consensus 87 ~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~-------------~~~~~~~i~~gl~QI~~aL~fLH~~~~iv 151 (778)
.+..+ ..+|+++||+ ++|.+++...... .......+..++.||+.||.|||+ .+++
T Consensus 86 ~~~~~--------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~-~giv 156 (334)
T cd05100 86 ACTQD--------GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS-QKCI 156 (334)
T ss_pred EEccC--------CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH-CCee
Confidence 98763 3799999999 5799998764311 111223355669999999999995 9999
Q ss_pred ccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHH
Q 004025 152 HGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLI 231 (778)
Q Consensus 152 H~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~li 231 (778)
||||||+||+++.++.+||+|||+++......... .......+..|+|||++.+ ..++.++|+|||||++
T Consensus 157 H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il 226 (334)
T cd05100 157 HRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYK----KTTNGRLPVKWMAPEALFD------RVYTHQSDVWSFGVLL 226 (334)
T ss_pred ccccccceEEEcCCCcEEECCcccceecccccccc----cccCCCcCceEcCHHHhcc------CCcCchhhhHHHHHHH
Confidence 99999999999999999999999998765421100 0011112246999999876 3567789999999999
Q ss_pred HHHHh-CCCCCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 232 YELFS-GMRLSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 232 yel~t-g~~p~~~~~l~-------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
|||++ |..+|...... ....++..+..++.+|++.+|..||++.+++++.
T Consensus 227 ~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l 290 (334)
T cd05100 227 WEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDL 290 (334)
T ss_pred HHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHH
Confidence 99998 66766432111 0123456788899999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-28 Score=255.49 Aligned_cols=229 Identities=17% Similarity=0.243 Sum_probs=183.2
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEEE
Q 004025 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104 (778)
Q Consensus 27 lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~lyI 104 (778)
+|.|+ | .||.++++.+++.|+||++.+..... .....+.+|+++++.++||||+++++.++.+ ..+|+
T Consensus 1 lg~G~~~--~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--------~~~~~ 70 (250)
T cd05123 1 LGKGSFG--KVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTE--------EKLYL 70 (250)
T ss_pred CCCCCce--EEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecC--------CeeEE
Confidence 45565 6 89999999899999999998754322 3466789999999999999999999999863 48999
Q ss_pred EecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCCC
Q 004025 105 VTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGN 182 (778)
Q Consensus 105 VtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~ 182 (778)
||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++|+||+|+||+++.++.++|+|||++......
T Consensus 71 v~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~~l~~lh~-~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~ 146 (250)
T cd05123 71 VLEYAPGGELFSHLSKEGR---FSEERARFYAAEIVLALEYLHS-LGIIYRDLKPENILLDADGHIKLTDFGLAKELSSE 146 (250)
T ss_pred EEecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCceecCCCcceEEEcCCCcEEEeecCcceecccC
Confidence 99999 479998877542 2344466679999999999995 99999999999999999999999999998876543
Q ss_pred CCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh----c--------cC
Q 004025 183 NEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----N--------TA 250 (778)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~----~--------~~ 250 (778)
... .........|++||...+. ..+.++|+|+|||++|++++|..||...... . ..
T Consensus 147 ~~~------~~~~~~~~~~~~Pe~~~~~------~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 214 (250)
T cd05123 147 GSR------TNTFCGTPEYLAPEVLLGK------GYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFPE 214 (250)
T ss_pred CCc------ccCCcCCccccChHHhCCC------CCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCC
Confidence 110 1111234479999998763 4567899999999999999999887543211 1 12
Q ss_pred CCCcchHHHHHHHhccCCCCCCCh---HHHHhcc
Q 004025 251 SIPKSLLPDYQRLLSSMPSRRLNS---SKLIENS 281 (778)
Q Consensus 251 ~iP~~L~~~i~~lL~~dP~~Rps~---~~lL~~~ 281 (778)
.+|..+.+++++||..+|..||++ .++++|+
T Consensus 215 ~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~ 248 (250)
T cd05123 215 FLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHP 248 (250)
T ss_pred CCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCC
Confidence 346778999999999999999999 8999997
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=260.88 Aligned_cols=241 Identities=15% Similarity=0.181 Sum_probs=186.0
Q ss_pred CCceeccCCCCCC-CceEEEEeEEC----CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSK----DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k----~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
-.|++.+.+|.|+ | .||+|+.. .++..|+||++...... ...+.+.+|++.++.++||||++++++++...
T Consensus 4 ~~~~~~~~ig~g~~~--~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~- 79 (284)
T cd05038 4 RHLKFIKQLGEGHFG--KVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENIVKYKGVCEKPG- 79 (284)
T ss_pred hhchhheeeccCCCe--eEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCChheEEeeeecCC-
Confidence 3578889999988 8 89999864 34789999999865433 34667999999999999999999999887643
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
..+.|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+
T Consensus 80 -----~~~~~lv~e~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~l~~aL~~lH~-~~i~H~dl~p~nil~~~~~~~~l~ 151 (284)
T cd05038 80 -----GRSLRLIMEYLPSGSLRDYLQRHRD--QINLKRLLLFSSQICKGMDYLGS-QRYIHRDLAARNILVESEDLVKIS 151 (284)
T ss_pred -----CCceEEEEecCCCCCHHHHHHhCcc--ccCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHhEEEcCCCCEEEc
Confidence 34799999999 479999876542 12234456679999999999995 899999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-----
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----- 246 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----- 246 (778)
|||++........... .......+..|++||...+. .++.++|+|||||++|||++|..++.....
T Consensus 152 dfg~~~~~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~------~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~ 222 (284)
T cd05038 152 DFGLAKVLPEDKDYYY---VKEPGESPIFWYAPECLRTS------KFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRM 222 (284)
T ss_pred ccccccccccCCccee---ccCCCCCcccccCcHHHccC------CCCcccchHHHhhhhheeeccCCCcccccchhccc
Confidence 9999987753211000 00111233479999988653 566789999999999999999876542110
Q ss_pred -----------------hc------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 247 -----------------RN------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 247 -----------------~~------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
.. ...+|..+..++.+||+.+|..||++.++++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 279 (284)
T cd05038 223 IGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILI 279 (284)
T ss_pred cccccccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence 00 12356678899999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-29 Score=259.94 Aligned_cols=242 Identities=19% Similarity=0.240 Sum_probs=186.7
Q ss_pred ceec-cCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecccccCC
Q 004025 21 YNIG-DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 21 Y~i~-~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~g~~ 97 (778)
|.+. +.+|+|. + .|..++...+|..+|||++++. . .....++.+|++++.+.+ |+||++++++||++.
T Consensus 79 YkLt~e~LGeGAya--sVqtcv~i~t~~EYAVKiidKq-~-gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~----- 149 (463)
T KOG0607|consen 79 YKLTSELLGEGAYA--SVQTCVSIQTGKEYAVKIIDKQ-P-GHSRSRVFREVETFYQCQGHKNILQLIEFFEDDT----- 149 (463)
T ss_pred HHhHHHHhcCccce--eeeeeeeeccchhhhhhhhhcC-C-chHHHHHHHHHHHHHHhcCCccHHHHHHHhcccc-----
Confidence 6664 4678887 7 7999999999999999999975 2 234567889999999997 999999999999864
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCc---EEEEe
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD---WKLHA 172 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~---~KL~d 172 (778)
.+|+|+|.+ +||..+|.+..... ++.-...+..|+.||.|||+ .+|.||||||+||+...-.. +||||
T Consensus 150 ---~FYLVfEKm~GGplLshI~~~~~F~---E~EAs~vvkdia~aLdFlH~-kgIAHRDlKPENiLC~~pn~vsPvKiCD 222 (463)
T KOG0607|consen 150 ---RFYLVFEKMRGGPLLSHIQKRKHFN---EREASRVVKDIASALDFLHT-KGIAHRDLKPENILCESPNKVSPVKICD 222 (463)
T ss_pred ---eEEEEEecccCchHHHHHHHhhhcc---HHHHHHHHHHHHHHHHHHhh-cCcccccCCccceeecCCCCcCceeeec
Confidence 899999999 68888887765432 22234448999999999995 99999999999999976544 89999
Q ss_pred cccccccCCCCCCCCCCccccc--c-ccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYA--W-LVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE---- 245 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~--~-~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~---- 245 (778)
|++.+.+...++.. +..... . ++.-.|||||+..- +......|+..+|.||||+++|-|+.|.+||...-
T Consensus 223 fDLgSg~k~~~~~s--pastP~L~tPvGSAEfMAPEVVd~-fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dC 299 (463)
T KOG0607|consen 223 FDLGSGIKLNNDCS--PASTPELLTPVGSAEFMAPEVVDV-FVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADC 299 (463)
T ss_pred cccccccccCCCCC--CCCCccccCcccchhhcchhHHhh-hccccccccccccHHHHHHHHHHHHhCCCCccCccCCcC
Confidence 99988776544332 222211 1 22338999999753 22233578899999999999999999999984210
Q ss_pred --------------h----h-ccCCCC--------cchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 246 --------------L----R-NTASIP--------KSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 246 --------------l----~-~~~~iP--------~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+ + .-+.+| ....+++..||..++..|.++.++++||
T Consensus 300 GWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhP 362 (463)
T KOG0607|consen 300 GWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHP 362 (463)
T ss_pred CccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCc
Confidence 0 0 113445 3466778899999999999999999999
|
|
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=264.70 Aligned_cols=242 Identities=16% Similarity=0.189 Sum_probs=185.7
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEE-----CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeee
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTS-----KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHST 88 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~-----k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~ 88 (778)
+...+|.+.+.+|.|+ | .||.|+. +.++..|+||.+..... ....+.+.+|+++++++ +||||+++++.+
T Consensus 32 ~~~~~~~~~~~ig~G~~g--~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 108 (302)
T cd05055 32 FPRNNLSFGKTLGAGAFG--KVVEATAYGLSKSDAVMKVAVKMLKPTAH-SSEREALMSELKIMSHLGNHENIVNLLGAC 108 (302)
T ss_pred ccHHHeEEcceeeccCCe--eEEEEEEecCCCCCceeEEEEEecCccCC-hHHHHHHHHHHHHHHhccCCCCcceEEEEE
Confidence 3445799999999998 8 8999875 34566899999875432 33456789999999999 799999999998
Q ss_pred EecccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC
Q 004025 89 EVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL 166 (778)
Q Consensus 89 e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g 166 (778)
... ..+|+|+||+ ++|..++....... .....+..++.||+.||.|||+ .+++|+||||+||+++.++
T Consensus 109 ~~~--------~~~~lv~e~~~~~~L~~~i~~~~~~~-l~~~~~~~i~~~i~~~l~~lH~-~~ivH~dlkp~Nil~~~~~ 178 (302)
T cd05055 109 TIG--------GPILVITEYCCYGDLLNFLRRKRESF-LTLEDLLSFSYQVAKGMAFLAS-KNCIHRDLAARNVLLTHGK 178 (302)
T ss_pred ecC--------CceEEEEEcCCCCcHHHHHHhCCCCC-CCHHHHHHHHHHHHHHHHHHHH-CCeehhhhccceEEEcCCC
Confidence 764 3799999999 57999987643211 2334456668999999999995 8999999999999999999
Q ss_pred cEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhh
Q 004025 167 DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE 245 (778)
Q Consensus 167 ~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~ 245 (778)
.+||+|||++..+...... ........+..|+|||.+.+. .++.++|+|||||++|||++ |..||....
T Consensus 179 ~~~l~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~------~~~~~~DiwslGvil~el~t~g~~p~~~~~ 248 (302)
T cd05055 179 IVKICDFGLARDIMNDSNY----VVKGNARLPVKWMAPESIFNC------VYTFESDVWSYGILLWEIFSLGSNPYPGMP 248 (302)
T ss_pred eEEECCCcccccccCCCce----eecCCCCcccccCCHhhhccC------CCCcHhHHHHHHHHHHHHHhCCCCCcCCCC
Confidence 9999999998766432110 001111233479999988763 56778999999999999997 887764321
Q ss_pred h--------h------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 246 L--------R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 246 l--------~------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. . ....++..+.+++.+||+.+|.+||++.++++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~ 297 (302)
T cd05055 249 VDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQL 297 (302)
T ss_pred chHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 1 0 012356778899999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=285.33 Aligned_cols=472 Identities=19% Similarity=0.207 Sum_probs=309.7
Q ss_pred CceeccCCCCCCCceEEEEeEECCCCCcEEEEEEeCCCCch--hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQD--GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~--~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|...+.+|++.- .+|.+|+++ ...|.||+|-+....- ...+....|++ .+.++|||++.|..+.+++
T Consensus 24 e~~~~~~LGstRF-lKv~r~k~~--eG~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~------ 93 (1431)
T KOG1240|consen 24 ECHYVENLGSTRF-LKVARAKDR--EGLVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTD------ 93 (1431)
T ss_pred ceeeecccCchhh-hhhhhccCC--CceEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhh------
Confidence 5777788887751 178888875 3349999998764221 22223334445 6667899999999998874
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
+..|||-+|+ ..|++.|..+... ..-..+|+++||+.||+-+|. .+|+|||||.+||+|+.-..+.|.||.-.
T Consensus 94 --kAAylvRqyvkhnLyDRlSTRPFL---~~iEKkWiaFQLL~al~qcH~-~gVcHGDIKsENILiTSWNW~~LtDFAsF 167 (1431)
T KOG1240|consen 94 --KAAYLVRQYVKHNLYDRLSTRPFL---VLIEKKWIAFQLLKALSQCHK-LGVCHGDIKSENILITSWNWLYLTDFASF 167 (1431)
T ss_pred --HHHHHHHHHHhhhhhhhhccchHH---HHHHHHHHHHHHHHHHHHHHH-cCccccccccceEEEeeechhhhhccccc
Confidence 4789999999 4699988876643 223468899999999999995 99999999999999999988999999876
Q ss_pred cccCC--CCCCCCCCccccccccCCCCCCcccccccc--ccccC---CCCCcchhHHHHHHHHHHHh-CCCCCChhhhhc
Q 004025 177 SEFDG--NNEAANGPMLQYAWLVGAQYKPVELAKSDW--TAVRK---SPPWSIDSWGLGCLIYELFS-GMRLSKTEELRN 248 (778)
Q Consensus 177 ~~~~~--~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~--~~~~~---~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~~ 248 (778)
+..-- +++... .++-.......+|.|||.+...- ....+ ....+.||||+||+|.|+|. |+|+|...++-.
T Consensus 168 KPtYLPeDNPadf-~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~a 246 (1431)
T KOG1240|consen 168 KPTYLPEDNPADF-TFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLA 246 (1431)
T ss_pred CCccCCCCCcccc-eEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHh
Confidence 54322 221111 11111122234899999986521 11111 14578999999999999998 578887766522
Q ss_pred c------------CCCC-cchHHHHHHHhccCCCCCCChHHHHhcccCCccccccccchhhhhhHHhhhcc---------
Q 004025 249 T------------ASIP-KSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQNKLVDTIHFMEILN--------- 306 (778)
Q Consensus 249 ~------------~~iP-~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff~n~lv~~~~~Le~l~--------- 306 (778)
. ..|+ ..+++++..|++.+|.+|.++++.|++-|+.+|. .||..-+...+..+..+.
T Consensus 247 Yr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~~FP-~yFy~FL~~Y~~~~~~~~~~~p~~~~~ 325 (1431)
T KOG1240|consen 247 YRSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQKYRGLVFP-EYFYSFLYDYLDRFVPLTTSTPISDNT 325 (1431)
T ss_pred HhccCccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHhhhccccH-HHHHHHHHHHHHhcCCccccCcccccc
Confidence 1 2343 3688999999999999999999999986665444 344433333333222222
Q ss_pred -----------------------------------------cCChhhHhH-----------------hhhhchhhhcC--
Q 004025 307 -----------------------------------------LKDSVEKDT-----------------FFRKLPNLAEQ-- 326 (778)
Q Consensus 307 -----------------------------------------~k~~~EK~~-----------------F~~~L~~~l~~-- 326 (778)
+.+.+|+.. +.++|....+.
T Consensus 326 ~~gs~i~d~~~~~~~p~n~~~~~~~~~~h~ln~~~~~~~~~~~S~De~~~~~~~al~~~r~~~~~l~~~~dl~~~~q~~~ 405 (1431)
T KOG1240|consen 326 CTGSTIEDNVKLLDGPTNKIYRDFSQICHCLNFPLIKDGGTITSSDEIIDSISKALEFSRHLIENLDVIQDLKPEKQLWT 405 (1431)
T ss_pred ccCcccccccccccCcccchhhhhhccccccccccccccccccCCcHHHHHHHHHHhhhhhhcccchhhhccchHHhccc
Confidence 111122111 11111110000
Q ss_pred --------CChhhhhhchHHHHHHHHhhCCC---CchhhHHHHHhccCCChhhhhhhhHHHHHHhhcCChHHHHHHHHHh
Q 004025 327 --------LPRQIVLKKLLPLLASALEFGSA---AAPALTALLKMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQH 395 (778)
Q Consensus 327 --------fp~~~~~~kILP~Ll~~~~~~~~---~~~~L~~llki~~~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~ 395 (778)
=|..-+.-.+++.++..+..-.. .-.+|.-+..++..++.|.--.+|+|.++-||.+++..||...|+-
T Consensus 406 ~~~~~~~~~~~~~ga~l~vs~lts~IR~lk~~~tK~~ALeLl~~lS~~i~de~~LDRVlPY~v~l~~Ds~a~Vra~Al~T 485 (1431)
T KOG1240|consen 406 ARSSPNIKDPKEEGAVLFVSVLTSCIRALKTIQTKLAALELLQELSTYIDDEVKLDRVLPYFVHLLMDSEADVRATALET 485 (1431)
T ss_pred ccCCcccCCccccceeeeHHHHHHHHHhhhcchhHHHHHHHHHHHhhhcchHHHHhhhHHHHHHHhcCchHHHHHHHHHH
Confidence 02222333455666655553322 2234555667788889999999999999999999999999999999
Q ss_pred HHHHHh------hcChhhhhhcchHHHHhhcCC-CcHHHHHHHHHHHHhhhcc----------------C----------
Q 004025 396 IDQYGQ------SFSAQVVDEQVYPHVATGFAD-TSAFLREMTLKSMLVLAPK----------------L---------- 442 (778)
Q Consensus 396 l~~~~~------~l~~~~v~~~I~P~l~~gf~D-t~~~iRe~tlksi~~l~pk----------------L---------- 442 (778)
|..++. ..+..++.+.|||++.....| ++..+|-+-...|..+|.. +
T Consensus 486 lt~~L~~Vr~~~~~daniF~eYlfP~L~~l~~d~~~~~vRiayAsnla~LA~tA~rFle~~q~~~~~g~~n~~nset~~~ 565 (1431)
T KOG1240|consen 486 LTELLALVRDIPPSDANIFPEYLFPHLNHLLNDSSAQIVRIAYASNLAQLAKTAYRFLELTQELRQAGMLNDPNSETAPE 565 (1431)
T ss_pred HHHHHhhccCCCcccchhhHhhhhhhhHhhhccCccceehhhHHhhHHHHHHHHHHHHHHHHHHHhcccccCcccccccc
Confidence 888764 456678999999999999999 5555555444444333321 1
Q ss_pred -Chhh----HhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhhhe
Q 004025 443 -SQRT----ISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAA 510 (778)
Q Consensus 443 -~~~~----l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~ 510 (778)
+... |...+-.+...|..|+++-||--..--|+-++-++++..-.-+|++-.. .-|.|..|.=|.|-
T Consensus 566 ~~~~~~~~~L~~~V~~~v~sLlsd~~~~Vkr~Lle~i~~LC~FFGk~ksND~iLshLi-TfLNDkDw~LR~aF 637 (1431)
T KOG1240|consen 566 QNYNTELQALHHTVEQMVSSLLSDSPPIVKRALLESIIPLCVFFGKEKSNDVILSHLI-TFLNDKDWRLRGAF 637 (1431)
T ss_pred cccchHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHhhhcccccchHHHHH-HHhcCccHHHHHHH
Confidence 1111 1222223455566777777777777777777777777666667776666 67777777777653
|
|
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-28 Score=259.44 Aligned_cols=238 Identities=13% Similarity=0.141 Sum_probs=179.5
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCc----EEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSP----VSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~----VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~ 92 (778)
...|++.+.||.|+ | +||+|+...+++. |++|.+.... .......+.+|+..++.++||||+++++++..
T Consensus 6 ~~~~~~~~~lg~G~~~--~vy~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-- 80 (279)
T cd05111 6 ETELRKLKLLGSGVFG--TVHKGIWIPEGDSIKIPVAIKTIQDRS-GRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-- 80 (279)
T ss_pred HhhceeccccCccCCc--ceEEEEEcCCCCceeeEEEEeeccccc-chHHHHHHHHHHHHHhcCCCCCcceEEEEECC--
Confidence 35799999999998 8 8999999888774 6777765332 22334567788889999999999999998753
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEE
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
...|+++||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.++.+||
T Consensus 81 -------~~~~~i~e~~~~gsL~~~l~~~~~~--~~~~~~~~i~~qi~~~l~~lH~-~~iiH~dlkp~nili~~~~~~kl 150 (279)
T cd05111 81 -------ASLQLVTQLSPLGSLLDHVRQHRDS--LDPQRLLNWCVQIAKGMYYLEE-HRMVHRNLAARNILLKSDSIVQI 150 (279)
T ss_pred -------CccEEEEEeCCCCcHHHHHHhcccC--CCHHHHHHHHHHHHHHHHHHHH-CCEeccccCcceEEEcCCCcEEE
Confidence 2578899998 5899998764321 2233445568999999999995 89999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh--
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR-- 247 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~-- 247 (778)
+|||+++....... .........+..|++||.+.++ .++.++|+|||||++||+++ |..|+......
T Consensus 151 ~Dfg~~~~~~~~~~----~~~~~~~~~~~~y~~pE~~~~~------~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~ 220 (279)
T cd05111 151 ADFGVADLLYPDDK----KYFYSEHKTPIKWMALESILFG------RYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEV 220 (279)
T ss_pred cCCccceeccCCCc----ccccCCCCCcccccCHHHhccC------CcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence 99999976643211 1111111233479999998763 56789999999999999998 88777532111
Q ss_pred -----c------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 -----N------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 -----~------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. ....+..+..++.+|+..+|.+||++.++++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~ 264 (279)
T cd05111 221 PDLLEKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANE 264 (279)
T ss_pred HHHHHCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 0 01234467778999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.8e-30 Score=278.87 Aligned_cols=239 Identities=16% Similarity=0.230 Sum_probs=191.1
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~ 99 (778)
++|...+|.|. | +||++..|.++-..|-|+++.+. +..++.+.-||.+|..+.||+|+++++.|..++
T Consensus 34 WeIiGELGDGAFG--KVyKA~nket~~lAAaKvIetks--eEELEDylVEIeILa~CdHP~ivkLl~ayy~en------- 102 (1187)
T KOG0579|consen 34 WEIIGELGDGAFG--KVYKAVNKETKLLAAAKVIETKS--EEELEDYLVEIEILAECDHPVIVKLLSAYYFEN------- 102 (1187)
T ss_pred HHHHhhhcCccch--hhhhhhcccchhhhhhhhhcccc--hhHHhhhhhhhhhhhcCCChHHHHHHHHHhccC-------
Confidence 56677788888 8 99999999999999999998653 345777889999999999999999999998754
Q ss_pred cEEEEEecCCc--ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 100 ITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 100 ~~lyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
.++|+.|||+ -....+-..+. ...+..|+.+++|++.||.|||+ .+|||||||..||+++-+|+++|+|||.+.
T Consensus 103 -kLwiliEFC~GGAVDaimlEL~r--~LtE~QIqvvc~q~ldALn~LHs-~~iIHRDLKAGNiL~TldGdirLADFGVSA 178 (1187)
T KOG0579|consen 103 -KLWILIEFCGGGAVDAIMLELGR--VLTEDQIQVVCYQVLDALNWLHS-QNIIHRDLKAGNILLTLDGDIRLADFGVSA 178 (1187)
T ss_pred -ceEEEEeecCCchHhHHHHHhcc--ccchHHHHHHHHHHHHHHHHHhh-cchhhhhccccceEEEecCcEeeecccccc
Confidence 8999999993 36666655442 23455688889999999999995 999999999999999999999999999875
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCCh-hhhh---------
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT-EELR--------- 247 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~-~~l~--------- 247 (778)
..... .-....+++++.|||||+..... .-...|++++||||||+.+.||.-+.||-.. +..+
T Consensus 179 Kn~~t------~qkRDsFIGTPYWMAPEVvmCET-~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSe 251 (1187)
T KOG0579|consen 179 KNKST------RQKRDSFIGTPYWMAPEVVMCET-FKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSE 251 (1187)
T ss_pred cchhH------HhhhccccCCcccccchheeecc-ccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcC
Confidence 54321 11233467778899999976421 1225789999999999999999999887532 1111
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -----~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+......++.+++++||..||..||+++++++|+
T Consensus 252 PPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hp 290 (1187)
T KOG0579|consen 252 PPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHP 290 (1187)
T ss_pred CCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCc
Confidence 1123345678899999999999999999999998
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-30 Score=259.47 Aligned_cols=250 Identities=19% Similarity=0.336 Sum_probs=195.6
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
.|+-..++|+|. | .||+|+.+.+|+.|++|+.-..+..+..-..+.+|+++|..|+|+|++.+++.+.+.....-+.
T Consensus 18 ~yek~~kigqGtfg--eVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFG--EVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred HHHHHHhcCCchHH--HHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 477777899998 8 8999999999999999987766666666677889999999999999999998886433221112
Q ss_pred ccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 99 ~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
+.++|+|+.+| .+|.-+|.+.... .....|+..+.++..||.|+|. ..|+|||+|+.||+|+.+|.+||+|||+++
T Consensus 96 r~t~ylVf~~cehDLaGlLsn~~vr--~sls~Ikk~Mk~Lm~GL~~iHr-~kilHRDmKaaNvLIt~dgilklADFGlar 172 (376)
T KOG0669|consen 96 RATFYLVFDFCEHDLAGLLSNRKVR--FSLSEIKKVMKGLMNGLYYIHR-NKILHRDMKAANVLITKDGILKLADFGLAR 172 (376)
T ss_pred cceeeeeHHHhhhhHHHHhcCcccc--ccHHHHHHHHHHHHHHHHHHHH-hhHHhhcccHhhEEEcCCceEEeecccccc
Confidence 45799999999 5788888765321 1233477779999999999995 899999999999999999999999999998
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hhc-----
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRN----- 248 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~~----- 248 (778)
.+........ +- ....+++..|++||.+.+. ..++.++|+|+-||+|.||+++.+++..+. +.-
T Consensus 173 ~fs~~~n~~k-pr-ytnrvvTLwYrppEllLG~-----r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~Lc 245 (376)
T KOG0669|consen 173 AFSTSKNVVK-PR-YTNRVVTLWYRPPELLLGD-----REYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLC 245 (376)
T ss_pred ceecccccCC-CC-cccceeeeecCCHHHhhcc-----cccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHh
Confidence 7765432221 11 2244667799999999986 678899999999999999999998875321 100
Q ss_pred -------------------c--CCCCc-----------------chHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -------------------T--ASIPK-----------------SLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -------------------~--~~iP~-----------------~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+ ..+|+ ...+++.+||..||.+|+.+++.++|.
T Consensus 246 Gs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~ 316 (376)
T KOG0669|consen 246 GSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHD 316 (376)
T ss_pred ccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchh
Confidence 0 11121 345678899999999999999999997
|
|
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-28 Score=256.21 Aligned_cols=232 Identities=16% Similarity=0.162 Sum_probs=175.9
Q ss_pred CCCCCC-CceEEEEeEEC--CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEE
Q 004025 26 PYPSAW-GSWSHFQGTSK--DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k--~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~l 102 (778)
.||.|+ | .||.|+.+ .++..|+||++.... .....+.+.+|+.++++++||||+++++.++. ...
T Consensus 2 ~ig~G~~g--~v~~~~~~~~~~~~~vavk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~---------~~~ 69 (257)
T cd05115 2 ELGSGNFG--CVKKGVYKMRKKQIDVAIKVLKNEN-EKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA---------EAL 69 (257)
T ss_pred ccCCCCcc--cEEEEEEecCCCceeEEEEEccccc-ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC---------CCe
Confidence 367777 7 89999765 445679999987543 23345678899999999999999999998863 268
Q ss_pred EEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccC
Q 004025 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (778)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~ 180 (778)
|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||++....
T Consensus 70 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~ 146 (257)
T cd05115 70 MLVMEMASGGPLNKFLSGKKD--EITVSNVVELMHQVSMGMKYLEG-KNFVHRDLAARNVLLVNQHYAKISDFGLSKALG 146 (257)
T ss_pred EEEEEeCCCCCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHh-cCeeecccchheEEEcCCCcEEeccCCcccccc
Confidence 9999999 579988875332 12334466679999999999995 899999999999999999999999999987654
Q ss_pred CCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh-------hc----
Q 004025 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL-------RN---- 248 (778)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l-------~~---- 248 (778)
....... .......+..|+|||.+.. ..++.++|+|||||++||+++ |..||..... ..
T Consensus 147 ~~~~~~~---~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~ 217 (257)
T cd05115 147 ADDSYYK---ARSAGKWPLKWYAPECINF------RKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRL 217 (257)
T ss_pred CCcccee---ccCCCCCCcccCCHHHHcc------CCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCC
Confidence 3211100 0011112347999998765 346678999999999999996 8888753211 01
Q ss_pred --cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 --TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 --~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+..+.+++.+|+..+|..||++.++.+.-
T Consensus 218 ~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l 252 (257)
T cd05115 218 DCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERM 252 (257)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 123467788999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-28 Score=261.41 Aligned_cols=239 Identities=15% Similarity=0.249 Sum_probs=185.5
Q ss_pred CceeccCCCCCC-CceEEEEeEEC---CCCCcEEEEEEeCCCCc--hhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSK---DDGSPVSIFSISGTNAQ--DGHLAAARNGVKRLRTVR-HPNILAFLHSTEVEN 92 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k---~~g~~VaIK~~~~~~~~--~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~ 92 (778)
+|++.+.+|.|+ | .||.+++. .+|..|++|++...... ....+.+.+|+++|++++ ||||++++++++.+
T Consensus 1 ~y~~~~~lg~G~~g--~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~- 77 (290)
T cd05613 1 NFELLKVLGTGAYG--KVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTD- 77 (290)
T ss_pred CceeeeeeccCCcc--eEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecC-
Confidence 489999999998 8 88988874 47899999999753221 134566889999999995 99999999999864
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEE
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
..+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||
T Consensus 78 -------~~~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~al~~lH~-~~i~H~dl~p~nil~~~~~~~kl 146 (290)
T cd05613 78 -------TKLHLILDYINGGELFTHLSQRER---FKEQEVQIYSGEIVLALEHLHK-LGIIYRDIKLENILLDSNGHVVL 146 (290)
T ss_pred -------CeEEEEEecCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHeEECCCCCEEE
Confidence 3899999999 579988876542 2244566678899999999995 99999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-----
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----- 245 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----- 245 (778)
+|||++......... ......+...|++||.+.+.. ..++.++|+|||||++|+|++|..|+....
T Consensus 147 ~dfg~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~----~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~ 217 (290)
T cd05613 147 TDFGLSKEFHEDEVE-----RAYSFCGTIEYMAPDIVRGGD----GGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQ 217 (290)
T ss_pred eeCccceeccccccc-----ccccccCCcccCChhhccCCC----CCCCccccHHHHHHHHHHHhcCCCCCCcCCccccH
Confidence 999998776432111 111223455899999986521 235678999999999999999998874211
Q ss_pred --h-hc----c----CCCCcchHHHHHHHhccCCCCCC-----ChHHHHhcc
Q 004025 246 --L-RN----T----ASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENS 281 (778)
Q Consensus 246 --l-~~----~----~~iP~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~ 281 (778)
+ .. . ..++..+..++++||..+|..|+ ++.+++.|+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~ 269 (290)
T cd05613 218 AEISRRILKSEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHP 269 (290)
T ss_pred HHHHHHhhccCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCc
Confidence 0 00 1 12455678899999999999997 789999997
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-28 Score=255.78 Aligned_cols=235 Identities=15% Similarity=0.154 Sum_probs=174.0
Q ss_pred cCCCCCC-CceEEEEeEECC---CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCccc
Q 004025 25 DPYPSAW-GSWSHFQGTSKD---DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKI 100 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~---~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~ 100 (778)
+.||.|+ | +||+|.... ++..|+||.+.... .....+.+.+|+.+++.++||||+++++.+...+ .
T Consensus 1 ~~lg~g~~g--~v~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-------~ 70 (262)
T cd05058 1 RVIGKGHFG--CVYHGTLIDSDGQKIHCAVKSLNRIT-DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSE-------G 70 (262)
T ss_pred CcccccCCc--eEEEEEEecCCCceEEEEEEecCccC-CHHHHHHHHHHHHHHccCCCCCcceEEEEeecCC-------C
Confidence 3577887 7 899998653 34579999886432 2234567889999999999999999999765432 3
Q ss_pred EEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccc
Q 004025 101 TIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (778)
Q Consensus 101 ~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~ 178 (778)
..|+|+||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||+++.
T Consensus 71 ~~~lv~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlk~~nili~~~~~~kl~dfg~~~~ 147 (262)
T cd05058 71 SPLVVLPYMKHGDLRNFIRSETHN--PTVKDLIGFGLQVAKGMEYLAS-KKFVHRDLAARNCMLDESFTVKVADFGLARD 147 (262)
T ss_pred CcEEEEecCCCCCHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHh-CCccccccCcceEEEcCCCcEEECCcccccc
Confidence 678999999 5899998764322 1223344557899999999995 8999999999999999999999999999886
Q ss_pred cCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCC-CCCChhhh-----------
Q 004025 179 FDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM-RLSKTEEL----------- 246 (778)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~-~p~~~~~l----------- 246 (778)
+....... .........+..|+|||...+ ..++.++|+|||||++|||++|+ +++.....
T Consensus 148 ~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~ 219 (262)
T cd05058 148 IYDKEYYS--VHNHTGAKLPVKWMALESLQT------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGR 219 (262)
T ss_pred ccCCccee--ecccccCcCCccccChhHhcc------CccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCC
Confidence 64321100 000111122347999998765 35667999999999999999954 55542211
Q ss_pred --hccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 247 --RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 247 --~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
.....+|..+.+++.+||..+|..||++.++++.
T Consensus 220 ~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~ 255 (262)
T cd05058 220 RLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSR 255 (262)
T ss_pred CCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 0112367788999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.9e-28 Score=254.23 Aligned_cols=233 Identities=15% Similarity=0.157 Sum_probs=181.5
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.+|.|+ | .||+|.++ ++..++||.+...... ...+.+|++.+++++||||+++++.++..
T Consensus 5 ~~~~~~~ig~g~~g--~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 71 (256)
T cd05112 5 ELTLVQEIGSGQFG--LVWLGYWL-EKRKVAIKTIREGAMS---EEDFIEEAQVMMKLSHPKLVQLYGVCTER------- 71 (256)
T ss_pred HeEEEeeecCcccc--eEEEEEEe-CCCeEEEEECCCCCCC---HHHHHHHHHHHHhCCCCCeeeEEEEEccC-------
Confidence 689999999998 8 89999876 4778999998754332 23578899999999999999999998764
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|+|+||+ +.|.+++..... ....+.+...+.|++.||.|||+ .+++|+||+|+||+++.++.+||+|||++
T Consensus 72 -~~~~~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH~-~~i~h~dl~p~ni~i~~~~~~~l~d~g~~ 147 (256)
T cd05112 72 -SPICLVFEFMEHGCLSDYLRAQRG--KFSQETLLGMCLDVCEGMAYLES-SNVIHRDLAARNCLVGENQVVKVSDFGMT 147 (256)
T ss_pred -CceEEEEEcCCCCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHH-CCccccccccceEEEcCCCeEEECCCcce
Confidence 3789999999 468888875432 12344456668899999999995 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh----c---
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR----N--- 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~----~--- 248 (778)
.......... ......+..|++||++.+ ..++.++|+|||||++|||++ |..||...... .
T Consensus 148 ~~~~~~~~~~-----~~~~~~~~~~~aPe~~~~------~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~ 216 (256)
T cd05112 148 RFVLDDQYTS-----STGTKFPVKWSSPEVFSF------SKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINA 216 (256)
T ss_pred eecccCcccc-----cCCCccchhhcCHhHhcc------CCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhC
Confidence 7654321100 011122347999999875 356678999999999999998 78877533211 1
Q ss_pred ------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 249 ------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 249 ------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+..+.+++.+||+.+|.+||++.++++.
T Consensus 217 ~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 217 GFRLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred CCCCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 11246678899999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.6e-28 Score=256.17 Aligned_cols=245 Identities=11% Similarity=0.117 Sum_probs=183.2
Q ss_pred ceeccCCCCCC-CceEEEEeEECC---CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKD---DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~---~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
|.+.+.||.|+ | +||+|..+. ++..|+||++..+.......+.+.+|++.+++++||||+++++.+......+
T Consensus 1 ~~~~~~ig~g~~g--~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~- 77 (273)
T cd05074 1 FTLGRMLGKGEFG--SVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKG- 77 (273)
T ss_pred CcchhcccCCCCC--CEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCC-
Confidence 77889999998 8 899998654 4688999999866545555677889999999999999999999886532110
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcC---CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLE---GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~---~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
.....++++||+ ++|..++...... .......+..++.||+.||.|||+ .+++||||||+||+++.++.+||+
T Consensus 78 -~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~-~~i~H~dikp~nili~~~~~~kl~ 155 (273)
T cd05074 78 -RLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSS-KNFIHRDLAARNCMLNENMTVCVA 155 (273)
T ss_pred -cccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCEeecccchhhEEEcCCCCEEEC
Confidence 012457889998 5788776543211 112334456669999999999995 899999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh---
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR--- 247 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~--- 247 (778)
|||+++......... .......+..|++||.+.+ ..++.++|+|||||++|+|++ |.+++......
T Consensus 156 dfg~~~~~~~~~~~~----~~~~~~~~~~~~~pe~~~~------~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~ 225 (273)
T cd05074 156 DFGLSKKIYSGDYYR----QGCASKLPVKWLALESLAD------NVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIY 225 (273)
T ss_pred cccccccccCCccee----cCCCccCchhhcCHhHHhc------CccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHH
Confidence 999988664321100 0111123347999998765 356678999999999999998 77776432111
Q ss_pred ----------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 ----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 ----------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....++..+.+++.+||+.+|..||++.++++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~ 268 (273)
T cd05074 226 NYLIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ 268 (273)
T ss_pred HHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 112456778999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.9e-28 Score=254.75 Aligned_cols=235 Identities=16% Similarity=0.174 Sum_probs=182.1
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
....|.+.+++|.|+ | .||.|... .+..|+||.+... ....+.+.+|+++++.++||||+++++.+.. .
T Consensus 4 ~~~~~~~~~~lg~g~~~--~vy~~~~~-~~~~~~iK~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~--- 73 (260)
T cd05073 4 PRESLKLEKKLGAGQFG--EVWMATYN-KHTKVAVKTMKPG---SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-E--- 73 (260)
T ss_pred cccceeEEeEecCccce--EEEEEEec-CCccEEEEecCCC---hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-C---
Confidence 456799999999998 7 89999865 5677999987643 2234568889999999999999999999875 2
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..|++|||+ ++|.+++...... ......+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+||
T Consensus 74 -----~~~~v~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~l~~aL~~lH~-~~i~H~dl~p~ni~i~~~~~~~l~d~ 146 (260)
T cd05073 74 -----PIYIITEFMAKGSLLDFLKSDEGS-KQPLPKLIDFSAQIAEGMAFIEQ-RNYIHRDLRAANILVSASLVCKIADF 146 (260)
T ss_pred -----CeEEEEEeCCCCcHHHHHHhCCcc-ccCHHHHHHHHHHHHHHHHHHHh-CCccccccCcceEEEcCCCcEEECCC
Confidence 689999999 4799998764321 12223345558999999999995 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh---h--
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL---R-- 247 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l---~-- 247 (778)
|++..+...... .......+..|+|||++.+ ..++.++|+|||||++|++++ |..||..... .
T Consensus 147 ~~~~~~~~~~~~-----~~~~~~~~~~y~~PE~~~~------~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~ 215 (260)
T cd05073 147 GLARVIEDNEYT-----AREGAKFPIKWTAPEAINF------GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA 215 (260)
T ss_pred cceeeccCCCcc-----cccCCcccccccCHhHhcc------CCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 998776432110 0111122347999999876 356778999999999999998 7777753211 0
Q ss_pred --------ccCCCCcchHHHHHHHhccCCCCCCChHHHHh
Q 004025 248 --------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 248 --------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
....+|..+.+++.+|+..+|.+||++.++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 216 LERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred HhCCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 12346678999999999999999999988765
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-28 Score=255.32 Aligned_cols=228 Identities=19% Similarity=0.214 Sum_probs=179.6
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.+|.|+ | .||.|.. +++.|+||.+.... ..+.+.+|+..++.++||||+++++.+..+
T Consensus 6 ~~~~~~~~lg~g~~g--~v~~~~~--~~~~~~iK~~~~~~----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------ 71 (254)
T cd05083 6 QKLTLGEIIGEGEFG--AVLQGEY--TGQKVAVKNIKCDV----TAQAFLEETAVMTKLHHKNLVRLLGVILHN------ 71 (254)
T ss_pred HHceeeeeeccCCCC--ceEeccc--CCCceEEEeecCcc----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC------
Confidence 4599999999998 8 8999864 68899999986432 234678999999999999999999988642
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..|+||||+ ++|.+++....... .....+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||+
T Consensus 72 ---~~~~v~e~~~~~~L~~~l~~~~~~~-~~~~~~~~~~~qi~~al~~lH~-~~~~H~dl~p~nili~~~~~~kl~Dfg~ 146 (254)
T cd05083 72 ---GLYIVMELMSKGNLVNFLRTRGRAL-VSVIQLLQFSLDVAEGMEYLES-KKLVHRDLAARNILVSEDGVAKVSDFGL 146 (254)
T ss_pred ---CcEEEEECCCCCCHHHHHHhcCcCC-CCHHHHHHHHHHHHHHHHHHHh-CCeeccccCcceEEEcCCCcEEECCCcc
Confidence 479999999 58999987654222 2233345568999999999995 9999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh-------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR------- 247 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~------- 247 (778)
+........ ....+..|+|||.+.++ .++.+.|+|||||++|+|++ |.+||......
T Consensus 147 ~~~~~~~~~---------~~~~~~~y~~pe~~~~~------~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~ 211 (254)
T cd05083 147 ARVGSMGVD---------NSKLPVKWTAPEALKHK------KFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVE 211 (254)
T ss_pred ceeccccCC---------CCCCCceecCHHHhccC------CcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHh
Confidence 876432110 11223479999988753 56678999999999999997 88777532211
Q ss_pred ------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 ------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 ------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+|..+.+++.+||+.+|..||++.++++.
T Consensus 212 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 250 (254)
T cd05083 212 KGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREK 250 (254)
T ss_pred CCCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 113466778999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=99.96 E-value=7e-28 Score=254.45 Aligned_cols=238 Identities=16% Similarity=0.247 Sum_probs=184.6
Q ss_pred CceeccCCCCCC-CceEEEEeEECC-CCCcEEEEEEeCCC--------CchhHHHHHHHHHHHHhc-CCCCCeeeEeeee
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKD-DGSPVSIFSISGTN--------AQDGHLAAARNGVKRLRT-VRHPNILAFLHST 88 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~-~g~~VaIK~~~~~~--------~~~~~~~~~~~ev~~Lk~-LrHPnIlk~~d~~ 88 (778)
.|++.+.||.|. | .||.|..+. .++.++||.+.... ..+.....+.+|+..+++ ++||||+++++.+
T Consensus 1 ~y~~~~~ig~G~~~--~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~ 78 (269)
T cd08528 1 EYAVLEHLGSGAFG--CVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTF 78 (269)
T ss_pred CchhhhhhcCCCCc--eEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeE
Confidence 489999999998 8 899999987 67899999886432 122344556778887765 7999999999999
Q ss_pred EecccccCCcccEEEEEecCC--cChHHHHHHhCc-CCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC
Q 004025 89 EVENIDATSTKITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT 165 (778)
Q Consensus 89 e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~ 165 (778)
+.+ ..+|+||||+ ++|.+++..... ........+...+.|++.+|.|||+..+++|+||+|+||+++.+
T Consensus 79 ~~~--------~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~ 150 (269)
T cd08528 79 LEN--------DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGED 150 (269)
T ss_pred ccC--------CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCC
Confidence 864 3899999999 478888765321 11223344556689999999999954689999999999999999
Q ss_pred CcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh
Q 004025 166 LDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE 245 (778)
Q Consensus 166 g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~ 245 (778)
+.+||+|||++....... ......++..|++||.+.+. .++.++|+||||+++|+|++|.+||....
T Consensus 151 ~~~~l~dfg~~~~~~~~~-------~~~~~~~~~~~~~Pe~~~~~------~~~~~~Dv~slG~ll~~l~~g~~p~~~~~ 217 (269)
T cd08528 151 DKVTITDFGLAKQKQPES-------KLTSVVGTILYSCPEIVKNE------PYGEKADVWAFGCILYQMCTLQPPFYSTN 217 (269)
T ss_pred CcEEEecccceeeccccc-------ccccccCcccCcChhhhcCC------CCchHHHHHHHHHHHHHHHhCCCcccccC
Confidence 999999999998765421 11122345589999998763 46778999999999999999998876432
Q ss_pred hhc--------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 246 LRN--------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 246 l~~--------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
... ...++..+.+++++||..||..||++.++...
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 218 MLSLATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred HHHHHHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 210 11456778999999999999999999998764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.5e-28 Score=267.46 Aligned_cols=243 Identities=16% Similarity=0.196 Sum_probs=181.8
Q ss_pred CCCceeccCCCCCC-CceEEEEeEE-----CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEe
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTS-----KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEV 90 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~-----k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~ 90 (778)
..+|.+++.||.|+ | +||+|++ ..+++.|+||++...... .....+.+|+.+|+.+ +||||+++++++..
T Consensus 6 ~~~~~~~~~lG~G~fg--~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 82 (343)
T cd05103 6 RDRLKLGKPLGRGAFG--QVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRALMSELKILIHIGHHLNVVNLLGACTK 82 (343)
T ss_pred hhHhcccccccCCccc--eEEEEeeccCCccccceeEEEEEeccCCCh-HHHHHHHHHHHHHHhccCCccHhhhcceeec
Confidence 44699999999998 8 9999984 356789999999754322 3455688999999999 68999999998865
Q ss_pred cccccCCcccEEEEEecCC--cChHHHHHHhCcC----------------------------------------------
Q 004025 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLE---------------------------------------------- 122 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~---------------------------------------------- 122 (778)
. ...+|+||||| ++|.+++......
T Consensus 83 ~-------~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (343)
T cd05103 83 P-------GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEE 155 (343)
T ss_pred C-------CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCC
Confidence 3 24789999999 5799888653210
Q ss_pred ------------------CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCCCCC
Q 004025 123 ------------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNE 184 (778)
Q Consensus 123 ------------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~ 184 (778)
.......+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||++........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 234 (343)
T cd05103 156 KSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLAS-RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD 234 (343)
T ss_pred CccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCccCeEEEcCCCcEEEEecccccccccCcc
Confidence 001112234458899999999995 9999999999999999999999999999877543211
Q ss_pred CCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhh----h----hc------c
Q 004025 185 AANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE----L----RN------T 249 (778)
Q Consensus 185 ~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~----l----~~------~ 249 (778)
.. .......+..|+|||.+.+ ..++.++|+|||||++|+|++ |..|+.... . .. .
T Consensus 235 ~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 304 (343)
T cd05103 235 YV----RKGDARLPLKWMAPETIFD------RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 304 (343)
T ss_pred hh----hcCCCCCCcceECcHHhcC------CCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCC
Confidence 00 0001122346999999865 356789999999999999997 777764321 1 00 1
Q ss_pred CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 250 ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 250 ~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
..++..+.+++.+|+..+|.+||++.+++++-
T Consensus 305 ~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l 336 (343)
T cd05103 305 DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 336 (343)
T ss_pred CCCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 12445678889999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.8e-28 Score=256.64 Aligned_cols=225 Identities=17% Similarity=0.170 Sum_probs=175.7
Q ss_pred CceeccCC--CCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEeccccc
Q 004025 20 PYNIGDPY--PSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 20 ~Y~i~~~l--g~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~g 95 (778)
.|++.+.+ |.|. | .||.++++.++..+++|.+..+.... . |+.....+ +||||+++++.+..+
T Consensus 15 ~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~k~~~~~~~~~--~-----e~~~~~~~~~h~~iv~~~~~~~~~---- 81 (267)
T PHA03390 15 NCEIVKKLKLIDGKFG--KVSVLKHKPTQKLFVQKIIKAKNFNA--I-----EPMVHQLMKDNPNFIKLYYSVTTL---- 81 (267)
T ss_pred hhccccceeecCCCce--EEEEEEEcCCCcEEEEEEEehhhcch--h-----hHHHHHHhhcCCCEEEEEEEEecC----
Confidence 57777776 8887 8 99999999999999999997643221 1 12222222 699999999999874
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC-cEEEEe
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-DWKLHA 172 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g-~~KL~d 172 (778)
..+|+||||+ ++|.+++..... .....+..++.||++||.|||+ .+++||||+|+||+++.++ .++|+|
T Consensus 82 ----~~~~iv~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~nil~~~~~~~~~l~d 153 (267)
T PHA03390 82 ----KGHVLIMDYIKDGDLFDLLKKEGK---LSEAEVKKIIRQLVEALNDLHK-HNIIHNDIKLENVLYDRAKDRIYLCD 153 (267)
T ss_pred ----CeeEEEEEcCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeeeCCCCHHHEEEeCCCCeEEEec
Confidence 3899999999 579999877542 2334456669999999999995 8999999999999999988 999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-------
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE------- 245 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~------- 245 (778)
||++....... ...+...|+|||++.+ ..++.++|+|||||++|+|++|..||....
T Consensus 154 fg~~~~~~~~~----------~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~ 217 (267)
T PHA03390 154 YGLCKIIGTPS----------CYDGTLDYFSPEKIKG------HNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLE 217 (267)
T ss_pred CccceecCCCc----------cCCCCCcccChhhhcC------CCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHH
Confidence 99987664321 1123458999999876 356678999999999999999998875321
Q ss_pred -hh--------ccCCCCcchHHHHHHHhccCCCCCCC-hHHHHhcc
Q 004025 246 -LR--------NTASIPKSLLPDYQRLLSSMPSRRLN-SSKLIENS 281 (778)
Q Consensus 246 -l~--------~~~~iP~~L~~~i~~lL~~dP~~Rps-~~~lL~~~ 281 (778)
+. ....++..+.+++.+||+.+|.+|++ ++++++|+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~ 263 (267)
T PHA03390 218 SLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHP 263 (267)
T ss_pred HHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCC
Confidence 10 11236677889999999999999996 69999997
|
|
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.3e-28 Score=256.22 Aligned_cols=228 Identities=14% Similarity=0.183 Sum_probs=175.5
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHH---HHHHhcCCCCCeeeEeeeeEecccccCCcccE
Q 004025 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNG---VKRLRTVRHPNILAFLHSTEVENIDATSTKIT 101 (778)
Q Consensus 27 lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~e---v~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~ 101 (778)
||.|+ | .||+|.+..+++.|+||.+.++.... .......+| ++.++...||+|+++++.++.+ ..
T Consensus 2 ig~g~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------~~ 71 (278)
T cd05606 2 IGRGGFG--EVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP--------DK 71 (278)
T ss_pred cccCCCe--EEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecC--------CE
Confidence 56776 7 89999999999999999998653322 111223333 3455566899999999999864 38
Q ss_pred EEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccccc
Q 004025 102 IYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (778)
Q Consensus 102 lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~ 179 (778)
+|+||||+ ++|..++...+. .....+..++.|++.||.|||+ .+++||||+|+||+++.++.+||+|||++..+
T Consensus 72 ~~~v~e~~~g~~L~~~l~~~~~---l~~~~~~~~~~ql~~~l~~lH~-~~i~H~di~p~nili~~~~~~kl~dfg~~~~~ 147 (278)
T cd05606 72 LSFILDLMNGGDLHYHLSQHGV---FSEAEMRFYAAEIILGLEHMHN-RFVVYRDLKPANILLDEHGHVRISDLGLACDF 147 (278)
T ss_pred EEEEEecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCEEcCCCCHHHEEECCCCCEEEccCcCcccc
Confidence 99999999 468888865432 2344566779999999999995 89999999999999999999999999998765
Q ss_pred CCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh------hhc-----
Q 004025 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE------LRN----- 248 (778)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~------l~~----- 248 (778)
.... .....+...|+|||++.++ ..++.++|+|||||++|+|++|..||.... ...
T Consensus 148 ~~~~--------~~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 214 (278)
T cd05606 148 SKKK--------PHASVGTHGYMAPEVLQKG-----VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM 214 (278)
T ss_pred CccC--------CcCcCCCcCCcCcHHhcCC-----CCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhcc
Confidence 4321 1112345689999998653 246678999999999999999998885331 100
Q ss_pred ----cCCCCcchHHHHHHHhccCCCCCC-----ChHHHHhcc
Q 004025 249 ----TASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENS 281 (778)
Q Consensus 249 ----~~~iP~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~ 281 (778)
...++..+.+++.+||..+|..|+ ++.++++|+
T Consensus 215 ~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~ 256 (278)
T cd05606 215 AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHP 256 (278)
T ss_pred CCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCc
Confidence 123456788999999999999999 999999998
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-28 Score=261.11 Aligned_cols=232 Identities=19% Similarity=0.208 Sum_probs=184.2
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~ 99 (778)
|+...++|.|+ | .||.++.+.+|+.|+||++.... ......+.+|+..++.++||||+++++.+...
T Consensus 22 ~~~~~~lg~g~~g--~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-------- 89 (292)
T cd06657 22 LDNFIKIGEGSTG--IVCIATVKSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVG-------- 89 (292)
T ss_pred hhhHHHcCCCCCe--EEEEEEEcCCCeEEEEEEecccc--hhHHHHHHHHHHHHHhcCCcchhheeeEEEeC--------
Confidence 44445788887 8 89999999999999999986432 23456688999999999999999999999864
Q ss_pred cEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 100 ~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
.+.|+||||+ ++|.+++.... .....+..++.||+.||.|||+ .+++||||+|+||+++.+|.++|+|||++.
T Consensus 90 ~~~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~ql~~~l~~lH~-~givH~dl~p~Nilv~~~~~~~l~dfg~~~ 164 (292)
T cd06657 90 DELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLKALSVLHA-QGVIHRDIKSDSILLTHDGRVKLSDFGFCA 164 (292)
T ss_pred CEEEEEEecCCCCcHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECCCCCEEEcccccce
Confidence 4899999999 46887775433 2334466779999999999995 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-----------
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----------- 246 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----------- 246 (778)
........ .....+...|++||.+.+ ..++.++|+|||||++|+|++|..||.....
T Consensus 165 ~~~~~~~~------~~~~~~~~~y~~pE~~~~------~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~ 232 (292)
T cd06657 165 QVSKEVPR------RKSLVGTPYWMAPELISR------LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL 232 (292)
T ss_pred eccccccc------ccccccCccccCHHHhcC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhC
Confidence 65432110 011123457999998765 2456789999999999999999988753210
Q ss_pred ----hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 ----RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ----~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....+|..+.+++.+||..+|.+||++.++++|+
T Consensus 233 ~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~ 271 (292)
T cd06657 233 PPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHP 271 (292)
T ss_pred CcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcCh
Confidence 11234677889999999999999999999999997
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-28 Score=256.79 Aligned_cols=233 Identities=16% Similarity=0.199 Sum_probs=176.3
Q ss_pred CCCCCC-CceEEEEeEECCCC------CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 26 PYPSAW-GSWSHFQGTSKDDG------SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g------~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
.+|.|+ | .||.|+.+..+ ..|+||.+..... ......+.+|+.+++.++||||+++++++...
T Consensus 2 ~lg~g~~g--~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 71 (269)
T cd05044 2 FLGSGAFG--EVYEGTATDILGPGSGPIRVAVKTLRKGAT-DQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLN------- 71 (269)
T ss_pred ccccccce--eEEeeeecccccCcccceeehhhhhhcccc-hhhHHHHHHHHHHHHhcCCCCeeeEeeeecCC-------
Confidence 467776 7 89999986544 6899999865422 23355688899999999999999999998763
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcC----CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC-----c
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLE----GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-----D 167 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~----~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g-----~ 167 (778)
...|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++|+||+|+||+++.++ .
T Consensus 72 -~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~-~~i~H~dl~p~nil~~~~~~~~~~~ 149 (269)
T cd05044 72 -EPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQ-MHFIHRDLAARNCLVSEKGYDADRV 149 (269)
T ss_pred -CCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHh-CCcccCCCChheEEEecCCCCCCcc
Confidence 3789999999 5799998764321 112223355568999999999995 8999999999999999888 8
Q ss_pred EEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhh-
Q 004025 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE- 245 (778)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~- 245 (778)
+||+|||++........... ......+..|+|||.+.++ .++.++|+|||||++|||++ |..||....
T Consensus 150 ~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~il~ellt~g~~p~~~~~~ 219 (269)
T cd05044 150 VKIGDFGLARDIYKSDYYRK----EGEGLLPVRWMAPESLLDG------KFTTQSDVWSFGVLMWEILTLGQQPYPALNN 219 (269)
T ss_pred eEECCccccccccccccccc----CcccCCCccccCHHHHccC------CcccchhHHHHHHHHHHHHHcCCCCCcccCH
Confidence 99999999876643211000 0111234579999998763 46779999999999999998 887764321
Q ss_pred --h----------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 246 --L----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 246 --l----------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. .....+|..+.+++.+||..+|.+||++.++++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 266 (269)
T cd05044 220 QEVLQHVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEI 266 (269)
T ss_pred HHHHHHHhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 0 1123567788999999999999999999998764
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-28 Score=258.07 Aligned_cols=226 Identities=18% Similarity=0.220 Sum_probs=171.4
Q ss_pred cCCCCCC-CceEEEEeEECCCCCc-------EEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 25 DPYPSAW-GSWSHFQGTSKDDGSP-------VSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~g~~-------VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
+.||.|+ | .||+|.++.++.. |++|.+.... ....+.+.+|+.+++.+.||||+++++.+..+
T Consensus 1 ~~lg~G~~~--~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~----- 71 (258)
T cd05078 1 ESLGQGTFT--KIFKGIRREVGDYGELHKTEVLLKVLDKSH--RNYSESFFEAASMMSQLSHKHLVLNYGVCVCG----- 71 (258)
T ss_pred CCCCcccch--hheeeeecccccccccccchhhHHhhcchh--HHHHHHHHHHHHHHHhCCCCChhheeeEEEeC-----
Confidence 4678887 7 8999998765544 8888876432 23455678899999999999999999999863
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCc-------
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD------- 167 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~------- 167 (778)
...|+||||+ ++|..++..... ......+..++.||+.||.|||+ .+++||||||+||+++.++.
T Consensus 72 ---~~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~-~~iiH~dlkp~nili~~~~~~~~~~~~ 145 (258)
T cd05078 72 ---DESIMVQEYVKFGSLDTYLKKNKN--LINISWKLEVAKQLAWALHFLED-KGLTHGNVCAKNVLLIREEDRKTGNPP 145 (258)
T ss_pred ---CCcEEEEecCCCCcHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCccceEEEecccccccCCCc
Confidence 3789999999 479999876542 12334455569999999999995 99999999999999988776
Q ss_pred -EEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCC-CCCChhh
Q 004025 168 -WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM-RLSKTEE 245 (778)
Q Consensus 168 -~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~-~p~~~~~ 245 (778)
+||+|||++....... .......|+|||++.+. ..++.++|+|||||++|||++|. +++....
T Consensus 146 ~~~l~d~g~~~~~~~~~----------~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~ 210 (258)
T cd05078 146 FIKLSDPGISITVLPKE----------ILLERIPWVPPECIENP-----QNLSLAADKWSFGTTLWEIFSGGDKPLSALD 210 (258)
T ss_pred eEEecccccccccCCch----------hccccCCccCchhccCC-----CCCCchhhHHHHHHHHHHHHcCCCCChhhcc
Confidence 5899999876543211 11233479999998753 34567899999999999999985 4443211
Q ss_pred h-------hccCCCC----cchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 246 L-------RNTASIP----KSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 246 l-------~~~~~iP----~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. .....+| ..+.+++.+||+.+|.+||++.++++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 211 SQKKLQFYEDRHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred HHHHHHHHHccccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 1 1122333 457889999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.8e-28 Score=255.18 Aligned_cols=226 Identities=17% Similarity=0.185 Sum_probs=169.3
Q ss_pred cCCCCCC-CceEEEEeEECCC------------CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEec
Q 004025 25 DPYPSAW-GSWSHFQGTSKDD------------GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~------------g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e 91 (778)
+.+|.|. | +||+|+.... ...|+||++.... ......+.+|+.+++.++||||+++++++..+
T Consensus 1 ~~lg~G~~~--~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~ 76 (262)
T cd05077 1 EHLGRGTRT--QIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH--RDISLAFFETASMMRQVSHKHIVLLYGVCVRD 76 (262)
T ss_pred CccccCCcc--eEeeeecccCCCccccccchhhceeEEEeecChhh--hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence 3578887 7 9999986432 2358888876532 23345678889999999999999999998764
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCc--
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD-- 167 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~-- 167 (778)
...|+||||+ ++|..++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.
T Consensus 77 --------~~~~lv~e~~~~~~l~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~dlkp~Nill~~~~~~~ 145 (262)
T cd05077 77 --------VENIMVEEFVEFGPLDLFMHRKSD--VLTTPWKFKVAKQLASALSYLED-KDLVHGNVCTKNILLAREGIDG 145 (262)
T ss_pred --------CCCEEEEecccCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHhhh-CCeECCCCCcccEEEecCCccC
Confidence 3679999999 468777765332 12333455669999999999995 89999999999999987764
Q ss_pred -----EEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHH-hCCCCC
Q 004025 168 -----WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELF-SGMRLS 241 (778)
Q Consensus 168 -----~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~-tg~~p~ 241 (778)
+||+|||++....... ...++..|+|||.+..+ ..++.++|+|||||++|||+ +|..|+
T Consensus 146 ~~~~~~~l~d~g~~~~~~~~~----------~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~~l~el~~~~~~p~ 210 (262)
T cd05077 146 ECGPFIKLSDPGIPITVLSRQ----------ECVERIPWIAPECVEDS-----KNLSIAADKWSFGTTLWEICYNGEIPL 210 (262)
T ss_pred CCCceeEeCCCCCCccccCcc----------cccccccccChhhhcCC-----CCCCchhHHHHHHHHHHHHHhCCCCCC
Confidence 8999999886553311 11234579999987643 35678899999999999997 566666
Q ss_pred Chhhhh-----------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 242 KTEELR-----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 242 ~~~~l~-----------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
...... .....+..+.+++.+||+.+|.+||++.+++++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 211 KDKTLAEKERFYEGQCMLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred CCcchhHHHHHHhcCccCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 432211 112234668889999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.7e-28 Score=254.36 Aligned_cols=239 Identities=16% Similarity=0.206 Sum_probs=170.1
Q ss_pred cCCCCCC-CceEEEEeEECC--CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccE
Q 004025 25 DPYPSAW-GSWSHFQGTSKD--DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKIT 101 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~--~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~ 101 (778)
++||.|+ | +||.|+... ....++||.+.... .......+.+|+..++.++||||+++++.+... ..
T Consensus 1 ~~lg~G~fg--~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~--------~~ 69 (269)
T cd05042 1 DEIGNGWFG--KVLLGEAHRGMSKARVVVKELRASA-TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIES--------IP 69 (269)
T ss_pred CcCCccCCc--eEEEEEEecCCCCeEEEEeecCccC-ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCC--------Cc
Confidence 3578887 8 899997543 34578888775432 233445678899999999999999999998763 37
Q ss_pred EEEEecCC--cChHHHHHHhCcC--CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 102 IYIVTEPV--MPLSEKIKELGLE--GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 102 lyIVtE~v--~~L~~~L~~~~~~--~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
+|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||++.
T Consensus 70 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nill~~~~~~kl~dfg~~~ 148 (269)
T cd05042 70 YLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ-ADFIHSDLALRNCQLTADLSVKIGDYGLAL 148 (269)
T ss_pred eEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh-cCEecccccHhheEecCCCcEEEecccccc
Confidence 99999999 5899998775421 111234456669999999999995 899999999999999999999999999986
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCcccccccccc-ccCCCCCcchhHHHHHHHHHHHh-CCCCCChhh----hh----
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTA-VRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE----LR---- 247 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~-~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~----l~---- 247 (778)
......... .......+..|+|||+....... ....++.++|+|||||++|||++ |..||.... +.
T Consensus 149 ~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~ 224 (269)
T cd05042 149 EQYPEDYYI----TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVR 224 (269)
T ss_pred ccccchhee----ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhh
Confidence 543321100 01111234479999997542111 12345779999999999999998 566654221 11
Q ss_pred cc----------CCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 NT----------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 ~~----------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
.. ..++..+...+..|+ .+|.+||++.++++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~ 266 (269)
T cd05042 225 EQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHEL 266 (269)
T ss_pred ccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHH
Confidence 00 123444566677776 599999999998763
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.1e-28 Score=271.08 Aligned_cols=243 Identities=16% Similarity=0.160 Sum_probs=183.5
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEEC-----CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeee
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSK-----DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHST 88 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k-----~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~ 88 (778)
++..+|.+++.||.|+ | .||+|+++ ..+..|+||++...... ...+.+.+|+++|..+. ||||+++++.+
T Consensus 34 ~~~~~~~~~~~lG~G~fG--~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~-~~~~~~~~E~~~l~~l~~H~niv~~~~~~ 110 (401)
T cd05107 34 MPRDNLVLGRTLGSGAFG--RVVEATAHGLSHSQSTMKVAVKMLKSTARS-SEKQALMSELKIMSHLGPHLNIVNLLGAC 110 (401)
T ss_pred ecHHHeehhhhccCCCce--eEEEEEEcCCCCCCCceEEEEEecCCCCCh-hHHHHHHHHHHHHHhcCCCCCeEEEEEEE
Confidence 4555788999999998 8 89999964 34568999999764322 33456889999999997 99999999998
Q ss_pred EecccccCCcccEEEEEecCC--cChHHHHHHhCcC--------------------------------------------
Q 004025 89 EVENIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------------------------------------------- 122 (778)
Q Consensus 89 e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~-------------------------------------------- 122 (778)
..+ ..+||||||| ++|.++|......
T Consensus 111 ~~~--------~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (401)
T cd05107 111 TKG--------GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMS 182 (401)
T ss_pred ccC--------CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccC
Confidence 764 3799999999 6899998754210
Q ss_pred ---------------------------------------------------CCcchHHHHHHHHHHHHHHHHHHcCCCcc
Q 004025 123 ---------------------------------------------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLV 151 (778)
Q Consensus 123 ---------------------------------------------------~~~~~~~i~~gl~QI~~aL~fLH~~~~iv 151 (778)
.......+..++.||+.||.|||+ .+++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~iv 261 (401)
T cd05107 183 KDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS-KNCV 261 (401)
T ss_pred CccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc-CCcC
Confidence 000111234457899999999995 8999
Q ss_pred ccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHH
Q 004025 152 HGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLI 231 (778)
Q Consensus 152 H~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~li 231 (778)
||||||+||+++.++.+||+|||+++......... ......++..|++||.+.+ ..+..++|+|||||++
T Consensus 262 Hrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslGvil 331 (401)
T cd05107 262 HRDLAARNVLICEGKLVKICDFGLARDIMRDSNYI----SKGSTFLPLKWMAPESIFN------NLYTTLSDVWSFGILL 331 (401)
T ss_pred cccCCcceEEEeCCCEEEEEecCcceecccccccc----cCCCcCCCCceeChHHhcC------CCCCcHhHHHHHHHHH
Confidence 99999999999999999999999988654321100 0111123457999999875 3466789999999999
Q ss_pred HHHHh-CCCCCChhh----h----h------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 232 YELFS-GMRLSKTEE----L----R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 232 yel~t-g~~p~~~~~----l----~------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
|||++ |+.||.... . . ....++..+.+++.+|+..+|..||++.++++.
T Consensus 332 ~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 332 WEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred HHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 99998 777764311 0 0 012345678899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=258.36 Aligned_cols=239 Identities=17% Similarity=0.187 Sum_probs=181.6
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCC----cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGS----PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~----~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~ 92 (778)
...|++.+.||.|+ | .||+|+++.+|. .|++|.+..... ......+.+|+.+++.++||||+++++.+...
T Consensus 6 ~~~~~~~~~lg~G~~g--~vy~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~- 81 (303)
T cd05110 6 ETELKRVKVLGSGAFG--TVYKGIWVPEGETVKIPVAIKILNETTG-PKANVEFMDEALIMASMDHPHLVRLLGVCLSP- 81 (303)
T ss_pred hhhceeccccccCCCc--cEEEEEEecCCCcceeeEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-
Confidence 45688999999998 8 899999988876 468888764322 23334578999999999999999999988642
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEE
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
..++++||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.++.+||
T Consensus 82 --------~~~~v~e~~~~g~l~~~~~~~~~~--~~~~~~~~~~~qi~~~L~~LH~-~~ivH~dikp~Nill~~~~~~kL 150 (303)
T cd05110 82 --------TIQLVTQLMPHGCLLDYVHEHKDN--IGSQLLLNWCVQIAKGMMYLEE-RRLVHRDLAARNVLVKSPNHVKI 150 (303)
T ss_pred --------CceeeehhcCCCCHHHHHHhcccC--CCHHHHHHHHHHHHHHHHHHhh-cCeeccccccceeeecCCCceEE
Confidence 467899999 5798888764321 1233455568999999999995 89999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhh---h
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE---L 246 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~---l 246 (778)
+|||+++.+...... ........+..|++||++.+ ..++.++|+|||||++||+++ |+.|+.... .
T Consensus 151 ~Dfg~~~~~~~~~~~----~~~~~~~~~~~y~~PE~~~~------~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~ 220 (303)
T cd05110 151 TDFGLARLLEGDEKE----YNADGGKMPIKWMALECIHY------RKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREI 220 (303)
T ss_pred ccccccccccCcccc----cccCCCccccccCCHHHhcc------CCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 999999876542211 11111223458999999875 356788999999999999997 777764321 1
Q ss_pred h----c------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 R----N------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ~----~------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. . ....+..+..++.+|+..+|..||++.++++..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l 265 (303)
T cd05110 221 PDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEF 265 (303)
T ss_pred HHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 1 0 112345678889999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-28 Score=246.84 Aligned_cols=238 Identities=15% Similarity=0.154 Sum_probs=186.0
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecccccCCc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~g~~~ 98 (778)
.++...+|.|. | +|++++.+++|...|||.+.+..+.+ ..+++...+.++.... .|+|++++++|..+.
T Consensus 94 l~~l~dlGsGtcG--~V~k~~~rs~~~iiAVK~M~rt~Nke-e~kRILmDldvv~~s~dcpyIV~c~GyFi~n~------ 164 (391)
T KOG0983|consen 94 LENLGDLGSGTCG--QVWKMRFRSTGHIIAVKQMRRTGNKE-ENKRILMDLDVVLKSHDCPYIVQCFGYFITNT------ 164 (391)
T ss_pred hhhHHhhcCCCcc--ceEEEEEcccceEEEEEeecccCCHH-HHHHHHHhhhHHhhccCCCeeeeeeeEEeeCc------
Confidence 44556788888 8 99999999999999999998765444 4556777777665554 899999999999854
Q ss_pred ccEEEEEecCCcC-hHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 99 KITIYIVTEPVMP-LSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 99 ~~~lyIVtE~v~~-L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
.++|.||.+.. +..+++.... ...+.++-.+...+++||.||..+.+++||||||+||++++.|++||||||++.
T Consensus 165 --dV~IcMelMs~C~ekLlkrik~--piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsG 240 (391)
T KOG0983|consen 165 --DVFICMELMSTCAEKLLKRIKG--PIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISG 240 (391)
T ss_pred --hHHHHHHHHHHHHHHHHHHhcC--CchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccc
Confidence 78999999854 5555554322 123344555688999999999998999999999999999999999999999998
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-----h----hc
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-----L----RN 248 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-----l----~~ 248 (778)
.+.+.. .+....+-..||+||.+...- +..|+..+|+||||+.++||.+|+.||.... + .+
T Consensus 241 rlvdSk-------AhtrsAGC~~YMaPERidp~~---~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ 310 (391)
T KOG0983|consen 241 RLVDSK-------AHTRSAGCAAYMAPERIDPPD---KPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNE 310 (391)
T ss_pred eeeccc-------ccccccCCccccCccccCCCC---CCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhc
Confidence 886632 122234445899999986531 2467789999999999999999999886421 1 11
Q ss_pred -------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
-..+++.+.+++..||..|+.+||...++|+|+
T Consensus 311 ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~ 350 (391)
T KOG0983|consen 311 EPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHP 350 (391)
T ss_pred CCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCc
Confidence 123556678889999999999999999999998
|
|
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.1e-28 Score=252.67 Aligned_cols=238 Identities=18% Similarity=0.238 Sum_probs=182.9
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC---chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA---QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~---~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
+|.+.+.||.|+ | +||++++...+..+.+|++..... .......+..|+.+++.++||||+++++.+...
T Consensus 1 ~y~i~~~ig~g~~g--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---- 74 (260)
T cd08222 1 RYILQQRLGKGSFG--TVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLER---- 74 (260)
T ss_pred CceeeeeecCCCCc--eEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcC----
Confidence 589999999998 8 899999988877787777664221 122334567889999999999999999998763
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcC-CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLE-GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~-~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
...|+|+||+ ++|..++...... .......+..++.|++.||.|||+ .+++|+||+|+||+++. +.+||+|
T Consensus 75 ----~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~-~~i~h~~l~~~nili~~-~~~~l~d 148 (260)
T cd08222 75 ----DAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQ-RRILHRDLKAKNIFLKN-NLLKIGD 148 (260)
T ss_pred ----CceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH-cCccccCCChhheEeec-CCEeecc
Confidence 3789999999 4788887653221 222344456669999999999995 89999999999999975 6799999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN---- 248 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~---- 248 (778)
||++.......... ....+...|++||...+ ..++.++|+||||+++|+|++|..++.......
T Consensus 149 ~g~~~~~~~~~~~~------~~~~~~~~~~~pe~~~~------~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~ 216 (260)
T cd08222 149 FGVSRLLMGSCDLA------TTFTGTPYYMSPEALKH------QGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLR 216 (260)
T ss_pred cCceeecCCCcccc------cCCCCCcCccCHHHHcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHH
Confidence 99987764422111 11123457999998765 345678999999999999999998876432211
Q ss_pred ---------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ---------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ---------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+|..+.+++.+||..+|.+||++.++++|+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 258 (260)
T cd08222 217 IVEGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNP 258 (260)
T ss_pred HHcCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCC
Confidence 123556788899999999999999999999998
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-29 Score=297.81 Aligned_cols=245 Identities=18% Similarity=0.279 Sum_probs=199.3
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
.+++.-+..+|.|. | .||.|...++|+..|+|.+..........+.+.+|.++|..|+|||+++|+++-..
T Consensus 1234 ~~rWqrg~~Ig~G~fG--~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvH------ 1305 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFG--KVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVH------ 1305 (1509)
T ss_pred eeeeccccccCCccee--eeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeec------
Confidence 46788888899988 8 99999999999999999998765555667889999999999999999999998655
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
...+||.|||| +.|.+.++..+... +...+|+..|++.||.|||+ .+||||||||.|||++.+|.+|++|||
T Consensus 1306 --Rekv~IFMEyC~~GsLa~ll~~gri~d---E~vt~vyt~qll~gla~LH~-~gIVHRDIK~aNI~Ld~~g~iK~~DFG 1379 (1509)
T KOG4645|consen 1306 --REKVYIFMEYCEGGSLASLLEHGRIED---EMVTRVYTKQLLEGLAYLHE-HGIVHRDIKPANILLDFNGLIKYGDFG 1379 (1509)
T ss_pred --HHHHHHHHHHhccCcHHHHHHhcchhh---hhHHHHHHHHHHHHHHHHHh-cCceecCCCccceeeecCCcEEeeccc
Confidence 34799999999 67998887755322 33467889999999999996 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh---------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE--------- 245 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~--------- 245 (778)
.+..+...-....+.+ ....+++.|||||++.+.-. ++..-+.|||||||++.||.+|+.|+..-+
T Consensus 1380 sa~ki~~~~~~~~~el--~~~~GT~~YMAPEvit~t~~---kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V 1454 (1509)
T KOG4645|consen 1380 SAVKIKNNAQTMPGEL--QSMMGTPMYMAPEVITGTKG---KGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHV 1454 (1509)
T ss_pred ceeEecCchhcCCHHH--HhhcCCchhcCchhhccccc---CCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHH
Confidence 9988876421111111 23466779999999986421 456679999999999999999998874211
Q ss_pred -hhccCCCCcch----HHHHHHHhccCCCCCCChHHHHhcc
Q 004025 246 -LRNTASIPKSL----LPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 246 -l~~~~~iP~~L----~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....++|..+ ++.+.+||..||++|.++.++++|.
T Consensus 1455 ~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~ 1495 (1509)
T KOG4645|consen 1455 AAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHA 1495 (1509)
T ss_pred hccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhh
Confidence 12345677665 5668999999999999999999986
|
|
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3e-27 Score=250.04 Aligned_cols=238 Identities=15% Similarity=0.181 Sum_probs=171.3
Q ss_pred CCCCCC-CceEEEEeEECC--CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEE
Q 004025 26 PYPSAW-GSWSHFQGTSKD--DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~--~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~l 102 (778)
.||.|+ | .||+|+... ++..+++|.+...... .....+.+|+..++.++||||+++++.+... ..+
T Consensus 2 ~lg~G~~g--~Vy~~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--------~~~ 70 (269)
T cd05087 2 EIGNGWFG--KVILGEVNSGYTPAQVVVKELRVSASV-QEQMKFLEEAQPYRSLQHSNLLQCLGQCTEV--------TPY 70 (269)
T ss_pred cccccCCc--eEEEEEEcCCCCceEEEEEecCCCCCh-HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC--------CCc
Confidence 578887 7 899998653 4567999988754332 2334688899999999999999999988753 378
Q ss_pred EEEecCC--cChHHHHHHhCcCC--CcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccc
Q 004025 103 YIVTEPV--MPLSEKIKELGLEG--SQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (778)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~--~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~ 178 (778)
|+||||+ ++|.+++....... ......+..++.||+.||.|||+ .+++|+||||+||+++.++.+||+|||++..
T Consensus 71 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~ 149 (269)
T cd05087 71 LLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK-NNFIHSDLALRNCLLTADLTVKIGDYGLSHN 149 (269)
T ss_pred EEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH-CCEeccccCcceEEEcCCCcEEECCcccccc
Confidence 9999999 57999987643211 11223345568899999999995 8999999999999999999999999999875
Q ss_pred cCCCCCCCCCCccccccccCCCCCCccccccccc-cccCCCCCcchhHHHHHHHHHHHh-CCCCCChh---hh-----hc
Q 004025 179 FDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWT-AVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTE---EL-----RN 248 (778)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~-~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~---~l-----~~ 248 (778)
...... ........++..|+|||++.+... .....++.++|+|||||++|||++ |..||... +. ..
T Consensus 150 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~ 225 (269)
T cd05087 150 KYKEDY----YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVRE 225 (269)
T ss_pred ccCcce----eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhc
Confidence 433211 000111233457999999864211 011235678999999999999996 88777421 10 00
Q ss_pred -c---------CCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 249 -T---------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 249 -~---------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. ...++.+..++++|+ .+|.+||++++++..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~ 266 (269)
T cd05087 226 QQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLL 266 (269)
T ss_pred ccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHH
Confidence 0 123455677888888 689999999998753
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=8e-29 Score=254.50 Aligned_cols=240 Identities=15% Similarity=0.191 Sum_probs=190.4
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
+-..+|++.+.+|.|. | +|..++.|.+++.+|||++.+...-. ........|-++|+..+||.+..+-.+|.+.
T Consensus 165 vTm~dFdfLKvLGkGTFG--KVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~-- 240 (516)
T KOG0690|consen 165 VTMEDFDFLKVLGKGTFG--KVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQ-- 240 (516)
T ss_pred eccchhhHHHHhcCCccc--eEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccC--
Confidence 4456889999999999 9 99999999999999999998754322 3345566788999999999999998889874
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
.++|+||||+ +.|..+|.+........ -..+...|+.||.|||+ .+||+||||.+|.+++.+|++||.
T Consensus 241 ------drlCFVMeyanGGeLf~HLsrer~FsE~R---tRFYGaEIvsAL~YLHs-~~ivYRDlKLENLlLDkDGHIKit 310 (516)
T KOG0690|consen 241 ------DRLCFVMEYANGGELFFHLSRERVFSEDR---TRFYGAEIVSALGYLHS-RNIVYRDLKLENLLLDKDGHIKIT 310 (516)
T ss_pred ------ceEEEEEEEccCceEeeehhhhhcccchh---hhhhhHHHHHHhhhhhh-CCeeeeechhhhheeccCCceEee
Confidence 4899999999 56888887755332222 33448899999999996 899999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-----
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----- 246 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----- 246 (778)
|||+|..--..+ -....+++++.|.|||++.. ..|..++|+|++|++||||++|+.||...+-
T Consensus 311 DFGLCKE~I~~g------~t~kTFCGTPEYLAPEVleD------nDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFe 378 (516)
T KOG0690|consen 311 DFGLCKEEIKYG------DTTKTFCGTPEYLAPEVLED------NDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFE 378 (516)
T ss_pred ecccchhccccc------ceeccccCChhhcCchhhcc------ccccceeehhhhhHHHHHHHhccCcccccchhHHHH
Confidence 999998644321 12344677889999999987 4788999999999999999999988754321
Q ss_pred -------hccCCCCcchHHHHHHHhccCCCCCCC-----hHHHHhcc
Q 004025 247 -------RNTASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENS 281 (778)
Q Consensus 247 -------~~~~~iP~~L~~~i~~lL~~dP~~Rps-----~~~lL~~~ 281 (778)
+-...+.+....++..||..+|++|+. +.++.+|.
T Consensus 379 LIl~ed~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~ 425 (516)
T KOG0690|consen 379 LILMEDLKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHR 425 (516)
T ss_pred HHHhhhccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhh
Confidence 112344455667788899999999985 45666664
|
|
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=255.62 Aligned_cols=239 Identities=15% Similarity=0.237 Sum_probs=182.7
Q ss_pred CceeccCCCCCC-CceEEEEeEEC---CCCCcEEEEEEeCCCCc--hhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSK---DDGSPVSIFSISGTNAQ--DGHLAAARNGVKRLRTVR-HPNILAFLHSTEVEN 92 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k---~~g~~VaIK~~~~~~~~--~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~ 92 (778)
+|++.+.+|.|+ | .||.+++. .+++.|+||++.+.... ....+.+.+|++++++++ ||||+++++.++..
T Consensus 1 ~~~~~~~ig~G~~~--~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~- 77 (288)
T cd05583 1 NFELLRVLGTGAYG--KVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTD- 77 (288)
T ss_pred CceEEEEeccCCCc--eEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecC-
Confidence 489999999998 8 89988754 46789999999753221 234556789999999994 99999999999763
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEE
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
..+|+||||+ ++|.+++..... .....+..++.|++.+|.|||+ .+++||||+|.||+++.++.+||
T Consensus 78 -------~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~ql~~~l~~lH~-~~~~H~dl~p~nil~~~~~~~~l 146 (288)
T cd05583 78 -------TKLHLILDYVNGGELFTHLYQREH---FTESEVRVYIAEIVLALDHLHQ-LGIIYRDIKLENILLDSEGHVVL 146 (288)
T ss_pred -------CEEEEEEecCCCCcHHHHHhhcCC---cCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHeEECCCCCEEE
Confidence 3899999999 478888765432 2233455668899999999995 89999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-----
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----- 245 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----- 245 (778)
+|||++..+...... ......+...|++||...+.. ...+.++|+||||+++|||++|..|+....
T Consensus 147 ~dfg~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~----~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~ 217 (288)
T cd05583 147 TDFGLSKEFLAEEEE-----RAYSFCGTIEYMAPEVIRGGS----GGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQ 217 (288)
T ss_pred EECcccccccccccc-----ccccccCCccccCHHHhcCCC----CCCcchhhhHHHHHHHHHHHhCCCCcccCcccchH
Confidence 999998765432111 111123455899999976531 235678999999999999999998874211
Q ss_pred --h-----hc----cCCCCcchHHHHHHHhccCCCCCCC---hHHHHhcc
Q 004025 246 --L-----RN----TASIPKSLLPDYQRLLSSMPSRRLN---SSKLIENS 281 (778)
Q Consensus 246 --l-----~~----~~~iP~~L~~~i~~lL~~dP~~Rps---~~~lL~~~ 281 (778)
+ .. ...++..+.+++.+||+.+|..||+ +.++++|+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 218 SEISRRILKSKPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred HHHHHHHHccCCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 0 01 1235667888999999999999998 46778887
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.1e-27 Score=251.35 Aligned_cols=248 Identities=10% Similarity=0.041 Sum_probs=180.1
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCC---CCcEEEEEEeCCCCchhH---------HHHHHHHHHHHhcCCCCCee
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDD---GSPVSIFSISGTNAQDGH---------LAAARNGVKRLRTVRHPNIL 82 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~---g~~VaIK~~~~~~~~~~~---------~~~~~~ev~~Lk~LrHPnIl 82 (778)
+....|.+.+.||.|+ | +||+|.++.+ +..+++|+.......-.. ......++..++.+.|+||+
T Consensus 9 i~~~~y~i~~~LG~G~fG--~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~ 86 (294)
T PHA02882 9 ITGKEWKIDKLIGCGGFG--CVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIP 86 (294)
T ss_pred cCCCceEEeeEEecCCCc--eEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCC
Confidence 3456899999999999 9 9999999887 667778765433221100 01122344556778899999
Q ss_pred eEeeeeEecccccCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeE
Q 004025 83 AFLHSTEVENIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVV 161 (778)
Q Consensus 83 k~~d~~e~e~~~g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~ 161 (778)
+++++....... ..+.|+++|++ ..+.+.++..... ....+..++.||+.||.|||+ .+++||||||+||+
T Consensus 87 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~qi~~~l~~lH~-~~iiHrDiKp~Nil 158 (294)
T PHA02882 87 KYYGCGSFKRCR----MYYRFILLEKLVENTKEIFKRIKCK---NKKLIKNIMKDMLTTLEYIHE-HGISHGDIKPENIM 158 (294)
T ss_pred cEEEeeeEecCC----ceEEEEEEehhccCHHHHHHhhccC---CHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEE
Confidence 999977654311 23568899988 4566666553211 234466779999999999995 89999999999999
Q ss_pred EcCCCcEEEEecccccccCCCCCCCCCC-ccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCC
Q 004025 162 VTQTLDWKLHAFDVLSEFDGNNEAANGP-MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL 240 (778)
Q Consensus 162 v~~~g~~KL~dFgla~~~~~~~~~~~~~-~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p 240 (778)
++.++.+||+|||+++.+.......... .......++..|+|||+..+ ..++.++|+|||||++|||++|..|
T Consensus 159 l~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~------~~~~~~~DiwSlG~~l~el~~g~~P 232 (294)
T PHA02882 159 VDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNG------ACVTRRGDLESLGYCMLKWAGIKLP 232 (294)
T ss_pred EcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCC------CCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999999998765322111000 00111235568999999876 3577899999999999999999999
Q ss_pred CChhh-------------hh-------ccCCCCcchHHHHHHHhccCCCCCCChHHHHh
Q 004025 241 SKTEE-------------LR-------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 241 ~~~~~-------------l~-------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
|.... .. .+...|+.+.+.++.|+..+|.+||+.+++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 233 WKGFGHNGNLIHAAKCDFIKRLHEGKIKIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred CCccccchHHHHHhHHHHHHHhhhhhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 85321 01 12456788999999999999999999999875
|
|
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-27 Score=247.28 Aligned_cols=225 Identities=16% Similarity=0.164 Sum_probs=170.5
Q ss_pred cCCCCCC-CceEEEEeEECCCC----------CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 25 DPYPSAW-GSWSHFQGTSKDDG----------SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~g----------~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
+.||.|+ | .||+|+++.++ ..|++|.+..... ....+.+|+.+|+.++||||+++++.+.. .
T Consensus 1 ~~lg~G~~~--~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~- 73 (259)
T cd05037 1 EHLGQGTFT--NIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR---DSLAFFETASLMSQLSHKHLVKLYGVCVR-D- 73 (259)
T ss_pred Ccccccccc--eEEEEEEeccCCccccCCccceeeeeeccccchh---hHHHHHHHHHHHHcCCCcchhheeeEEec-C-
Confidence 4578887 7 89999998776 3577887664321 15678899999999999999999998875 2
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC-----
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL----- 166 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g----- 166 (778)
..|+|+||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.++
T Consensus 74 -------~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dlkp~Nill~~~~~~~~~ 143 (259)
T cd05037 74 -------ENIMVEEYVKFGPLDVFLHREKN--NVSLHWKLDVAKQLASALHYLED-KKLVHGNVCGKNILVARYGLNEGY 143 (259)
T ss_pred -------CcEEEEEcCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhh-CCeecccCccceEEEecCccccCC
Confidence 469999999 579999887542 12233455668999999999995 9999999999999999888
Q ss_pred --cEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhC-CCCCCh
Q 004025 167 --DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG-MRLSKT 243 (778)
Q Consensus 167 --~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg-~~p~~~ 243 (778)
.+||+|||++....... .......|++||++.+.- ..++.++|+|||||++|+|++| ..++..
T Consensus 144 ~~~~kl~Dfg~a~~~~~~~----------~~~~~~~y~aPE~~~~~~----~~~~~~~Di~slG~~~~~l~~~~~~p~~~ 209 (259)
T cd05037 144 VPFIKLSDPGIPITVLSRE----------ERVERIPWIAPECIRNGQ----ASLTIAADKWSFGTTLLEICSNGEEPLST 209 (259)
T ss_pred ceeEEeCCCCccccccccc----------ccccCCCccChhhhcCCC----CCcchhhHHHHHHHHHHHHHhCCCCCccc
Confidence 79999999988754311 112334799999987521 2567789999999999999995 455432
Q ss_pred hhh-------hccC--CC--CcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 244 EEL-------RNTA--SI--PKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 244 ~~l-------~~~~--~i--P~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
... .... .. ...+.+++.+||..+|.+||++.++++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 257 (259)
T cd05037 210 LSSSEKERFYQDQHRLPMPDCAELANLINQCWTYDPTKRPSFRAILRD 257 (259)
T ss_pred CCchhHHHHHhcCCCCCCCCchHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 211 0011 11 2467888999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.3e-27 Score=250.37 Aligned_cols=225 Identities=17% Similarity=0.149 Sum_probs=166.4
Q ss_pred CCCCCC-CceEEEEeEECCC------------------------CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCC
Q 004025 26 PYPSAW-GSWSHFQGTSKDD------------------------GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPN 80 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~------------------------g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPn 80 (778)
.||+|+ | .||+|+...+ ...|+||++.... ......+.+|+.+++.++|||
T Consensus 2 ~lG~G~~~--~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~n 77 (274)
T cd05076 2 HLGQGTRT--NIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH--RDIALAFFETASLMSQVSHIH 77 (274)
T ss_pred CcCccccc--ceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH--HHHHHHHHHHHHHHhcCCCCC
Confidence 578887 7 8999875322 1358888886432 223456778899999999999
Q ss_pred eeeEeeeeEecccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCC
Q 004025 81 ILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLS 158 (778)
Q Consensus 81 Ilk~~d~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~ 158 (778)
|+++++++..+ ...|+||||+ ++|..++..... .........++.||+.||.|||+ .+++||||||+
T Consensus 78 iv~~~~~~~~~--------~~~~lv~ey~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~-~~iiH~dlkp~ 146 (274)
T cd05076 78 LAFVHGVCVRG--------SENIMVEEFVEHGPLDVCLRKEKG--RVPVAWKITVAQQLASALSYLED-KNLVHGNVCAK 146 (274)
T ss_pred eeeEEEEEEeC--------CceEEEEecCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHc-CCccCCCCCcc
Confidence 99999998764 3789999999 478888765321 12234455669999999999995 89999999999
Q ss_pred CeEEcCCC-------cEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHH
Q 004025 159 SVVVTQTL-------DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLI 231 (778)
Q Consensus 159 NI~v~~~g-------~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~li 231 (778)
||+++..| .+||+|||++....... ....+..|+|||.+.+. ..++.++|+|||||++
T Consensus 147 Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~~----------~~~~~~~~~aPe~~~~~-----~~~~~~~Dv~slG~~l 211 (274)
T cd05076 147 NILLARLGLAEGTSPFIKLSDPGVSFTALSRE----------ERVERIPWIAPECVPGG-----NSLSTAADKWSFGTTL 211 (274)
T ss_pred cEEEeccCcccCccceeeecCCcccccccccc----------ccccCCcccCchhhcCC-----CCCCcHHHHHHHHHHH
Confidence 99998654 38999999875443211 11234579999988653 3467789999999999
Q ss_pred HHHH-hCCCCCChhh-------hhccCC----CCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 232 YELF-SGMRLSKTEE-------LRNTAS----IPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 232 yel~-tg~~p~~~~~-------l~~~~~----iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
||++ .|..|+.... ...... .+..+.+++.+||+.+|.+||++.+++++
T Consensus 212 ~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 212 LEICFDGEVPLKERTPSEKERFYEKKHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred HHHHhCCCCCccccChHHHHHHHHhccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 9995 6777764321 111112 23458889999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=246.06 Aligned_cols=238 Identities=15% Similarity=0.175 Sum_probs=168.4
Q ss_pred CCCCCC-CceEEEEeEECCCC--CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDG--SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g--~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~l 102 (778)
+||.|+ | +||+|....++ ..+++|.+..... ....+.+.+|+..++.++||||+++++.+... ..+
T Consensus 2 ~lg~G~~g--~v~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~--------~~~ 70 (268)
T cd05086 2 EIGNGWFG--KVLLSEIYTDTGVARVVVKELKANAS-SKEQNEFLQQGDPYRILQHPNILQCLGQCVEA--------IPY 70 (268)
T ss_pred cCCCCcCc--eEEEEEEEcCCCcceEEEEEecCCCC-hHHHHHHHHHHHHHhccCCcchhheEEEecCC--------Ccc
Confidence 578887 8 89999754333 3566777654322 23456788999999999999999999998763 378
Q ss_pred EEEecCC--cChHHHHHHhCcC-CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccccc
Q 004025 103 YIVTEPV--MPLSEKIKELGLE-GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (778)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~-~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~ 179 (778)
|+||||+ ++|.+++.+.... .......+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||++...
T Consensus 71 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~-~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~ 149 (268)
T cd05086 71 LLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHK-HNFLHSDLALRNCFLTSDLTVKVGDYGIGPSR 149 (268)
T ss_pred EEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH-CCeeccCCccceEEEcCCccEEeccccccccc
Confidence 9999999 5899998764321 122233456679999999999995 89999999999999999999999999987543
Q ss_pred CCCCCCCCCCccccccccCCCCCCccccccccc-cccCCCCCcchhHHHHHHHHHHHhC-CCCCChhh----hh----c-
Q 004025 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWT-AVRKSPPWSIDSWGLGCLIYELFSG-MRLSKTEE----LR----N- 248 (778)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~-~~~~~~~~~~DiwSLG~liyel~tg-~~p~~~~~----l~----~- 248 (778)
....... ......++..|+|||++..... .....++.++|+|||||++|||+++ ..|+.... +. .
T Consensus 150 ~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~ 225 (268)
T cd05086 150 YKEDYIE----TEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQ 225 (268)
T ss_pred Ccchhhh----cccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhc
Confidence 2211000 0111234458999999754211 1123456789999999999999974 55653211 10 0
Q ss_pred c---------CCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 249 T---------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 249 ~---------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. ..++..+.+++++|+ .+|.+||++.++++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~ 265 (268)
T cd05086 226 QVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRL 265 (268)
T ss_pred ccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHH
Confidence 0 123344667788888 679999999998753
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.2e-27 Score=244.87 Aligned_cols=213 Identities=15% Similarity=0.163 Sum_probs=166.6
Q ss_pred EEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEEEEecCC--cCh
Q 004025 35 SHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPV--MPL 112 (778)
Q Consensus 35 ~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~lyIVtE~v--~~L 112 (778)
+||.++++.+++.|++|.+.+.. ...+|...+....||||+++++.+... ..+|+||||+ ++|
T Consensus 8 ~v~~~~~~~~~~~~~~K~i~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~--------~~~~lv~e~~~~~~L 72 (237)
T cd05576 8 KVLLVMDTRTQQTFILKGLRKSS-------EYSRERLTIIPHCVPNMVCLHKYIVSE--------DSVFLVLQHAEGGKL 72 (237)
T ss_pred eEEEEEEccCCcEEEEEeecchh-------hhhhHHHHHHhcCCCceeehhhheecC--------CeEEEEEecCCCCCH
Confidence 89999999999999999997642 122344555666799999999999863 4899999999 579
Q ss_pred HHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccc
Q 004025 113 SEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQ 192 (778)
Q Consensus 113 ~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~ 192 (778)
.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|..+|+|||.+.......
T Consensus 73 ~~~l~~~~~---l~~~~~~~~~~ql~~~l~~lH~-~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~--------- 139 (237)
T cd05576 73 WSHISKFLN---IPEECVKRWAAEMVVALDALHR-EGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC--------- 139 (237)
T ss_pred HHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHEEEcCCCCEEEecccchhcccccc---------
Confidence 888876532 2344566779999999999995 899999999999999999999999999876654321
Q ss_pred cccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh--------ccCCCCcchHHHHHHHh
Q 004025 193 YAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------NTASIPKSLLPDYQRLL 264 (778)
Q Consensus 193 ~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~--------~~~~iP~~L~~~i~~lL 264 (778)
........|++||...+ ..++.++|+|||||++|||++|..++...... ....++..+.+++.+||
T Consensus 140 ~~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 213 (237)
T cd05576 140 DGEAVENMYCAPEVGGI------SEETEACDWWSLGAILFELLTGKTLVECHPSGINTHTTLNIPEWVSEEARSLLQQLL 213 (237)
T ss_pred ccCCcCccccCCcccCC------CCCCchhhHHHHHHHHHHHHHCcchhhcCchhcccccccCCcccCCHHHHHHHHHHc
Confidence 01122347999998765 34567899999999999999998765432110 11235566788999999
Q ss_pred ccCCCCCCCh-----HHHHhcc
Q 004025 265 SSMPSRRLNS-----SKLIENS 281 (778)
Q Consensus 265 ~~dP~~Rps~-----~~lL~~~ 281 (778)
+.||.+|+++ .++++|+
T Consensus 214 ~~dp~~R~~~~~~~~~~~~~h~ 235 (237)
T cd05576 214 QFNPTERLGAGVAGVEDIKSHP 235 (237)
T ss_pred cCCHHHhcCCCccchHHHHcCC
Confidence 9999999986 8999997
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-28 Score=283.02 Aligned_cols=245 Identities=16% Similarity=0.154 Sum_probs=200.1
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
+...+|+|.+.||.|. | .|+.++++.+++.||+|++++-..- ......++.|-.+|---..+-|+.++..|.++
T Consensus 72 l~~~DfeilKvIGrGaFG--EV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~-- 147 (1317)
T KOG0612|consen 72 LKAEDFEILKVIGRGAFG--EVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE-- 147 (1317)
T ss_pred CCHHhhHHHHHhcccccc--eeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc--
Confidence 4556899999999999 9 9999999999999999999862111 12344678888889888899999999999975
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
.++|+||||+ |+|-.++.+.. ...+.+.++++..|+-||.-||+ .|+|||||||+||+++..|++||+
T Consensus 148 ------~~LYlVMdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH~-mgyVHRDiKPDNvLld~~GHikLA 217 (1317)
T KOG0612|consen 148 ------RYLYLVMDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLHS-MGYVHRDIKPDNVLLDKSGHIKLA 217 (1317)
T ss_pred ------cceEEEEecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHh-ccceeccCCcceeEecccCcEeec
Confidence 4999999999 68999998876 23466778889999999999995 999999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhcc--
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT-- 249 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~~-- 249 (778)
|||-|-.+..++ .+.....++++.|.+||++...-. -+..|+..+|+||||++||||+.|..||..+.+..+
T Consensus 218 DFGsClkm~~dG-----~V~s~~aVGTPDYISPEvLqs~~~-~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~ 291 (1317)
T KOG0612|consen 218 DFGSCLKMDADG-----TVRSSVAVGTPDYISPEVLQSQGD-GKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYG 291 (1317)
T ss_pred cchhHHhcCCCC-----cEEeccccCCCCccCHHHHHhhcC-CccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHH
Confidence 999998887643 344445678889999999875321 135688899999999999999999999987655322
Q ss_pred --------CCCC------cchHHHHHHHhccCCCCCCC---hHHHHhcc
Q 004025 250 --------ASIP------KSLLPDYQRLLSSMPSRRLN---SSKLIENS 281 (778)
Q Consensus 250 --------~~iP------~~L~~~i~~lL~~dP~~Rps---~~~lL~~~ 281 (778)
..+| ....+++++++. +|..|+. +++|..||
T Consensus 292 KIm~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~Hp 339 (1317)
T KOG0612|consen 292 KIMNHKESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHP 339 (1317)
T ss_pred HHhchhhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCc
Confidence 2344 556777888765 5777887 99999998
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-27 Score=274.91 Aligned_cols=241 Identities=17% Similarity=0.234 Sum_probs=190.1
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECC-----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEe
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKD-----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~-----~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~ 90 (778)
+..+-.+.+++|+|. | +||+|..-. +...|+||.++... .......|++|+..|..|+|||||++++++..
T Consensus 484 ~r~~i~~~~eLGegaFG--kVf~a~~~~l~p~~~~~lVAVK~LKd~a-~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~ 560 (774)
T KOG1026|consen 484 PRSDIVFKEELGEGAFG--KVFLAEAYGLLPGQDEQLVAVKALKDKA-ENQARQDFRREAELLAELQHPNIVRLLGVCRE 560 (774)
T ss_pred chhheeehhhhcCchhh--hhhhhhccCCCCCccceehhHhhhcccc-cHHHHHHHHHHHHHHHhccCCCeEEEEEEEcc
Confidence 334566678899999 9 999998643 33679999997653 33456789999999999999999999999986
Q ss_pred cccccCCcccEEEEEecCC--cChHHHHHHhCcC------C-C----cchHHHHHHHHHHHHHHHHHHcCCCccccccCC
Q 004025 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLE------G-S----QRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCL 157 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~------~-~----~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp 157 (778)
. .-+|+|+||+ |+|.++|+..... + . .....+..+..||+.||.||-+ ..+|||||-.
T Consensus 561 ~--------~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~-~~FVHRDLAT 631 (774)
T KOG1026|consen 561 G--------DPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSS-HHFVHRDLAT 631 (774)
T ss_pred C--------CeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-Ccccccchhh
Confidence 3 4799999999 8999999875421 1 1 2233466779999999999996 8999999999
Q ss_pred CCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-
Q 004025 158 SSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS- 236 (778)
Q Consensus 158 ~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t- 236 (778)
.|++|.++..+||+|||+++.+-..+.... ......+.+|||||.+..+ .++.++||||+|++|||+|+
T Consensus 632 RNCLVge~l~VKIsDfGLsRdiYssDYYk~----~~~t~lPIRWMppEsIly~------kFTteSDVWs~GVvLWEIFsy 701 (774)
T KOG1026|consen 632 RNCLVGENLVVKISDFGLSRDIYSSDYYKV----RGNTLLPIRWMPPESILYG------KFTTESDVWSFGVVLWEIFSY 701 (774)
T ss_pred hhceeccceEEEecccccchhhhhhhhhcc----cCCceeeeecCCHHHhhcC------cccchhhhhhhhhhhhhhhcc
Confidence 999999999999999999998765321110 1123455699999999874 78899999999999999999
Q ss_pred CCCCCCh---hh----------hhccCCCCcchHHHHHHHhccCCCCCCChHHHHh
Q 004025 237 GMRLSKT---EE----------LRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 237 g~~p~~~---~~----------l~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
|..|+.. ++ +.....+|.++..++.+||+.+|++||++.++-.
T Consensus 702 G~QPy~glSn~EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~ 757 (774)
T KOG1026|consen 702 GKQPYYGLSNQEVIECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHS 757 (774)
T ss_pred ccCcccccchHHHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 4444321 11 1223578999999999999999999999998743
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3e-28 Score=263.07 Aligned_cols=236 Identities=21% Similarity=0.340 Sum_probs=186.1
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC------CCCeeeEeeeeEe
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR------HPNILAFLHSTEV 90 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr------HPnIlk~~d~~e~ 90 (778)
+.+|.+....|.|- + +|..|.+..-|..||||+|..+ +...+.-+.|+.+|++|. --++|+++..|..
T Consensus 431 D~RY~V~~~~GkGvFs--~Vvra~D~~r~~~vAiKIIRnN---E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~h 505 (752)
T KOG0670|consen 431 DSRYEVQGYTGKGVFS--TVVRARDQARGQEVAIKIIRNN---EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKH 505 (752)
T ss_pred cceeEEEeccccceee--eeeeccccCCCCeeEEEEeecc---hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhh
Confidence 34555555555554 4 8999999988999999999743 444556778999999996 2368899888876
Q ss_pred cccccCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC-CcE
Q 004025 91 ENIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT-LDW 168 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~-g~~ 168 (778)
.+++|+|+|.+ ..|.++|+..+..-......+..+.+|++-||..|.+ |+++|+||||+||+|+++ ..+
T Consensus 506 --------knHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~-c~vlHaDIKPDNiLVNE~k~iL 576 (752)
T KOG0670|consen 506 --------KNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKK-CGVLHADIKPDNILVNESKNIL 576 (752)
T ss_pred --------cceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHh-cCeeecccCccceEeccCccee
Confidence 45999999999 7999999998865444445577779999999999995 999999999999999965 458
Q ss_pred EEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh---
Q 004025 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE--- 245 (778)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~--- 245 (778)
||||||.+....... + ..+++..-|.|||++.| ..|.+.+|+||.||.|||||+|+.+|....
T Consensus 577 KLCDfGSA~~~~ene------i--tPYLVSRFYRaPEIiLG------~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~ 642 (752)
T KOG0670|consen 577 KLCDFGSASFASENE------I--TPYLVSRFYRAPEIILG------LPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQ 642 (752)
T ss_pred eeccCcccccccccc------c--cHHHHHHhccCcceeec------CcccCCccceeeceeeEEeeccceecCCCCcHH
Confidence 999999998876532 1 12366678999999998 578899999999999999999987763210
Q ss_pred -h---------------h-------------c---------------------------------cCCCCc-------ch
Q 004025 246 -L---------------R-------------N---------------------------------TASIPK-------SL 256 (778)
Q Consensus 246 -l---------------~-------------~---------------------------------~~~iP~-------~L 256 (778)
| + + ...+|. .|
T Consensus 643 MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~ 722 (752)
T KOG0670|consen 643 MLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQL 722 (752)
T ss_pred HHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHH
Confidence 0 0 0 011232 36
Q ss_pred HHHHHHHhccCCCCCCChHHHHhcc
Q 004025 257 LPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 257 ~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.+++.+||..||.+|.++.+.|.||
T Consensus 723 rdLLdkml~LdP~KRit~nqAL~Hp 747 (752)
T KOG0670|consen 723 RDLLDKMLILDPEKRITVNQALKHP 747 (752)
T ss_pred HHHHHHHhccChhhcCCHHHHhcCC
Confidence 6778899999999999999999998
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.7e-27 Score=258.79 Aligned_cols=232 Identities=16% Similarity=0.213 Sum_probs=185.1
Q ss_pred eccCCCCCC-CceEEEEeEECCC----CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 23 IGDPYPSAW-GSWSHFQGTSKDD----GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 23 i~~~lg~g~-g~w~Vy~g~~k~~----g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+++.||.|. | .||+|+...- .-.||||..+.....+ ..+.+..|.-+++.++||||+++++++++.
T Consensus 393 l~r~iG~GqFG--dVy~gvYt~~~kge~iaVAvKtCK~d~t~d-~tekflqEa~iMrnfdHphIikLIGv~~e~------ 463 (974)
T KOG4257|consen 393 LKRLIGEGQFG--DVYKGVYTDPEKGERIAVAVKTCKTDCTPD-DTEKFLQEASIMRNFDHPHIIKLIGVCVEQ------ 463 (974)
T ss_pred HHHhhcCCccc--ceeeeEecccccCcceeeeeehhccCCChh-hHHHHHHHHHHHHhCCCcchhheeeeeecc------
Confidence 345678888 8 8999987433 3469999987654443 377899999999999999999999999864
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
-++||||.+ |.|..||+..+..- .-..+..+++||+.||.|||+ .++|||||-..||+|.....+||+|||+
T Consensus 464 ---P~WivmEL~~~GELr~yLq~nk~sL--~l~tL~ly~~Qi~talaYLeS-krfVHRDIAaRNiLVsSp~CVKLaDFGL 537 (974)
T KOG4257|consen 464 ---PMWIVMELAPLGELREYLQQNKDSL--PLRTLTLYCYQICTALAYLES-KRFVHRDIAARNILVSSPQCVKLADFGL 537 (974)
T ss_pred ---ceeEEEecccchhHHHHHHhccccc--hHHHHHHHHHHHHHHHHHHHh-hchhhhhhhhhheeecCcceeeecccch
Confidence 699999999 78999999865322 233455669999999999997 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCh-----------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKT----------- 243 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~----------- 243 (778)
++.+.++.. +.......+..||+||.+.- ...+.++|+|.||+.|||++. |..||..
T Consensus 538 SR~~ed~~y-----YkaS~~kLPIKWmaPESINf------RrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iE 606 (974)
T KOG4257|consen 538 SRYLEDDAY-----YKASRGKLPIKWMAPESINF------RRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIE 606 (974)
T ss_pred hhhccccch-----hhccccccceeecCccccch------hcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEec
Confidence 999877421 11112223448999999876 467889999999999999987 6666642
Q ss_pred --hhhhccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 244 --EELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 244 --~~l~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
+.+....++|+.|..++.+||..+|.+||.+.++...
T Consensus 607 nGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~ 645 (974)
T KOG4257|consen 607 NGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAI 645 (974)
T ss_pred CCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHH
Confidence 1222336788899999999999999999999888654
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-28 Score=263.34 Aligned_cols=236 Identities=14% Similarity=0.164 Sum_probs=196.1
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
.+.++...+|.|+ | .|-.++.+.....+|+|++++....+ .+.+.+.+|-++|..++.|.|+++|.+|.++
T Consensus 420 ~dl~~iaTLGvGgFG--RVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~----- 492 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFG--RVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDS----- 492 (732)
T ss_pred hhhhhhhhcccCccc--eEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccc-----
Confidence 3566667788888 8 78777776666678999998764433 5677889999999999999999999999874
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
.++|+.||.| +.|...|+.++....... +.++.-+++|+.|||. .+||+|||||+|.+++.+|-+||.|||
T Consensus 493 ---kyvYmLmEaClGGElWTiLrdRg~Fdd~ta---rF~~acv~EAfeYLH~-k~iIYRDLKPENllLd~~Gy~KLVDFG 565 (732)
T KOG0614|consen 493 ---KYVYMLMEACLGGELWTILRDRGSFDDYTA---RFYVACVLEAFEYLHR-KGIIYRDLKPENLLLDNRGYLKLVDFG 565 (732)
T ss_pred ---hhhhhhHHhhcCchhhhhhhhcCCcccchh---hhhHHHHHHHHHHHHh-cCceeccCChhheeeccCCceEEeehh
Confidence 4999999999 579999998875544333 3348899999999995 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------ 248 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~------ 248 (778)
+++.+.... ....+++++.|.|||++.+ ++.+.++|.|+||++||||++|.+||...+...
T Consensus 566 FAKki~~g~-------KTwTFcGTpEYVAPEIILn------KGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~IL 632 (732)
T KOG0614|consen 566 FAKKIGSGR-------KTWTFCGTPEYVAPEIILN------KGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLIL 632 (732)
T ss_pred hHHHhccCC-------ceeeecCCcccccchhhhc------cCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHH
Confidence 999987632 3556788889999999987 578899999999999999999999997543221
Q ss_pred --------cCCCCcchHHHHHHHhccCCCCCCC-----hHHHHhcc
Q 004025 249 --------TASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENS 281 (778)
Q Consensus 249 --------~~~iP~~L~~~i~~lL~~dP~~Rps-----~~~lL~~~ 281 (778)
...|++...+++++|+..+|..|+. +.++-+|.
T Consensus 633 kGid~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~ 678 (732)
T KOG0614|consen 633 KGIDKIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHR 678 (732)
T ss_pred hhhhhhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhh
Confidence 1467788899999999999999986 57777776
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.7e-27 Score=257.40 Aligned_cols=234 Identities=20% Similarity=0.256 Sum_probs=173.1
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|.-...||.|+ | +||+|... +|..||||.+....... ...+.+|+.+|.+++|||+++++++|.+.+
T Consensus 76 ~Fs~~~~ig~Ggfg--~VYkG~l~-~~~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~------ 144 (361)
T KOG1187|consen 76 NFSESNLIGEGGFG--TVYKGVLS-DGTVVAVKRLSSNSGQG--EREFLNEVEILSRLRHPNLVKLLGYCLEGG------ 144 (361)
T ss_pred CCchhcceecCCCe--EEEEEEEC-CCCEEEEEEecCCCCcc--hhHHHHHHHHHhcCCCcCcccEEEEEecCC------
Confidence 444456788887 7 89999976 45999999887654331 334999999999999999999999998642
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCC--ccccccCCCCeEEcCCCcEEEEecc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCK--LVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~--ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
...+||+||+ ++|.++|...... ...-..-..++.++++||.|||+.+. |||||||++|||+++++..||+|||
T Consensus 145 -~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFG 222 (361)
T KOG1187|consen 145 -EHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFG 222 (361)
T ss_pred -ceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCcc
Confidence 1589999999 6899998775431 11111122348899999999998774 9999999999999999999999999
Q ss_pred cccccCC-CCCCCCCCcccccc-ccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh------h
Q 004025 175 VLSEFDG-NNEAANGPMLQYAW-LVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE------L 246 (778)
Q Consensus 175 la~~~~~-~~~~~~~~~~~~~~-~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~------l 246 (778)
++..... ... .... .++..|++||+...+ ..+.++|+||||+++.|+++|+.+.+... +
T Consensus 223 La~~~~~~~~~-------~~~~~~gt~gY~~PEy~~~g------~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l 289 (361)
T KOG1187|consen 223 LAKLGPEGDTS-------VSTTVMGTFGYLAPEYASTG------KLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSL 289 (361)
T ss_pred CcccCCccccc-------eeeecCCCCccCChhhhccC------CcCcccccccchHHHHHHHhCCcccCCCCCcccccH
Confidence 9965433 110 0001 345589999998763 56789999999999999999997654211 0
Q ss_pred -------------hcc-------CCCC--cc---hHHHHHHHhccCCCCCCChHHHHh
Q 004025 247 -------------RNT-------ASIP--KS---LLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 247 -------------~~~-------~~iP--~~---L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
..+ ...+ +. +..+-.+|++.+|..||+..++++
T Consensus 290 ~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 290 VEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred HHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence 000 1222 12 223346899999999999988754
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-27 Score=263.36 Aligned_cols=236 Identities=16% Similarity=0.233 Sum_probs=183.6
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCC---c-EEEEEEeCCC-CchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGS---P-VSIFSISGTN-AQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~---~-VaIK~~~~~~-~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
+-+++++||+|. | .||+|+.+..+. . ||||....+. ........+.+|.+++++|+||||++++++...+
T Consensus 158 ~v~l~kkLGeGaFG--eV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~-- 233 (474)
T KOG0194|consen 158 DIELGKKLGEGAFG--EVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLE-- 233 (474)
T ss_pred Cccccceeeccccc--EEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCC--
Confidence 444567899999 9 999999876533 3 8999988633 4456677899999999999999999999988764
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
.-+|||||+| |+|.++|+..+.. .......+++++.+.||.|||. .+++||||-..|++++.++.+||+
T Consensus 234 ------~Pl~ivmEl~~gGsL~~~L~k~~~~--v~~~ek~~~~~~AA~Gl~YLh~-k~~IHRDIAARNcL~~~~~~vKIS 304 (474)
T KOG0194|consen 234 ------EPLMLVMELCNGGSLDDYLKKNKKS--LPTLEKLRFCYDAARGLEYLHS-KNCIHRDIAARNCLYSKKGVVKIS 304 (474)
T ss_pred ------CccEEEEEecCCCcHHHHHHhCCCC--CCHHHHHHHHHHHHhHHHHHHH-CCCcchhHhHHHheecCCCeEEeC
Confidence 3699999999 6899999987631 1222344569999999999995 999999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhhc--
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELRN-- 248 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~~-- 248 (778)
|||+++.-... .+.....-.+.+|+|||.+..+ .++.++|+|||||++||+|+ |..|+.......
T Consensus 305 DFGLs~~~~~~------~~~~~~~klPirWLAPEtl~~~------~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~ 372 (474)
T KOG0194|consen 305 DFGLSRAGSQY------VMKKFLKKLPIRWLAPETLNTG------IFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVK 372 (474)
T ss_pred ccccccCCcce------eeccccccCcceecChhhhccC------ccccccchhheeeeEEeeeccCCCCCCCCCHHHHH
Confidence 99997654311 0001011345699999999874 67889999999999999999 566665332111
Q ss_pred ------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 249 ------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 249 ------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....|..+...+.+|+..+|..|+++.++.+.
T Consensus 373 ~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~ 416 (474)
T KOG0194|consen 373 AKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKK 416 (474)
T ss_pred HHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHH
Confidence 12345667788899999999999999887653
|
|
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.8e-28 Score=253.38 Aligned_cols=235 Identities=20% Similarity=0.237 Sum_probs=187.7
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC--CCC----eeeEeeeeE
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR--HPN----ILAFLHSTE 89 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr--HPn----Ilk~~d~~e 89 (778)
...+|+|.+.+|+|. | .|-++.++.++..||||++.. -+...+.++-|+++|.+|. -|+ ++.+.++|+
T Consensus 87 l~~Ry~i~~~lGeGtFG--kV~ec~D~~~~~~vAlKIik~---V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFd 161 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFG--KVVECWDRETKEHVALKIIKN---VDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFD 161 (415)
T ss_pred cccceehhhhhcCCccc--ceEEEeecCCCceehHHHHHH---HHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhh
Confidence 356899999999999 9 899999999999999999863 3456778899999999994 333 777778887
Q ss_pred ecccccCCcccEEEEEecCCc-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC----
Q 004025 90 VENIDATSTKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ---- 164 (778)
Q Consensus 90 ~e~~~g~~~~~~lyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~---- 164 (778)
-. .+++||+|.++ ++.++|++++...... ..|+.+.+||+++++||| +.+++|-||||+||++..
T Consensus 162 yr--------ghiCivfellG~S~~dFlk~N~y~~fpi-~~ir~m~~QL~~sv~fLh-~~kl~HTDLKPENILfvss~~~ 231 (415)
T KOG0671|consen 162 YR--------GHICIVFELLGLSTFDFLKENNYIPFPI-DHIRHMGYQLLESVAFLH-DLKLTHTDLKPENILFVSSEYF 231 (415)
T ss_pred cc--------CceEEEEeccChhHHHHhccCCccccch-HHHHHHHHHHHHHHHHHH-hcceeecCCChheEEEeccceE
Confidence 63 49999999998 7999999877655443 347788999999999999 599999999999998832
Q ss_pred ----------------CCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHH
Q 004025 165 ----------------TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLG 228 (778)
Q Consensus 165 ----------------~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG 228 (778)
+-.+||+|||-++..... ++.-+.+..|+|||++.+ -+.++.+|+||+|
T Consensus 232 ~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~---------hs~iVsTRHYRAPEViLg------LGwS~pCDvWSiG 296 (415)
T KOG0671|consen 232 KTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEH---------HSTIVSTRHYRAPEVILG------LGWSQPCDVWSIG 296 (415)
T ss_pred EEeccCCccceeccCCCcceEEEecCCcceeccC---------cceeeeccccCCchheec------cCcCCccCceeee
Confidence 235899999998876542 122234569999999998 4667899999999
Q ss_pred HHHHHHHhCCCCCChhh----hh--c--cCCC------------------------------------C-----------
Q 004025 229 CLIYELFSGMRLSKTEE----LR--N--TASI------------------------------------P----------- 253 (778)
Q Consensus 229 ~liyel~tg~~p~~~~~----l~--~--~~~i------------------------------------P----------- 253 (778)
|+|+|+++|..+|.+.+ +. + ++.+ |
T Consensus 297 CIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d 376 (415)
T KOG0671|consen 297 CILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDD 376 (415)
T ss_pred eEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCc
Confidence 99999999988875432 10 0 0001 1
Q ss_pred ---cchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 254 ---KSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 254 ---~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
..|.+++++||..||.+|+++.++|.|+
T Consensus 377 ~e~~~LfDLl~~mL~fDP~~RiTl~EAL~Hp 407 (415)
T KOG0671|consen 377 LEHVQLFDLLRRMLEFDPARRITLREALSHP 407 (415)
T ss_pred HHHhHHHHHHHHHHccCccccccHHHHhcCH
Confidence 1377889999999999999999999998
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-26 Score=275.51 Aligned_cols=145 Identities=14% Similarity=0.239 Sum_probs=123.9
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
.+|.+.++||.|. | +||.|.++.+++.|+||++..... .......+.+|+..++.++||||+++++++...
T Consensus 4 ~~y~i~~~LG~G~fg--~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~----- 76 (669)
T cd05610 4 EEFVIVKPISRGAFG--KVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSA----- 76 (669)
T ss_pred CCEEEEEEEecCCCe--EEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEEC-----
Confidence 4699999999998 8 999999999999999999976432 234456788999999999999999999998764
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
.++||||||+ ++|..++...+.. ....+..++.||+.||.|||. ++|+||||||+||||+.+|.+||+|||
T Consensus 77 ---~~~~lVmEy~~g~~L~~li~~~~~l---~~~~~~~i~~qil~aL~yLH~-~gIiHrDLKP~NILl~~~g~vkL~DFG 149 (669)
T cd05610 77 ---NNVYLVMEYLIGGDVKSLLHIYGYF---DEEMAVKYISEVALALDYLHR-HGIIHRDLKPDNMLISNEGHIKLTDFG 149 (669)
T ss_pred ---CEEEEEEeCCCCCCHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHh-CCEEeCCccHHHEEEcCCCCEEEEeCC
Confidence 4899999999 4799988765432 234456679999999999996 899999999999999999999999999
Q ss_pred ccc
Q 004025 175 VLS 177 (778)
Q Consensus 175 la~ 177 (778)
+++
T Consensus 150 ls~ 152 (669)
T cd05610 150 LSK 152 (669)
T ss_pred CCc
Confidence 875
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.5e-27 Score=264.83 Aligned_cols=208 Identities=17% Similarity=0.245 Sum_probs=165.6
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
...+...+.+|.|+ | .||+|+++.+|+.||||.+..... ....+...+|+++||+|+|||||+++++-++... +
T Consensus 12 ~y~W~~~e~LG~Ga~g--~V~rgrnketG~~vAvK~~~~~~~-~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~--~ 86 (732)
T KOG4250|consen 12 NYLWEMDERLGKGAFG--NVYRGRNKETGRLVAVKTFNKESS-LRPRERWCREIEILKKLNHPNIVKLFDIEETKFL--G 86 (732)
T ss_pred CcceeehhhhcCCccc--eeeeecccccccchhHHhhhhhcc-cchHHHHHHHHHHHHHcCchhhhhhcccCCcccc--C
Confidence 34567778999998 8 899999999999999999987432 2346678899999999999999999998776431 1
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEc--CCCc--EEE
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT--QTLD--WKL 170 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~--~~g~--~KL 170 (778)
.....-.+||||| ++|...|.+-.......+..+.-.+..|+.||+||| +++|+||||||.||++- ++|. .||
T Consensus 87 ~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~Lr-En~IvHRDlKP~NIvl~~Gedgq~IyKL 165 (732)
T KOG4250|consen 87 LVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLR-ENGIVHRDLKPGNIVLQIGEDGQSIYKL 165 (732)
T ss_pred cccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHH-HcCceeccCCCCcEEEeecCCCceEEee
Confidence 1123668999999 689999986443333344456666999999999999 59999999999999885 3343 899
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCCh
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT 243 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~ 243 (778)
+|||+++.+.++.. -....++..|.+||+.... ..++..+|.|||||++|++.+|..||..
T Consensus 166 tDfG~Arel~d~s~-------~~S~vGT~~YLhPel~E~q-----~~y~~tVDLWS~GvtlY~caTG~lPF~p 226 (732)
T KOG4250|consen 166 TDFGAARELDDNSL-------FTSLVGTEEYLHPELYERQ-----KKYTATVDLWSFGVTLYECATGELPFIP 226 (732)
T ss_pred ecccccccCCCCCe-------eeeecCchhhcChHHHhhc-----cCcCceeehhhhhhHHHHHhccCCCCCc
Confidence 99999999987531 1223556699999998742 5788899999999999999999988753
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=274.86 Aligned_cols=239 Identities=16% Similarity=0.198 Sum_probs=190.3
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCc-----EEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSP-----VSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~-----VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~ 92 (778)
..-++++.||.|. | .||.|....-... |+||.+.+. .+.+....+.+|..+|+.++|||||++++++.+.
T Consensus 692 ~~v~l~~~lG~G~FG--~VY~g~~~~~~~~~~~~~vaiK~l~~~-~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~- 767 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFG--EVYEGTYSDVPGSVSPIQVAVKSLKRL-SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDS- 767 (1025)
T ss_pred hheEeeeeecccccc--ceEEEEEecCCCCccceEEEEEecccc-CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCC-
Confidence 3456677899998 9 9999998755443 899988754 3445677899999999999999999999999873
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCC----CcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEG----SQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL 166 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~----~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g 166 (778)
...+|++||+ ++|..+|++..... .....-+..+..||++|++||++ .++|||||...|+++++..
T Consensus 768 -------~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~-~~fvHRDLAaRNCLL~~~r 839 (1025)
T KOG1095|consen 768 -------GPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES-KHFVHRDLAARNCLLDERR 839 (1025)
T ss_pred -------CCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh-CCCcCcchhhhheeecccC
Confidence 2689999999 68999999863211 11222355668999999999995 9999999999999999999
Q ss_pred cEEEEecccccccCCCCCCCCCCccccc--cccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCh
Q 004025 167 DWKLHAFDVLSEFDGNNEAANGPMLQYA--WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKT 243 (778)
Q Consensus 167 ~~KL~dFgla~~~~~~~~~~~~~~~~~~--~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~ 243 (778)
.+|++|||+++.+.... ++... ...+.+|||||.+.. ..++.++|+||||+||||+|+ |..||..
T Consensus 840 ~VKIaDFGlArDiy~~~------yyr~~~~a~lPvkWm~PEsl~d------~iFtskSDvWsFGVllWEifslG~~PY~~ 907 (1025)
T KOG1095|consen 840 VVKIADFGLARDIYDKD------YYRKHGEAMLPVKWMPPESLKD------GIFTSKSDVWSFGVLLWEIFSLGATPYPS 907 (1025)
T ss_pred cEEEcccchhHhhhhch------heeccCccccceecCCHHHHhh------cccccccchhhhHHHHHHHHhCCCCCCCC
Confidence 99999999999665432 22221 234459999999986 367889999999999999999 4566642
Q ss_pred h-------------hhhccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 244 E-------------ELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 244 ~-------------~l~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. .+.....+|..+.+++..||+.+|..||++..++++.
T Consensus 908 ~~n~~v~~~~~~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~ 958 (1025)
T KOG1095|consen 908 RSNFEVLLDVLEGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQD 958 (1025)
T ss_pred cchHHHHHHHHhCCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhh
Confidence 1 2334467899999999999999999999999998754
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=8e-27 Score=272.02 Aligned_cols=276 Identities=11% Similarity=0.111 Sum_probs=177.6
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCC----CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEec
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDD----GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~----g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e 91 (778)
...+|++.+.||.|+ | +||+|+++.+ +..|+||.+...... +...++ .++...+.++..++..+...
T Consensus 130 ~~~~y~l~~~LG~G~FG--~VYka~~~~~~~~~~~~vAvK~~~~~~~~----e~~~~e--~l~~~~~~~~~~~~~~~~~~ 201 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFG--VVYKASLVNKQSKKEGKYVLKKATEYGAV----EIWMNE--RVRRACPNSCADFVYGFLEP 201 (566)
T ss_pred ccCCeEEeEEEeeCCCe--EEEEEEEcCCccccCcEEEEEEecccchh----HHHHHH--HHHhhchhhHHHHHHhhhcc
Confidence 345799999999998 8 9999999988 999999997643221 111111 22333333444433332211
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcCC-----------------CcchHHHHHHHHHHHHHHHHHHcCCCccc
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEG-----------------SQRDEYYAWGLNQIAKAVSFLNNDCKLVH 152 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~-----------------~~~~~~i~~gl~QI~~aL~fLH~~~~ivH 152 (778)
.. ......+|||+||+ ++|.+++....... ......+..++.||+.||.|||+ .+|+|
T Consensus 202 ~~--~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~-~gIiH 278 (566)
T PLN03225 202 VS--SKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS-TGIVH 278 (566)
T ss_pred cc--cccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH-CCEEe
Confidence 10 00134799999999 46888887543110 01123356679999999999995 89999
Q ss_pred cccCCCCeEEcC-CCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccc----------------c
Q 004025 153 GNVCLSSVVVTQ-TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAV----------------R 215 (778)
Q Consensus 153 ~dLkp~NI~v~~-~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~----------------~ 215 (778)
|||||+||+++. ++.+||+|||++..+.... .+......+++.|+|||.+....... .
T Consensus 279 RDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~-----~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~ 353 (566)
T PLN03225 279 RDVKPQNIIFSEGSGSFKIIDLGAAADLRVGI-----NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQ 353 (566)
T ss_pred CcCCHHHEEEeCCCCcEEEEeCCCcccccccc-----ccCCcccccCCCccChHHhhccCCCCCCccccccccccchhcc
Confidence 999999999985 6899999999998664321 11122345567899999654221100 0
Q ss_pred CCCCCcchhHHHHHHHHHHHhCCCCCChhhh------hcc------------CCCC--------------cchHHHHHHH
Q 004025 216 KSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------RNT------------ASIP--------------KSLLPDYQRL 263 (778)
Q Consensus 216 ~~~~~~~DiwSLG~liyel~tg~~p~~~~~l------~~~------------~~iP--------------~~L~~~i~~l 263 (778)
..++.++|||||||++|||+++..+++.+.. ... ...+ ....+++++|
T Consensus 354 ~~~~~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~m 433 (566)
T PLN03225 354 LNLPDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSM 433 (566)
T ss_pred ccCCCCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHH
Confidence 1344567999999999999987654432210 000 0011 1123789999
Q ss_pred hccCCCCCCChHHHHhcccCCccccccccchhhhhhHHhhhcccCChhhHhHh
Q 004025 264 LSSMPSRRLNSSKLIENSVGDFWMTEYFQNKLVDTIHFMEILNLKDSVEKDTF 316 (778)
Q Consensus 264 L~~dP~~Rps~~~lL~~~~~~~w~~~ff~n~lv~~~~~Le~l~~k~~~EK~~F 316 (778)
|..||.+||++.++|+|+ ||++.....+..++.+......+..+.
T Consensus 434 L~~dP~kR~ta~e~L~Hp--------ff~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (566)
T PLN03225 434 MRFKGRQRISAKAALAHP--------YFDREGLLGLSVMQNLRLQLFRATQQD 478 (566)
T ss_pred ccCCcccCCCHHHHhCCc--------CcCCCCccccccccccccccchhhHHH
Confidence 999999999999999998 666544444444454444444443333
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-27 Score=244.17 Aligned_cols=241 Identities=20% Similarity=0.274 Sum_probs=190.6
Q ss_pred CCCceeccCCCCCCCceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 18 DLPYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..+|.-...++.|.. .|..+.+.-.+++|+||+......+....+.+.+|++.++.+.|+||++.+.+|.-.... .
T Consensus 16 ~~Ry~nL~p~~~g~~--~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l--~ 91 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ--IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTL--E 91 (369)
T ss_pred eeeeeeecccCCCCc--eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccH--H
Confidence 356777788888775 577788888899999999988766666778899999999999999999999998532110 0
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
.-..+|+|||++ .+|...+.-.. --+.++++++|++.|++|||+ .+|+||||||+||+|+.++.+|+.|||++
T Consensus 92 ~~~e~y~v~e~m~~nl~~vi~~el-----DH~tis~i~yq~~~~ik~lhs-~~IihRdLkPsnivv~~~~~lKi~dfg~a 165 (369)
T KOG0665|consen 92 EFQEVYLVMELMDANLCQVILMEL-----DHETISYILYQMLCGIKHLHS-AGIIHRDLKPSNIVVNSDCTLKILDFGLA 165 (369)
T ss_pred HHHhHHHHHHhhhhHHHHHHHHhc-----chHHHHHHHHHHHHHHHHHHh-cceeecccCcccceecchhheeeccchhh
Confidence 134789999999 67888776221 134477789999999999996 99999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-----------
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----------- 245 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----------- 245 (778)
+.-... +....+++...|.+||++.+ ..+...+||||+||++.||++|..+|.+..
T Consensus 166 r~e~~~-------~~mtpyVvtRyyrapevil~------~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~ 232 (369)
T KOG0665|consen 166 RTEDTD-------FMMTPYVVTRYYRAPEVILG------MGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQ 232 (369)
T ss_pred cccCcc-------cccCchhheeeccCchheec------cCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHH
Confidence 876542 23344567778999999988 458889999999999999999987764321
Q ss_pred -----------hhcc-----------------CCCCc---------------chHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 246 -----------LRNT-----------------ASIPK---------------SLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 246 -----------l~~~-----------------~~iP~---------------~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+..+ ..+|. .+++++.+||..||.+|.|++++|+||
T Consensus 233 lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HP 311 (369)
T KOG0665|consen 233 LGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHP 311 (369)
T ss_pred hcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCC
Confidence 0000 01222 246678999999999999999999999
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-27 Score=268.83 Aligned_cols=233 Identities=20% Similarity=0.311 Sum_probs=177.3
Q ss_pred eeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecccccCCcc
Q 004025 22 NIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATSTK 99 (778)
Q Consensus 22 ~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~g~~~~ 99 (778)
.-.+.+|.|. |. .||+|.. .|+.||||.+-. .....+.+||..|+.-+ |||||+|+..-.+ +
T Consensus 512 ~~~eilG~Gs~Gt-~Vf~G~y--e~R~VAVKrll~-----e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d--------~ 575 (903)
T KOG1027|consen 512 SPKEILGYGSNGT-VVFRGVY--EGREVAVKRLLE-----EFFDFAQREIQLLQESDEHPNVIRYYCSEQD--------R 575 (903)
T ss_pred ccHHHcccCCCCc-EEEEEee--CCceehHHHHhh-----HhHHHHHHHHHHHHhccCCCceEEEEeeccC--------C
Confidence 3345567777 54 7999998 589999998763 35668999999999985 9999999987544 4
Q ss_pred cEEEEEecCC-cChHHHHHHhCc-CCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC---C--CcEEEEe
Q 004025 100 ITIYIVTEPV-MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ---T--LDWKLHA 172 (778)
Q Consensus 100 ~~lyIVtE~v-~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~---~--g~~KL~d 172 (778)
..+||+.|.| .+|.++++.... ............+.|+++||++||+ ++||||||||+||+|+. + ...+|+|
T Consensus 576 qF~YIalELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHs-l~iVHRDLkPQNILI~~~~~~~~~ra~iSD 654 (903)
T KOG1027|consen 576 QFLYIALELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHS-LKIVHRDLKPQNILISVPSADGTLRAKISD 654 (903)
T ss_pred ceEEEEehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHh-cccccccCCCceEEEEccCCCcceeEEecc
Confidence 5999999999 589999987411 1111111123349999999999996 99999999999999985 3 4689999
Q ss_pred cccccccCCCCCCCCCCcc-ccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhC-CCCCChhhhhc--
Q 004025 173 FDVLSEFDGNNEAANGPML-QYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG-MRLSKTEELRN-- 248 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~-~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg-~~p~~~~~l~~-- 248 (778)
||+|..+..... .+. .....++..|+|||++... ....++|||||||++|++++| ..||...--++
T Consensus 655 fglsKkl~~~~s----S~~r~s~~sGt~GW~APE~L~~~------~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~N 724 (903)
T KOG1027|consen 655 FGLSKKLAGGKS----SFSRLSGGSGTSGWQAPEQLRED------RKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQAN 724 (903)
T ss_pred cccccccCCCcc----hhhcccCCCCcccccCHHHHhcc------ccCcccchhhcCceEEEEecCCccCCCchHHhhhh
Confidence 999999876432 121 2233445699999999874 445699999999999999997 57786543221
Q ss_pred ----------cCCCCc-chHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ----------TASIPK-SLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ----------~~~iP~-~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+...+. ...+++.+|++.+|..||++.++|.||
T Consensus 725 Il~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HP 768 (903)
T KOG1027|consen 725 ILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHP 768 (903)
T ss_pred hhcCccceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCC
Confidence 112221 457889999999999999999999999
|
|
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-27 Score=253.34 Aligned_cols=241 Identities=16% Similarity=0.223 Sum_probs=197.4
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
+....|..-+.+|.|+ | .||-++.+.+|+.+|+|.++++.... .-...+.||-.+|.++..|.||.+-..||+
T Consensus 182 vt~n~F~~~RvlGkGGFG--EV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeT--- 256 (591)
T KOG0986|consen 182 VTKNTFRVYRVLGKGGFG--EVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFET--- 256 (591)
T ss_pred ccccceeeeEEEeccccc--ceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecC---
Confidence 4455677778899998 8 99999999999999999999865443 335568899999999999999999999997
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
+..+++|+..+ ++|.-+|.+.+..+....+ ...+..+|+.||.+||+ .+||+|||||+||++++.|+++|+
T Consensus 257 -----kd~LClVLtlMNGGDLkfHiyn~g~~gF~e~r-a~FYAAEi~cGLehlH~-~~iVYRDLKPeNILLDd~GhvRIS 329 (591)
T KOG0986|consen 257 -----KDALCLVLTLMNGGDLKFHIYNHGNPGFDEQR-ARFYAAEIICGLEHLHR-RRIVYRDLKPENILLDDHGHVRIS 329 (591)
T ss_pred -----CCceEEEEEeecCCceeEEeeccCCCCCchHH-HHHHHHHHHhhHHHHHh-cceeeccCChhheeeccCCCeEee
Confidence 45899999999 6898888877654443333 45669999999999996 899999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh-------
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE------- 244 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~------- 244 (778)
|+|++..+.... ++ ...+++..|||||++.++ .|+.+.|+|||||+||||+.|+.||...
T Consensus 330 DLGLAvei~~g~-----~~--~~rvGT~GYMAPEvl~ne------~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~e 396 (591)
T KOG0986|consen 330 DLGLAVEIPEGK-----PI--RGRVGTVGYMAPEVLQNE------VYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKRE 396 (591)
T ss_pred ccceEEecCCCC-----cc--ccccCcccccCHHHHcCC------cccCCccHHHHHhHHHHHHcccCchhhhhhhhhHH
Confidence 999999987632 21 122566799999999884 5899999999999999999999998532
Q ss_pred hhhc---------cCCCCcchHHHHHHHhccCCCCCCCh-----HHHHhcc
Q 004025 245 ELRN---------TASIPKSLLPDYQRLLSSMPSRRLNS-----SKLIENS 281 (778)
Q Consensus 245 ~l~~---------~~~iP~~L~~~i~~lL~~dP~~Rps~-----~~lL~~~ 281 (778)
.+.. ..++++....+++.||..||.+|+.. +++.+||
T Consensus 397 Evdrr~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~Hp 447 (591)
T KOG0986|consen 397 EVDRRTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHP 447 (591)
T ss_pred HHHHHHhcchhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCc
Confidence 1111 14566677888899999999999864 6888887
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=7e-27 Score=260.62 Aligned_cols=228 Identities=19% Similarity=0.233 Sum_probs=180.6
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEeccccc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~g 95 (778)
-..|++...+|.|+ + .+..+.++.+++..++|++.+...+ ..+|+.++... .||||+++++.++.
T Consensus 321 ~~~y~~~~~~~~gs~s--~~~~~~~~~t~~~~~vkii~~~~~~------~~~e~~~~~~~~~h~niv~~~~v~~~----- 387 (612)
T KOG0603|consen 321 TESYEFREELGEGSFS--AVKYCESSPTDQEPAVKIISKRADD------NQDEIPISLLVRDHPNIVKSHDVYED----- 387 (612)
T ss_pred chhhccccccCCCCcc--ceeeeeccccccchhheeccccccc------cccccchhhhhcCCCcceeecceecC-----
Confidence 34699999999987 7 7899999999999999999976222 33556444444 69999999999987
Q ss_pred CCcccEEEEEecCC-c-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEE-cCCCcEEEEe
Q 004025 96 TSTKITIYIVTEPV-M-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV-TQTLDWKLHA 172 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v-~~~g~~KL~d 172 (778)
..++|+|||.+ + -|.+.+....... . ....++.||+.|+.|||. .++|||||||+||++ +..|.++|+|
T Consensus 388 ---~~~~~~v~e~l~g~ell~ri~~~~~~~---~-e~~~w~~~lv~Av~~LH~-~gvvhRDLkp~NIL~~~~~g~lrlty 459 (612)
T KOG0603|consen 388 ---GKEIYLVMELLDGGELLRRIRSKPEFC---S-EASQWAAELVSAVDYLHE-QGVVHRDLKPGNILLDGSAGHLRLTY 459 (612)
T ss_pred ---CceeeeeehhccccHHHHHHHhcchhH---H-HHHHHHHHHHHHHHHHHh-cCeeecCCChhheeecCCCCcEEEEE
Confidence 45999999999 3 3555554443222 1 233349999999999996 999999999999999 6999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh----hhhc
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----ELRN 248 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~----~l~~ 248 (778)
||+++..... .. .-..+..|.|||+... ..++.++|+||||+++|+|++|..||... ++..
T Consensus 460 FG~a~~~~~~---~~------tp~~t~~y~APEvl~~------~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~ 524 (612)
T KOG0603|consen 460 FGFWSELERS---CD------TPALTLQYVAPEVLAI------QEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHT 524 (612)
T ss_pred echhhhCchh---hc------ccchhhcccChhhhcc------CCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHH
Confidence 9999987653 00 1133458999999885 58999999999999999999999988542 2222
Q ss_pred c-------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 T-------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ~-------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ..++....++++.||+.+|.+|+++.++..|+
T Consensus 525 ~i~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~ 564 (612)
T KOG0603|consen 525 RIQMPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHP 564 (612)
T ss_pred hhcCCccccccCHHHHHHHHHhccCChhhCcChhhhccCc
Confidence 1 34667788999999999999999999999998
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.7e-26 Score=232.81 Aligned_cols=221 Identities=20% Similarity=0.323 Sum_probs=178.5
Q ss_pred EEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEEEEecCC--cCh
Q 004025 35 SHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPV--MPL 112 (778)
Q Consensus 35 ~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~lyIVtE~v--~~L 112 (778)
.||+|+.+.+|+.|++|++........ .+.+.+|++.++.++||||+++++.+... ...|+++|++ ++|
T Consensus 4 ~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~--------~~~~l~~e~~~~~~L 74 (244)
T smart00220 4 KVYLARDKKTGKLVAIKVIKKEKIKKK-RERILREISILKKLKHPNIVRLYDVFEDE--------DKLYLVMEYCDGGDL 74 (244)
T ss_pred EEEEEEECCCCcEEEEEEecccccccH-HHHHHHHHHHHHhCCCCcHHHHHhheeeC--------CEEEEEEeCCCCCCH
Confidence 899999999999999999986543322 56889999999999999999999999864 3899999999 379
Q ss_pred HHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccc
Q 004025 113 SEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQ 192 (778)
Q Consensus 113 ~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~ 192 (778)
..++..... .....+..++.|++.+|.|||+ .+++|+||+|.||+++.+|.++|+|||++........ .
T Consensus 75 ~~~~~~~~~---~~~~~~~~~~~~l~~~l~~lh~-~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~-------~ 143 (244)
T smart00220 75 FDLLKKRGR---LSEDEARFYARQILSALEYLHS-NGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGL-------L 143 (244)
T ss_pred HHHHHhccC---CCHHHHHHHHHHHHHHHHHHHH-cCeecCCcCHHHeEECCCCcEEEccccceeeeccccc-------c
Confidence 988876542 2334456669999999999995 8999999999999999999999999999887755311 1
Q ss_pred cccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCCh-hhhhc--------cC-------CCCcch
Q 004025 193 YAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT-EELRN--------TA-------SIPKSL 256 (778)
Q Consensus 193 ~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~-~~l~~--------~~-------~iP~~L 256 (778)
........|++||...+ ...+.++|+|+||+++|++++|..++.. ..... .. .+|..+
T Consensus 144 ~~~~~~~~~~~pE~~~~------~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (244)
T smart00220 144 TTFVGTPEYMAPEVLLG------KGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEA 217 (244)
T ss_pred ccccCCcCCCCHHHHcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHH
Confidence 11223447999999874 3456699999999999999999888754 21110 00 177888
Q ss_pred HHHHHHHhccCCCCCCChHHHHhcc
Q 004025 257 LPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 257 ~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.+++.+|+..+|..||++.++++++
T Consensus 218 ~~~i~~~l~~~p~~Rp~~~~~~~~~ 242 (244)
T smart00220 218 KDLIRKLLVKDPEKRLTAEEALQHP 242 (244)
T ss_pred HHHHHHHccCCchhccCHHHHhhCC
Confidence 9999999999999999999999987
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=229.21 Aligned_cols=232 Identities=17% Similarity=0.244 Sum_probs=182.4
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~ 94 (778)
.+.+|+|.+++|.|- + .||.|.+..+++.|.||+++. ...+.+++|+++|..|+ ||||++++|...+..
T Consensus 36 ~~ddYeivrk~GRGKYS--EVFeg~~~~~~eK~ViKiLKP-----VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~-- 106 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYS--EVFEGINITNNEKCVIKILKP-----VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPE-- 106 (338)
T ss_pred ccchHHHHHHHcCccHh--hHhcccccCCCceEEEeeech-----HHHHHHHHHHHHHHhccCCCCeeehhhhhcCcc--
Confidence 567899999999997 7 899999999999999999863 23567999999999999 999999999998755
Q ss_pred cCCcccEEEEEecCCc--ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEc-CCCcEEEE
Q 004025 95 ATSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT-QTLDWKLH 171 (778)
Q Consensus 95 g~~~~~~lyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~-~~g~~KL~ 171 (778)
.....+|+||+. +...+..... .--|.+.++|+++||.|||+ .||+|||+||.||+|+ +.-.++|+
T Consensus 107 ----SktpaLiFE~v~n~Dfk~ly~tl~------d~dIryY~~elLkALdyCHS-~GImHRDVKPhNvmIdh~~rkLrlI 175 (338)
T KOG0668|consen 107 ----SKTPSLIFEYVNNTDFKQLYPTLT------DYDIRYYIYELLKALDYCHS-MGIMHRDVKPHNVMIDHELRKLRLI 175 (338)
T ss_pred ----ccCchhHhhhhccccHHHHhhhhc------hhhHHHHHHHHHHHHhHHHh-cCcccccCCcceeeechhhceeeee
Confidence 346789999994 4444333321 12267779999999999996 9999999999999999 45679999
Q ss_pred ecccccccCCCCCCCCCCcccccccc-CCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCC-C----hhh
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLV-GAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLS-K----TEE 245 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~-~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~-~----~~~ 245 (778)
|+|++....... .|+-.+ ...|.-||++..- +.+.++.|+|||||++..|+..+.|| . .+|
T Consensus 176 DWGLAEFYHp~~--------eYnVRVASRyfKGPELLVdy-----~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQ 242 (338)
T KOG0668|consen 176 DWGLAEFYHPGK--------EYNVRVASRYFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 242 (338)
T ss_pred ecchHhhcCCCc--------eeeeeeehhhcCCchheeec-----hhccccHHHHHHHHHHHHHHhccCcccCCCCCHHH
Confidence 999998876532 222222 3356889998763 56889999999999999999887665 1 122
Q ss_pred hhcc---------------------------------------------CCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 246 LRNT---------------------------------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 246 l~~~---------------------------------------------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
+-.+ .-..++..+++.++|..|-..|+++.+.+.|
T Consensus 243 LVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 243 LVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred HHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 2110 0123456788999999999999999999999
Q ss_pred c
Q 004025 281 S 281 (778)
Q Consensus 281 ~ 281 (778)
+
T Consensus 323 p 323 (338)
T KOG0668|consen 323 P 323 (338)
T ss_pred c
Confidence 8
|
|
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-25 Score=256.56 Aligned_cols=250 Identities=18% Similarity=0.239 Sum_probs=200.4
Q ss_pred CCCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecc
Q 004025 15 GVKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVEN 92 (778)
Q Consensus 15 ~~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~ 92 (778)
+.+.--|+|.+.+|.|. | .||+++.+.+++.++||+.+..... -+.+.-|.++|+.+. |||+..++++|.-..
T Consensus 15 pdp~d~~ei~evig~Gtyg--kv~k~k~~~~~~~aa~kI~~~~~d~---deEiE~eynil~~~~~hpnv~~fyg~~~k~~ 89 (953)
T KOG0587|consen 15 PDPADIFEIIEVIGNGTYG--KVYKGRHVKTGQLAAIKIMDPTEDE---EEEIELEYNMLKKYSHHPNVATFYGAFIKKD 89 (953)
T ss_pred CCCCCccEEEEEEeeccce--eEEEEeeeecCceeeeEeecCCccc---cHHHHHHHHHHHhccCCCCcceEEEEEEEec
Confidence 34566799999999998 7 8999999999999999998864433 345667888898885 999999999987543
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEE
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
..+ +..+++||||| |+..++++... .....+++|+++++.++.||.+||+ ..++|||||-.||+++.+|.+||
T Consensus 90 ~~~---~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~-nkviHRDikG~NiLLT~e~~VKL 164 (953)
T KOG0587|consen 90 PGN---GDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHN-NKVIHRDIKGQNVLLTENAEVKL 164 (953)
T ss_pred CCC---CCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhh-cceeeecccCceEEEeccCcEEE
Confidence 222 56999999999 57888888765 4556677899999999999999996 89999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCC-hhhhhcc
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSK-TEELRNT 249 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~-~~~l~~~ 249 (778)
+|||++..++..- -.+..+++++.|||||++... ......++..+|+||||++-.||--|.+|+. ....+-+
T Consensus 165 vDFGvSaQldsT~------grRnT~iGtP~WMAPEViac~-e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraL 237 (953)
T KOG0587|consen 165 VDFGVSAQLDSTV------GRRNTFIGTPYWMAPEVIACD-ESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRAL 237 (953)
T ss_pred eeeeeeeeeeccc------ccccCcCCCcccccceeeecc-cCCCCCcccccchhhccceeehhcCCCCCccCcchhhhh
Confidence 9999988876521 123344666789999998753 2223467789999999999999999988754 3334434
Q ss_pred CCCC--------------cchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 250 ASIP--------------KSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 250 ~~iP--------------~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
..|| +.+.+.+..||.+|-.+||+..++++|+
T Consensus 238 F~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hp 283 (953)
T KOG0587|consen 238 FLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHP 283 (953)
T ss_pred ccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCC
Confidence 3333 2355678899999999999999999998
|
|
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-27 Score=239.87 Aligned_cols=235 Identities=18% Similarity=0.198 Sum_probs=178.2
Q ss_pred cCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHH-HhcCCCCCeeeEeeeeEecccccCCcccEE
Q 004025 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKR-LRTVRHPNILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~-Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~l 102 (778)
..||.|. | +|++..+|.+|+..|||.+...+... ...+++.|+.. ++.-+.|||++|++.+..|. ..
T Consensus 70 g~iG~G~fG--~V~KM~hk~sg~~mAVKrIr~~n~~k-eq~rll~e~d~~mks~~cp~IVkfyGa~F~EG--------dc 138 (361)
T KOG1006|consen 70 GEIGNGAFG--TVNKMLHKPSGKLMAVKRIRSNNIEK-EQKRLLMEHDTVMKSSNCPNIVKFYGALFSEG--------DC 138 (361)
T ss_pred HHhcCCcch--hhhhhhcCccCcEEEEEEeeeccchH-HHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCC--------ce
Confidence 4577777 8 99999999999999999998765533 33455666654 55557999999999998753 68
Q ss_pred EEEecCC-cChHHHHHHh-CcCCC-cchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccccc
Q 004025 103 YIVTEPV-MPLSEKIKEL-GLEGS-QRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (778)
Q Consensus 103 yIVtE~v-~~L~~~L~~~-~~~~~-~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~ 179 (778)
+|.||.+ .+|..+.+.- ..... ..+.++..+.--.+.||.||....+|+||||||+||+++..|.+||||||++..+
T Consensus 139 WiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqL 218 (361)
T KOG1006|consen 139 WICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQL 218 (361)
T ss_pred eeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhH
Confidence 9999999 5655444321 11111 2233444456677899999998889999999999999999999999999999887
Q ss_pred CCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCCh-----hhhhcc-----
Q 004025 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT-----EELRNT----- 249 (778)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~-----~~l~~~----- 249 (778)
.+. +....-.+-..|||||.+...- .+|...+|+||||+.|||+.+|..|+.. +++.++
T Consensus 219 v~S-------iAkT~daGCrpYmAPERi~p~~----~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdp 287 (361)
T KOG1006|consen 219 VDS-------IAKTVDAGCRPYMAPERIDPSD----KGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDP 287 (361)
T ss_pred HHH-------HHhhhccCCccccChhccCCcc----CCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCC
Confidence 652 2122223334899999987641 3688899999999999999999988753 233221
Q ss_pred ---------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 250 ---------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 250 ---------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
......+...+.-||.+|-..||...++++++
T Consensus 288 p~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~ 328 (361)
T KOG1006|consen 288 PILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFP 328 (361)
T ss_pred CeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcCc
Confidence 12445677888999999999999999999987
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-26 Score=244.06 Aligned_cols=250 Identities=19% Similarity=0.235 Sum_probs=194.7
Q ss_pred CCCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEec
Q 004025 15 GVKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVE 91 (778)
Q Consensus 15 ~~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e 91 (778)
-+..-+|.+...||.|+ | +|-.|-+|.+.+.+|||++.+... .+...+--..|-++|... +-|.+++++.+|.+-
T Consensus 345 ~i~~tDFnFl~VlGKGSFG--KVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTm 422 (683)
T KOG0696|consen 345 RIKATDFNFLMVLGKGSFG--KVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTM 422 (683)
T ss_pred ceeecccceEEEeccCccc--eeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhh
Confidence 45556788999999999 9 999999999999999999987532 122344556676777665 577888888888873
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEE
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~K 169 (778)
..+|+||||| ++|--+|++.+...... ...+...|+-||-|||+ .+|++||||.+||+++.+|.+|
T Consensus 423 --------DRLyFVMEyvnGGDLMyhiQQ~GkFKEp~---AvFYAaEiaigLFFLh~-kgIiYRDLKLDNvmLd~eGHiK 490 (683)
T KOG0696|consen 423 --------DRLYFVMEYVNGGDLMYHIQQVGKFKEPV---AVFYAAEIAIGLFFLHS-KGIIYRDLKLDNVMLDSEGHIK 490 (683)
T ss_pred --------hheeeEEEEecCchhhhHHHHhcccCCch---hhhhhHHHHHHhhhhhc-CCeeeeeccccceEeccCCceE
Confidence 4899999999 68998998876533222 22348899999999996 8999999999999999999999
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc-
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN- 248 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~- 248 (778)
|.|||++..---. ......+++++.|+|||++.. +.|..++|+|++|+|+|||+.|++||+.++-..
T Consensus 491 i~DFGmcKEni~~------~~TTkTFCGTPdYiAPEIi~Y------qPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~el 558 (683)
T KOG0696|consen 491 IADFGMCKENIFD------GVTTKTFCGTPDYIAPEIIAY------QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDEL 558 (683)
T ss_pred eeecccccccccC------CcceeeecCCCcccccceEEe------cccccchhHHHHHHHHHHHHcCCCCCCCCCHHHH
Confidence 9999999754321 223445678889999999986 578899999999999999999999998754322
Q ss_pred -------cCCCCcch----HHHHHHHhccCCCCCCCh-----HHHHhcccCCccccccccchhhhh
Q 004025 249 -------TASIPKSL----LPDYQRLLSSMPSRRLNS-----SKLIENSVGDFWMTEYFQNKLVDT 298 (778)
Q Consensus 249 -------~~~iP~~L----~~~i~~lL~~dP~~Rps~-----~~lL~~~~~~~w~~~ff~n~lv~~ 298 (778)
....|++| ...++.+|...|.+|+.. .++-.|+ ||++.-.+.
T Consensus 559 F~aI~ehnvsyPKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~--------FFR~iDWek 616 (683)
T KOG0696|consen 559 FQAIMEHNVSYPKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHP--------FFRRIDWEK 616 (683)
T ss_pred HHHHHHccCcCcccccHHHHHHHHHHhhcCCccccCCCCccccchhhCc--------chhhccHHH
Confidence 23455554 566788999999999875 3566665 777654433
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.1e-26 Score=249.93 Aligned_cols=234 Identities=16% Similarity=0.250 Sum_probs=188.9
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~ 99 (778)
.+...++|.|. | .||.|.+|.-.-.|+||.++. +...++.+..|..+||.|+|||+++++++|..+-
T Consensus 269 ItMkhKLGGGQYG--eVYeGvWKkyslTvAVKtLKE---DtMeveEFLkEAAvMKeikHpNLVqLLGVCT~Ep------- 336 (1157)
T KOG4278|consen 269 ITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEP------- 336 (1157)
T ss_pred eeeeeccCCCccc--ceeeeeeeccceeeehhhhhh---cchhHHHHHHHHHHHHhhcCccHHHHhhhhccCC-------
Confidence 34456788887 8 999999999999999999863 2345778899999999999999999999998753
Q ss_pred cEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 100 ~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
-+||||||+ +.|.+||++.+..... ...+.++..||..|+.||. ..++|||||-..|.+|.++..+|++|||+++
T Consensus 337 -PFYIiTEfM~yGNLLdYLRecnr~ev~-avvLlyMAtQIsSaMeYLE-kknFIHRDLAARNCLVgEnhiVKvADFGLsR 413 (1157)
T KOG4278|consen 337 -PFYIITEFMCYGNLLDYLRECNRSEVP-AVVLLYMATQISSAMEYLE-KKNFIHRDLAARNCLVGENHIVKVADFGLSR 413 (1157)
T ss_pred -CeEEEEecccCccHHHHHHHhchhhcc-hhHHHHHHHHHHHHHHHHH-HhhhhhhhhhhhhccccccceEEeeccchhh
Confidence 699999998 7899999998754432 3346677899999999999 4899999999999999999999999999999
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhhc--------
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELRN-------- 248 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~~-------- 248 (778)
.+..+.... +-....+..|.+||-+... ..+.++|+|+||+|+||+.+ |..|+..-++.+
T Consensus 414 lMtgDTYTA-----HAGAKFPIKWTAPEsLAyN------tFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkg 482 (1157)
T KOG4278|consen 414 LMTGDTYTA-----HAGAKFPIKWTAPESLAYN------TFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKG 482 (1157)
T ss_pred hhcCCceec-----ccCccCcccccCccccccc------ccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhcc
Confidence 987742110 1112234489999987652 56679999999999999988 445664433322
Q ss_pred -----cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 249 -----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 249 -----~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
...+|+.+.++++.||+.+|..||++.++-+.
T Consensus 483 yRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqa 519 (1157)
T KOG4278|consen 483 YRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQA 519 (1157)
T ss_pred ccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHH
Confidence 24689999999999999999999999987553
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-27 Score=240.30 Aligned_cols=244 Identities=18% Similarity=0.261 Sum_probs=183.8
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+-+-.+.||.|. | .||..++..+|+.|++|++..-..+-...+.+-+|++.|...+|.|++..+|.+...+.+.
T Consensus 53 ~Di~PDRPIGYGAFG--VVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~df-- 128 (449)
T KOG0664|consen 53 QDIQPDRPIGYGAFG--VVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSF-- 128 (449)
T ss_pred ccCCCCCccccccee--EEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchH--
Confidence 3445567899998 8 8999999999999999998743333234566778999999999999999999887543221
Q ss_pred cccEEEEEecCCc-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
-..+|++||.+. +|...|-.-.. ...+-++-.+|||++||+|||+ ++|.||||||.|.+|+.+..+||||||++
T Consensus 129 -FqEiYV~TELmQSDLHKIIVSPQ~---Ls~DHvKVFlYQILRGLKYLHs-A~ILHRDIKPGNLLVNSNCvLKICDFGLA 203 (449)
T KOG0664|consen 129 -FQELYVLTELMQSDLHKIIVSPQA---LTPDHVKVFVYQILRGLKYLHT-ANILHRDIKPGNLLVNSNCILKICDFGLA 203 (449)
T ss_pred -HHHHHHHHHHHHhhhhheeccCCC---CCcchhhhhHHHHHhhhHHHhh-cchhhccCCCccEEeccCceEEecccccc
Confidence 236899999984 68776654322 2233466669999999999996 99999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh----hhh-----
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----ELR----- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~----~l~----- 247 (778)
+..+.+.. .....-+++..|++||++.+. ..|+.++|+||.||++.|++..+.+|... ++.
T Consensus 204 Rvee~d~~-----~hMTqEVVTQYYRAPEiLMGa-----RhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdL 273 (449)
T KOG0664|consen 204 RTWDQRDR-----LNMTHEVVTQYYRAPELLMGA-----RRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDL 273 (449)
T ss_pred cccchhhh-----hhhHHHHHHHHhccHHHhhcc-----hhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHH
Confidence 87655321 111222455589999999986 68899999999999999999988777431 110
Q ss_pred ----------------------c---------cCCCCc------chHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ----------------------N---------TASIPK------SLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ----------------------~---------~~~iP~------~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ++.+.. ....++..++..+|..|.+.++.+.|.
T Consensus 274 LGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 274 LGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred hCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 0 011111 123456788999999999999998886
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-25 Score=246.40 Aligned_cols=236 Identities=14% Similarity=0.178 Sum_probs=185.9
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
....|+++||+|. | .|+.|.-- .+..||||++...... .....+.+|+++|.+|+||||+.+++++..++
T Consensus 538 s~L~~~ekiGeGqFG--EVhLCeve-g~lkVAVK~Lr~~a~~-~~r~~F~kEIkiLsqLkhPNIveLvGVC~~De----- 608 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFG--EVHLCEVE-GPLKVAVKILRPDATK-NARNDFLKEIKILSRLKHPNIVELLGVCVQDD----- 608 (807)
T ss_pred hheehhhhhcCcccc--eeEEEEec-CceEEEEeecCcccch-hHHHHHHHHHHHHhccCCCCeeEEEeeeecCC-----
Confidence 3477889999999 8 89998854 3689999999754333 33567899999999999999999999998754
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
-+++||||+ ++|.+++........... ....++.||+.||+||.+ +++|||||.+.|++|+.++.+||+|||+
T Consensus 609 ---PicmI~EYmEnGDLnqFl~aheapt~~t~-~~vsi~tqiasgmaYLes-~nfVHrd~a~rNcLv~~e~~iKiadfgm 683 (807)
T KOG1094|consen 609 ---PLCMITEYMENGDLNQFLSAHELPTAETA-PGVSICTQIASGMAYLES-LNFVHRDLATRNCLVDGEFTIKIADFGM 683 (807)
T ss_pred ---chHHHHHHHhcCcHHHHHHhccCcccccc-hhHHHHHHHHHHHHHHHh-hchhhccccccceeecCcccEEecCccc
Confidence 799999999 789999988744331222 223469999999999996 9999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCcccc--ccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh--CCCCCCh---hhh-h
Q 004025 176 LSEFDGNNEAANGPMLQY--AWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS--GMRLSKT---EEL-R 247 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~--~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t--g~~p~~~---~~l-~ 247 (778)
++.+-.. ++++. ..+.+.+|||+|.+.-+ ..+.++|+|+||+.+||+|+ ...||.. ++. .
T Consensus 684 sR~lysg------~yy~vqgr~vlpiRwmawEsillg------kFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vve 751 (807)
T KOG1094|consen 684 SRNLYSG------DYYRVQGRAVLPIRWMAWESILLG------KFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVE 751 (807)
T ss_pred ccccccC------CceeeecceeeeeeehhHHHHHhc------cccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHH
Confidence 9977542 22222 23445699999998763 67889999999999999886 3445431 111 1
Q ss_pred ----------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 ----------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 ----------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
...-+|..+.+++-+|++.+-++||+++++..+
T Consensus 752 n~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~ 800 (807)
T KOG1094|consen 752 NAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLF 800 (807)
T ss_pred hhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHH
Confidence 113467889999999999999999999987543
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-25 Score=253.40 Aligned_cols=237 Identities=16% Similarity=0.212 Sum_probs=189.7
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCC---CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDG---SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g---~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
-.|.+.||.|. | .||+|+.|..| ..||||.++.. ..+.....+..|..+|-+..||||+++.++....
T Consensus 631 i~Ie~VIGaGEFG--EVc~GrLk~pgkre~~VAIKTLK~G-ytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks----- 702 (996)
T KOG0196|consen 631 VKIEKVIGAGEFG--EVCSGRLKLPGKREITVAIKTLKAG-YTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKS----- 702 (996)
T ss_pred eEEEEEEeccccc--ceecccccCCCCcceeEEEeeeccC-ccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecC-----
Confidence 45677889888 9 99999999777 47999999754 3445667789999999999999999999998753
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
+-+.|||||+ ++|..+|+.+.- ......+.-+++.|+.|++||- +.++|||||-..||+||.+-..|+.|||
T Consensus 703 ---~PvMIiTEyMENGsLDsFLR~~DG--qftviQLVgMLrGIAsGMkYLs-dm~YVHRDLAARNILVNsnLvCKVsDFG 776 (996)
T KOG0196|consen 703 ---KPVMIITEYMENGSLDSFLRQNDG--QFTVIQLVGMLRGIASGMKYLS-DMNYVHRDLAARNILVNSNLVCKVSDFG 776 (996)
T ss_pred ---ceeEEEhhhhhCCcHHHHHhhcCC--ceEeehHHHHHHHHHHHhHHHh-hcCchhhhhhhhheeeccceEEEecccc
Confidence 4799999999 689999998762 2233345566999999999999 5999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCC-Ch---hhhhc-
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLS-KT---EELRN- 248 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~-~~---~~l~~- 248 (778)
+++.+.++.+ ..+.......+.+|.|||.+.. ...+.++|+||+|++|||+++ |..|+ +- +-++.
T Consensus 777 LSRvledd~~---~~ytt~GGKIPiRWTAPEAIa~------RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaI 847 (996)
T KOG0196|consen 777 LSRVLEDDPE---AAYTTLGGKIPIRWTAPEAIAY------RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 847 (996)
T ss_pred ceeecccCCC---ccccccCCccceeecChhHhhh------cccCchhhccccceEEEEecccCCCcccccchHHHHHHH
Confidence 9998876531 1222223344459999999876 467889999999999999987 55454 32 11211
Q ss_pred --------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 249 --------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 249 --------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
...+|..|.+++..|++++-..||.+.+++..
T Consensus 848 e~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~ 887 (996)
T KOG0196|consen 848 EQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVST 887 (996)
T ss_pred HhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHH
Confidence 23567789999999999999999999998765
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.7e-24 Score=232.00 Aligned_cols=136 Identities=15% Similarity=0.199 Sum_probs=116.6
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-----CC---CeeeEeeee
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-----HP---NILAFLHST 88 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-----HP---nIlk~~d~~ 88 (778)
..+|.+.++||-|- + |||.+.+..+.+.||+|+.... +.+.+.+..||++|++++ |+ +||+++|.|
T Consensus 77 ~gRY~v~rKLGWGHFS--TVWLawDtq~~r~VAlKVvKSA---qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~F 151 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFS--TVWLAWDTQNKRYVALKVVKSA---QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHF 151 (590)
T ss_pred CceEEEEEeccccccc--eeEEEeeccCCeEEEEEEEehh---hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccc
Confidence 37899999999998 7 9999999999999999998742 356778999999999996 33 599999999
Q ss_pred EecccccCCcccEEEEEecCCc-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEc
Q 004025 89 EVENIDATSTKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT 163 (778)
Q Consensus 89 e~e~~~g~~~~~~lyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~ 163 (778)
.....+ +.++|+|+|+.+ .|..+|+.....+.. ...++.+++||+.||.|||.+|+|||-||||+||++.
T Consensus 152 khsGpN----G~HVCMVfEvLGdnLLklI~~s~YrGlp-l~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 152 KHSGPN----GQHVCMVFEVLGDNLLKLIKYSNYRGLP-LSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred eecCCC----CcEEEEEehhhhhHHHHHHHHhCCCCCc-HHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence 987766 479999999997 588888887665543 3457888999999999999999999999999999984
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.7e-25 Score=242.56 Aligned_cols=241 Identities=12% Similarity=0.197 Sum_probs=185.1
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
=|...+.||.|. | .|..+++.++...||+|.+.++.- ...+....+.|-.+|..-..+-||++|..|.+.
T Consensus 630 mFvkik~iGvGAFG--eV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDk------ 701 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFG--EVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDK------ 701 (1034)
T ss_pred ceEEEeeecccccc--eeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccC------
Confidence 377788899999 9 999999999999999999987532 224566788899999999999999999999874
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+|+||||+ +++-.+|-+.+..+ ++.-.++|..+..|+.+.| +.|+|||||||+||+|+.+|.+||.|||+
T Consensus 702 --dnLYFVMdYIPGGDmMSLLIrmgIFe---E~LARFYIAEltcAiesVH-kmGFIHRDiKPDNILIDrdGHIKLTDFGL 775 (1034)
T KOG0608|consen 702 --DNLYFVMDYIPGGDMMSLLIRMGIFE---EDLARFYIAELTCAIESVH-KMGFIHRDIKPDNILIDRDGHIKLTDFGL 775 (1034)
T ss_pred --CceEEEEeccCCccHHHHHHHhccCH---HHHHHHHHHHHHHHHHHHH-hccceecccCccceEEccCCceeeeeccc
Confidence 4899999999 67887777766532 3344556999999999999 49999999999999999999999999999
Q ss_pred ccccCC--------CCCCCC-C---------------------------CccccccccCCCCCCccccccccccccCCCC
Q 004025 176 LSEFDG--------NNEAAN-G---------------------------PMLQYAWLVGAQYKPVELAKSDWTAVRKSPP 219 (778)
Q Consensus 176 a~~~~~--------~~~~~~-~---------------------------~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~ 219 (778)
|+-+.- .++... . .+.....+++..|++||++.. .+++
T Consensus 776 CTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r------~g~~ 849 (1034)
T KOG0608|consen 776 CTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLAR------TGYT 849 (1034)
T ss_pred cccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcc------cCcc
Confidence 975521 110000 0 011122345569999999876 5788
Q ss_pred CcchhHHHHHHHHHHHhCCCCCChhhh-----h-----c------cCCCCcchHHHHHHHhccCCCCCCC---hHHHHhc
Q 004025 220 WSIDSWGLGCLIYELFSGMRLSKTEEL-----R-----N------TASIPKSLLPDYQRLLSSMPSRRLN---SSKLIEN 280 (778)
Q Consensus 220 ~~~DiwSLG~liyel~tg~~p~~~~~l-----~-----~------~~~iP~~L~~~i~~lL~~dP~~Rps---~~~lL~~ 280 (778)
..+|+||.|++||||+.|++||-.+.. + + ..++.++...++.+|+. .+..|+. .+++..|
T Consensus 850 q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~-sad~RLGkng~d~vKaH 928 (1034)
T KOG0608|consen 850 QLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCC-SADSRLGKNGADQVKAH 928 (1034)
T ss_pred ccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhc-ChhhhhcccchhhhhcC
Confidence 999999999999999999999854321 1 1 14566777888877664 3555653 4567788
Q ss_pred c
Q 004025 281 S 281 (778)
Q Consensus 281 ~ 281 (778)
+
T Consensus 929 p 929 (1034)
T KOG0608|consen 929 P 929 (1034)
T ss_pred c
Confidence 7
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-25 Score=237.70 Aligned_cols=250 Identities=14% Similarity=0.128 Sum_probs=194.8
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-----hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEec
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-----DGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-----~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e 91 (778)
..+|-+...+|.|+ + .||++.+...++.||||+-..+... +...+.+.+|.++.|.|.||.|+++||+|.-+
T Consensus 462 n~RYLlLhLLGrGGFS--EVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslD 539 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFS--EVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLD 539 (775)
T ss_pred HHHHHHHHHhccccHH--HHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeec
Confidence 34688888999997 6 8999999989999999998754332 24567889999999999999999999999876
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCC-CccccccCCCCeEEc---CC
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDC-KLVHGNVCLSSVVVT---QT 165 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~-~ivH~dLkp~NI~v~---~~ 165 (778)
+ ..+|-|.||| .+|.-||+......... ...++.||+.||.||+... .|||-||||.||++- ..
T Consensus 540 t-------dsFCTVLEYceGNDLDFYLKQhklmSEKE---ARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~Gtac 609 (775)
T KOG1151|consen 540 T-------DSFCTVLEYCEGNDLDFYLKQHKLMSEKE---ARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTAC 609 (775)
T ss_pred c-------ccceeeeeecCCCchhHHHHhhhhhhHHH---HHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCccc
Confidence 4 4799999999 36999999876543322 3445999999999999622 699999999999984 56
Q ss_pred CcEEEEecccccccCCCCCCCCCCc-cccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh
Q 004025 166 LDWKLHAFDVLSEFDGNNEAANGPM-LQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE 244 (778)
Q Consensus 166 g~~KL~dFgla~~~~~~~~~~~~~~-~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~ 244 (778)
|++||.|||++..++++.......+ +...+.++-+|.|||.+.-+.. +...+.++|+||+|+++|.++.|+.||..+
T Consensus 610 GeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgke--PPKIsnKVDVWSvGVIFyQClYGrKPFGhn 687 (775)
T KOG1151|consen 610 GEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKE--PPKISNKVDVWSVGVIFYQCLYGRKPFGHN 687 (775)
T ss_pred ceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCC--CCccccceeeEeeehhhhhhhccCCCCCCc
Confidence 8999999999999987665433222 2333445558999998764321 134567999999999999999999999754
Q ss_pred hhhc-------c-----CCC------CcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 245 ELRN-------T-----ASI------PKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 245 ~l~~-------~-----~~i------P~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+-.+ + ..+ ......++++||..--..|..+.++-.++
T Consensus 688 qsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dp 742 (775)
T KOG1151|consen 688 QSQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDP 742 (775)
T ss_pred hhHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCc
Confidence 3211 0 123 34567889999999999999999988876
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-24 Score=232.10 Aligned_cols=240 Identities=15% Similarity=0.191 Sum_probs=173.1
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHH--hcCCCCCeeeEeeeeEecccccC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRL--RTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~L--k~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
.-.+.+.||.|. | .||+|+++ |+.||||+|.... .+...+|.++. ..|||+||+.|+..=..++
T Consensus 212 qI~L~e~IGkGRyG--EVwrG~wr--Ge~VAVKiF~srd-----E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~---- 278 (513)
T KOG2052|consen 212 QIVLQEIIGKGRFG--EVWRGRWR--GEDVAVKIFSSRD-----ERSWFRETEIYQTVMLRHENILGFIAADNKDN---- 278 (513)
T ss_pred eeEEEEEecCcccc--ceeecccc--CCceEEEEecccc-----hhhhhhHHHHHHHHHhccchhhhhhhccccCC----
Confidence 456677889998 9 99999997 9999999998532 12344444444 4579999999998766544
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCC-------CccccccCCCCeEEcCCCc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDC-------KLVHGNVCLSSVVVTQTLD 167 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~-------~ivH~dLkp~NI~v~~~g~ 167 (778)
++-..+++||+|- |+|++||.+.... .+...+.++.++.||.|||.+- .|.|||||..||+|..+|.
T Consensus 279 gs~TQLwLvTdYHe~GSL~DyL~r~tv~----~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~ 354 (513)
T KOG2052|consen 279 GSWTQLWLVTDYHEHGSLYDYLNRNTVT----TEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT 354 (513)
T ss_pred CceEEEEEeeecccCCcHHHHHhhccCC----HHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCc
Confidence 2357899999998 7999999986542 3334566999999999999532 4999999999999999999
Q ss_pred EEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhC----------
Q 004025 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG---------- 237 (778)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg---------- 237 (778)
.-|+|+|++-......... .+.....+++.+|||||++....+.---..-..+||||||.++||+.-.
T Consensus 355 C~IADLGLAv~h~~~t~~i--di~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey 432 (513)
T KOG2052|consen 355 CCIADLGLAVRHDSDTDTI--DIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEY 432 (513)
T ss_pred EEEeeceeeEEecccCCcc--cCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhh
Confidence 9999999998776643221 2223334667799999998753221000111368999999999999763
Q ss_pred CCCCC--------hhhhhc-------cCCCCc---------chHHHHHHHhccCCCCCCChHHHH
Q 004025 238 MRLSK--------TEELRN-------TASIPK---------SLLPDYQRLLSSMPSRRLNSSKLI 278 (778)
Q Consensus 238 ~~p~~--------~~~l~~-------~~~iP~---------~L~~~i~~lL~~dP~~Rps~~~lL 278 (778)
++||. .++.+. ...||. .+..+++.|+..||..|.++-.+-
T Consensus 433 ~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriK 497 (513)
T KOG2052|consen 433 QLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIK 497 (513)
T ss_pred cCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHH
Confidence 13331 122222 234553 255678899999999999886553
|
|
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.5e-25 Score=245.33 Aligned_cols=238 Identities=15% Similarity=0.178 Sum_probs=186.1
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCC---CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDG---SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g---~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+.++||.|. | .|++|.++..+ -.||||++....... ....+.+|+..|.+|+|||+|++|+++-+
T Consensus 111 ~i~l~e~LG~GsFg--vV~rg~Wt~psgk~V~VAVKclr~d~l~~-~mddflrEas~M~~L~H~hliRLyGvVl~----- 182 (1039)
T KOG0199|consen 111 QIKLYELLGEGSFG--VVKRGTWTQPSGKHVNVAVKCLRDDSLNA-IMDDFLREASHMLKLQHPHLIRLYGVVLD----- 182 (1039)
T ss_pred HHHHHHHhcCccee--eEeeccccCCCCcEEeEEEEeccCCccch-hHHHHHHHHHHHHhccCcceeEEeeeecc-----
Confidence 455677889998 8 89999987544 369999987543332 56789999999999999999999999975
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
.-+.+|||.+ ++|.+.|.. ..........+..++.||+.||.||.. .++|||||-..||++-....+|||||
T Consensus 183 ----qp~mMV~ELaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLes-krlvHRDLAARNlllasprtVKI~DF 256 (1039)
T KOG0199|consen 183 ----QPAMMVFELAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLES-KRLVHRDLAARNLLLASPRTVKICDF 256 (1039)
T ss_pred ----chhhHHhhhcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhh-hhhhhhhhhhhhheecccceeeeecc
Confidence 2689999998 789998887 223333344466679999999999996 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCC-CCCCh----hhhhc
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM-RLSKT----EELRN 248 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~-~p~~~----~~l~~ 248 (778)
|+++.+....+.. ...-...++..|.|||.++. ..++.++|+|++|+.|||||+++ .|+.. ..+++
T Consensus 257 GLmRaLg~ned~Y---vm~p~rkvPfAWCaPEsLrh------~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~ 327 (1039)
T KOG0199|consen 257 GLMRALGENEDMY---VMAPQRKVPFAWCAPESLRH------RKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKN 327 (1039)
T ss_pred cceeccCCCCcce---EecCCCcCcccccCHhHhcc------ccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHh
Confidence 9999997743211 01111233447899999987 46788999999999999999964 45421 12222
Q ss_pred ---------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 249 ---------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 249 ---------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
...+|+.+.+++++||..+|..||++..+.+.
T Consensus 328 iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 328 IDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred ccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence 24577889999999999999999999887543
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.6e-25 Score=213.97 Aligned_cols=204 Identities=14% Similarity=0.109 Sum_probs=157.5
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhc-CCCCCeeeEeeeeEecccccC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRT-VRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~-LrHPnIlk~~d~~e~e~~~g~ 96 (778)
....-++++|.|+ | .|-+-++..+|...|+|.+.....+. ....+.+|+.+..+ ..+|.++.|++.+..+.
T Consensus 46 d~L~~i~elGrGayG--~vekmrh~~sg~imAvKri~~tvn~q-~q~r~L~dldi~~r~~~CPf~V~FyGa~~reg---- 118 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYG--VVEKMRHIQSGTIMAVKRIRATVNSQ-EQKRLLMDLDIIMRTVDCPFTVHFYGALFREG---- 118 (282)
T ss_pred hhhhhhhhhcCCccc--hhhheeeccCCeEEEEeeehhhcChH-HHHHHHHhhhhhccCCCCCeEEEeehhhhccc----
Confidence 3445567789987 8 67777888899999999998765443 34556778876554 56999999999987653
Q ss_pred CcccEEEEEecCC-cChHHHHHHhCcC-CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV-MPLSEKIKELGLE-GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v-~~L~~~L~~~~~~-~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
.++|.||.+ .+|..+.++--.. ....+..+-.+...|++||.|||++.+++|||+||+||+||..|.+|+||||
T Consensus 119 ----dvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFG 194 (282)
T KOG0984|consen 119 ----DVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFG 194 (282)
T ss_pred ----cEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccc
Confidence 799999999 6777665543222 2233444566688999999999998899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSK 242 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~ 242 (778)
++..+.+. +...-..+-..|||||.+..+... ..|+-++|+||||+.|.||..++.|++
T Consensus 195 IsG~L~dS-------iAkt~daGCkpYmaPEri~~e~n~--~gY~vksDvWSLGItmiElA~lr~PY~ 253 (282)
T KOG0984|consen 195 ISGYLVDS-------IAKTMDAGCKPYMAPERINPELNQ--KGYSVKSDVWSLGITMIEMAILRFPYE 253 (282)
T ss_pred cceeehhh-------hHHHHhcCCCccCChhhcCcccCc--ccceeehhhhhhhhhhhhhhhcccccc
Confidence 99887653 111111233489999999865332 478899999999999999999998765
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.9e-24 Score=242.84 Aligned_cols=258 Identities=13% Similarity=0.095 Sum_probs=172.9
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEEC----------------CCCCcEEEEEEeCCCCch--h----------HHHHH
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSK----------------DDGSPVSIFSISGTNAQD--G----------HLAAA 66 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k----------------~~g~~VaIK~~~~~~~~~--~----------~~~~~ 66 (778)
....+|++.++||+|+ | +||+|... ..++.|+||.+....... . ..+..
T Consensus 142 ~~~d~F~i~~~LG~GgFG--~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~ 219 (507)
T PLN03224 142 WSSDDFQLRDKLGGGNFG--ITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETG 219 (507)
T ss_pred ccccCceEeeEeecCCCe--EEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchh
Confidence 4556899999999999 9 89999752 345689999987532111 0 11223
Q ss_pred HHHHHHHhcCCCCCe-----eeEeeeeEecccccCCcccEEEEEecCC--cChHHHHHHhCcC-----------------
Q 004025 67 RNGVKRLRTVRHPNI-----LAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLE----------------- 122 (778)
Q Consensus 67 ~~ev~~Lk~LrHPnI-----lk~~d~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~----------------- 122 (778)
..|+..+.+++|.++ +++++++.....++...+...|+|+||+ ++|.++|......
T Consensus 220 ~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~ 299 (507)
T PLN03224 220 MVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPD 299 (507)
T ss_pred HHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhh
Confidence 346677777776554 6677776543322222245789999999 4688888642110
Q ss_pred ----CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccC
Q 004025 123 ----GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVG 198 (778)
Q Consensus 123 ----~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~ 198 (778)
.......+..++.||+.+|.|||+ .+++||||||+||+++.++.+||+|||++..+.... .........+
T Consensus 300 ~~~~~~~~~~~~~~i~~ql~~aL~~lH~-~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~-----~~~~~~g~~t 373 (507)
T PLN03224 300 NMPQDKRDINVIKGVMRQVLTGLRKLHR-IGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGI-----NFNPLYGMLD 373 (507)
T ss_pred hcccccCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCchHhEEECCCCcEEEEeCcCccccccCC-----ccCccccCCC
Confidence 001123355668999999999995 899999999999999999999999999987654321 1111112234
Q ss_pred CCCCCcccccccccccc----------------CCCCCcchhHHHHHHHHHHHhCCC-CCCh------h------hhh--
Q 004025 199 AQYKPVELAKSDWTAVR----------------KSPPWSIDSWGLGCLIYELFSGMR-LSKT------E------ELR-- 247 (778)
Q Consensus 199 ~~Y~aPE~~~~~~~~~~----------------~~~~~~~DiwSLG~liyel~tg~~-p~~~------~------~l~-- 247 (778)
+.|++||.+........ .......|+||+||++|+|++|.. ++.. + .+.
T Consensus 374 p~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~ 453 (507)
T PLN03224 374 PRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRW 453 (507)
T ss_pred cceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHH
Confidence 68999998754211000 112235799999999999999863 3321 0 000
Q ss_pred -----------ccCCCCcchHHHHHHHhccCC---CCCCChHHHHhcc
Q 004025 248 -----------NTASIPKSLLPDYQRLLSSMP---SRRLNSSKLIENS 281 (778)
Q Consensus 248 -----------~~~~iP~~L~~~i~~lL~~dP---~~Rps~~~lL~~~ 281 (778)
....++....+++.+||..+| .+|+|+.++|+|+
T Consensus 454 r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp 501 (507)
T PLN03224 454 RMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHR 501 (507)
T ss_pred HhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCC
Confidence 012345667889999999765 6899999999998
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.2e-25 Score=227.02 Aligned_cols=250 Identities=17% Similarity=0.245 Sum_probs=192.9
Q ss_pred CCCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcC-CCCCeeeEeeeeEec
Q 004025 15 GVKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTV-RHPNILAFLHSTEVE 91 (778)
Q Consensus 15 ~~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e 91 (778)
++.-.+|.+...||.|+ . +|..++.+++.+.+|+|++++.-.++ ......+.|-.+..+- +||.++-++.+|.++
T Consensus 246 ~l~l~df~ll~vigrgsya--kvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqte 323 (593)
T KOG0695|consen 246 GLGLQDFDLLRVIGRGSYA--KVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTE 323 (593)
T ss_pred ccccccceeeeeecCcchh--hhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhccc
Confidence 34456799999999986 5 89999999999999999998764332 4455666676666665 699999999999987
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEE
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~K 169 (778)
+ .+++|.||| ++|--++++..... ++....+-..|+.||.|||+ .+|++||||.+||+++..|.+|
T Consensus 324 s--------rlffvieyv~ggdlmfhmqrqrklp---eeharfys~ei~lal~flh~-rgiiyrdlkldnvlldaeghik 391 (593)
T KOG0695|consen 324 S--------RLFFVIEYVNGGDLMFHMQRQRKLP---EEHARFYSAEICLALNFLHE-RGIIYRDLKLDNVLLDAEGHIK 391 (593)
T ss_pred c--------eEEEEEEEecCcceeeehhhhhcCc---HHHhhhhhHHHHHHHHHHhh-cCeeeeeccccceEEccCCcee
Confidence 5 899999999 57776666654332 23334447899999999995 9999999999999999999999
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCCh------
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT------ 243 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~------ 243 (778)
|.|+|+|+.--..++ ....+++++.|.|||++++ ..|..++|+|+||+||+||+.|+.||+-
T Consensus 392 ltdygmcke~l~~gd------~tstfcgtpnyiapeilrg------eeygfsvdwwalgvlmfemmagrspfdivgm~n~ 459 (593)
T KOG0695|consen 392 LTDYGMCKEGLGPGD------TTSTFCGTPNYIAPEILRG------EEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNP 459 (593)
T ss_pred ecccchhhcCCCCCc------ccccccCCCcccchhhhcc------cccCceehHHHHHHHHHHHHcCCCCcceecCCCc
Confidence 999999986544322 2344677889999999998 4789999999999999999999999851
Q ss_pred ----hh------hhccCCCCcch----HHHHHHHhccCCCCCCCh------HHHHhcccCCccccccccchhhhh
Q 004025 244 ----EE------LRNTASIPKSL----LPDYQRLLSSMPSRRLNS------SKLIENSVGDFWMTEYFQNKLVDT 298 (778)
Q Consensus 244 ----~~------l~~~~~iP~~L----~~~i~~lL~~dP~~Rps~------~~lL~~~~~~~w~~~ff~n~lv~~ 298 (778)
++ +.....||.++ ...++..|++||+.|+.. .++..|+ ||++.-.+.
T Consensus 460 d~ntedylfqvilekqiriprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~--------ffr~idwd~ 526 (593)
T KOG0695|consen 460 DMNTEDYLFQVILEKQIRIPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHA--------FFRSIDWDL 526 (593)
T ss_pred ccchhHHHHHHHhhhcccccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcch--------hhhhCCHHH
Confidence 10 12224677765 456889999999999864 4555554 666544433
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.3e-24 Score=268.25 Aligned_cols=222 Identities=19% Similarity=0.269 Sum_probs=166.3
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~ 99 (778)
|...+.+|.|+ | .||+|+.+.++..|+||.+...... ...|++.+++++||||+++++++..+
T Consensus 692 ~~~~~~ig~G~~g--~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~l~~l~HpnIv~~~~~~~~~-------- 755 (968)
T PLN00113 692 LKEENVISRGKKG--ASYKGKSIKNGMQFVVKEINDVNSI------PSSEIADMGKLQHPNIVKLIGLCRSE-------- 755 (968)
T ss_pred CCcccEEccCCCe--eEEEEEECCCCcEEEEEEccCCccc------cHHHHHHHhhCCCCCcceEEEEEEcC--------
Confidence 44556788888 8 9999999999999999998643221 23468899999999999999999864
Q ss_pred cEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcC--CCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNND--CKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 100 ~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~--~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
...|+||||+ ++|.++++... ......++.||+.||.|||.. .+++||||||+||+++.++..++. |+.
T Consensus 756 ~~~~lv~Ey~~~g~L~~~l~~l~------~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~ 828 (968)
T PLN00113 756 KGAYLIHEYIEGKNLSEVLRNLS------WERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSL 828 (968)
T ss_pred CCCEEEEeCCCCCcHHHHHhcCC------HHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecc
Confidence 3789999999 57999986421 223445599999999999943 489999999999999999888875 554
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-----h----
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-----L---- 246 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-----l---- 246 (778)
....... ....++..|+|||++.+ ..++.++|||||||++|||++|+.|++... +
T Consensus 829 ~~~~~~~----------~~~~~t~~y~aPE~~~~------~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~ 892 (968)
T PLN00113 829 PGLLCTD----------TKCFISSAYVAPETRET------KDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWA 892 (968)
T ss_pred ccccccC----------CCccccccccCcccccC------CCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHH
Confidence 4332211 01134458999999876 357789999999999999999998874211 0
Q ss_pred ---------hc-c-CCC----C------cchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 ---------RN-T-ASI----P------KSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ---------~~-~-~~i----P------~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. . ..+ + ..+.+++.+|++.+|.+||++.++++.-
T Consensus 893 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L 948 (968)
T PLN00113 893 RYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTL 948 (968)
T ss_pred HHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHH
Confidence 00 0 001 1 1244567799999999999999998753
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.6e-23 Score=205.91 Aligned_cols=210 Identities=21% Similarity=0.319 Sum_probs=169.9
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEEEE
Q 004025 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIV 105 (778)
Q Consensus 27 lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~lyIV 105 (778)
|+.|. | .||+++...+|+.++||++....... ..+.+.+|++.++.++|++|+++++.+... ...|++
T Consensus 1 l~~g~~~--~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~--------~~~~~~ 69 (215)
T cd00180 1 LGEGGFG--TVYLARDKKTGKKVAIKIIKKEDSSS-LLEELLREIEILKKLNHPNIVKLYGVFEDE--------NHLYLV 69 (215)
T ss_pred CCcCCce--EEEEEEecCCCcEEEEEEeccccchh-HHHHHHHHHHHHHhcCCCCeeeEeeeeecC--------CeEEEE
Confidence 35555 5 89999998889999999998654321 346789999999999999999999999864 389999
Q ss_pred ecCCc--ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC-CCcEEEEecccccccCCC
Q 004025 106 TEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ-TLDWKLHAFDVLSEFDGN 182 (778)
Q Consensus 106 tE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~-~g~~KL~dFgla~~~~~~ 182 (778)
+|++. +|..++.... .......+..++.+++.+|.+||+ .+++|+||+|.||+++. ++.++|+|||.+......
T Consensus 70 ~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~-~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~ 146 (215)
T cd00180 70 MEYCEGGSLKDLLKENE--GKLSEDEILRILLQILEGLEYLHS-NGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSD 146 (215)
T ss_pred EecCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCC
Confidence 99995 7999887652 112344456669999999999995 89999999999999999 899999999999877543
Q ss_pred CCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhccCCCCcchHHHHHH
Q 004025 183 NEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASIPKSLLPDYQR 262 (778)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~~~~iP~~L~~~i~~ 262 (778)
.. ..........|++||..... ..++.+.|+|+||+++|++ ..+.+++.+
T Consensus 147 ~~------~~~~~~~~~~~~~pe~~~~~-----~~~~~~~D~~~lg~~~~~l-------------------~~~~~~l~~ 196 (215)
T cd00180 147 KS------LLKTIVGTPAYMAPEVLLGK-----GYYSEKSDIWSLGVILYEL-------------------PELKDLIRK 196 (215)
T ss_pred cc------hhhcccCCCCccChhHhccc-----CCCCchhhhHHHHHHHHHH-------------------HHHHHHHHH
Confidence 21 01112234589999998763 2567789999999999999 467889999
Q ss_pred HhccCCCCCCChHHHHhc
Q 004025 263 LLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 263 lL~~dP~~Rps~~~lL~~ 280 (778)
|+..+|..||++.+++++
T Consensus 197 ~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 197 MLQKDPEKRPSAKEILEH 214 (215)
T ss_pred HhhCCcccCcCHHHHhhC
Confidence 999999999999999875
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.7e-24 Score=236.89 Aligned_cols=195 Identities=22% Similarity=0.227 Sum_probs=161.5
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC------chhHHHHHHHHHHHHhcCC---CCCeeeEeeeeE
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA------QDGHLAAARNGVKRLRTVR---HPNILAFLHSTE 89 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~------~~~~~~~~~~ev~~Lk~Lr---HPnIlk~~d~~e 89 (778)
.|+..+++|.|. | .|+.|++|+.+..|.||.+.++.. ++..+-.+-.|+.+|.+|+ |+||+|++++||
T Consensus 562 ~yttlq~lG~GAyG--kV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 562 DYTTLQPLGEGAYG--KVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cceeeeeccccccc--eEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 699999999999 9 999999999999999999987532 1122334567999999998 999999999999
Q ss_pred ecccccCCcccEEEEEecCCc---ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC
Q 004025 90 VENIDATSTKITIYIVTEPVM---PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL 166 (778)
Q Consensus 90 ~e~~~g~~~~~~lyIVtE~v~---~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g 166 (778)
++. ++||+||.-+ +|.++|..+....... -+.+++||+-|+++|| +.+|||||||=+||.|+.+|
T Consensus 640 ddd--------~yyl~te~hg~gIDLFd~IE~kp~m~E~e---Ak~IFkQV~agi~hlh-~~~ivhrdikdenvivd~~g 707 (772)
T KOG1152|consen 640 DDD--------YYYLETEVHGEGIDLFDFIEFKPRMDEPE---AKLIFKQVVAGIKHLH-DQGIVHRDIKDENVIVDSNG 707 (772)
T ss_pred cCC--------eeEEEecCCCCCcchhhhhhccCccchHH---HHHHHHHHHhcccccc-ccCceecccccccEEEecCC
Confidence 853 9999999985 5999998776433322 3555999999999999 59999999999999999999
Q ss_pred cEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCC
Q 004025 167 DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLS 241 (778)
Q Consensus 167 ~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~ 241 (778)
-+||+|||.+...... |+- .+.++..|.|||++.+. ......-|||+||+|+|.+.....||
T Consensus 708 ~~klidfgsaa~~ksg------pfd--~f~gtv~~aapevl~g~-----~y~gk~qdiwalgillytivykenpy 769 (772)
T KOG1152|consen 708 FVKLIDFGSAAYTKSG------PFD--VFVGTVDYAAPEVLGGE-----KYLGKPQDIWALGILLYTIVYKENPY 769 (772)
T ss_pred eEEEeeccchhhhcCC------Ccc--eeeeeccccchhhhCCC-----ccCCCcchhhhhhheeeEEEeccCCC
Confidence 9999999998776642 221 23566699999999885 45667889999999999998877665
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.7e-23 Score=223.99 Aligned_cols=238 Identities=15% Similarity=0.218 Sum_probs=173.8
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHh--cCCCCCeeeEeeeeEeccccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLR--TVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk--~LrHPnIlk~~d~~e~e~~~g 95 (778)
.|-++.+.+++|. | .||+|... ++.||||+|.. ...+.+.+|-.+.+ .++|+||++|+..-+....+
T Consensus 210 ~pl~l~eli~~Grfg--~V~KaqL~--~~~VAVKifp~-----~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~- 279 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFG--CVWKAQLD--NRLVAVKIFPE-----QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTAD- 279 (534)
T ss_pred CchhhHHHhhcCccc--eeehhhcc--CceeEEEecCH-----HHHHHHHhHHHHHhccCccchhHHHhhchhccCCcc-
Confidence 4677888899998 8 99999984 79999999974 23455666666555 56799999999876543222
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCC--------CccccccCCCCeEEcCC
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDC--------KLVHGNVCLSSVVVTQT 165 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~--------~ivH~dLkp~NI~v~~~ 165 (778)
...++|||||. ++|.+||+.+-..- .....++..+++||+|||++. .|+|||||..||+|.++
T Consensus 280 ---~~eywLVt~fh~kGsL~dyL~~ntisw----~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~D 352 (534)
T KOG3653|consen 280 ---RMEYWLVTEFHPKGSLCDYLKANTISW----NSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKND 352 (534)
T ss_pred ---ccceeEEeeeccCCcHHHHHHhccccH----HHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccC
Confidence 45789999999 79999999875432 224455899999999999754 49999999999999999
Q ss_pred CcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCC------
Q 004025 166 LDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMR------ 239 (778)
Q Consensus 166 g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~------ 239 (778)
+...|+|||++..+....... . ....+++.+|||||++.+..+......-..+||||+|.++|||++.-.
T Consensus 353 lTccIaDFGLAl~~~p~~~~~--d--~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~ 428 (534)
T KOG3653|consen 353 LTCCIADFGLALRLEPGKPQG--D--THGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGP 428 (534)
T ss_pred CcEEeeccceeEEecCCCCCc--c--hhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCC
Confidence 999999999998886432211 1 223466779999999988533221222247899999999999998532
Q ss_pred ------CCCh--------hhh-------hccCCCCc---------chHHHHHHHhccCCCCCCChHHH
Q 004025 240 ------LSKT--------EEL-------RNTASIPK---------SLLPDYQRLLSSMPSRRLNSSKL 277 (778)
Q Consensus 240 ------p~~~--------~~l-------~~~~~iP~---------~L~~~i~~lL~~dP~~Rps~~~l 277 (778)
||.. +++ +....||. .+.+.+..|+..|+..|+|+.-+
T Consensus 429 vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv 496 (534)
T KOG3653|consen 429 VPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCV 496 (534)
T ss_pred CCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHH
Confidence 2221 111 11234543 35666788999999999997533
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.6e-22 Score=238.15 Aligned_cols=237 Identities=16% Similarity=0.204 Sum_probs=181.0
Q ss_pred CceeccCCCCCC-CceEEEEeEEC----C---CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEe
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSK----D---DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEV 90 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k----~---~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~ 90 (778)
+..+++.+|.|. | .|++|.-+ . ....|+||.+...... ...+.+..|+++|+.+ +||||+.+++++..
T Consensus 297 ~l~~~~~lg~g~fG--~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~niv~llG~~t~ 373 (609)
T KOG0200|consen 297 NLKLGKYLGEGAFG--QVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNIVNLLGACTQ 373 (609)
T ss_pred hccccceeeccccc--ceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcchhhheeeecc
Confidence 345667888888 8 78888643 1 1457999998765444 5677899999999998 59999999999976
Q ss_pred cccccCCcccEEEEEecCC--cChHHHHHHhC---------cCCC----cchHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 004025 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELG---------LEGS----QRDEYYAWGLNQIAKAVSFLNNDCKLVHGNV 155 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~---------~~~~----~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dL 155 (778)
. ..+++|+||| ++|..+|+... .... ....-+..+.+||+.|+.||++ .++|||||
T Consensus 374 ~--------~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~-~~~vHRDL 444 (609)
T KOG0200|consen 374 D--------GPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLAS-VPCVHRDL 444 (609)
T ss_pred C--------CceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhh-CCccchhh
Confidence 2 3799999999 78999998876 1000 1222345569999999999996 89999999
Q ss_pred CCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccc--cCCCCCCccccccccccccCCCCCcchhHHHHHHHHH
Q 004025 156 CLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWL--VGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYE 233 (778)
Q Consensus 156 kp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~--~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liye 233 (778)
-..||+|+.+..+|++|||+++....... +...... .+..|||||.+.. ..++.++|+||||+++||
T Consensus 445 AaRNVLi~~~~~~kIaDFGlar~~~~~~~-----y~~~~~~~~LP~kWmApEsl~~------~~ft~kSDVWSfGI~L~E 513 (609)
T KOG0200|consen 445 AARNVLITKNKVIKIADFGLARDHYNKDY-----YRTKSSAGTLPVKWMAPESLFD------RVFTSKSDVWSFGILLWE 513 (609)
T ss_pred hhhhEEecCCCEEEEccccceeccCCCCc-----eEecCCCCccceeecCHHHhcc------CcccccchhhHHHHHHHH
Confidence 99999999999999999999997655321 1111111 3457999999886 467889999999999999
Q ss_pred HHh-CCCCCCh----hh----hh------ccCCCCcchHHHHHHHhccCCCCCCChHHHHh
Q 004025 234 LFS-GMRLSKT----EE----LR------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 234 l~t-g~~p~~~----~~----l~------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
+|+ |..|+.. .. ++ ....++..+.++++.|++.+|+.||++.++.+
T Consensus 514 ifsLG~~PYp~~~~~~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 514 IFTLGGTPYPGIPPTEELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred HhhCCCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 999 4556543 11 11 12345667788889999999999999998874
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.6e-22 Score=203.60 Aligned_cols=199 Identities=21% Similarity=0.281 Sum_probs=159.6
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~ 99 (778)
|.+++.++.|. | +||+|+...+++.|+||.+...... ...+.+.+|++.++.++|+||+++++.+...
T Consensus 1 ~~~~~~i~~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~-------- 69 (225)
T smart00221 1 YELGKKLGEGAFG--KVYLARDKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNIVKLYGVFEDP-------- 69 (225)
T ss_pred CceeeEeecCCCe--EEEEEEEcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCChhhheeeeecC--------
Confidence 67788898887 7 9999999988999999999865433 2467889999999999999999999998763
Q ss_pred cEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 100 ~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
...|+++|++ ++|.+++...... .....+..++.|++.+|.|||+ ++++|+||+|.||+++.++.++|+|||++.
T Consensus 70 ~~~~~v~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~lh~-~~i~h~di~~~ni~v~~~~~~~l~d~g~~~ 146 (225)
T smart00221 70 EPLYLVMEYCEGGDLFDYLRKKGGK--LSEEEARFYLRQILEALEYLHS-LGIVHRDLKPENILLGMDGLVKLADFGLAR 146 (225)
T ss_pred CceEEEEeccCCCCHHHHHHhcccC--CCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCCCEEEeeCceee
Confidence 3789999999 3799888775421 2234456679999999999995 899999999999999999999999999988
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCCh
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT 243 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~ 243 (778)
........ ..........|++||...+. ..++.++|+|+||+++|+|++|+.+|..
T Consensus 147 ~~~~~~~~-----~~~~~~~~~~~~~pe~~~~~-----~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 147 FIHRDLAA-----LLKTVKGTPFYLAPEVLLGG-----KGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred EecCcccc-----cccceeccCCcCCHhHhcCC-----CCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 77553200 01112344579999997421 3556699999999999999999998854
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.9e-24 Score=235.24 Aligned_cols=240 Identities=18% Similarity=0.229 Sum_probs=192.6
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
++-+|++..++|+|. | .||+++++.+++..+||+++..... ....+..|+-.++..+||||+.|++.|...
T Consensus 13 P~ddyellqrvgsgTyg--dvyKaRd~~s~elaavkvVkLep~d--d~~~iqqei~~~~dc~h~nivay~gsylr~---- 84 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYG--DVYKARDKRSGELAAVKVVKLEPGD--DFSGIQQEIGMLRDCRHPNIVAYFGSYLRR---- 84 (829)
T ss_pred CccchhheeeecCCccc--chhhhcccccCchhhheeeeccCCc--cccccccceeeeecCCCcChHHHHhhhhhh----
Confidence 567899999999999 8 9999999999999999999875443 356788999999999999999999999864
Q ss_pred CCcccEEEEEecCCc--ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..++|+||||+ +|.+...-- +...+..|++.++..+.+|+|||+ .+-+|||||-.||+++..|++||.||
T Consensus 85 ----dklwicMEycgggslQdiy~~T---gplselqiayvcRetl~gl~ylhs-~gk~hRdiKGanilltd~gDvklaDf 156 (829)
T KOG0576|consen 85 ----DKLWICMEYCGGGSLQDIYHVT---GPLSELQIAYVCRETLQGLKYLHS-QGKIHRDIKGANILLTDEGDVKLADF 156 (829)
T ss_pred ----cCcEEEEEecCCCcccceeeec---ccchhHHHHHHHhhhhccchhhhc-CCcccccccccceeecccCceeeccc
Confidence 37999999994 576543322 233455688889999999999997 88899999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCC-CCChhhhhcc---
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMR-LSKTEELRNT--- 249 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~-p~~~~~l~~~--- 249 (778)
|.+..+... ......+.+++.||+||+..-+ .+.+|...+|+|++|+.-.|+---++ +|+..+.+..
T Consensus 157 gvsaqitat------i~KrksfiGtpywmapEvaave---rkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~Lm 227 (829)
T KOG0576|consen 157 GVSAQITAT------IAKRKSFIGTPYWMAPEVAAVE---RKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLM 227 (829)
T ss_pred Cchhhhhhh------hhhhhcccCCccccchhHHHHH---hcccccccccccccccchhhhhhcCCcccccchHHHHHHh
Confidence 998776542 2224456677788999996421 23467889999999999888876554 4554443322
Q ss_pred -------------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 250 -------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 250 -------------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.+-...+.++++.+|.+||++||+++.+|+|+
T Consensus 228 TkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~ 272 (829)
T KOG0576|consen 228 TKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHP 272 (829)
T ss_pred hccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheece
Confidence 22334578889999999999999999999997
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=3e-22 Score=226.36 Aligned_cols=231 Identities=19% Similarity=0.260 Sum_probs=174.3
Q ss_pred ccCCCCCC-CceEEEEeEECCCCC----cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 24 GDPYPSAW-GSWSHFQGTSKDDGS----PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 24 ~~~lg~g~-g~w~Vy~g~~k~~g~----~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
.+.||.|. | +||+|..--.|+ +|+||++....... ....+..|.-+|..|+|||++++++++..+
T Consensus 701 ~kvLGsgAfG--tV~kGiw~Pege~vKipVaiKvl~~~t~~~-~s~e~LdeAl~masldHpnl~RLLgvc~~s------- 770 (1177)
T KOG1025|consen 701 DKVLGSGAFG--TVYKGIWIPEGENVKIPVAIKVLIEFTSPK-ASIELLDEALRMASLDHPNLLRLLGVCMLS------- 770 (1177)
T ss_pred hceeccccce--eEEeeeEecCCceecceeEEEEeeccCCch-hhHHHHHHHHHHhcCCCchHHHHhhhcccc-------
Confidence 34678888 8 999999865554 78999887654433 344577888999999999999999999863
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
.+.|||+|+ +.|.++++..+. .....+.+-| ++||++||+||| +..+|||||-..||+|.+-..+|+.|||++
T Consensus 771 --~~qlvtq~mP~G~LlDyvr~hr~-~igsq~lLnw-~~QIAkgM~YLe-~qrlVHrdLaaRNVLVksP~hvkitdfgla 845 (1177)
T KOG1025|consen 771 --TLQLVTQLMPLGCLLDYVREHRD-NIGSQDLLNW-CYQIAKGMKYLE-EQRLVHRDLAARNVLVKSPNHVKITDFGLA 845 (1177)
T ss_pred --hHHHHHHhcccchHHHHHHHhhc-cccHHHHHHH-HHHHHHHHHHHH-hcchhhhhhhhhheeecCCCeEEEEecchh
Confidence 588999999 789999987542 2223333444 999999999999 599999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh--------
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR-------- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~-------- 247 (778)
..+..+... +.......+..||+-|.+.. ..++.++|+||||+++||+++ |..|+..-..+
T Consensus 846 ~ll~~d~~e----y~~~~gK~pikwmale~i~~------~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~ 915 (1177)
T KOG1025|consen 846 KLLAPDEKE----YSAPGGKVPIKWMALESIRI------RKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEK 915 (1177)
T ss_pred hccCccccc----ccccccccCcHHHHHHHhhc------cCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhc
Confidence 988764321 11112223346677676654 478899999999999999998 55565432222
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCCChHHHHh
Q 004025 248 -----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 248 -----~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
+....+-.+...+.+||..|+..||.+.++..
T Consensus 916 geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~ 952 (1177)
T KOG1025|consen 916 GERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAE 952 (1177)
T ss_pred cccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHH
Confidence 12233445667788999999999999987754
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.1e-21 Score=239.15 Aligned_cols=199 Identities=21% Similarity=0.203 Sum_probs=136.1
Q ss_pred HhcCCC-CCeeeEeeeeEecccccCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCc
Q 004025 73 LRTVRH-PNILAFLHSTEVENIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKL 150 (778)
Q Consensus 73 Lk~LrH-PnIlk~~d~~e~e~~~g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~i 150 (778)
++.++| +||.++++++.....++ .....+++++|++ .+|.++|.... .......+..+++||+.||.|||+ ++|
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~-~gI 101 (793)
T PLN00181 26 SKSLSHIDYVRSLLGSHKEGNLDG-LDDDSIVRALECEDVSLRQWLDNPD--RSVDAFECFHVFRQIVEIVNAAHS-QGI 101 (793)
T ss_pred cchhhHHHHHHHhhcccCCccccc-cccchhhhhhccCCccHHHHHhccc--ccccHHHHHHHHHHHHHHHHHHHh-CCe
Confidence 455666 67888888773322111 1124688889988 68999997532 112344567789999999999995 999
Q ss_pred cccccCCCCeEEcCCCcEEEEecccccccCCCCCCC-----CC------------------------CccccccccCCCC
Q 004025 151 VHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAA-----NG------------------------PMLQYAWLVGAQY 201 (778)
Q Consensus 151 vH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~-----~~------------------------~~~~~~~~~~~~Y 201 (778)
+||||||+||||+..|.|||+|||++.......... .+ +.......++..|
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 181 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY 181 (793)
T ss_pred eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence 999999999999888888877777765432211000 00 0000112344579
Q ss_pred CCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh--hhcc--CCCC-------cchHHHHHHHhccCCCC
Q 004025 202 KPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE--LRNT--ASIP-------KSLLPDYQRLLSSMPSR 270 (778)
Q Consensus 202 ~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~--l~~~--~~iP-------~~L~~~i~~lL~~dP~~ 270 (778)
+|||++.+ ..++.++|||||||+||||++|.+++.... ...+ ..+| .....++.+||..+|.+
T Consensus 182 ~APE~~~~------~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~P~~ 255 (793)
T PLN00181 182 TSPEEDNG------SSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRHRVLPPQILLNWPKEASFCLWLLHPEPSC 255 (793)
T ss_pred EChhhhcc------CCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHHhhcChhhhhcCHHHHHHHHHhCCCChhh
Confidence 99999876 356789999999999999999887765321 1110 0111 22456678899999999
Q ss_pred CCChHHHHhcc
Q 004025 271 RLNSSKLIENS 281 (778)
Q Consensus 271 Rps~~~lL~~~ 281 (778)
||++.++++|+
T Consensus 256 Rps~~eil~h~ 266 (793)
T PLN00181 256 RPSMSELLQSE 266 (793)
T ss_pred CcChHHHhhch
Confidence 99999999998
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.2e-20 Score=201.93 Aligned_cols=260 Identities=19% Similarity=0.246 Sum_probs=191.2
Q ss_pred CCceeccCCCCCC-CceEEEEeEECC---CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEeccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKD---DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENI 93 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~---~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~ 93 (778)
..|.+.+++|.|. + +||+++... .+..|++|.+...+. ...+.+|++.|..+. +-||+++.+++..++
T Consensus 36 ~~~~~v~kigeGsFs--sv~~a~~~~~~~~~~~valk~i~~ts~----p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd- 108 (418)
T KOG1167|consen 36 NAYKVVNKIGEGSFS--SVYKATDIEQDTKRRYVALKAIYRTSS----PSRILNELEMLYRLGGSDNIIKLNGCFRNND- 108 (418)
T ss_pred hhhhhhccccccchh--hhhhhhHhhhccccceEeeeecccccC----chHHHHHHHHHHHhccchhhhcchhhhccCC-
Confidence 4689999999998 7 899999887 688999999986533 346889999999997 999999999998643
Q ss_pred ccCCcccEEEEEecCCcC--hHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEc-CCCcEEE
Q 004025 94 DATSTKITIYIVTEPVMP--LSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT-QTLDWKL 170 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v~~--L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~-~~g~~KL 170 (778)
...||+||.+. ..+++...+ -..++|+++.++.||.++|. .|||||||||+|++.+ ..+.-.|
T Consensus 109 -------~v~ivlp~~~H~~f~~l~~~l~------~~~i~~Yl~~ll~Al~~~h~-~GIvHRDiKpsNFL~n~~t~rg~L 174 (418)
T KOG1167|consen 109 -------QVAIVLPYFEHDRFRDLYRSLS------LAEIRWYLRNLLKALAHLHK-NGIVHRDIKPSNFLYNRRTQRGVL 174 (418)
T ss_pred -------eeEEEecccCccCHHHHHhcCC------HHHHHHHHHHHHHHhhhhhc-cCccccCCCccccccccccCCceE
Confidence 89999999953 556665543 23378889999999999995 9999999999999998 5688899
Q ss_pred EecccccccCCCC-----------CC------------------CCC---------CccccccccCCCCCCccccccccc
Q 004025 171 HAFDVLSEFDGNN-----------EA------------------ANG---------PMLQYAWLVGAQYKPVELAKSDWT 212 (778)
Q Consensus 171 ~dFgla~~~~~~~-----------~~------------------~~~---------~~~~~~~~~~~~Y~aPE~~~~~~~ 212 (778)
.|||++...+... .. ..+ +.......+++.|+|||++...
T Consensus 175 vDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~-- 252 (418)
T KOG1167|consen 175 VDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRC-- 252 (418)
T ss_pred EechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhc--
Confidence 9999987321100 00 000 1111233456689999998764
Q ss_pred cccCCCCCcchhHHHHHHHHHHHhCCCCCC-h----------------hhhh---------------c------------
Q 004025 213 AVRKSPPWSIDSWGLGCLIYELFSGMRLSK-T----------------EELR---------------N------------ 248 (778)
Q Consensus 213 ~~~~~~~~~~DiwSLG~liyel~tg~~p~~-~----------------~~l~---------------~------------ 248 (778)
...+.++||||.|+++.-++++..||- . ..++ +
T Consensus 253 ---~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~ 329 (418)
T KOG1167|consen 253 ---PRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFE 329 (418)
T ss_pred ---cCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchh
Confidence 356678999999999999999987651 0 0000 0
Q ss_pred ------c--------------CCCCcchHHHHHHHhccCCCCCCChHHHHhcccCCccccccccchhhhhhHHhhhcccC
Q 004025 249 ------T--------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQNKLVDTIHFMEILNLK 308 (778)
Q Consensus 249 ------~--------------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff~n~lv~~~~~Le~l~~k 308 (778)
+ .-+|..+.+++.+||..||.+|+++++.|+|+ ||. ..-++...++.+...
T Consensus 330 s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHp--------FF~-~~~~~~~~~~~~~~~ 400 (418)
T KOG1167|consen 330 TLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHP--------FFD-EADRTERGLQDLLQE 400 (418)
T ss_pred ccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCc--------CCc-chhhhhhhhHHHhhc
Confidence 0 11233577889999999999999999999997 776 333344444433333
Q ss_pred ChhhH
Q 004025 309 DSVEK 313 (778)
Q Consensus 309 ~~~EK 313 (778)
...++
T Consensus 401 ~~~~~ 405 (418)
T KOG1167|consen 401 GTFRK 405 (418)
T ss_pred Cchhh
Confidence 33333
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.7e-20 Score=193.24 Aligned_cols=241 Identities=16% Similarity=0.187 Sum_probs=178.9
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCC-----CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDG-----SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g-----~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~ 92 (778)
.++++...+.+|. | .||.|.+++.. +.|-+|.+.. ...+-+...+..|--.|.-+.|||++.+.++...+.
T Consensus 284 ~Rv~l~~llqEGtFG--ri~~gI~~eEdt~n~~q~v~vKTvk~-~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~ 360 (563)
T KOG1024|consen 284 CRVRLSCLLQEGTFG--RIYRGIWREEDTYNDCQEVLVKTVKQ-HASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDY 360 (563)
T ss_pred hheechhhhhcCchh--heeeeeecccCCcchHHHHHHHHHHh-cccHHHHHHHHHHHHHHhcCcCCCccceeEEEeecc
Confidence 3455555667787 8 89999776433 4555666543 344556777888888999999999999999887543
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCC-----CcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEG-----SQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT 165 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~-----~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~ 165 (778)
..-++++.+. +.|..+|...+... ......+..+..|++.|++|||+ .++||.||-..|.+|++.
T Consensus 361 -------~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~-~~ViHkDiAaRNCvIdd~ 432 (563)
T KOG1024|consen 361 -------ATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHN-HGVIHKDIAARNCVIDDQ 432 (563)
T ss_pred -------CcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHh-cCcccchhhhhcceehhh
Confidence 2445555555 68999988544211 11222355668899999999996 999999999999999999
Q ss_pred CcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCC--
Q 004025 166 LDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSK-- 242 (778)
Q Consensus 166 g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~-- 242 (778)
-.+||+|=.+++.+-..+... ...+-..+..||++|.+.+ ..++.++|+||||++||||++ |+.|+-
T Consensus 433 LqVkltDsaLSRDLFP~DYhc----LGDnEnRPvkWMslEal~n------~~yssasDvWsfGVllWELmtlg~~PyaeI 502 (563)
T KOG1024|consen 433 LQVKLTDSALSRDLFPGDYHC----LGDNENRPVKWMSLEALQN------SHYSSASDVWSFGVLLWELMTLGKLPYAEI 502 (563)
T ss_pred eeEEeccchhccccCcccccc----cCCCCCCcccccCHHHHhh------hhhcchhhhHHHHHHHHHHHhcCCCCcccc
Confidence 999999999988775432111 0111123448999999887 478899999999999999998 555542
Q ss_pred -----------hhhhhccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 243 -----------TEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 243 -----------~~~l~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
+..+.+..++|++|...+.-||...|+.||+++++...
T Consensus 503 DPfEm~~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~c 551 (563)
T KOG1024|consen 503 DPFEMEHYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVIC 551 (563)
T ss_pred CHHHHHHHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHH
Confidence 22344567899999999999999999999999998654
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=1e-20 Score=191.45 Aligned_cols=225 Identities=15% Similarity=0.207 Sum_probs=165.6
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~g~~ 97 (778)
.|+|.+.+|+|. | .+-.+.++.+++.+++|.+.+.. .....+.+|++.---|. |.||+.-|++....
T Consensus 25 ~y~I~k~lgeG~Fg--kIlL~eHr~s~t~ivlKavp~p~---tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt------ 93 (378)
T KOG1345|consen 25 VYTINKQLGEGRFG--KILLAEHRQSKTRIVLKAVPRPQ---TTQADFVREFHYSFFLSPHQHIIDTYEVAFQT------ 93 (378)
T ss_pred hhhHHHHhccccee--eEEeeeccCCceEEEeeccCcch---hhHHHHHHHhccceeeccchhhhHHHHHHhhc------
Confidence 599999999999 8 99999999999999999988643 23456888888766664 88999888765432
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEc--CCCcEEEEec
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT--QTLDWKLHAF 173 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~--~~g~~KL~dF 173 (778)
...+++++||+ ++|...+...+.. +.+.+....|+++||.|+|+ .++||||||.+||+|- +.-.+|||||
T Consensus 94 -~d~YvF~qE~aP~gdL~snv~~~Gig----E~~~K~v~~ql~SAi~fMHs-knlVHRdlK~eNiLif~~df~rvKlcDF 167 (378)
T KOG1345|consen 94 -SDAYVFVQEFAPRGDLRSNVEAAGIG----EANTKKVFAQLLSAIEFMHS-KNLVHRDLKAENILIFDADFYRVKLCDF 167 (378)
T ss_pred -CceEEEeeccCccchhhhhcCccccc----HHHHHHHHHHHHHHHHHhhc-cchhhcccccceEEEecCCccEEEeeec
Confidence 23788999999 7898877765543 33455669999999999995 8999999999999995 3347999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------- 246 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l------- 246 (778)
|..+..+..-. +.. -...|.+||+...- ..-+-......|+|.||+++|.+++|.+|++....
T Consensus 168 G~t~k~g~tV~-----~~~----~~~~y~~pe~~~~~-~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~ 237 (378)
T KOG1345|consen 168 GLTRKVGTTVK-----YLE----YVNNYHAPELCDTV-VNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWE 237 (378)
T ss_pred ccccccCceeh-----hhh----hhcccCCcHHHhhc-cccceEecccccchheeeeeeeeecCCCcchhhhccCchHHH
Confidence 99877654211 111 12368888886532 11112234578999999999999999999864322
Q ss_pred ------hccCCCC-------cchHHHHHHHhccCCCCC
Q 004025 247 ------RNTASIP-------KSLLPDYQRLLSSMPSRR 271 (778)
Q Consensus 247 ------~~~~~iP-------~~L~~~i~~lL~~dP~~R 271 (778)
+....+| ..+...+++-|...++.|
T Consensus 238 ~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~dr 275 (378)
T KOG1345|consen 238 WEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDR 275 (378)
T ss_pred HHHHhcccCccCchhhcccCHHHHHHHHHhcCCccccc
Confidence 1122344 345566778888888888
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.4e-18 Score=191.10 Aligned_cols=169 Identities=12% Similarity=0.072 Sum_probs=123.1
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECC-CCCcEEEEEEeCCCC---chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEe
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKD-DGSPVSIFSISGTNA---QDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~-~g~~VaIK~~~~~~~---~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~ 90 (778)
.....|++++.||.|+ | +||+|+++. +++.|+||++..... .+...+.+++|+++|+.|+|+||+..+..+
T Consensus 15 ~~~~~Y~~~~~IG~G~fg--~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~-- 90 (365)
T PRK09188 15 ALSARFVETAVLKRDVFS--TVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT-- 90 (365)
T ss_pred cccCCceEccEEeecCcE--EEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc--
Confidence 3456799999999998 8 999999876 678889998764311 233456799999999999999998533221
Q ss_pred cccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCcccccc-CCCCeEEcCCCc
Q 004025 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNV-CLSSVVVTQTLD 167 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dL-kp~NI~v~~~g~ 167 (778)
. ..||||||| ++|.. +.. . . . ..++.|++.||.|||+ .+|+|||| ||+||+++.+|.
T Consensus 91 -~--------~~~LVmE~~~G~~L~~-~~~---~--~-~---~~~~~~i~~aL~~lH~-~gIiHrDL~KP~NILv~~~~~ 150 (365)
T PRK09188 91 -G--------KDGLVRGWTEGVPLHL-ARP---H--G-D---PAWFRSAHRALRDLHR-AGITHNDLAKPQNWLMGPDGE 150 (365)
T ss_pred -C--------CcEEEEEccCCCCHHH-hCc---c--c-h---HHHHHHHHHHHHHHHH-CCCeeCCCCCcceEEEcCCCC
Confidence 1 479999999 35652 211 0 1 1 1237899999999995 99999999 999999999999
Q ss_pred EEEEecccccccCCCCCCCCCCcccc----ccccCCCCCCccccccc
Q 004025 168 WKLHAFDVLSEFDGNNEAANGPMLQY----AWLVGAQYKPVELAKSD 210 (778)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~----~~~~~~~Y~aPE~~~~~ 210 (778)
+||+|||+++.+...+.. ..+..+ .......|++||.+...
T Consensus 151 ikLiDFGlA~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 151 AAVIDFQLASVFRRRGAL--YRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred EEEEECccceecccCcch--hhhhhhhhhhhhhccCccCCcccCChh
Confidence 999999999987653211 122111 11233478999988754
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.7e-18 Score=169.84 Aligned_cols=144 Identities=17% Similarity=0.111 Sum_probs=110.7
Q ss_pred cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCC
Q 004025 110 MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGP 189 (778)
Q Consensus 110 ~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~ 189 (778)
++|.+++...+. ......+..+++||+.||.|||+ .+ ||+||+++.+|.+|+ ||++.......
T Consensus 1 GsL~~~l~~~~~--~l~~~~~~~i~~qi~~~L~~lH~-~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~------ 63 (176)
T smart00750 1 VSLADILEVRGR--PLNEEEIWAVCLQCLRALRELHR-QA------KSGNILLTWDGLLKL--DGSVAFKTPEQ------ 63 (176)
T ss_pred CcHHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHh-cC------CcccEeEcCccceee--ccceEeecccc------
Confidence 468888876432 12344566779999999999996 44 999999999999999 99887664421
Q ss_pred ccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-----hhc----cC----------
Q 004025 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-----LRN----TA---------- 250 (778)
Q Consensus 190 ~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-----l~~----~~---------- 250 (778)
..++..|+|||++.+ ..++.++|||||||++|||++|..||.... +.. ..
T Consensus 64 -----~~g~~~y~aPE~~~~------~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (176)
T smart00750 64 -----SRVDPYFMAPEVIQG------QSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNL 132 (176)
T ss_pred -----CCCcccccChHHhcC------CCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccH
Confidence 134568999999976 356789999999999999999998875321 110 01
Q ss_pred -CCCc--chHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 251 -SIPK--SLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 251 -~iP~--~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.++. .+.+++.+||..+|.+||++.++++|+
T Consensus 133 ~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~ 166 (176)
T smart00750 133 ESVSAARSFADFMRVCASRLPQRREAANHYLAHC 166 (176)
T ss_pred HHHHhhhhHHHHHHHHHhcccccccCHHHHHHHH
Confidence 1122 478899999999999999999999997
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.75 E-value=6.4e-19 Score=205.71 Aligned_cols=241 Identities=17% Similarity=0.153 Sum_probs=176.6
Q ss_pred Cce-eccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCC---CCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 20 PYN-IGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGT---NAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 20 ~Y~-i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~---~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
+|- .+..+|.|. | .|+...+....+.+..|.+... ...+ .....+..|+-+-.+|+||||+..++.+..-.
T Consensus 318 ~y~~~~~~~g~ga~g--~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~- 394 (601)
T KOG0590|consen 318 KYGKPGRVLGSGAYG--SVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEID- 394 (601)
T ss_pred ccCCccceeeecccC--ceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcc-
Confidence 453 334556666 6 6888888877777777766521 1122 22223667888888999999988887776532
Q ss_pred ccCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 94 DATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
.++-.|||| .+|...+....... ...+.+.+.|++.||+|||. .+|.|||||++|++++.+|.+||+|
T Consensus 395 -------~~~~~mE~~~~Dlf~~~~~~~~~~---~~e~~c~fKqL~~Gv~y~h~-~GiahrdlK~enll~~~~g~lki~D 463 (601)
T KOG0590|consen 395 -------GILQSMEYCPYDLFSLVMSNGKLT---PLEADCFFKQLLRGVKYLHS-MGLAHRDLKLENLLVTENGILKIID 463 (601)
T ss_pred -------cchhhhhcccHHHHHHHhcccccc---hhhhhHHHHHHHHHHHHHHh-cCceeccCccccEEEecCCceEEee
Confidence 344459999 46888887752221 22244559999999999995 9999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh-----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----- 247 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~----- 247 (778)
||.+..+.-..+.. .....+..+...|+|||++.+. ...+..+|+||.|++++.|.+|+.|+......
T Consensus 464 fg~~~vf~~~~e~~--~~~~~g~~gS~pY~apE~~~~~-----~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~ 536 (601)
T KOG0590|consen 464 FGAASVFRYPWEKN--IHESSGIVGSDPYLAPEVLTGK-----EYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFK 536 (601)
T ss_pred cCcceeeccCcchh--hhhhcCcccCCcCcCccccccc-----ccCcchhhhhhccceEEEEecCCCccccccccccchh
Confidence 99988775532211 1223445566799999998874 45567899999999999999998876422111
Q ss_pred ----------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ----------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ----------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
-...+|...+..+.+||+.+|.+|.+++++++.+
T Consensus 537 ~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~ 586 (601)
T KOG0590|consen 537 TNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDE 586 (601)
T ss_pred hhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhCh
Confidence 0124677788889999999999999999999987
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.6e-16 Score=165.16 Aligned_cols=243 Identities=20% Similarity=0.275 Sum_probs=177.6
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchh-HHHHHHHHHHHHhcCCCC-CeeeEeeeeEecccccCC
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDG-HLAAARNGVKRLRTVRHP-NILAFLHSTEVENIDATS 97 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~-~~~~~~~ev~~Lk~LrHP-nIlk~~d~~e~e~~~g~~ 97 (778)
|.+.+.+|.|. | .||.+.+. ..+++|.+........ ....+.+|+..++.+.|+ +|+++++.+...
T Consensus 2 ~~~~~~l~~g~~~--~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~------ 70 (384)
T COG0515 2 YRILRKLGEGSFG--EVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDE------ 70 (384)
T ss_pred ceeEEeecCCCCe--EEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecC------
Confidence 78888899776 6 89999986 8899999987654442 567789999999999988 799999999553
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC-cEEEEecc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-DWKLHAFD 174 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g-~~KL~dFg 174 (778)
...++++|++ ..|.+++................++.|++.+|.|+|. .+++|||+||+||+++..+ ..|++|||
T Consensus 71 --~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~-~~~~hrd~kp~nil~~~~~~~~~l~dfg 147 (384)
T COG0515 71 --GSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHS-KGIIHRDIKPENILLDRDGRVVKLIDFG 147 (384)
T ss_pred --CEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHeeecCCCCeEEEeccC
Confidence 3589999999 3577666554311122334456669999999999995 8899999999999999988 79999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----h---
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R--- 247 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~--- 247 (778)
.+....................+...|++||.+.+.- ........|+|++|+++++++.|..|+..... .
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~---~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~ 224 (384)
T COG0515 148 LAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLS---LAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTL 224 (384)
T ss_pred cceecCCCCccccccccccccccccccCCHHHhcCCC---CCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHH
Confidence 9986654321110000122335566999999987620 02466789999999999999999877643321 0
Q ss_pred -cc---------CCCC--------cchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 -NT---------ASIP--------KSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 -~~---------~~iP--------~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
.+ ..+. ..+...+.+++..+|..|.+......+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 225 KIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred HHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 00 0111 246677889999999999988766654
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.7e-17 Score=172.22 Aligned_cols=240 Identities=15% Similarity=0.160 Sum_probs=144.8
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCC----------CCCeeeEeee
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVR----------HPNILAFLHS 87 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~Lr----------HPnIlk~~d~ 87 (778)
.+..++.||.|+ + .||.+++..+|++++||++...... ....+.+++|.-....+. |-.++.-+|.
T Consensus 13 ~l~~~~~i~~g~~~--~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~ 90 (288)
T PF14531_consen 13 TLVRGRIIGKGGFS--IVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDL 90 (288)
T ss_dssp EEEEEEEEEEETTE--EEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEE
T ss_pred EEEEccccccCCce--EEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEE
Confidence 456777888886 5 8999999999999999998865422 234556666654444332 2233334444
Q ss_pred eEeccccc---CCccc------EEEEEecCC-cChHHHHHH---hCcCCCcchHHHHHH-HHHHHHHHHHHHcCCCcccc
Q 004025 88 TEVENIDA---TSTKI------TIYIVTEPV-MPLSEKIKE---LGLEGSQRDEYYAWG-LNQIAKAVSFLNNDCKLVHG 153 (778)
Q Consensus 88 ~e~e~~~g---~~~~~------~lyIVtE~v-~~L~~~L~~---~~~~~~~~~~~i~~g-l~QI~~aL~fLH~~~~ivH~ 153 (778)
........ .+.+. ..+++++.. ++|..++.. ............+.. ..|+++.+++||. .+++|+
T Consensus 91 ~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~-~GlVHg 169 (288)
T PF14531_consen 91 LRIPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHS-YGLVHG 169 (288)
T ss_dssp EEETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH-TTEEES
T ss_pred EEEcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhh-cceEec
Confidence 33211000 00011 235666666 577766553 222211111122222 4899999999996 899999
Q ss_pred ccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccc--cccccCCCCCcchhHHHHHHH
Q 004025 154 NVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSD--WTAVRKSPPWSIDSWGLGCLI 231 (778)
Q Consensus 154 dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~--~~~~~~~~~~~~DiwSLG~li 231 (778)
||+|+|+|++.+|.++|+||+.+...+.. + .. ...+..|.|||..... +......++.+.|.|+||++|
T Consensus 170 di~~~nfll~~~G~v~Lg~F~~~~r~g~~-------~-~~-~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~l 240 (288)
T PF14531_consen 170 DIKPENFLLDQDGGVFLGDFSSLVRAGTR-------Y-RC-SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITL 240 (288)
T ss_dssp T-SGGGEEE-TTS-EEE--GGGEEETTEE-------E-EG-GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHH
T ss_pred ccceeeEEEcCCCCEEEcChHHHeecCce-------e-ec-cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHH
Confidence 99999999999999999999988766541 1 11 2334579999986431 111112356789999999999
Q ss_pred HHHHhCCCCCChh--------hhhccCCCCcchHHHHHHHhccCCCCC
Q 004025 232 YELFSGMRLSKTE--------ELRNTASIPKSLLPDYQRLLSSMPSRR 271 (778)
Q Consensus 232 yel~tg~~p~~~~--------~l~~~~~iP~~L~~~i~~lL~~dP~~R 271 (778)
|.|+++..||... ....+.++|..+..+++.||+.||..|
T Consensus 241 y~lWC~~lPf~~~~~~~~~~~~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 241 YSLWCGRLPFGLSSPEADPEWDFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHHSS-STCCCGGGSTSGGGGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred HHHHHccCCCCCCCccccccccchhcCCcCHHHHHHHHHHccCCcccC
Confidence 9999999887521 344556899999999999999999887
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.6e-16 Score=168.29 Aligned_cols=192 Identities=18% Similarity=0.167 Sum_probs=132.2
Q ss_pred CCCCeeeEeeeeEecc-------------------cccCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHH
Q 004025 77 RHPNILAFLHSTEVEN-------------------IDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQ 136 (778)
Q Consensus 77 rHPnIlk~~d~~e~e~-------------------~~g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~Q 136 (778)
+||||++++..|.++- ..|-+.+.++|+||..+ ..|..++..+.... ..-..++.|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~~~~s~----r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWTRHRSY----RTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhcCCCch----HHHHHHHHH
Confidence 6999999998886532 11223467999999998 68999998765432 222344999
Q ss_pred HHHHHHHHHcCCCccccccCCCCeEEcCC--C--cEEEEecccccccCCCCCCCCCCcccc-ccccCC-CCCCccccccc
Q 004025 137 IAKAVSFLNNDCKLVHGNVCLSSVVVTQT--L--DWKLHAFDVLSEFDGNNEAANGPMLQY-AWLVGA-QYKPVELAKSD 210 (778)
Q Consensus 137 I~~aL~fLH~~~~ivH~dLkp~NI~v~~~--g--~~KL~dFgla~~~~~~~~~~~~~~~~~-~~~~~~-~Y~aPE~~~~~ 210 (778)
+++|+.||| +.++.|||+|.+||+|.-+ + .+.|.|||+|---+.-+ -.-++... ...++. ..|+||+...-
T Consensus 350 lLEav~hL~-~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hG--lqlpy~S~~Vd~GGNa~lmAPEi~ta~ 426 (598)
T KOG4158|consen 350 LLEAVTHLH-KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHG--LQLPYESDEVDLGGNAKLMAPEIATAV 426 (598)
T ss_pred HHHHHHHHH-HccchhhcccccceEEEecCCCCcEEEEcccceeeeccccc--cccccccccccCCCcceecchhhhhcC
Confidence 999999999 4999999999999999633 2 37899999875433211 11122111 123343 67999997531
Q ss_pred cccccCCCCCcchhHHHHHHHHHHHhCCCCCChh----------hhhcc----CCCCcchHHHHHHHhccCCCCCCChH
Q 004025 211 WTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----------ELRNT----ASIPKSLLPDYQRLLSSMPSRRLNSS 275 (778)
Q Consensus 211 ~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~----------~l~~~----~~iP~~L~~~i~~lL~~dP~~Rps~~ 275 (778)
-.....-.-.++|.|+.|.+-||+|....||... +-.++ ..+|+.+++++..+|+.||.+|+++.
T Consensus 427 PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~ 505 (598)
T KOG4158|consen 427 PGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPN 505 (598)
T ss_pred CCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCCCcccCChHHHHHHHHHhcCCccccCCcc
Confidence 1000011224899999999999999988777431 11112 45777889999999999999999974
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.7e-15 Score=165.66 Aligned_cols=203 Identities=14% Similarity=0.106 Sum_probs=153.0
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCC-CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCC----CCeeeEeeeeE-ecc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDG-SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRH----PNILAFLHSTE-VEN 92 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g-~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrH----PnIlk~~d~~e-~e~ 92 (778)
.|.+.++||.|+ | .||.|.+..++ ..+++|+-........ ..++.|+.+++.+.+ +++..+++... .
T Consensus 19 ~~~i~~~iG~G~fG--~V~~v~~~~~~~~~~a~K~e~~~~~~~~--~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~-- 92 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFG--AVYLVSDKSEKNKEYAKKLEKKELGSKP--SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRST-- 92 (322)
T ss_pred ceEEeeeccccCCc--eEEEEEecCCCCeeEEEEEEEecccCCC--ccchhHHHHHHHHhhhcCCCCCCEEEEeccCC--
Confidence 899999999998 9 99999998775 5788887765322221 157788899998873 58889998884 3
Q ss_pred cccCCcccEEEEEecCCc-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC-----C
Q 004025 93 IDATSTKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT-----L 166 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~-----g 166 (778)
..+-||||+.++ +|.++.+... ........+..+..|++.+|.+||+ .+++||||||+|+.+... .
T Consensus 93 ------~~~~~iVM~l~G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~-~G~iHRDiKp~N~~~g~~~~~~~~ 164 (322)
T KOG1164|consen 93 ------EDFNFIVMSLLGPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHS-KGFIHRDIKPENFVVGQSSRSEVR 164 (322)
T ss_pred ------CceeEEEEeccCccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHh-cCcccCCcCHHHeeecCCCCcccc
Confidence 348899999996 5888776655 3334445566668999999999995 999999999999999865 3
Q ss_pred cEEEEeccccc--ccCCCCCCCCCCcc--ccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 004025 167 DWKLHAFDVLS--EFDGNNEAANGPML--QYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSK 242 (778)
Q Consensus 167 ~~KL~dFgla~--~~~~~~~~~~~~~~--~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~ 242 (778)
.+.|.|||+++ .+.........+.. ...+.++.+|.++....+ ...+..-|+||++.++.|++.|..|+.
T Consensus 165 ~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~------~e~~r~DDles~~Y~l~el~~g~LPW~ 238 (322)
T KOG1164|consen 165 TLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLG------IEQGRRDDLESLFYMLLELLKGSLPWE 238 (322)
T ss_pred eEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCC------CccCCchhhhhHHHHHHHHhcCCCCCc
Confidence 59999999998 33222211101111 123346679999998776 467789999999999999999977653
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.66 E-value=7.5e-16 Score=160.31 Aligned_cols=204 Identities=13% Similarity=0.149 Sum_probs=164.3
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEeccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENI 93 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~ 93 (778)
+-...|.+|++||+|. | .+|.|+..-+|++||||.-..++ ....++.|.+..|.|. .++|..++.+...
T Consensus 25 ~VG~hyrVGkKIGeGsFG--~lf~G~Nl~nne~VAIKfEPrkS----~APQLrdEYr~YKlL~g~~GIP~vYYFGqe--- 95 (449)
T KOG1165|consen 25 MVGPHYRVGKKIGEGSFG--VLFLGKNLYNNEPVAIKFEPRKS----EAPQLRDEYRTYKLLGGTEGIPQVYYFGQE--- 95 (449)
T ss_pred EecccceeccccccCcce--eeecccccccCceEEEEeccccC----CcchHHHHHHHHHHHcCCCCCCceeeeccc---
Confidence 4456899999999999 9 99999999999999999866543 3456888999888886 7899998877664
Q ss_pred ccCCcccEEEEEecCCcC-hHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC-----c
Q 004025 94 DATSTKITIYIVTEPVMP-LSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-----D 167 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v~~-L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g-----~ 167 (778)
+.+-.+|+|.++| |.+++.-++.. .....+..+..|++.-+.++|+ ..+|.|||||+|++|..-| .
T Consensus 96 -----G~~NiLVidLLGPSLEDLFD~CgR~--FSvKTV~miA~Qmi~rie~vH~-k~LIYRDIKPdNFLIGrp~~k~~n~ 167 (449)
T KOG1165|consen 96 -----GKYNILVIDLLGPSLEDLFDLCGRR--FSVKTVAMIAKQMITRIEYVHE-KDLIYRDIKPDNFLIGRPGTKDANV 167 (449)
T ss_pred -----cchhhhhhhhhCcCHHHHHHHhcCc--ccHHhHHHHHHHHHHHHHHHHh-cceeecccCccceeecCCCCCCCce
Confidence 3477899999975 88877766532 2334567779999999999995 8999999999999997443 4
Q ss_pred EEEEecccccccCCCCCCCCCCccccccccCC-CCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 004025 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSK 242 (778)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~-~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~ 242 (778)
+.++|||++..+.+.......|+.....+.++ +||+--...+ ...+..-|+=+||.++++.+-|..|+.
T Consensus 168 IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlG------rEQSRRDDLEaLGHvFmYFLRGsLPWQ 237 (449)
T KOG1165|consen 168 IHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLG------REQSRRDDLEALGHVFMYFLRGSLPWQ 237 (449)
T ss_pred EEEEeccchhhhcCccccccCccccccccccceeeeEeecccc------chhhhhhhHHHhhhhhhhhccCCCccc
Confidence 99999999999988765555577666666555 9999776665 455678899999999999999987764
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.5e-16 Score=157.09 Aligned_cols=139 Identities=12% Similarity=0.087 Sum_probs=100.4
Q ss_pred ccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchh------------------------HHHHHHHHHHHHhcCCC
Q 004025 24 GDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDG------------------------HLAAARNGVKRLRTVRH 78 (778)
Q Consensus 24 ~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~------------------------~~~~~~~ev~~Lk~LrH 78 (778)
.+.||.|+ | +||.|.++ +|+.|+||++........ ......+|++.|+.|.|
T Consensus 2 ~~~ig~G~~~--~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~ 78 (190)
T cd05147 2 NGCISTGKEA--NVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVT 78 (190)
T ss_pred CCccccccce--EEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 46788888 8 99999987 899999999975421100 01234569999999998
Q ss_pred CCeeeEeeeeEecccccCCcccEEEEEecCCc--ChHHH-HHHhCcCCCcchHHHHHHHHHHHHHHHHH-HcCCCccccc
Q 004025 79 PNILAFLHSTEVENIDATSTKITIYIVTEPVM--PLSEK-IKELGLEGSQRDEYYAWGLNQIAKAVSFL-NNDCKLVHGN 154 (778)
Q Consensus 79 PnIlk~~d~~e~e~~~g~~~~~~lyIVtE~v~--~L~~~-L~~~~~~~~~~~~~i~~gl~QI~~aL~fL-H~~~~ivH~d 154 (778)
++|..... +... ..|||||||+ .|... ++... ...+.+..++.||+.+|.+| |+ ++++|||
T Consensus 79 ~~v~~p~~-~~~~---------~~~iVmE~i~g~~l~~~~~~~~~----~~~~~~~~i~~qi~~~L~~l~H~-~giiHrD 143 (190)
T cd05147 79 AGIPCPEP-ILLK---------SHVLVMEFIGDDGWAAPRLKDAP----LSESKARELYLQVIQIMRILYQD-CRLVHAD 143 (190)
T ss_pred CCCCCCcE-EEec---------CCEEEEEEeCCCCCcchhhhcCC----CCHHHHHHHHHHHHHHHHHHHHh-CCcccCC
Confidence 88743322 2221 2389999994 34333 32222 12344566699999999999 64 8999999
Q ss_pred cCCCCeEEcCCCcEEEEecccccccCC
Q 004025 155 VCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (778)
Q Consensus 155 Lkp~NI~v~~~g~~KL~dFgla~~~~~ 181 (778)
|||+||+++ +|.++|+|||++.....
T Consensus 144 lkP~NIli~-~~~v~LiDFG~a~~~~~ 169 (190)
T cd05147 144 LSEYNLLYH-DGKLYIIDVSQSVEHDH 169 (190)
T ss_pred CCHHHEEEE-CCcEEEEEccccccCCC
Confidence 999999998 58899999999986643
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.9e-15 Score=152.56 Aligned_cols=141 Identities=13% Similarity=0.105 Sum_probs=104.1
Q ss_pred eccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch------------------------hHHHHHHHHHHHHhcCC
Q 004025 23 IGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD------------------------GHLAAARNGVKRLRTVR 77 (778)
Q Consensus 23 i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~------------------------~~~~~~~~ev~~Lk~Lr 77 (778)
|.+.||.|+ | .||+|++. +|+.|+||++....... .....+++|++.+.+++
T Consensus 1 ~~~~ig~G~~~--~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 77 (190)
T cd05145 1 INGCISTGKEA--NVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLY 77 (190)
T ss_pred CCceeecCCCc--EEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 356788888 8 99999987 89999999998652110 01233568999999999
Q ss_pred CCCeeeEeeeeEecccccCCcccEEEEEecCCcC--hH-HHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccc
Q 004025 78 HPNILAFLHSTEVENIDATSTKITIYIVTEPVMP--LS-EKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154 (778)
Q Consensus 78 HPnIlk~~d~~e~e~~~g~~~~~~lyIVtE~v~~--L~-~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~d 154 (778)
|++|......... ..||||||+.. +. ..+..... .......++.|++.+|.+||...+++|||
T Consensus 78 ~~~i~~p~~~~~~----------~~~lVmE~~~g~~~~~~~l~~~~~----~~~~~~~i~~~l~~~l~~lH~~~givHrD 143 (190)
T cd05145 78 EAGVPVPEPILLK----------KNVLVMEFIGDDGSPAPRLKDVPL----EEEEAEELYEQVVEQMRRLYQEAGLVHGD 143 (190)
T ss_pred hCCCCCceEEEec----------CCEEEEEEecCCCchhhhhhhccC----CHHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence 9987544333322 24899999942 33 33433222 22334556899999999999548999999
Q ss_pred cCCCCeEEcCCCcEEEEecccccccCC
Q 004025 155 VCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (778)
Q Consensus 155 Lkp~NI~v~~~g~~KL~dFgla~~~~~ 181 (778)
|||+||+++ +|.++|+|||+++.+..
T Consensus 144 lkP~NIll~-~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 144 LSEYNILYH-DGKPYIIDVSQAVELDH 169 (190)
T ss_pred CChhhEEEE-CCCEEEEEcccceecCC
Confidence 999999998 89999999999987754
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.2e-15 Score=156.95 Aligned_cols=177 Identities=8% Similarity=0.016 Sum_probs=125.9
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHH------HHHHHHHHhcCCCCCeeeEeeeeE
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAA------ARNGVKRLRTVRHPNILAFLHSTE 89 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~------~~~ev~~Lk~LrHPnIlk~~d~~e 89 (778)
+.+|.+.+.++.|+ | .||.... ++..|+||++..+.... ..... +.+|++.+.+|+||||..+.+.++
T Consensus 30 ~~~y~~~~~l~~~~f~--~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~ 105 (232)
T PRK10359 30 SYNIKTIKVFRNIDDT--KVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYL 105 (232)
T ss_pred hCceEEEEEecCCCce--EEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeee
Confidence 56899999999887 7 8998644 57789999997554332 22223 679999999999999999999877
Q ss_pred ecccccCCcccEEEEEecCCc--ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCc
Q 004025 90 VENIDATSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD 167 (778)
Q Consensus 90 ~e~~~g~~~~~~lyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~ 167 (778)
........-....|||||||. +|.++.. ...+ . +.+|+.+|..||. .+++|||++|+||+++.+|
T Consensus 106 ~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~~-~---~~~i~~~l~~lH~-~gi~H~Dikp~Nili~~~g- 172 (232)
T PRK10359 106 LAERKTLRYAHTYIMLIEYIEGVELNDMPE-------ISED-V---KAKIKASIESLHQ-HGMVSGDPHKGNFIVSKNG- 172 (232)
T ss_pred ecccccccccCCeEEEEEEECCccHHHhhh-------ccHH-H---HHHHHHHHHHHHH-cCCccCCCChHHEEEeCCC-
Confidence 532110000125899999994 5766521 1122 2 6799999999995 9999999999999999999
Q ss_pred EEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHH
Q 004025 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELF 235 (778)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~ 235 (778)
++|+|||..+........ . . +... ..+..++|+|+||+.+..+.
T Consensus 173 i~liDfg~~~~~~e~~a~---d----------~-----~vle------r~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 173 LRIIDLSGKRCTAQRKAK---D----------R-----IDLE------RHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEEEECCCcccccchhhH---H----------H-----HHHH------hHhcccccccceeEeehHHH
Confidence 999999988766432100 0 0 1111 23446899999999876544
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.4e-14 Score=146.46 Aligned_cols=136 Identities=13% Similarity=0.106 Sum_probs=102.1
Q ss_pred eccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-----CCCCeeeEeeeeEecccccC
Q 004025 23 IGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-----RHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 23 i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-----rHPnIlk~~d~~e~e~~~g~ 96 (778)
-.+.||.|+ | .||. ++.++.. +||++..... ...+.+.+|++.++.| .||||++++++++++.+.
T Consensus 6 ~~~~LG~G~~~--~Vy~--hp~~~~k-~IKv~~~~~~--~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~-- 76 (210)
T PRK10345 6 EQSPLGTGRHR--KCYA--HPEDAQR-CIKIVYHRGD--GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGT-- 76 (210)
T ss_pred CcceecCCCce--EEEE--CCCCcCe-EEEEEecccc--chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCC--
Confidence 346789988 7 8995 7777666 5999876422 2345689999999999 579999999999986533
Q ss_pred CcccEEE-EEecCCc----ChHHHHHHhCcCCCcchHHHHHHHHHHHHHH-HHHHcCCCccccccCCCCeEEcCC----C
Q 004025 97 STKITIY-IVTEPVM----PLSEKIKELGLEGSQRDEYYAWGLNQIAKAV-SFLNNDCKLVHGNVCLSSVVVTQT----L 166 (778)
Q Consensus 97 ~~~~~ly-IVtE~v~----~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL-~fLH~~~~ivH~dLkp~NI~v~~~----g 166 (778)
..+| +|+||++ +|.+++++... .+.. ..+.|++.++ .|||+ .+|+||||||+||+++.. +
T Consensus 77 ---g~v~~~I~e~~G~~~~tL~~~l~~~~~-----~e~~-~~~~~~L~~l~~yLh~-~~IvhrDlKp~NILl~~~~~~~~ 146 (210)
T PRK10345 77 ---GYVYDVIADFDGKPSITLTEFAEQCRY-----EEDV-AQLRQLLKKLKRYLLD-NRIVTMELKPQNILCQRISESEV 146 (210)
T ss_pred ---eEEEEEEecCCCCcchhHHHHHHcccc-----cHhH-HHHHHHHHHHHHHHHH-CCEeecCCCHHHEEEeccCCCCC
Confidence 2544 7899953 69999976432 1112 2378888888 89995 999999999999999743 3
Q ss_pred cEEEEeccccc
Q 004025 167 DWKLHAFDVLS 177 (778)
Q Consensus 167 ~~KL~dFgla~ 177 (778)
.++|+||+.+.
T Consensus 147 ~~~LiDg~G~~ 157 (210)
T PRK10345 147 IPVVCDNIGES 157 (210)
T ss_pred cEEEEECCCCc
Confidence 79999955443
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.2e-15 Score=171.36 Aligned_cols=214 Identities=15% Similarity=0.237 Sum_probs=161.8
Q ss_pred EeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecccccCCcccEEEEEecCCc--ChHH
Q 004025 38 QGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATSTKITIYIVTEPVM--PLSE 114 (778)
Q Consensus 38 ~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~g~~~~~~lyIVtE~v~--~L~~ 114 (778)
++...+.|.-+++|+..+..........-+.|-.++..++ ||.+++.+..++++. .+|++.+++. .|..
T Consensus 15 k~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~--------kl~l~ld~~rgg~lft 86 (612)
T KOG0603|consen 15 KAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDG--------KLYLILDFLRGGDLFT 86 (612)
T ss_pred HhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeecccc--------chhHhhhhcccchhhh
Confidence 3344556788888888776544333335566777888887 999999999999854 8999999993 5665
Q ss_pred HHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccc
Q 004025 115 KIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYA 194 (778)
Q Consensus 115 ~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~ 194 (778)
.+..... ...+..+..+..++-|+.++| +.+++|+|+|++||+++.+|.+|+.|||+.+..-....
T Consensus 87 ~l~~~~~---f~~~~~~~~~aelaLald~lh-~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~---------- 152 (612)
T KOG0603|consen 87 RLSKEVM---FDELDVAFYLAELALALDHLH-KLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI---------- 152 (612)
T ss_pred ccccCCc---hHHHHHHHHHHHHHHHHhhcc-hhHHHHhcccccceeecccCccccCCchhhhHhHhhhh----------
Confidence 5554332 233446666899999999999 49999999999999999999999999999987754321
Q ss_pred cccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhcc----CCCCcch----HHHHHHHhcc
Q 004025 195 WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT----ASIPKSL----LPDYQRLLSS 266 (778)
Q Consensus 195 ~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~~----~~iP~~L----~~~i~~lL~~ 266 (778)
.+++..||+||++++ ...++|.||||+++|||++|..+|..+..+.+ ..+|..+ ...+..|+..
T Consensus 153 ~cgt~eymApEI~~g--------h~~a~D~ws~gvl~felltg~~pf~~~~~~~Il~~~~~~p~~l~~~a~~~~~~l~~r 224 (612)
T KOG0603|consen 153 ACGTYEYRAPEIING--------HLSAADWWSFGVLAFELLTGTLPFGGDTMKRILKAELEMPRELSAEARSLFRQLFKR 224 (612)
T ss_pred cccchhhhhhHhhhc--------cCCcccchhhhhhHHHHhhCCCCCchHHHHHHhhhccCCchhhhHHHHHHHHHHHhh
Confidence 134558999999884 34689999999999999999999988655544 2355544 4556778888
Q ss_pred CCCCCCCh-----HHHHhcc
Q 004025 267 MPSRRLNS-----SKLIENS 281 (778)
Q Consensus 267 dP~~Rps~-----~~lL~~~ 281 (778)
+|..|.-. .++.+|+
T Consensus 225 ~p~nrLg~~~~~~~eik~h~ 244 (612)
T KOG0603|consen 225 NPENRLGAGPDGVDEIKQHE 244 (612)
T ss_pred CHHHHhccCcchhHHHhccc
Confidence 99999865 4555664
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.8e-14 Score=142.94 Aligned_cols=203 Identities=13% Similarity=0.081 Sum_probs=149.0
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCC-CCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRH-PNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrH-PnIlk~~d~~e~e~~~ 94 (778)
..-.|.+.++||+|+ | .+|.|....+|+.||||+-..+. . ..++..|.++-+.|+| .+|..+..+..+
T Consensus 13 v~gky~lvrkiGsGSFG--dIy~~~~i~~ge~VAiK~Es~~a-~---hpqL~yEskvY~iL~~g~GiP~i~~y~~e---- 82 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFG--DIYLGISITSGEEVAIKLESSKA-K---HPQLLYESKVYRILQGGVGIPHIRHYGTE---- 82 (341)
T ss_pred eccceEEEEeecCCchh--heeeeeeccCCceEEEEeecccC-C---CcchhHHHHHHHHhccCCCCchhhhhccc----
Confidence 345799999999999 9 99999999999999999965432 2 2356678888888874 566666666654
Q ss_pred cCCcccEEEEEecCCcC-hHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEc---CCCcEEE
Q 004025 95 ATSTKITIYIVTEPVMP-LSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT---QTLDWKL 170 (778)
Q Consensus 95 g~~~~~~lyIVtE~v~~-L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~---~~g~~KL 170 (778)
+.+-.+|||..+| |.+++.-.... .....+....-|++.-+.|+|. .+++||||||+|++.. ....+.|
T Consensus 83 ----~~ynvlVMdLLGPsLEdLfnfC~R~--ftmkTvLMLaDQml~RiEyvH~-r~fiHRDIKPdNFLMGlgrh~~kl~L 155 (341)
T KOG1163|consen 83 ----KDYNVLVMDLLGPSLEDLFNFCSRR--FTMKTVLMLADQMLSRIEYVHL-RNFIHRDIKPDNFLMGLGRHCNKLYL 155 (341)
T ss_pred ----cccceeeeeccCccHHHHHHHHhhh--hhHHhHHHHHHHHHHHHHHHHh-hccccccCCccceeeccccccceEEE
Confidence 3477999999976 76666543321 1122344557899999999996 8999999999999996 3456999
Q ss_pred EecccccccCCCCCCCCCCcccccc-ccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAW-LVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSK 242 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~-~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~ 242 (778)
+|||++..+.+.......|+..... .++.+|.+--...+ ...+..-|+=|+|.++.++--|..|++
T Consensus 156 IDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g------~eqSRRDDmeSvgYvLmYfnrG~LPWQ 222 (341)
T KOG1163|consen 156 IDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLG------IEQSRRDDMESVGYVLMYFNRGSLPWQ 222 (341)
T ss_pred EeccchhhhccccccccCccccCCccceeeeehhhhhhhh------hhhhhhhhhhhhcceeeeeecCCCccc
Confidence 9999999887654444445544433 34448887555443 233457899999999888877877764
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=4e-14 Score=143.09 Aligned_cols=191 Identities=12% Similarity=0.070 Sum_probs=129.8
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc--hhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEeccccc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ--DGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDA 95 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~--~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~g 95 (778)
++.+...++.+. | +||.+.. .+.+|..+.+...... .-....+++|+++|++|. |++|.+++++.
T Consensus 3 ~~~~~~~l~~~~f~--~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~------- 71 (218)
T PRK12274 3 PPAVNEPLKSDTFG--RILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD------- 71 (218)
T ss_pred CcccceeecCCCcc--eEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc-------
Confidence 455667788887 8 8997665 6888888887654221 111236889999999996 58899998851
Q ss_pred CCcccEEEEEecCC-c-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCcccccc-CCCCeEEcCCCcEEEEe
Q 004025 96 TSTKITIYIVTEPV-M-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNV-CLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dL-kp~NI~v~~~g~~KL~d 172 (778)
..|++|||+ + +|...+.. + . ...+.|++.+|.+||. .+++|||| ||+||+++.+|.++|+|
T Consensus 72 -----~~~lvmeyI~G~~L~~~~~~----~---~---~~~~~qi~~~L~~lH~-~GIvHrDL~kp~NILv~~~g~i~LID 135 (218)
T PRK12274 72 -----GRHLDRSYLAGAAMYQRPPR----G---D---LAYFRAARRLLQQLHR-CGVAHNDLAKEANWLVQEDGSPAVID 135 (218)
T ss_pred -----CEEEEEeeecCccHHhhhhh----h---h---HHHHHHHHHHHHHHHH-CcCccCCCCCcceEEEcCCCCEEEEE
Confidence 369999998 3 56543321 0 1 1237899999999995 99999999 79999999999999999
Q ss_pred cccccccCCCCCC------CC-CCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCC
Q 004025 173 FDVLSEFDGNNEA------AN-GPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLS 241 (778)
Q Consensus 173 Fgla~~~~~~~~~------~~-~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~ 241 (778)
||++......... .+ ..+..+-....+.|+.|+...-- ....-...+.++.|+-+|.+++++.++
T Consensus 136 FG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l----~~~~~~~~~w~~~g~~~~~~~~~~~~~ 207 (218)
T PRK12274 136 FQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVL----KRTSWIRELWFATGKPVYRFVTRRVLH 207 (218)
T ss_pred CCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhh----ccchhHHHHHHHhcchHHHHHhccCCc
Confidence 9999865542210 00 00011111123466777654321 111114678999999999999988654
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.3e-14 Score=147.09 Aligned_cols=229 Identities=14% Similarity=0.160 Sum_probs=156.3
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~ 99 (778)
..+..++.... | .+|+|++. |..+.+|++....-.......+..|+-.|+...||||+.+++.+.. +
T Consensus 192 lnl~tkl~e~hsg--elwrgrwq--gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacns--------p 259 (448)
T KOG0195|consen 192 LNLITKLAESHSG--ELWRGRWQ--GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNS--------P 259 (448)
T ss_pred hhhhhhhccCCCc--cccccccc--CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccC--------C
Confidence 34445555544 6 78889885 5566778877654444455668889999999999999999999976 4
Q ss_pred cEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCcccc-ccCCCCeEEcCCCcEEEE--ecc
Q 004025 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHG-NVCLSSVVVTQTLDWKLH--AFD 174 (778)
Q Consensus 100 ~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~-dLkp~NI~v~~~g~~KL~--dFg 174 (778)
..+.+++.|+ ++|+.+|.+....-..... -......|++|+.|||+-..++-+ -|+...|+|+++-.-+|. |--
T Consensus 260 pnlv~isq~mp~gslynvlhe~t~vvvd~sq-av~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~k 338 (448)
T KOG0195|consen 260 PNLVIISQYMPFGSLYNVLHEQTSVVVDHSQ-AVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTK 338 (448)
T ss_pred CCceEeeeeccchHHHHHHhcCccEEEecch-HHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccce
Confidence 5899999998 7899999875421111111 123378999999999984455544 688899999988766553 211
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------ 248 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~------ 248 (778)
++ +.. ......+.||+||.+...-. ...-.++|||||++++||+-+...||..-...+
T Consensus 339 fs--fqe-----------~gr~y~pawmspealqrkpe---d~n~raadmwsfaillwel~trevpfadlspmecgmkia 402 (448)
T KOG0195|consen 339 FS--FQE-----------VGRAYSPAWMSPEALQRKPE---DLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIA 402 (448)
T ss_pred ee--eec-----------cccccCcccCCHHHHhcCch---hcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhh
Confidence 11 111 11122357899998765321 223458999999999999999988875321111
Q ss_pred ----cCCCCcchH----HHHHHHhccCCCCCCChHHHH
Q 004025 249 ----TASIPKSLL----PDYQRLLSSMPSRRLNSSKLI 278 (778)
Q Consensus 249 ----~~~iP~~L~----~~i~~lL~~dP~~Rps~~~lL 278 (778)
...||+.+. .++.-|++.||.+||.++.++
T Consensus 403 leglrv~ippgis~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 403 LEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred hccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence 245666554 556668889999999987654
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.51 E-value=7.5e-15 Score=162.05 Aligned_cols=168 Identities=18% Similarity=0.222 Sum_probs=122.9
Q ss_pred cEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 100 ~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
.++||.|+.| ..|.++|...........-..+..+.|++.|+.| .+.+|+|+||.|||...++.+||+|||+.+
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y----k~~ihrdlkp~nif~~~d~q~kIgDFgl~t 404 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY----KGLIHRDLKPSNIFFSDDDQLKIGDFGLVT 404 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh----ccchhhhccccccccccchhhhhhhhhhee
Confidence 3799999999 4799999866554443344455569999999999 689999999999999999999999999998
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhC-CCCCC-hhhhhc--cCCCC
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG-MRLSK-TEELRN--TASIP 253 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg-~~p~~-~~~l~~--~~~iP 253 (778)
............-.+..++++..||+||.+.+ ..|..++|||+||+|++|++.- ...+. ...+.. -..||
T Consensus 405 s~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g------~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t~~d~r~g~ip 478 (516)
T KOG1033|consen 405 SQDKDETVAPAAASHTQQVGTLLYMSPEQIRG------QQYSEKVDIYALGLILAELLIQFSTQFERIATLTDIRDGIIP 478 (516)
T ss_pred ecccCCcccchhhhhhhcccccccCCHHHHhh------hhhhhhcchhhHHHHHHHHHHHhccHHHHHHhhhhhhcCCCC
Confidence 88765411111112345677779999999998 4788999999999999999971 11111 111111 13456
Q ss_pred cc-------hHHHHHHHhccCCCCCCChHHH
Q 004025 254 KS-------LLPDYQRLLSSMPSRRLNSSKL 277 (778)
Q Consensus 254 ~~-------L~~~i~~lL~~dP~~Rps~~~l 277 (778)
+. -..++..|+.+.|.+||++.+.
T Consensus 479 ~~~~~d~p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 479 PEFLQDYPEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred hHHhhcCcHHHHHHHHhcCCCcccCchHHHH
Confidence 32 2356889999999999955443
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.6e-14 Score=148.17 Aligned_cols=145 Identities=12% Similarity=0.009 Sum_probs=104.8
Q ss_pred CceeccCCCCCC-CceEEEEeE-ECCCCCcEEEEEEeCCCCch----------------------hHHHHHHHHHHHHhc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGT-SKDDGSPVSIFSISGTNAQD----------------------GHLAAARNGVKRLRT 75 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~-~k~~g~~VaIK~~~~~~~~~----------------------~~~~~~~~ev~~Lk~ 75 (778)
-|.|.+.+|.|+ | .||.|+ +..+|+.|+||++....... .....+++|++.++.
T Consensus 29 ~~~i~~~Lg~G~~g--~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~ 106 (237)
T smart00090 29 LSAIGGCISTGKEA--NVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQR 106 (237)
T ss_pred hHHhCCeeccCcce--eEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 389999999998 8 899999 77789999999998542110 012346789999999
Q ss_pred CCCCCeeeEeeeeEecccccCCcccEEEEEecCCc--ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCC-ccc
Q 004025 76 VRHPNILAFLHSTEVENIDATSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCK-LVH 152 (778)
Q Consensus 76 LrHPnIlk~~d~~e~e~~~g~~~~~~lyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~-ivH 152 (778)
|.+. ++.+...+... ..||||||+. +|...+..... .....+..++.||+.+|.+||. .+ ++|
T Consensus 107 L~~~-~i~~p~~~~~~---------~~~lV~E~~~g~~L~~~~~~~~~---~~~~~~~~i~~qi~~~l~~LH~-~g~iiH 172 (237)
T smart00090 107 LYEA-GVPVPKPIAWR---------RNVLVMEFIGGDGLPAPRLKDVE---PEEEEEFELYDDILEEMRKLYK-EGELVH 172 (237)
T ss_pred HHhc-CCCCCeeeEec---------CceEEEEEecCCcccccccccCC---cchHHHHHHHHHHHHHHHHHHh-cCCEEe
Confidence 9763 33333333321 2489999994 35443322111 1122234558999999999995 88 999
Q ss_pred cccCCCCeEEcCCCcEEEEecccccccCC
Q 004025 153 GNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (778)
Q Consensus 153 ~dLkp~NI~v~~~g~~KL~dFgla~~~~~ 181 (778)
|||||+||+++ ++.++|+|||.+.....
T Consensus 173 ~Dikp~NIli~-~~~i~LiDFg~a~~~~~ 200 (237)
T smart00090 173 GDLSEYNILVH-DGKVVIIDVSQSVELDH 200 (237)
T ss_pred CCCChhhEEEE-CCCEEEEEChhhhccCC
Confidence 99999999999 88999999999876543
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.45 E-value=3e-13 Score=151.96 Aligned_cols=194 Identities=17% Similarity=0.225 Sum_probs=141.2
Q ss_pred HhcCCCCCeeeEeeeeEecccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCc
Q 004025 73 LRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKL 150 (778)
Q Consensus 73 Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~i 150 (778)
|+.+.|.|+.+|++.+... ..+++|.+|| ++|.+.+........ .......++.|+.||.|||+..-.
T Consensus 1 l~~l~h~n~~~f~g~~~~~--------~~~~~i~~~c~rGsl~D~i~~~~~~~d--~~F~~s~~rdi~~Gl~ylh~s~i~ 70 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG--------PEMIVIWEYCSRGSLLDILSNEDIKLD--YFFILSFIRDISKGLAYLHNSPIG 70 (484)
T ss_pred CcccchhhhhhheeeEecC--------CceEEEEeeecCccHHhHHhccccCcc--HHHHHHHHHHHHHHHHHHhcCcce
Confidence 5788999999999999874 3899999999 789999987443211 122334489999999999975444
Q ss_pred cccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCcccccccc-ccccCCCCCcchhHHHHH
Q 004025 151 VHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDW-TAVRKSPPWSIDSWGLGC 229 (778)
Q Consensus 151 vH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~-~~~~~~~~~~~DiwSLG~ 229 (778)
.||+++..|.+++....+||.|||+......... ............|.|||++.+.- .......+.+.|+||||+
T Consensus 71 ~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~----~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~i 146 (484)
T KOG1023|consen 71 YHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAE----PEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGI 146 (484)
T ss_pred eeeeeccccceeeeeEEEEechhhhccccccccc----ccccchhHHHHhccCHHHhcccccccccccccccCCeehHHH
Confidence 9999999999999999999999999877643110 00011111223789999988631 111123567899999999
Q ss_pred HHHHHHhCCCCCChhh-----------hhc------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 230 LIYELFSGMRLSKTEE-----------LRN------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 230 liyel~tg~~p~~~~~-----------l~~------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
++||+++...+|.... ++. ...++..+..++++|+..+|..||++.++-..
T Consensus 147 i~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~ 220 (484)
T KOG1023|consen 147 IMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSK 220 (484)
T ss_pred HHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhh
Confidence 9999999887774311 011 11455568888999999999999999887544
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.2e-13 Score=162.08 Aligned_cols=200 Identities=19% Similarity=0.248 Sum_probs=138.6
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
..+|+..+.+..|. | .||..+++.+.+++++ .+++.+. .++| |+.+.+.
T Consensus 82 e~df~~IklisngAyg--avylvrh~~trqrfa~-kiNkq~l------ilRn------------ilt~a~n--------- 131 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYG--AVYLVRHKETRQRFAM-KINKQNL------ILRN------------ILTFAGN--------- 131 (1205)
T ss_pred ccccceeEeeccCCCC--ceeeeeccccccchhh-cccccch------hhhc------------cccccCC---------
Confidence 35788888888888 8 8999999999999999 5444211 1222 3333221
Q ss_pred CcccEEEEEecCCcChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 97 STKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 97 ~~~~~lyIVtE~v~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
-+.| ++-...++..+... .+++.|++|||+ .+|+|||+||+|.+|+.-|.+||.|||+.
T Consensus 132 -----pfvv----gDc~tllk~~g~lP-----------vdmvla~Eylh~-ygivhrdlkpdnllIT~mGhiKlTDfgLs 190 (1205)
T KOG0606|consen 132 -----PFVV----GDCATLLKNIGPLP-----------VDMVLAVEYLHS-YGIVHRDLKPDNLLITSMGHIKLTDFGLS 190 (1205)
T ss_pred -----ccee----chhhhhcccCCCCc-----------chhhHHhHhhcc-CCeecCCCCCCcceeeecccccccchhhh
Confidence 1222 33334444332211 123789999996 99999999999999999999999999997
Q ss_pred cccCCCCC--CCCC-------CccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh
Q 004025 177 SEFDGNNE--AANG-------PMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR 247 (778)
Q Consensus 177 ~~~~~~~~--~~~~-------~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~ 247 (778)
...-.... ...+ .+....-++++.|.|||++.- ++|...+|+|+||+++||.+-|..+|..+...
T Consensus 191 k~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilr------qgygkpvdwwamGiIlyeFLVgcvpffGdtpe 264 (1205)
T KOG0606|consen 191 KKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILR------QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE 264 (1205)
T ss_pred hhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhh------hccCCCccHHHHHHHHHHHheeeeeccCCCHH
Confidence 54321100 0000 111112245568999999865 57889999999999999999998877654211
Q ss_pred ---------------ccCCCCcchHHHHHHHhccCCCCCCCh
Q 004025 248 ---------------NTASIPKSLLPDYQRLLSSMPSRRLNS 274 (778)
Q Consensus 248 ---------------~~~~iP~~L~~~i~~lL~~dP~~Rps~ 274 (778)
....+|.+...++.+||..+|..|.-.
T Consensus 265 elfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt 306 (1205)
T KOG0606|consen 265 ELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGT 306 (1205)
T ss_pred HHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhccc
Confidence 124678889999999999999999754
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.42 E-value=8.8e-13 Score=133.79 Aligned_cols=137 Identities=12% Similarity=0.074 Sum_probs=102.6
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch--------------------hHHHHHHHHHHHHhcCCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD--------------------GHLAAARNGVKRLRTVRH 78 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~--------------------~~~~~~~~ev~~Lk~LrH 78 (778)
-|.+.+.|+.|. | .||+|..+ +|+.|+||++....... .....+.+|+..+..+.|
T Consensus 16 ~~~~~~~i~~G~~g--~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~ 92 (198)
T cd05144 16 VESLGNQIGVGKES--DVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYE 92 (198)
T ss_pred hhhcCCccccCcce--EEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHH
Confidence 388999999998 7 89999875 79999999987532110 011236788999999988
Q ss_pred CC--eeeEeeeeEecccccCCcccEEEEEecCCc--ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccc
Q 004025 79 PN--ILAFLHSTEVENIDATSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154 (778)
Q Consensus 79 Pn--Ilk~~d~~e~e~~~g~~~~~~lyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~d 154 (778)
++ +..+++. ...|+||||+. +|...... .. ....+.+|+.++.++|+ .+++|||
T Consensus 93 ~~i~v~~~~~~------------~~~~lv~e~~~g~~L~~~~~~-----~~----~~~~~~~i~~~l~~lh~-~gi~H~D 150 (198)
T cd05144 93 EGFPVPKPIDW------------NRHAVVMEYIDGVELYRVRVL-----ED----PEEVLDEILEEIVKAYK-HGIIHGD 150 (198)
T ss_pred cCCCCCceeec------------CCceEEEEEeCCcchhhcccc-----cc----HHHHHHHHHHHHHHHHH-CCCCcCC
Confidence 75 3333331 14589999993 56544321 11 22348899999999996 8999999
Q ss_pred cCCCCeEEcCCCcEEEEecccccccCC
Q 004025 155 VCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (778)
Q Consensus 155 Lkp~NI~v~~~g~~KL~dFgla~~~~~ 181 (778)
|+|+||++++++.++|+|||++.....
T Consensus 151 l~p~Nill~~~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 151 LSEFNILVDDDEKIYIIDWPQMVSTDH 177 (198)
T ss_pred CCcccEEEcCCCcEEEEECCccccCCC
Confidence 999999999999999999999976654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.5e-12 Score=132.96 Aligned_cols=133 Identities=15% Similarity=0.093 Sum_probs=102.6
Q ss_pred cCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch------hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD------GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~------~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+.||.|. | .||+|.. +|..|+||+........ .....+.+|++.++.++|++|......+...
T Consensus 2 ~~l~~G~~~--~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~------ 71 (211)
T PRK14879 2 KLIKRGAEA--EIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDP------ 71 (211)
T ss_pred cccccCceE--EEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeC------
Confidence 4678887 7 8999987 68889999876432211 1234578899999999999876655554432
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
...|+||||+ .+|.+++..... .....+.+|+.+|.+||+ .+++|||++|.||+++ ++.++|+|||+
T Consensus 72 --~~~~lv~e~~~G~~L~~~~~~~~~-------~~~~i~~~i~~~l~~lH~-~~i~H~Dl~p~Nil~~-~~~~~liDf~~ 140 (211)
T PRK14879 72 --ENFIIVMEYIEGEPLKDLINSNGM-------EELELSREIGRLVGKLHS-AGIIHGDLTTSNMILS-GGKIYLIDFGL 140 (211)
T ss_pred --CCCEEEEEEeCCcCHHHHHHhccH-------HHHHHHHHHHHHHHHHHh-CCcccCCCCcccEEEE-CCCEEEEECCc
Confidence 2578999999 378888765321 234558999999999995 9999999999999999 88999999998
Q ss_pred ccc
Q 004025 176 LSE 178 (778)
Q Consensus 176 a~~ 178 (778)
+..
T Consensus 141 a~~ 143 (211)
T PRK14879 141 AEF 143 (211)
T ss_pred ccC
Confidence 765
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.39 E-value=1e-12 Score=157.12 Aligned_cols=196 Identities=15% Similarity=0.170 Sum_probs=142.0
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchh-HHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDG-HLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~-~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
-+..|.|.+.+|.|+ | +||.|+... |+.||+|+=.-.+..+- +...++ .+||-.--|.|..+...+.-.+
T Consensus 696 ~~~~~~I~~e~G~g~y~--~vy~a~~~~-~~~~alK~e~P~~~WEfYI~~q~~---~RLk~~~~~~~~~~~~a~~~~~-- 767 (974)
T KOG1166|consen 696 GGEKFCISKEIGEGSYG--SVYVATHSN-GKLVALKVEKPPNPWEFYICLQVM---ERLKPQMLPSIMHISSAHVFQN-- 767 (974)
T ss_pred cceeEEEEeeeccccce--EEEEeecCC-CcEEEEEeecCCCceeeeehHHHH---HhhchhhhcchHHHHHHHccCC--
Confidence 345799999999998 8 999999886 99999999765554442 222222 2233111567777776665432
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC-------C
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ-------T 165 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~-------~ 165 (778)
.-++|+||. |.|.+++...+. .....+..+..|++.-+..|| .++||||||||+|.++.. .
T Consensus 768 ------~S~lv~ey~~~Gtlld~~N~~~~---m~e~lv~~~~~qml~ive~lH-~~~IIHgDiKPDNfll~~~~~~~~~~ 837 (974)
T KOG1166|consen 768 ------ASVLVSEYSPYGTLLDLINTNKV---MDEYLVMFFSCQMLRIVEHLH-AMGIIHGDIKPDNFLLRREICADSDS 837 (974)
T ss_pred ------cceeeeeccccccHHHhhccCCC---CCchhhhHHHHHHHHHHHHHH-hcceecccCCcceeEeecccCCCCcc
Confidence 458999998 899999884332 223345566999999999999 599999999999999953 2
Q ss_pred CcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCC
Q 004025 166 LDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL 240 (778)
Q Consensus 166 g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p 240 (778)
--++|+|||.+-.+.-..+. ..-.....+..+..+|+..| +..++.+|.|+|+.+||-|+.|+..
T Consensus 838 ~~l~lIDfG~siDm~lfp~~----~~F~~~~~td~f~C~EM~~g------rpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 838 KGLYLIDFGRSIDMKLFPDG----TKFKAVWHTDLFDCIEMREG------RPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred cceEEEecccceeeeEcCCC----cEEeeeeccccchhHHHhcC------CCCchhhhhHHHHHHHHHHHHHHHH
Confidence 34899999998776543211 11112234458899999888 5788999999999999999998743
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.3e-12 Score=130.35 Aligned_cols=129 Identities=19% Similarity=0.130 Sum_probs=96.5
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch------hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcc
Q 004025 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD------GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (778)
Q Consensus 27 lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~------~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~ 99 (778)
||.|. | +||+|.. +|..|+||.+....... ...+.+.+|++.++.++|+++....-.+..+
T Consensus 2 ig~G~~~--~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~-------- 69 (199)
T TIGR03724 2 IAKGAEA--IIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDP-------- 69 (199)
T ss_pred CCCCceE--EEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC--------
Confidence 56776 6 9999984 67899999976532211 1235678999999999988644332222222
Q ss_pred cEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 100 ~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
...|+||||+ ++|.+.+..... ..+.|++.+|.+||+ .+++|||++|.||+++ ++.++|.|||++.
T Consensus 70 ~~~~lv~e~~~g~~l~~~~~~~~~----------~~~~~i~~~l~~lH~-~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~ 137 (199)
T TIGR03724 70 DNKTIVMEYIEGKPLKDVIEEGND----------ELLREIGRLVGKLHK-AGIVHGDLTTSNIIVR-DDKLYLIDFGLGK 137 (199)
T ss_pred CCCEEEEEEECCccHHHHHhhcHH----------HHHHHHHHHHHHHHH-CCeecCCCCcceEEEE-CCcEEEEECCCCc
Confidence 2568999999 468777654221 338999999999995 9999999999999999 8999999999876
Q ss_pred cc
Q 004025 178 EF 179 (778)
Q Consensus 178 ~~ 179 (778)
..
T Consensus 138 ~~ 139 (199)
T TIGR03724 138 YS 139 (199)
T ss_pred CC
Confidence 53
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.33 E-value=7.4e-12 Score=146.26 Aligned_cols=136 Identities=15% Similarity=0.070 Sum_probs=102.0
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc------hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ------DGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~------~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~ 92 (778)
.|...+.||.|. | +||+|... +..+++|+...+... ....+.+.+|++.++.++|++|+..+.....+
T Consensus 334 ~~~~~~~iG~G~~g--~Vy~~~~~--~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~- 408 (535)
T PRK09605 334 RKIPDHLIGKGAEA--DIKKGEYL--GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDP- 408 (535)
T ss_pred ccCccceeccCCcE--EEEEEeec--CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeC-
Confidence 345567789988 7 89999874 444555544322111 12345688999999999999988766555442
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEE
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
...|+||||+ ++|.+++.. ....+.||+.+|.+||+ .+++||||||+||++ .++.++|
T Consensus 409 -------~~~~lv~E~~~g~~L~~~l~~-----------~~~~~~~i~~~L~~lH~-~giiHrDlkp~NILl-~~~~~~l 468 (535)
T PRK09605 409 -------EEKTIVMEYIGGKDLKDVLEG-----------NPELVRKVGEIVAKLHK-AGIVHGDLTTSNFIV-RDDRLYL 468 (535)
T ss_pred -------CCCEEEEEecCCCcHHHHHHH-----------HHHHHHHHHHHHHHHHh-CCCccCCCChHHEEE-ECCcEEE
Confidence 2568999999 478887752 12348899999999995 999999999999999 6789999
Q ss_pred EecccccccC
Q 004025 171 HAFDVLSEFD 180 (778)
Q Consensus 171 ~dFgla~~~~ 180 (778)
+|||+++...
T Consensus 469 iDFGla~~~~ 478 (535)
T PRK09605 469 IDFGLGKYSD 478 (535)
T ss_pred EeCcccccCC
Confidence 9999987643
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.31 E-value=8.9e-12 Score=124.73 Aligned_cols=138 Identities=17% Similarity=0.182 Sum_probs=94.6
Q ss_pred eccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhH-H---------------------HHHHHHHHHHhcCCCC
Q 004025 23 IGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGH-L---------------------AAARNGVKRLRTVRHP 79 (778)
Q Consensus 23 i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~-~---------------------~~~~~ev~~Lk~LrHP 79 (778)
+++.||.|+ | +||.|++. +|+.|+||++......... . .....|.+.+..+++.
T Consensus 1 ~~~~lg~G~~g--~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~ 77 (187)
T cd05119 1 VGGPIGTGKEA--DVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEA 77 (187)
T ss_pred CCcccccccce--eEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHc
Confidence 356788888 8 89999987 8999999998754221111 1 1124566667776544
Q ss_pred C--eeeEeeeeEecccccCCcccEEEEEecCCcC--h-HHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccc
Q 004025 80 N--ILAFLHSTEVENIDATSTKITIYIVTEPVMP--L-SEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154 (778)
Q Consensus 80 n--Ilk~~d~~e~e~~~g~~~~~~lyIVtE~v~~--L-~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~d 154 (778)
+ +.+++... ..++||||+.. + ...+...... .....++.|++.++.++|...+++|+|
T Consensus 78 ~~~~~~~~~~~------------~~~lv~e~~~g~~~~~~~l~~~~~~-----~~~~~~~~~~~~~l~~lh~~~~ivH~D 140 (187)
T cd05119 78 GVPVPKPIDLN------------RHVLVMEFIGGDGIPAPRLKDVRLL-----EDPEELYDQILELMRKLYREAGLVHGD 140 (187)
T ss_pred CCCCCceEecC------------CCEEEEEEeCCCCccChhhhhhhhc-----ccHHHHHHHHHHHHHHHhhccCcCcCC
Confidence 3 33444321 35899999932 1 1222222111 223445899999999999548999999
Q ss_pred cCCCCeEEcCCCcEEEEecccccccCC
Q 004025 155 VCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (778)
Q Consensus 155 Lkp~NI~v~~~g~~KL~dFgla~~~~~ 181 (778)
|+|+||+++ ++.++|+|||.+.....
T Consensus 141 l~p~Nili~-~~~~~liDfg~a~~~~~ 166 (187)
T cd05119 141 LSEYNILVD-DGKVYIIDVPQAVEIDH 166 (187)
T ss_pred CChhhEEEE-CCcEEEEECcccccccC
Confidence 999999999 89999999999987654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.29 E-value=2e-11 Score=127.71 Aligned_cols=130 Identities=12% Similarity=0.070 Sum_probs=94.1
Q ss_pred EEEEeEECCCCCcEEEEEEeCCCC-----c------hhHHHHHHHHHHHHhcCCCCCe--eeEeeeeEecccccCCcccE
Q 004025 35 SHFQGTSKDDGSPVSIFSISGTNA-----Q------DGHLAAARNGVKRLRTVRHPNI--LAFLHSTEVENIDATSTKIT 101 (778)
Q Consensus 35 ~Vy~g~~k~~g~~VaIK~~~~~~~-----~------~~~~~~~~~ev~~Lk~LrHPnI--lk~~d~~e~e~~~g~~~~~~ 101 (778)
++|.+.. .+..++||.+..... . ......+.+|++.++.|+|++| .+.+...+.+... ...
T Consensus 47 tv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~----~~~ 120 (239)
T PRK01723 47 TTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHGL----FYR 120 (239)
T ss_pred cEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecCc----cee
Confidence 6666655 378899999864221 1 1223567899999999999885 6666665443210 123
Q ss_pred EEEEecCCc---ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccc
Q 004025 102 IYIVTEPVM---PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (778)
Q Consensus 102 lyIVtE~v~---~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~ 178 (778)
.+||||++. +|.+++..... ... . +.||+.+|.+||. ++|+|+||||.||+++.++.++|+|||.++.
T Consensus 121 ~~lV~e~l~G~~~L~~~l~~~~l----~~~-~---~~~i~~~l~~lH~-~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~ 191 (239)
T PRK01723 121 ADILIERIEGARDLVALLQEAPL----SEE-Q---WQAIGQLIARFHD-AGVYHADLNAHNILLDPDGKFWLIDFDRGEL 191 (239)
T ss_pred eeEEEEecCCCCCHHHHHhcCCC----CHH-H---HHHHHHHHHHHHH-CCCCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence 469999993 58877765321 122 2 6799999999995 9999999999999999999999999998765
Q ss_pred c
Q 004025 179 F 179 (778)
Q Consensus 179 ~ 179 (778)
.
T Consensus 192 ~ 192 (239)
T PRK01723 192 R 192 (239)
T ss_pred C
Confidence 3
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.7e-11 Score=138.17 Aligned_cols=243 Identities=18% Similarity=0.121 Sum_probs=171.3
Q ss_pred CCceeccCCCC--CCCceEEEEeEE--CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEeccc
Q 004025 19 LPYNIGDPYPS--AWGSWSHFQGTS--KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENI 93 (778)
Q Consensus 19 ~~Y~i~~~lg~--g~g~w~Vy~g~~--k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~ 93 (778)
..+.+...+|. |. -|.+|.++. +.++..+++|.=+...........=.+|+...++++ |+|.++.+..++..
T Consensus 114 ~~~~~~~~~g~~~g~-~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~-- 190 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGS-KGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGS-- 190 (524)
T ss_pred hhcccccccccCCCC-CceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccC--
Confidence 34556667777 54 238999999 899999999985433222111222345666677776 99999988888863
Q ss_pred ccCCcccEEEEEecCCc-ChHHHHHHhCcCCCcchHHHHHHHHHHHH----HHHHHHcCCCccccccCCCCeEEcCC-Cc
Q 004025 94 DATSTKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAK----AVSFLNNDCKLVHGNVCLSSVVVTQT-LD 167 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~----aL~fLH~~~~ivH~dLkp~NI~v~~~-g~ 167 (778)
..+||-||+|+ .|..+....... .....++-.+.+... ||..+|+ ++++|.|++|.||+...+ ..
T Consensus 191 ------~~lfiqtE~~~~sl~~~~~~~~~~--~p~~~l~~~~~~~~~~~~~al~~~hs-~~~~~~~~kp~~i~~~~~~~s 261 (524)
T KOG0601|consen 191 ------GILFIQTELCGESLQSYCHTPCNF--LPDNLLWNSLRDWLSRDVTALSHLHS-NNIVHDDLKPANIFTTSDWTS 261 (524)
T ss_pred ------CcceeeeccccchhHHhhhccccc--CCchhhhhHHhhhhhcccccccccCC-Ccccccccchhheecccccce
Confidence 48999999996 476666554321 112223334677777 9999996 999999999999999998 89
Q ss_pred EEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCCh----
Q 004025 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT---- 243 (778)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~---- 243 (778)
.+++||+++..+.+.+....... .+...++..|++||+.++ .+..+.|+|+||.++.+...+..+...
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~-~~r~~~~~~Y~~ke~~~~-------l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~ 333 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKV-SKRPEGDCIYAAKELLNG-------LATFASDIFSLGEVILEAILGSHLPSVGKNS 333 (524)
T ss_pred eecCCcceeEEccCCccccceee-eecCCCCceEeChhhhcc-------ccchHhhhcchhhhhHhhHhhcccccCCCCC
Confidence 99999999999877542221111 122245568999999886 466789999999999999887544321
Q ss_pred --hhhhccC-------CCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 244 --EELRNTA-------SIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 244 --~~l~~~~-------~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.++++.+ .....+...+..|+..++..|++.+.+..+.
T Consensus 334 ~W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~ 380 (524)
T KOG0601|consen 334 SWSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALN 380 (524)
T ss_pred CccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccc
Confidence 1223222 2233455567889999999999998888775
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.1e-10 Score=110.79 Aligned_cols=130 Identities=15% Similarity=0.061 Sum_probs=98.4
Q ss_pred eccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCC--CCeeeEeeeeEecccccCCcc
Q 004025 23 IGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRH--PNILAFLHSTEVENIDATSTK 99 (778)
Q Consensus 23 i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrH--PnIlk~~d~~e~e~~~g~~~~ 99 (778)
+.+.++.|. + .||+++.. +..++||.+..... ...+.+|+..++.|+| +++.+++...+..
T Consensus 2 ~~~~i~~g~~~--~v~~~~~~--~~~~~iK~~~~~~~----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~-------- 65 (155)
T cd05120 2 SIKLLKGGLTN--RVYLLGTK--DEDYVLKINPSREK----GADREREVAILQLLARKGLPVPKVLASGESD-------- 65 (155)
T ss_pred cceeccccccc--ceEEEEec--CCeEEEEecCCCCc----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCC--------
Confidence 345677776 6 89999975 37899999865432 3457889999999976 5888888877653
Q ss_pred cEEEEEecCCc--ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcC--CCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 100 ITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNND--CKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 100 ~~lyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~--~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
...|+++||+. ++..+ ........+.+++.+|.+||.- .+++|||++|+||+++..+.++|.|||.
T Consensus 66 ~~~~~v~e~~~g~~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~ 135 (155)
T cd05120 66 GWSYLLMEWIEGETLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEY 135 (155)
T ss_pred CccEEEEEecCCeecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEeccc
Confidence 37899999983 34322 1112233488999999999952 2699999999999999999999999998
Q ss_pred ccc
Q 004025 176 LSE 178 (778)
Q Consensus 176 a~~ 178 (778)
+..
T Consensus 136 ~~~ 138 (155)
T cd05120 136 AGY 138 (155)
T ss_pred ccC
Confidence 764
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.14 E-value=7.9e-12 Score=146.47 Aligned_cols=246 Identities=15% Similarity=0.166 Sum_probs=172.9
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEEC-CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEeccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSK-DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENI 93 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k-~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~ 93 (778)
+..+|.+.+.+|.|. + .+-..... .....++++.+..........+.+..|..+-+.+. |+|++.+++....
T Consensus 18 ~~~~~~~~~~ig~gs~~--~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~--- 92 (601)
T KOG0590|consen 18 PNSQYKLSRSIGKGSFS--SSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSS--- 92 (601)
T ss_pred ccccccccccccccccc--hhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCC---
Confidence 367899999999887 5 44444432 23445666655544323344556677887777887 9999999998876
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC-cEEE
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-DWKL 170 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g-~~KL 170 (778)
+...++++||. +.+...+........ ........+.|+..+|.|+|..+++.|+||+|+|.+++.+| ..|+
T Consensus 93 -----~~~~~~~~~~s~g~~~f~~i~~~~~~~~-~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~ 166 (601)
T KOG0590|consen 93 -----PRSYLLSLSYSDGGSLFSKISHPDSTGT-SSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKI 166 (601)
T ss_pred -----CcccccccCcccccccccccccCCccCC-CCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccC
Confidence 45889999997 346655521111011 11112334999999999999438999999999999999999 9999
Q ss_pred EecccccccCCCCCCCCCCcccccccc-CCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh---
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLV-GAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--- 246 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~-~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l--- 246 (778)
.|||+++.+...+.. ........+ ...|++||...+. .......|+||.|+++..++.|..+......
T Consensus 167 ~df~~At~~~~~~g~---~~~~~~~~g~s~~y~a~E~~~~~-----~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~ 238 (601)
T KOG0590|consen 167 ADFGLATAYRNKNGA---ERSLKDRCGSSPPYGAPEHLSGK-----AYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDG 238 (601)
T ss_pred CCchhhccccccCCc---ceeeecccCCCCCCCCcccccch-----hhcCCCcccccccccccccccCCCCccccccccc
Confidence 999999988662111 111222344 5689999998762 2345689999999999999999866532111
Q ss_pred --------------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 --------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 --------------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....+.......+.+++..+|..|.+..++-.++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~ 287 (601)
T KOG0590|consen 239 RYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDN 287 (601)
T ss_pred cceeecccccccccCccccCChhhhhcccccccCCchhccccccccccc
Confidence 11234566677778889999999999999988877
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.99 E-value=6.9e-11 Score=123.57 Aligned_cols=201 Identities=16% Similarity=0.184 Sum_probs=131.1
Q ss_pred HHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEEEEecCC--cChHHHHHHhCcCCC-cchHHHHHHHHHHHHHHH
Q 004025 66 ARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGS-QRDEYYAWGLNQIAKAVS 142 (778)
Q Consensus 66 ~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~-~~~~~i~~gl~QI~~aL~ 142 (778)
.+.-+..|-++-|-||++++.++.+.... ....+.++|||+ ++|..+|++...... ......+.++-||+.||.
T Consensus 114 ~~~vFdnllqlvHsnlvkfH~yw~d~K~~---e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~ 190 (458)
T KOG1266|consen 114 RRAVFDNLLQLVHSNLVKFHKYWTDKKYE---EKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALS 190 (458)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccccc---cccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhh
Confidence 34445677788899999999988754321 145788999999 679999987543222 112223445999999999
Q ss_pred HHHcCC--CccccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccc---cccCCCCCCccccccccccccCC
Q 004025 143 FLNNDC--KLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYA---WLVGAQYKPVELAKSDWTAVRKS 217 (778)
Q Consensus 143 fLH~~~--~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~---~~~~~~Y~aPE~~~~~~~~~~~~ 217 (778)
|||+ | .++|+|+..+.||+..+|-+|++--.........+ ...... ...-+.|.+||.-.- ..
T Consensus 191 yLhs-~~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~-----~~~~~Ek~~~~~~~g~~a~~sg~~------tn 258 (458)
T KOG1266|consen 191 YLHS-CDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVN-----STREAEKSVNTSLPGFSAPESGTT------TN 258 (458)
T ss_pred hhhc-cCCccccCCcchhheeecCCceEEecccCccccchhhh-----hhhHhhhhccccCCccccCCcCcc------cc
Confidence 9997 5 69999999999999999999986322211110000 000000 111236788887443 24
Q ss_pred CCCcchhHHHHHHHHHHHhCCCC-CChh-------hhhc-cCCCCcch-HHHHHHHhccCCCCCCChHHHHhcc
Q 004025 218 PPWSIDSWGLGCLIYELFSGMRL-SKTE-------ELRN-TASIPKSL-LPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 218 ~~~~~DiwSLG~liyel~tg~~p-~~~~-------~l~~-~~~iP~~L-~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.+.++|||+||+...||--+..- .+.+ ...+ +..+...+ +..+.+|++..|..||++..++-|+
T Consensus 259 ~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~len~lqr~~i~kcl~~eP~~rp~ar~llfHp 332 (458)
T KOG1266|consen 259 TTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIGLENGLQRGSITKCLEGEPNGRPDARLLLFHP 332 (458)
T ss_pred cccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheeeccCccccCcCcccccCCCCCCcchhhhhcCc
Confidence 55689999999888888776432 1111 0000 11122222 3457889999999999999999998
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=98.97 E-value=3.1e-09 Score=107.31 Aligned_cols=138 Identities=12% Similarity=0.071 Sum_probs=93.4
Q ss_pred ccCCCCCC-CceEEEEeEECC------CCCcEEEEEEeCCCC-----------c---------hhHHHH----HHHHHHH
Q 004025 24 GDPYPSAW-GSWSHFQGTSKD------DGSPVSIFSISGTNA-----------Q---------DGHLAA----ARNGVKR 72 (778)
Q Consensus 24 ~~~lg~g~-g~w~Vy~g~~k~------~g~~VaIK~~~~~~~-----------~---------~~~~~~----~~~ev~~ 72 (778)
...|+.|- + .||.|.... .+..||||++..... . ...... +++|++.
T Consensus 2 ~g~i~~GKEa--~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~ 79 (197)
T cd05146 2 NGCISTGKES--VVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHN 79 (197)
T ss_pred CCccccCcce--EEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHH
Confidence 34667776 6 899998653 357999999973210 0 011223 4599999
Q ss_pred HhcCCC--CCeeeEeeeeEecccccCCcccEEEEEecCCcC--h-HHHHHHhCcCCCcchHHHHHHHHHHHHHHHHH-Hc
Q 004025 73 LRTVRH--PNILAFLHSTEVENIDATSTKITIYIVTEPVMP--L-SEKIKELGLEGSQRDEYYAWGLNQIAKAVSFL-NN 146 (778)
Q Consensus 73 Lk~LrH--PnIlk~~d~~e~e~~~g~~~~~~lyIVtE~v~~--L-~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fL-H~ 146 (778)
|++|+. -++.+.++.. .-+|||||++. + ...++..... .+.+...+.|++.+|..| |
T Consensus 80 L~rl~~~Gv~vP~pi~~~------------~~~lvME~Ig~~~~~~~~Lkd~~~~----~~~~~~i~~~i~~~l~~l~H- 142 (197)
T cd05146 80 LKRMQKAGIPCPEVVVLK------------KHVLVMSFIGDDQVPAPKLKDAKLN----DEEMKNAYYQVLSMMKQLYK- 142 (197)
T ss_pred HHHHHHcCCCCCeEEEec------------CCEEEEEEcCCCCccchhhhccccC----HHHHHHHHHHHHHHHHHHHH-
Confidence 999863 3455666542 24899999953 2 1223332211 122334478999999998 7
Q ss_pred CCCccccccCCCCeEEcCCCcEEEEecccccccCC
Q 004025 147 DCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (778)
Q Consensus 147 ~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~ 181 (778)
++++|||||++.||++. +|.+.|+|||.+.....
T Consensus 143 ~~glVHGDLs~~NIL~~-~~~v~iIDF~qav~~~h 176 (197)
T cd05146 143 ECNLVHADLSEYNMLWH-DGKVWFIDVSQSVEPTH 176 (197)
T ss_pred hCCeecCCCCHHHEEEE-CCcEEEEECCCceeCCC
Confidence 59999999999999996 57899999998877653
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.5e-09 Score=123.38 Aligned_cols=143 Identities=13% Similarity=0.162 Sum_probs=90.6
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc----------------------------h----hHHHH--
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ----------------------------D----GHLAA-- 65 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~----------------------------~----~~~~~-- 65 (778)
|+. +.+++|+ | .||.|+.+++|+.|+||+....-.. . +..+.
T Consensus 122 fd~-~PlasaSia--QVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 122 FDI-KPLASASIA--QVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred cCh-hhhcCCCcc--EEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 555 6788888 8 9999999988999999999743100 0 11111
Q ss_pred ----HHHHHHHHhcCC----CCCeeeEeeeeEecccccCCcccEEEEEecCC--cChHHH--HHHhCcCCC-cchHHHHH
Q 004025 66 ----ARNGVKRLRTVR----HPNILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEK--IKELGLEGS-QRDEYYAW 132 (778)
Q Consensus 66 ----~~~ev~~Lk~Lr----HPnIlk~~d~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~--L~~~~~~~~-~~~~~i~~ 132 (778)
+.+|...+.+++ +.+.+.+-+++.+-. +..+|||||| .+|.++ +...+.... .....+..
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~s-------t~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~ 271 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYC-------SETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEV 271 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccC-------CCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHH
Confidence 233444444443 555555555554321 2568999999 467653 333221110 11112333
Q ss_pred HHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC----cEEEEecccccccCC
Q 004025 133 GLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL----DWKLHAFDVLSEFDG 181 (778)
Q Consensus 133 gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g----~~KL~dFgla~~~~~ 181 (778)
++.||+. .|++|+|++|.||+|+.+| .+++.|||++..+..
T Consensus 272 ~~~Qif~--------~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 272 FFTQVFR--------DGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HHHHHHh--------CCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 3445442 6899999999999999988 999999999887743
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.1e-08 Score=116.24 Aligned_cols=141 Identities=11% Similarity=0.084 Sum_probs=89.9
Q ss_pred ccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch--h------------------------------HHH------
Q 004025 24 GDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD--G------------------------------HLA------ 64 (778)
Q Consensus 24 ~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~--~------------------------------~~~------ 64 (778)
.+.++.|+ | .||+|+.+ +|+.|+||+........ . ...
T Consensus 122 ~~plasaSig--QVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El 198 (437)
T TIGR01982 122 EKPLAAASIA--QVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRREL 198 (437)
T ss_pred Ccceeeeehh--heEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHH
Confidence 35688887 8 99999976 79999999986431110 0 000
Q ss_pred HHHHHHHHHhcC----CCCCeeeEeeeeEecccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHH
Q 004025 65 AARNGVKRLRTV----RHPNILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIA 138 (778)
Q Consensus 65 ~~~~ev~~Lk~L----rHPnIlk~~d~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~ 138 (778)
.+.+|.+.+.++ +|.+-+.+-..+.... ..-+|||||+ .+|.+........ ..... + ..+++
T Consensus 199 df~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~-------~~~vLvmE~i~G~~L~~~~~~~~~~-~~~~~-i---a~~~~ 266 (437)
T TIGR01982 199 DLRREAANASELGENFKNDPGVYVPEVYWDRT-------SERVLTMEWIDGIPLSDIAALDEAG-LDRKA-L---AENLA 266 (437)
T ss_pred CHHHHHHHHHHHHHhcCCCCCEEeCCEehhhc-------CCceEEEEeECCcccccHHHHHhcC-CCHHH-H---HHHHH
Confidence 133444444444 3444445444443221 2469999999 3677665432111 11111 2 34444
Q ss_pred H-HHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccC
Q 004025 139 K-AVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (778)
Q Consensus 139 ~-aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~ 180 (778)
. .+..+|. .+++|+|++|.||+++.+|.++|+|||++..+.
T Consensus 267 ~~~l~ql~~-~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 267 RSFLNQVLR-DGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred HHHHHHHHh-CCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 4 4677885 899999999999999999999999999987764
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.4e-08 Score=99.61 Aligned_cols=123 Identities=13% Similarity=0.105 Sum_probs=85.0
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCe-eeEeeeeEecccccCCcccEEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNI-LAFLHSTEVENIDATSTKITIY 103 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnI-lk~~d~~e~e~~~g~~~~~~ly 103 (778)
.++.|. + .||.++.. +..|+||+....... .....+|++.++.+.+.++ .+++..... .-+
T Consensus 5 ~l~~G~~~--~vy~~~~~--~~~~~lK~~~~~~~~---~~~~~~E~~~l~~l~~~~~~P~~~~~~~~----------~~~ 67 (170)
T cd05151 5 PLKGGMTN--KNYRVEVA--NKKYVVRIPGNGTEL---LINRENEAENSKLAAEAGIGPKLYYFDPE----------TGV 67 (170)
T ss_pred ecCCcccC--ceEEEEEC--CeEEEEEeCCCCccc---ccCHHHHHHHHHHHHHhCCCCceEEEeCC----------CCe
Confidence 455555 5 78988864 788999997643211 1235688888988865554 344443321 247
Q ss_pred EEecCCc--ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCC-----ccccccCCCCeEEcCCCcEEEEecccc
Q 004025 104 IVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCK-----LVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 104 IVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~-----ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
+|||++. ++... . ..... .+.+++++|..||. .+ ++|||++|.||+++ ++.++|+|||.+
T Consensus 68 lv~e~i~G~~l~~~----~---~~~~~----~~~~l~~~l~~LH~-~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a 134 (170)
T cd05151 68 LITEFIEGSELLTE----D---FSDPE----NLEKIAKLLKKLHS-SPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYA 134 (170)
T ss_pred EEEEecCCCccccc----c---ccCHH----HHHHHHHHHHHHhC-CCCCCceeecCCCCcCcEEEE-CCeEEEEecccc
Confidence 9999994 34321 0 01112 27899999999996 66 49999999999999 678999999987
Q ss_pred cc
Q 004025 177 SE 178 (778)
Q Consensus 177 ~~ 178 (778)
..
T Consensus 135 ~~ 136 (170)
T cd05151 135 GM 136 (170)
T ss_pred cC
Confidence 64
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.77 E-value=4.7e-09 Score=118.59 Aligned_cols=239 Identities=16% Similarity=0.081 Sum_probs=155.7
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEEC-CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEeccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSK-DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENI 93 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k-~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~ 93 (778)
+.-+|.....++.+. + .+++...+ .++..|++|.................|+-..-.|. |.+++.++..+...
T Consensus 263 ~~~df~~v~~i~~~~~~--~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~-- 338 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFS--SVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQL-- 338 (524)
T ss_pred ecCCcceeEEccCCccc--cceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccc--
Confidence 344677777888776 5 56666655 67888988887654333322223345555555554 88888888888753
Q ss_pred ccCCcccEEEEEecCCcChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC-CcEEEEe
Q 004025 94 DATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT-LDWKLHA 172 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~-g~~KL~d 172 (778)
...||--|||.+...-+...-.. ...+..+.....|++.++.|+|+ ..++|+|++|+||++..+ +.-+++|
T Consensus 339 ------r~~~ip~e~~~~~s~~l~~~~~~-~~d~~~~~~~~~q~~~~l~~i~s-~~~~~~d~~psni~i~~~~~~~~~~~ 410 (524)
T KOG0601|consen 339 ------RQGYIPLEFCEGGSSSLRSVTSQ-MLDEDPRLRLTAQILTALNVIHS-KLFVHLDVKPSNILISNDGFFSKLGD 410 (524)
T ss_pred ------ccccCchhhhcCcchhhhhHHHH-hcCcchhhhhHHHHHhccccccc-hhhhcccccccceeeccchhhhhccc
Confidence 36789999994322111111110 11122234458999999999995 899999999999999886 7889999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCC-ccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCCh-hhhhc--
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKP-VELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT-EELRN-- 248 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~a-PE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~-~~l~~-- 248 (778)
|++.+.+.-. ........+|+| .|.+... ..+..+.|+|+||.-+++..++.++... .+...
T Consensus 411 ~~~~t~~~~~---------~~~~~~~~r~~p~~~~~~e~-----~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~~~i~ 476 (524)
T KOG0601|consen 411 FGCWTRLAFS---------SGVFHHIDRLYPIAEILLED-----YPHLSKADIFSLGLSVDEAITGSPLSESGVQSLTIR 476 (524)
T ss_pred ccccccccee---------cccccccccccccchhhccc-----cccccccccccccccccccccCcccCcccccceeee
Confidence 9988754321 111122335553 5554443 4566789999999999999998765432 22111
Q ss_pred ---cCCCC---cchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ---TASIP---KSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ---~~~iP---~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+..+| ..+..+.+.++..++..|+.+.++..+.
T Consensus 477 ~~~~p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~ 515 (524)
T KOG0601|consen 477 SGDTPNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHS 515 (524)
T ss_pred cccccCCCchHHhhhhhhhhhcCCccccchhhhhhcccc
Confidence 12223 3455667788889999999988887765
|
|
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.75 E-value=9e-08 Score=106.19 Aligned_cols=210 Identities=16% Similarity=0.180 Sum_probs=146.2
Q ss_pred EEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEEEEecCC---cC
Q 004025 35 SHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPV---MP 111 (778)
Q Consensus 35 ~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~lyIVtE~v---~~ 111 (778)
+.|++..+.||..|++|.+....... ......-++..|++.|+|||++.++|.+...+ ...+++|++|. ..
T Consensus 291 Ttyk~~s~~DG~~YvLkRlhg~r~~~--~nk~t~lve~wkkl~h~NvV~frevf~t~tF~----D~SlvlvYDYyP~s~T 364 (655)
T KOG3741|consen 291 TTYKATSNVDGNAYVLKRLHGDRDQS--TNKDTSLVEAWKKLCHTNVVPFREVFLTYTFG----DLSLVLVYDYYPSSPT 364 (655)
T ss_pred eeEeeeeccCCceeeeeeeccccccC--cccchHHHHHHHHhccCceeehhhhhhhhccC----cceEEEEEecCCCCch
Confidence 58999999999999999995322111 11122347889999999999999999865543 56899999998 35
Q ss_pred hHHHHHH-hCc----------CCCc-chHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccccc
Q 004025 112 LSEKIKE-LGL----------EGSQ-RDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (778)
Q Consensus 112 L~~~L~~-~~~----------~~~~-~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~ 179 (778)
|.++.-. ... .+.. .+++++-++.||..||.++|+ .|+.-+-|.+.+|+|+.+-.++|.+.|+...+
T Consensus 365 L~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHs-sGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl 443 (655)
T KOG3741|consen 365 LYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHS-SGLACKTLDLKKILVTGKMRIRISGCGIMDVL 443 (655)
T ss_pred HHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHh-cCceeecccHhHeEeeCcceEEEecccceeee
Confidence 6654322 111 1112 234555669999999999996 89999999999999999989999998887666
Q ss_pred CCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCC-----C-Chhhhhcc-CCC
Q 004025 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL-----S-KTEELRNT-ASI 252 (778)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p-----~-~~~~l~~~-~~i 252 (778)
..+. . |.+.+ ..+-|.=.||.||..|.+|..- . ....++.+ ...
T Consensus 444 ~~d~---~-----------------~~le~---------~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~I~~~y 494 (655)
T KOG3741|consen 444 QEDP---T-----------------EPLES---------QQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTRITTTY 494 (655)
T ss_pred cCCC---C-----------------cchhH---------HhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHhhhhh
Confidence 5431 0 11111 1356889999999999998421 1 11112222 345
Q ss_pred CcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 253 PKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 253 P~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+++.+.-+.+.++.. -++.+++.+-
T Consensus 495 S~D~rn~v~yl~s~~~~~-ksI~~llp~~ 522 (655)
T KOG3741|consen 495 STDLRNVVEYLESLNFRE-KSIQDLLPMI 522 (655)
T ss_pred hHHHHHHHHHHHhcCccc-ccHHHHHHHH
Confidence 566777777777777765 6778888764
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.60 E-value=3.3e-07 Score=92.20 Aligned_cols=127 Identities=15% Similarity=0.163 Sum_probs=79.9
Q ss_pred EEEEeEECCCCCcEEEEEEeCCCC------------------------chhHHHHHHHHHHHHhcCCCC--CeeeEeeee
Q 004025 35 SHFQGTSKDDGSPVSIFSISGTNA------------------------QDGHLAAARNGVKRLRTVRHP--NILAFLHST 88 (778)
Q Consensus 35 ~Vy~g~~k~~g~~VaIK~~~~~~~------------------------~~~~~~~~~~ev~~Lk~LrHP--nIlk~~d~~ 88 (778)
.||.|... +|..|+||++..... .......+++|++.|+++..- ++.+.++..
T Consensus 1 ~Vy~~~~~-~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAIDP-DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEEC-TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEECC-CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 48889874 678999999974210 012345678999999999865 356666443
Q ss_pred EecccccCCcccEEEEEecCCc--C--hHHHHHHhCcCCCcchHHHHHHHHHHHHHHHH-HHcCCCccccccCCCCeEEc
Q 004025 89 EVENIDATSTKITIYIVTEPVM--P--LSEKIKELGLEGSQRDEYYAWGLNQIAKAVSF-LNNDCKLVHGNVCLSSVVVT 163 (778)
Q Consensus 89 e~e~~~g~~~~~~lyIVtE~v~--~--L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~f-LH~~~~ivH~dLkp~NI~v~ 163 (778)
+ -+|||||++ . +.. |......... ....+.+++..+.. +| .++++||||++.||+++
T Consensus 80 ~------------~~ivME~I~~~G~~~~~-l~~~~~~~~~----~~~~~~~il~~~~~~~~-~~givHGDLs~~NIlv~ 141 (188)
T PF01163_consen 80 R------------NVIVMEYIGEDGVPLPR-LKDVDLSPEE----PKELLEEILEEIIKMLH-KAGIVHGDLSEYNILVD 141 (188)
T ss_dssp T------------TEEEEE--EETTEEGGC-HHHCGGGGST----HHHHHHHHHHHHHHHHH-CTTEEESS-STTSEEEE
T ss_pred C------------CEEEEEecCCCccchhh-HHhccccchh----HHHHHHHHHHHHHHHHH-hcCceecCCChhhEEee
Confidence 2 279999996 2 433 3332211111 22337788885555 56 59999999999999998
Q ss_pred CCCcEEEEecccccccCC
Q 004025 164 QTLDWKLHAFDVLSEFDG 181 (778)
Q Consensus 164 ~~g~~KL~dFgla~~~~~ 181 (778)
++ .+.++|||.+.....
T Consensus 142 ~~-~~~iIDf~qav~~~~ 158 (188)
T PF01163_consen 142 DG-KVYIIDFGQAVDSSH 158 (188)
T ss_dssp TT-CEEE--GTTEEETTS
T ss_pred cc-eEEEEecCcceecCC
Confidence 87 899999998876653
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.59 E-value=2.4e-08 Score=118.41 Aligned_cols=241 Identities=17% Similarity=0.189 Sum_probs=158.5
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+.+.+.+.++. + .++.++...+|....+++..+... .....+.++.+-.++-..+||-++.....+..
T Consensus 806 ~~i~~p~qS~sp~--ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~-------- 875 (1205)
T KOG0606|consen 806 FEITKPSQSGSPS--SSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPC-------- 875 (1205)
T ss_pred ceecccccCCCCc--ccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCC--------
Confidence 45555555555 5 677777777776666665443211 01122333333333444456777766665332
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..-.|++++|+ ++|...|...+.... +...-++..+..++++||+ ..+.|+|++|.|+++..+|..++.+|+..
T Consensus 876 rsP~~L~~~~~~~~~~~Skl~~~~~~sa---epaRs~i~~~vqs~e~L~s-~~r~h~~~~p~~~l~~~~gh~~l~~~~t~ 951 (1205)
T KOG0606|consen 876 RSPLPLVGHYLNGGDLPSKLHNSGCLSA---EPARSPILERVQSLESLHS-SLRKHRDLKPDSLLIAYDGHRPLTDFGTL 951 (1205)
T ss_pred CCCcchhhHHhccCCchhhhhcCCCccc---ccccchhHHHHhhhhcccc-chhhcccccccchhhcccCCcccCccccc
Confidence 23689999999 678888877653222 2223337889999999996 66899999999999999999999999854
Q ss_pred cccCCCCC-------CCCC------------------CccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHH
Q 004025 177 SEFDGNNE-------AANG------------------PMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLI 231 (778)
Q Consensus 177 ~~~~~~~~-------~~~~------------------~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~li 231 (778)
........ ...+ ....+...+++.|.+||...+ ......+|+|++|+.+
T Consensus 952 ~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg------~~hgs~ad~~~~g~~l 1025 (1205)
T KOG0606|consen 952 SKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLG------RRHGSAADWWSSGVCL 1025 (1205)
T ss_pred cccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCccccc------ccCCCcchhhhhhhhh
Confidence 43321100 0000 011223345568999999887 3566789999999999
Q ss_pred HHHHhCCCCCChhhhhc----c-----------CCCCcchHHHHHHHhccCCCCCCChH---HHHhcc
Q 004025 232 YELFSGMRLSKTEELRN----T-----------ASIPKSLLPDYQRLLSSMPSRRLNSS---KLIENS 281 (778)
Q Consensus 232 yel~tg~~p~~~~~l~~----~-----------~~iP~~L~~~i~~lL~~dP~~Rps~~---~lL~~~ 281 (778)
+|.++|.++|+...-.+ + ..++....+++.+++..++.+|..+. +.-.|+
T Consensus 1026 ~e~l~g~pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~ 1093 (1205)
T KOG0606|consen 1026 FEVLTGIPPFNAETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHP 1093 (1205)
T ss_pred hhhhcCCCCCCCcchhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcccccccccCC
Confidence 99999999987654322 2 23345677888899999999999876 444443
|
|
| >KOG0211 consensus Protein phosphatase 2A regulatory subunit A and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.48 E-value=7e-07 Score=105.77 Aligned_cols=188 Identities=20% Similarity=0.167 Sum_probs=160.4
Q ss_pred cCCChhhhhhchHHHHHHHHhhCC--CCchhhHHHHHhccCCChhhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhh
Q 004025 325 EQLPRQIVLKKLLPLLASALEFGS--AAAPALTALLKMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQS 402 (778)
Q Consensus 325 ~~fp~~~~~~kILP~Ll~~~~~~~--~~~~~L~~llki~~~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~ 402 (778)
+..-.....+-.||.+....+... ....++..+=..+..+..+-|..+..+.+..+..+...+||-....+|+.++..
T Consensus 469 ~v~g~~~~s~slLp~i~el~~d~~wRvr~ail~~ip~la~q~~~~~~~~~~~~l~~~~l~d~v~~Ir~~aa~~l~~l~~~ 548 (759)
T KOG0211|consen 469 DVIGISTVSNSLLPAIVELAEDLLWRVRLAILEYIPQLALQLGVEFFDEKLAELLRTWLPDHVYSIREAAARNLPALVET 548 (759)
T ss_pred CcccchhhhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhhhhhhHHHHHHHHHHHhHHHHHH
Confidence 333444556667777776555431 111233333334445555667777788888888888999999999999999999
Q ss_pred cChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcc
Q 004025 403 FSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLN 482 (778)
Q Consensus 403 l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~ 482 (778)
++.++-...+.|.++.++.+++...|-.++-++-.+++.++......+|||.+-.+..|+.+.||.|.+.-|.+|.+.|.
T Consensus 549 ~G~~w~~~~~i~k~L~~~~q~~y~~R~t~l~si~~la~v~g~ei~~~~Llp~~~~l~~D~vanVR~nvak~L~~i~~~L~ 628 (759)
T KOG0211|consen 549 FGSEWARLEEIPKLLAMDLQDNYLVRMTTLFSIHELAEVLGQEITCEDLLPVFLDLVKDPVANVRINVAKHLPKILKLLD 628 (759)
T ss_pred hCcchhHHHhhHHHHHHhcCcccchhhHHHHHHHHHHHHhccHHHHHHHhHHHHHhccCCchhhhhhHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchhhhHHHHHhhhhcCCCchhhhheeee
Q 004025 483 EGTRKRVLINAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 483 ~~~~~~vL~~af~~~~lkD~f~~~R~A~l~a 513 (778)
.+.+++.+.|+.- ...+|+....|.+|+.|
T Consensus 629 ~~~~~~~v~pll~-~L~~d~~~dvr~~a~~a 658 (759)
T KOG0211|consen 629 ESVRDEEVLPLLE-TLSSDQELDVRYRAILA 658 (759)
T ss_pred hHHHHHHHHHHHH-HhccCcccchhHHHHHH
Confidence 9999999999999 99999999999999999
|
|
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.39 E-value=2.3e-06 Score=87.63 Aligned_cols=108 Identities=16% Similarity=0.182 Sum_probs=77.4
Q ss_pred HHHHHHHHHHhcCCCCC--eeeEeeeeEecccccCCcccEEEEEecCCc---ChHHHHHHhCcCCCcchHHHHHHHHHHH
Q 004025 64 AAARNGVKRLRTVRHPN--ILAFLHSTEVENIDATSTKITIYIVTEPVM---PLSEKIKELGLEGSQRDEYYAWGLNQIA 138 (778)
Q Consensus 64 ~~~~~ev~~Lk~LrHPn--Ilk~~d~~e~e~~~g~~~~~~lyIVtE~v~---~L~~~L~~~~~~~~~~~~~i~~gl~QI~ 138 (778)
..+.+|.+.+..|+.-+ +.+.+.+.+...+. ...-|||||++. +|.+++......... .....+.+++
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~----~~~s~lite~l~~~~~L~~~~~~~~~~~~~---~~~~ll~~l~ 128 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGG----GYRSYLITEALPGAQDLRDLLQQWEQLDPS---QRRELLRALA 128 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCC----ceeEEEEEEeCCCcccHHHHHHhhcccchh---hHHHHHHHHH
Confidence 45778888777775333 34455555542211 246789999983 688888764332212 2334489999
Q ss_pred HHHHHHHcCCCccccccCCCCeEEcCCC---cEEEEeccccccc
Q 004025 139 KAVSFLNNDCKLVHGNVCLSSVVVTQTL---DWKLHAFDVLSEF 179 (778)
Q Consensus 139 ~aL~fLH~~~~ivH~dLkp~NI~v~~~g---~~KL~dFgla~~~ 179 (778)
..+.-||. ++++|+|+++.||||+.++ .+.|+||+-++..
T Consensus 129 ~~i~~lH~-~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 129 RLIAKLHD-AGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHHHHH-CcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 99999995 9999999999999999887 8999999987654
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.2e-06 Score=89.45 Aligned_cols=75 Identities=13% Similarity=0.049 Sum_probs=49.1
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCC--CeeeEeeeeEecccccCCcccEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHP--NILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHP--nIlk~~d~~e~e~~~g~~~~~~l 102 (778)
.++.|. + .+|+++.. +|..+++|........ .....+.+|++.++.+++. .+.+++........ ....
T Consensus 5 ~l~~G~~n--~~~~v~~~-~g~~~ilK~~~~~~~~-~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~-----~~~~ 75 (223)
T cd05154 5 QLSGGQSN--LTYLLTAG-GGRRLVLRRPPPGALL-PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSV-----LGTP 75 (223)
T ss_pred ecCCCccc--eEEEEEec-CCcceEEEeCCCcccC-cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCc-----cCCc
Confidence 456665 6 78998864 3689999997654221 1234578899999998753 35666665543210 1256
Q ss_pred EEEecCC
Q 004025 103 YIVTEPV 109 (778)
Q Consensus 103 yIVtE~v 109 (778)
|+||||+
T Consensus 76 ~~v~e~i 82 (223)
T cd05154 76 FYVMERV 82 (223)
T ss_pred eEEEEEe
Confidence 8999999
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=98.31 E-value=7.1e-06 Score=87.31 Aligned_cols=136 Identities=10% Similarity=0.111 Sum_probs=87.3
Q ss_pred EEEEeEECCCCCcEEEEEEeCCCCchhHHH----------HHHHHHHHHhcCCCCCe--eeEeeeeEecccccCCcccEE
Q 004025 35 SHFQGTSKDDGSPVSIFSISGTNAQDGHLA----------AARNGVKRLRTVRHPNI--LAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 35 ~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~----------~~~~ev~~Lk~LrHPnI--lk~~d~~e~e~~~g~~~~~~l 102 (778)
.|++... .|+.|.||.+....-.+ ..+ .+.+|++.+..|..-+| ...+.+.+... ++ ....-
T Consensus 37 rvvr~~~--~g~~~~vKr~~~~~~~~-~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~-~~--~~~~s 110 (268)
T PRK15123 37 RTLRFEL--AGKSYFLKWHRGTGWGE-IFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGS-NP--ATRTS 110 (268)
T ss_pred eEEEEEE--CCEEEEEEEecCCcHHH-HhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecC-CC--cccee
Confidence 4556554 57789999875432111 111 37788888887753332 22333333211 00 02356
Q ss_pred EEEecCCc---ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC-------CCcEEEEe
Q 004025 103 YIVTEPVM---PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ-------TLDWKLHA 172 (778)
Q Consensus 103 yIVtE~v~---~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~-------~g~~KL~d 172 (778)
|||||++. +|.+++....... .........+.+|+..+.-||. +|++|||+++.||+++. ++.+.|+|
T Consensus 111 ~LVte~l~~~~sL~~~~~~~~~~~-~~~~~~~~ll~~la~~i~~LH~-~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LID 188 (268)
T PRK15123 111 FIITEDLAPTISLEDYCADWATNP-PDPRLKRMLIKRVATMVRDMHA-AGINHRDCYICHFLLHLPFPGREEDLKLSVID 188 (268)
T ss_pred EEEEeeCCCCccHHHHHHhhcccC-CCHHHHHHHHHHHHHHHHHHHH-CcCccCCCChhhEEEeccccCCCCCceEEEEE
Confidence 89999993 5888886432111 1122233458999999999995 99999999999999975 46799999
Q ss_pred cccccc
Q 004025 173 FDVLSE 178 (778)
Q Consensus 173 Fgla~~ 178 (778)
|+.+..
T Consensus 189 l~r~~~ 194 (268)
T PRK15123 189 LHRAQI 194 (268)
T ss_pred CCcccc
Confidence 998753
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.30 E-value=5.8e-06 Score=81.64 Aligned_cols=127 Identities=14% Similarity=0.140 Sum_probs=85.8
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch------hHHHHHHHHHHHHhcCCCCCe--eeEeeeeEecccccCC
Q 004025 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD------GHLAAARNGVKRLRTVRHPNI--LAFLHSTEVENIDATS 97 (778)
Q Consensus 27 lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~------~~~~~~~~ev~~Lk~LrHPnI--lk~~d~~e~e~~~g~~ 97 (778)
+..|. . .+|.+... |.+|.+|.=-.+.-.. -..+..++|.++|.+++--+| ..++++..
T Consensus 4 i~~GAEa--~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~-------- 71 (204)
T COG3642 4 IKQGAEA--IIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDP-------- 71 (204)
T ss_pred hhCCcce--eEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcC--------
Confidence 44555 4 57776543 4556677544433221 234567789999998874333 33444332
Q ss_pred cccEEEEEecCC-c-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV-M-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v-~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
....|+|||+ + .|.+.|.... ... +..|-.-+.-|| .++|+||||.++||++..++ +.++|||+
T Consensus 72 --~~~~I~me~I~G~~lkd~l~~~~------~~~----~r~vG~~vg~lH-~~givHGDLTtsNiIl~~~~-i~~IDfGL 137 (204)
T COG3642 72 --DNGLIVMEYIEGELLKDALEEAR------PDL----LREVGRLVGKLH-KAGIVHGDLTTSNIILSGGR-IYFIDFGL 137 (204)
T ss_pred --CCCEEEEEEeCChhHHHHHHhcc------hHH----HHHHHHHHHHHH-hcCeecCCCccceEEEeCCc-EEEEECCc
Confidence 2568999999 3 4777877651 222 677777888899 49999999999999997655 99999999
Q ss_pred cccc
Q 004025 176 LSEF 179 (778)
Q Consensus 176 a~~~ 179 (778)
...-
T Consensus 138 g~~s 141 (204)
T COG3642 138 GEFS 141 (204)
T ss_pred cccc
Confidence 7643
|
|
| >KOG2137 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.29 E-value=5e-06 Score=95.76 Aligned_cols=149 Identities=21% Similarity=0.292 Sum_probs=119.9
Q ss_pred CCChhhhhhchHHHHHHHHhhCCCCchhhHHHH----HhccCCChhhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHh
Q 004025 326 QLPRQIVLKKLLPLLASALEFGSAAAPALTALL----KMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQ 401 (778)
Q Consensus 326 ~fp~~~~~~kILP~Ll~~~~~~~~~~~~L~~ll----ki~~~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~ 401 (778)
..+..-...+++|.|...++... .-.++..|| -|.++++.|+|.++|+|.|...|.+.|++|.-..|+.++.+.+
T Consensus 340 ~~s~~~~~~~~~p~l~pi~~~~~-~~~~~l~i~e~mdlL~~Kt~~e~~~~~IlplL~~S~~~~~~~iQ~~~L~~lptv~e 418 (700)
T KOG2137|consen 340 GLSQNEFGPKMLPALKPIYSASD-PKQALLFILENMDLLKEKTPPEEVKEKILPLLYRSLEDSDVQIQELALQILPTVAE 418 (700)
T ss_pred ccchhhhhhhhhHHHHHHhccCC-cccchhhHHhhHHHHHhhCChHHHHHHHHHHHHHHhcCcchhhHHHHHHhhhHHHH
Confidence 44555667788888888887622 222333333 4678899999999999999999999999999999999999999
Q ss_pred hcChhhhhhcchHHHHhh-cCCCcHHHHHHHHHHHHhhhccCChhhHhHHHHHHHHhhccCCCCcchhhHHHHHHH
Q 004025 402 SFSAQVVDEQVYPHVATG-FADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGN 476 (778)
Q Consensus 402 ~l~~~~v~~~I~P~l~~g-f~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~k 476 (778)
.++-..|++.|+|.+... |..++..++-.+|-++-.++..++.-.+..+++|++...+.+ +|.|-.-++-...+
T Consensus 419 ~iD~~~vk~~ilP~l~~l~~~tt~~~vkvn~L~c~~~l~q~lD~~~v~d~~lpi~~~~~~~-dp~iv~~~~~i~~~ 493 (700)
T KOG2137|consen 419 SIDVPFVKQAILPRLKNLAFKTTNLYVKVNVLPCLAGLIQRLDKAAVLDELLPILKCIKTR-DPAIVMGFLRIYEA 493 (700)
T ss_pred hccHHHHHHHHHHHhhcchhcccchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCC-CcHHHHHHHHHHHH
Confidence 999999999999999776 667788999999999999999999999999999999999764 34444433333333
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.27 E-value=8.2e-06 Score=80.24 Aligned_cols=143 Identities=16% Similarity=0.042 Sum_probs=95.0
Q ss_pred eccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch------hHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 23 IGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD------GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 23 i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~------~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
..+.+-+|. + .|+.+.. .|+.+.||.=..+.-.. -...+.++|.+.|.+++--+|.--.=++.+..
T Consensus 11 ~l~likQGAEA--rv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~--- 83 (229)
T KOG3087|consen 11 SLELIKQGAEA--RVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTY--- 83 (229)
T ss_pred cceeeecccee--eEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecC---
Confidence 344556676 6 7888887 58888888654433222 22455778999998887444432222222222
Q ss_pred CCcccEEEEEecCC-c--ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC-cE--E
Q 004025 96 TSTKITIYIVTEPV-M--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-DW--K 169 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g-~~--K 169 (778)
.-.|+|||+ + .+.+++......... ++-..-.+.+|-+.+.-|| +..++||||..+||++..+| .| .
T Consensus 84 -----~~~i~ME~~~g~~~vk~~i~~~~~~~~~-d~~~~~~~~~iG~~igklH-~ndiiHGDLTTSNill~~~~~~~~~~ 156 (229)
T KOG3087|consen 84 -----GGQIYMEFIDGASTVKDFILSTMEDESE-DEGLAELARRIGELIGKLH-DNDIIHGDLTTSNILLRSDGNQITPI 156 (229)
T ss_pred -----CCeEEEEeccchhHHHHHHHHHccCccc-chhHHHHHHHHHHHHHHhh-hCCeecccccccceEEecCCCcCceE
Confidence 347889999 4 477777765432222 2222344888999999999 59999999999999998655 45 8
Q ss_pred EEeccccccc
Q 004025 170 LHAFDVLSEF 179 (778)
Q Consensus 170 L~dFgla~~~ 179 (778)
|+|||+...-
T Consensus 157 lIdfgls~~s 166 (229)
T KOG3087|consen 157 LIDFGLSSVS 166 (229)
T ss_pred EEeecchhcc
Confidence 9999997644
|
|
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.25 E-value=7.5e-06 Score=85.30 Aligned_cols=137 Identities=16% Similarity=0.101 Sum_probs=93.6
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCC------------------Cc--hhHHHHHHHHHHHHhcCCCC
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTN------------------AQ--DGHLAAARNGVKRLRTVRHP 79 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~------------------~~--~~~~~~~~~ev~~Lk~LrHP 79 (778)
+.|+.+||.|- + .||.|... .|.+++||.-.... .. ......+++|++.|..|.-.
T Consensus 93 e~iG~~IGvGKEs--dVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~ 169 (304)
T COG0478 93 EAIGTKIGVGKES--DVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPE 169 (304)
T ss_pred HhhccccccCccc--eEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhc
Confidence 56788899988 8 89999976 68999999764210 00 01244678999999998644
Q ss_pred --CeeeEeeeeEecccccCCcccEEEEEecCCc--ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 004025 80 --NILAFLHSTEVENIDATSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNV 155 (778)
Q Consensus 80 --nIlk~~d~~e~e~~~g~~~~~~lyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dL 155 (778)
.|.+.++. +.-.+|||++. +|... ........+. +..|+.-+.-+- .+|+||||+
T Consensus 170 G~~VP~P~~~------------nRHaVvMe~ieG~eL~~~----r~~~en~~~i----l~~il~~~~~~~-~~GiVHGDl 228 (304)
T COG0478 170 GVKVPKPIAW------------NRHAVVMEYIEGVELYRL----RLDVENPDEI----LDKILEEVRKAY-RRGIVHGDL 228 (304)
T ss_pred CCCCCCcccc------------ccceeeeehcccceeecc----cCcccCHHHH----HHHHHHHHHHHH-HcCccccCC
Confidence 45555543 25689999994 44432 1111122232 444444444444 389999999
Q ss_pred CCCCeEEcCCCcEEEEecccccccCC
Q 004025 156 CLSSVVVTQTLDWKLHAFDVLSEFDG 181 (778)
Q Consensus 156 kp~NI~v~~~g~~KL~dFgla~~~~~ 181 (778)
++-||+|+++|.+.++||--+.....
T Consensus 229 SefNIlV~~dg~~~vIDwPQ~v~~~h 254 (304)
T COG0478 229 SEFNILVTEDGDIVVIDWPQAVPISH 254 (304)
T ss_pred chheEEEecCCCEEEEeCcccccCCC
Confidence 99999999999999999987766543
|
|
| >PRK09902 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.11 E-value=3.7e-05 Score=78.28 Aligned_cols=137 Identities=11% Similarity=0.060 Sum_probs=89.1
Q ss_pred EEEEeEECCCCCcEEEEEEeCCCCc----hhHHHHHHHHHHHHhcCCCC--CeeeEeeeeEecccccCCcccEEEEEecC
Q 004025 35 SHFQGTSKDDGSPVSIFSISGTNAQ----DGHLAAARNGVKRLRTVRHP--NILAFLHSTEVENIDATSTKITIYIVTEP 108 (778)
Q Consensus 35 ~Vy~g~~k~~g~~VaIK~~~~~~~~----~~~~~~~~~ev~~Lk~LrHP--nIlk~~d~~e~e~~~g~~~~~~lyIVtE~ 108 (778)
.|+.-... |..+-+|.-...... ..-...+.+|+..|++|..- .+.+++ +++.....+ ...-+||||-
T Consensus 33 gV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~---~~rA~LVTe~ 106 (216)
T PRK09902 33 GVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEG---EWRALLVTED 106 (216)
T ss_pred eEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCC---ceEEEEEEEe
Confidence 57775543 445666654321100 11245688999988888622 255555 333211111 4568999998
Q ss_pred Cc---ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCc--EEEEeccccccc
Q 004025 109 VM---PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD--WKLHAFDVLSEF 179 (778)
Q Consensus 109 v~---~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~--~KL~dFgla~~~ 179 (778)
++ +|.+++.+....... ...-..++.+|+.+|.-|| +.++.|+|+.+.||+++.+|. ++|+||+-++..
T Consensus 107 L~g~~~L~~~l~~~~~~~~~-~~~k~~il~~va~~ia~LH-~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~~ 180 (216)
T PRK09902 107 MAGFISIADWYAQHAVSPYS-DEVRQAMLKAVALAFKKMH-SVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRR 180 (216)
T ss_pred CCCCccHHHHHhcCCcCCcc-hHHHHHHHHHHHHHHHHHH-HCCCcCCCCCHhheeecCCCCeeEEEEEhhccchh
Confidence 84 688888765432111 1112233899999999999 599999999999999987777 999999987653
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.11 E-value=3.2e-05 Score=88.93 Aligned_cols=181 Identities=13% Similarity=0.150 Sum_probs=160.0
Q ss_pred hhhchHHHHHHHHhhCCCC--chhhHHHHHhccCCChhhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhh
Q 004025 332 VLKKLLPLLASALEFGSAA--APALTALLKMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVD 409 (778)
Q Consensus 332 ~~~kILP~Ll~~~~~~~~~--~~~L~~llki~~~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~ 409 (778)
...+|+|.|++.|...+.. ...|.-+.+....|+.+.+.+.|+|.+..-|.+++..+|..-|..|..++.+|++..++
T Consensus 327 yq~~i~p~l~kLF~~~Dr~iR~~LL~~i~~~i~~Lt~~~~~d~I~phv~~G~~DTn~~Lre~Tlksm~~La~kL~~~~Ln 406 (690)
T KOG1243|consen 327 YQVRIIPVLLKLFKSPDRQIRLLLLQYIEKYIDHLTKQILNDQIFPHVALGFLDTNATLREQTLKSMAVLAPKLSKRNLN 406 (690)
T ss_pred cccchhhhHHHHhcCcchHHHHHHHHhHHHHhhhcCHHhhcchhHHHHHhhcccCCHHHHHHHHHHHHHHHhhhchhhhc
Confidence 6778999999999876543 34566788999999999999999999999999999999999999999999999999999
Q ss_pred hcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhh
Q 004025 410 EQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRV 489 (778)
Q Consensus 410 ~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~v 489 (778)
..++-+|..+=.|....||-.|.-.+..++|.|.....++-|.-.+.+-..|+.+.=|.-...-+.....++..++.+.-
T Consensus 407 ~Ellr~~ar~q~d~~~~irtntticlgki~~~l~~~~R~~vL~~aftralkdpf~paR~a~v~~l~at~~~~~~~~va~k 486 (690)
T KOG1243|consen 407 GELLRYLARLQPDEHGGIRTNTTICLGKIAPHLAASVRKRVLASAFTRALKDPFVPARKAGVLALAATQEYFDQSEVANK 486 (690)
T ss_pred HHHHHHHHhhCccccCcccccceeeecccccccchhhhccccchhhhhhhcCCCCCchhhhhHHHhhcccccchhhhhhh
Confidence 99999999998899999999999999999999977665555555566666799999999999999999999999888877
Q ss_pred hHHHHHhhhhcCCCchhhhheeee
Q 004025 490 LINAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 490 L~~af~~~~lkD~f~~~R~A~l~a 513 (778)
++|... -.+.|+..-.|--|..+
T Consensus 487 Ilp~l~-pl~vd~e~~vr~~a~~~ 509 (690)
T KOG1243|consen 487 ILPSLV-PLTVDPEKTVRDTAEKA 509 (690)
T ss_pred cccccc-ccccCcccchhhHHHHH
Confidence 888888 78999998888777654
|
|
| >COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.10 E-value=4.4e-05 Score=83.34 Aligned_cols=236 Identities=14% Similarity=0.121 Sum_probs=135.6
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+-..+..+|.|+ + .+|..-.- + -+.-|++.+...... .+.-....+.=.||-+-.=+ .+....--|+..
T Consensus 12 ~i~~gr~LgqGgea--~ly~l~e~--~-d~VAKIYh~Pppa~~----aqk~a~la~~p~~p~~~~rv-aWPqa~L~G~~~ 81 (637)
T COG4248 12 PIPPGRPLGQGGEA--DLYTLGEV--R-DQVAKIYHAPPPAAQ----AQKVAELAATPDAPLLNYRV-AWPQATLHGGRR 81 (637)
T ss_pred ccCCCccccCCccc--eeeecchh--h-chhheeecCCCchHH----HHHHHHhccCCCCcchhhhh-cccHHHhhCCCc
Confidence 445677888887 4 44443211 2 244588876432111 11111222333576543311 111111111111
Q ss_pred ccEEEEEecCCc---ChHHHHHHhC---cCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 99 KITIYIVTEPVM---PLSEKIKELG---LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 99 ~~~lyIVtE~v~---~L~~~L~~~~---~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
...+-+.|..+. +...++.-.. .-....-.++......|+.+..-||+ .|.+-||++++|++|++++.+.|.|
T Consensus 82 ~~~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~-~Gh~vGDVn~~~~lVsd~~~V~LVd 160 (637)
T COG4248 82 GKVIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHE-HGHVVGDVNQNSFLVSDDSKVVLVD 160 (637)
T ss_pred cceeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHh-cCCcccccCccceeeecCceEEEEc
Confidence 335888898883 5555543221 11112233455668899999999996 8999999999999999999999998
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccc-cccccccCCCCCcchhHHHHHHHHHHHhC-CCCCChhhh----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAK-SDWTAVRKSPPWSIDSWGLGCLIYELFSG-MRLSKTEEL---- 246 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~-~~~~~~~~~~~~~~DiwSLG~liyel~tg-~~p~~~~~l---- 246 (778)
=+--....+. .....-++...|.|||+.. +.+.. ..-+...|.|+||+|||+++.| +.||..-.+
T Consensus 161 sDsfqi~~ng-------~~~~cpVg~~eftPPElQ~~~sf~g--~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~a 231 (637)
T COG4248 161 SDSFQINANG-------TLHLCPVGVSEFTPPELQTLPSFVG--FERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDA 231 (637)
T ss_pred ccceeeccCC-------ceEecccCccccCCHHHhccccccc--cCCCccccchhHHHHHHHHHhcCCCCCCcccccCCC
Confidence 6543322211 1111123345899999976 32211 2334578999999999999887 566632111
Q ss_pred ------------------hcc-----------CCCCcchHHHHHHHhcc--CCCCCCChH
Q 004025 247 ------------------RNT-----------ASIPKSLLPDYQRLLSS--MPSRRLNSS 275 (778)
Q Consensus 247 ------------------~~~-----------~~iP~~L~~~i~~lL~~--dP~~Rps~~ 275 (778)
+.. .-+|+.+..++.+|+.. ++.-||+++
T Consensus 232 p~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~ 291 (637)
T COG4248 232 PNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAK 291 (637)
T ss_pred CCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHH
Confidence 000 12456677788888764 577899974
|
|
| >COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=97.80 E-value=8.6e-05 Score=76.80 Aligned_cols=136 Identities=14% Similarity=0.120 Sum_probs=88.9
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC----------------------chhHHHHHHHHHHHHhcCCCCC--
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA----------------------QDGHLAAARNGVKRLRTVRHPN-- 80 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~----------------------~~~~~~~~~~ev~~Lk~LrHPn-- 80 (778)
.|.+|- . +||.|.. .++..|+||++..... ........+.|++.|+++..-+
T Consensus 55 ~istGKEA--~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVr 131 (268)
T COG1718 55 CISTGKEA--NVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVR 131 (268)
T ss_pred eecCCcce--EEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 344444 4 8999986 4789999999974311 0122334678999999986433
Q ss_pred eeeEeeeeEecccccCCcccEEEEEecCCcCh---HHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCC
Q 004025 81 ILAFLHSTEVENIDATSTKITIYIVTEPVMPL---SEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCL 157 (778)
Q Consensus 81 Ilk~~d~~e~e~~~g~~~~~~lyIVtE~v~~L---~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp 157 (778)
+.+-+.+. .-.||||+++.= .-.|+....... .......++++.+.-|-..+++||+||+.
T Consensus 132 vP~Pi~~~------------~nVLvMEfIg~~g~pAP~LkDv~~e~~----e~~~~~~~~v~~~~~l~~~a~LVHgDLSE 195 (268)
T COG1718 132 VPEPIAFR------------NNVLVMEFIGDDGLPAPRLKDVPLELE----EAEGLYEDVVEYMRRLYKEAGLVHGDLSE 195 (268)
T ss_pred CCCceeec------------CCeEEEEeccCCCCCCCCcccCCcCch----hHHHHHHHHHHHHHHHHHhcCcccccchh
Confidence 33333333 247999999521 111222221111 11222667888888777569999999999
Q ss_pred CCeEEcCCCcEEEEecccccccCC
Q 004025 158 SSVVVTQTLDWKLHAFDVLSEFDG 181 (778)
Q Consensus 158 ~NI~v~~~g~~KL~dFgla~~~~~ 181 (778)
-||++. +|...++||+-+.....
T Consensus 196 yNiL~~-~~~p~iID~~QaV~~~h 218 (268)
T COG1718 196 YNILVH-DGEPYIIDVSQAVTIDH 218 (268)
T ss_pred hheEEE-CCeEEEEECccccccCC
Confidence 999998 88999999998877654
|
|
| >KOG0211 consensus Protein phosphatase 2A regulatory subunit A and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.0002 Score=85.29 Aligned_cols=209 Identities=20% Similarity=0.256 Sum_probs=164.7
Q ss_pred chhhhcCCChhhhhhchHHHHHHHHhhCCCCchhhHHHH---Hhcc----CCChhhhhhhhHHHHHHhhcCChHHHHHHH
Q 004025 320 LPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALL---KMGS----WLSTEEFSVKVLPTIVKLFASNDRAIRVAL 392 (778)
Q Consensus 320 L~~~l~~fp~~~~~~kILP~Ll~~~~~~~~~~~~L~~ll---ki~~----~l~~eef~~~i~P~i~~lF~~~Dr~iR~~L 392 (778)
...+.+.+|..-...-++|.++..++... +.+...+. .... ...-+......+|.|+.+=...-+.+|..+
T Consensus 422 ~~~~~p~~~k~~ti~~llp~~~~~l~de~--~~V~lnli~~ls~~~~v~~v~g~~~~s~slLp~i~el~~d~~wRvr~ai 499 (759)
T KOG0211|consen 422 ITGLSPILPKERTISELLPLLIGNLKDED--PIVRLNLIDKLSLLEEVNDVIGISTVSNSLLPAIVELAEDLLWRVRLAI 499 (759)
T ss_pred ccccCccCCcCcCccccChhhhhhcchhh--HHHHHhhHHHHHHHHhccCcccchhhhhhhhhhhhhhccchhHHHHHHH
Confidence 33445556655555566777776555432 22222222 2222 233466778889999999655558999999
Q ss_pred HHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHHHHHHHhhccCCCCcchhhHHH
Q 004025 393 LQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTI 472 (778)
Q Consensus 393 L~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~LL~~laklq~D~~~~IRtnt~i 472 (778)
+++++.....+....++++.-+.+.+++.|....||+.+.+.+..++..++...-..++.|.+.....++.--.|.-+..
T Consensus 500 l~~ip~la~q~~~~~~~~~~~~l~~~~l~d~v~~Ir~~aa~~l~~l~~~~G~~w~~~~~i~k~L~~~~q~~y~~R~t~l~ 579 (759)
T KOG0211|consen 500 LEYIPQLALQLGVEFFDEKLAELLRTWLPDHVYSIREAAARNLPALVETFGSEWARLEEIPKLLAMDLQDNYLVRMTTLF 579 (759)
T ss_pred HHHHHHHHHhhhhHHhhHHHHHHHHhhhhhhHHHHHHHHHHHhHHHHHHhCcchhHHHhhHHHHHHhcCcccchhhHHHH
Confidence 99999999999999999988888888899999999999999999999999987778888888888877777899999999
Q ss_pred HHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhhheeee--c---c--------------------CCHHHHHHHHHH
Q 004025 473 LLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL--S---Y--------------------LNCDVRSKAFQA 527 (778)
Q Consensus 473 cl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~l~a--~---~--------------------~~~~VR~~a~~~ 527 (778)
||.-|++.++.+...+-|+|-|- +..+|+.+-.|.-++.. . + .+..||-.|..+
T Consensus 580 si~~la~v~g~ei~~~~Llp~~~-~l~~D~vanVR~nvak~L~~i~~~L~~~~~~~~v~pll~~L~~d~~~dvr~~a~~a 658 (759)
T KOG0211|consen 580 SIHELAEVLGQEITCEDLLPVFL-DLVKDPVANVRINVAKHLPKILKLLDESVRDEEVLPLLETLSSDQELDVRYRAILA 658 (759)
T ss_pred HHHHHHHHhccHHHHHHHhHHHH-HhccCCchhhhhhHHHHHHHHHhhcchHHHHHHHHHHHHHhccCcccchhHHHHHH
Confidence 99999999999999999999999 99999999999888776 1 1 677788777766
Q ss_pred HHHH
Q 004025 528 VDQF 531 (778)
Q Consensus 528 ~~~~ 531 (778)
+...
T Consensus 659 ~~~i 662 (759)
T KOG0211|consen 659 FGSI 662 (759)
T ss_pred HHHH
Confidence 5543
|
|
| >PRK09687 putative lyase; Provisional | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00034 Score=75.01 Aligned_cols=129 Identities=17% Similarity=0.159 Sum_probs=74.0
Q ss_pred hhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhh-cCCCcHHHHHHHHHHHHhhhccCChhhHhH
Q 004025 371 VKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATG-FADTSAFLREMTLKSMLVLAPKLSQRTISG 449 (778)
Q Consensus 371 ~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~g-f~Dt~~~iRe~tlksi~~l~pkL~~~~l~~ 449 (778)
..+++.+.+++.+.|+.+|.....-|-.+...-. ....++|.|... +.|.++.||..++.++-.+...-... ..
T Consensus 53 ~~~~~~l~~ll~~~d~~vR~~A~~aLg~lg~~~~---~~~~a~~~L~~l~~~D~d~~VR~~A~~aLG~~~~~~~~~--~~ 127 (280)
T PRK09687 53 QDVFRLAIELCSSKNPIERDIGADILSQLGMAKR---CQDNVFNILNNLALEDKSACVRASAINATGHRCKKNPLY--SP 127 (280)
T ss_pred chHHHHHHHHHhCCCHHHHHHHHHHHHhcCCCcc---chHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccccccc--ch
Confidence 4556666666666666677666655555433111 023456666544 56666777777666666554322111 23
Q ss_pred HHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhhheeee
Q 004025 450 SLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 450 ~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~l~a 513 (778)
.++..+..+..|+++.||..++..||+|.. .--++++. +.|+|+.+-.|.+|+++
T Consensus 128 ~a~~~l~~~~~D~~~~VR~~a~~aLg~~~~--------~~ai~~L~-~~L~d~~~~VR~~A~~a 182 (280)
T PRK09687 128 KIVEQSQITAFDKSTNVRFAVAFALSVIND--------EAAIPLLI-NLLKDPNGDVRNWAAFA 182 (280)
T ss_pred HHHHHHHHHhhCCCHHHHHHHHHHHhccCC--------HHHHHHHH-HHhcCCCHHHHHHHHHH
Confidence 445555555566666777777776666531 22456666 66777777777776666
|
|
| >COG0661 AarF Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00046 Score=79.68 Aligned_cols=139 Identities=14% Similarity=0.109 Sum_probs=81.6
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC------------------------c--------hhHHHH------H
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA------------------------Q--------DGHLAA------A 66 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~------------------------~--------~~~~~~------~ 66 (778)
.++.++ | .||+|+.++ |+.|+||+..-.-. . +...+. +
T Consensus 132 PiAsASIa--QVH~A~L~s-G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy 208 (517)
T COG0661 132 PIASASIA--QVHRAVLKS-GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDY 208 (517)
T ss_pred chhhhhHh--hheeEEecC-CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCH
Confidence 455565 7 899999884 99999999863100 0 001111 2
Q ss_pred HHHHHHHhcC----CCCCeeeEeeeeEecccccCCcccEEEEEecCCc--ChHHH--HHHhCcCCCcchHHHHHHHHHHH
Q 004025 67 RNGVKRLRTV----RHPNILAFLHSTEVENIDATSTKITIYIVTEPVM--PLSEK--IKELGLEGSQRDEYYAWGLNQIA 138 (778)
Q Consensus 67 ~~ev~~Lk~L----rHPnIlk~~d~~e~e~~~g~~~~~~lyIVtE~v~--~L~~~--L~~~~~~~~~~~~~i~~gl~QI~ 138 (778)
++|...+.++ ++..=+++=.+|.+-+ ..-.|+|||+. ++.+. ++..+.. ..+....++...+
T Consensus 209 ~~EA~n~~~~~~nf~~~~~v~VP~V~we~t-------~~~VLtmE~i~Gi~i~d~~~l~~~g~d---~k~ia~~~~~~f~ 278 (517)
T COG0661 209 RREAANAERFRENFKDDPDVYVPKVYWEYT-------TRRVLTMEWIDGIKISDIAALKSAGID---RKELAELLVRAFL 278 (517)
T ss_pred HHHHHHHHHHHHHcCCCCCeEeceeehhcc-------CCcEEEEEeeCCEecccHHHHHhcCCC---HHHHHHHHHHHHH
Confidence 3344444444 2333344444443221 24589999993 56665 4443332 2222222222211
Q ss_pred HHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCC
Q 004025 139 KAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (778)
Q Consensus 139 ~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~ 181 (778)
+ .-| + .++.|+|.+|.||+|+.+|.+-+.|||+...+..
T Consensus 279 ~-q~~-~--dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 279 R-QLL-R--DGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred H-HHH-h--cCccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 1 111 2 4799999999999999999999999999877653
|
|
| >PRK09687 putative lyase; Provisional | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00082 Score=72.10 Aligned_cols=127 Identities=14% Similarity=0.127 Sum_probs=94.6
Q ss_pred hhhhHHHHHHh-hcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHh
Q 004025 370 SVKVLPTIVKL-FASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTIS 448 (778)
Q Consensus 370 ~~~i~P~i~~l-F~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~ 448 (778)
+..++|.+..+ ...+|..||.....-|-.+...-. .....++..+...+.|.++.||..++.++. ++. +
T Consensus 88 ~~~a~~~L~~l~~~D~d~~VR~~A~~aLG~~~~~~~--~~~~~a~~~l~~~~~D~~~~VR~~a~~aLg----~~~----~ 157 (280)
T PRK09687 88 QDNVFNILNNLALEDKSACVRASAINATGHRCKKNP--LYSPKIVEQSQITAFDKSTNVRFAVAFALS----VIN----D 157 (280)
T ss_pred hHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccccc--ccchHHHHHHHHHhhCCCHHHHHHHHHHHh----ccC----C
Confidence 34678888877 678889999877776655432221 113456778888899999999999999984 333 2
Q ss_pred HHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhhheeee
Q 004025 449 GSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 449 ~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~l~a 513 (778)
.+.++.|.++..|+++.||-+++..||+|.. ...-.++++. ++|.|+...+|.+|+.+
T Consensus 158 ~~ai~~L~~~L~d~~~~VR~~A~~aLg~~~~------~~~~~~~~L~-~~L~D~~~~VR~~A~~a 215 (280)
T PRK09687 158 EAAIPLLINLLKDPNGDVRNWAAFALNSNKY------DNPDIREAFV-AMLQDKNEEIRIEAIIG 215 (280)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHhcCCC------CCHHHHHHHH-HHhcCCChHHHHHHHHH
Confidence 4456667777789999999999999999921 1223467777 89999999999999998
|
|
| >KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00056 Score=74.17 Aligned_cols=140 Identities=16% Similarity=0.215 Sum_probs=92.7
Q ss_pred eeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCC------------------------CCchhHHHHHHHHHHHHhcC
Q 004025 22 NIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGT------------------------NAQDGHLAAARNGVKRLRTV 76 (778)
Q Consensus 22 ~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~------------------------~~~~~~~~~~~~ev~~Lk~L 76 (778)
+|...|..|- . .||.++. .+|+.+|||+|..+ +......-.+..|++.|++|
T Consensus 147 ~inGCiSTGKEA--NVYHat~-~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl 223 (520)
T KOG2270|consen 147 EINGCISTGKEA--NVYHATE-EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRL 223 (520)
T ss_pred ecccccccCccc--eeEeeec-CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHH
Confidence 4455666665 5 7999985 58899999999732 11112334578899999999
Q ss_pred CCCCeeeEeeeeEecccccCCcccEEEEEecCCcC---hHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCcccc
Q 004025 77 RHPNILAFLHSTEVENIDATSTKITIYIVTEPVMP---LSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHG 153 (778)
Q Consensus 77 rHPnIlk~~d~~e~e~~~g~~~~~~lyIVtE~v~~---L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~ 153 (778)
+.-+ +++-+.+.-. .-.|||++++- -.-.|+...+......+. -.|++.-+.-|-+.|++||.
T Consensus 224 ~~aG-IP~PePIlLk---------~hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~----Y~~~v~~MR~lY~~c~LVHA 289 (520)
T KOG2270|consen 224 NNAG-IPCPEPILLK---------NHVLVMEFLGRDGWAAPKLKDASLSTSKAREL----YQQCVRIMRRLYQKCRLVHA 289 (520)
T ss_pred HhcC-CCCCCceeee---------cceEeeeeccCCCCcCcccccccCChHHHHHH----HHHHHHHHHHHHHHhceecc
Confidence 8766 4444444431 45799999951 122333333332222222 45677777777778999999
Q ss_pred ccCCCCeEEcCCCcEEEEeccccccc
Q 004025 154 NVCLSSVVVTQTLDWKLHAFDVLSEF 179 (778)
Q Consensus 154 dLkp~NI~v~~~g~~KL~dFgla~~~ 179 (778)
||+--|+++ .+|.+.++|.+-+...
T Consensus 290 DLSEfN~Ly-hdG~lyiIDVSQSVE~ 314 (520)
T KOG2270|consen 290 DLSEFNLLY-HDGKLYIIDVSQSVEH 314 (520)
T ss_pred chhhhhheE-ECCEEEEEEccccccC
Confidence 999999999 5678888887765544
|
|
| >PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ] | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0024 Score=66.17 Aligned_cols=150 Identities=17% Similarity=0.250 Sum_probs=97.5
Q ss_pred HHHHHhhcCChHHHHHHHHHhHHHHHhhcChhh--hhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHH-
Q 004025 375 PTIVKLFASNDRAIRVALLQHIDQYGQSFSAQV--VDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSL- 451 (778)
Q Consensus 375 P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~--v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~L- 451 (778)
..|.+.+.+.--.|--..+.-+..+..++.... +-+.++|.++.-+.|++..||+.+..++..++...+. ...+
T Consensus 56 ~~i~~~l~d~Rs~v~~~A~~~l~~l~~~l~~~~~~~~~~~l~~Ll~~~~~~~~~i~~~a~~~L~~i~~~~~~---~~~~~ 132 (228)
T PF12348_consen 56 DAIIKQLSDLRSKVSKTACQLLSDLARQLGSHFEPYADILLPPLLKKLGDSKKFIREAANNALDAIIESCSY---SPKIL 132 (228)
T ss_dssp HHHHH-S-HH---HHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHHHGGG---HHHHHHHHHHHHHHHTTS-H-----HHH
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHCCc---HHHHH
Confidence 445554432222344455555566666655551 3466899999999999999999999999999987771 1233
Q ss_pred HHHHHhhccCCCCcchhhHHHHHHHhhhhcc--ccc-ch----hhhHHHHHhhhhcCCCchhhhheeeeccCCHHHHHHH
Q 004025 452 LKYLSKLQVDEEPAIRTNTTILLGNIASHLN--EGT-RK----RVLINAFTVRALRDTFSPARGAAKILSYLNCDVRSKA 524 (778)
Q Consensus 452 L~~laklq~D~~~~IRtnt~icl~kIa~~L~--~~~-~~----~vL~~af~~~~lkD~f~~~R~A~l~a~~~~~~VR~~a 524 (778)
++.+.....+..+.+|.-++.||..+....+ ... .. +.+++++. +.+.|+. .+||+.|
T Consensus 133 ~~~l~~~~~~Kn~~vR~~~~~~l~~~l~~~~~~~~~l~~~~~~~~l~~~l~-~~l~D~~--------------~~VR~~A 197 (228)
T PF12348_consen 133 LEILSQGLKSKNPQVREECAEWLAIILEKWGSDSSVLQKSAFLKQLVKALV-KLLSDAD--------------PEVREAA 197 (228)
T ss_dssp HHHHHHHTT-S-HHHHHHHHHHHHHHHTT-----GGG--HHHHHHHHHHHH-HHHTSS---------------HHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHccchHhhhcccchHHHHHHHHH-HHCCCCC--------------HHHHHHH
Confidence 7778888889999999999999999998888 222 12 45888888 8999986 7888889
Q ss_pred HHHHHHHHHHHHHHHhhc
Q 004025 525 FQAVDQFLQIVKQYHEKT 542 (778)
Q Consensus 525 ~~~~~~~l~~l~~~~~~~ 542 (778)
+++|..|.+...+-++.+
T Consensus 198 r~~~~~l~~~~~~~a~~~ 215 (228)
T PF12348_consen 198 RECLWALYSHFPERAESI 215 (228)
T ss_dssp HHHHHHHHHHH-HHH---
T ss_pred HHHHHHHHHHCCHhhccc
Confidence 999999888777766553
|
The domain is also found in other proteins involved in microtubule binding, including STU1, MOR1 and spindle pole body component Alp14.; PDB: 2QK2_A. |
| >KOG1235 consensus Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00067 Score=78.20 Aligned_cols=135 Identities=14% Similarity=0.135 Sum_probs=84.3
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC--------------------------------------ch-hHHHH
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA--------------------------------------QD-GHLAA 65 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~--------------------------------------~~-~~~~~ 65 (778)
.|+..+ | .||+|+.+. |+.|+||+=...-. .+ .....
T Consensus 168 piaaASla--QVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~E 244 (538)
T KOG1235|consen 168 PIAAASLA--QVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKE 244 (538)
T ss_pred hhhhcchh--heEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHH
Confidence 455555 6 899999885 99999998652100 00 11233
Q ss_pred HHHHHHHHhcCCCCC------eeeEeeeeEecccccCCcccEEEEEecCCc--ChH--HHHHHhCcCCCcch-HHHHHHH
Q 004025 66 ARNGVKRLRTVRHPN------ILAFLHSTEVENIDATSTKITIYIVTEPVM--PLS--EKIKELGLEGSQRD-EYYAWGL 134 (778)
Q Consensus 66 ~~~ev~~Lk~LrHPn------Ilk~~d~~e~e~~~g~~~~~~lyIVtE~v~--~L~--~~L~~~~~~~~~~~-~~i~~gl 134 (778)
++|.-+..+.++|-+ |.+++-.+.+ .-.++||||. ++. +.|++.+....... ..+.+.+
T Consensus 245 A~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st----------~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~~ 314 (538)
T KOG1235|consen 245 AKNAERFRENFKDFSLLTYVLVPKVYWDLST----------KRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAYL 314 (538)
T ss_pred HHhHHHHHHHHHhcccccceeCCeehhhcCc----------ceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHHH
Confidence 445545555666666 5555544432 5689999993 232 56666665432111 1122223
Q ss_pred HHHHHHHHHHHcCCCccccccCCCCeEEcC----CCcEEEEecccccccCC
Q 004025 135 NQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ----TLDWKLHAFDVLSEFDG 181 (778)
Q Consensus 135 ~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~----~g~~KL~dFgla~~~~~ 181 (778)
.|| |. .|++|+|=+|.||+|.. ++++.|-|||+...+..
T Consensus 315 ~qI-----f~---~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 315 EQI-----FK---TGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred HHH-----Hh---cCCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 333 32 46999999999999994 67899999999887654
|
|
| >PF12717 Cnd1: non-SMC mitotic condensation complex subunit 1 | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0013 Score=65.81 Aligned_cols=108 Identities=18% Similarity=0.261 Sum_probs=92.5
Q ss_pred hHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHHHHHHHhhccCCCC
Q 004025 385 DRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEP 464 (778)
Q Consensus 385 Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~LL~~laklq~D~~~ 464 (778)
|+.||..++.-|..++-+.+.- -+...|.++..+.|.++.||.+|+..+.+++-. +.-.+++.++..+.++-.|+++
T Consensus 1 ~~~vR~n~i~~l~DL~~r~~~~--ve~~~~~l~~~L~D~~~~VR~~al~~Ls~Li~~-d~ik~k~~l~~~~l~~l~D~~~ 77 (178)
T PF12717_consen 1 DPSVRNNAIIALGDLCIRYPNL--VEPYLPNLYKCLRDEDPLVRKTALLVLSHLILE-DMIKVKGQLFSRILKLLVDENP 77 (178)
T ss_pred CHHHHHHHHHHHHHHHHhCcHH--HHhHHHHHHHHHCCCCHHHHHHHHHHHHHHHHc-CceeehhhhhHHHHHHHcCCCH
Confidence 4678989999999888888743 367899999999999999999999999998843 4455678887888888899999
Q ss_pred cchhhHHHHHHHhhhhcccccchhhhHHHHH
Q 004025 465 AIRTNTTILLGNIASHLNEGTRKRVLINAFT 495 (778)
Q Consensus 465 ~IRtnt~icl~kIa~~L~~~~~~~vL~~af~ 495 (778)
.||..+..|+..++...+++.-..++...+.
T Consensus 78 ~Ir~~A~~~~~e~~~~~~~~~i~~~~~e~i~ 108 (178)
T PF12717_consen 78 EIRSLARSFFSELLKKRNPNIIYNNFPELIS 108 (178)
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence 9999999999999999888877777777776
|
|
| >PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ] | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0015 Score=67.67 Aligned_cols=116 Identities=22% Similarity=0.310 Sum_probs=90.5
Q ss_pred hhhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcc-hHHHHhhcCCCcHHHHHHHHHHHHhhhccCC-
Q 004025 366 TEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQV-YPHVATGFADTSAFLREMTLKSMLVLAPKLS- 443 (778)
Q Consensus 366 ~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I-~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~- 443 (778)
-+.|...++|.|++.+++.-..||-....-|..++++.+ +..++ ++.+..|+.+.++.+|+.++..+..++.+.+
T Consensus 88 ~~~~~~~~l~~Ll~~~~~~~~~i~~~a~~~L~~i~~~~~---~~~~~~~~~l~~~~~~Kn~~vR~~~~~~l~~~l~~~~~ 164 (228)
T PF12348_consen 88 FEPYADILLPPLLKKLGDSKKFIREAANNALDAIIESCS---YSPKILLEILSQGLKSKNPQVREECAEWLAIILEKWGS 164 (228)
T ss_dssp GHHHHHHHHHHHHHGGG---HHHHHHHHHHHHHHHTTS----H--HHHHHHHHHHTT-S-HHHHHHHHHHHHHHHTT---
T ss_pred HHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHCC---cHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHccc
Confidence 466778899999999999989999999999999999988 11234 8899999999999999999999999999988
Q ss_pred -hhhH-----hHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccc
Q 004025 444 -QRTI-----SGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEG 484 (778)
Q Consensus 444 -~~~l-----~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~ 484 (778)
...+ ...+.+.+.++-.|..+.||-..-.|+..+..+.+..
T Consensus 165 ~~~~l~~~~~~~~l~~~l~~~l~D~~~~VR~~Ar~~~~~l~~~~~~~ 211 (228)
T PF12348_consen 165 DSSVLQKSAFLKQLVKALVKLLSDADPEVREAARECLWALYSHFPER 211 (228)
T ss_dssp --GGG--HHHHHHHHHHHHHHHTSS-HHHHHHHHHHHHHHHHHH-HH
T ss_pred hHhhhcccchHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHh
Confidence 3332 2568999999999999999999999999998887654
|
The domain is also found in other proteins involved in microtubule binding, including STU1, MOR1 and spindle pole body component Alp14.; PDB: 2QK2_A. |
| >PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY) | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0014 Score=67.22 Aligned_cols=65 Identities=15% Similarity=0.188 Sum_probs=47.4
Q ss_pred EEEEEecCCc--ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccc
Q 004025 101 TIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (778)
Q Consensus 101 ~lyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~ 178 (778)
..+++|||+. +|.+... ..+.+ ...|..+|.-||. .|++|||.+|.|++++.+ .+++.||+..+.
T Consensus 117 ~~~ll~EYIeG~~l~d~~~--------i~e~~---~~ki~~~ikqlH~-~G~~HGD~hpgNFlv~~~-~i~iID~~~k~~ 183 (229)
T PF06176_consen 117 SYVLLMEYIEGVELNDIED--------IDEDL---AEKIVEAIKQLHK-HGFYHGDPHPGNFLVSNN-GIRIIDTQGKRM 183 (229)
T ss_pred EEEEEEEEecCeecccchh--------cCHHH---HHHHHHHHHHHHH-cCCccCCCCcCcEEEECC-cEEEEECccccc
Confidence 5568999993 4554321 11112 3567788999995 999999999999999855 599999986553
|
The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process |
| >PTZ00429 beta-adaptin; Provisional | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0027 Score=76.53 Aligned_cols=135 Identities=13% Similarity=0.183 Sum_probs=99.6
Q ss_pred hhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHH
Q 004025 372 KVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSL 451 (778)
Q Consensus 372 ~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~L 451 (778)
.+.|-+++++.++|-.+|=...-++..|.+.-+...+ -....|..-+.|.|+.||..+|+.|..|- ...+...+
T Consensus 68 ~LF~dVvk~~~S~d~elKKLvYLYL~~ya~~~pelal--LaINtl~KDl~d~Np~IRaLALRtLs~Ir----~~~i~e~l 141 (746)
T PTZ00429 68 YLFVDVVKLAPSTDLELKKLVYLYVLSTARLQPEKAL--LAVNTFLQDTTNSSPVVRALAVRTMMCIR----VSSVLEYT 141 (746)
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHcccChHHHH--HHHHHHHHHcCCCCHHHHHHHHHHHHcCC----cHHHHHHH
Confidence 3567788888888888886666666667654444322 24577788889999999999999887543 67777888
Q ss_pred HHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhhheeee
Q 004025 452 LKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 452 L~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~l~a 513 (778)
++.+.+...|..|-||-++++|+.||-..-..-....-+++-.. .+|.|+.+-+..+|+.+
T Consensus 142 ~~~lkk~L~D~~pYVRKtAalai~Kly~~~pelv~~~~~~~~L~-~LL~D~dp~Vv~nAl~a 202 (746)
T PTZ00429 142 LEPLRRAVADPDPYVRKTAAMGLGKLFHDDMQLFYQQDFKKDLV-ELLNDNNPVVASNAAAI 202 (746)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHhhCcccccccchHHHHH-HHhcCCCccHHHHHHHH
Confidence 88888888999999999999999998653322212333566677 78888888888888776
|
|
| >PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0027 Score=74.14 Aligned_cols=96 Identities=18% Similarity=0.269 Sum_probs=64.1
Q ss_pred chHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhH
Q 004025 412 VYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLI 491 (778)
Q Consensus 412 I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~ 491 (778)
+...+..-+.+.++.+|..+|+.+..+. ...+...+++.+.++..|+.|.||-++++|+.+|...-....+.. ++
T Consensus 80 ~~n~l~kdl~~~n~~~~~lAL~~l~~i~----~~~~~~~l~~~v~~ll~~~~~~VRk~A~~~l~~i~~~~p~~~~~~-~~ 154 (526)
T PF01602_consen 80 IINSLQKDLNSPNPYIRGLALRTLSNIR----TPEMAEPLIPDVIKLLSDPSPYVRKKAALALLKIYRKDPDLVEDE-LI 154 (526)
T ss_dssp HHHHHHHHHCSSSHHHHHHHHHHHHHH-----SHHHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCHCCHHGG-HH
T ss_pred HHHHHHHhhcCCCHHHHHHHHhhhhhhc----ccchhhHHHHHHHHHhcCCchHHHHHHHHHHHHHhccCHHHHHHH-HH
Confidence 4455666677777777777777777665 455556677777777777777777777777777776633333334 66
Q ss_pred HHHHhhhhcCCCchhhhheeee
Q 004025 492 NAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 492 ~af~~~~lkD~f~~~R~A~l~a 513 (778)
+.+. ++|+|+.+.++.+|+.+
T Consensus 155 ~~l~-~lL~d~~~~V~~~a~~~ 175 (526)
T PF01602_consen 155 PKLK-QLLSDKDPSVVSAALSL 175 (526)
T ss_dssp HHHH-HHTTHSSHHHHHHHHHH
T ss_pred HHHh-hhccCCcchhHHHHHHH
Confidence 7777 77777777777777666
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. Clathrin coats contain both clathrin and adaptor complexes that link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. The two major types of clathrin adaptor complexes are the heterotetrameric adaptor protein (AP) complexes, and the monomeric GGA (Golgi-localising, Gamma-adaptin ear domain homology, ARF-binding proteins) adaptors []. All AP complexes are heterotetramers composed of two large subunits (adaptins), a medium subunit (mu) and a small subunit (sigma). Each subunit has a specific function. Adaptin subunits recognise and bind to clathrin through their hinge region (clathrin box), and recruit accessory proteins that modulate AP function through their C-terminal appendage domains. By contrast, GGAs are monomers composed of four domains, which have functions similar to AP subunits: an N-terminal VHS (Vps27p/Hrs/Stam) domain, a GAT (GGA and Tom1) domain, a hinge region, and a C-terminal GAE (gamma-adaptin ear) domain. The GAE domain is similar to the AP gamma-adaptin ear domain, being responsible for the recruitment of accessory proteins that regulate clathrin-mediated endocytosis []. While clathrin mediates endocytic protein transport from ER to Golgi, coatomers (COPI, COPII) primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the N-terminal domain of various adaptins from different AP clathrin adaptor complexes (including AP1, AP2, AP3 and AP4), and from the beta and gamma subunits of various coatomer (COP) adaptors. This domain has a 2-layer alpha/alpha fold that forms a right-handed superhelix, and is a member of the ARM repeat superfamily []. The N-terminal region of the various AP adaptor proteins share strong sequence identity; by contrast, the C-terminal domains of different adaptins share similar structural folds, but have little sequence identity []. It has been proposed that the N-terminal domain interacts with another uniform component of the coated vesicles. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 1W63_C 2JKR_A 2JKT_A 2XA7_A 2VGL_B 3TJZ_E. |
| >TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172 | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0026 Score=66.16 Aligned_cols=135 Identities=10% Similarity=0.050 Sum_probs=74.9
Q ss_pred cCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCC--eeeEeeeeEecccccCCcccE
Q 004025 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPN--ILAFLHSTEVENIDATSTKIT 101 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPn--Ilk~~d~~e~e~~~g~~~~~~ 101 (778)
+.++.|. + .||+. .|..+.+|.+.... ....+++|.+.++.+..-+ +.+++++.+.. ..
T Consensus 7 ~~i~~G~t~--~~y~~----~~~~~VlR~~~~~~----~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~--------~~ 68 (226)
T TIGR02172 7 TQTGEGGNG--ESYTH----KTGKWMLKLYNPGF----DKETIKREFDASRKVFSLGIPTPHPFDLVEDG--------GR 68 (226)
T ss_pred eeecCCCCc--ceeEe----cCCCEEEEeCCCCC----CHHHHHHHHHHHHHHHHcCCCCCceEEEEecC--------Ce
Confidence 3566665 5 67863 25567788876422 2234688999998886333 35666666543 25
Q ss_pred EEEEecCC-c-C-hH--------------HHHHH----h-C--cCCCcchHHHHHH---HH-------HHHH-HHHHHH-
Q 004025 102 IYIVTEPV-M-P-LS--------------EKIKE----L-G--LEGSQRDEYYAWG---LN-------QIAK-AVSFLN- 145 (778)
Q Consensus 102 lyIVtE~v-~-~-L~--------------~~L~~----~-~--~~~~~~~~~i~~g---l~-------QI~~-aL~fLH- 145 (778)
.++|||++ | + +. ..+.+ . . ............. +. .+.. ...+|.
T Consensus 69 ~glv~e~i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~ 148 (226)
T TIGR02172 69 LGLIYELIVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKE 148 (226)
T ss_pred eeeeeeecCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHh
Confidence 78899998 3 2 11 11111 0 0 0111111111000 00 0111 122222
Q ss_pred --cCCCccccccCCCCeEEcCCCcEEEEecccccc
Q 004025 146 --NDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (778)
Q Consensus 146 --~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~ 178 (778)
....++|||++|.||+++++| ..++||+.+..
T Consensus 149 ~~~~~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 149 VPDTSTCLHGDFQIGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred CCCCCceEecCCCCCcEEEcCCC-cEEEechhcCc
Confidence 123578999999999999988 99999998764
|
This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636. |
| >cd05150 APH Aminoglycoside 3'-phosphotransferase (APH) | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0095 Score=62.24 Aligned_cols=29 Identities=21% Similarity=0.382 Sum_probs=26.1
Q ss_pred CccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 149 KLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 149 ~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
.++|||+.|.||++++++...|+||+.+.
T Consensus 164 ~l~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 164 VVTHGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred EEECCCCCCccEEEeCCcEEEEEEccccc
Confidence 48999999999999998778899999765
|
The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio |
| >PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0063 Score=62.17 Aligned_cols=140 Identities=16% Similarity=0.224 Sum_probs=74.1
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCC--eeeEeeeeEecccccCCcccEE
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPN--ILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPn--Ilk~~d~~e~e~~~g~~~~~~l 102 (778)
.++.|. + .+|...... ..+.+|..... .....+.+|+..++.|..-+ +.+++........ ....
T Consensus 4 ~l~~G~~n--~~~~v~~~~--~~~vlK~~~~~----~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~-----~~~~ 70 (239)
T PF01636_consen 4 PLSGGFSN--RVYRVTTDD--GRYVLKFYRPP----DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEF-----NGFP 70 (239)
T ss_dssp EEEESSSS--EEEEEEETT--SEEEEEEESSH----HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEE-----TSEE
T ss_pred cCCCCCee--eEEEEEECC--cEEEEEEeCCC----CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccc-----cccc
Confidence 455555 5 789988754 58889997642 23456778888888875332 4556653332221 2358
Q ss_pred EEEecCCc--ChHH----------------HHHHhC-c--CCC--cc-h----H----HHHH-------H----HHHHHH
Q 004025 103 YIVTEPVM--PLSE----------------KIKELG-L--EGS--QR-D----E----YYAW-------G----LNQIAK 139 (778)
Q Consensus 103 yIVtE~v~--~L~~----------------~L~~~~-~--~~~--~~-~----~----~i~~-------g----l~QI~~ 139 (778)
|++||++. ++.. .+.... . ... .. . . ...+ . +..+..
T Consensus 71 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (239)
T PF01636_consen 71 YLLMEYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEE 150 (239)
T ss_dssp EEEEEEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred eEEEEEeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHH
Confidence 99999983 3433 111110 0 000 00 0 0 0000 0 111222
Q ss_pred -HHHHHH------cCCCccccccCCCCeEEc-CCCcEEEEecccccc
Q 004025 140 -AVSFLN------NDCKLVHGNVCLSSVVVT-QTLDWKLHAFDVLSE 178 (778)
Q Consensus 140 -aL~fLH------~~~~ivH~dLkp~NI~v~-~~g~~KL~dFgla~~ 178 (778)
.+..++ ....++|||+++.||+++ ++|.+-|+||+.+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 151 RLLQELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp HHHHHHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred HHHHHHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence 233333 235699999999999999 667778999987653
|
; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B .... |
| >PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0081 Score=74.88 Aligned_cols=134 Identities=17% Similarity=0.187 Sum_probs=98.4
Q ss_pred hHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHHH
Q 004025 373 VLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLL 452 (778)
Q Consensus 373 i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~LL 452 (778)
.++.|+..+.++|..||...++.|..+. ...++|.|...+.|.++.||..++.++..+...+....
T Consensus 622 ~~~~L~~~L~D~d~~VR~~Av~~L~~~~--------~~~~~~~L~~aL~D~d~~VR~~Aa~aL~~l~~~~~~~~------ 687 (897)
T PRK13800 622 SVAELAPYLADPDPGVRRTAVAVLTETT--------PPGFGPALVAALGDGAAAVRRAAAEGLRELVEVLPPAP------ 687 (897)
T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHhhhc--------chhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCchH------
Confidence 4567888889999999999998887764 23467888999999999999999999987765443321
Q ss_pred HHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhhheeee--cc------------CCH
Q 004025 453 KYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL--SY------------LNC 518 (778)
Q Consensus 453 ~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~l~a--~~------------~~~ 518 (778)
.|..+..|+++.||...+-.|+++... . ...|. ++|+|+.+..|.+|+.+ .. .+.
T Consensus 688 -~L~~~L~~~d~~VR~~A~~aL~~~~~~----~-----~~~l~-~~L~D~d~~VR~~Av~aL~~~~~~~~l~~~l~D~~~ 756 (897)
T PRK13800 688 -ALRDHLGSPDPVVRAAALDVLRALRAG----D-----AALFA-AALGDPDHRVRIEAVRALVSVDDVESVAGAATDENR 756 (897)
T ss_pred -HHHHHhcCCCHHHHHHHHHHHHhhccC----C-----HHHHH-HHhcCCCHHHHHHHHHHHhcccCcHHHHHHhcCCCH
Confidence 222233467788888888888886521 1 23456 78888888888888888 11 778
Q ss_pred HHHHHHHHHHHHH
Q 004025 519 DVRSKAFQAVDQF 531 (778)
Q Consensus 519 ~VR~~a~~~~~~~ 531 (778)
.||..|-+.|-..
T Consensus 757 ~VR~~aa~aL~~~ 769 (897)
T PRK13800 757 EVRIAVAKGLATL 769 (897)
T ss_pred HHHHHHHHHHHHh
Confidence 8888888777554
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0044 Score=75.11 Aligned_cols=107 Identities=21% Similarity=0.206 Sum_probs=97.4
Q ss_pred hHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHHH
Q 004025 373 VLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLL 452 (778)
Q Consensus 373 i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~LL 452 (778)
|-..++.|.+.++.-||.+||+++-.+..++.++--||-|++|+++-+.|.+..+|-+-..+|..++-.+..+.+.+.||
T Consensus 579 V~~~v~sLlsd~~~~Vkr~Lle~i~~LC~FFGk~ksND~iLshLiTfLNDkDw~LR~aFfdsI~gvsi~VG~rs~seyll 658 (1431)
T KOG1240|consen 579 VEQMVSSLLSDSPPIVKRALLESIIPLCVFFGKEKSNDVILSHLITFLNDKDWRLRGAFFDSIVGVSIFVGWRSVSEYLL 658 (1431)
T ss_pred HHHHHHHHHcCCchHHHHHHHHHHHHHHHHhhhcccccchHHHHHHHhcCccHHHHHHHHhhccceEEEEeeeeHHHHHH
Confidence 34455667788889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCcchhhHHHHHHHhhh
Q 004025 453 KYLSKLQVDEEPAIRTNTTILLGNIAS 479 (778)
Q Consensus 453 ~~laklq~D~~~~IRtnt~icl~kIa~ 479 (778)
|+|..-.+|.+..|=.+++=||.-+.+
T Consensus 659 PLl~Q~ltD~EE~Viv~aL~~ls~Lik 685 (1431)
T KOG1240|consen 659 PLLQQGLTDGEEAVIVSALGSLSILIK 685 (1431)
T ss_pred HHHHHhccCcchhhHHHHHHHHHHHHH
Confidence 999999999999998888887765543
|
|
| >PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.012 Score=73.25 Aligned_cols=133 Identities=15% Similarity=0.173 Sum_probs=95.5
Q ss_pred hhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHH
Q 004025 371 VKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGS 450 (778)
Q Consensus 371 ~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~ 450 (778)
..++|.|++++.++|..||...+.-|-.+.+.++.. +.+...+.|.++.||...+.++..+-.- .
T Consensus 651 ~~~~~~L~~aL~D~d~~VR~~Aa~aL~~l~~~~~~~-------~~L~~~L~~~d~~VR~~A~~aL~~~~~~----~---- 715 (897)
T PRK13800 651 PGFGPALVAALGDGAAAVRRAAAEGLRELVEVLPPA-------PALRDHLGSPDPVVRAAALDVLRALRAG----D---- 715 (897)
T ss_pred hhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCch-------HHHHHHhcCCCHHHHHHHHHHHHhhccC----C----
Confidence 346788999999999999999998888776655432 4566677888999999988887665311 1
Q ss_pred HHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhhheeee--c--------c-----
Q 004025 451 LLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL--S--------Y----- 515 (778)
Q Consensus 451 LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~l~a--~--------~----- 515 (778)
...|.++..|+++.||..++..|++|.. ..++. .++.|+.+..|.++..+ . .
T Consensus 716 -~~~l~~~L~D~d~~VR~~Av~aL~~~~~-----------~~~l~-~~l~D~~~~VR~~aa~aL~~~~~~~~~~~~~L~~ 782 (897)
T PRK13800 716 -AALFAAALGDPDHRVRIEAVRALVSVDD-----------VESVA-GAATDENREVRIAVAKGLATLGAGGAPAGDAVRA 782 (897)
T ss_pred -HHHHHHHhcCCCHHHHHHHHHHHhcccC-----------cHHHH-HHhcCCCHHHHHHHHHHHHHhccccchhHHHHHH
Confidence 1234445578899999999999988632 12344 67888888888887776 0 0
Q ss_pred ----CCHHHHHHHHHHHHHH
Q 004025 516 ----LNCDVRSKAFQAVDQF 531 (778)
Q Consensus 516 ----~~~~VR~~a~~~~~~~ 531 (778)
++..||..|...|-.+
T Consensus 783 ll~D~d~~VR~aA~~aLg~~ 802 (897)
T PRK13800 783 LTGDPDPLVRAAALAALAEL 802 (897)
T ss_pred HhcCCCHHHHHHHHHHHHhc
Confidence 6778888887777554
|
|
| >cd00020 ARM Armadillo/beta-catenin-like repeats | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.008 Score=54.68 Aligned_cols=108 Identities=19% Similarity=0.184 Sum_probs=86.5
Q ss_pred hhhHHHHHHhhcCChHHHHHHHHHhHHHHHhh---cChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCCh---
Q 004025 371 VKVLPTIVKLFASNDRAIRVALLQHIDQYGQS---FSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQ--- 444 (778)
Q Consensus 371 ~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~---l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~--- 444 (778)
..++|.+++++...+..+|...+.-|..+... .....+...++|.++..+.|.++.+|+.++.++-.++..-..
T Consensus 6 ~~~i~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~ 85 (120)
T cd00020 6 AGGLPALVSLLSSSDENVQREAAWALSNLSAGNNDNIQAVVEAGGLPALVQLLKSEDEEVVKAALWALRNLAAGPEDNKL 85 (120)
T ss_pred cCChHHHHHHHHcCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCChHHHHHHHhCCCHHHHHHHHHHHHHHccCcHHHHH
Confidence 44788888888888888887777777666654 444556668999999999999999999999999999865532
Q ss_pred hhHhHHHHHHHHhhccCCCCcchhhHHHHHHHhh
Q 004025 445 RTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIA 478 (778)
Q Consensus 445 ~~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa 478 (778)
..++..+++.|.++..+.+..+|-..+-+|..|+
T Consensus 86 ~~~~~g~l~~l~~~l~~~~~~~~~~a~~~l~~l~ 119 (120)
T cd00020 86 IVLEAGGVPKLVNLLDSSNEDIQKNATGALSNLA 119 (120)
T ss_pred HHHHCCChHHHHHHHhcCCHHHHHHHHHHHHHhh
Confidence 2234568999999988888999999999998876
|
An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, the junctional plaque protein plakoglobin, the adenomatous polyposis coli (APC) tumor suppressor protein, and a number of other proteins. ARM has been implicated in mediating protein-protein interactions, but no common features among the target proteins recognized by the ARM repeats have been identified; related to the HEAT domain; three consecutive copies of the repeat are represented by this alignment model. |
| >KOG1820 consensus Microtubule-associated protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.027 Score=68.17 Aligned_cols=190 Identities=14% Similarity=0.122 Sum_probs=136.8
Q ss_pred HhhhcccCChhhHhHhhhhchhhhcCCC--hhhhhhchHHHHHHHHhhCCCCch---hhHHHHHhccCCCh--hhhhhhh
Q 004025 301 FMEILNLKDSVEKDTFFRKLPNLAEQLP--RQIVLKKLLPLLASALEFGSAAAP---ALTALLKMGSWLST--EEFSVKV 373 (778)
Q Consensus 301 ~Le~l~~k~~~EK~~F~~~L~~~l~~fp--~~~~~~kILP~Ll~~~~~~~~~~~---~L~~llki~~~l~~--eef~~~i 373 (778)
+..++.-++-.++.+-+..+..++++=. ..-...-++-.+++.......... .+..+-.|+..|.. ..|...+
T Consensus 258 l~t~~~s~~WK~R~Eale~l~~~l~e~~~~~~~~~~~ll~~~~ki~~kDaN~~v~~~aa~~l~~ia~~lr~~~~~~~~~v 337 (815)
T KOG1820|consen 258 LETEMLSKKWKDRKEALEELVAILEEAKKEIVKGYTGLLGILLKIRLKDANINVVMLAAQILELIAKKLRPLFRKYAKNV 337 (815)
T ss_pred HHHhhhccchHHHHHHHHHHHHHHhccccccccCcchHHHHHHHHhccCcchhHHHHHHHHHHHHHHhcchhhHHHHHhh
Confidence 3444555666677777777766666544 111122234444444444332222 22333355555544 5688889
Q ss_pred HHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCC----hhhHhH
Q 004025 374 LPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLS----QRTISG 449 (778)
Q Consensus 374 ~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~----~~~l~~ 449 (778)
.|.|+.-|...-..+|=+|+.-++.+.. ....+.+++.+..++.+.+|.+|.+|..-+-....+++ ++....
T Consensus 338 ~p~lld~lkekk~~l~d~l~~~~d~~~n----s~~l~~~~~~I~e~lk~knp~~k~~~~~~l~r~~~~~~~~~~~~~t~~ 413 (815)
T KOG1820|consen 338 FPSLLDRLKEKKSELRDALLKALDAILN----STPLSKMSEAILEALKGKNPQIKGECLLLLDRKLRKLGPKTVEKETVK 413 (815)
T ss_pred cchHHHHhhhccHHHHHHHHHHHHHHHh----cccHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHhhcCCcCcchhhHH
Confidence 9999999998888999999999988888 44556788999999999999999999988887777777 344567
Q ss_pred HHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHHHH
Q 004025 450 SLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAF 494 (778)
Q Consensus 450 ~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af 494 (778)
.+.|++.+..+|.+..||.++.-|++-|...++.+.-++.|...+
T Consensus 414 ~l~p~~~~~~~D~~~~VR~Aa~e~~~~v~k~~Ge~~~~k~L~~~~ 458 (815)
T KOG1820|consen 414 TLVPHLIKHINDTDKDVRKAALEAVAAVMKVHGEEVFKKLLKDLD 458 (815)
T ss_pred HHhHHHhhhccCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhc
Confidence 899999999999999999999999999999999877555544444
|
|
| >PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.0069 Score=54.23 Aligned_cols=66 Identities=14% Similarity=0.278 Sum_probs=52.9
Q ss_pred hhhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhh--hhcchHHHHhhcCCCcHHHHHHH
Q 004025 366 TEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVV--DEQVYPHVATGFADTSAFLREMT 431 (778)
Q Consensus 366 ~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v--~~~I~P~l~~gf~Dt~~~iRe~t 431 (778)
.++|...|+|.|+.+|.++|..||+..++.|-.+.+....+.+ -++||.-++..+.|+++.||..+
T Consensus 21 ~~~~l~~Il~pVL~~~~D~d~rVRy~AcEaL~ni~k~~~~~~l~~f~~IF~~L~kl~~D~d~~Vr~~a 88 (97)
T PF12755_consen 21 ISKYLDEILPPVLKCFDDQDSRVRYYACEALYNISKVARGEILPYFNEIFDALCKLSADPDENVRSAA 88 (97)
T ss_pred HHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHH
Confidence 6778888999999999999999999999999888887776654 24577777777788877777653
|
|
| >PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C) | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.0044 Score=62.55 Aligned_cols=99 Identities=18% Similarity=0.026 Sum_probs=70.0
Q ss_pred HHHHHHHhcCCC-CCeeeEeeeeEecccccCCcccEEEEEecCCcC--hHH---HHHHhCcCCCcchHHHHHHHHHHHHH
Q 004025 67 RNGVKRLRTVRH-PNILAFLHSTEVENIDATSTKITIYIVTEPVMP--LSE---KIKELGLEGSQRDEYYAWGLNQIAKA 140 (778)
Q Consensus 67 ~~ev~~Lk~LrH-PnIlk~~d~~e~e~~~g~~~~~~lyIVtE~v~~--L~~---~L~~~~~~~~~~~~~i~~gl~QI~~a 140 (778)
.+|.-.|+.+.+ +++.++++++-. ++|+||++. +.. .+..... ........+..|+++.
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG~------------~~v~E~~~~~~~~~~~~~l~~~~~---~~w~~R~~iA~~lL~~ 71 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCGR------------FYVVEYVGAGSLYGIYRPLSQFLQ---SPWEQRAKIALQLLEL 71 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECCC------------EEEEEeecCccccccccccccccc---cCHHHHHHHHHHHHHH
Confidence 467888888876 699999999842 669999963 321 1111111 1122233447889999
Q ss_pred HHHHHcC--CCccccccCCCCeEEcCCCcEEEEecccccccC
Q 004025 141 VSFLNND--CKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (778)
Q Consensus 141 L~fLH~~--~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~ 180 (778)
+.+|++. ..+..+|++++|+-|+++|++|+.|.+.+....
T Consensus 72 l~~l~~~~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~~ 113 (188)
T PF12260_consen 72 LEELDHGPLGFFYLCDVSPDNFGVNDDGRLKLIDLDDVFVED 113 (188)
T ss_pred HHHHhcCCCCcEEEeecchHHeEEeCCCcEEEEechhcchhH
Confidence 9998851 247778999999999999999999999876553
|
Proteins in this uncharacterised family are described as transmembrane proteins. |
| >PRK09550 mtnK methylthioribose kinase; Reviewed | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.028 Score=63.22 Aligned_cols=75 Identities=15% Similarity=0.034 Sum_probs=47.1
Q ss_pred cCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCC----C-chhHHHHHHHHHHHHhcCC---CCCeeeEeeeeEeccccc
Q 004025 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTN----A-QDGHLAAARNGVKRLRTVR---HPNILAFLHSTEVENIDA 95 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~----~-~~~~~~~~~~ev~~Lk~Lr---HPnIlk~~d~~e~e~~~g 95 (778)
+.++.|. + .||+++....++.|.||.-.... . .....++...|.+.|+.+. -..+.+++.+-++
T Consensus 32 ~elggGn~N--~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~~----- 104 (401)
T PRK09550 32 REIGDGNLN--LVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYDEE----- 104 (401)
T ss_pred eEcCCCceE--EEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEECCC-----
Confidence 4566666 5 79999876433589999854110 1 0123456677777788763 2356777766432
Q ss_pred CCcccEEEEEecCCcC
Q 004025 96 TSTKITIYIVTEPVMP 111 (778)
Q Consensus 96 ~~~~~~lyIVtE~v~~ 111 (778)
.-++|||++.+
T Consensus 105 -----~~~lVME~L~~ 115 (401)
T PRK09550 105 -----LAVTVMEDLSD 115 (401)
T ss_pred -----CCEEEEecCCC
Confidence 46899999853
|
|
| >COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.015 Score=57.45 Aligned_cols=131 Identities=14% Similarity=0.090 Sum_probs=86.6
Q ss_pred Cceec--cCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 20 PYNIG--DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 20 ~Y~i~--~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
.|.+. +.++.|+ | .||.|..+ |..+++|+-... .....+..|.++|..+.--++-.=+-.+-
T Consensus 21 ~~~~~v~~~L~KG~~s--~Vyl~~~~--~~~~a~Kvrr~d----s~r~~l~kEakiLeil~g~~~~p~vy~yg------- 85 (201)
T COG2112 21 KYELRVEKELAKGTTS--VVYLGEWR--GGEVALKVRRRD----SPRRNLEKEAKILEILAGEGVTPEVYFYG------- 85 (201)
T ss_pred chhhhhhhhhhccccc--EEEEeecc--CceEEEEEecCC----cchhhHHHHHHHHHHhhhcCCCceEEEec-------
Confidence 44443 4678888 7 89999986 679999985532 33556889999999998666544333332
Q ss_pred CcccEEEEEecCC-c-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccC-CCCeEEcCCCcEEEEec
Q 004025 97 STKITIYIVTEPV-M-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC-LSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 97 ~~~~~lyIVtE~v-~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLk-p~NI~v~~~g~~KL~dF 173 (778)
..+|+|||+ + +|...-... .... +..++++---|- ..+|-|+.|+ |..+++..++++.|+||
T Consensus 86 ----~~~i~me~i~G~~L~~~~~~~------~rk~----l~~vlE~a~~LD-~~GI~H~El~~~~k~vlv~~~~~~iIDF 150 (201)
T COG2112 86 ----EDFIRMEYIDGRPLGKLEIGG------DRKH----LLRVLEKAYKLD-RLGIEHGELSRPWKNVLVNDRDVYIIDF 150 (201)
T ss_pred ----hhhhhhhhhcCcchhhhhhcc------cHHH----HHHHHHHHHHHH-HhccchhhhcCCceeEEecCCcEEEEEc
Confidence 236679999 4 566543321 0111 455666633344 4799999998 55555555569999999
Q ss_pred ccccccC
Q 004025 174 DVLSEFD 180 (778)
Q Consensus 174 gla~~~~ 180 (778)
+-++...
T Consensus 151 d~At~k~ 157 (201)
T COG2112 151 DSATFKK 157 (201)
T ss_pred cchhhcc
Confidence 9988543
|
|
| >PF02985 HEAT: HEAT repeat; InterPro: IPR000357 The HEAT repeat is a tandemly repeated, 37-47 amino acid long module occurring in a number of cytoplasmic proteins, including the four name-giving proteins huntingtin, elongation factor 3 (EF3), the 65 Kd alpha regulatory subunit of protein phosphatase 2A (PP2A) and the yeast PI3-kinase TOR1 [] | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.0023 Score=44.54 Aligned_cols=31 Identities=39% Similarity=0.519 Sum_probs=25.5
Q ss_pred HHHHHHhhccCCCCcchhhHHHHHHHhhhhc
Q 004025 451 LLKYLSKLQVDEEPAIRTNTTILLGNIASHL 481 (778)
Q Consensus 451 LL~~laklq~D~~~~IRtnt~icl~kIa~~L 481 (778)
|||.|.++..|+++.||.+++.|||+|++++
T Consensus 1 llp~l~~~l~D~~~~VR~~a~~~l~~i~~~~ 31 (31)
T PF02985_consen 1 LLPILLQLLNDPSPEVRQAAAECLGAIAEHC 31 (31)
T ss_dssp HHHHHHHHHT-SSHHHHHHHHHHHHHHHHTS
T ss_pred CHHHHHHHcCCCCHHHHHHHHHHHHHHHhhC
Confidence 6788888888999999999999999888764
|
Arrays of HEAT repeats consists of 3 to 36 units forming a rod-like helical structure and appear to function as protein-protein interaction surfaces. It has been noted that many HEAT repeat-containing proteins are involved in intracellular transport processes. In the crystal structure of PP2A PR65/A [], the HEAT repeats consist of pairs of antiparallel alpha helices [].; GO: 0005515 protein binding; PDB: 3FGA_A 2PF4_C 2IAE_A 2BKU_D 3EA5_B 3ND2_A 2BPT_A 2NYL_A 2NPP_D 2PKG_B .... |
| >PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.056 Score=55.01 Aligned_cols=119 Identities=17% Similarity=0.220 Sum_probs=76.6
Q ss_pred cCCCCCCCceEEEEeEECCCCCcEEEEEEeCCC--------------CchhHHHHHHHHHHHHhcCC------CCCeeeE
Q 004025 25 DPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTN--------------AQDGHLAAARNGVKRLRTVR------HPNILAF 84 (778)
Q Consensus 25 ~~lg~g~g~w~Vy~g~~k~~g~~VaIK~~~~~~--------------~~~~~~~~~~~ev~~Lk~Lr------HPnIlk~ 84 (778)
..++.|+.- .+|. +. ++...+||+..... .........++|++....+. +..|.++
T Consensus 7 ~~i~~G~~R-~cy~--HP-~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~ 82 (199)
T PF10707_consen 7 DLIAQGGER-DCYQ--HP-DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF 82 (199)
T ss_pred cccccCCCc-eEEE--CC-CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence 356666521 4555 22 45667799987654 01112445666776666665 8889999
Q ss_pred eeeeEecccccCCcccEEEEEecCCc--------ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccC
Q 004025 85 LHSTEVENIDATSTKITIYIVTEPVM--------PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156 (778)
Q Consensus 85 ~d~~e~e~~~g~~~~~~lyIVtE~v~--------~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLk 156 (778)
++..+++- -+-+|+|.+. +|.+++++.... . .+ ...+-+-..||- +.+|+.+||+
T Consensus 83 ~G~veT~~--------G~Glv~e~I~d~dG~~s~TL~~~l~~~~~~----~-~~---~~~L~~f~~~l~-~~~Iv~~dl~ 145 (199)
T PF10707_consen 83 YGFVETNL--------GLGLVVELIRDADGNISPTLEDYLKEGGLT----E-EL---RQALDEFKRYLL-DHHIVIRDLN 145 (199)
T ss_pred eEEEecCC--------ceEEEEEEEECCCCCcCccHHHHHHcCCcc----H-HH---HHHHHHHHHHHH-HcCCeecCCC
Confidence 99999864 5688999882 388888665432 1 22 223333344555 4789999999
Q ss_pred CCCeEEcC
Q 004025 157 LSSVVVTQ 164 (778)
Q Consensus 157 p~NI~v~~ 164 (778)
|.||++..
T Consensus 146 ~~NIv~~~ 153 (199)
T PF10707_consen 146 PHNIVVQR 153 (199)
T ss_pred cccEEEEe
Confidence 99999963
|
PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner []. |
| >PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.027 Score=50.43 Aligned_cols=66 Identities=17% Similarity=0.327 Sum_probs=57.2
Q ss_pred hhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHh--HHHHHHHHhhccCCCCcchhhHHHH
Q 004025 408 VDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTIS--GSLLKYLSKLQVDEEPAIRTNTTIL 473 (778)
Q Consensus 408 v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~--~~LL~~laklq~D~~~~IRtnt~ic 473 (778)
.-+.|+|.++.+|.|.+..||..+..++..++.......+. ++++..|.|+..|+++.||.-+..+
T Consensus 24 ~l~~Il~pVL~~~~D~d~rVRy~AcEaL~ni~k~~~~~~l~~f~~IF~~L~kl~~D~d~~Vr~~a~~L 91 (97)
T PF12755_consen 24 YLDEILPPVLKCFDDQDSRVRYYACEALYNISKVARGEILPYFNEIFDALCKLSADPDENVRSAAELL 91 (97)
T ss_pred HHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHH
Confidence 44569999999999999999999999999999777766663 7889999999999999999876543
|
|
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.012 Score=72.15 Aligned_cols=200 Identities=17% Similarity=0.205 Sum_probs=123.9
Q ss_pred HHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHH
Q 004025 63 LAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKA 140 (778)
Q Consensus 63 ~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~a 140 (778)
.....-|+..+..++|+|+..++.+--.+-.. .-.+++..|+| .++...+...+.. ..+.......++.+|
T Consensus 226 i~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~----g~~~~v~~~~~s~~~~~~~~q~v~~i---~~~~~r~~~~~~~~G 298 (1351)
T KOG1035|consen 226 IQTTEIELESLSKIAHDNLGGYFVYGLERLFR----GIVLDVLQEICSKVELRSLLQSVGSI---PLETLRILHQKLLEG 298 (1351)
T ss_pred HHHHHHHHHHHHhhccccccceeEEeehhhcc----hHHHHHHHhhcCccchHHHHhhcccc---CHHHHHHHHHHHhhh
Confidence 33445677788889999999998877554322 12455667777 3577777665432 233344447899999
Q ss_pred HHHHHcCCCccccccCCC---CeEEcCCCcEEEE--ecccccccCCCCCCCCCCccccccccCCCCCCcccccccccccc
Q 004025 141 VSFLNNDCKLVHGNVCLS---SVVVTQTLDWKLH--AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVR 215 (778)
Q Consensus 141 L~fLH~~~~ivH~dLkp~---NI~v~~~g~~KL~--dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~ 215 (778)
|.++|. ..+.|.-+..+ ..-++..+....+ +|+....+.+.... ........+.++|......
T Consensus 299 L~~~h~-~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~-------~~~~~~~~~~~~e~~~~~~---- 366 (1351)
T KOG1035|consen 299 LAYLHS-LSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKS-------FSDLLAEIRNADEDLKENT---- 366 (1351)
T ss_pred HHHHHH-hccceeEEecccccccccCccceeecchhhhcccccCCCcccc-------hhhcCcccccccccccccc----
Confidence 999996 66666555554 3333445556666 77777766543221 1112233455666654321
Q ss_pred CCCCCcchhHHHHHHHHHHHhCCCCCChhhh-hcc--CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 216 KSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-RNT--ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 216 ~~~~~~~DiwSLG~liyel~tg~~p~~~~~l-~~~--~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.......|+|.+|.+...+..|..+...... ... ......+.....+|+..+++.|+++.+++.|+
T Consensus 367 ~~~~r~~dL~~lgll~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~ 435 (1351)
T KOG1035|consen 367 AKKSRLTDLWCLGLLLLQLSQGEDISEKSAVPVSLLDVLSTSELLDALPKCLDEDSEERLSALELLTHP 435 (1351)
T ss_pred chhhhhhHHHHHHHHHhhhhhcCcccccccchhhhhccccchhhhhhhhhhcchhhhhccchhhhhhch
Confidence 1122346999999999999988654322111 110 11122456667889989999999999999997
|
|
| >PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.047 Score=63.69 Aligned_cols=188 Identities=20% Similarity=0.236 Sum_probs=119.5
Q ss_pred ccCChhhHhHhhhhchhhhcCCChhhhhhchHHHHHHHHhhCCCCchhhHHHH-HhccCCChhhhhhhhHHHHHHhhcCC
Q 004025 306 NLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALL-KMGSWLSTEEFSVKVLPTIVKLFASN 384 (778)
Q Consensus 306 ~~k~~~EK~~F~~~L~~~l~~fp~~~~~~kILP~Ll~~~~~~~~~~~~L~~ll-ki~~~l~~eef~~~i~P~i~~lF~~~ 384 (778)
...++.-+...++-|......-+....+..+++.+...+... ...++.-.. .+.......+....+++.+.+++.++
T Consensus 202 ~~~~~~~q~~il~~l~~~~~~~~~~~~~~~~i~~l~~~l~s~--~~~V~~e~~~~i~~l~~~~~~~~~~~~~L~~lL~s~ 279 (526)
T PF01602_consen 202 SDPDPWLQIKILRLLRRYAPMEPEDADKNRIIEPLLNLLQSS--SPSVVYEAIRLIIKLSPSPELLQKAINPLIKLLSSS 279 (526)
T ss_dssp TCCSHHHHHHHHHHHTTSTSSSHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHTSS
T ss_pred cccchHHHHHHHHHHHhcccCChhhhhHHHHHHHHHHHhhcc--ccHHHHHHHHHHHHhhcchHHHHhhHHHHHHHhhcc
Confidence 455555555555555444433333332245666666665522 122222212 22222233446788999999999999
Q ss_pred hHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHHHHHHHhhccCCCC
Q 004025 385 DRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEP 464 (778)
Q Consensus 385 Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~LL~~laklq~D~~~ 464 (778)
|..+|+..|+.|..++.+-++.. . .....+.....|.+..||...+..+..++..=+-..+-++|+.++..+ .++
T Consensus 280 ~~nvr~~~L~~L~~l~~~~~~~v-~-~~~~~~~~l~~~~d~~Ir~~~l~lL~~l~~~~n~~~Il~eL~~~l~~~---~d~ 354 (526)
T PF01602_consen 280 DPNVRYIALDSLSQLAQSNPPAV-F-NQSLILFFLLYDDDPSIRKKALDLLYKLANESNVKEILDELLKYLSEL---SDP 354 (526)
T ss_dssp SHHHHHHHHHHHHHHCCHCHHHH-G-THHHHHHHHHCSSSHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHC-----H
T ss_pred cchhehhHHHHHHHhhcccchhh-h-hhhhhhheecCCCChhHHHHHHHHHhhcccccchhhHHHHHHHHHHhc---cch
Confidence 99999999999999998874443 3 344445555558889999999999999998777777788888887322 245
Q ss_pred cchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCC
Q 004025 465 AIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTF 503 (778)
Q Consensus 465 ~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f 503 (778)
.+|-..+..|++|+...... ..-.+..+. +.++..-
T Consensus 355 ~~~~~~i~~I~~la~~~~~~--~~~~v~~l~-~ll~~~~ 390 (526)
T PF01602_consen 355 DFRRELIKAIGDLAEKFPPD--AEWYVDTLL-KLLEISG 390 (526)
T ss_dssp HHHHHHHHHHHHHHHHHGSS--HHHHHHHHH-HHHHCTG
T ss_pred hhhhhHHHHHHHHHhccCch--HHHHHHHHH-Hhhhhcc
Confidence 69999999999999888542 223344455 5555433
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. Clathrin coats contain both clathrin and adaptor complexes that link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. The two major types of clathrin adaptor complexes are the heterotetrameric adaptor protein (AP) complexes, and the monomeric GGA (Golgi-localising, Gamma-adaptin ear domain homology, ARF-binding proteins) adaptors []. All AP complexes are heterotetramers composed of two large subunits (adaptins), a medium subunit (mu) and a small subunit (sigma). Each subunit has a specific function. Adaptin subunits recognise and bind to clathrin through their hinge region (clathrin box), and recruit accessory proteins that modulate AP function through their C-terminal appendage domains. By contrast, GGAs are monomers composed of four domains, which have functions similar to AP subunits: an N-terminal VHS (Vps27p/Hrs/Stam) domain, a GAT (GGA and Tom1) domain, a hinge region, and a C-terminal GAE (gamma-adaptin ear) domain. The GAE domain is similar to the AP gamma-adaptin ear domain, being responsible for the recruitment of accessory proteins that regulate clathrin-mediated endocytosis []. While clathrin mediates endocytic protein transport from ER to Golgi, coatomers (COPI, COPII) primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the N-terminal domain of various adaptins from different AP clathrin adaptor complexes (including AP1, AP2, AP3 and AP4), and from the beta and gamma subunits of various coatomer (COP) adaptors. This domain has a 2-layer alpha/alpha fold that forms a right-handed superhelix, and is a member of the ARM repeat superfamily []. The N-terminal region of the various AP adaptor proteins share strong sequence identity; by contrast, the C-terminal domains of different adaptins share similar structural folds, but have little sequence identity []. It has been proposed that the N-terminal domain interacts with another uniform component of the coated vesicles. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 1W63_C 2JKR_A 2JKT_A 2XA7_A 2VGL_B 3TJZ_E. |
| >PTZ00429 beta-adaptin; Provisional | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.1 Score=63.15 Aligned_cols=184 Identities=15% Similarity=0.125 Sum_probs=119.7
Q ss_pred cccccchh-hhhhHHhhhcccCChhhHhHhhhhchhhhcCCChhhhhhchHHHHHHHHhhCCCCchhhHHH--HHhccCC
Q 004025 288 TEYFQNKL-VDTIHFMEILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTAL--LKMGSWL 364 (778)
Q Consensus 288 ~~ff~n~l-v~~~~~Le~l~~k~~~EK~~F~~~L~~~l~~fp~~~~~~kILP~Ll~~~~~~~~~~~~L~~l--lki~~~l 364 (778)
..||...- -+....-+++...+..+|..-++.+...+- .+.-...+.|..++.+...+.....|.-+ ..+++.-
T Consensus 23 ~~~f~~~~kge~~ELr~~L~s~~~~~kk~alKkvIa~mt---~G~DvS~LF~dVvk~~~S~d~elKKLvYLYL~~ya~~~ 99 (746)
T PTZ00429 23 SKYFAQTRRGEGAELQNDLNGTDSYRKKAAVKRIIANMT---MGRDVSYLFVDVVKLAPSTDLELKKLVYLYVLSTARLQ 99 (746)
T ss_pred cccccccccchHHHHHHHHHCCCHHHHHHHHHHHHHHHH---CCCCchHHHHHHHHHhCCCCHHHHHHHHHHHHHHcccC
Confidence 36774221 122333344556667777766666543321 12223345666666655443333333332 2333322
Q ss_pred ChhhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCCh
Q 004025 365 STEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQ 444 (778)
Q Consensus 365 ~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~ 444 (778)
.|-.-.++..+.+-+.++++-||-..|..|.. +.-..+-+.+.+.+..++.|.+|.||..++-++..+...-.+
T Consensus 100 --pelalLaINtl~KDl~d~Np~IRaLALRtLs~----Ir~~~i~e~l~~~lkk~L~D~~pYVRKtAalai~Kly~~~pe 173 (746)
T PTZ00429 100 --PEKALLAVNTFLQDTTNSSPVVRALAVRTMMC----IRVSSVLEYTLEPLRRAVADPDPYVRKTAAMGLGKLFHDDMQ 173 (746)
T ss_pred --hHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHc----CCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhhCcc
Confidence 23334567888888899999999888875544 444556677899999999999999999999999988754443
Q ss_pred hhHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhh
Q 004025 445 RTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASH 480 (778)
Q Consensus 445 ~~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~ 480 (778)
......+++.|.++..|.++.|..|++..|..|...
T Consensus 174 lv~~~~~~~~L~~LL~D~dp~Vv~nAl~aL~eI~~~ 209 (746)
T PTZ00429 174 LFYQQDFKKDLVELLNDNNPVVASNAAAIVCEVNDY 209 (746)
T ss_pred cccccchHHHHHHHhcCCCccHHHHHHHHHHHHHHh
Confidence 333446777888888899999999999988888643
|
|
| >PF13646 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2IAE_A 3B2A_A | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.026 Score=48.80 Aligned_cols=86 Identities=16% Similarity=0.344 Sum_probs=63.8
Q ss_pred HHHHHHhh-cCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHHH
Q 004025 374 LPTIVKLF-ASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLL 452 (778)
Q Consensus 374 ~P~i~~lF-~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~LL 452 (778)
+|.+++.+ .+++..+|...+..|. .+... ++.|.+...+.|.++.||.+++.++-.+- ..+.+
T Consensus 1 i~~L~~~l~~~~~~~vr~~a~~~L~----~~~~~----~~~~~L~~~l~d~~~~vr~~a~~aL~~i~--------~~~~~ 64 (88)
T PF13646_consen 1 IPALLQLLQNDPDPQVRAEAARALG----ELGDP----EAIPALIELLKDEDPMVRRAAARALGRIG--------DPEAI 64 (88)
T ss_dssp HHHHHHHHHTSSSHHHHHHHHHHHH----CCTHH----HHHHHHHHHHTSSSHHHHHHHHHHHHCCH--------HHHTH
T ss_pred CHHHHHHHhcCCCHHHHHHHHHHHH----HcCCH----hHHHHHHHHHcCCCHHHHHHHHHHHHHhC--------CHHHH
Confidence 46777776 8899999988877666 33322 56899999999999999999999998652 34566
Q ss_pred HHHHhhcc-CCCCcchhhHHHHHH
Q 004025 453 KYLSKLQV-DEEPAIRTNTTILLG 475 (778)
Q Consensus 453 ~~laklq~-D~~~~IRtnt~icl~ 475 (778)
+.|.++.. |++..||..++-.||
T Consensus 65 ~~L~~~l~~~~~~~vr~~a~~aL~ 88 (88)
T PF13646_consen 65 PALIKLLQDDDDEVVREAAAEALG 88 (88)
T ss_dssp HHHHHHHTC-SSHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCcHHHHHHHHhhcC
Confidence 77777544 456677988877765
|
|
| >cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.044 Score=57.06 Aligned_cols=31 Identities=16% Similarity=0.179 Sum_probs=25.6
Q ss_pred CCccccccCCCCeEEcCCCcEEEEecccccc
Q 004025 148 CKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (778)
Q Consensus 148 ~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~ 178 (778)
..++|||+++.||+++.++..-|+||+.+..
T Consensus 164 ~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~ 194 (235)
T cd05155 164 PVWFHGDLAPGNLLVQDGRLSAVIDFGCLGV 194 (235)
T ss_pred ceEEeCCCCCCcEEEECCCEEEEEeCcccCc
Confidence 3489999999999998765557999998654
|
The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista |
| >PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.073 Score=62.07 Aligned_cols=153 Identities=18% Similarity=0.203 Sum_probs=116.3
Q ss_pred HhccCCChhhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcCh---hhhhhcchHHHHhhcCCCcHHHHHHHHHHH
Q 004025 359 KMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSA---QVVDEQVYPHVATGFADTSAFLREMTLKSM 435 (778)
Q Consensus 359 ki~~~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~---~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi 435 (778)
++-..+..++-...+.+.+...+..++..||...|..+..++.+-+. -..++.|++.++.++.|.+..|.+.+++.+
T Consensus 64 ~~l~~~~~~~l~~~~~~~L~~gL~h~~~~Vr~l~l~~l~~~~~~~~~~~~~~~~~~l~~~i~~~L~~~d~~Va~~A~~~L 143 (503)
T PF10508_consen 64 RLLSALSPDSLLPQYQPFLQRGLTHPSPKVRRLALKQLGRIARHSEGAAQLLVDNELLPLIIQCLRDPDLSVAKAAIKAL 143 (503)
T ss_pred HHHhccCHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCHHHHHHhcCccHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 44455666665777889999999999999999988888877755432 246678999999999999999999999999
Q ss_pred HhhhccCChh--hHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchh----hhHHHHHhhhhcCCCchhhhh
Q 004025 436 LVLAPKLSQR--TISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKR----VLINAFTVRALRDTFSPARGA 509 (778)
Q Consensus 436 ~~l~pkL~~~--~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~----vL~~af~~~~lkD~f~~~R~A 509 (778)
..++..-..- .+.+.++..|.++...+...||....-++.+|+.+=. +.... =|++.+. +.|++..+-.|+.
T Consensus 144 ~~l~~~~~~~~~l~~~~~~~~L~~l~~~~~~~vR~Rv~el~v~i~~~S~-~~~~~~~~sgll~~ll-~eL~~dDiLvqln 221 (503)
T PF10508_consen 144 KKLASHPEGLEQLFDSNLLSKLKSLMSQSSDIVRCRVYELLVEIASHSP-EAAEAVVNSGLLDLLL-KELDSDDILVQLN 221 (503)
T ss_pred HHHhCCchhHHHHhCcchHHHHHHHHhccCHHHHHHHHHHHHHHHhcCH-HHHHHHHhccHHHHHH-HHhcCccHHHHHH
Confidence 9998643222 1234447888887766677899999999999875532 22222 2677887 8999999999999
Q ss_pred eeee
Q 004025 510 AKIL 513 (778)
Q Consensus 510 ~l~a 513 (778)
++.-
T Consensus 222 alel 225 (503)
T PF10508_consen 222 ALEL 225 (503)
T ss_pred HHHH
Confidence 8875
|
26S proteasome non-ATPase regulatory subunit 5 is one of a number of chaperones that are involved in the assembly of the proteasome. The chaperones dissociate before 26S proteasome formation is complete [].; GO: 0044183 protein binding involved in protein folding |
| >TIGR01767 MTRK 5-methylthioribose kinase | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.057 Score=59.71 Aligned_cols=74 Identities=12% Similarity=-0.010 Sum_probs=45.1
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCC-----CCchhHHHHHHHHHHHHhcCC--CC-CeeeEeeeeEecccccC
Q 004025 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGT-----NAQDGHLAAARNGVKRLRTVR--HP-NILAFLHSTEVENIDAT 96 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~-----~~~~~~~~~~~~ev~~Lk~Lr--HP-nIlk~~d~~e~e~~~g~ 96 (778)
++|.|. . .||++.....++.|.||.-... ....-..++.+-|...|+... -| .+.+++.+-++
T Consensus 2 EigdGnlN--~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~D~e------ 73 (370)
T TIGR01767 2 EVGDGNLN--LVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHFDTE------ 73 (370)
T ss_pred cCCCCceE--EEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEEccc------
Confidence 466666 5 6999987543468999975421 111233455667777777764 45 35555554332
Q ss_pred CcccEEEEEecCCcC
Q 004025 97 STKITIYIVTEPVMP 111 (778)
Q Consensus 97 ~~~~~lyIVtE~v~~ 111 (778)
...+|||++.+
T Consensus 74 ----~~~~vMEdL~~ 84 (370)
T TIGR01767 74 ----MAVTVMEDLSH 84 (370)
T ss_pred ----cceehHhhCcc
Confidence 56799999953
|
This enzyme is involved in the methionine salvage pathway in certain bacteria. |
| >PRK12396 5-methylribose kinase; Reviewed | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.038 Score=61.83 Aligned_cols=76 Identities=12% Similarity=-0.006 Sum_probs=48.0
Q ss_pred ccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCC----CCchhHHHHHHHHHHHHhcCC--CCC-eeeEeeeeEeccccc
Q 004025 24 GDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGT----NAQDGHLAAARNGVKRLRTVR--HPN-ILAFLHSTEVENIDA 95 (778)
Q Consensus 24 ~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~----~~~~~~~~~~~~ev~~Lk~Lr--HPn-Ilk~~d~~e~e~~~g 95 (778)
.++||.|. . -||++.....+..|.||.-... ....-..++.+-|...|+.+. -|. +.+++.+-++
T Consensus 34 ~~eigdGnlN--~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~D~e----- 106 (409)
T PRK12396 34 CKEIGDGNLN--YVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLFDSV----- 106 (409)
T ss_pred eeEcCCCceE--EEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEECcH-----
Confidence 34677776 5 6999987544567999965421 111234566777888888764 453 5556654332
Q ss_pred CCcccEEEEEecCCcC
Q 004025 96 TSTKITIYIVTEPVMP 111 (778)
Q Consensus 96 ~~~~~~lyIVtE~v~~ 111 (778)
...+|||++.+
T Consensus 107 -----~~~~vMEdL~~ 117 (409)
T PRK12396 107 -----MNCCVMEDLSD 117 (409)
T ss_pred -----HhhHHHHhCcc
Confidence 56789999843
|
|
| >KOG1967 consensus DNA repair/transcription protein Mms19 [Replication, recombination and repair; Transcription] | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.032 Score=66.40 Aligned_cols=138 Identities=20% Similarity=0.324 Sum_probs=110.9
Q ss_pred hhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhc---chHHHHhhcCCCcHHHHHHHHHHHHhhhcc--
Q 004025 367 EEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQ---VYPHVATGFADTSAFLREMTLKSMLVLAPK-- 441 (778)
Q Consensus 367 eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~---I~P~l~~gf~Dt~~~iRe~tlksi~~l~pk-- 441 (778)
+-|-..|+|.++..|...+-.+|-.+|.-|++.+.++|.+++-.+ ++|.+++++.=.+..+|-.|+..+..+..+
T Consensus 862 QRfF~~ivP~l~~~~~t~~~~~K~~yl~~LshVl~~vP~~vllp~~~~LlPLLLq~Ls~~D~~v~vstl~~i~~~l~~~~ 941 (1030)
T KOG1967|consen 862 QRFFCDIVPILVSKFETAPGSQKHNYLEALSHVLTNVPKQVLLPQFPMLLPLLLQALSMPDVIVRVSTLRTIPMLLTESE 941 (1030)
T ss_pred HHHHHhhHHHHHHHhccCCccchhHHHHHHHHHHhcCCHHhhccchhhHHHHHHHhcCCCccchhhhHhhhhhHHHHhcc
Confidence 556678999999999988889999999999999999999988765 699999999999999988887777655544
Q ss_pred -CChhhHhHHHHHHHHhhccCCC---CcchhhHHHHHHHhhhhcccc----cchhhhHHHHHhhhhcCCCchhh
Q 004025 442 -LSQRTISGSLLKYLSKLQVDEE---PAIRTNTTILLGNIASHLNEG----TRKRVLINAFTVRALRDTFSPAR 507 (778)
Q Consensus 442 -L~~~~l~~~LL~~laklq~D~~---~~IRtnt~icl~kIa~~L~~~----~~~~vL~~af~~~~lkD~f~~~R 507 (778)
|-... -..+.|++..+-.|.+ -.||--++-||+.|...+... .|..| +.|.. +.|-|+---.|
T Consensus 942 tL~t~~-~~Tlvp~lLsls~~~~n~~~~VR~~ALqcL~aL~~~~P~~~l~~fr~~V-l~al~-k~LdDkKRlVR 1012 (1030)
T KOG1967|consen 942 TLQTEH-LSTLVPYLLSLSSDNDNNMMVVREDALQCLNALTRRLPTKSLLSFRPLV-LRALI-KILDDKKRLVR 1012 (1030)
T ss_pred ccchHH-HhHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHhccCCCcccccccHHH-HHHhh-hccCcHHHHHH
Confidence 33344 3679999999999877 589999999999999977653 34444 66777 77888763333
|
|
| >KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.0041 Score=77.56 Aligned_cols=160 Identities=11% Similarity=-0.099 Sum_probs=107.1
Q ss_pred HHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHH-HHH
Q 004025 64 AAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQI-AKA 140 (778)
Q Consensus 64 ~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI-~~a 140 (778)
+....|..-++...|+++..+..-..... ....|++++|| +.+...|-+.........++...-.+|+ +.+
T Consensus 1274 emll~e~de~~~~~h~~~~~~p~rI~ps~------s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~ 1347 (2724)
T KOG1826|consen 1274 EMLLSERDELREAKHYLTEVDPLRIPPSE------STEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLN 1347 (2724)
T ss_pred HhhhhhhhhhhhhhceeeecccccCCCCC------ChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhc
Confidence 34445556677889999998887776443 34679999999 5677766543322223334444446666 777
Q ss_pred HHHHHcCCC----ccccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccC
Q 004025 141 VSFLNNDCK----LVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRK 216 (778)
Q Consensus 141 L~fLH~~~~----ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~ 216 (778)
..-+|...+ -+|+++++-|.+|..+-.+|++++|+.+....... . .-..++++.|+.+++... -
T Consensus 1348 ~~~~ls~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~s-f-----~Gl~l~sp~~v~qli~N~------i 1415 (2724)
T KOG1826|consen 1348 RNVILSLTNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVLS-F-----FGLELCSPIYVLQLIKNE------I 1415 (2724)
T ss_pred cchhhhcccCCccchhhhhhhhccceecCCcccccccccccccCchHh-h-----hhhhhCCHHHHHHHHHHH------H
Confidence 777665333 67899999999999999999999999883322100 0 001133335667776553 2
Q ss_pred CCCCcchhHHHHHHHHHHHhCCCCC
Q 004025 217 SPPWSIDSWGLGCLIYELFSGMRLS 241 (778)
Q Consensus 217 ~~~~~~DiwSLG~liyel~tg~~p~ 241 (778)
.++.+.|+|..||.+|+...|.++|
T Consensus 1416 k~t~rsdilr~s~~ly~rs~~n~~f 1440 (2724)
T KOG1826|consen 1416 KFTKRSDILRRSLSLYLRSDGNAYF 1440 (2724)
T ss_pred hhhhHHHHHHHHHHHHHHhcccHHH
Confidence 3445699999999999999987654
|
|
| >cd00020 ARM Armadillo/beta-catenin-like repeats | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.014 Score=53.02 Aligned_cols=100 Identities=12% Similarity=0.102 Sum_probs=74.8
Q ss_pred hhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhcc---CChhhHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhccc
Q 004025 407 VVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPK---LSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNE 483 (778)
Q Consensus 407 ~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pk---L~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~ 483 (778)
.+...++|.++.-+.+.++.+|+.++.++..++.. .....+..++++.|.++-.|.++.+|-+++.||+.|+..-..
T Consensus 3 ~~~~~~i~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~ 82 (120)
T cd00020 3 VIQAGGLPALVSLLSSSDENVQREAAWALSNLSAGNNDNIQAVVEAGGLPALVQLLKSEDEEVVKAALWALRNLAAGPED 82 (120)
T ss_pred HHHcCChHHHHHHHHcCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCChHHHHHHHhCCCHHHHHHHHHHHHHHccCcHH
Confidence 45567899999999999999999999999888843 333445558899999998999999999999999999976432
Q ss_pred cc---chhhhHHHHHhhhhcCCCchhh
Q 004025 484 GT---RKRVLINAFTVRALRDTFSPAR 507 (778)
Q Consensus 484 ~~---~~~vL~~af~~~~lkD~f~~~R 507 (778)
.. .+.-+++.+. +.|.+.....|
T Consensus 83 ~~~~~~~~g~l~~l~-~~l~~~~~~~~ 108 (120)
T cd00020 83 NKLIVLEAGGVPKLV-NLLDSSNEDIQ 108 (120)
T ss_pred HHHHHHHCCChHHHH-HHHhcCCHHHH
Confidence 11 1122466666 66666644333
|
An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, the junctional plaque protein plakoglobin, the adenomatous polyposis coli (APC) tumor suppressor protein, and a number of other proteins. ARM has been implicated in mediating protein-protein interactions, but no common features among the target proteins recognized by the ARM repeats have been identified; related to the HEAT domain; three consecutive copies of the repeat are represented by this alignment model. |
| >PLN02876 acyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.096 Score=64.86 Aligned_cols=77 Identities=10% Similarity=0.072 Sum_probs=45.6
Q ss_pred cCCCCCC-CceEEEEeEECCCC--CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCe--eeEeeeeEecccccCCc
Q 004025 25 DPYPSAW-GSWSHFQGTSKDDG--SPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNI--LAFLHSTEVENIDATST 98 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~g--~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnI--lk~~d~~e~e~~~g~~~ 98 (778)
+.++.|. + .+|.......+ ..+.+++....... .....+.+|++.|+.|. |++| .+++..+++....
T Consensus 44 ~~l~gG~sn--~ty~l~~~~~~~~~~~VLR~~p~~~~~-~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~---- 116 (822)
T PLN02876 44 SQFGHGQSN--PTFLLEVGNGGSVKRYVLRKKPPGKLL-QSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVI---- 116 (822)
T ss_pred EEeCCCCcC--ceEEEEECCCCcceeEEEEeCCCCccC-ccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcC----
Confidence 3455555 4 56665544322 35666665432111 12335789999999996 6664 7777666543211
Q ss_pred ccEEEEEecCC
Q 004025 99 KITIYIVTEPV 109 (778)
Q Consensus 99 ~~~lyIVtE~v 109 (778)
...|+||||+
T Consensus 117 -G~~flVME~v 126 (822)
T PLN02876 117 -GTAFYIMEYL 126 (822)
T ss_pred -CCceEEEEec
Confidence 2568999998
|
|
| >PLN02756 S-methyl-5-thioribose kinase | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.083 Score=59.44 Aligned_cols=33 Identities=27% Similarity=0.318 Sum_probs=26.7
Q ss_pred HHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 143 FLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 143 fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
|+.+...++||||.+.|||++.++ .+++|.+++
T Consensus 225 f~~~~~~L~HGDl~~g~i~~~~~~-~~~id~ef~ 257 (418)
T PLN02756 225 FCERAQALVHGDLHTGSVMVTPDS-TQVIDPEFA 257 (418)
T ss_pred HHhcccceeecCCCCCcEEEcCCC-ceEecchhh
Confidence 455545799999999999999876 888887764
|
|
| >TIGR02721 ycfN_thiK thiamine kinase | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.11 Score=54.79 Aligned_cols=29 Identities=28% Similarity=0.267 Sum_probs=26.0
Q ss_pred CccccccCCCCeEEcCCCcEEEEecccccc
Q 004025 149 KLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (778)
Q Consensus 149 ~ivH~dLkp~NI~v~~~g~~KL~dFgla~~ 178 (778)
.++|+|+.|.||+++.+| +.|+||+++..
T Consensus 147 ~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 147 APLHMDVHAYNLVVTPQG-LKLIDWEYASD 175 (256)
T ss_pred eeecCCCCcCcEEEeCCC-CEEEeccccCc
Confidence 589999999999999887 78999998764
|
Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function. |
| >PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2 | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.22 Score=50.76 Aligned_cols=134 Identities=13% Similarity=0.007 Sum_probs=86.0
Q ss_pred CCceeccCCCCCC--CceEEEEeEECCCCCcEEEEEEeC---CCCc---------h-------hHHHHHHHHH---HHHh
Q 004025 19 LPYNIGDPYPSAW--GSWSHFQGTSKDDGSPVSIFSISG---TNAQ---------D-------GHLAAARNGV---KRLR 74 (778)
Q Consensus 19 ~~Y~i~~~lg~g~--g~w~Vy~g~~k~~g~~VaIK~~~~---~~~~---------~-------~~~~~~~~ev---~~Lk 74 (778)
.++++.+.+|.|. | .||++.. +|..+|||++.. .... + ....-+.+|. .+|+
T Consensus 37 ~~I~flefLg~g~~~~--~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLk 112 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDG--YVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLK 112 (207)
T ss_pred CcEeeeeecCCCCcee--EEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHH
Confidence 3677888899887 5 7999887 588999999432 1100 0 1122344454 4566
Q ss_pred cCCCCCe--eeEeeeeEecc-c---------ccCCcccEEEEEecCCcChHHHHHHhCcCCCcchHHHHHHHHHHHHHHH
Q 004025 75 TVRHPNI--LAFLHSTEVEN-I---------DATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVS 142 (778)
Q Consensus 75 ~LrHPnI--lk~~d~~e~e~-~---------~g~~~~~~lyIVtE~v~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~ 142 (778)
.+.+.++ +++++++.-.. . ..........||.|++.+=. . ....- +.+|.+-|.
T Consensus 113 e~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~------~----~~~~~----~~~~~~dl~ 178 (207)
T PF13095_consen 113 EAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP------P----LQIRD----IPQMLRDLK 178 (207)
T ss_pred hccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc------c----cchhH----HHHHHHHHH
Confidence 6667777 89988884321 0 00011234568888874311 0 01111 788999999
Q ss_pred HHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 143 FLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 143 fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
.+| .++|+-+|+++.|.. +| ||+|||.+
T Consensus 179 ~~~-k~gI~~~Dv~~~ny~---~G--~lvDfs~~ 206 (207)
T PF13095_consen 179 ILH-KLGIVPRDVKPRNYR---GG--KLVDFSSS 206 (207)
T ss_pred HHH-HCCeeeccCcccccc---CC--EEEecccC
Confidence 999 599999999999986 33 88999853
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 778 | ||||
| 1zmw_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 2e-05 | ||
| 3d5u_A | 317 | Crystal Structure Of A Wildtype Polo-Like Kinase 1 | 3e-05 | ||
| 3d5w_A | 317 | Crystal Structure Of A Phosphorylated Polo-Like Kin | 3e-05 | ||
| 3d5v_A | 317 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 4e-05 | ||
| 3db6_A | 301 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 4e-05 | ||
| 1zmv_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 8e-05 | ||
| 1zmu_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 9e-05 | ||
| 2wzj_A | 327 | Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82 | 9e-05 | ||
| 2r0i_A | 327 | Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len | 9e-05 | ||
| 4bcf_A | 331 | Structure Of Cdk9 In Complex With Cyclin T And A 2- | 1e-04 | ||
| 4ec8_A | 373 | Structure Of Full Length Cdk9 In Complex With Cycli | 1e-04 | ||
| 3mi9_A | 351 | Crystal Structure Of Hiv-1 Tat Complexed With Human | 1e-04 | ||
| 3blh_A | 331 | Crystal Structure Of Human Cdk9CYCLINT1 Length = 33 | 2e-04 | ||
| 3iec_A | 319 | Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K | 3e-04 | ||
| 3fe3_A | 328 | Crystal Structure Of The Kinase Mark3PAR-1: T211a-S | 7e-04 |
| >pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327 | Back alignment and structure |
|
| >pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317 | Back alignment and structure |
|
| >pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317 | Back alignment and structure |
|
| >pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317 | Back alignment and structure |
|
| >pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301 | Back alignment and structure |
|
| >pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327 | Back alignment and structure |
|
| >pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327 | Back alignment and structure |
|
| >pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327 | Back alignment and structure |
|
| >pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327 | Back alignment and structure |
|
| >pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331 | Back alignment and structure |
|
| >pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373 | Back alignment and structure |
|
| >pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351 | Back alignment and structure |
|
| >pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331 | Back alignment and structure |
|
| >pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319 | Back alignment and structure |
|
| >pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 778 | |||
| 1b3u_A | 588 | Protein (protein phosphatase PP2A); scaffold prote | 2e-17 | |
| 1b3u_A | 588 | Protein (protein phosphatase PP2A); scaffold prote | 3e-14 | |
| 1b3u_A | 588 | Protein (protein phosphatase PP2A); scaffold prote | 2e-13 | |
| 1b3u_A | 588 | Protein (protein phosphatase PP2A); scaffold prote | 3e-12 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-15 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 3e-10 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 5e-10 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 5e-09 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 1e-08 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 1e-08 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 6e-08 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 2e-07 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 2e-07 | |
| 4apc_A | 350 | Serine/threonine-protein kinase NEK1; transferase; | 3e-07 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 1e-05 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 1e-04 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 6e-04 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 7e-04 | |
| 2jdq_A | 450 | Importin alpha-1 subunit; transport, PB2 subunit, | 9e-04 |
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 | Back alignment and structure |
|---|
Score = 85.1 bits (210), Expect = 2e-17
Identities = 41/229 (17%), Positives = 70/229 (30%), Gaps = 8/229 (3%)
Query: 301 FMEILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEF-GSAAAPALTALLK 359
++ L +D + +KL +A L + +LLP L + L
Sbjct: 15 LIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGT 74
Query: 360 MGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATG 419
+ + E+ +LP + L + +R ++ + S ++ P V
Sbjct: 75 FTTLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRAISHEHSPSDLEAHFVPLVKRL 134
Query: 420 FADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIAS 479
R V P++S + L +Y L D+ P +R LG A
Sbjct: 135 AGGDWFTSRTSACGLFSVCYPRVSSAVKA-ELRQYFRNLCSDDTPMVRRAAASKLGEFAK 193
Query: 480 HLNEGTRKRVLINAFTVRALRDTFSPARGAA-----KILSYLNCDVRSK 523
L K +I F D R A I L +
Sbjct: 194 VLELDNVKSEIIPMF-SNLASDEQDSVRLLAVEACVNIAQLLPQEDLEA 241
|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 | Back alignment and structure |
|---|
Score = 75.1 bits (184), Expect = 3e-14
Identities = 44/228 (19%), Positives = 83/228 (36%), Gaps = 6/228 (2%)
Query: 254 KSLLPDYQRLL-SSMPSRRLNSSKLIENSVGDFWMTEYFQNKLVDTIHFMEILNLKDSVE 312
+ LLP + L P RLN ++ + + Q L+ +E+
Sbjct: 362 EHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQ-SLLP--AIVELAEDAKWRV 418
Query: 313 KDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAA--APALTALLKMGSWLSTEEFS 370
+ +P LA QL + +KL L + L A A + L K+ E
Sbjct: 419 RLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAH 478
Query: 371 VKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREM 430
++P ++ + + R+ L I+ + + + + P V D A +R
Sbjct: 479 ATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMAGDPVANVRFN 538
Query: 431 TLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIA 478
KS+ + P L T+ + L KL D++ ++ L ++
Sbjct: 539 VAKSLQKIGPILDNSTLQSEVKPILEKLTQDQDVDVKYFAQEALTVLS 586
|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 | Back alignment and structure |
|---|
Score = 72.7 bits (178), Expect = 2e-13
Identities = 41/301 (13%), Positives = 92/301 (30%), Gaps = 20/301 (6%)
Query: 248 NTASIPKSLLPDYQRLLSSMPSR-RLNSSKLIENSVGDFWMTEYFQNKLVDTIHFMEILN 306
+ ++P ++ R R + E + LV F ++
Sbjct: 235 PQEDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVG-PEITKTDLVP--AFQNLMK 291
Query: 307 LKDSVEKDTFFRKLPNLAEQLP----RQIVLKKLLPLLASALEFGS-----AAAPALTAL 357
++ + K+ E L +++ ++LP + + + A A + L
Sbjct: 292 DCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSDANQHVKSALASVIMGL 351
Query: 358 LKMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVA 417
+ L + +LP + +R+ ++ ++D + + + + + P +
Sbjct: 352 SPI---LGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIV 408
Query: 418 TGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNI 477
D +R ++ M +LA +L L VD AIR T L +
Sbjct: 409 ELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKL 468
Query: 478 ASHLNEGTRKRVLINAFTVRALRDTFSPAR-GAAKILSYLNCDVRSKAFQAVDQFLQIVK 536
+ +I + D R ++ L+ L V
Sbjct: 469 VEKFGKEWAHATIIPKV-LAMSGDPNYLHRMTTLFCINVLSEVCGQDITT--KHMLPTVL 525
Query: 537 Q 537
+
Sbjct: 526 R 526
|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 | Back alignment and structure |
|---|
Score = 69.3 bits (169), Expect = 3e-12
Identities = 43/334 (12%), Positives = 97/334 (29%), Gaps = 61/334 (18%)
Query: 241 SKTEELRNTA--------------SIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFW 286
++ +LR + LLP + L ++ +
Sbjct: 21 NEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFTTLVG 80
Query: 287 MTEYFQNKLVDTIHFMEILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLL------ 340
EY L+ + + ++++V +D L ++ + + +PL+
Sbjct: 81 GPEYVH-CLLPPL--ESLATVEETVVRDKAVESLRAISHEHSPSDLEAHFVPLVKRLAGG 137
Query: 341 ------ASALEFGSAAAP----------------------------ALTALLKMGSWLST 366
SA S P A + L + L
Sbjct: 138 DWFTSRTSACGLFSVCYPRVSSAVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLEL 197
Query: 367 EEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAF 426
+ +++P L + ++R+ ++ Q + ++ V P + D S
Sbjct: 198 DNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKSWR 257
Query: 427 LREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTR 486
+R M L + L+ L D E +R + + +L+ R
Sbjct: 258 VRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCR 317
Query: 487 KRVLINAF---TVRALRDTFSPAR-GAAKILSYL 516
+ V+++ + D + A ++ L
Sbjct: 318 ENVIMSQILPCIKELVSDANQHVKSALASVIMGL 351
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 78.7 bits (193), Expect = 4e-15
Identities = 67/544 (12%), Positives = 153/544 (28%), Gaps = 165/544 (30%)
Query: 70 VKRLRTV-RHPNILAFLHSTEVENIDATSTKITIYIVT--EPVMPLSEKIKELGLEGSQR 126
+ ++T R P+++ ++ + + + + Y V+ +P + L + + EL R
Sbjct: 95 MSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLEL------R 148
Query: 127 DEYYAWGLNQIAKAVSFLNNDCKLVHGNV-CLSSVVVTQTLDWKLHAFDVLSEFDGNNEA 185
L+ G + + V ++ V + D
Sbjct: 149 PAKNV------------------LIDGVLGSGKTWVALDVCL----SYKVQCKMDFK--- 183
Query: 186 ANGPMLQYAWL-VGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE 244
WL + P + + L + + T
Sbjct: 184 -------IFWLNLKNCNSPETVLEMLQK---------------------LLYQIDPNWTS 215
Query: 245 ELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQNK---LVDT--- 298
++++I + L + S+ + L+ +V + F L+ T
Sbjct: 216 RSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFK 275
Query: 299 ----------------IHFMEILNLKDSVEKDTFFRKLPNL-AEQLPRQIVLKKLLPLLA 341
H L + K + + LPR++ P
Sbjct: 276 QVTDFLSAATTTHISLDHHSMTLTPDEVKS---LLLKYLDCRPQDLPREV--LTTNPRRL 330
Query: 342 SALEFGSAAAPALTALLK--MGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQY 399
S ++ + +W + + + L TI++ + +L+ +
Sbjct: 331 SI--IA--------ESIRDGLATWDNWKHVNCDKLTTIIESS--------LNVLEPAEYR 372
Query: 400 GQSFSAQVV---DEQVYPHV------ATGFADTSAFLREMTLKSMLVLAPKLSQRTISGS 450
+ F V + + +D + ++ S++ PK S +I
Sbjct: 373 -KMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSI 431
Query: 451 LLKYLSKLQVDEEPAIR--------------TNTTILLGN-------IASHLNEGTR--- 486
L+ K++++ E A+ ++ I I HL
Sbjct: 432 YLEL--KVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPER 489
Query: 487 ----KRVLIN-AFTVRALRDTFSPARGAAKILSYL------------NCDVRSKAFQAVD 529
+ V ++ F + +R + + IL+ L N + A+
Sbjct: 490 MTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAIL 549
Query: 530 QFLQ 533
FL
Sbjct: 550 DFLP 553
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 3e-10
Identities = 58/276 (21%), Positives = 97/276 (35%), Gaps = 49/276 (17%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNIL----AFLHSTEVEN 92
F+ +K D +I I N + VK L + HP I+ A+L E
Sbjct: 22 FEAKNKVDDCNYAIKRIRLPNREL-AREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEK 80
Query: 93 IDATSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYYAWG-LNQIAKAVSFLNNDCK 149
+ +S K+ +YI + L + + +R+ QIA+AV FL +
Sbjct: 81 LQPSSPKVYLYIQMQLCRKENLKDWMNGRC-TIEERERSVCLHIFLQIAEAVEFL-HSKG 138
Query: 150 LVH-----GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWL-----VG- 198
L+H N+ T K+ F +++ D + E A+ VG
Sbjct: 139 LMHRDLKPSNIFF-----TMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGT 193
Query: 199 AQYKPVELAKS---DWTAVRKSPPWSIDSWGLGCLIYEL----FSGMRLSKT-EELRN-- 248
Y E K D + LG +++EL + M +T ++RN
Sbjct: 194 KLYMSPEQIHGNSYSH----KV-----DIFSLGLILFELLYPFSTQMERVRTLTDVRNLK 244
Query: 249 TASIPKSLLPDYQRLLSSM----PSRRLNSSKLIEN 280
+ P ++ M P R + +IEN
Sbjct: 245 FPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 5e-10
Identities = 50/276 (18%), Positives = 91/276 (32%), Gaps = 44/276 (15%)
Query: 32 GSWSH-FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90
G +S+ DG ++ I QD A+ R HPNIL +
Sbjct: 40 GGFSYVDLVEGLHDGHFYALKRILCHEQQD--REEAQREADMHRLFNHPNILRLVAYC-- 95
Query: 91 ENIDATSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYYAWGL-NQIAKAVSFLNND 147
+ K +++ L +I+ L +G+ E L I + + + +
Sbjct: 96 --LRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAI-HA 152
Query: 148 CKLVH-----GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWL--VG-A 199
H N+ L L +++ + E + + W
Sbjct: 153 KGYAHRDLKPTNILL-----GDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTI 207
Query: 200 QYKPVELAKSDWTAVRKSPP-WSIDSWGLGCLIYEL------FSGMRL---SKTEELRNT 249
Y+ EL ++ D W LGC++Y + + + S ++N
Sbjct: 208 SYRAPEL----FSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQ 263
Query: 250 ASIPKSLL--PDYQRLLSSM----PSRRLNSSKLIE 279
SIP+S +LL+SM P +R + L+
Sbjct: 264 LSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLS 299
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 5e-09
Identities = 54/287 (18%), Positives = 93/287 (32%), Gaps = 60/287 (20%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
+ K DG + + + + + V LR ++HPNI+ +
Sbjct: 23 QKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDR----- 77
Query: 97 STKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYYAWG-LNQIAKAVSFL----NNDCK 149
T T+YIV E L+ I + E DE + + Q+ A+ +
Sbjct: 78 -TNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHT 136
Query: 150 LVH-----GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGA-QYKP 203
++H NV L + KL F + + + A VG Y
Sbjct: 137 VLHRDLKPANVFL-----DGKQNVKLGDFGLARILNHDTSFAKT-------FVGTPYYMS 184
Query: 204 VELAKS---DWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---------NTAS 251
E + KS D W LGCL+YEL + M +
Sbjct: 185 PEQMNRMSYNE----KS-----DIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR 235
Query: 252 IPKSLLPDYQRLLSSM----PSRRLNSSKLIENSVGDFWMTEYFQNK 294
IP + +++ M R + +++EN + E+ +
Sbjct: 236 IPYRYSDELNEIITRMLNLKDYHRPSVEEILENP----LILEHHHHH 278
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 1e-08
Identities = 51/276 (18%), Positives = 78/276 (28%), Gaps = 72/276 (26%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDA 95
F+ SK+DG ++ A V V +HP + + E I
Sbjct: 74 FKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGI-- 131
Query: 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWG-LNQIAKAVSFLNNDCKLVH- 152
+Y+ TE L + + G+ E WG L A++ L+ LVH
Sbjct: 132 ------LYLQTELCGPSLQQHCEA---WGASLPEAQVWGYLRDTLLALAHLH-SQGLVHL 181
Query: 153 ----GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVG---------- 198
N+ L KL F +L E G
Sbjct: 182 DVKPANIFL-----GPRGRCKLGDFGLLVELGTAGAGE--------VQEGDPRYMAPELL 228
Query: 199 -AQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL----SKTEELRNT---A 250
Y +D + LG I E+ M L ++LR
Sbjct: 229 QGSYGT----AADV-------------FSLGLTILEVACNMELPHGGEGWQQLRQGYLPP 271
Query: 251 SIPKSLLPDYQRLLSSM----PSRRLNSSKLIENSV 282
L + + +L M P R + L+ V
Sbjct: 272 EFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPV 307
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 1e-08
Identities = 53/307 (17%), Positives = 107/307 (34%), Gaps = 78/307 (25%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHS-----TEVE 91
+ + D +I I T + L+ + V L ++ H ++ + + V+
Sbjct: 23 VKARNALDSRYYAIKKIRHTEEK---LSTILSEVMLLASLNHQYVVRYYAAWLERRNFVK 79
Query: 92 NIDATSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGL-NQIAKAVSFLNNDC 148
+ A K T++I E L + I E + W L QI +A+S++ +
Sbjct: 80 PMTAVKKKSTLFIQMEYCENGTLYDLIHS---ENLNQQRDEYWRLFRQILEALSYI-HSQ 135
Query: 149 KLVH-------------GNVCLS----SVVVTQTLDWKLHAFDVLSEFDGNNEAANG-PM 190
++H NV + + V ++LD L N +A G M
Sbjct: 136 GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAM 195
Query: 191 LQYAWLVGA----QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYEL----FSGMRLSK 242
Y A K D +S LG + +E+ +GM +
Sbjct: 196 --YV----ATEVLDGTGHYNEKIDM--------YS-----LGIIFFEMIYPFSTGM--ER 234
Query: 243 TEELRNTASIPKSLLPDY--------QRLLSSM----PSRRLNSSKLIENSVGDFWMTEY 290
L+ S+ PD+ ++++ + P++R + L+ + W+
Sbjct: 235 VNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSG----WLPVK 290
Query: 291 FQNKLVD 297
Q++++
Sbjct: 291 HQDEVIK 297
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 6e-08
Identities = 48/273 (17%), Positives = 97/273 (35%), Gaps = 45/273 (16%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDA 95
F+ + DG +I A A V + +H +++ + S E+
Sbjct: 28 FKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY-FSAWAEDD-- 84
Query: 96 TSTKITIYIVTEPVMP--LSEKIKELGLEGSQRDEYYAWG-LNQIAKAVSFLNNDCKLVH 152
+ I E L++ I E S E L Q+ + + +++ LVH
Sbjct: 85 -----HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH-SMSLVH 138
Query: 153 -----GNVCLSSVVVTQTLDWKLHAFDVLSEFD-------GNNEAANGPMLQYAWLVG-A 199
N+ +S + + D S G+ + P ++ G +
Sbjct: 139 MDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVE----EGDS 194
Query: 200 QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRNTA--SIP 253
++ E+ + ++T + K+ D + L + L + + +R IP
Sbjct: 195 RFLANEVLQENYTHLPKA-----DIFALALTVVCAAGAEPLPRNGDQWHEIRQGRLPRIP 249
Query: 254 KSLLPDYQRLLSSM----PSRRLNSSKLIENSV 282
+ L ++ LL M P RR ++ L+++SV
Sbjct: 250 QVLSQEFTELLKVMIHPDPERRPSAMALVKHSV 282
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 2e-07
Identities = 42/243 (17%), Positives = 79/243 (32%), Gaps = 53/243 (21%)
Query: 66 ARNGVKRLRTVRHPNILAFLHS--------TEVENIDATSTKITIYIVTE--PVMPLSEK 115
A VK L + H NI+ + + S ++I E L +
Sbjct: 51 AEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQW 110
Query: 116 IKELGLEGSQRDEYYAWG-LNQIAKAVSFLNNDCKLVH-----GNVCLSSVVVTQTLDWK 169
I++ G + D+ A QI K V ++ + KL++ N+ L T K
Sbjct: 111 IEKRR--GEKLDKVLALELFEQITKGVDYI-HSKKLINRDLKPSNIFL-----VDTKQVK 162
Query: 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTA--VRKSPPWS--IDSW 225
+ F +++ + + G + + S + +D +
Sbjct: 163 IGDFGLVTSLKNDGKRTR--------SKGTLR---------YMSPEQISSQDYGKEVDLY 205
Query: 226 GLGCLIYEL----FSGMRLSKTEELRNTASIPKSLLPDYQRLLSSM----PSRRLNSSKL 277
LG ++ EL + SK I + LL + P R N+S++
Sbjct: 206 ALGLILAELLHVCDTAFETSKFFTDLRDGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEI 265
Query: 278 IEN 280
+
Sbjct: 266 LRT 268
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 52.7 bits (126), Expect = 2e-07
Identities = 35/264 (13%), Positives = 79/264 (29%), Gaps = 47/264 (17%)
Query: 71 KRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVM--PLSEKIKELGLEGSQR-- 126
+RL+ + F + +N +V E L I +
Sbjct: 119 ERLKPSMQHMFMKFYSAHLFQN--------GSVLVGELYSYGTLLNAINLYKNTPEKVMP 170
Query: 127 DEYYAWGLNQIAKAVSFLNNDCKLVHGNV----CLSSVVVTQTLDWKLHAFDV-LSEF-- 179
++ + ++ DC+++HG++ + + D + + L +
Sbjct: 171 QGLVISFAMRMLYMIEQVH-DCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQ 229
Query: 180 --DGNNEAANGPMLQYAWLVGAQ-YKPVE-LAKSDWTAVRKSPPWSIDSWGLGCLIYELF 235
D ++ VE L+ W + ID +G+ +Y +
Sbjct: 230 SIDMKLFPKGTIFTAKC---ETSGFQCVEMLSNKPWN-------YQIDYFGVAATVYCML 279
Query: 236 SGMRLSKTEELRNTASIPKSLLPDY----------QRLLSSMPSRRLNSSKLIENSVGDF 285
G + E P+ L +L+ L S L+ +
Sbjct: 280 FGTYMKVKNE--GGECKPEGLFRRLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKK- 336
Query: 286 WMTEYFQNKLVDTIHFMEILNLKD 309
+++ NK+ + + +L L+
Sbjct: 337 VFQQHYTNKIRALRNRLIVLLLEC 360
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 3e-07
Identities = 53/288 (18%), Positives = 103/288 (35%), Gaps = 61/288 (21%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
S +DG I I+ + +R V L ++HPNI+ + S E
Sbjct: 41 ILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENG---- 96
Query: 97 STKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYYAWG-LNQIAKAVSFLNNDCKLVHG 153
++YIV + L ++I +G E QI A+ + +D K++H
Sbjct: 97 ----SLYIVMDYCEGGDLFKRINA--QKGVLFQEDQILDWFVQICLALKHV-HDRKILHR 149
Query: 154 NVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQY--KPVEL----- 206
++ ++ +T+ +L F + + E A +G Y P E+
Sbjct: 150 DIKSQNIFLTKDGTVQLGDFGIARVLNSTVELAR-------ACIGTPYYLSP-EICENKP 201
Query: 207 --AKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---------NTASIPKS 255
KSD W LGC++YEL + + ++ + +
Sbjct: 202 YNNKSDI-------------WALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLH 248
Query: 256 LLPDYQRLLSSM----PSRRLNSSKLIENSVGDFWMTEYFQNKLVDTI 299
D + L+S + P R + + ++E ++ + + L +
Sbjct: 249 YSYDLRSLVSQLFKRNPRDRPSVNSILEKG----FIAKRIEKFLSPQL 292
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 1e-05
Identities = 49/267 (18%), Positives = 99/267 (37%), Gaps = 49/267 (18%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGH-LAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95
++ DG PV++ + + D A + L+ + HPN++ + S +N
Sbjct: 49 YRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN--- 105
Query: 96 TSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYYAWG-LNQIAKAVSFLNNDCKLVH 152
+ IV E LS IK + E W Q+ A+ + + +++H
Sbjct: 106 -----ELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM-HSRRVMH 159
Query: 153 GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWT 212
++ ++V +T T KL + F AA+ LVG Y +
Sbjct: 160 RDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS-------LVGTPY---------YM 203
Query: 213 A---VRKSP-PWSIDSWGLGCLIYELFSGMR--LSKTEELR---------NTASIPKSLL 257
+ + ++ + D W LGCL+YE+ + L + +P
Sbjct: 204 SPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHY 263
Query: 258 -PDYQRLLSSM----PSRRLNSSKLIE 279
+ ++L++ P +R + + + +
Sbjct: 264 SEELRQLVNMCINPDPEKRPDVTYVYD 290
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 44.2 bits (104), Expect = 1e-04
Identities = 34/235 (14%), Positives = 70/235 (29%), Gaps = 37/235 (15%)
Query: 73 LRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAW 132
++ + ++ + S + + E + +
Sbjct: 152 VKDPQKKKMIRVRLDERDMWV--LSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARL 209
Query: 133 GL-NQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPML 191
L Q+ + ++ L+ LVH + +V+ Q L F+ L ++
Sbjct: 210 QLTLQVIRLLASLH-HYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVSR-- 266
Query: 192 QYAWLVGAQYKPVELAKSDWTAVRKSPP-----WSIDSWGLGCLIYEL------FSGMRL 240
++P EL T +S D+W LG +IY + +
Sbjct: 267 --------GFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAA 318
Query: 241 SKTEE--LRNTASIP---KSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEY 290
E R+ +IP ++LL + L RL + +E +
Sbjct: 319 LGGSEWIFRSCKNIPQPVRALL---EGFLRYPKEDRLLPLQAMETP----EYEQL 366
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 6e-04
Identities = 48/277 (17%), Positives = 96/277 (34%), Gaps = 43/277 (15%)
Query: 32 GSWSH-FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTE 89
G ++ ++ G ++ + + A V ++ + HPNI+ F +
Sbjct: 39 GGFAFVYEAQDVGSGREYALKRLLSNEEEK--NRAIIQEVCFMKKLSGHPNIVQFCSAAS 96
Query: 90 VENIDATSTKITIYIVTE-PVMPLSEKIKELGLEGS-QRDEYYAWGLNQIAKAVSFL-NN 146
+ ++ + + ++TE L E +K++ G D Q +AV +
Sbjct: 97 IGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKI-FYQTCRAVQHMHRQ 155
Query: 147 DCKLVH-----GNVCLSSVVVTQTLDWKLHAF----DVLSEFDGNNEAANGPMLQ--YAW 195
++H N+ LS+ KL F + D + A +++
Sbjct: 156 KPPIIHRDLKVENLLLSN-----QGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITR 210
Query: 196 LVGAQYKPVELAKSDWTAVRKSP-PWSIDSWGLGCLIYEL------FSGMRLSKTEELRN 248
Y+ E+ P D W LGC++Y L F +K +
Sbjct: 211 NTTPMYRTPEI----IDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDG--AKLRIVNG 264
Query: 249 TASIPKSLL--PDYQRLLSSM----PSRRLNSSKLIE 279
SIP + L+ +M P RL+ ++++
Sbjct: 265 KYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVH 301
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 7e-04
Identities = 30/183 (16%), Positives = 62/183 (33%), Gaps = 24/183 (13%)
Query: 62 HLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDATSTKITIYIVTEPV-MPLSEKIKEL 119
+ A V+ LR HPN++ + + + YI E L E +++
Sbjct: 60 CFSFADREVQLLRESDEHPNVIRYFCTEKDRQ--------FQYIAIELCAATLQEYVEQK 111
Query: 120 GLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVH-----GNVCLSSVVVTQTLDWKLHAFD 174
+ L Q ++ L+ +VH N+ +S + + F
Sbjct: 112 DFAHLGLEPITL--LQQTTSGLAHLH-SLNIVHRDLKPHNILISMPNAHGKIKAMISDFG 168
Query: 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYEL 234
L + + G + E+ D +++P +++D + GC+ Y +
Sbjct: 169 -LCKKLAVGRHSFSRRSGVPGTEG--WIAPEMLSED---CKENPTYTVDIFSAGCVFYYV 222
Query: 235 FSG 237
S
Sbjct: 223 ISE 225
|
| >2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Length = 450 | Back alignment and structure |
|---|
Score = 41.4 bits (97), Expect = 9e-04
Identities = 55/323 (17%), Positives = 104/323 (32%), Gaps = 35/323 (10%)
Query: 317 FRKLPNLAEQLPRQIVLKK--LLPLLASALEFGS------AAAPALTALLKMGSWLSTEE 368
FRKL + P V+ ++ L+ +A LT + S +
Sbjct: 44 FRKLLSKEPNPPIDEVISTPGVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIV 103
Query: 369 FSVKVLPTIVKLFASNDRAIR---VALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTS- 424
+P ++L +S ++ V L +I V+D + P + F+ +
Sbjct: 104 IQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQNR 163
Query: 425 -AFLRE--MTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHL 481
R L ++ + L LS L + + + L ++
Sbjct: 164 LTMTRNAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLFVSDTDVLADACWALSYLSDGP 223
Query: 482 NEGTRKRVLINAFTVRALRDTFSPARGAAKILSYLNCDVRSKAFQAVDQFLQIVKQYHEK 541
N+ + + +I+A R L ++L + + V S A +AV IV +
Sbjct: 224 ND--KIQAVIDAGVCRRL----------VELLMHNDYKVVSPALRAV---GNIVTGDDIQ 268
Query: 542 TNTGDATGASSVGI----SSMPGNASLLGWAMSSLTLKGKPSEQAPVASANSITPLTSTT 597
T A + S W +S++T G ++ V AN L S
Sbjct: 269 TQVILNCSALQSLLHLLSSPKESIKKEACWTISNIT-AGNRAQIQTVIDANIFPALISIL 327
Query: 598 SSTSSVMENAINAPLRHVSSGTD 620
+ + + +SG
Sbjct: 328 QTAEFRTRKEAAWAITNATSGGS 350
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 778 | |||
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 99.98 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 99.98 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 99.98 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 99.98 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.98 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 99.98 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 99.98 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 99.98 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 99.98 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 99.98 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 99.98 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 99.97 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 99.97 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 99.97 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 99.97 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 99.97 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 99.97 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 99.97 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 99.97 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 99.97 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 99.97 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 99.97 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 99.97 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 99.97 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 99.97 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 99.97 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 99.97 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 99.97 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 99.97 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 99.97 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 99.97 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 99.97 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 99.97 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 99.97 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 99.97 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 99.97 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 99.97 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.96 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 99.95 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.91 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.76 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.72 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.6 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.33 | |
| 1b3u_A | 588 | Protein (protein phosphatase PP2A); scaffold prote | 99.22 | |
| 1b3u_A | 588 | Protein (protein phosphatase PP2A); scaffold prote | 99.19 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 98.71 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 98.58 | |
| 2qk2_A | 242 | LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2 | 98.46 | |
| 2qk2_A | 242 | LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2 | 98.42 | |
| 1ibr_B | 462 | P95, importin beta-1 subunit, nuclear factor; smal | 98.32 | |
| 3ltm_A | 211 | Alpha-REP4; protein engineering, heat-like repeat, | 98.31 | |
| 3ltj_A | 201 | Alpharep-4; protein engineering, heat-like repeat, | 98.24 | |
| 2qk1_A | 249 | Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, h | 98.22 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 98.16 | |
| 3ltj_A | 201 | Alpharep-4; protein engineering, heat-like repeat, | 98.13 | |
| 3ltm_A | 211 | Alpha-REP4; protein engineering, heat-like repeat, | 98.13 | |
| 4fdd_A | 852 | Transportin-1; heat repeats, karyopherin, nuclear | 98.12 | |
| 1u6g_C | 1230 | TIP120 protein, CAND1; cullin repeat, heat repeat, | 98.1 | |
| 4fdd_A | 852 | Transportin-1; heat repeats, karyopherin, nuclear | 98.04 | |
| 4hxt_A | 252 | De novo protein OR329; structural genomics, PSI-bi | 98.04 | |
| 2bpt_A | 861 | Importin beta-1 subunit; nuclear transport, nucleo | 97.99 | |
| 1ibr_B | 462 | P95, importin beta-1 subunit, nuclear factor; smal | 97.98 | |
| 1u6g_C | 1230 | TIP120 protein, CAND1; cullin repeat, heat repeat, | 97.97 | |
| 4db6_A | 210 | Armadillo repeat protein; solenoid repeat, armadil | 97.96 | |
| 2bpt_A | 861 | Importin beta-1 subunit; nuclear transport, nucleo | 97.92 | |
| 2jdq_A | 450 | Importin alpha-1 subunit; transport, PB2 subunit, | 97.89 | |
| 2jdq_A | 450 | Importin alpha-1 subunit; transport, PB2 subunit, | 97.87 | |
| 1oyz_A | 280 | Hypothetical protein YIBA; structural genomics, PS | 97.82 | |
| 4db8_A | 252 | Armadillo-repeat protein; solenoid repeat, de novo | 97.76 | |
| 4hxt_A | 252 | De novo protein OR329; structural genomics, PSI-bi | 97.75 | |
| 1wa5_B | 530 | Importin alpha subunit; nuclear transport/complex, | 97.73 | |
| 1wa5_B | 530 | Importin alpha subunit; nuclear transport/complex, | 97.72 | |
| 1qgr_A | 876 | Protein (importin beta subunit); transport recepto | 97.68 | |
| 4b8j_A | 528 | Importin subunit alpha-1A; transport protein, nucl | 97.68 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 97.62 | |
| 1qgr_A | 876 | Protein (importin beta subunit); transport recepto | 97.6 | |
| 4db8_A | 252 | Armadillo-repeat protein; solenoid repeat, de novo | 97.56 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 97.55 | |
| 2qk1_A | 249 | Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, h | 97.55 | |
| 4b8j_A | 528 | Importin subunit alpha-1A; transport protein, nucl | 97.54 | |
| 1oyz_A | 280 | Hypothetical protein YIBA; structural genomics, PS | 97.48 | |
| 2vgl_B | 591 | AP-2 complex subunit beta-1; cytoplasmic vesicle, | 97.46 | |
| 2vgl_B | 591 | AP-2 complex subunit beta-1; cytoplasmic vesicle, | 97.43 | |
| 3tpo_A | 529 | Importin subunit alpha-2; nuclear import, protein | 97.4 | |
| 3ul1_B | 510 | Importin subunit alpha-2; arm repeat, armadillo re | 97.3 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 97.27 | |
| 3tpo_A | 529 | Importin subunit alpha-2; nuclear import, protein | 97.26 | |
| 3tjz_B | 355 | Coatomer subunit gamma; protein trafficking, golgi | 97.24 | |
| 4ffb_C | 278 | Protein STU2; tubulin fold, heat repeats, cytoskel | 97.17 | |
| 4db6_A | 210 | Armadillo repeat protein; solenoid repeat, armadil | 97.11 | |
| 1te4_A | 131 | Conserved protein MTH187; methanobacterium thermoa | 97.08 | |
| 3ul1_B | 510 | Importin subunit alpha-2; arm repeat, armadillo re | 97.02 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 97.0 | |
| 4ffb_C | 278 | Protein STU2; tubulin fold, heat repeats, cytoskel | 96.92 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 96.92 | |
| 1w63_A | 618 | Adapter-related protein complex 1 gamma 1 subunit; | 96.91 | |
| 2of3_A | 266 | ZYG-9; multifunctional macromolecule, kinetochore, | 96.67 | |
| 1xqr_A | 296 | HSPBP1 protein; armadillo repeat, superhelical twi | 96.57 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 96.49 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 96.37 | |
| 1w63_A | 618 | Adapter-related protein complex 1 gamma 1 subunit; | 96.36 | |
| 1te4_A | 131 | Conserved protein MTH187; methanobacterium thermoa | 96.24 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 96.24 | |
| 2vgl_A | 621 | Adaptor protein complex AP-2, alpha 2 subunit; cyt | 96.15 | |
| 2z6h_A | 644 | Catenin beta-1, beta-catenin; C-terminal domain, a | 96.08 | |
| 1xqr_A | 296 | HSPBP1 protein; armadillo repeat, superhelical twi | 96.05 | |
| 2vgl_A | 621 | Adaptor protein complex AP-2, alpha 2 subunit; cyt | 95.92 | |
| 2z6g_A | 780 | B-catenin; FULL-length, beta-catenin, cell adhesio | 95.88 | |
| 1jdh_A | 529 | Beta-catenin; beta-catenin, protein-protein comple | 95.78 | |
| 2of3_A | 266 | ZYG-9; multifunctional macromolecule, kinetochore, | 95.72 | |
| 1jdh_A | 529 | Beta-catenin; beta-catenin, protein-protein comple | 95.61 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 95.56 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 95.4 | |
| 2iw3_A | 986 | Elongation factor 3A; acetylation, ATP-binding, pr | 95.25 | |
| 1xm9_A | 457 | Plakophilin 1; armadillo repeat, cell adhesion; 2. | 95.0 | |
| 2z6g_A | 780 | B-catenin; FULL-length, beta-catenin, cell adhesio | 94.79 | |
| 3nmw_A | 354 | APC variant protein; ARMADIILO repeats domain, cel | 94.5 | |
| 3now_A | 810 | UNC-45 protein, SD10334P; armadillo repeat, HSP90, | 94.3 | |
| 2z6h_A | 644 | Catenin beta-1, beta-catenin; C-terminal domain, a | 94.24 | |
| 3nmz_A | 458 | APC variant protein; protein-protein complex, arma | 94.07 | |
| 1lrv_A | 244 | LRV, leucine-rich repeat variant; leucine-rich rep | 93.65 | |
| 3now_A | 810 | UNC-45 protein, SD10334P; armadillo repeat, HSP90, | 93.64 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 93.45 | |
| 1wa5_C | 960 | Importin alpha RE-exporter; nuclear transport/comp | 93.02 | |
| 3oc3_A | 800 | Helicase MOT1, MOT1; regulation of transcription, | 93.02 | |
| 2iw3_A | 986 | Elongation factor 3A; acetylation, ATP-binding, pr | 92.98 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 92.84 | |
| 3b2a_A | 265 | TON_1937, putative uncharacterized protein; heat-r | 91.89 | |
| 3nmw_A | 354 | APC variant protein; ARMADIILO repeats domain, cel | 91.76 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 91.62 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 91.08 | |
| 1xm9_A | 457 | Plakophilin 1; armadillo repeat, cell adhesion; 2. | 90.09 | |
| 3tjz_B | 355 | Coatomer subunit gamma; protein trafficking, golgi | 89.83 | |
| 1lrv_A | 244 | LRV, leucine-rich repeat variant; leucine-rich rep | 87.92 | |
| 3l9t_A | 240 | Putative uncharacterized protein SMU.31; hypotheti | 87.17 | |
| 1wa5_C | 960 | Importin alpha RE-exporter; nuclear transport/comp | 86.19 | |
| 3tt9_A | 233 | Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} | 84.5 | |
| 2x1g_F | 971 | Cadmus; transport protein, developmental protein, | 83.8 | |
| 3nmz_A | 458 | APC variant protein; protein-protein complex, arma | 83.32 | |
| 2x19_B | 963 | Importin-13; nuclear transport, protein transport; | 83.25 | |
| 3l6x_A | 584 | Catenin delta-1; catenin, armadillo, ARM, JMD, CE | 82.78 |
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-45 Score=399.84 Aligned_cols=239 Identities=20% Similarity=0.252 Sum_probs=198.0
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.++||.|+ | +||+|+++.+|+.||||++.+........+.+++|+++|++|+||||++++++++++
T Consensus 24 e~Y~~~~~lG~G~fg--~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~------ 95 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFG--KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEEN------ 95 (350)
T ss_dssp CCEEEEEEC--------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET------
T ss_pred cceEEeEEEecCCCe--EEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEEC------
Confidence 4799999999999 9 999999999999999999998766666678899999999999999999999999874
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+||||||| ++|.++|...+... ..+..+..++.||+.||.|||+ .+||||||||+|||++.+|.+||+|||+
T Consensus 96 --~~~yiVmEy~~gg~L~~~i~~~~~~~-~~e~~~~~~~~qi~~aL~ylH~-~~IiHRDlKp~NILl~~~g~vKl~DFGl 171 (350)
T 4b9d_A 96 --GSLYIVMDYCEGGDLFKRINAQKGVL-FQEDQILDWFVQICLALKHVHD-RKILHRDIKSQNIFLTKDGTVQLGDFGI 171 (350)
T ss_dssp --TEEEEEEECCTTCBHHHHHHHTTTCC-CCHHHHHHHHHHHHHHHHHHHH-TTCEETTCCGGGEEECTTCCEEECSTTE
T ss_pred --CEEEEEEeCCCCCcHHHHHHHcCCCC-CCHHHHHHHHHHHHHHHHHHHH-CCeeeccCCHHHEEECCCCCEEEccccc
Confidence 4899999999 58999998654222 2234456679999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc-------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------- 248 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~------- 248 (778)
++.+.... ......+++..|||||++.+ ..++.++|||||||++|||++|.+||.......
T Consensus 172 a~~~~~~~------~~~~~~~GT~~YmAPE~l~~------~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~ 239 (350)
T 4b9d_A 172 ARVLNSTV------ELARACIGTPYYLSPEICEN------KPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIIS 239 (350)
T ss_dssp ESCCCHHH------HHHHHHHSCCTTCCHHHHTT------CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred ceeecCCc------ccccccCCCccccCHHHHCC------CCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHc
Confidence 98765321 11223456779999999987 467889999999999999999999997543211
Q ss_pred ------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+|..+.+++.+||..||.+||++.++|+|+
T Consensus 240 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp 278 (350)
T 4b9d_A 240 GSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKG 278 (350)
T ss_dssp TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSH
T ss_pred CCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCH
Confidence 134667789999999999999999999999998
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-45 Score=386.76 Aligned_cols=237 Identities=16% Similarity=0.212 Sum_probs=188.3
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
.+|++.+.||.|+ | +||+|+++.+|+.||||++.+....+ .....+.+|+++|++|+||||++++++++++
T Consensus 13 g~Y~i~~~lG~G~fg--~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~----- 85 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFG--KVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSK----- 85 (275)
T ss_dssp -CCEEEEEEEC---C--CEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECS-----
T ss_pred eCeEEEEEEecCcCe--EEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC-----
Confidence 4799999999999 9 89999999999999999998764332 3456789999999999999999999999874
Q ss_pred CcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 97 ~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+||||||| ++|.++|.+.+. ..+..++.++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|||+
T Consensus 86 ---~~~~ivmEy~~g~L~~~l~~~~~---l~e~~~~~~~~qi~~al~ylH~-~~IiHRDiKP~NILl~~~~~vkl~DFGl 158 (275)
T 3hyh_A 86 ---DEIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQQIISAVEYCHR-HKIVHRDLKPENLLLDEHLNVKIADFGL 158 (275)
T ss_dssp ---SEEEEEEECCCEEHHHHHHHSCS---CCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCTTTEEECTTCCEEECCSSC
T ss_pred ---CEEEEEEeCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCcccccCChHHeEECCCCCEEEeecCC
Confidence 4899999999 579999987643 3345567779999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc-------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------- 248 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~------- 248 (778)
++...... ......+++.|||||++.+. ..++.++|||||||++|+|++|..||.......
T Consensus 159 a~~~~~~~-------~~~~~~GT~~Y~APE~~~~~-----~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~ 226 (275)
T 3hyh_A 159 SNIMTDGN-------FLKTSCGSPNYAAPEVISGK-----LYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISN 226 (275)
T ss_dssp C----------------------CTTSCHHHHSSS-----SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred CeecCCCC-------ccCCeeECcccCChhhhcCC-----CCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc
Confidence 98765421 11234567799999999863 234679999999999999999999997543211
Q ss_pred -c----CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -T----ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -~----~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ..+++.+.+++++||..||.+|||+.++++|+
T Consensus 227 ~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp 264 (275)
T 3hyh_A 227 GVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDD 264 (275)
T ss_dssp TCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCH
T ss_pred CCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcCc
Confidence 1 24566788999999999999999999999998
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-45 Score=390.94 Aligned_cols=239 Identities=14% Similarity=0.231 Sum_probs=198.7
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
.+|++++.||.|+ | +||+|+++.+|+.||||++.+... .+...+.+.+|+++|++|+||||++++++++++
T Consensus 32 ~dy~i~~~lG~G~fg--~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~----- 104 (311)
T 4aw0_A 32 EDFKFGKILGEGSFS--TVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDD----- 104 (311)
T ss_dssp GGEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS-----
T ss_pred cccEEEEEEecccCe--EEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC-----
Confidence 3599999999998 8 999999999999999999986432 223466799999999999999999999999974
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
.++||||||| ++|.++|++.+.. .+..++.++.||+.||.|||+ .+|+||||||+|||++.+|.+||+|||
T Consensus 105 ---~~~yivmEy~~gG~L~~~i~~~~~l---~e~~~~~~~~qi~~al~ylH~-~~IiHRDlKPeNILl~~~g~vKl~DFG 177 (311)
T 4aw0_A 105 ---EKLYFGLSYAKNGELLKYIRKIGSF---DETCTRFYTAEIVSALEYLHG-KGIIHRDLKPENILLNEDMHIQITDFG 177 (311)
T ss_dssp ---SEEEEEECCCTTEEHHHHHHHHSSC---CHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECTTSCEEECCCT
T ss_pred ---CEEEEEEecCCCCCHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCCccCCCCHHHeEEcCCCCEEEEEcC
Confidence 4899999999 5899999886532 345567779999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------ 248 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~------ 248 (778)
+++.+...... ......++++.|||||++.+ ..++.++|+|||||++|||++|.+||.......
T Consensus 178 la~~~~~~~~~----~~~~~~~GTp~YmAPEvl~~------~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~ 247 (311)
T 4aw0_A 178 TAKVLSPESKQ----ARANSFVGTAQYVSPELLTE------KSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKII 247 (311)
T ss_dssp TCEECCTTTTC----CCBCCCCSCGGGCCHHHHHH------SCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred CceecCCCCCc----ccccCcccCcccCCHHHHcC------CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 99987543211 11233466779999999987 467889999999999999999999997542211
Q ss_pred ------cCCCCcchHHHHHHHhccCCCCCCChHHH------Hhcc
Q 004025 249 ------TASIPKSLLPDYQRLLSSMPSRRLNSSKL------IENS 281 (778)
Q Consensus 249 ------~~~iP~~L~~~i~~lL~~dP~~Rps~~~l------L~~~ 281 (778)
...+++.+.+++++||..||.+|+++.++ ++|+
T Consensus 248 ~~~~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp 292 (311)
T 4aw0_A 248 KLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHP 292 (311)
T ss_dssp HTCCCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSG
T ss_pred cCCCCCCcccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCC
Confidence 13456678899999999999999999885 5666
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-44 Score=393.46 Aligned_cols=235 Identities=19% Similarity=0.201 Sum_probs=198.8
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
...|++.++||.|+ | +||+|+++.+|+.||||++++.... ..+.+.+|+++|+.|+||||++++++++++
T Consensus 73 ~~~y~~~~~iG~G~fG--~V~~a~~~~tg~~vAiK~i~~~~~~--~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~----- 143 (346)
T 4fih_A 73 RSYLDNFIKIGEGSTG--IVCIATVRSSGKLVAVKKMDLRKQQ--RRELLFNEVVIMRDYQHENVVEMYNSYLVG----- 143 (346)
T ss_dssp GGTEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEEEGGGCS--SGGGGHHHHHHHHHCCCTTBCCEEEEEEET-----
T ss_pred hHhcEEeEEeecCcCe--EEEEEEECCCCCEEEEEEEecCchh--HHHHHHHHHHHHHhCCCCCCCcEEEEEEEC-----
Confidence 35699999999999 9 9999999999999999999865333 234678999999999999999999999974
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
.++||||||| ++|.+++.+..+ .+..++.++.||+.||.|||+ .+|+||||||+|||++.+|.+||+|||
T Consensus 144 ---~~~~ivmEy~~gg~L~~~l~~~~l----~e~~~~~~~~qi~~aL~ylH~-~~IiHRDlKp~NILl~~~g~vKl~DFG 215 (346)
T 4fih_A 144 ---DELWVVMEFLEGGALTDIVTHTRM----NEEQIAAVCLAVLQALSVLHA-QGVIHRDIKSDSILLTHDGRVKLSDFG 215 (346)
T ss_dssp ---TEEEEEECCCTTEEHHHHHHHSCC----CHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECTTCCEEECCCT
T ss_pred ---CEEEEEEeCCCCCcHHHHHHcCCC----CHHHHHHHHHHHHHHHHHHHH-CCcccccCCHHHEEECCCCCEEEecCc
Confidence 4899999999 579999987543 345567779999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----h---
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R--- 247 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~--- 247 (778)
+++.+..... .....++++.|||||++.+ ..|+.++|||||||++|||++|.+||..... .
T Consensus 216 la~~~~~~~~------~~~~~~GTp~YmAPEvl~~------~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~ 283 (346)
T 4fih_A 216 FCAQVSKEVP------RRKSLVGTPYWMAPELISR------LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR 283 (346)
T ss_dssp TCEECCSSSC------CBCCCCSCGGGCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH
T ss_pred CceecCCCCC------cccccccCcCcCCHHHHCC------CCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHH
Confidence 9988765321 1223456679999999876 4678999999999999999999999864321 1
Q ss_pred --------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 --------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 --------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+++.+.+++.+||..||.+|||+.++++|+
T Consensus 284 ~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp 325 (346)
T 4fih_A 284 DNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHP 325 (346)
T ss_dssp HSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCG
T ss_pred cCCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCH
Confidence 1134677889999999999999999999999998
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=396.55 Aligned_cols=235 Identities=19% Similarity=0.200 Sum_probs=200.2
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
...|++.++||.|+ | +||+|+++.+|+.||||+++...... .+.+.+|+++|+.|+||||++++++|+++
T Consensus 150 ~~~y~~~~~iG~G~fG--~V~~a~~~~tg~~vAiK~i~~~~~~~--~~~~~~Ei~il~~l~HpnIV~l~~~~~~~----- 220 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTG--IVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVIMRDYQHENVVEMYNSYLVG----- 220 (423)
T ss_dssp GGTEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEEESTTCSS--GGGHHHHHHHHHHCCCTTBCCEEEEEEET-----
T ss_pred hHhcEeeeEeccCcCc--EEEEEEECCCCCEEEEEEEeccchhH--HHHHHHHHHHHHhCCCCCCCceEEEEEEC-----
Confidence 35699999999999 9 99999999999999999998754332 35688999999999999999999999974
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+||||||| ++|.++++...+ .+..++.++.||+.||.|||+ .+||||||||+|||++.+|.+||+|||
T Consensus 221 ---~~~~iVmEy~~gG~L~~~i~~~~l----~e~~~~~~~~qil~aL~ylH~-~~IiHRDiKp~NILl~~~g~vKl~DFG 292 (423)
T 4fie_A 221 ---DELWVVMEFLEGGALTDIVTHTRM----NEEQIAAVCLAVLQALSVLHA-QGVIHRDIKSDSILLTHDGRVKLSDFG 292 (423)
T ss_dssp ---TEEEEEEECCTTEEHHHHHHHSCC----CHHHHHHHHHHHHHHHHHHHH-TTEECCCCSTTTEEECTTCCEEECCCT
T ss_pred ---CEEEEEEeCCCCCcHHHHHhccCC----CHHHHHHHHHHHHHHHHHHHH-CCeecccCCHHHEEEcCCCCEEEecCc
Confidence 3899999999 579999986543 345577779999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh--------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------- 246 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l-------- 246 (778)
+++.+..... .....+++..|||||++.+ ..|+.++|||||||++|||++|.+||.....
T Consensus 293 la~~~~~~~~------~~~~~~GTp~YmAPEvl~~------~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~ 360 (423)
T 4fie_A 293 FCAQVSKEVP------RRKSLVGTPYWMAPELISR------LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR 360 (423)
T ss_dssp TCEECCSSCC------CBCCCEECTTTCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH
T ss_pred cceECCCCCc------cccccccCcCcCCHHHHCC------CCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHH
Confidence 9988765321 1223466779999999876 4678999999999999999999999864321
Q ss_pred -------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 -------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 -------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....++..+.+++.+||..||.+|+++.++|+|+
T Consensus 361 ~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp 402 (423)
T 4fie_A 361 DNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHP 402 (423)
T ss_dssp HSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCG
T ss_pred cCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCH
Confidence 11235677899999999999999999999999998
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-43 Score=376.13 Aligned_cols=238 Identities=15% Similarity=0.177 Sum_probs=195.6
Q ss_pred CCc-eeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 19 LPY-NIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 19 ~~Y-~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
.+| .+.++||.|+ | +||+|+++.++..||||++..........+.+.+|+++|++|+||||+++++++++...+
T Consensus 25 gr~~~~~~~iG~G~fg--~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~-- 100 (290)
T 3fpq_A 25 GRFLKFDIEIGRGSFK--TVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKG-- 100 (290)
T ss_dssp SSEEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETT--
T ss_pred CceEEeeeEEecCcCc--EEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCC--
Confidence 344 7888999998 8 999999999999999999987655555677899999999999999999999999863322
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCC--ccccccCCCCeEEc-CCCcEEEE
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCK--LVHGNVCLSSVVVT-QTLDWKLH 171 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~--ivH~dLkp~NI~v~-~~g~~KL~ 171 (778)
...+||||||| ++|.++|++.... ....+..++.||+.||.|||+ .+ |+||||||+|||++ .+|.+||+
T Consensus 101 --~~~~~lvmEy~~gg~L~~~l~~~~~l---~~~~~~~~~~qi~~aL~ylH~-~~~~IiHRDlKp~NILl~~~~g~vKl~ 174 (290)
T 3fpq_A 101 --KKCIVLVTELMTSGTLKTYLKRFKVM---KIKVLRSWCRQILKGLQFLHT-RTPPIIHRDLKCDNIFITGPTGSVKIG 174 (290)
T ss_dssp --EEEEEEEEECCCSCBHHHHHHHHSSC---CHHHHHHHHHHHHHHHHHHHT-SSSCCCCCCCCGGGEEESSTTSCEEEC
T ss_pred --CcEEEEEEeCCCCCCHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHH-CCCCEEecccChhheeEECCCCCEEEE
Confidence 35899999999 5899999876532 234456669999999999996 66 99999999999998 48999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh----hh-
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----EL- 246 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~----~l- 246 (778)
|||+++..... .....++++.|||||++.+ .++.++|||||||++|||++|.+||... .+
T Consensus 175 DFGla~~~~~~--------~~~~~~GTp~YmAPE~~~~-------~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~ 239 (290)
T 3fpq_A 175 DLGLATLKRAS--------FAKAVIGTPEFMAPEMYEE-------KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIY 239 (290)
T ss_dssp CTTGGGGCCTT--------SBEESCSSCCCCCGGGGGT-------CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHH
T ss_pred eCcCCEeCCCC--------ccCCcccCccccCHHHcCC-------CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHH
Confidence 99999764331 1223466779999999864 4678999999999999999999998532 11
Q ss_pred hc----------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 RN----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ~~----------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. ...+++.+.+++.+||..||.+|||+.++|+|+
T Consensus 240 ~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp 284 (290)
T 3fpq_A 240 RRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHA 284 (290)
T ss_dssp HHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred HHHHcCCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCc
Confidence 11 123456788999999999999999999999998
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-43 Score=379.43 Aligned_cols=237 Identities=15% Similarity=0.213 Sum_probs=188.8
Q ss_pred CCceeccCCCCCC-CceEEEEeEEC---CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSK---DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k---~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
.+|++.+.||.|+ | +||.|++. .+++.||||++.+..........+.+|+++|++|+||||++++++++++
T Consensus 24 ~~Y~i~~~lG~G~fg--~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~--- 98 (304)
T 3ubd_A 24 SQFELLKVLGQGSFG--KVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTE--- 98 (304)
T ss_dssp GGEEEEEEEECGGGC--EEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEET---
T ss_pred cccEEEEEEecCCCe--EEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC---
Confidence 4699999999999 9 99999884 4678999999986543332334578899999999999999999999974
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+||||||| ++|.++|++.+.. .+..++.++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|
T Consensus 99 -----~~~~ivmEy~~gg~L~~~l~~~~~l---~e~~~~~~~~qi~~aL~ylH~-~~IiHRDlKp~NILl~~~g~vKl~D 169 (304)
T 3ubd_A 99 -----GKLYLILDFLRGGDLFTRLSKEVMF---TEEDVKFYLAELALALDHLHS-LGIIYRDLKPENILLDEEGHIKLTD 169 (304)
T ss_dssp -----TEEEEEECCCTTCEEHHHHHHHCCC---CHHHHHHHHHHHHHHHHHHHH-TTCCCSSCCGGGEEECTTSCEEEES
T ss_pred -----CEEEEEEEcCCCCCHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHH-CCCcCCCCCHHHeEEcCCCCEEecc
Confidence 3899999999 5899999886532 344567779999999999996 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh-----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----- 247 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~----- 247 (778)
||+++....... .....++++.|||||++.+ ..++.++|+|||||++|||++|.+||......
T Consensus 170 FGla~~~~~~~~------~~~~~~GT~~YmAPE~~~~------~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~ 237 (304)
T 3ubd_A 170 FGLSKESIDHEK------KAYSFCGTVEYMAPEVVNR------RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM 237 (304)
T ss_dssp SEEEEC-----C------CCCSCCCCGGGCCHHHHHT------SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred cccceeccCCCc------cccccccCcccCCHHHhcc------CCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHH
Confidence 999987644211 1223456679999999886 46788999999999999999999999753221
Q ss_pred ---c----cCCCCcchHHHHHHHhccCCCCCCC-----hHHHHhcc
Q 004025 248 ---N----TASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENS 281 (778)
Q Consensus 248 ---~----~~~iP~~L~~~i~~lL~~dP~~Rps-----~~~lL~~~ 281 (778)
. ...+++.+.+++++||..||.+||+ ++++++|+
T Consensus 238 i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp 283 (304)
T 3ubd_A 238 ILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHS 283 (304)
T ss_dssp HHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSG
T ss_pred HHcCCCCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCc
Confidence 1 1346677889999999999999998 47999998
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=377.89 Aligned_cols=233 Identities=14% Similarity=0.115 Sum_probs=188.1
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
.|++.++||.|+ | +||+|+++.+|+.||||++..... ..+|+++|+.|+||||++++++++++
T Consensus 59 ~~~~~~~lG~G~fG--~Vy~a~~~~~g~~vAiK~i~~~~~-------~~~E~~il~~l~HpnIV~l~~~~~~~------- 122 (336)
T 4g3f_A 59 WMTHQPRVGRGSFG--EVHRMKDKQTGFQCAVKKVRLEVF-------RVEELVACAGLSSPRIVPLYGAVREG------- 122 (336)
T ss_dssp EEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEETTTC-------CTHHHHTTTTCCCTTBCCEEEEEEET-------
T ss_pred heEeCcEeccCCCe--EEEEEEECCCCCEEEEEEECHHHh-------HHHHHHHHHhCCCCCCCcEEEEEEEC-------
Confidence 478888999998 8 999999999999999999986432 24699999999999999999999874
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC-cEEEEeccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-DWKLHAFDV 175 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g-~~KL~dFgl 175 (778)
..+||||||| ++|.++|++.+.. .+..+..++.||+.||.|||+ .+||||||||+|||++.+| .+||+|||+
T Consensus 123 -~~~~ivmEy~~gg~L~~~l~~~~~l---~e~~~~~~~~qi~~aL~ylH~-~~IiHRDlKp~NILl~~~g~~vKl~DFGl 197 (336)
T 4g3f_A 123 -PWVNIFMELLEGGSLGQLIKQMGCL---PEDRALYYLGQALEGLEYLHT-RRILHGDVKADNVLLSSDGSRAALCDFGH 197 (336)
T ss_dssp -TEEEEEECCCTTCBHHHHHHHHSSC---CHHHHHHHHHHHHHHHHHHHT-TTEECSCCCGGGEEECTTSCCEEECCCTT
T ss_pred -CEEEEEEeccCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCceecccCHHHEEEeCCCCEEEEeeCCC
Confidence 4899999999 5899999886532 344566779999999999995 8999999999999999988 599999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh--------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~-------- 247 (778)
++.+........ .......++++.|||||++.+ ..++.++|||||||++|||++|.+||......
T Consensus 198 a~~~~~~~~~~~-~~~~~~~~GT~~YmAPE~~~~------~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~ 270 (336)
T 4g3f_A 198 ALCLQPDGLGKS-LLTGDYIPGTETHMAPEVVMG------KPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIAS 270 (336)
T ss_dssp CEEC-------------CCCCCCGGGCCHHHHTT------CCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHH
T ss_pred CeEccCCCcccc-eecCCccccCccccCHHHHCC------CCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHc
Confidence 988765321111 111112345669999999987 46788999999999999999999998643211
Q ss_pred -------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 -------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 -------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+|+.+.+++.+||..||.+|||+.+++++
T Consensus 271 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~ 310 (336)
T 4g3f_A 271 EPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRK 310 (336)
T ss_dssp SCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence 113566778899999999999999999998764
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-42 Score=383.19 Aligned_cols=253 Identities=17% Similarity=0.254 Sum_probs=202.2
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.||.|+ | +||+|+++.+|+.||||++.+........+.+.+|+++|+.|+||||++++++++..... .
T Consensus 54 ~~Y~~~~~lG~G~fG--~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~--~ 129 (398)
T 4b99_A 54 DEYEIIETIGNGAYG--VVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPY--G 129 (398)
T ss_dssp SSEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCT--T
T ss_pred CCeEEEEEEecccCe--EEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeeccccc--c
Confidence 3699999999999 9 999999999999999999987665556667888999999999999999999998753210 0
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
...++||||||| ++|.++|...+. .....++.+++||+.||.|||+ ++||||||||+||+++.+|.+||+|||++
T Consensus 130 ~~~~~~ivmE~~~g~L~~~i~~~~~---l~~~~~~~~~~qil~al~ylH~-~~iiHRDlKP~NIl~~~~~~~Ki~DFGla 205 (398)
T 4b99_A 130 EFKSVYVVLDLMESDLHQIIHSSQP---LTLEHVRYFLYQLLRGLKYMHS-AQVIHRDLKPSNLLVNENCELKIGDFGMA 205 (398)
T ss_dssp TCCCEEEEEECCSEEHHHHHTSSSC---CCHHHHHHHHHHHHHHHHHHHH-TTCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred cCCEEEEEEeCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CcCcCCCcCccccccCCCCCEEEeeccee
Confidence 135899999999 679998876442 3455677889999999999996 99999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hhc----
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRN---- 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~~---- 248 (778)
+.+....... .......+++..|+|||++.+. ..++.++|||||||++|||++|.+||.... +..
T Consensus 206 ~~~~~~~~~~--~~~~~~~~GT~~Y~APEv~~~~-----~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~ 278 (398)
T 4b99_A 206 RGLCTSPAEH--QYFMTEYVATRWYRAPELMLSL-----HEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMV 278 (398)
T ss_dssp BCC---------CCCCCSSCCCCTTCCHHHHTTC-----SCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHH
T ss_pred eecccCcccc--ccccccceeChHhcCHHHhcCC-----CCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHh
Confidence 8775432111 1112334677799999998763 456889999999999999999999986421 110
Q ss_pred -----------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcccCCcccccc
Q 004025 249 -----------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEY 290 (778)
Q Consensus 249 -----------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~f 290 (778)
...++..+.+++.+||..||.+|+|+.++|+|+ |+..+
T Consensus 279 ~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp----~f~~~ 351 (398)
T 4b99_A 279 LGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHP----FLAKY 351 (398)
T ss_dssp HCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSG----GGTTT
T ss_pred cCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCH----hhCcC
Confidence 013455678899999999999999999999999 66544
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-42 Score=367.66 Aligned_cols=249 Identities=21% Similarity=0.239 Sum_probs=185.6
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc---
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA--- 95 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g--- 95 (778)
+|++.+.||.|+ | +||+|+++.+|+.||||++.... .+...+.+.+|+++|++|+||||+++++++++.+...
T Consensus 6 dy~~~~~lG~G~fg--~V~~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~ 82 (299)
T 4g31_A 6 DFEPIQCLGRGGFG--VVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQ 82 (299)
T ss_dssp HEEEEEEEEECC----EEEEEEETTTCCEEEEEEEEECS-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC------
T ss_pred hCEEeeEEecCCCe--EEEEEEECCCCCEEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccc
Confidence 599999999999 9 99999999999999999998653 3345567899999999999999999999998644210
Q ss_pred -CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 96 -TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 96 -~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
.....++||||||| ++|.++++............+..++.||+.||.|||+ .+|+||||||+|||++.+|.+||+|
T Consensus 83 ~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~-~~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 83 PSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHS-KGLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp ----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEECTTCCEEECC
T ss_pred ccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHH-CcCccccCcHHHeEECCCCcEEEcc
Confidence 01134689999999 5899999876543333334455679999999999996 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCC------CccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh--
Q 004025 173 FDVLSEFDGNNEAANG------PMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-- 244 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~------~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~-- 244 (778)
||+++.+......... .......++++.|||||++.+ ..++.++|||||||++|||++ ||...
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~------~~y~~~~DiwSlGvilyell~---Pf~~~~~ 232 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHG------NSYSHKVDIFSLGLILFELLY---PFSTQME 232 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTT------CCCCTHHHHHHHHHHHHHHHS---CCSSHHH
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcC------CCCCCHHHHHHHHHHHHHHcc---CCCCccH
Confidence 9999887654321110 011223456779999999987 468899999999999999996 44432
Q ss_pred hh---hc--cCCCC-------cchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 245 EL---RN--TASIP-------KSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 245 ~l---~~--~~~iP-------~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. .. ...+| +.+..++++||..||.+||++.++++|+
T Consensus 233 ~~~~~~~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~ 281 (299)
T 4g31_A 233 RVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENA 281 (299)
T ss_dssp HHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred HHHHHHHHhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCH
Confidence 11 11 12333 3356789999999999999999999998
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-41 Score=360.31 Aligned_cols=242 Identities=15% Similarity=0.160 Sum_probs=188.3
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
+....|+++++||.|+ | +||+|+.+ ..||||+++.........+.+++|+++|++|+||||+++++++..
T Consensus 33 i~~~~l~l~~~iG~G~fG--~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~---- 103 (307)
T 3omv_A 33 IEASEVMLSTRIGSGSFG--TVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK---- 103 (307)
T ss_dssp CCTTSCCEEEECCCCSSS--EEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS----
T ss_pred EcHHHeEEeeEEeeCCCc--EEEEEEEC---CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC----
Confidence 4455788999999999 9 99999875 359999997655555667889999999999999999999998753
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+||||||| ++|.++|..... ......+..++.||+.||.|||+ .+||||||||+|||++++|.+||+|
T Consensus 104 -----~~~~iVmEy~~gGsL~~~l~~~~~--~l~~~~~~~i~~qia~gL~yLH~-~~IiHRDlKp~NILl~~~~~~Ki~D 175 (307)
T 3omv_A 104 -----DNLAIVTQWCEGSSLYKHLHVQET--KFQMFQLIDIARQTAQGMDYLHA-KNIIHRDMKSNNIFLHEGLTVKIGD 175 (307)
T ss_dssp -----SSCEEEEECCSSCBHHHHHHTSCC--CCCHHHHHHHHHHHHHHHHHHHH-TTCBCSCCCSSSEEEETTEEEEECC
T ss_pred -----CeEEEEEEcCCCCCHHHHHhhcCC--CCCHHHHHHHHHHHHHHHHHHHH-CCccCCccCHHHEEECCCCcEEEee
Confidence 2589999999 689999976432 12233455669999999999996 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----h--
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----L-- 246 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l-- 246 (778)
||+++........ .......++..|||||++.+... ..++.++|||||||++|||++|..||.... +
T Consensus 176 FGla~~~~~~~~~----~~~~~~~GT~~ymAPE~l~~~~~---~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~ 248 (307)
T 3omv_A 176 FGLATVKSRWSGS----QQVEQPTGSVLWMAPEVIRMQDN---NPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIF 248 (307)
T ss_dssp CSSCBC----------------CCCCTTSCCHHHHHCCSS---CCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHH
T ss_pred ccCceecccCCcc----eeecccccCCCccCHHHhhccCC---CCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHH
Confidence 9999876542111 01122356679999999864210 246789999999999999999999985321 1
Q ss_pred --hc----------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 --RN----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 --~~----------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. ...+|..+.+++.+||..||.+|||+.+++++.
T Consensus 249 ~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L 295 (307)
T 3omv_A 249 MVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSI 295 (307)
T ss_dssp HHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHH
T ss_pred HHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHH
Confidence 00 124667789999999999999999999987654
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-41 Score=360.00 Aligned_cols=241 Identities=15% Similarity=0.178 Sum_probs=190.6
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEEC-----CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeE
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSK-----DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTE 89 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k-----~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e 89 (778)
++..+|.++++||.|+ | +||+|+.+ .++..||||++... .+...+.+.+|+++|++|+||||+++++++.
T Consensus 10 I~r~~~~l~~~lG~G~fG--~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~ 85 (299)
T 4asz_A 10 IKRHNIVLKRELGEGAFG--KVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCV 85 (299)
T ss_dssp CCGGGEEEEEEEEC--CC--CEEEEEECSCC----CEEEEEEEECSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred cCHHHeEEeeEEeeCCCc--EEEEEEECCcccCCCCEEEEEEEeCCC--ChHHHHHHHHHHHHHHhCCCCCCccEEEEEe
Confidence 4556899999999999 9 99999875 35788999999753 3345677999999999999999999999998
Q ss_pred ecccccCCcccEEEEEecCC--cChHHHHHHhCc----------CCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCC
Q 004025 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGL----------EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCL 157 (778)
Q Consensus 90 ~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~----------~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp 157 (778)
++ ..+||||||| ++|.++|...+. ........+..++.||+.||.|||+ .+|+||||||
T Consensus 86 ~~--------~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~-~~iiHRDlKp 156 (299)
T 4asz_A 86 EG--------DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS-QHFVHRDLAT 156 (299)
T ss_dssp SS--------SSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSG
T ss_pred eC--------CEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCccCH
Confidence 64 3799999999 689999987531 1122344456679999999999996 8999999999
Q ss_pred CCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-
Q 004025 158 SSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS- 236 (778)
Q Consensus 158 ~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t- 236 (778)
+||+++.++.+||+|||+++........ .......++..|||||++.+ ..++.++|||||||++|||++
T Consensus 157 ~NILl~~~~~~Ki~DFGla~~~~~~~~~----~~~~~~~gt~~ymAPE~~~~------~~~~~k~DVwS~Gvvl~Ellt~ 226 (299)
T 4asz_A 157 RNCLVGENLLVKIGDFGMSRDVYSTDYY----RVGGHTMLPIRWMPPESIMY------RKFTTESDVWSLGVVLWEIFTY 226 (299)
T ss_dssp GGEEECGGGCEEECCCSCHHHHTGGGCE----EETTTEEECGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHTT
T ss_pred hhEEECCCCcEEECCcccceecCCCCce----eecCceecChhhcCHHHHcC------CCCCchhhHHHHHHHHHHHHcC
Confidence 9999999999999999999876542110 00111235568999999987 468899999999999999998
Q ss_pred CCCCCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHh
Q 004025 237 GMRLSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 237 g~~p~~~~~l~-------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
|+.||...... ....+|..+.+++.+||+.||.+||++.++++
T Consensus 227 G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~ 282 (299)
T 4asz_A 227 GKQPWYQLSNNEVIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHT 282 (299)
T ss_dssp TCCTTTTSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 88888642111 11356778999999999999999999998854
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-40 Score=359.64 Aligned_cols=241 Identities=15% Similarity=0.183 Sum_probs=185.1
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEEC-----CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEe
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSK-----DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k-----~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~ 90 (778)
...+|.+.++||.|+ | +||+|+.+ .++..||||++... .+...+.+.+|+++|++|+||||+++++++.+
T Consensus 39 ~~~d~~l~~~LG~G~fG--~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~ 114 (329)
T 4aoj_A 39 KRRDIVLKWELGEGAFG--KVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTMLQHQHIVRFFGVCTE 114 (329)
T ss_dssp CGGGEEEEEEEEECSSE--EEEEEEESSSCC---CEEEEEEEESCC--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred CHHHeEEEEEEccCCCc--EEEEEEECCcccCCCCeEEEEEEECcC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE
Confidence 334688899999998 8 99999865 36889999999753 34456779999999999999999999999986
Q ss_pred cccccCCcccEEEEEecCC--cChHHHHHHhCcC------------CCcchHHHHHHHHHHHHHHHHHHcCCCccccccC
Q 004025 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLE------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLk 156 (778)
+ ..+||||||| ++|.++|+..... .......+..++.||+.||.|||+ .+|||||||
T Consensus 115 ~--------~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~-~~iiHRDLK 185 (329)
T 4aoj_A 115 G--------RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG-LHFVHRDLA 185 (329)
T ss_dssp S--------SSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCC
T ss_pred C--------CEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc-CCeeccccc
Confidence 3 3799999999 6899999865421 112233455669999999999996 899999999
Q ss_pred CCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh
Q 004025 157 LSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS 236 (778)
Q Consensus 157 p~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t 236 (778)
|+||||+.++.+||+|||+++.+....... ......++..|||||++.+ ..++.++|||||||++|||++
T Consensus 186 p~NILl~~~~~~Ki~DFGla~~~~~~~~~~----~~~~~~gt~~ymAPE~~~~------~~~~~~sDvwS~Gvvl~Ellt 255 (329)
T 4aoj_A 186 TRNCLVGQGLVVKIGDFGMSRDIYSTDYYR----VGGRTMLPIRWMPPESILY------RKFTTESDVWSFGVVLWEIFT 255 (329)
T ss_dssp GGGEEEETTTEEEECCCC--------------------CCCCGGGCCHHHHTT------CCCCHHHHHHHHHHHHHHHHT
T ss_pred HhhEEECCCCcEEEcccccceeccCCCcce----ecCcccccccccChhhhcC------CCCCccccccchHHHHHHHHc
Confidence 999999999999999999998765432111 1112245568999999887 467889999999999999998
Q ss_pred -CCCCCChhhh-------------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 237 -GMRLSKTEEL-------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 237 -g~~p~~~~~l-------------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
|+.||..... .....+|+.+.+++.+||+.||.+||++.+++++
T Consensus 256 ~G~~Pf~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~ 313 (329)
T 4aoj_A 256 YGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHAR 313 (329)
T ss_dssp TSCCTTCSSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 8888853211 1123567789999999999999999999999865
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-40 Score=355.66 Aligned_cols=244 Identities=15% Similarity=0.188 Sum_probs=191.0
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEEC-----CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeE
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSK-----DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTE 89 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k-----~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e 89 (778)
+....+++.++||.|+ | +||+|+.+ .+++.||||++..... ....+.+++|+.+|++|+||||+++++++.
T Consensus 23 i~~~~~~~~~~lG~G~fG--~Vykg~~~~~~~~~~~~~VAvK~l~~~~~-~~~~~~f~~E~~il~~l~HpNIV~l~g~~~ 99 (308)
T 4gt4_A 23 ISLSAVRFMEELGEDRFG--KVYKGHLFGPAPGEQTQAVAIKTLKDKAE-GPLREEFRHEAMLRARLQHPNVVCLLGVVT 99 (308)
T ss_dssp CCGGGEEEEEEEEECSSC--EEEEEEEC-------CEEEEEEECCC-CC-C-CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred CCHHHCeEeeEeccCCCc--EEEEEEEcCCccCCCCeEEEEEEECcccC-hHHHHHHHHHHHHHHhCCCCCCCCcceEEE
Confidence 3444688899999999 9 99999864 4578999999975432 234567999999999999999999999998
Q ss_pred ecccccCCcccEEEEEecCC--cChHHHHHHhCcC-------------CCcchHHHHHHHHHHHHHHHHHHcCCCccccc
Q 004025 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154 (778)
Q Consensus 90 ~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~-------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~d 154 (778)
++ ..+||||||| ++|.++|...... .......+..++.||+.||.|||+ .+|||||
T Consensus 100 ~~--------~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~-~~iiHRD 170 (308)
T 4gt4_A 100 KD--------QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS-HHVVHKD 170 (308)
T ss_dssp SS--------SSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH-TTCCCSC
T ss_pred EC--------CEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh-CCCCCCC
Confidence 64 3789999999 6899999764321 112233455669999999999996 8999999
Q ss_pred cCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHH
Q 004025 155 VCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYEL 234 (778)
Q Consensus 155 Lkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel 234 (778)
|||+||||++++.+||+|||+++.+...... .......++..|||||++.+ ..++.++|||||||++|||
T Consensus 171 LK~~NILl~~~~~~Ki~DFGlar~~~~~~~~----~~~~~~~gt~~ymAPE~l~~------~~~s~ksDVwSfGvvl~El 240 (308)
T 4gt4_A 171 LATRNVLVYDKLNVKISDLGLFREVYAADYY----KLLGNSLLPIRWMAPEAIMY------GKFSIDSDIWSYGVVLWEV 240 (308)
T ss_dssp CSGGGEEECGGGCEEECCSCCBCGGGGGGCB----CSSSSSCBCGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHH
T ss_pred ccccceEECCCCCEEECCcccceeccCCCce----eEecccccCCcccCHHHHhC------CCCCccchhhhHHHHHHHH
Confidence 9999999999999999999999876542211 01112345568999999887 3688999999999999999
Q ss_pred Hh-CCCCCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 235 FS-GMRLSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 235 ~t-g~~p~~~~~l~-------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
++ |..||...... ....+|..+.+++.+||+.||.+||++.+++++-
T Consensus 241 ~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L 301 (308)
T 4gt4_A 241 FSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL 301 (308)
T ss_dssp HTTTCCTTTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HhCCCCCCCCCCHHHHHHHHHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 98 78887542111 1135677889999999999999999999998764
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=356.93 Aligned_cols=237 Identities=13% Similarity=0.139 Sum_probs=187.0
Q ss_pred CCceeccCCCCCC-CceEEEEeEEC---CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEeccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSK---DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENI 93 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k---~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~ 93 (778)
..|++.++||.|+ | +||+|+++ .+++.||||.+.... ....+.+|+++|+.+ .||||++++++++++
T Consensus 21 ~~Y~i~~~lG~G~fg--~Vy~a~~~~~~~~~~~vAiK~i~~~~----~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~-- 92 (361)
T 4f9c_A 21 NVFKIEDKIGEGTFS--SVYLATAQLQVGPEEKIALKHLIPTS----HPIRIAAELQCLTVAGGQDNVMGVKYCFRKN-- 92 (361)
T ss_dssp GTCEEEEEEEECSSE--EEEEEEEEBTTSCEEEEEEEEECTTS----CHHHHHHHHHHHHHTCSBTTBCCCSEEEEET--
T ss_pred CcEEEEEEEecccCc--EEEEEEEcccCCCCCEEEEEEEcccc----CHHHHHHHHHHHHHhcCCCCCceEEEEEEEC--
Confidence 4699999999999 8 99999875 457899999987542 234578899999998 599999999999874
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC-CcEEE
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT-LDWKL 170 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~-g~~KL 170 (778)
.++||||||| ++|.++++. .....++.+++||+.||.|||+ .+|+||||||+||+++.+ |.+||
T Consensus 93 ------~~~~lvmE~~~g~~L~~~~~~------l~~~~~~~~~~qll~al~ylH~-~gIiHRDiKPeNiLl~~~~~~~kl 159 (361)
T 4f9c_A 93 ------DHVVIAMPYLEHESFLDILNS------LSFQEVREYMLNLFKALKRIHQ-FGIVHRDVKPSNFLYNRRLKKYAL 159 (361)
T ss_dssp ------TEEEEEEECCCCCCHHHHHTT------CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEEETTTTEEEE
T ss_pred ------CEEEEEEeCCCcccHHHHHcC------CCHHHHHHHHHHHHHHHHHHHH-CCeEeCcCCHHHeEEeCCCCeEEE
Confidence 4999999999 579988853 2345577889999999999996 999999999999999876 89999
Q ss_pred EecccccccCCCCCCCC----------------------CCccccccccCCCCCCccccccccccccCCCCCcchhHHHH
Q 004025 171 HAFDVLSEFDGNNEAAN----------------------GPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLG 228 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~----------------------~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG 228 (778)
+|||+++...+...... ..-.....++++.|+|||++.+. ..++.++||||+|
T Consensus 160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-----~~y~~~~DiWSlG 234 (361)
T 4f9c_A 160 VDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKC-----PNQTTAIDMWSAG 234 (361)
T ss_dssp CCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTC-----SCCCTHHHHHHHH
T ss_pred CcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCC-----CCCCCccchhhhH
Confidence 99999986654221000 00001123466799999998763 4578899999999
Q ss_pred HHHHHHHhCCCCCCh-h----hhh--------------------------------------------------------
Q 004025 229 CLIYELFSGMRLSKT-E----ELR-------------------------------------------------------- 247 (778)
Q Consensus 229 ~liyel~tg~~p~~~-~----~l~-------------------------------------------------------- 247 (778)
|++|||++|..||.. . ++.
T Consensus 235 ~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~ 314 (361)
T 4f9c_A 235 VIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQG 314 (361)
T ss_dssp HHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC---------------
T ss_pred HHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhcccccccccccccccc
Confidence 999999999987731 1 000
Q ss_pred ------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+++.+.+++++||..||++|+|+.++|+||
T Consensus 315 ~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp 354 (361)
T 4f9c_A 315 HATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHP 354 (361)
T ss_dssp -------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSG
T ss_pred ccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCc
Confidence 0123566788999999999999999999999998
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-39 Score=374.36 Aligned_cols=239 Identities=13% Similarity=0.165 Sum_probs=196.3
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC----chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEe
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA----QDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~----~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~ 90 (778)
+.-.+|++.+.||.|+ | +||.|+++.+|+.||||++.+... ........++++.+++.++||||++++++|++
T Consensus 186 ~slddf~i~k~LG~G~fG--~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~ 263 (689)
T 3v5w_A 186 LTMNDFSVHRIIGRGGFG--EVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT 263 (689)
T ss_dssp CCGGGEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEEC
T ss_pred CchHHeEEEEEEecccCe--EEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEE
Confidence 3446799999999999 8 999999999999999999986421 11222333455778888999999999999997
Q ss_pred cccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcE
Q 004025 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDW 168 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~ 168 (778)
+ .++||||||| ++|..+|.+.+.. .+..++.++.||+.||.|||+ .+||||||||+|||++.+|.+
T Consensus 264 ~--------~~lylVmEy~~GGdL~~~l~~~~~l---~E~~a~~y~~qIl~aL~yLH~-~gIiHRDLKPeNILld~~G~v 331 (689)
T 3v5w_A 264 P--------DKLSFILDLMNGGDLHYHLSQHGVF---SEADMRFYAAEIILGLEHMHN-RFVVYRDLKPANILLDEHGHV 331 (689)
T ss_dssp S--------SEEEEEECCCCSCBHHHHHHHHCCC---CHHHHHHHHHHHHHHHHHHHT-TTEECCCCSGGGEEECTTSCE
T ss_pred C--------CEEEEEEecCCCCcHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHH-CCccccCCchHHeEEeCCCCE
Confidence 4 4899999999 5899999886542 345567779999999999995 999999999999999999999
Q ss_pred EEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh-
Q 004025 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR- 247 (778)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~- 247 (778)
||+|||+++.+.... ....++++.|||||++..+ ..|+.++|+|||||++|||++|.+||......
T Consensus 332 KL~DFGlA~~~~~~~--------~~t~~GTp~YmAPEvl~~~-----~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~ 398 (689)
T 3v5w_A 332 RISDLGLACDFSKKK--------PHASVGTHGYMAPEVLQKG-----VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 398 (689)
T ss_dssp EECCCTTCEECSSCC--------CCSCCSCGGGCCHHHHSTT-----CCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC
T ss_pred EecccceeeecCCCC--------CCCccCCcCccCHHHHhCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 999999998875421 2234677799999998643 46788999999999999999999999653211
Q ss_pred ----------c----cCCCCcchHHHHHHHhccCCCCCCC-----hHHHHhcc
Q 004025 248 ----------N----TASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENS 281 (778)
Q Consensus 248 ----------~----~~~iP~~L~~~i~~lL~~dP~~Rps-----~~~lL~~~ 281 (778)
. ...+++.+.+++.+||..||.+|++ ++++++|+
T Consensus 399 ~~~i~~~i~~~~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~Hp 451 (689)
T 3v5w_A 399 KHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESP 451 (689)
T ss_dssp HHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSG
T ss_pred HHHHHHhhcCCCCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCc
Confidence 1 1345667889999999999999998 69999998
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-39 Score=354.16 Aligned_cols=244 Identities=16% Similarity=0.182 Sum_probs=192.1
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCC-----CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCC-CCeeeEeeeeE
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDG-----SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRH-PNILAFLHSTE 89 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g-----~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrH-PnIlk~~d~~e 89 (778)
+..+|++++.||.|+ | +||+|+++..+ +.||||.+.... .....+.+.+|+++|++|+| |||+++++++.
T Consensus 62 ~~~~~~l~~~LG~G~fG--~Vy~a~~~~~~~~~~~k~VAvK~l~~~~-~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~ 138 (353)
T 4ase_A 62 PRDRLKLGKPLGRGAFG--QVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACT 138 (353)
T ss_dssp CGGGEEEEEEEEECSSE--EEEEEEEETSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cHHHeEEeeEEecCCCe--EEEEEEEcCCCcccCCeEEEEEEEcccc-ChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEE
Confidence 334688999999999 8 99999987544 579999997643 33446678999999999975 99999999986
Q ss_pred ecccccCCcccEEEEEecCC--cChHHHHHHhCc-------------CCCcchHHHHHHHHHHHHHHHHHHcCCCccccc
Q 004025 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGL-------------EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154 (778)
Q Consensus 90 ~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~-------------~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~d 154 (778)
.++ ..+||||||| ++|.++|+.... ........+..++.||+.||.|||+ .+|||||
T Consensus 139 ~~~-------~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~-~~iiHRD 210 (353)
T 4ase_A 139 KPG-------GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS-RKCIHRD 210 (353)
T ss_dssp CTT-------SCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH-TTCCCSC
T ss_pred ecC-------CEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh-CCeecCc
Confidence 532 3689999999 689999986432 1112234455669999999999996 8999999
Q ss_pred cCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHH
Q 004025 155 VCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYEL 234 (778)
Q Consensus 155 Lkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel 234 (778)
|||+||+++++|.+||+|||+++.+..... ........++..|||||++.+ ..++.++|||||||++|||
T Consensus 211 LK~~NILl~~~~~vKi~DFGlar~~~~~~~----~~~~~~~~gt~~ymAPE~l~~------~~y~~ksDVwS~Gv~l~El 280 (353)
T 4ase_A 211 LAARNILLSEKNVVKICDFGLARDIYKDPD----YVRKGDARLPLKWMAPETIFD------RVYTIQSDVWSFGVLLWEI 280 (353)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTT----SEEETTEEECGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHH
T ss_pred cCccceeeCCCCCEEECcchhhhhcccCCC----ceeeccccccccccCHHHHhc------CCCCCcccEeehHHHHHHH
Confidence 999999999999999999999987754321 111122345568999999987 4688999999999999999
Q ss_pred Hh-CCCCCChhh----h----h------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 235 FS-GMRLSKTEE----L----R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 235 ~t-g~~p~~~~~----l----~------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
++ |..||.... + . ....+|+.+.+++.+||+.||.+|||+.++++|-
T Consensus 281 ~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L 342 (353)
T 4ase_A 281 FSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 342 (353)
T ss_dssp TTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HhCCCCCCCCCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHH
Confidence 98 888885421 1 1 1134567789999999999999999999999874
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=372.23 Aligned_cols=234 Identities=19% Similarity=0.276 Sum_probs=196.5
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++++.||.|+ | +||+|+++.+|+.||||++.+.. ....+.+++|+++|+.|+||||++++++|+++
T Consensus 158 ~Y~i~~~lG~G~fg--~V~~~~~~~tg~~~AiK~i~~~~--~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~------- 226 (573)
T 3uto_A 158 HYDIHEELGTGAFG--VVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDD------- 226 (573)
T ss_dssp TEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECS-------
T ss_pred ccEEEEEEeeccCe--EEEEEEECCCCCEEEEEEEeccc--hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEEC-------
Confidence 699999999998 8 99999999999999999998653 23456789999999999999999999999874
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC--CcEEEEecc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT--LDWKLHAFD 174 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~--g~~KL~dFg 174 (778)
.++||||||| ++|.++|.... ....+..++.++.||+.||.|||+ .+|+||||||+||+++.+ |.+||+|||
T Consensus 227 -~~~~iv~E~~~gg~L~~~i~~~~--~~l~e~~~~~~~~qi~~al~ylH~-~~iiHRDlKp~Nill~~~~~~~vKl~DFG 302 (573)
T 3uto_A 227 -NEMVMIYEFMSGGELFEKVADEH--NKMSEDEAVEYMRQVCKGLCHMHE-NNYVHLDLKPENIMFTTKRSNELKLIDFG 302 (573)
T ss_dssp -SEEEEEEECCCCCBHHHHHTCTT--SCEEHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEESSSSCCCEEECCCS
T ss_pred -CEEEEEEeecCCCcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHH-CCeeeccCChhhccccCCCCCCEEEeecc
Confidence 4899999999 58999886432 123455577789999999999996 899999999999999854 899999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----hc--
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN-- 248 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~~-- 248 (778)
+++.+.... .....+++..|||||++.+ ..++.++|||||||++|||++|.+||..... ..
T Consensus 303 ~a~~~~~~~-------~~~~~~GT~~y~APEv~~~------~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~ 369 (573)
T 3uto_A 303 LTAHLDPKQ-------SVKVTTGTAEFAAPEVAEG------KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVK 369 (573)
T ss_dssp SCEECCTTS-------EEEEECSSGGGCCHHHHTT------CCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHH
T ss_pred ceeEccCCC-------ceeeeEECccccCHHHhCC------CCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHH
Confidence 999876431 1123356679999999987 4678899999999999999999999864321 11
Q ss_pred ----------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ----------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++++||..||.+||++.++|+|+
T Consensus 370 ~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hp 412 (573)
T 3uto_A 370 SCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHP 412 (573)
T ss_dssp TTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHST
T ss_pred hCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCc
Confidence 134677788999999999999999999999998
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-38 Score=340.99 Aligned_cols=244 Identities=13% Similarity=0.171 Sum_probs=180.6
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|.++++||.|+ | +||+|++ +|+.||||++.... ........|+..+..|+||||+++++++..++..
T Consensus 4 ~i~L~~~iG~G~fG--~Vy~~~~--~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~---- 72 (303)
T 3hmm_A 4 TIVLQESIGKGRFG--EVWRGKW--RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGT---- 72 (303)
T ss_dssp GEEEEEEEEECSSS--EEEEEEE--TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSS----
T ss_pred EEEEEEEEeeCCCe--EEEEEEE--CCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCC----
Confidence 489999999999 9 9999998 48999999997532 2223345688888899999999999999865422
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCC-------CccccccCCCCeEEcCCCcEE
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDC-------KLVHGNVCLSSVVVTQTLDWK 169 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~-------~ivH~dLkp~NI~v~~~g~~K 169 (778)
...+||||||| ++|.++|+..... .+....++.|++.||.|||+.+ +|+||||||+|||++.+|.+|
T Consensus 73 ~~~~~lV~Ey~~~gsL~~~l~~~~l~----~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~K 148 (303)
T 3hmm_A 73 WTQLWLVSDYHEHGSLFDYLNRYTVT----VEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC 148 (303)
T ss_dssp SEEEEEEEECCTTCBHHHHHHHCCBC----HHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEE
T ss_pred ceEEEEEecCCCCCcHHHHHHhCCCC----HHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEE
Confidence 34799999999 6899999876532 3334456889999999999632 899999999999999999999
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh-----
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----- 244 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~----- 244 (778)
|+|||+++......... ........++..|||||++.+........++.++|||||||++|||++|.+++...
T Consensus 149 i~DFGla~~~~~~~~~~--~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~ 226 (303)
T 3hmm_A 149 IADLGLAVRHDSATDTI--DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL 226 (303)
T ss_dssp ECCCTTCEEEETTTTEE--SCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCC
T ss_pred EEeCCCCccccCCCCce--eeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccc
Confidence 99999998775432111 01112235667999999987632111112456899999999999999997654211
Q ss_pred -------------hhhc-------cCCCCc---------chHHHHHHHhccCCCCCCChHHHHhc
Q 004025 245 -------------ELRN-------TASIPK---------SLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 245 -------------~l~~-------~~~iP~---------~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
.+.. ...+|. .+.+++.+||..||.+|||+.++++.
T Consensus 227 p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~ 291 (303)
T 3hmm_A 227 PYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT 291 (303)
T ss_dssp TTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred cchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence 1100 123443 35678899999999999999998864
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-37 Score=335.05 Aligned_cols=238 Identities=19% Similarity=0.265 Sum_probs=198.6
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
-.+|++.+.||.|+ | +||.|+++.+|+.|+||++.+........+.+.+|+++|+.++||||++++++++++
T Consensus 14 ~~~y~~~~~lG~G~~g--~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~----- 86 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFA--KVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETE----- 86 (328)
T ss_dssp ETTEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECS-----
T ss_pred cCCEEEEEEEeeCCCE--EEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC-----
Confidence 34799999999998 8 999999999999999999987655555677889999999999999999999999864
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+|+||||+ ++|.+++...+. .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 87 ---~~~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~al~~lH~-~~ivHrDlkp~NIll~~~~~~kl~DFG 159 (328)
T 3fe3_A 87 ---KTLYLIMEYASGGEVFDYLVAHGR---MKEKEARSKFRQIVSAVQYCHQ-KRIVHRDLKAENLLLDADMNIKIADFG 159 (328)
T ss_dssp ---SEEEEEECCCTTCBHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEECTTSCEEECSTT
T ss_pred ---CEEEEEEECCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCEeccCCCHHHEEEcCCCCEEEeecc
Confidence 4899999999 579999877643 2344466679999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------ 248 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~------ 248 (778)
++........ .....++..|+|||++.+. ...+.++|+|||||++|+|++|..||.......
T Consensus 160 ~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~~-----~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~ 227 (328)
T 3fe3_A 160 FSNEFTVGGK-------LDAFCGAPPYAAPELFQGK-----KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 227 (328)
T ss_dssp CCGGGSSSCG-------GGTTSSSGGGCCHHHHHTC-----CCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred CceecCCCCc-------cccccCCcceeCcccccCC-----CcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9987654211 1223456689999998763 233468999999999999999999986543221
Q ss_pred --c----CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 --T----ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 --~----~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ..++..+.+++++||..||.+||++.++++|+
T Consensus 228 ~~~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~ 266 (328)
T 3fe3_A 228 RGKYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDR 266 (328)
T ss_dssp HCCCCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCT
T ss_pred hCCCCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcCH
Confidence 1 23566788999999999999999999999998
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=324.07 Aligned_cols=238 Identities=18% Similarity=0.247 Sum_probs=193.7
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.||.|+ | +||+|+++.+|+.|+||++............+.+|+++++.++||||++++++++.+
T Consensus 3 ~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------- 73 (292)
T 3o0g_A 3 KYEKLEKIGEGTYG--TVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD------- 73 (292)
T ss_dssp SEEEEEEEEECSSS--EEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEET-------
T ss_pred CceeeeEecCCCCe--EEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeC-------
Confidence 699999999998 8 999999999999999999987665556667888999999999999999999999874
Q ss_pred ccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 99 ~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
..+||||||+ ++|..++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++.
T Consensus 74 -~~~~lv~e~~~~~l~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lH~-~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~ 149 (292)
T 3o0g_A 74 -KKLTLVFEFCDQDLKKYFDSCNG--DLDPEIVKSFLFQLLKGLGFCHS-RNVLHRDLKPQNLLINRNGELKLANFGLAR 149 (292)
T ss_dssp -TEEEEEEECCSEEHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred -CEEEEEEecCCCCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCCCEEEeecccce
Confidence 4899999999 567777765332 23345567779999999999996 899999999999999999999999999998
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCC-CChhh----hhc----
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL-SKTEE----LRN---- 248 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p-~~~~~----l~~---- 248 (778)
........ .....++..|+|||++.+. ..++.++|+|||||++|+|++|+.| |.... +..
T Consensus 150 ~~~~~~~~------~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~ 218 (292)
T 3o0g_A 150 AFGIPVRC------YSAEVVTLWYRPPDVLFGA-----KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRL 218 (292)
T ss_dssp ECCSCCSC------CCSCCSCGGGCCHHHHTTC-----SCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHH
T ss_pred ecCCcccc------ccCCccccCCcChHHHcCC-----CCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHH
Confidence 76532111 1122345589999998763 3468899999999999999987765 32211 000
Q ss_pred ---------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ---------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ---------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++++||..||.+||++.++++|+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 284 (292)
T 3o0g_A 219 LGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHP 284 (292)
T ss_dssp HCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred hCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCc
Confidence 013566778999999999999999999999998
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-37 Score=330.66 Aligned_cols=248 Identities=17% Similarity=0.290 Sum_probs=188.0
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.||.|+ | +||+|+++.+|+.|+||++...... .....+.+|+++|+.|+||||++++++++.+
T Consensus 5 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~------ 75 (317)
T 2pmi_A 5 SQFKQLEKLGNGTYA--TVYKGLNKTTGVYVALKEVKLDSEE-GTPSTAIREISLMKELKHENIVRLYDVIHTE------ 75 (317)
T ss_dssp --------------C--EEEEEECSSSCCEEEEEEEECCSTT-CSCHHHHHHHHHHTTCCBTTBCCEEEEECCT------
T ss_pred cceeEeeEECCCCCE--EEEEEEECCCCcEEEEEEeeccccc-ccHHHHHHHHHHHHhcCCCCcceEEEEEEEC------
Confidence 4799999999998 8 9999999999999999999865322 2345678999999999999999999999864
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcC---CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLE---GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~---~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..+||||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+||
T Consensus 76 --~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~-~~ivH~Dlkp~NIl~~~~~~~kl~Df 152 (317)
T 2pmi_A 76 --NKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE-NKILHRDLKPQNLLINKRGQLKLGDF 152 (317)
T ss_dssp --TEEEEEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEECTTCCEEECCC
T ss_pred --CeEEEEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH-CCeeeCCCChHHeEEcCCCCEEECcC
Confidence 4899999999 6799988765321 123345567779999999999996 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----hc-
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN- 248 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~~- 248 (778)
|++......... .....++..|+|||++.+. ..++.++|+|||||++|||++|.+||..... ..
T Consensus 153 g~~~~~~~~~~~------~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i 221 (317)
T 2pmi_A 153 GLARAFGIPVNT------FSSEVVTLWYRAPDVLMGS-----RTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLI 221 (317)
T ss_dssp SSCEETTSCCCC------CCCCCSCCTTCCHHHHTTC-----CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred ccceecCCCccc------CCCCcccccccCchHhhCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence 999876532111 1122446689999998753 3567899999999999999999998853210 00
Q ss_pred -----------------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcccCCccc
Q 004025 249 -----------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWM 287 (778)
Q Consensus 249 -----------------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~ 287 (778)
...++..+.+++.+||..||.+||++.++++|+ |+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp----~f 297 (317)
T 2pmi_A 222 FDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHP----WF 297 (317)
T ss_dssp HHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSG----GG
T ss_pred HHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCCh----hh
Confidence 013566788999999999999999999999999 77
Q ss_pred cccccc
Q 004025 288 TEYFQN 293 (778)
Q Consensus 288 ~~ff~n 293 (778)
..++..
T Consensus 298 ~~~~~~ 303 (317)
T 2pmi_A 298 AEYYHH 303 (317)
T ss_dssp GGGCC-
T ss_pred hcccch
Confidence 766654
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-36 Score=343.12 Aligned_cols=249 Identities=16% Similarity=0.195 Sum_probs=186.7
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.||.|+ | +||+|+++.+|+.||||++..........+.+.+|+++|+.|+||||+++++++.....+
T Consensus 53 ~~y~~~~~lG~G~~g--~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--- 127 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYG--HVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVE--- 127 (458)
T ss_dssp TTEEECCC---------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTT---
T ss_pred CCeEEeeEeeecCCe--EEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcc---
Confidence 4799999999998 8 899999999999999999987655555677889999999999999999999999643211
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
....+||||||+ ++|..+++.... .....++.+++||+.||.|||+ .+|+||||||+||+|+.+|.+||+|||++
T Consensus 128 ~~~~~~lv~e~~~~~L~~~~~~~~~---l~~~~~~~~~~qi~~aL~~LH~-~~iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 128 KFDELYVVLEIADSDFKKLFRTPVY---LTELHIKTLLYNLLVGVKYVHS-AGILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp TCCCEEEEECCCSEEHHHHHHSSCC---CCHHHHHHHHHHHHHHHHHHHH-TTCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred cCceEEEEEeccccchhhhcccCCC---CCHHHHHHHHHHHHHHHHHHHh-CCcCCCCCChhhEEECCCCCEeecccccc
Confidence 134799999999 579888876432 2344567779999999999996 89999999999999999999999999999
Q ss_pred cccCCCCCCCCC-C--------------------ccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHH
Q 004025 177 SEFDGNNEAANG-P--------------------MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELF 235 (778)
Q Consensus 177 ~~~~~~~~~~~~-~--------------------~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~ 235 (778)
+........... + .......++..|+|||++... ..++.++|||||||++|||+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----~~~~~~~DiwSlG~il~ell 278 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQ-----ENYTEAIDVWSIGCIFAELL 278 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTC-----CCCCTHHHHHHHHHHHHHHH
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCC-----CCCCcHhHHHHHHHHHHHHH
Confidence 877543211000 0 011233456689999987542 46788999999999999999
Q ss_pred h-----------CCCCCChhh------------------------hh---------------------------------
Q 004025 236 S-----------GMRLSKTEE------------------------LR--------------------------------- 247 (778)
Q Consensus 236 t-----------g~~p~~~~~------------------------l~--------------------------------- 247 (778)
+ |+++|.... +.
T Consensus 279 tg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~ 358 (458)
T 3rp9_A 279 NMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKRE 358 (458)
T ss_dssp TTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCC
T ss_pred HhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCC
Confidence 8 566663321 00
Q ss_pred ------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++++||..||.+||++.++|+|+
T Consensus 359 ~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp 398 (458)
T 3rp9_A 359 GTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHP 398 (458)
T ss_dssp CCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred CCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCH
Confidence 0123466788999999999999999999999998
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-36 Score=337.23 Aligned_cols=251 Identities=17% Similarity=0.288 Sum_probs=193.4
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecccccC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~g~ 96 (778)
.+|++.+.||.|+ | +||+|+++.+|+.||||++............+.+|+.+|+.++ ||||+++++++..++
T Consensus 9 ~~y~~~~~lG~G~~g--~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~---- 82 (388)
T 3oz6_A 9 RKYELVKKLGKGAYG--IVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADN---- 82 (388)
T ss_dssp TTEEEEEC---------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTT----
T ss_pred CceEEEEEeeeCCCe--EEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCC----
Confidence 4799999999998 8 8999999999999999999765555556677889999999998 999999999998654
Q ss_pred CcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 97 ~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
...+||||||| ++|..+++.... ....+..+++||+.||.|||+ .+|+||||||+||+++.+|.+||+|||+
T Consensus 83 --~~~~~lv~e~~~~~L~~~~~~~~~----~~~~~~~i~~qi~~~L~~LH~-~~ivHrDlkp~NIll~~~~~~kl~DFG~ 155 (388)
T 3oz6_A 83 --DRDVYLVFDYMETDLHAVIRANIL----EPVHKQYVVYQLIKVIKYLHS-GGLLHRDMKPSNILLNAECHVKVADFGL 155 (388)
T ss_dssp --SSCEEEEEECCSEEHHHHHHHTCC----CHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred --CCEEEEEecccCcCHHHHHHcCCC----CHHHHHHHHHHHHHHHHHHHh-CCEEeCCCCHHHeEEcCCCCEEecCCcc
Confidence 34799999999 679888877432 344466679999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCC---------------CCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCC
Q 004025 176 LSEFDGNNEAAN---------------GPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL 240 (778)
Q Consensus 176 a~~~~~~~~~~~---------------~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p 240 (778)
++.+........ .........++..|+|||++.+. ..++.++|+|||||++|||++|.+|
T Consensus 156 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~~DiwSlG~il~ell~g~~p 230 (388)
T 3oz6_A 156 SRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGS-----TKYTKGIDMWSLGCILGEILCGKPI 230 (388)
T ss_dssp CEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTC-----CCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred cccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCC-----CCCCChhhHHHHHHHHHHHHhCCCC
Confidence 987643211100 00011223455689999998763 4678899999999999999999998
Q ss_pred CChhhh----hc-------------------------------------------------------cCCCCcchHHHHH
Q 004025 241 SKTEEL----RN-------------------------------------------------------TASIPKSLLPDYQ 261 (778)
Q Consensus 241 ~~~~~l----~~-------------------------------------------------------~~~iP~~L~~~i~ 261 (778)
|..... .. ...++..+.++++
T Consensus 231 f~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~ 310 (388)
T 3oz6_A 231 FPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLD 310 (388)
T ss_dssp CCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHH
Confidence 853210 00 0145677889999
Q ss_pred HHhccCCCCCCChHHHHhcccCCccccccc
Q 004025 262 RLLSSMPSRRLNSSKLIENSVGDFWMTEYF 291 (778)
Q Consensus 262 ~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff 291 (778)
+||..||.+||++.++++|+ |+..|.
T Consensus 311 ~~L~~dP~~R~t~~e~l~Hp----~~~~~~ 336 (388)
T 3oz6_A 311 KLLQFNPNKRISANDALKHP----FVSIFH 336 (388)
T ss_dssp HHCCSSGGGSCCHHHHTTST----TTTTTC
T ss_pred HhhccCcccCCCHHHHhCCH----HHHHhc
Confidence 99999999999999999999 665443
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-36 Score=325.13 Aligned_cols=236 Identities=17% Similarity=0.228 Sum_probs=196.4
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|++.+.||.|+ | +||+|+++.+|+.|+||++...... ..+.+.+|+.+++.++||||+++++++...
T Consensus 18 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~---- 89 (297)
T 3fxz_A 18 PKKKYTRFEKIGQGASG--TVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVG---- 89 (297)
T ss_dssp GGGTBCCCEEEEEETTE--EEEEEEBTTTCCEEEEEEEEGGGCS--CHHHHHHHHHHHHHCCCTTBCCEEEEEEET----
T ss_pred hhhceeeeeeeccCCCe--EEEEEEECCCCcEEEEEEeeccccc--HHHHHHHHHHHHhcCCCCCCCeEeEEEEEC----
Confidence 556899999999998 8 9999999999999999999864332 245688999999999999999999999874
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..+||||||| ++|.+++..... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+||
T Consensus 90 ----~~~~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~qi~~~l~~lH~-~~i~H~Dlkp~Nil~~~~~~~kl~Df 160 (297)
T 3fxz_A 90 ----DELWVVMEYLAGGSLTDVVTETCM----DEGQIAAVCRECLQALEFLHS-NQVIHRDIKSDNILLGMDGSVKLTDF 160 (297)
T ss_dssp ----TEEEEEEECCTTCBHHHHHHHSCC----CHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECTTCCEEECCC
T ss_pred ----CEEEEEEECCCCCCHHHHHhhcCC----CHHHHHHHHHHHHHHHHHHHh-CCceeCCCCHHHEEECCCCCEEEeeC
Confidence 3899999999 579999987542 344566779999999999996 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------- 246 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l------- 246 (778)
|++......... .....++..|+|||++.+ ..++.++|+|||||++|||++|..||.....
T Consensus 161 g~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~ 228 (297)
T 3fxz_A 161 GFCAQITPEQSK------RSTMVGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI 228 (297)
T ss_dssp TTCEECCSTTCC------BCCCCSCGGGCCHHHHHC------SCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH
T ss_pred CCceecCCcccc------cCCccCCcCccChhhhcC------CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 998876543211 122345568999999876 3567899999999999999999999854321
Q ss_pred --------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 --------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 --------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....++..+.+++.+||..||.+||++.++++|+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~ 271 (297)
T 3fxz_A 229 ATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQ 271 (297)
T ss_dssp HHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCG
T ss_pred HhCCCCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhCh
Confidence 11234667789999999999999999999999998
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-36 Score=321.57 Aligned_cols=238 Identities=15% Similarity=0.241 Sum_probs=190.7
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.||.|+ | +||+|++ .+|+.|+||++............+.+|+++++.++||||++++++++.+
T Consensus 2 ~~y~~~~~lg~G~~g--~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------ 72 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYG--VVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTK------ 72 (288)
T ss_dssp CSEEEEEEEEEETTE--EEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECS------
T ss_pred ccchhhhhcccCCCE--EEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccC------
Confidence 3699999999998 8 9999998 5799999999986544444456788999999999999999999999864
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 73 --~~~~lv~e~~~~~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 147 (288)
T 1ob3_A 73 --KRLVLVFEHLDQDLKKLLDVCEG--GLESVTAKSFLLQLLNGIAYCHD-RRVLHRDLKPQNLLINREGELKIADFGLA 147 (288)
T ss_dssp --SCEEEEEECCSEEHHHHHHTSTT--CCCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEECTTSCEEECCTTHH
T ss_pred --CeEEEEEEecCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEEcCCCCEEEeECccc
Confidence 3899999999 578888875421 12344566779999999999996 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hhc----
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRN---- 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~~---- 248 (778)
......... .....++..|+|||++.+. ..++.++|+|||||++|||++|.+||.... +..
T Consensus 148 ~~~~~~~~~------~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 216 (288)
T 1ob3_A 148 RAFGIPVRK------YTHEIVTLWYRAPDVLMGS-----KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRI 216 (288)
T ss_dssp HHHCC---------------CCCTTCCHHHHTTC-----CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred cccCccccc------cccccccccccCchheeCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 876532110 1122445689999998653 356789999999999999999999885321 000
Q ss_pred ---------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ---------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ---------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++++||..||.+||++.++++|+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 282 (288)
T 1ob3_A 217 LGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHA 282 (288)
T ss_dssp HCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSG
T ss_pred HCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCc
Confidence 023566778999999999999999999999998
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-36 Score=323.23 Aligned_cols=240 Identities=17% Similarity=0.255 Sum_probs=190.8
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|++.+.||.|+ | +||+|+++ +|+.|+||++............+.+|+++|++++||||++++++++++
T Consensus 19 l~~~y~~~~~lG~G~~g--~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~---- 91 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYG--VVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSE---- 91 (311)
T ss_dssp SSCEEEEEEEEEECSSC--EEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCS----
T ss_pred hHhhhHhhhhccCCCCe--EEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccC----
Confidence 345799999999998 8 99999986 599999999986554445567788999999999999999999999864
Q ss_pred CCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+||||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 92 ----~~~~lv~e~~~~~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~LH~-~~ivH~Dikp~NIl~~~~~~~kl~Dfg 164 (311)
T 3niz_A 92 ----RCLTLVFEFMEKDLKKVLDENKT--GLQDSQIKIYLYQLLRGVAHCHQ-HRILHRDLKPQNLLINSDGALKLADFG 164 (311)
T ss_dssp ----SCEEEEEECCSEEHHHHHHTCTT--CCCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred ----CEEEEEEcCCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCchHhEEECCCCCEEEccCc
Confidence 4899999999 578888776432 12344566779999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hhc--
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRN-- 248 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~~-- 248 (778)
++......... .....++..|+|||++.+. ..++.++|+|||||++|+|++|.+||.... +..
T Consensus 165 ~a~~~~~~~~~------~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~ 233 (311)
T 3niz_A 165 LARAFGIPVRS------YTHEVVTLWYRAPDVLMGS-----KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIF 233 (311)
T ss_dssp TCEETTSCCC---------CCCCCCTTCCHHHHTTC-----CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHH
T ss_pred CceecCCCccc------ccCCcccCCcCCHHHhcCC-----CCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence 99876532111 1122446689999998753 356789999999999999999998885311 000
Q ss_pred ------------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ------------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+++.+.+++++||..||.+|||+.++++|+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 302 (311)
T 3niz_A 234 SILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHP 302 (311)
T ss_dssp HHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSG
T ss_pred HHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCc
Confidence 113456678899999999999999999999998
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-36 Score=326.75 Aligned_cols=238 Identities=16% Similarity=0.197 Sum_probs=195.5
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
..+|++.+.||.|+ | +||.|+++.+|+.|+||++.+... .......+.+|+++|+.++||||+++++++++.
T Consensus 4 ~~~y~~~~~lG~G~fg--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~---- 77 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFG--KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH---- 77 (337)
T ss_dssp GGGEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECS----
T ss_pred hHHeEEEEEEecCCCe--EEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeC----
Confidence 35799999999998 8 999999999999999999975321 113356788999999999999999999999874
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..+||||||| ++|..++...... ....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+||
T Consensus 78 ----~~~~lv~E~~~gg~L~~~l~~~~~~---~~~~~~~~~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~g~vkL~DF 149 (337)
T 1o6l_A 78 ----DRLCFVMEYANGGELFFHLSRERVF---TEERARFYGAEIVSALEYLHS-RDVVYRDIKLENLMLDKDGHIKITDF 149 (337)
T ss_dssp ----SEEEEEEECCTTCBHHHHHHHHSCC---CHHHHHHHHHHHHHHHHHHHH-TTCBCCCCCGGGEEECTTSCEEECCC
T ss_pred ----CEEEEEEeCCCCCcHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeecCcCCHHHEEECCCCCEEEeec
Confidence 4899999999 4799998876432 344566779999999999996 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------ 247 (778)
|++........ ......++..|+|||++.+ ..++.++|+|||||++|||++|..||......
T Consensus 150 G~a~~~~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i 217 (337)
T 1o6l_A 150 GLCKEGISDGA------TMKTFCGTPEYLAPEVLED------NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 217 (337)
T ss_dssp TTCBCSCCTTC------CBCCCEECGGGCCGGGGSS------SCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred cchhhcccCCC------cccccccChhhCChhhhcC------CCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHH
Confidence 99986433211 1122345668999999876 35778999999999999999999998643211
Q ss_pred --c----cCCCCcchHHHHHHHhccCCCCCC-----ChHHHHhcc
Q 004025 248 --N----TASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENS 281 (778)
Q Consensus 248 --~----~~~iP~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~ 281 (778)
. ...++..+.+++++||..||.+|+ ++.++++|+
T Consensus 218 ~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~ 262 (337)
T 1o6l_A 218 LMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHR 262 (337)
T ss_dssp HHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSG
T ss_pred HcCCCCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCC
Confidence 1 134667789999999999999999 899999998
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=332.83 Aligned_cols=237 Identities=17% Similarity=0.209 Sum_probs=194.2
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
.+|.+.+.||.|+ | +||+|+++.+|+.|+||++.+..... .....+.+|+++|+.++||||+++++++++.
T Consensus 9 ~~Y~i~~~lG~G~~g--~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~----- 81 (336)
T 3h4j_B 9 GPYIIRETLGEGSFG--KVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTP----- 81 (336)
T ss_dssp TTEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECS-----
T ss_pred CCEEEEEEEecCCCe--EEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC-----
Confidence 4799999999998 8 99999999999999999997532111 2234688999999999999999999999874
Q ss_pred CcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 97 ~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+||||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 82 ---~~~~lv~E~~~g~l~~~l~~~~~---l~~~~~~~i~~qi~~aL~~LH~-~givH~Dlkp~NIll~~~~~~kl~DFG~ 154 (336)
T 3h4j_B 82 ---TDIVMVIEYAGGELFDYIVEKKR---MTEDEGRRFFQQIICAIEYCHR-HKIVHRDLKPENLLLDDNLNVKIADFGL 154 (336)
T ss_dssp ---SEEEEEECCCCEEHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHH-HTCCCCCCSTTTEEECTTCCEEECCSSC
T ss_pred ---CEEEEEEECCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeEecCCchhhEEEcCCCCEEEEEecc
Confidence 4899999999 578888876543 2344466679999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhcc------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT------ 249 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~~------ 249 (778)
+........ .....++..|+|||++.+. ...+.++|+|||||++|+|++|..||........
T Consensus 155 s~~~~~~~~-------~~~~~gt~~y~aPE~~~~~-----~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~ 222 (336)
T 3h4j_B 155 SNIMTDGNF-------LKTSCGSPNYAAPEVINGK-----LYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNS 222 (336)
T ss_dssp TBTTTTSBT-------TCCCTTSTTTSCGGGSCCS-----GGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCS
T ss_pred ceeccCCcc-------cccccCCcCcCCHHHHcCC-----CCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHc
Confidence 987654221 1223456799999998763 2235689999999999999999999875433221
Q ss_pred ------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 250 ------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 250 ------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
..++..+.+++++||..||.+||++.++++|+
T Consensus 223 ~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 260 (336)
T 3h4j_B 223 CVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDP 260 (336)
T ss_dssp SCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCH
T ss_pred CCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhCh
Confidence 23566788999999999999999999999998
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=327.91 Aligned_cols=237 Identities=19% Similarity=0.209 Sum_probs=196.5
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch----hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD----GHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~----~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~ 92 (778)
...|++++.||.|+ | +||+|+++.+|+.|+||++.+..... ...+.+.+|+.+|+.|+||||+++++++++.
T Consensus 11 ~~~y~~~~~LG~G~fg--~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~- 87 (361)
T 2yab_A 11 EDFYDIGEELGSGQFA--IVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENR- 87 (361)
T ss_dssp GGTEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECS-
T ss_pred hhceEEeeEEeeCcCE--EEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeC-
Confidence 34699999999998 8 99999999999999999998754322 2356789999999999999999999999864
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC----
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL---- 166 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g---- 166 (778)
..+||||||| ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.++
T Consensus 88 -------~~~~lv~e~~~gg~L~~~l~~~~~---l~~~~~~~i~~qi~~aL~~LH~-~givHrDlkp~NIll~~~~~~~~ 156 (361)
T 2yab_A 88 -------TDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHT-KKIAHFDLKPENIMLLDKNIPIP 156 (361)
T ss_dssp -------SEEEEEEECCCSCBHHHHHTTCSC---CBHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEESCTTSSSC
T ss_pred -------CEEEEEEEcCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEEeCCCCCcc
Confidence 4899999999 579999865432 3445567779999999999996 8999999999999998877
Q ss_pred cEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh
Q 004025 167 DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL 246 (778)
Q Consensus 167 ~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l 246 (778)
.+||+|||++..+..... .....++..|+|||++.+ ..++.++|+|||||++|+|++|.+||.....
T Consensus 157 ~vkl~DFG~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~ 223 (361)
T 2yab_A 157 HIKLIDFGLAHEIEDGVE-------FKNIFGTPEFVAPEIVNY------EPLGLEADMWSIGVITYILLSGASPFLGDTK 223 (361)
T ss_dssp CEEECCCSSCEECCTTCC-------CCCCCSCGGGCCHHHHTT------CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH
T ss_pred CEEEEecCCceEcCCCCc-------cccCCCCccEECchHHcC------CCCCccccHHHHHHHHHHHHhCCCCCCCCCH
Confidence 799999999987754211 112345568999999876 3677899999999999999999999854321
Q ss_pred ----hc------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 ----RN------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ----~~------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. ...++..+.+++++||..||.+||++.++++|+
T Consensus 224 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp 274 (361)
T 2yab_A 224 QETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHP 274 (361)
T ss_dssp HHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTST
T ss_pred HHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 11 135677789999999999999999999999998
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-36 Score=321.51 Aligned_cols=247 Identities=18% Similarity=0.270 Sum_probs=189.8
Q ss_pred CCCCCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch------------------------hHHHHHH
Q 004025 13 GAGVKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD------------------------GHLAAAR 67 (778)
Q Consensus 13 ~~~~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~------------------------~~~~~~~ 67 (778)
+..+...+|++.+.||.|+ | +||+|+++.+|+.|+||++....... ...+.+.
T Consensus 7 ~~~~~~~~y~~~~~lG~G~~g--~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (298)
T 2zv2_A 7 GDCVQLNQYTLKDEIGKGSYG--VVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVY 84 (298)
T ss_dssp ---CEETTEEEEEEEEC--CC--EEEEEEETTTTEEEEEEEEECC-------------------------------CHHH
T ss_pred CCceeecceEEEeEEeecCCE--EEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHH
Confidence 3334456899999999998 8 99999999999999999998653211 1235688
Q ss_pred HHHHHHhcCCCCCeeeEeeeeEecccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHH
Q 004025 68 NGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLN 145 (778)
Q Consensus 68 ~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH 145 (778)
+|+++|+.|+||||++++++++... ...+||||||+ ++|.+++... ......+..++.||+.||.|||
T Consensus 85 ~E~~~l~~l~h~~iv~~~~~~~~~~------~~~~~lv~e~~~~~~l~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH 154 (298)
T 2zv2_A 85 QEIAILKKLDHPNVVKLVEVLDDPN------EDHLYMVFELVNQGPVMEVPTLK----PLSEDQARFYFQDLIKGIEYLH 154 (298)
T ss_dssp HHHHHHHTCCCTTBCCEEEEEECSS------SSEEEEEEECCTTCBSCCSSCSS----CCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCeEEEEEEcCC------CCEEEEEEecCCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998643 34899999999 4565543222 2234456677999999999999
Q ss_pred cCCCccccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhH
Q 004025 146 NDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSW 225 (778)
Q Consensus 146 ~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Diw 225 (778)
+ .+++||||||+||+++.+|.+||+|||++........ ......++..|+|||++.+... ..++.++|+|
T Consensus 155 ~-~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~---~~~~~~~Di~ 224 (298)
T 2zv2_A 155 Y-QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA------LLSNTVGTPAFMAPESLSETRK---IFSGKALDVW 224 (298)
T ss_dssp H-TTEECCCCCGGGEEECTTSCEEECCCTTCEECSSSSC------EECCCCSCGGGCCGGGCCTTCC---CEESHHHHHH
T ss_pred H-CCeeccCCCHHHEEECCCCCEEEecCCCccccccccc------cccCCcCCccccChhhhccCCC---CCCCchhhhH
Confidence 6 8999999999999999999999999999987754321 1112245568999999875310 0135679999
Q ss_pred HHHHHHHHHHhCCCCCChhhhh--------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 226 GLGCLIYELFSGMRLSKTEELR--------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 226 SLG~liyel~tg~~p~~~~~l~--------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
||||++|+|++|..||...... ....+|..+.+++.+||..||.+||++.++++|+
T Consensus 225 slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp 294 (298)
T 2zv2_A 225 AMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHP 294 (298)
T ss_dssp HHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCH
T ss_pred hHHHHHHHHHHCCCCCCCccHHHHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcCc
Confidence 9999999999999988643211 1135678899999999999999999999999998
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-36 Score=321.81 Aligned_cols=252 Identities=19% Similarity=0.216 Sum_probs=193.0
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc---
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA--- 95 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g--- 95 (778)
+|++.+.||.|+ | +||+|+++.+|+.||||++.... .+...+.+.+|+++|+.|+||||+++++++.+....+
T Consensus 7 ~y~~~~~lG~G~~g--~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 7 DFEPIQCMGRGGFG--VVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HEEEEEEEECC-CS--EEEEEEETTTCCEEEEEEEECCS-TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred cCceeeEecCCCCe--EEEEEEEcCCCcEEEEEEeecCC-chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 699999999998 8 99999999999999999998654 3345677899999999999999999999986542100
Q ss_pred ----------------------------------------------CCcccEEEEEecCC--cChHHHHHHhCcCCCcch
Q 004025 96 ----------------------------------------------TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRD 127 (778)
Q Consensus 96 ----------------------------------------------~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~ 127 (778)
.....++||||||| ++|.+++...........
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~ 163 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH 163 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCH
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhh
Confidence 01123589999999 579999987654333333
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCC------CccccccccCCCC
Q 004025 128 EYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANG------PMLQYAWLVGAQY 201 (778)
Q Consensus 128 ~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~------~~~~~~~~~~~~Y 201 (778)
..+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++............ ........++..|
T Consensus 164 ~~~~~i~~qi~~aL~~LH~-~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y 242 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLHS-KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY 242 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGG
T ss_pred HHHHHHHHHHHHHHHHHHh-CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCc
Confidence 4456679999999999996 89999999999999999999999999999887654221110 0011223455689
Q ss_pred CCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh--hhc--c-------CCCCcchHHHHHHHhccCCCC
Q 004025 202 KPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE--LRN--T-------ASIPKSLLPDYQRLLSSMPSR 270 (778)
Q Consensus 202 ~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~--l~~--~-------~~iP~~L~~~i~~lL~~dP~~ 270 (778)
+|||++.+ ..++.++|+|||||++|||++|..++.... ... . ...++.+.+++.+||..||.+
T Consensus 243 ~aPE~~~~------~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 316 (332)
T 3qd2_B 243 MSPEQIHG------NNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTE 316 (332)
T ss_dssp SCHHHHHC------CCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHHCSSGGG
T ss_pred cChHHhcC------CCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHHHhhccCCCcccccCChhHHHHHHHHccCCCCc
Confidence 99999876 367889999999999999999876643211 110 1 123456778899999999999
Q ss_pred CCChHHHHhcc
Q 004025 271 RLNSSKLIENS 281 (778)
Q Consensus 271 Rps~~~lL~~~ 281 (778)
||++.++++|+
T Consensus 317 Rps~~~~l~~~ 327 (332)
T 3qd2_B 317 RPEATDIIENA 327 (332)
T ss_dssp SCCHHHHHHST
T ss_pred CCCHHHHhhch
Confidence 99999999998
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=321.68 Aligned_cols=235 Identities=14% Similarity=0.184 Sum_probs=194.7
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
-.+|++.+.||.|+ | +||.|+++.+|+.|+||++.+.... ....+.+.+|+.+|+.++||||++++++++++
T Consensus 5 ~~~y~~~~~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~---- 78 (318)
T 1fot_A 5 LQDFQILRTLGTGSFG--RVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDA---- 78 (318)
T ss_dssp GGGEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECS----
T ss_pred hHHcEEEEEEeeCCCE--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeC----
Confidence 34699999999998 8 9999999999999999999754211 13456788999999999999999999999864
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..+|+||||| ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+||
T Consensus 79 ----~~~~lv~e~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~g~~kL~Df 150 (318)
T 1fot_A 79 ----QQIFMIMDYIEGGELFSLLRKSQR---FPNPVAKFYAAEVCLALEYLHS-KDIIYRDLKPENILLDKNGHIKITDF 150 (318)
T ss_dssp ----SEEEEEECCCCSCBHHHHHHHTSS---CCHHHHHHHHHHHHHHHHHHHT-TTEECCCCCGGGEEECTTSCEEECCC
T ss_pred ----CEEEEEEeCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCccccCCChheEEEcCCCCEEEeec
Confidence 4899999999 589999987543 2344466679999999999995 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------ 247 (778)
|++...... .....++..|+|||++.+ ..++.++|+|||||++|||++|..||......
T Consensus 151 g~a~~~~~~---------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i 215 (318)
T 1fot_A 151 GFAKYVPDV---------TYTLCGTPDYIAPEVVST------KPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKI 215 (318)
T ss_dssp SSCEECSSC---------BCCCCSCTTTCCHHHHTT------CCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH
T ss_pred CcceecCCc---------cccccCCccccCHhHhcC------CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 999876532 122345668999999876 35778999999999999999999998543211
Q ss_pred --c----cCCCCcchHHHHHHHhccCCCCCC-----ChHHHHhcc
Q 004025 248 --N----TASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENS 281 (778)
Q Consensus 248 --~----~~~iP~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~ 281 (778)
. ...++..+.+++++||..||.+|+ ++.++++|+
T Consensus 216 ~~~~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp 260 (318)
T 1fot_A 216 LNAELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHP 260 (318)
T ss_dssp HHCCCCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSG
T ss_pred HhCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCc
Confidence 1 134566788999999999999999 899999998
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-35 Score=328.78 Aligned_cols=248 Identities=14% Similarity=0.114 Sum_probs=197.2
Q ss_pred CCCceeccCCCCC--C-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 18 DLPYNIGDPYPSA--W-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 18 ~~~Y~i~~~lg~g--~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
..+|++.+.||.| + | +||+|+++.+|+.|+||++..........+.+++|+++|+.++||||+++++++..+
T Consensus 24 ~~~y~~~~~lG~G~~~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--- 98 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLM--TVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIAD--- 98 (389)
T ss_dssp GGGEEEEEEEEEETTTTE--EEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET---
T ss_pred CCcEEEEecccCCcCCce--EEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEEC---
Confidence 3479999999999 5 6 999999999999999999987655556678899999999999999999999999874
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+||||||| ++|.+++....... .....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|
T Consensus 99 -----~~~~lv~e~~~~~~L~~~l~~~~~~~-~~~~~~~~~~~qi~~~l~~LH~-~~ivHrDlkp~NIll~~~~~~kl~d 171 (389)
T 3gni_B 99 -----NELWVVTSFMAYGSAKDLICTHFMDG-MNELAIAYILQGVLKALDYIHH-MGYVHRSVKASHILISVDGKVYLSG 171 (389)
T ss_dssp -----TEEEEEEECCTTCBHHHHHHHTCTTC-CCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECTTCCEEECC
T ss_pred -----CEEEEEEEccCCCCHHHHHhhhcccC-CCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCCCEEEcc
Confidence 4899999999 58999998753222 3345567779999999999996 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCC-CccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh----
Q 004025 173 FDVLSEFDGNNEAANG-PMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---- 247 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~-~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~---- 247 (778)
||++............ ........++..|+|||++.+.. ..++.++|+|||||++|||++|..||......
T Consensus 172 fg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~ 247 (389)
T 3gni_B 172 LRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNL----QGYDAKSDIYSVGITACELANGHVPFKDMPATQMLL 247 (389)
T ss_dssp GGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTS----SCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHH
T ss_pred cccceeeccccccccccccccccccccccccCHHHHhccC----CCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence 9998665432211100 00111123455799999987631 24678999999999999999999988532100
Q ss_pred ------------------------------------------------------ccCCCCcchHHHHHHHhccCCCCCCC
Q 004025 248 ------------------------------------------------------NTASIPKSLLPDYQRLLSSMPSRRLN 273 (778)
Q Consensus 248 ------------------------------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps 273 (778)
....++..+.+++++||..||.+||+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt 327 (389)
T 3gni_B 248 EKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPS 327 (389)
T ss_dssp HC--------------------------------------------------------CCHHHHHHHHHHTCSCTTTSCC
T ss_pred HHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCC
Confidence 00124566888999999999999999
Q ss_pred hHHHHhcc
Q 004025 274 SSKLIENS 281 (778)
Q Consensus 274 ~~~lL~~~ 281 (778)
+.++++|+
T Consensus 328 a~ell~hp 335 (389)
T 3gni_B 328 ASTLLNHS 335 (389)
T ss_dssp HHHHTTSG
T ss_pred HHHHhcCH
Confidence 99999998
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-36 Score=341.27 Aligned_cols=247 Identities=17% Similarity=0.251 Sum_probs=193.2
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.||.|+ | +||+|+++.+|+.||||++.+........+.+.+|+++|+.++||||+++++++...... .
T Consensus 62 ~~y~~~~~lG~G~~g--~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~--~ 137 (464)
T 3ttj_A 62 KRYQNLKPIGSGAQG--IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL--E 137 (464)
T ss_dssp TTEEEEEEEEECSSC--EEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCST--T
T ss_pred CCeEEEEEeecCCCe--EEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCcc--c
Confidence 4699999999999 9 999999999999999999987654555677889999999999999999999999754210 0
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
....+||||||+ ++|...+... .....+..+++||+.||.|||+ .+|+||||||+||+++.+|.+||+|||++
T Consensus 138 ~~~~~~lv~E~~~~~l~~~~~~~-----l~~~~~~~~~~qil~aL~~lH~-~~iiHrDlkp~NIll~~~~~~kl~DFG~a 211 (464)
T 3ttj_A 138 EFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLA 211 (464)
T ss_dssp TCCEEEEEEECCSEEHHHHHTSC-----CCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEECTTSCEEECCCCCC
T ss_pred cCCeEEEEEeCCCCCHHHHHhhc-----CCHHHHHHHHHHHHHHHHHHHH-CCcccCCCChHhEEEeCCCCEEEEEEEee
Confidence 135799999999 5677766432 2344567779999999999996 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----hcc---
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RNT--- 249 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~~~--- 249 (778)
+...... ......++..|+|||++.+ ..++.++|+|||||++|||++|.+||..... ..+
T Consensus 212 ~~~~~~~-------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~ 278 (464)
T 3ttj_A 212 RTAGTSF-------MMTPYVVTRYYRAPEVILG------MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 278 (464)
T ss_dssp -----CC-------CC----CCCTTCCHHHHTT------CCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred eecCCCc-------ccCCCcccccccCHHHHcC------CCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 8765421 1223356678999999987 3678899999999999999999999864321 000
Q ss_pred --------------------------CC------C---------------CcchHHHHHHHhccCCCCCCChHHHHhccc
Q 004025 250 --------------------------AS------I---------------PKSLLPDYQRLLSSMPSRRLNSSKLIENSV 282 (778)
Q Consensus 250 --------------------------~~------i---------------P~~L~~~i~~lL~~dP~~Rps~~~lL~~~~ 282 (778)
.. + +..+.+++++||..||.+||++.++|+|+
T Consensus 279 lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp- 357 (464)
T 3ttj_A 279 LGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP- 357 (464)
T ss_dssp HCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTST-
T ss_pred cCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcCh-
Confidence 00 1 23467899999999999999999999999
Q ss_pred CCcccccccc
Q 004025 283 GDFWMTEYFQ 292 (778)
Q Consensus 283 ~~~w~~~ff~ 292 (778)
|+..++.
T Consensus 358 ---~~~~~~~ 364 (464)
T 3ttj_A 358 ---YINVWYD 364 (464)
T ss_dssp ---TTGGGCC
T ss_pred ---hhhhccC
Confidence 6655543
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-35 Score=316.78 Aligned_cols=245 Identities=19% Similarity=0.254 Sum_probs=191.1
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc---hhHHHHHHHHHHHHhcC---CCCCeeeEeeeeE
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ---DGHLAAARNGVKRLRTV---RHPNILAFLHSTE 89 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~---~~~~~~~~~ev~~Lk~L---rHPnIlk~~d~~e 89 (778)
...+|++.+.||.|+ | +||+|+++.+|+.|+||++...... ......+.+|+..++.| +||||+++++++.
T Consensus 7 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~ 84 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYG--TVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCA 84 (308)
T ss_dssp ---CCEEEEEECCSSSC--CEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEE
T ss_pred cccceEEEEEEecCCCe--EEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeee
Confidence 456899999999998 8 8999999999999999999753321 11223455666666665 4999999999998
Q ss_pred ecccccCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcE
Q 004025 90 VENIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDW 168 (778)
Q Consensus 90 ~e~~~g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~ 168 (778)
....+. ...+|+||||+ ++|.+++....... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+
T Consensus 85 ~~~~~~---~~~~~lv~e~~~~~L~~~~~~~~~~~-~~~~~~~~i~~qi~~al~~lH~-~~ivH~Dlkp~Nil~~~~~~~ 159 (308)
T 3g33_A 85 TSRTDR---EIKVTLVFEHVDQDLRTYLDKAPPPG-LPAETIKDLMRQFLRGLDFLHA-NCIVHRDLKPENILVTSGGTV 159 (308)
T ss_dssp ECCSSS---EEEEEEEEECCCCBHHHHHHTCCTTC-SCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCTTTEEECTTSCE
T ss_pred ccCCCC---ceeEEEEehhhhcCHHHHHhhccCCC-CCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEEcCCCCE
Confidence 654221 33689999999 67999988754322 2344567779999999999996 899999999999999999999
Q ss_pred EEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh--
Q 004025 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-- 246 (778)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l-- 246 (778)
||+|||++....... ......++..|+|||++.+ ..++.++|+|||||++|+|++|.+||.....
T Consensus 160 kl~Dfg~a~~~~~~~-------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~ 226 (308)
T 3g33_A 160 KLADFGLARIYSYQM-------ALTPVVVTLWYRAPEVLLQ------STYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD 226 (308)
T ss_dssp EECSCSCTTTSTTCC-------CSGGGGCCCSSCCHHHHHT------SCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH
T ss_pred EEeeCccccccCCCc-------ccCCccccccccCchHHcC------CCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 999999998765321 1122345679999999876 3577899999999999999999998853211
Q ss_pred --hc-----------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 --RN-----------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 --~~-----------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. ...++..+.+++.+||..||.+||++.++++|+
T Consensus 227 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~ 298 (308)
T 3g33_A 227 QLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHS 298 (308)
T ss_dssp HHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTST
T ss_pred HHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCc
Confidence 00 124566788899999999999999999999998
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-35 Score=327.36 Aligned_cols=240 Identities=16% Similarity=0.275 Sum_probs=192.2
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..|++.+.||.|+ | +||+|+++.+|+.|+||++......+...+.+.+|+++|+.++||||+++++++..+... .
T Consensus 25 ~~y~~~~~lG~G~~g--~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~--~ 100 (367)
T 1cm8_A 25 AVYRDLQPVGSGAYG--AVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETL--D 100 (367)
T ss_dssp SSEEEEEEC--------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSST--T
T ss_pred ceEEEeEEeeecCCe--EEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCcc--c
Confidence 4699999999998 8 899999999999999999977655556677889999999999999999999999764210 0
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
....+||||||+ ++|.++++... .....+..+++||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 101 ~~~~~~lv~e~~~~~L~~~~~~~~----l~~~~~~~~~~qi~~~L~~LH~-~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 175 (367)
T 1cm8_A 101 DFTDFYLVMPFMGTDLGKLMKHEK----LGEDRIQFLVYQMLKGLRYIHA-AGIIHRDLKPGNLAVNEDCELKILDFGLA 175 (367)
T ss_dssp TCCCCEEEEECCSEEHHHHHHHCC----CCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred cCceEEEEEecCCCCHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHH-CCccccCcCHHHEEEcCCCCEEEEeeecc
Confidence 124679999999 47998887743 2345567789999999999996 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hhc----
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRN---- 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~~---- 248 (778)
+..... .....++..|+|||++.+. ..++.++|+|||||++|||++|.+||.... +..
T Consensus 176 ~~~~~~---------~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~ 241 (367)
T 1cm8_A 176 RQADSE---------MTGYVVTRWYRAPEVILNW-----MRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKV 241 (367)
T ss_dssp EECCSS---------CCSSCSCGGGCCTHHHHTT-----TCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred cccccc---------cCcCcCCCCcCCHHHHhCC-----CCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 876432 1122445689999998763 357789999999999999999999885321 100
Q ss_pred -----------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -----------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -----------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++.+||..||.+||++.++++|+
T Consensus 242 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp 309 (367)
T 1cm8_A 242 TGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHP 309 (367)
T ss_dssp HCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred cCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcCh
Confidence 123466788999999999999999999999998
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=327.82 Aligned_cols=235 Identities=17% Similarity=0.239 Sum_probs=195.6
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
.|++.+.||.|+ | +||+|+++.+|..|+||++..........+.+.+|+++|+.|+||||++++++++++
T Consensus 30 ~y~~~~~lG~G~~g--~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~------- 100 (362)
T 2bdw_A 30 NYDVKEELGKGAFS--VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE------- 100 (362)
T ss_dssp HEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECS-------
T ss_pred CeEEeeEEecCCCe--EEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC-------
Confidence 699999999998 8 999999999999999999987665555677899999999999999999999999874
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC---cEEEEec
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL---DWKLHAF 173 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g---~~KL~dF 173 (778)
..+||||||| ++|.+++..... .....+..++.||+.||.|||+ .+|+||||||+||+++.++ .+||+||
T Consensus 101 -~~~~lv~e~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~al~~lH~-~~ivH~Dlkp~NIll~~~~~~~~~kl~Df 175 (362)
T 2bdw_A 101 -SFHYLVFDLVTGGELFEDIVAREF---YSEADASHCIQQILESIAYCHS-NGIVHRNLKPENLLLASKAKGAAVKLADF 175 (362)
T ss_dssp -SEEEEEECCCCSCBHHHHHTTCSC---CCHHHHHHHHHHHHHHHHHHHH-TTCBCCCCSGGGEEESCSSTTCCEEECCC
T ss_pred -CEEEEEEecCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeEeccCchHHEEEecCCCCCCEEEeec
Confidence 4899999999 479888865432 2344566779999999999996 8999999999999998654 5999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------ 247 (778)
|++........ .....++..|+|||++.+ ..++.++|+|||||++|+|++|.+||......
T Consensus 176 G~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i 242 (362)
T 2bdw_A 176 GLAIEVNDSEA-------WHGFAGTPGYLSPEVLKK------DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 242 (362)
T ss_dssp TTCBCCTTCCS-------CCCSCSCTTTCCHHHHTT------CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred CcceEecCCcc-------cccCCCCccccCHHHHcc------CCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 99987754211 112345668999999876 35778999999999999999999988543211
Q ss_pred ----------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ----------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|..+.+++.+||..||.+||++.++++|+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 286 (362)
T 2bdw_A 243 KAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVP 286 (362)
T ss_dssp HHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSH
T ss_pred HhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCc
Confidence 0124677889999999999999999999999998
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-36 Score=326.98 Aligned_cols=240 Identities=15% Similarity=0.201 Sum_probs=194.0
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC---chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA---QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~---~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
..|++.+.||.|+ | +||+|+++.+|+.|+||++..... .....+.+.+|+++|+.|+||||++++++++.+
T Consensus 24 ~~y~~~~~lG~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~--- 98 (351)
T 3c0i_A 24 DVYELCEVIGKGPFS--VVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSD--- 98 (351)
T ss_dssp HHEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEET---
T ss_pred cceEEeeEEeeCCCE--EEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeC---
Confidence 3699999999998 7 999999999999999999974311 112356789999999999999999999999874
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcC-CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCc---E
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLE-GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD---W 168 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~-~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~---~ 168 (778)
..+||||||| ++|.+++...... .......+..++.||+.||.|||+ .+++||||||+||+++.++. +
T Consensus 99 -----~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~-~~ivHrDlkp~NIl~~~~~~~~~v 172 (351)
T 3c0i_A 99 -----GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD-NNIIHRDVKPHCVLLASKENSAPV 172 (351)
T ss_dssp -----TEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECSSSTTCCE
T ss_pred -----CEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCChHHeEEecCCCCCcE
Confidence 4899999999 5798877654321 122344566779999999999996 89999999999999987665 9
Q ss_pred EEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh-
Q 004025 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR- 247 (778)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~- 247 (778)
||+|||++........ ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 173 kl~Dfg~a~~~~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~ 240 (351)
T 3c0i_A 173 KLGGFGVAIQLGESGL------VAGGRVGTPHFMAPEVVKR------EPYGKPVDVWGCGVILFILLSGCLPFYGTKERL 240 (351)
T ss_dssp EECCCTTCEECCTTSC------BCCCCCSCGGGCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHH
T ss_pred EEecCcceeEecCCCe------eecCCcCCcCccCHHHHcC------CCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHH
Confidence 9999999987765321 1112345568999999876 35678999999999999999999988543210
Q ss_pred --------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 --------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 --------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++++||..||.+||++.++++|+
T Consensus 241 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp 288 (351)
T 3c0i_A 241 FEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHP 288 (351)
T ss_dssp HHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred HHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCh
Confidence 1145788899999999999999999999999998
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-36 Score=324.46 Aligned_cols=239 Identities=16% Similarity=0.186 Sum_probs=186.9
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
-.+|++.+.||.|+ | +||+|+++.+|+.|+||++............+.+|+++|+.++||||++++++++.+
T Consensus 33 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 105 (329)
T 3gbz_A 33 IDRYRRITKLGEGTYG--EVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHN----- 105 (329)
T ss_dssp GGGEEEEEEEEECSSS--EEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEET-----
T ss_pred hhhEEEEEEEEecCCe--EEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecC-----
Confidence 34799999999998 8 999999999999999999986654444566778999999999999999999999874
Q ss_pred CcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEc-----CCCcEEE
Q 004025 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT-----QTLDWKL 170 (778)
Q Consensus 97 ~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~-----~~g~~KL 170 (778)
..+||||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++ ..+.+||
T Consensus 106 ---~~~~lv~e~~~~~L~~~~~~~~~---~~~~~~~~i~~ql~~~l~~LH~-~~ivH~Dlkp~NIll~~~~~~~~~~~kl 178 (329)
T 3gbz_A 106 ---HRLHLIFEYAENDLKKYMDKNPD---VSMRVIKSFLYQLINGVNFCHS-RRCLHRDLKPQNLLLSVSDASETPVLKI 178 (329)
T ss_dssp ---TEEEEEEECCSEEHHHHHHHCTT---CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEEEC-----CCEEEE
T ss_pred ---CEEEEEEecCCCCHHHHHhhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCEECCCCCHHHEEEecCCCCccceEEE
Confidence 4899999999 679999887543 2344566779999999999996 8999999999999994 4555999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---- 246 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l---- 246 (778)
+|||++......... .....++..|+|||++.+. ..++.++|+|||||++|||++|.+||.....
T Consensus 179 ~Dfg~a~~~~~~~~~------~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~ 247 (329)
T 3gbz_A 179 GDFGLARAFGIPIRQ------FTHEIITLWYRPPEILLGS-----RHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQL 247 (329)
T ss_dssp CCTTHHHHHC-----------------CCTTCCHHHHTTC-----CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred CcCCCccccCCcccc------cCCCcCCccccCHHHhcCC-----CCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHH
Confidence 999999877542111 1122446689999998763 3467899999999999999999998853211
Q ss_pred hcc--------------------------------------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 RNT--------------------------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ~~~--------------------------------------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
..+ ..++..+.+++.+||..||.+||++.++++|+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 320 (329)
T 3gbz_A 248 FKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHP 320 (329)
T ss_dssp HHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred HHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCc
Confidence 000 01566788999999999999999999999998
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-35 Score=334.38 Aligned_cols=237 Identities=17% Similarity=0.230 Sum_probs=197.6
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..|++.+.||.|+ | +||+|+++.+|+.|++|++..+.......+.+.+|+++|+.|+||||++++++++++
T Consensus 11 ~~Y~i~~~LG~G~fg--~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 82 (444)
T 3soa_A 11 EEYQLFEELGKGAFS--VVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEE------ 82 (444)
T ss_dssp HHEEEEEEEEEC--C--EEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECS------
T ss_pred CCeEEEEEeccCCCe--EEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEEC------
Confidence 4699999999999 8 999999999999999999998765555667889999999999999999999999864
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEc---CCCcEEEEe
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT---QTLDWKLHA 172 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~---~~g~~KL~d 172 (778)
..+||||||| ++|.+++..... .....+..++.||+.||.|||+ .+|+||||||+||+++ .++.+||+|
T Consensus 83 --~~~~lv~E~~~gg~L~~~i~~~~~---~~e~~~~~i~~qil~aL~~lH~-~givHrDlKp~NIll~~~~~~~~vkL~D 156 (444)
T 3soa_A 83 --GHHYLIFDLVTGGELFEDIVAREY---YSEADASHCIQQILEAVLHCHQ-MGVVHRNLKPENLLLASKLKGAAVKLAD 156 (444)
T ss_dssp --SEEEEEECCCBCCBHHHHHHHCSC---CCHHHHHHHHHHHHHHHHHHHH-TTCBCCCCSSTTEEESBSSTTCCEEECC
T ss_pred --CEEEEEEEeCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEEeccCCCCcEEEcc
Confidence 4899999999 579988887543 2344466679999999999996 8999999999999998 468899999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh-----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----- 247 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~----- 247 (778)
||++......... .....++..|+|||++.+ ..++.++|+|||||++|+|++|.+||......
T Consensus 157 FG~a~~~~~~~~~------~~~~~gt~~Y~APE~l~~------~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~ 224 (444)
T 3soa_A 157 FGLAIEVEGEQQA------WFGFAGTPGYLSPEVLRK------DPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQ 224 (444)
T ss_dssp CSSCBCCCTTCCB------CCCSCSCGGGCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred CceeEEecCCCce------eecccCCcccCCHHHhcC------CCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHH
Confidence 9999877543211 122345668999999876 35778999999999999999999998543211
Q ss_pred -----------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -----------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++.+||..||.+||++.++|+|+
T Consensus 225 i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp 269 (444)
T 3soa_A 225 IKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHP 269 (444)
T ss_dssp HHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSC
T ss_pred HHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCc
Confidence 0135678899999999999999999999999998
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-35 Score=321.99 Aligned_cols=241 Identities=14% Similarity=0.186 Sum_probs=196.2
Q ss_pred CCCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEec
Q 004025 15 GVKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVE 91 (778)
Q Consensus 15 ~~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e 91 (778)
.+...+|++.+.||.|+ | +||.|+++.+|+.|+||++.+... .....+.+.+|+.+|+++ +||||++++++++++
T Consensus 5 ~~~~~~y~~~~~lG~G~fg--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~ 82 (345)
T 3a8x_A 5 PLGLQDFDLLRVIGRGSYA--KVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE 82 (345)
T ss_dssp CCCGGGEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred CCchhheEEEEEEEecCCe--EEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeC
Confidence 34456799999999998 8 999999999999999999986543 234566788999999988 899999999999874
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEE
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~K 169 (778)
..+||||||+ ++|..++..... .....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+|
T Consensus 83 --------~~~~lv~e~~~gg~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~g~~k 150 (345)
T 3a8x_A 83 --------SRLFFVIEYVNGGDLMFHMQRQRK---LPEEHARFYSAEISLALNYLHE-RGIIYRDLKLDNVLLDSEGHIK 150 (345)
T ss_dssp --------SEEEEEECCCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHH-TTCBCCCCCGGGEEECTTSCEE
T ss_pred --------CEEEEEEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCceecCCCHHHEEECCCCCEE
Confidence 4899999999 479999987543 2344566779999999999996 8999999999999999999999
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh-----
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----- 244 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~----- 244 (778)
|+|||+++....... ......++..|+|||++.+ ..++.++|+|||||++|||++|.+||...
T Consensus 151 L~DFG~a~~~~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~ 218 (345)
T 3a8x_A 151 LTDYGMCKEGLRPGD------TTSTFCGTPNYIAPEILRG------EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN 218 (345)
T ss_dssp ECCGGGCBCSCCTTC------CBCCCCSCGGGCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC---
T ss_pred EEeccccccccCCCC------cccccCCCccccCccccCC------CCCChHHhHHHHHHHHHHHHhCCCCcCCcccccc
Confidence 999999986433211 1122345668999999876 35778999999999999999999998531
Q ss_pred -------hh-----hcc----CCCCcchHHHHHHHhccCCCCCCCh------HHHHhcc
Q 004025 245 -------EL-----RNT----ASIPKSLLPDYQRLLSSMPSRRLNS------SKLIENS 281 (778)
Q Consensus 245 -------~l-----~~~----~~iP~~L~~~i~~lL~~dP~~Rps~------~~lL~~~ 281 (778)
.+ ... ..++..+.+++++||..||.+||++ .++++|+
T Consensus 219 ~~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp 277 (345)
T 3a8x_A 219 PDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHP 277 (345)
T ss_dssp ----CHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSG
T ss_pred cccccHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCC
Confidence 00 111 2456678899999999999999995 7999998
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-35 Score=332.74 Aligned_cols=249 Identities=16% Similarity=0.201 Sum_probs=194.3
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.||.|+ | +||+|+++.+|+.||||++..........+.+.+|+++|+.|+||||+++++++.......
T Consensus 26 ~~y~~~~~lG~G~~g--~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~-- 101 (432)
T 3n9x_A 26 DNYIIKHLIGRGSYG--YVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLK-- 101 (432)
T ss_dssp TTEEEEEEEEEETTE--EEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTT--
T ss_pred CCEEEEEEEeecCCE--EEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCc--
Confidence 4799999999998 8 9999999999999999999876555556778899999999999999999999997643110
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
...+||||||+ ++|.++++.... .....++.+++||+.||.|||+ .+|+||||||+||+|+.+|.+||+|||++
T Consensus 102 -~~~~~lv~e~~~~~L~~~~~~~~~---l~~~~~~~i~~qil~aL~~LH~-~givHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 102 -FDELYIVLEIADSDLKKLFKTPIF---LTEEHIKTILYNLLLGENFIHE-SGIIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp -CCCEEEEEECCSEEHHHHHHSSCC---CCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred -CCeEEEEEecCCcCHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHH-CCCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 24799999999 579999876432 2345577779999999999996 89999999999999999999999999999
Q ss_pred cccCCCCCCCC----------C------CccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhC---
Q 004025 177 SEFDGNNEAAN----------G------PMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG--- 237 (778)
Q Consensus 177 ~~~~~~~~~~~----------~------~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg--- 237 (778)
+.......... + ........++..|+|||++... ..++.++|+|||||++|||++|
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~-----~~~~~~~DiwSlG~il~ell~g~~p 251 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQ-----ENYTKSIDIWSTGCIFAELLNMLQS 251 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTC-----SCCCTHHHHHHHHHHHHHHHTTCTT
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcC-----CCCCcccccchHHHHHHHHHhcccc
Confidence 87754321100 0 0011234566789999987543 4678899999999999999974
Q ss_pred --------CCCCChhh---------------------hh---------------------------------------cc
Q 004025 238 --------MRLSKTEE---------------------LR---------------------------------------NT 249 (778)
Q Consensus 238 --------~~p~~~~~---------------------l~---------------------------------------~~ 249 (778)
.++|.... +. ..
T Consensus 252 ~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (432)
T 3n9x_A 252 HINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKY 331 (432)
T ss_dssp TCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHS
T ss_pred cccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHC
Confidence 44442210 00 01
Q ss_pred CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 250 ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 250 ~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
..++..+.+++++||..||.+||++.++|+|+
T Consensus 332 ~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp 363 (432)
T 3n9x_A 332 PSISDDGINLLESMLKFNPNKRITIDQALDHP 363 (432)
T ss_dssp TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCG
T ss_pred CCCCHHHHHHHHHHhcCCcccCCCHHHHhcCh
Confidence 34677889999999999999999999999998
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-35 Score=318.50 Aligned_cols=236 Identities=18% Similarity=0.211 Sum_probs=195.2
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch----hHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD----GHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~----~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
..|++++.||.|+ | +||+|+++.+|+.|+||++....... ...+.+.+|+.+|+.|+||||++++++++..
T Consensus 11 ~~y~~~~~lG~G~~g--~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-- 86 (326)
T 2y0a_A 11 DYYDTGEELGSGQFA--VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENK-- 86 (326)
T ss_dssp HHEEEEEEEECCSSE--EEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS--
T ss_pred cceEeceEEeeCCCe--EEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeC--
Confidence 4699999999998 8 99999999999999999998754322 2356789999999999999999999999863
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC----c
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL----D 167 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g----~ 167 (778)
..+|+||||| ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+| .
T Consensus 87 ------~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~al~~lH~-~~ivH~Dlkp~NIll~~~~~~~~~ 156 (326)
T 2y0a_A 87 ------TDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHS-LQIAHFDLKPENIMLLDRNVPKPR 156 (326)
T ss_dssp ------SEEEEEEECCCSCBHHHHHTTSSC---CBHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEESCSSSSSCC
T ss_pred ------CEEEEEEEcCCCCCHHHHHHhcCC---cCHHHHHHHHHHHHHHHHHHHH-CCeEcCCCCHHHEEEecCCCCCCC
Confidence 4899999999 579999865432 3345566779999999999996 8999999999999999888 8
Q ss_pred EEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-
Q 004025 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL- 246 (778)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l- 246 (778)
+||+|||++........ .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||.....
T Consensus 157 ~kl~Dfg~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~ 223 (326)
T 2y0a_A 157 IKIIDFGLAHKIDFGNE-------FKNIFGTPEFVAPEIVNY------EPLGLEADMWSIGVITYILLSGASPFLGDTKQ 223 (326)
T ss_dssp EEECCCTTCEECCTTSC-------CCCCCSCTTTCCHHHHTT------CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH
T ss_pred EEEEECCCCeECCCCCc-------cccccCCcCcCCceeecC------CCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH
Confidence 99999999987754221 112245668999999876 3577899999999999999999998853211
Q ss_pred ---hc------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 ---RN------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ---~~------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. ...++..+.+++++||..||.+||++.++++|+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 273 (326)
T 2y0a_A 224 ETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273 (326)
T ss_dssp HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHST
T ss_pred HHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCC
Confidence 10 135677789999999999999999999999998
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-35 Score=316.28 Aligned_cols=238 Identities=20% Similarity=0.226 Sum_probs=190.6
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.||.|+ | +||+|+++.+|+.|+||++..........+.+.+|++++++++||||++++++++.+
T Consensus 3 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------ 74 (311)
T 4agu_A 3 EKYEKIGKIGEGSYG--VVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRK------ 74 (311)
T ss_dssp CCEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET------
T ss_pred ccceEeeEEeecCCe--EEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecC------
Confidence 4699999999998 8 999999999999999999987655555667788999999999999999999999864
Q ss_pred cccEEEEEecCCc--ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+||||||+. .|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 75 --~~~~lv~e~~~~~~l~~~~~~~~~---~~~~~~~~i~~~l~~~l~~lH~-~~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 148 (311)
T 4agu_A 75 --RRLHLVFEYCDHTVLHELDRYQRG---VPEHLVKSITWQTLQAVNFCHK-HNCIHRDVKPENILITKHSVIKLCDFGF 148 (311)
T ss_dssp --TEEEEEEECCSEEHHHHHHHTSSC---CCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred --CeEEEEEEeCCCchHHHHHhhhcC---CCHHHHHHHHHHHHHHHHHHHH-CCCcCCCCChhhEEEcCCCCEEEeeCCC
Confidence 48999999993 46666654332 2344566679999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh--------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~-------- 247 (778)
+......... .....++..|+|||++.+. ..++.++|+|||||++|+|++|.+||......
T Consensus 149 ~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 217 (311)
T 4agu_A 149 ARLLTGPSDY------YDDEVATRWYRSPELLVGD-----TQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRK 217 (311)
T ss_dssp CEECC------------------GGGCCHHHHHTC-----SCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred chhccCcccc------cCCCcCCccccChHHHhcC-----CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 9877542211 1122345589999998753 35678999999999999999999888532100
Q ss_pred -----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -----------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++++||..||.+||++.++++|+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 286 (311)
T 4agu_A 218 TLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHP 286 (311)
T ss_dssp HHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSG
T ss_pred HhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcCh
Confidence 0134666788999999999999999999999998
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-35 Score=325.31 Aligned_cols=236 Identities=15% Similarity=0.201 Sum_probs=196.9
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
...+|++.+.||.|+ | +||.|+++.+|+.|+||++.+.... ....+.+.+|+++|+.++||||+++++++.++
T Consensus 39 ~~~~y~~~~~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--- 113 (350)
T 1rdq_E 39 QLDQFDRIKTLGTGSFG--RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN--- 113 (350)
T ss_dssp CGGGEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS---
T ss_pred CHHHCEEEEEeecCcCc--EEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC---
Confidence 445799999999998 8 9999999999999999999754211 13456788999999999999999999999874
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+||||||| ++|.+++...+. .....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|
T Consensus 114 -----~~~~lv~e~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~g~~kL~D 184 (350)
T 1rdq_E 114 -----SNLYMVMEYVAGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTD 184 (350)
T ss_dssp -----SEEEEEEECCTTCBHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECTTSCEEECC
T ss_pred -----CEEEEEEcCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCcccccCccceEEECCCCCEEEcc
Confidence 4899999999 579999987643 2344566779999999999996 9999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN---- 248 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~---- 248 (778)
||++...... .....++..|+|||++.+ ..++.++|+|||||++|||++|.+||.......
T Consensus 185 Fg~a~~~~~~---------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~ 249 (350)
T 1rdq_E 185 FGFAKRVKGR---------TWTLCGTPEALAPEIILS------KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 249 (350)
T ss_dssp CTTCEECSSC---------BCCCEECGGGCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred cccceeccCC---------cccccCCccccCHHHhcC------CCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHH
Confidence 9999876542 112345668999999876 357789999999999999999999986432111
Q ss_pred --------cCCCCcchHHHHHHHhccCCCCCCC-----hHHHHhcc
Q 004025 249 --------TASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENS 281 (778)
Q Consensus 249 --------~~~iP~~L~~~i~~lL~~dP~~Rps-----~~~lL~~~ 281 (778)
...++..+.+++++||..||.+|++ +.++++|+
T Consensus 250 i~~~~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~ 295 (350)
T 1rdq_E 250 IVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHK 295 (350)
T ss_dssp HHHCCCCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSG
T ss_pred HHcCCCCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCc
Confidence 1346778899999999999999998 99999998
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-35 Score=322.58 Aligned_cols=234 Identities=17% Similarity=0.234 Sum_probs=194.0
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..|++++.||.|+ | +||+|+++.+++.|++|++.... .....+++|+.+|+.++||||+++++++++.
T Consensus 5 ~~y~~~~~lG~G~~g--~Vy~~~~~~~~~~~a~K~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~------ 73 (321)
T 1tki_A 5 EKYMIAEDLGRGEFG--IVHRCVETSSKKTYMAKFVKVKG---TDQVLVKKEISILNIARHRNILHLHESFESM------ 73 (321)
T ss_dssp TTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEECCCT---HHHHHHHHHHHHHHHSCCTTBCCEEEEEEET------
T ss_pred hceEeeeEEecCCCe--EEEEEEECCCCcEEEEEEEecCc---ccHHHHHHHHHHHHhCCCCCCCeEeEEEecC------
Confidence 5799999999998 8 99999999999999999997542 3345688999999999999999999999874
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC--CCcEEEEec
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ--TLDWKLHAF 173 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~--~g~~KL~dF 173 (778)
..+||||||| ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++. ++.+||+||
T Consensus 74 --~~~~lv~e~~~g~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~-~givH~Dlkp~NIl~~~~~~~~~kl~Df 148 (321)
T 1tki_A 74 --EELVMIFEFISGLDIFERINTSAF--ELNEREIVSYVHQVCEALQFLHS-HNIGHFDIRPENIIYQTRRSSTIKIIEF 148 (321)
T ss_dssp --TEEEEEECCCCCCBHHHHHTSSSC--CCCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEESSSSCCCEEECCC
T ss_pred --CEEEEEEEeCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH-CCCCcCCCCHHHEEEccCCCCCEEEEEC
Confidence 4899999999 479998865431 12344566779999999999996 89999999999999997 789999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------ 247 (778)
|++..+..... .....++..|+|||++.+. .++.++|+|||||++|+|++|.+||......
T Consensus 149 g~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i 215 (321)
T 1tki_A 149 GQARQLKPGDN-------FRLLFTAPEYYAPEVHQHD------VVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENI 215 (321)
T ss_dssp TTCEECCTTCE-------EEEEESCGGGSCHHHHTTC------EECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH
T ss_pred CCCeECCCCCc-------cccccCChhhcCcHHhcCC------CCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHH
Confidence 99987754211 1123455689999998763 4567999999999999999999998543211
Q ss_pred ----------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ----------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|..+.+++.+||..||.+||++.++++|+
T Consensus 216 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp 259 (321)
T 1tki_A 216 MNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHP 259 (321)
T ss_dssp HHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred HcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcCh
Confidence 1136788899999999999999999999999998
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-36 Score=327.86 Aligned_cols=240 Identities=16% Similarity=0.199 Sum_probs=192.2
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVEN 92 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~ 92 (778)
+.-.+|++.+.||.|+ | +||+|+++.+|+.||||++.+... .....+.+.+|.++|+.+ +||||++++++++++
T Consensus 20 ~~~~~y~~~~~lG~G~fg--~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~- 96 (353)
T 3txo_A 20 LGIDNFEFIRVLGKGSFG--KVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTP- 96 (353)
T ss_dssp ---CCEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECS-
T ss_pred CchhheEEEEEEeeCCCE--EEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeC-
Confidence 3445799999999998 8 999999999999999999985421 123456788999999988 699999999999874
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEE
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
..+||||||| ++|..++...... ....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||
T Consensus 97 -------~~~~lv~E~~~gg~L~~~l~~~~~~---~~~~~~~~~~qi~~aL~~LH~-~givHrDlkp~NILl~~~g~ikL 165 (353)
T 3txo_A 97 -------DRLFFVMEFVNGGDLMFHIQKSRRF---DEARARFYAAEIISALMFLHD-KGIIYRDLKLDNVLLDHEGHCKL 165 (353)
T ss_dssp -------SEEEEEEECCCSCBHHHHHHHHSSC---CHHHHHHHHHHHHHHHHHHHH-TTCBCCCCCGGGEEECTTSCEEE
T ss_pred -------CEEEEEEeCCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCCcccCCCHHHEEECCCCCEEE
Confidence 4899999999 5799999876432 344466679999999999996 89999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc--
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN-- 248 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~-- 248 (778)
+|||++....... .......++..|+|||++.+ ..++.++|+|||||++|||++|.+||.......
T Consensus 166 ~DFG~a~~~~~~~------~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~ 233 (353)
T 3txo_A 166 ADFGMCKEGICNG------VTTATFCGTPDYIAPEILQE------MLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLF 233 (353)
T ss_dssp CCCTTCBCSCC---------------CCGGGCCHHHHHH------HHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred ccccceeecccCC------ccccccCCCcCeEChhhcCC------CCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHH
Confidence 9999998643321 11223345669999999876 356789999999999999999999986532211
Q ss_pred ----------cCCCCcchHHHHHHHhccCCCCCCCh------HHHHhcc
Q 004025 249 ----------TASIPKSLLPDYQRLLSSMPSRRLNS------SKLIENS 281 (778)
Q Consensus 249 ----------~~~iP~~L~~~i~~lL~~dP~~Rps~------~~lL~~~ 281 (778)
...++..+.+++++||..||.+|+++ .++++|+
T Consensus 234 ~~i~~~~~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp 282 (353)
T 3txo_A 234 EAILNDEVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHP 282 (353)
T ss_dssp HHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSG
T ss_pred HHHHcCCCCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCC
Confidence 12356678899999999999999998 8999998
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-35 Score=309.92 Aligned_cols=238 Identities=16% Similarity=0.228 Sum_probs=196.8
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|++.+.||.|+ | +||+|+++.+|+.|+||++..........+.+.+|+++++.++||||+++++++..+
T Consensus 4 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---- 77 (284)
T 3kk8_A 4 FSDNYDVKEELGKGAFS--VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE---- 77 (284)
T ss_dssp TTTTEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECS----
T ss_pred hhhhhhhhhhhcCcCCe--EEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcC----
Confidence 456899999999998 8 999999999999999999987655555667889999999999999999999999864
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCc---EEE
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD---WKL 170 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~---~KL 170 (778)
...|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.++. +||
T Consensus 78 ----~~~~~v~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dikp~Nil~~~~~~~~~~kl 149 (284)
T 3kk8_A 78 ----SFHYLVFDLVTGGELFEDIVAREF---YSEADASHCIQQILESIAYCHS-NGIVHRNLKPENLLLASKAKGAAVKL 149 (284)
T ss_dssp ----SEEEEEECCCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCCGGGEEESSSSTTCCEEE
T ss_pred ----CEEEEEEecCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCcCcCCCCHHHEEEecCCCCCcEEE
Confidence 4899999999 478888876543 2344456679999999999996 89999999999999987665 999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh---
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--- 247 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~--- 247 (778)
+|||++........ .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 150 ~Dfg~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~ 216 (284)
T 3kk8_A 150 ADFGLAIEVNDSEA-------WHGFAGTPGYLSPEVLKK------DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLY 216 (284)
T ss_dssp CCCTTCEECCSSCB-------CCCSCSCGGGCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred eeceeeEEcccCcc-------ccCCCCCcCCcCchhhcC------CCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHH
Confidence 99999987654221 112234568999999876 35678999999999999999999988532211
Q ss_pred -------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|..+.+++.+||..||.+||++.++++|+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~ 263 (284)
T 3kk8_A 217 AQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVP 263 (284)
T ss_dssp HHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSH
T ss_pred HHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCc
Confidence 0135677899999999999999999999999998
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-36 Score=346.05 Aligned_cols=304 Identities=15% Similarity=0.194 Sum_probs=221.6
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
+....|++.+.||.|+ | +||.|+++.+|+.||||++.+.... ......+.+|+++|+.++||||+++++++++.
T Consensus 181 ~~~~~f~~~~~LG~G~fG--~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~-- 256 (576)
T 2acx_A 181 VTKNTFRQYRVLGKGGFG--EVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETK-- 256 (576)
T ss_dssp CCGGGEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECS--
T ss_pred ccccceEEEEEEeeCCCE--EEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeC--
Confidence 3456799999999998 8 9999999999999999999754221 12345688999999999999999999999874
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
..+||||||| ++|..++...+... .....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+
T Consensus 257 ------~~l~lVmEy~~gg~L~~~l~~~~~~~-l~e~~~~~i~~qIl~aL~yLH~-~gIvHrDLKPeNILld~~g~vKL~ 328 (576)
T 2acx_A 257 ------DALCLVLTLMNGGDLKFHIYHMGQAG-FPEARAVFYAAEICCGLEDLHR-ERIVYRDLKPENILLDDHGHIRIS 328 (576)
T ss_dssp ------SEEEEEECCCCSCBHHHHHHSSSSCC-CCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEECTTSCEEEC
T ss_pred ------CEEEEEEEcCCCCcHHHHHHhcCCCC-CCHHHHHHHHHHHHHHHHHHHH-CCEeccCCchheEEEeCCCCeEEE
Confidence 4899999999 57999987654322 2344566779999999999996 899999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh------
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE------ 245 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~------ 245 (778)
|||++..+..... .....++..|+|||++.+ ..++.++|+|||||++|||++|.+||....
T Consensus 329 DFGla~~~~~~~~-------~~~~~GT~~Y~APEvl~~------~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~ 395 (576)
T 2acx_A 329 DLGLAVHVPEGQT-------IKGRVGTVGYMAPEVVKN------ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKRE 395 (576)
T ss_dssp CCTTCEECCTTCC-------EECCCSCGGGCCHHHHTT------CEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHH
T ss_pred ecccceecccCcc-------ccccCCCccccCHHHHcC------CCCCccchHHHHHHHHHHHHhCCCCCcccccchhHH
Confidence 9999987754211 122345668999999876 356789999999999999999999986431
Q ss_pred -hhc---------cCCCCcchHHHHHHHhccCCCCCC-----ChHHHHhcccCCccccccc---------cch-------
Q 004025 246 -LRN---------TASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENSVGDFWMTEYF---------QNK------- 294 (778)
Q Consensus 246 -l~~---------~~~iP~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~~~~~w~~~ff---------~n~------- 294 (778)
+.. ...++..+.+++++||..||.+|+ ++.++++|+ |+...- ..+
T Consensus 396 ~i~~~i~~~~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~Hp----fF~~i~w~~l~~~~~~pp~~p~~~~ 471 (576)
T 2acx_A 396 EVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHP----LFKKLNFKRLGAGMLEPPFKPDPQA 471 (576)
T ss_dssp HHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSG----GGTTCCHHHHHTTCSCCSCCCCCCC
T ss_pred HHHHHhhcccccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhCh----hhccCCHHHHhcCCCCCCCCCCccc
Confidence 110 134667789999999999999999 789999998 443210 000
Q ss_pred -----hhhhhHHhhhcccCChhhHhHhhhhchhhhcCCC--hhhhhhchHHHHHHHHhhCC
Q 004025 295 -----LVDTIHFMEILNLKDSVEKDTFFRKLPNLAEQLP--RQIVLKKLLPLLASALEFGS 348 (778)
Q Consensus 295 -----lv~~~~~Le~l~~k~~~EK~~F~~~L~~~l~~fp--~~~~~~kILP~Ll~~~~~~~ 348 (778)
..+...|.+...+.-..+...||+++......+| .+++...+.++|.....+|+
T Consensus 472 ~~~~~~~d~~~f~~~~~~~~~~~~~~~f~~f~~~~~~~~~~~e~~~~~~~~~l~~~~~~g~ 532 (576)
T 2acx_A 472 IYCKDVLDIEQFSTVKGVELEPTDQDFYQKFATGSVPIPWQNEMVETECFQELNVFGLDGS 532 (576)
T ss_dssp CCC-----------------CHHHHHHHHHHCCEECHHHHHHHHHHTTHHHHHHCBSSSCC
T ss_pred cccCCcccHhhccccCCCCCCccHHHHHhhhccCCCCcccchhhhhcchhhhhcccCCCCC
Confidence 0111122222223334455667776554433344 56666777777665554444
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-35 Score=318.09 Aligned_cols=251 Identities=18% Similarity=0.268 Sum_probs=194.4
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.||.|+ | +||+|+++.+|+.|+||++............+.+|+++|+.++||||+++++++.........
T Consensus 17 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFG--EVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 94 (351)
T ss_dssp GGEEEEEECSSCSTT--SEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred cceeEEEEEecCCCc--EEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence 5799999999999 8 899999999999999999976654444455678999999999999999999999864311000
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
....+||||||+ ++|...+...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 95 ~~~~~~lv~e~~~~~l~~~l~~~~~~--~~~~~~~~i~~qi~~~l~~LH~-~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 95 CKGSIYLVFDFCEHDLAGLLSNVLVK--FTLSEIKRVMQMLLNGLYYIHR-NKILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp --CEEEEEEECCSEEHHHHHHCTTSC--CCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCceEEEEEeccCCCHHHHHhhccCC--CCHHHHHHHHHHHHHHHHHHHH-CCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 123799999999 5787777654321 3344567779999999999996 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh----c----
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----N---- 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~----~---- 248 (778)
..+......... ......++..|+|||++.+. ..++.++|+|||||++|+|++|.+||...... .
T Consensus 172 ~~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~-----~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~ 244 (351)
T 3mi9_A 172 RAFSLAKNSQPN--RYTNRVVTLWYRPPELLLGE-----RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQL 244 (351)
T ss_dssp EECCCCSSSSCC--CCCSSCSCGGGCCHHHHTTC-----CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred cccccccccccc--ccCCcccccCccCchhhcCC-----CCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence 877543221111 11223445689999998753 35678999999999999999999988642110 0
Q ss_pred cCC------------------------------------CCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 TAS------------------------------------IPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ~~~------------------------------------iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
... .++.+.+++.+||..||.+||++.++++|+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 313 (351)
T 3mi9_A 245 CGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD 313 (351)
T ss_dssp HCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred hCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCC
Confidence 000 134577899999999999999999999998
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-35 Score=312.93 Aligned_cols=236 Identities=20% Similarity=0.180 Sum_probs=187.2
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecccccC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~g~ 96 (778)
.+|++.++||.|+ | +||+|+++.+|+.||||++..............+|+..+..+ +||||++++++++..
T Consensus 57 ~~y~~~~~LG~G~~g--~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~----- 129 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYG--EVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEG----- 129 (311)
T ss_dssp HHEEEEEEEEEETTE--EEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET-----
T ss_pred hheeeeheeccCCCe--EEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeC-----
Confidence 3599999999998 8 999999999999999999876544444444455555555554 899999999999863
Q ss_pred CcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 97 ~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+||||||+ ++|.+++...+.. .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 130 ---~~~~lv~e~~~~~L~~~~~~~~~~--l~~~~~~~i~~qi~~aL~~LH~-~~ivH~Dikp~NIll~~~~~~kl~DFG~ 203 (311)
T 3p1a_A 130 ---GILYLQTELCGPSLQQHCEAWGAS--LPEAQVWGYLRDTLLALAHLHS-QGLVHLDVKPANIFLGPRGRCKLGDFGL 203 (311)
T ss_dssp ---TEEEEEEECCCCBHHHHHHHHCSC--CCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECGGGCEEECCCTT
T ss_pred ---CEEEEEEeccCCCHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHH-CCEecCCCCHHHEEECCCCCEEEcccee
Confidence 4899999999 5788888776421 2344566679999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCC-hhhhhc------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSK-TEELRN------ 248 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~-~~~l~~------ 248 (778)
+........ .....++..|+|||++.+ .++.++|+|||||++|||++|..++. ......
T Consensus 204 a~~~~~~~~-------~~~~~gt~~y~aPE~~~~-------~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~ 269 (311)
T 3p1a_A 204 LVELGTAGA-------GEVQEGDPRYMAPELLQG-------SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYL 269 (311)
T ss_dssp CEECC-------------CCCCCGGGCCGGGGGT-------CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTTTCC
T ss_pred eeecccCCC-------CcccCCCccccCHhHhcC-------CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhccCC
Confidence 887654211 111234568999999875 35679999999999999999965543 332221
Q ss_pred ----cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ----~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++.+||..||.+||++.++++|+
T Consensus 270 ~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp 306 (311)
T 3p1a_A 270 PPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALP 306 (311)
T ss_dssp CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCc
Confidence 235778899999999999999999999999998
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-35 Score=328.33 Aligned_cols=240 Identities=14% Similarity=0.191 Sum_probs=193.3
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTV-RHPNILAFLHSTEVEN 92 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~ 92 (778)
+...+|++.+.||.|+ | +||+|+++.+++.||||++.+..... .....+.+|..+|+++ +||||+++++++.++
T Consensus 49 ~~~~~y~~~~~LG~G~fG--~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~- 125 (396)
T 4dc2_A 49 LGLQDFDLLRVIGRGSYA--KVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE- 125 (396)
T ss_dssp CCGGGEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECS-
T ss_pred CChhHcEEEEEEeeCCCe--EEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEEC-
Confidence 3345799999999998 8 99999999999999999998653222 3345678899999887 899999999999874
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEE
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
..+||||||| ++|..++..... .....++.++.||+.||.|||+ .+|+||||||+||+++.+|.+||
T Consensus 126 -------~~~~lV~E~~~gg~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~LH~-~givHrDLKp~NILl~~~g~ikL 194 (396)
T 4dc2_A 126 -------SRLFFVIEYVNGGDLMFHMQRQRK---LPEEHARFYSAEISLALNYLHE-RGIIYRDLKLDNVLLDSEGHIKL 194 (396)
T ss_dssp -------SEEEEEEECCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHH-TTCBCCCCCGGGEEECTTSCEEE
T ss_pred -------CEEEEEEEcCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCEEeccCCHHHEEECCCCCEEE
Confidence 4899999999 579999887643 2344566779999999999996 89999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-----
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----- 245 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----- 245 (778)
+|||+++....... ......++..|+|||++.+ ..++.++|+|||||++|||++|.+||....
T Consensus 195 ~DFGla~~~~~~~~------~~~~~~gt~~Y~aPE~l~~------~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~ 262 (396)
T 4dc2_A 195 TDYGMCKEGLRPGD------TTSTFCGTPNYIAPEILRG------EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP 262 (396)
T ss_dssp CCCTTCBCCCCTTC------CBCCCCBCGGGCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC----
T ss_pred eecceeeecccCCC------ccccccCCcccCCchhhcC------CCCChHHHHHHHHHHHHHHHhCCCCCccccccccc
Confidence 99999986433211 1223355669999999887 467889999999999999999999984210
Q ss_pred -------h-----hcc----CCCCcchHHHHHHHhccCCCCCCCh------HHHHhcc
Q 004025 246 -------L-----RNT----ASIPKSLLPDYQRLLSSMPSRRLNS------SKLIENS 281 (778)
Q Consensus 246 -------l-----~~~----~~iP~~L~~~i~~lL~~dP~~Rps~------~~lL~~~ 281 (778)
+ ... ..++..+.+++++||..||.+|+++ .++++|+
T Consensus 263 ~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hp 320 (396)
T 4dc2_A 263 DQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHP 320 (396)
T ss_dssp --CCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHST
T ss_pred chhhHHHHHHHHhccccCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCc
Confidence 0 111 2456678899999999999999985 7999998
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-35 Score=323.98 Aligned_cols=241 Identities=15% Similarity=0.181 Sum_probs=194.2
Q ss_pred CCCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEec
Q 004025 15 GVKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVE 91 (778)
Q Consensus 15 ~~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e 91 (778)
.+...+|++.+.||.|+ | +||+|+++.+|+.||||++.+... .+...+.+.+|.++|+.+ +||||+++++++++.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~ 90 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFG--KVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTK 90 (345)
T ss_dssp ---CTTEEEEEEEEECSSS--EEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred CCChHHeEEEEEEeeCCCe--EEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeC
Confidence 34556899999999999 8 999999999999999999985321 112345678899999876 899999999999874
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEE
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~K 169 (778)
..+||||||| ++|..++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+|
T Consensus 91 --------~~~~lv~E~~~gg~L~~~l~~~~~~---~~~~~~~~~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~g~vk 158 (345)
T 1xjd_A 91 --------ENLFFVMEYLNGGDLMYHIQSCHKF---DLSRATFYAAEIILGLQFLHS-KGIVYRDLKLDNILLDKDGHIK 158 (345)
T ss_dssp --------SEEEEEEECCTTCBHHHHHHHHSSC---CHHHHHHHHHHHHHHHHHHHH-TTCBCCCCCGGGEEECTTSCEE
T ss_pred --------CEEEEEEeCCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeEeCCCChhhEEECCCCCEE
Confidence 4899999999 5899999875432 234456679999999999996 8999999999999999999999
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc-
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN- 248 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~- 248 (778)
|+|||+++....... ......++..|+|||++.+ ..++.++|+|||||++|||++|.+||.......
T Consensus 159 L~DFG~a~~~~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~ 226 (345)
T 1xjd_A 159 IADFGMCKENMLGDA------KTNTFCGTPDYIAPEILLG------QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL 226 (345)
T ss_dssp ECCCTTCBCCCCTTC------CBCCCCSCGGGCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred EeEChhhhhcccCCC------cccCCCCCcccCChhhhcC------CCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHH
Confidence 999999986533211 1122345668999999876 357789999999999999999999986432111
Q ss_pred -----------cCCCCcchHHHHHHHhccCCCCCCChH-HHHhcc
Q 004025 249 -----------TASIPKSLLPDYQRLLSSMPSRRLNSS-KLIENS 281 (778)
Q Consensus 249 -----------~~~iP~~L~~~i~~lL~~dP~~Rps~~-~lL~~~ 281 (778)
...++..+.+++++||..||.+||++. ++++|+
T Consensus 227 ~~~i~~~~~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp 271 (345)
T 1xjd_A 227 FHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHP 271 (345)
T ss_dssp HHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSG
T ss_pred HHHHHhCCCCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHcCc
Confidence 123567788999999999999999998 999998
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=312.66 Aligned_cols=236 Identities=18% Similarity=0.199 Sum_probs=194.9
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch----hHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD----GHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~----~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
..|++++.||.|+ | +||+|+++.+|+.|+||++....... ...+.+.+|+++|+.++||||++++++++..
T Consensus 12 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-- 87 (321)
T 2a2a_A 12 DFYDIGEELGSGQFA--IVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENR-- 87 (321)
T ss_dssp HHEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS--
T ss_pred ccEEEeeEeeecCCE--EEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecC--
Confidence 3699999999998 8 99999999999999999998754322 2356789999999999999999999999864
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC----c
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL----D 167 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g----~ 167 (778)
..+|+||||+ ++|.+++.... ......+..++.||+.||.|||+ .+++||||||+||+++.+| .
T Consensus 88 ------~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~-~~ivH~dikp~NIl~~~~~~~~~~ 157 (321)
T 2a2a_A 88 ------TDVVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHT-KKIAHFDLKPENIMLLDKNIPIPH 157 (321)
T ss_dssp ------SEEEEEECCCCSCBHHHHHHTCS---CEEHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEESCTTSSSCC
T ss_pred ------CEEEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCChHHEEEecCCCCcCC
Confidence 4899999999 47999987643 22345566779999999999996 8999999999999999888 7
Q ss_pred EEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-
Q 004025 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL- 246 (778)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l- 246 (778)
+||+|||++........ .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||.....
T Consensus 158 ~kl~Dfg~~~~~~~~~~-------~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 224 (321)
T 2a2a_A 158 IKLIDFGLAHEIEDGVE-------FKNIFGTPEFVAPEIVNY------EPLGLEADMWSIGVITYILLSGASPFLGDTKQ 224 (321)
T ss_dssp EEECCCTTCEECCTTCC-------CCCCCSCGGGCCHHHHTT------CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH
T ss_pred EEEccCccceecCcccc-------ccccCCCCCccCcccccC------CCCCCccccHHHHHHHHHHHHCCCCCCCCCHH
Confidence 99999999987754321 112234568999999876 3567899999999999999999998854211
Q ss_pred ---hc------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 ---RN------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ---~~------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. ...+|..+.+++.+||..||.+||++.++++|+
T Consensus 225 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp 274 (321)
T 2a2a_A 225 ETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHP 274 (321)
T ss_dssp HHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHST
T ss_pred HHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCc
Confidence 11 135677789999999999999999999999998
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-35 Score=320.24 Aligned_cols=251 Identities=18% Similarity=0.298 Sum_probs=200.3
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.||.|+ | +||+|+++.++..|+||++... ........+.+|+++|++|+||||+++++++.......
T Consensus 27 ~~y~~~~~lG~G~~g--~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~-- 101 (364)
T 3qyz_A 27 PRYTNLSYIGEGAYG--MVCSAYDNLNKVRVAIKKISPF-EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ-- 101 (364)
T ss_dssp TTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEECCT-TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTT--
T ss_pred ccEEEEEEeecCCCe--EEEEEEECCCCeEEEEEEeccc-cCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccc--
Confidence 4799999999998 8 9999999999999999999753 23345577889999999999999999999997543111
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
...+||||||+ ++|.++++.... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 102 -~~~~~iv~e~~~~~L~~~l~~~~~----~~~~~~~i~~qi~~aL~~LH~-~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 175 (364)
T 3qyz_A 102 -MKDVYIVQDLMETDLYKLLKTQHL----SNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKICDFGLA 175 (364)
T ss_dssp -CCCEEEEEECCSEEHHHHHHHCCC----CHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred -cceEEEEEcccCcCHHHHHHhCCC----CHHHHHHHHHHHHHHHHHHHH-CCeecCCCChHhEEECCCCCEEEEeCcce
Confidence 24799999999 579998877542 344566779999999999996 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----hc----
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN---- 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~~---- 248 (778)
........... ......++..|+|||++.+. ..++.++|+|||||++|+|++|.+||..... ..
T Consensus 176 ~~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-----~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~ 247 (364)
T 3qyz_A 176 RVADPDHDHTG---FLTEYVATRWYRAPEIMLNS-----KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 247 (364)
T ss_dssp EECCGGGCBCC---TTCCCCSCGGGCCHHHHHTB-----CSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHH
T ss_pred EecCCCCCccc---cccccccccCCCCCHHhcCC-----CCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHH
Confidence 87654221110 01123455689999987653 3567899999999999999999998853211 00
Q ss_pred -----------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcccCCcccccccc
Q 004025 249 -----------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQ 292 (778)
Q Consensus 249 -----------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff~ 292 (778)
...++..+.+++.+||..||.+||++.++++|+ |+..++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp----~~~~~~~ 322 (364)
T 3qyz_A 248 LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP----YLEQYYD 322 (364)
T ss_dssp HCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSG----GGTTTCC
T ss_pred hCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCc----chhhccC
Confidence 134567789999999999999999999999999 6666554
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-35 Score=320.94 Aligned_cols=237 Identities=17% Similarity=0.250 Sum_probs=186.1
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|.+.+.||.|+ | +||+|+++.+++.|+||++....... ....+.+|+++|+.++||||++++++++.+
T Consensus 3 ~y~~~~~lG~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------- 72 (324)
T 3mtl_A 3 TYIKLDKLGEGTYA--TVYKGKSKLTDNLVALKEIRLEHEEG-APCTAIREVSLLKDLKHANIVTLHDIIHTE------- 72 (324)
T ss_dssp SEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEEECS-------
T ss_pred ceEEEEEEcCCCCE--EEEEEEECCCCcEEEEEEEecccccc-cchhHHHHHHHHHhcCCCCCCeeeeEEeeC-------
Confidence 699999999998 8 99999999999999999997543221 112345799999999999999999999864
Q ss_pred ccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 99 ~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
..+||||||+ ++|.+++...+.. .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++.
T Consensus 73 -~~~~lv~e~~~~~l~~~~~~~~~~--~~~~~~~~~~~qi~~aL~~LH~-~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~ 148 (324)
T 3mtl_A 73 -KSLTLVFEYLDKDLKQYLDDCGNI--INMHNVKLFLFQLLRGLAYCHR-QKVLHRDLKPQNLLINERGELKLADFGLAR 148 (324)
T ss_dssp -SCEEEEEECCSEEHHHHHHHTTTC--CCHHHHHHHHHHHHHHHHHHHH-TTEEESSCCGGGEEECTTCCEEECSSSEEE
T ss_pred -CEEEEEecccccCHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHH-CCccCCCcCHHHEEECCCCCEEEccCcccc
Confidence 3799999999 6788888775421 2344466679999999999996 899999999999999999999999999998
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh----------
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---------- 247 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~---------- 247 (778)
........ .....++..|+|||++.+. ..++.++|+|||||++|+|++|.+||......
T Consensus 149 ~~~~~~~~------~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~ 217 (324)
T 3mtl_A 149 AKSIPTKT------YDNEVVTLWYRPPDILLGS-----TDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRIL 217 (324)
T ss_dssp CC------------------CGGGCCHHHHTTC-----CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred cccCCccc------cccccCcccccChhhhcCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 65432111 1122345689999998753 35678999999999999999999988542210
Q ss_pred --------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 --------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 --------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++++||..||.+||++.++++|+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 283 (324)
T 3mtl_A 218 GTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHP 283 (324)
T ss_dssp CCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSG
T ss_pred CCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcCh
Confidence 0123566788999999999999999999999998
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-35 Score=316.59 Aligned_cols=241 Identities=15% Similarity=0.231 Sum_probs=185.6
Q ss_pred CCCCCCceeccCCCCCC-CceEEEEeEEC---CCCCcEEEEEEeCCCCc--hhHHHHHHHHHHHHhcCCCCCeeeEeeee
Q 004025 15 GVKDLPYNIGDPYPSAW-GSWSHFQGTSK---DDGSPVSIFSISGTNAQ--DGHLAAARNGVKRLRTVRHPNILAFLHST 88 (778)
Q Consensus 15 ~~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k---~~g~~VaIK~~~~~~~~--~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~ 88 (778)
.+...+|++.+.||.|+ | +||+|++. .+|+.|+||++.+.... ......+.+|+++|+.++||||+++++++
T Consensus 13 ~~~~~~y~~~~~lG~G~~g--~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~ 90 (327)
T 3a62_A 13 KIRPECFELLRVLGKGGYG--KVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAF 90 (327)
T ss_dssp CCCGGGEEEEEEEEEETTE--EEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEE
T ss_pred CCCHHHeEEEEEEEeCCCE--EEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEE
Confidence 34456799999999998 8 99999985 68999999999865321 23345678999999999999999999999
Q ss_pred EecccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC
Q 004025 89 EVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL 166 (778)
Q Consensus 89 e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g 166 (778)
+.+ ..+||||||| ++|.+++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|
T Consensus 91 ~~~--------~~~~lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~qi~~al~~lH~-~~ivH~Dlkp~Nill~~~~ 158 (327)
T 3a62_A 91 QTG--------GKLYLILEYLSGGELFMQLEREGIF---MEDTACFYLAEISMALGHLHQ-KGIIYRDLKPENIMLNHQG 158 (327)
T ss_dssp ECS--------SCEEEEEECCTTEEHHHHHHHHSSC---CHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCTTTEEECTTS
T ss_pred EcC--------CEEEEEEeCCCCCcHHHHHHhCCCC---CHHHHHHHHHHHHHHHHHHHh-CCEEcccCCHHHeEECCCC
Confidence 874 3899999999 4799999876532 344466679999999999996 8999999999999999999
Q ss_pred cEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh
Q 004025 167 DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL 246 (778)
Q Consensus 167 ~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l 246 (778)
.+||+|||++........ ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||.....
T Consensus 159 ~~kl~Dfg~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~pf~~~~~ 226 (327)
T 3a62_A 159 HVKLTDFGLCKESIHDGT------VTHTFCGTIEYMAPEILMR------SGHNRAVDWWSLGALMYDMLTGAPPFTGENR 226 (327)
T ss_dssp CEEECCCSCC----------------CTTSSCCTTSCHHHHTT------SCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred cEEEEeCCcccccccCCc------cccccCCCcCccCHhhCcC------CCCCCcccchhHHHHHHHHHHCCCCCCCCCH
Confidence 999999999876543211 1112345668999999876 3567899999999999999999999864321
Q ss_pred h--------c----cCCCCcchHHHHHHHhccCCCCCC-----ChHHHHhcc
Q 004025 247 R--------N----TASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENS 281 (778)
Q Consensus 247 ~--------~----~~~iP~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~ 281 (778)
. . ...++..+.+++++||..||.+|| ++.++++|+
T Consensus 227 ~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp 278 (327)
T 3a62_A 227 KKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHP 278 (327)
T ss_dssp HHHHHHHHHTCCCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSG
T ss_pred HHHHHHHHhCCCCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCC
Confidence 1 1 134567789999999999999999 788999998
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-34 Score=305.97 Aligned_cols=239 Identities=15% Similarity=0.157 Sum_probs=195.6
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
...|.+.+.||.|+ | +||+|+++.++..|+||++..........+.+.+|+++|+.++||||++++++++....+
T Consensus 25 ~~~~~~~~~lg~G~~g--~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~-- 100 (290)
T 1t4h_A 25 GRFLKFDIEIGRGSFK--TVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKG-- 100 (290)
T ss_dssp SCEEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSS--
T ss_pred ceeEEeeeeccCCCCe--EEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCC--
Confidence 34599999999998 8 999999999999999999987655556677899999999999999999999998764322
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCC--ccccccCCCCeEEc-CCCcEEEE
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCK--LVHGNVCLSSVVVT-QTLDWKLH 171 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~--ivH~dLkp~NI~v~-~~g~~KL~ 171 (778)
...+|+||||+ ++|.+++...... ....+..++.||+.||.|||+ .+ ++||||||+||+++ .+|.+||+
T Consensus 101 --~~~~~lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~qi~~~l~~lH~-~~~~i~H~dikp~Nil~~~~~~~~kl~ 174 (290)
T 1t4h_A 101 --KKCIVLVTELMTSGTLKTYLKRFKVM---KIKVLRSWCRQILKGLQFLHT-RTPPIIHRDLKCDNIFITGPTGSVKIG 174 (290)
T ss_dssp --CEEEEEEEECCCSCBHHHHHHHHSSC---CHHHHHHHHHHHHHHHHHHHT-SSSCCCCSCCCGGGEEESSTTSCEEEC
T ss_pred --CceEEEEEEecCCCCHHHHHHHccCC---CHHHHHHHHHHHHHHHHHHHc-CCCCEEECCCCHHHEEEECCCCCEEEe
Confidence 45899999999 4799999875432 234456669999999999995 77 99999999999998 88999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----h-
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----L- 246 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l- 246 (778)
|||++....... .....++..|+|||++.+ .++.++|+|||||++|+|++|..||.... .
T Consensus 175 Dfg~~~~~~~~~--------~~~~~~t~~y~aPE~~~~-------~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~ 239 (290)
T 1t4h_A 175 DLGLATLKRASF--------AKAVIGTPEFMAPEMYEE-------KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIY 239 (290)
T ss_dssp CTTGGGGCCTTS--------BEESCSSCCCCCGGGGGT-------CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHH
T ss_pred eCCCcccccccc--------cccccCCcCcCCHHHHhc-------cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHH
Confidence 999997654321 122345668999998764 36789999999999999999998885411 0
Q ss_pred h----------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 R----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ~----------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. .....+..+.+++.+||..||.+||++.++++|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~ 284 (290)
T 1t4h_A 240 RRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHA 284 (290)
T ss_dssp HHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred HHHhccCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCc
Confidence 0 0123456789999999999999999999999998
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-35 Score=321.21 Aligned_cols=236 Identities=17% Similarity=0.174 Sum_probs=185.1
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|++.+.||.|+ | +||.++++.+++.|+||++...... .+.+++|+..++.|+||||+++++++.+.
T Consensus 18 ~~~~y~~~~~lG~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~~~~~~~~~---- 88 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFG--VARLMRDKLTKELVAVKYIERGAAI---DENVQREIINHRSLRHPNIVRFKEVILTP---- 88 (361)
T ss_dssp CTTTEEEEEEESSSTTS--SEEEEEETTTCCEEEEEEEESSTTS---CHHHHHHHHHHHHCCCTTBCCEEEEEECS----
T ss_pred CCCcEEEEEEeccCCCE--EEEEEEECCCCcEEEEEEEecCccc---cHHHHHHHHHHHhCCCCCCCcEEEEEeeC----
Confidence 346799999999999 8 8999999999999999999865332 24578999999999999999999999864
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCc--EEEE
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD--WKLH 171 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~--~KL~ 171 (778)
..+||||||| ++|.+++...+. .....+..++.||+.||.|||+ .+++||||||+||+++.++. +||+
T Consensus 89 ----~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~ql~~~L~~LH~-~~ivH~Dlkp~Nill~~~~~~~~kl~ 160 (361)
T 3uc3_A 89 ----THLAIIMEYASGGELYERICNAGR---FSEDEARFFFQQLLSGVSYCHS-MQICHRDLKLENTLLDGSPAPRLKIC 160 (361)
T ss_dssp ----SEEEEEEECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHH-TTCCSCCCCGGGEEECSSSSCCEEEC
T ss_pred ----CEEEEEEEeCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEEcCCCCceEEEe
Confidence 4899999999 579999877553 2344566779999999999996 99999999999999987776 9999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-----
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----- 246 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----- 246 (778)
|||+++...... ......++..|+|||++.+. .....++|+|||||++|+|++|..||.....
T Consensus 161 Dfg~a~~~~~~~-------~~~~~~gt~~y~aPE~~~~~-----~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~ 228 (361)
T 3uc3_A 161 DFGYSKSSVLHS-------QPKSTVGTPAYIAPEVLLRQ-----EYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYR 228 (361)
T ss_dssp CCCCC----------------------CTTSCHHHHHCS-----SCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHH
T ss_pred ecCccccccccC-------CCCCCcCCCCcCChhhhcCC-----CCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHH
Confidence 999987543211 11223456799999998763 2233458999999999999999999864211
Q ss_pred ---h----c------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 ---R----N------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ---~----~------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. . ...++..+.+++.+||..||.+||++.++++|+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp 276 (361)
T 3uc3_A 229 KTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHS 276 (361)
T ss_dssp HHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSH
T ss_pred HHHHHHhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCc
Confidence 0 0 124677889999999999999999999999998
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-35 Score=316.35 Aligned_cols=241 Identities=15% Similarity=0.177 Sum_probs=188.0
Q ss_pred CCCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 15 GVKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 15 ~~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
.+...+|++.+.||.|+ | +||+|++ +|+.|+||++..........+.+.+|+++|++++||||++++++++..
T Consensus 33 ~i~~~~y~i~~~lG~G~~g--~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-- 106 (309)
T 3p86_A 33 DIPWCDLNIKEKIGAGSFG--TVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQP-- 106 (309)
T ss_dssp BCCGGGEEEEEEEEECSSE--EEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST--
T ss_pred cCChhHceeeeEeecCCCe--EEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC--
Confidence 45666899999999998 8 9999987 588999999987665556677889999999999999999999999864
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCC--ccccccCCCCeEEcCCCcEE
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCK--LVHGNVCLSSVVVTQTLDWK 169 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~--ivH~dLkp~NI~v~~~g~~K 169 (778)
..+||||||+ ++|.+++.............+..++.||+.||.|||+ .+ ++||||||+||+++.+|.+|
T Consensus 107 ------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~ivH~Dikp~NIll~~~~~~k 179 (309)
T 3p86_A 107 ------PNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN-RNPPIVHRNLKSPNLLVDKKYTVK 179 (309)
T ss_dssp ------TCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHT-SSSCCCCTTCCGGGEEECTTCCEE
T ss_pred ------CceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCCEECCCCChhhEEEeCCCcEE
Confidence 3789999999 4899999865421112334456679999999999995 88 99999999999999999999
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh--
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-- 247 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~-- 247 (778)
|+|||++....... .......++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 180 L~Dfg~a~~~~~~~------~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~ 247 (309)
T 3p86_A 180 VCDFGLSRLKASTF------LSSKSAAGTPEWMAPEVLRD------EPSNEKSDVYSFGVILWELATLQQPWGNLNPAQV 247 (309)
T ss_dssp ECCCC-----------------------CCTTSCHHHHTT------CCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHH
T ss_pred ECCCCCCccccccc------cccccCCCCccccChhhhcC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 99999987554321 11122345668999999886 35678999999999999999999998643211
Q ss_pred ------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 ------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 ------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+|..+.+++++||..+|.+||++.++++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~ 292 (309)
T 3p86_A 248 VAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDL 292 (309)
T ss_dssp HHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 113567788999999999999999999999874
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-35 Score=322.34 Aligned_cols=247 Identities=17% Similarity=0.240 Sum_probs=190.5
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.||.|+ | +||+|+++.+|+.|+||++............+.+|+.+++.++||||+++++++...... .
T Consensus 25 ~~y~~~~~lG~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~--~ 100 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQG--IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL--E 100 (371)
T ss_dssp TTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCST--T
T ss_pred hheeEeeeeEecCCE--EEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccc--c
Confidence 4799999999998 8 999999999999999999987655555667788999999999999999999999754310 0
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
....+||||||+ ++|.+++... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 101 ~~~~~~lv~e~~~~~l~~~~~~~-----~~~~~~~~i~~qi~~al~~lH~-~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 174 (371)
T 2xrw_A 101 EFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLA 174 (371)
T ss_dssp TCCEEEEEEECCSEEHHHHHHSC-----CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEECTTSCEEECCCCC-
T ss_pred cccceEEEEEcCCCCHHHHHhhc-----cCHHHHHHHHHHHHHHHHHHHH-CCeecccCCHHHEEEcCCCCEEEEEeecc
Confidence 124899999999 5788877531 2344566779999999999996 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----hcc---
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RNT--- 249 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~~~--- 249 (778)
....... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||..... ..+
T Consensus 175 ~~~~~~~-------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~ 241 (371)
T 2xrw_A 175 RTAGTSF-------MMTPYVVTRYYRAPEVILG------MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 241 (371)
T ss_dssp ----------------------CTTCCHHHHTT------CCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-
T ss_pred ccccccc-------ccCCceecCCccCHHHhcC------CCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 8764321 1112345668999999876 3577899999999999999999998854211 000
Q ss_pred -----------------------CC------------------------CCcchHHHHHHHhccCCCCCCChHHHHhccc
Q 004025 250 -----------------------AS------------------------IPKSLLPDYQRLLSSMPSRRLNSSKLIENSV 282 (778)
Q Consensus 250 -----------------------~~------------------------iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~ 282 (778)
.. .+..+.+++++||..||.+|||+.++++|+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp- 320 (371)
T 2xrw_A 242 LGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP- 320 (371)
T ss_dssp CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSH-
T ss_pred hCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCc-
Confidence 00 023467889999999999999999999999
Q ss_pred CCcccccccc
Q 004025 283 GDFWMTEYFQ 292 (778)
Q Consensus 283 ~~~w~~~ff~ 292 (778)
|+..++.
T Consensus 321 ---~~~~~~~ 327 (371)
T 2xrw_A 321 ---YINVWYD 327 (371)
T ss_dssp ---HHHTTCC
T ss_pred ---chhhhcC
Confidence 6665554
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-35 Score=320.37 Aligned_cols=240 Identities=19% Similarity=0.239 Sum_probs=185.7
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch---hHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD---GHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~---~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
..+|++.+.||.|+ | +||.|+++.+|+.|+||++......+ ...+.+.+|+++++.++||||++++++++..
T Consensus 9 ~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-- 84 (346)
T 1ua2_A 9 AKRYEKLDFLGEGQFA--TVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHK-- 84 (346)
T ss_dssp ----CEEEEEEEETTE--EEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCT--
T ss_pred hcccEEEeEEeecCCE--EEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeC--
Confidence 45799999999998 8 99999999999999999997543221 2234678999999999999999999999763
Q ss_pred ccCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 94 DATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+||||||+ ++|..++...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 85 ------~~~~lv~e~~~~~l~~~~~~~~~~--~~~~~~~~~~~qi~~~l~~lH~-~~ivH~Dlkp~Nil~~~~~~~kl~D 155 (346)
T 1ua2_A 85 ------SNISLVFDFMETDLEVIIKDNSLV--LTPSHIKAYMLMTLQGLEYLHQ-HWILHRDLKPNNLLLDENGVLKLAD 155 (346)
T ss_dssp ------TCCEEEEECCSEEHHHHHTTCCSS--CCSSHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEECTTCCEEECC
T ss_pred ------CceEEEEEcCCCCHHHHHHhcCcC--CCHHHHHHHHHHHHHHHHHHHH-CCEECCCCCHHHEEEcCCCCEEEEe
Confidence 3799999999 5788887654321 1223356669999999999996 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----hc
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN 248 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~~ 248 (778)
||++..+...... .....++..|+|||++.+. ..++.++|+|||||++|||++|.++|..... ..
T Consensus 156 fg~a~~~~~~~~~------~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~ 224 (346)
T 1ua2_A 156 FGLAKSFGSPNRA------YTHQVVTRWYRAPELLFGA-----RMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTR 224 (346)
T ss_dssp CGGGSTTTSCCCC------CCCSCCCCTTCCHHHHTTC-----SCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred cccceeccCCccc------CCcccccccccCchHhhCC-----CCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence 9999877543211 1122456689999998653 3467899999999999999999988754210 00
Q ss_pred ------------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ------------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++++||..||.+||++.++++|+
T Consensus 225 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~ 293 (346)
T 1ua2_A 225 IFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK 293 (346)
T ss_dssp HHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred HHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcCh
Confidence 023446788999999999999999999999998
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-35 Score=324.43 Aligned_cols=243 Identities=14% Similarity=0.209 Sum_probs=196.3
Q ss_pred CCCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecc
Q 004025 15 GVKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (778)
Q Consensus 15 ~~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~ 92 (778)
.+...+|++.+.||.|+ | +||.|+++.+++.|+||++.+.... ......+.+|+++|+.++||||+++++++.++
T Consensus 11 ~v~~~~y~i~~~LG~G~fG--~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~- 87 (384)
T 4fr4_A 11 DVNFDHFEILRAIGKGSFG--KVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDE- 87 (384)
T ss_dssp CCCGGGEEEEEEEECCTTC--CEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS-
T ss_pred CCChHHeEEEEEEeeCCCe--EEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC-
Confidence 34456799999999999 8 8999999999999999999753211 13356788999999999999999999999874
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEE
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
..+|+||||| ++|..++..... .....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||
T Consensus 88 -------~~~~lv~e~~~gg~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~LH~-~givHrDlkp~NIll~~~g~vkL 156 (384)
T 4fr4_A 88 -------EDMFMVVDLLLGGDLRYHLQQNVH---FKEETVKLFICELVMALDYLQN-QRIIHRDMKPDNILLDEHGHVHI 156 (384)
T ss_dssp -------SEEEEEECCCTTEEHHHHHHTTCC---CCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECTTSCEEE
T ss_pred -------CEEEEEEecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCceeccCcHHHeEECCCCCEEE
Confidence 4899999999 479999886532 2344566779999999999996 89999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---- 246 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l---- 246 (778)
+|||++..+..... .....++..|+|||++.+.. ...++.++|+|||||++|||++|..||.....
T Consensus 157 ~DFG~a~~~~~~~~-------~~~~~gt~~Y~aPE~~~~~~---~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~ 226 (384)
T 4fr4_A 157 TDFNIAAMLPRETQ-------ITTMAGTKPYMAPEMFSSRK---GAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSK 226 (384)
T ss_dssp CCCTTCEECCTTCC-------BCCCCSCGGGCCGGGTCCCS---SCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHH
T ss_pred eccceeeeccCCCc-------eeccCCCccccCCeeeccCC---CCCCCccceeechHHHHHHHHhCCCCCCCCCCccHH
Confidence 99999987654211 12234566899999986420 13467899999999999999999999853110
Q ss_pred -------hc----cCCCCcchHHHHHHHhccCCCCCCC-hHHHHhcc
Q 004025 247 -------RN----TASIPKSLLPDYQRLLSSMPSRRLN-SSKLIENS 281 (778)
Q Consensus 247 -------~~----~~~iP~~L~~~i~~lL~~dP~~Rps-~~~lL~~~ 281 (778)
.. ...++..+.+++++||..||.+||+ +.++++|+
T Consensus 227 ~~~~~~~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp 273 (384)
T 4fr4_A 227 EIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFP 273 (384)
T ss_dssp HHHHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSG
T ss_pred HHHHHHhhcccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcCh
Confidence 01 1345677899999999999999998 88999997
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-35 Score=306.56 Aligned_cols=237 Identities=14% Similarity=0.147 Sum_probs=191.6
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecccccC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~g~ 96 (778)
.+|++.+.||.|+ | +||+|+++.+++.|+||++............+.+|+..+..+ +||||+++++++..+
T Consensus 11 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~----- 83 (289)
T 1x8b_A 11 TEFHELEKIGSGEFG--SVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAED----- 83 (289)
T ss_dssp HHEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEET-----
T ss_pred chhhhhhhhcCCCce--EEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecC-----
Confidence 4699999999998 7 999999999999999999987655555566788999999999 899999999999864
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCc-CCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC-------
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL------- 166 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g------- 166 (778)
..+||||||+ ++|.+++..... ........+..++.||+.||.|||+ .+++||||||+||+++.+|
T Consensus 84 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~-~~ivH~Dikp~NIl~~~~~~~~~~~~ 159 (289)
T 1x8b_A 84 ---DHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS-MSLVHMDIKPSNIFISRTSIPNAASE 159 (289)
T ss_dssp ---TEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEEC----------
T ss_pred ---CeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHh-CCEeecCCCHHHEEEcCCCCCccccc
Confidence 4899999999 489999987532 1222345567779999999999996 8999999999999998544
Q ss_pred ------------cEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHH
Q 004025 167 ------------DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYEL 234 (778)
Q Consensus 167 ------------~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel 234 (778)
.+||+|||++........ ..++..|+|||++.+. ..++.++|+|||||++|+|
T Consensus 160 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~----------~~gt~~y~aPE~~~~~-----~~~~~~~Di~slG~il~~l 224 (289)
T 1x8b_A 160 EGDEDDWASNKVMFKIGDLGHVTRISSPQV----------EEGDSRFLANEVLQEN-----YTHLPKADIFALALTVVCA 224 (289)
T ss_dssp ----------CCCEEECCCTTCEETTCSCC----------CCCCGGGCCHHHHTTC-----CTTHHHHHHHHHHHHHHHH
T ss_pred ccccccccCCceEEEEcccccccccCCccc----------cCCCccccChhHhcCC-----CCCCchhhHHHHHHHHHHH
Confidence 799999999987754211 1245589999998763 2445689999999999999
Q ss_pred HhCCCCCChhh-hhc---------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 235 FSGMRLSKTEE-LRN---------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 235 ~tg~~p~~~~~-l~~---------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
++|.+++.... ... ...+|..+.+++.+||..||.+||++.++++|+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~ 281 (289)
T 1x8b_A 225 AGAEPLPRNGDQWHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHS 281 (289)
T ss_dssp TTCCCCCSSSHHHHHHHTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCT
T ss_pred hcCCCCCcchhHHHHHHcCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhCh
Confidence 99987664322 111 135677899999999999999999999999998
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=307.20 Aligned_cols=237 Identities=18% Similarity=0.266 Sum_probs=189.3
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..|.+.+.||.|+ | +||+|+++.++..|+||++...... ...+.+.+|+++|+.++||||++++++++..
T Consensus 22 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~------ 92 (285)
T 3is5_A 22 DLFIFKRKLGSGAFG--DVHLVEERSSGLERVIKTINKDRSQ-VPMEQIEAEIEVLKSLDHPNIIKIFEVFEDY------ 92 (285)
T ss_dssp HHEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEEEGGGCC-SCHHHHHHHHHHHHTCCCTTBCCEEEEEECS------
T ss_pred hheeecceeccCCCe--EEEEEEEccCCceEEEEEeeccccc-hhHHHHHHHHHHHHhCCCchHHhHHHheecC------
Confidence 4699999999998 8 9999999999999999999865322 2356788999999999999999999999863
Q ss_pred cccEEEEEecCC--cChHHHHHHhC-cCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEE---cCCCcEEEE
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELG-LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV---TQTLDWKLH 171 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~-~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v---~~~g~~KL~ 171 (778)
..+|+||||+ ++|.+++.... .........+..++.||+.||.|||+ .+++||||||+||++ +.++.+||+
T Consensus 93 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~-~~ivH~dikp~NIl~~~~~~~~~~kl~ 169 (285)
T 3is5_A 93 --HNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS-QHVVHKDLKPENILFQDTSPHSPIKII 169 (285)
T ss_dssp --SEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCSGGGEEESSSSTTCCEEEC
T ss_pred --CeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHh-CCEEECCCCHHHEEEecCCCCCCEEEE
Confidence 4899999999 47888886542 11223345566779999999999996 899999999999999 456889999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc---
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN--- 248 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~--- 248 (778)
|||++........ .....++..|+|||++.+ .++.++|+|||||++|+|++|..||.......
T Consensus 170 Dfg~a~~~~~~~~-------~~~~~~t~~y~aPE~~~~-------~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~ 235 (285)
T 3is5_A 170 DFGLAELFKSDEH-------STNAAGTALYMAPEVFKR-------DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQ 235 (285)
T ss_dssp CCCCCCC-----------------CTTGGGCCHHHHTT-------CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred eeecceecCCccc-------CcCcccccCcCChHHhcc-------CCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHh
Confidence 9999977654211 112234558999999864 45679999999999999999999986432111
Q ss_pred ------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+++.+.+++++||..||.+||++.++++|+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp 280 (285)
T 3is5_A 236 KATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHE 280 (285)
T ss_dssp HHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTSG
T ss_pred hhccCCcccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcCH
Confidence 124677899999999999999999999999998
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-34 Score=309.57 Aligned_cols=250 Identities=18% Similarity=0.153 Sum_probs=189.1
Q ss_pred CCCCCCceec-cCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEec
Q 004025 15 GVKDLPYNIG-DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVE 91 (778)
Q Consensus 15 ~~~~~~Y~i~-~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e 91 (778)
+-....|++. +.||.|+ | +||+|+++.+++.|+||++..... .....+.+|+++|+++ +||||++++++++.+
T Consensus 8 ~~~~~~y~i~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~ 83 (316)
T 2ac3_A 8 GRFEDVYQLQEDVLGEGAHA--RVQTCINLITSQEYAVKIIEKQPG--HIRSRVFREVEMLYQCQGHRNVLELIEFFEEE 83 (316)
T ss_dssp CCTTTSCEECCCCCCCCSSE--EEEEEECSSSCCEEEEEEEECCSS--CCHHHHHHHHHHHHHTCCCTTBCCEEEEEEET
T ss_pred cccceeEEecCceecCCceE--EEEEEEEcCCCcEEEEEEEeeCcc--hhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeC
Confidence 3455679995 7799998 7 999999999999999999986532 2355788999999985 799999999999874
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCc--
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD-- 167 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~-- 167 (778)
..+||||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.++.
T Consensus 84 --------~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~lH~-~~ivH~dlkp~Nil~~~~~~~~ 151 (316)
T 2ac3_A 84 --------DRFYLVFEKMRGGSILSHIHKRRH---FNELEASVVVQDVASALDFLHN-KGIAHRDLKPENILCEHPNQVS 151 (316)
T ss_dssp --------TEEEEEEECCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEESCSSSSC
T ss_pred --------CEEEEEEEcCCCCcHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHh-CCceeCCCCHHHEEEccCCCcC
Confidence 4899999999 589999987643 2344466779999999999996 89999999999999998776
Q ss_pred -EEEEecccccccCCCCCCCCCC-ccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh
Q 004025 168 -WKLHAFDVLSEFDGNNEAANGP-MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE 245 (778)
Q Consensus 168 -~KL~dFgla~~~~~~~~~~~~~-~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~ 245 (778)
+||+|||++............. .......++..|+|||++.+... ....++.++|+|||||++|||++|..||....
T Consensus 152 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~ 230 (316)
T 2ac3_A 152 PVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSE-EASIYDKRCDLWSLGVILYILLSGYPPFVGRC 230 (316)
T ss_dssp SEEECCTTCCC-------------------CCSGGGCCHHHHHHTSH-HHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCC
T ss_pred ceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccc-cccCCCcccccHhHHHHHHHHHHCCCCCcccc
Confidence 9999999988765322111000 00112234568999999864100 00135678999999999999999999885321
Q ss_pred ------------------h-h----c--------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 246 ------------------L-R----N--------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 246 ------------------l-~----~--------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+ . . ...+|..+.+++++||..||.+||++.++++|+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp 297 (316)
T 2ac3_A 231 GSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHP 297 (316)
T ss_dssp CSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHST
T ss_pred cccccccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcCh
Confidence 0 0 0 124677889999999999999999999999998
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-34 Score=311.38 Aligned_cols=234 Identities=17% Similarity=0.223 Sum_probs=192.7
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..|++.+.||.|+ | +||+|+++.+|+.|+||++...... ..+.+.+|+.+++.++||||+++++++...
T Consensus 45 ~~~~~~~~lg~G~~g--~V~~a~~~~~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------ 114 (321)
T 2c30_A 45 LLLDSYVKIGEGSTG--IVCLAREKHSGRQVAVKMMDLRKQQ--RRELLFNEVVIMRDYQHFNVVEMYKSYLVG------ 114 (321)
T ss_dssp HHEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEETTTCC--SHHHHHHHHHHHTTCCCTTBCCEEEEEEET------
T ss_pred hhhhccEEeccCCCe--EEEEEEECCCCcEEEEEEEeccchh--HHHHHHHHHHHHHhCCCCCcceEEEEEEEC------
Confidence 3488888999998 8 9999999999999999999865332 355788999999999999999999999874
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+||||||+ ++|.+++.... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 115 --~~~~lv~e~~~~~~L~~~l~~~~----l~~~~~~~i~~qi~~~L~~LH~-~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 187 (321)
T 2c30_A 115 --EELWVLMEFLQGGALTDIVSQVR----LNEEQIATVCEAVLQALAYLHA-QGVIHRDIKSDSILLTLDGRVKLSDFGF 187 (321)
T ss_dssp --TEEEEEECCCCSCBHHHHHTTCC----CCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECTTCCEEECCCTT
T ss_pred --CEEEEEEecCCCCCHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECCCCcEEEeeeee
Confidence 3899999999 47988886543 2344566779999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh---------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------- 246 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l--------- 246 (778)
+......... .....++..|+|||++.+ ..++.++|+|||||++|||++|..||.....
T Consensus 188 ~~~~~~~~~~------~~~~~gt~~y~aPE~~~~------~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~ 255 (321)
T 2c30_A 188 CAQISKDVPK------RKSLVGTPYWMAPEVISR------SLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRD 255 (321)
T ss_dssp CEECCSSSCC------BCCCCSCGGGCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH
T ss_pred eeecccCccc------cccccCCccccCHhhhcC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Confidence 9876543211 112345568999999876 3567899999999999999999988854211
Q ss_pred ------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 ------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....+|..+.+++.+||..||.+||++.++++|+
T Consensus 256 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp 296 (321)
T 2c30_A 256 SPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHP 296 (321)
T ss_dssp SSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred CCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 11124677789999999999999999999999998
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=320.62 Aligned_cols=239 Identities=15% Similarity=0.182 Sum_probs=186.9
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHH-HhcCCCCCeeeEeeeeEeccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKR-LRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~-Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
...+|++.+.||.|+ | +||+|+++.++..|+||++.+..... .....+.+|..+ ++.++||||+++++++.++
T Consensus 36 ~~~~y~~~~~lG~G~fg--~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~-- 111 (373)
T 2r5t_A 36 KPSDFHFLKVIGKGSFG--KVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTA-- 111 (373)
T ss_dssp CGGGEEEEEEEECCTTC--EEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECS--
T ss_pred ChhheEEEEEEeeCCCe--EEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeC--
Confidence 445799999999998 8 99999999999999999998653322 234456677776 5778999999999999874
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
..+||||||| ++|..++...... ....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+
T Consensus 112 ------~~~~lv~E~~~gg~L~~~l~~~~~~---~~~~~~~~~~qi~~aL~~LH~-~givHrDlkp~NIll~~~g~ikL~ 181 (373)
T 2r5t_A 112 ------DKLYFVLDYINGGELFYHLQRERCF---LEPRARFYAAEIASALGYLHS-LNIVYRDLKPENILLDSQGHIVLT 181 (373)
T ss_dssp ------SEEEEEEECCCSCBHHHHHHHHSSC---CHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEECTTSCEEEC
T ss_pred ------CEEEEEEeCCCCCcHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHH-CCceecCCCHHHEEECCCCCEEEe
Confidence 4899999999 4799999875432 344566679999999999996 899999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh----
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---- 247 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~---- 247 (778)
|||+++....... ......++..|+|||++.+ ..++.++|+|||||++|||++|.+||......
T Consensus 182 DFG~a~~~~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~ 249 (373)
T 2r5t_A 182 DFGLCKENIEHNS------TTSTFCGTPEYLAPEVLHK------QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYD 249 (373)
T ss_dssp CCCBCGGGBCCCC------CCCSBSCCCCCCCHHHHTT------CCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHH
T ss_pred eCccccccccCCC------ccccccCCccccCHHHhCC------CCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 9999986433211 1223355679999999876 46788999999999999999999998643211
Q ss_pred ----c----cCCCCcchHHHHHHHhccCCCCCCCh----HHHHhcc
Q 004025 248 ----N----TASIPKSLLPDYQRLLSSMPSRRLNS----SKLIENS 281 (778)
Q Consensus 248 ----~----~~~iP~~L~~~i~~lL~~dP~~Rps~----~~lL~~~ 281 (778)
. ...++..+.+++++||..||.+|+++ .++++|+
T Consensus 250 ~i~~~~~~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~ 295 (373)
T 2r5t_A 250 NILNKPLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHV 295 (373)
T ss_dssp HHHHSCCCCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSG
T ss_pred HHHhcccCCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCc
Confidence 1 13567788999999999999999987 5888887
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-35 Score=320.95 Aligned_cols=240 Identities=14% Similarity=0.156 Sum_probs=190.8
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
..+|++.+.||.|+ | +||+|+++.+++.|+||++...... ...+.+++|+.+++.++||||++++++++.+
T Consensus 6 ~~~y~i~~~lG~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~----- 77 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYG--EVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYGHRREG----- 77 (323)
T ss_dssp TTCEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEEECS-----
T ss_pred hhhceeeeEEecCCCE--EEEEEEECCCCcEEEEEEEEccccc-chHHHHHHHHHHHHhCCCCCCCeEEEEEecC-----
Confidence 35799999999998 8 9999999999999999999865332 2345688999999999999999999999864
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+||||||| ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 78 ---~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~aL~~LH~-~givH~Dlkp~NIll~~~~~~kl~Dfg 150 (323)
T 3tki_A 78 ---NIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMAGVVYLHG-IGITHRDIKPENLLLDERDNLKISDFG 150 (323)
T ss_dssp ---SEEEEEEECCTTEEGGGGSBTTTB---CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECTTCCEEECCCT
T ss_pred ---CeEEEEEEcCCCCcHHHHHhhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCccccccchHHEEEeCCCCEEEEEee
Confidence 4899999999 478887765432 2344566779999999999996 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh--------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------- 246 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l-------- 246 (778)
++..+....... ......++..|+|||++.+. ..++.++|+|||||++|+|++|..||.....
T Consensus 151 ~a~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~-----~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~ 221 (323)
T 3tki_A 151 LATVFRYNNRER----LLNKMCGTLPYVAPELLKRR-----EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221 (323)
T ss_dssp TCEECEETTEEC----CBCSCCSCGGGSCHHHHHCS-----SBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHH
T ss_pred ccceeccCCccc----ccCCCccCcCccCcHHhccC-----CCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHH
Confidence 998664321110 01123445689999998763 2235689999999999999999999853211
Q ss_pred -------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 -------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 -------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....++..+.+++++||..||.+||++.++++|+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~ 263 (323)
T 3tki_A 222 KEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDR 263 (323)
T ss_dssp HTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCT
T ss_pred hcccccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhCh
Confidence 01135677889999999999999999999999998
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=306.29 Aligned_cols=242 Identities=19% Similarity=0.225 Sum_probs=195.7
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.||.|+ | +||+|+++.+|+.|+||++..........+.+.+|+++++.++||||+++++++..+.
T Consensus 6 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 78 (279)
T 2w5a_A 6 EDYEVLYTIGTGSYG--RCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRT----- 78 (279)
T ss_dssp GGEEEEEEEEECSSS--EEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGG-----
T ss_pred hheeeehhccCCCCc--EEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCC-----
Confidence 4799999999998 8 9999999999999999999876655566778999999999999999999999886543
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCC-CcchHHHHHHHHHHHHHHHHHHcCCC-----ccccccCCCCeEEcCCCcEE
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEG-SQRDEYYAWGLNQIAKAVSFLNNDCK-----LVHGNVCLSSVVVTQTLDWK 169 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~-~~~~~~i~~gl~QI~~aL~fLH~~~~-----ivH~dLkp~NI~v~~~g~~K 169 (778)
...+|+||||+ ++|.+++....... ......+..++.||+.||.|||+ .+ ++||||||+||+++.+|.+|
T Consensus 79 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~-~~~~~~~ivH~dl~p~NIl~~~~~~~k 156 (279)
T 2w5a_A 79 -NTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR-RSDGGHTVLHRDLKPANVFLDGKQNVK 156 (279)
T ss_dssp -GTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH-HC------CCCCCSGGGEEECSSSCEE
T ss_pred -CceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhc-ccCCCCeeEEeccchhhEEEcCCCCEE
Confidence 34899999999 47999987654211 12344566779999999999996 67 99999999999999999999
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh--
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-- 247 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~-- 247 (778)
|+|||++....... .......++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 157 l~dfg~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~ 224 (279)
T 2w5a_A 157 LGDFGLARILNHDT------SFAKTFVGTPYYMSPEQMNR------MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL 224 (279)
T ss_dssp ECCCCHHHHC---C------HHHHHHHSCCTTCCHHHHHC------C-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred EecCchheeecccc------ccccccCCCccccChHHhcc------CCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHH
Confidence 99999998765421 01112345568999999876 35678999999999999999999888643211
Q ss_pred -------c----cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -------N----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -------~----~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ...+|..+.+++.+||..+|.+||++.++++++
T Consensus 225 ~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~ 269 (279)
T 2w5a_A 225 AGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENP 269 (279)
T ss_dssp HHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred HHHHhhcccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence 0 124677889999999999999999999999997
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-35 Score=322.55 Aligned_cols=240 Identities=16% Similarity=0.259 Sum_probs=180.0
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.||.|+ | +||+|+++.+|+.|+||++............+.+|+++|+.|+||||+++++++...... .
T Consensus 29 ~~y~~~~~lG~G~~g--~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~--~ 104 (367)
T 2fst_X 29 ERYQNLSPVGSGAYG--SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSL--E 104 (367)
T ss_dssp TTEEEEEECC----C--CEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSG--G
T ss_pred CceEEeeEEeecCCe--EEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCcc--c
Confidence 4799999999998 8 899999999999999999987655555667788999999999999999999998753110 0
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
....+|+|+|++ ++|.++++... .....+..+++||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 105 ~~~~~~lv~e~~~~~L~~~~~~~~----l~~~~~~~i~~qi~~aL~~LH~-~givH~Dlkp~NIll~~~~~~kL~DFG~a 179 (367)
T 2fst_X 105 EFNDVYLVTHLMGADLNNIVKCQK----LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLA 179 (367)
T ss_dssp GCCCCEEEEECCCEECC-----CC----CCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEECTTCCEEECC----
T ss_pred cCCeEEEEecccCCCHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHH-CCeeeCCCCHhhEEECCCCCEEEeecccc
Confidence 024689999999 46888887633 2345567779999999999996 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hhc----
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRN---- 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~~---- 248 (778)
+..... .....++..|+|||++.+. ..++.++|+|||||++|||++|.+||.... +..
T Consensus 180 ~~~~~~---------~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~ 245 (367)
T 2fst_X 180 RHTADE---------MTGYVATRWYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 245 (367)
T ss_dssp --------------------CCCTTCCHHHHTTC-----CSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred cccccc---------CCCcCcCcCccChHHHcCC-----cCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 875432 1123456689999998763 357789999999999999999999885321 100
Q ss_pred -----------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -----------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -----------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++.+||..||.+||++.++|+|+
T Consensus 246 ~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp 313 (367)
T 2fst_X 246 VGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 313 (367)
T ss_dssp HCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred hCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcCh
Confidence 013455688999999999999999999999998
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-35 Score=316.35 Aligned_cols=238 Identities=20% Similarity=0.224 Sum_probs=189.6
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.||.|+ | +||+|+++.+|+.|+||++..........+.+.+|+++++.++||||++++++++..
T Consensus 25 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------ 96 (331)
T 4aaa_A 25 EKYENLGLVGEGSYG--MVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKK------ 96 (331)
T ss_dssp GGEEEEEEGGGGTTS--SEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET------
T ss_pred hhheeeeEEeecCCE--EEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecC------
Confidence 3699999999998 8 899999999999999999987665555667788999999999999999999999864
Q ss_pred cccEEEEEecCCc--ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+||||||+. .|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 97 --~~~~lv~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~qi~~~l~~LH~-~~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 170 (331)
T 4aaa_A 97 --KRWYLVFEFVDHTILDDLELFPNG---LDYQVVQKYLFQIINGIGFCHS-HNIIHRDIKPENILVSQSGVVKLCDFGF 170 (331)
T ss_dssp --TEEEEEEECCSEEHHHHHHHSTTC---CCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEECTTSCEEECCCTT
T ss_pred --CEEEEEEecCCcchHHHHHhhccC---CCHHHHHHHHHHHHHHHHHHHH-CCEEccCcChheEEEcCCCcEEEEeCCC
Confidence 48999999993 35555443322 2344566679999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh--------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~-------- 247 (778)
+..+...... .....++..|+|||++.+. ..++.++|+|||||++|+|++|.+||......
T Consensus 171 ~~~~~~~~~~------~~~~~~t~~y~aPE~~~~~-----~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~ 239 (331)
T 4aaa_A 171 ARTLAAPGEV------YDDEVATRWYRAPELLVGD-----VKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMM 239 (331)
T ss_dssp C------------------CCCCCTTCCHHHHTTC-----TTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred ceeecCCccc------cCCCcCCccccCcccccCC-----CCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHH
Confidence 9876542211 1122445689999998763 35678999999999999999999988532100
Q ss_pred -----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -----------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++.+||..||.+||++.++++|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp 308 (331)
T 4aaa_A 240 CLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHD 308 (331)
T ss_dssp HHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred HhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCc
Confidence 0124677899999999999999999999999998
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=330.86 Aligned_cols=244 Identities=20% Similarity=0.233 Sum_probs=197.3
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-----------hHHHHHHHHHHHHhcCCCCCeeeEe
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-----------GHLAAARNGVKRLRTVRHPNILAFL 85 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-----------~~~~~~~~ev~~Lk~LrHPnIlk~~ 85 (778)
...|.+.++||.|+ | +||+|+++.+++.||||++.+..... ...+.+.+|+++|++|+||||++++
T Consensus 35 ~~~Y~~~~~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~ 112 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYG--EVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLF 112 (504)
T ss_dssp GGTEEEEEEEEC--CE--EEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred ccceEEEeEecccCCe--EEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence 35799999999998 8 99999999999999999998653221 3356789999999999999999999
Q ss_pred eeeEecccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEc
Q 004025 86 HSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT 163 (778)
Q Consensus 86 d~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~ 163 (778)
+++++. ..+||||||| ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++
T Consensus 113 ~~~~~~--------~~~~lv~e~~~gg~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~lH~-~~ivH~Dlkp~Nil~~ 180 (504)
T 3q5i_A 113 DVFEDK--------KYFYLVTEFYEGGELFEQIINRHK---FDECDAANIMKQILSGICYLHK-HNIVHRDIKPENILLE 180 (504)
T ss_dssp EEEECS--------SEEEEEEECCTTCBHHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEES
T ss_pred EEEEcC--------CEEEEEEecCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeEeCCCcHHHEEEe
Confidence 999863 4899999999 479888877543 2344466679999999999996 8999999999999999
Q ss_pred CCC---cEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCC
Q 004025 164 QTL---DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL 240 (778)
Q Consensus 164 ~~g---~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p 240 (778)
.+| .+||+|||++........ .....++..|+|||++.+ .++.++|+|||||++|+|++|.+|
T Consensus 181 ~~~~~~~~kl~Dfg~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~-------~~~~~~DiwslG~il~~ll~g~~p 246 (504)
T 3q5i_A 181 NKNSLLNIKIVDFGLSSFFSKDYK-------LRDRLGTAYYIAPEVLKK-------KYNEKCDVWSCGVIMYILLCGYPP 246 (504)
T ss_dssp STTCCSSEEECCCTTCEECCTTSC-------BCCCCSCTTTCCHHHHTT-------CBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred cCCCCccEEEEECCCCEEcCCCCc-------cccccCCcCCCCHHHhcc-------CCCchHHHHHHHHHHHHHHhCCCC
Confidence 876 699999999987754311 122345668999999875 356799999999999999999999
Q ss_pred CChhhhh----------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcccCCccccccccc
Q 004025 241 SKTEELR----------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQN 293 (778)
Q Consensus 241 ~~~~~l~----------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff~n 293 (778)
|...... ....++..+.+++++||..||.+||++.++++|+ |+..+.++
T Consensus 247 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~----~~~~~~~~ 311 (504)
T 3q5i_A 247 FGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSR----WIKKYANN 311 (504)
T ss_dssp SCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH----HHHHTCCC
T ss_pred CCCCCHHHHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCH----hhhhchhc
Confidence 8643211 1146788899999999999999999999999999 77766543
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-35 Score=307.65 Aligned_cols=238 Identities=21% Similarity=0.336 Sum_probs=177.6
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
.+|++.+.||.|+ | +||+|+++.+|+.|+||++......+ ...+.+.+|+++++.++||||++++++++..
T Consensus 11 ~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 83 (278)
T 3cok_A 11 EDFKVGNLLGKGSFA--GVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDS----- 83 (278)
T ss_dssp GGEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECS-----
T ss_pred ccceeeeeecCCCce--EEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccC-----
Confidence 4699999999998 7 99999999999999999997532111 2356788999999999999999999999863
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 84 ---~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~Nili~~~~~~kl~dfg 157 (278)
T 3cok_A 84 ---NYVYLVLEMCHNGEMNRYLKNRVK--PFSENEARHFMHQIITGMLYLHS-HGILHRDLTLSNLLLTRNMNIKIADFG 157 (278)
T ss_dssp ---SEEEEEEECCTTEEHHHHHHTCSS--CCCHHHHHHHHHHHHHHHHHHHH-TTEECSSCCGGGEEECTTCCEEECCCT
T ss_pred ---CeEEEEEecCCCCcHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEEcCCCCEEEEeec
Confidence 4899999999 479998876421 12344566779999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------ 248 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~------ 248 (778)
++......... .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||.......
T Consensus 158 ~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 225 (278)
T 3cok_A 158 LATQLKMPHEK------HYTLCGTPNYISPEIATR------SAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV 225 (278)
T ss_dssp TCEECC----------------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CC
T ss_pred ceeeccCCCCc------ceeccCCCCcCCcchhcC------CCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHh
Confidence 99876532110 112234568999999876 356779999999999999999999886432211
Q ss_pred ------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++.+||..||.+||++.++++|+
T Consensus 226 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~ 264 (278)
T 3cok_A 226 LADYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHP 264 (278)
T ss_dssp SSCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTST
T ss_pred hcccCCccccCHHHHHHHHHHcccCHhhCCCHHHHhcCc
Confidence 123566788999999999999999999999998
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-34 Score=308.54 Aligned_cols=240 Identities=19% Similarity=0.214 Sum_probs=190.8
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
+...+|++.+.||.|+ | +||+|+++.++..|+||++..... .....+.+.+|++.++.++||||++++++++.+
T Consensus 8 ~~~~~y~i~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~-- 83 (294)
T 4eqm_A 8 IINERYKIVDKLGGGGMS--TVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEED-- 83 (294)
T ss_dssp CEETTEEEEEEEEEETTE--EEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECS--
T ss_pred HhhccEEEEEEEccCCCE--EEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeC--
Confidence 4556899999999998 8 999999999999999999976433 335567889999999999999999999999864
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
..+|+||||+ ++|.+++...+. .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+
T Consensus 84 ------~~~~lv~e~~~g~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~-~~i~H~Dlkp~Nil~~~~~~~kl~ 153 (294)
T 4eqm_A 84 ------DCYYLVMEYIEGPTLSEYIESHGP---LSVDTAINFTNQILDGIKHAHD-MRIVHRDIKPQNILIDSNKTLKIF 153 (294)
T ss_dssp ------SEEEEEEECCCSCBHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEECTTSCEEEC
T ss_pred ------CeEEEEEeCCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCCCEEEE
Confidence 4899999999 489999987653 2334456679999999999996 899999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh----
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---- 247 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~---- 247 (778)
|||++......... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 154 Dfg~~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~ 222 (294)
T 4eqm_A 154 DFGIAKALSETSLT-----QTNHVLGTVQYFSPEQAKG------EATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAI 222 (294)
T ss_dssp CCSSSTTC------------------CCSSCCHHHHHT------CCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHH
T ss_pred eCCCcccccccccc-----ccCccccCccccCHhHhcC------CCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence 99999876542111 1112345669999999876 35678999999999999999999998643210
Q ss_pred -------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 -------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 -------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+|..+.+++.+||..||.+||+..+.+.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~ 268 (294)
T 4eqm_A 223 KHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKD 268 (294)
T ss_dssp HHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHH
T ss_pred HHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHH
Confidence 124578889999999999999999954444433
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-35 Score=330.27 Aligned_cols=243 Identities=14% Similarity=0.137 Sum_probs=194.5
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
...+|++.+.||.|+ | +||+|+++.+++.||||++.+.... ....+.+.+|+.+|+.++||||+++++++.++
T Consensus 67 ~~~~y~~~~~LG~G~fG--~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~--- 141 (410)
T 3v8s_A 67 KAEDYEVVKVIGRGAFG--EVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD--- 141 (410)
T ss_dssp CGGGEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS---
T ss_pred CccccEEEEEEEcCCCE--EEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC---
Confidence 345799999999998 8 9999999999999999999752111 11223477899999999999999999999874
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
.++||||||| ++|.++++.... ....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|
T Consensus 142 -----~~~~lV~E~~~gg~L~~~l~~~~~----~e~~~~~~~~qi~~aL~~LH~-~givHrDLKp~NILl~~~g~ikL~D 211 (410)
T 3v8s_A 142 -----RYLYMVMEYMPGGDLVNLMSNYDV----PEKWARFYTAEVVLALDAIHS-MGFIHRDVKPDNMLLDKSGHLKLAD 211 (410)
T ss_dssp -----SEEEEEECCCTTEEHHHHHHHCCC----CHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECTTSCEEECC
T ss_pred -----CEEEEEEeCCCCCcHHHHHHcCCC----CHHHHHHHHHHHHHHHHHHHH-CCeEeccCCHHHeeECCCCCEEEec
Confidence 4899999999 479999876542 344566779999999999996 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh----c
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----N 248 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~----~ 248 (778)
||++........ .......++..|+|||++.+... ...++.++|+|||||++|||++|.+||...... .
T Consensus 212 FG~a~~~~~~~~-----~~~~~~~gt~~Y~APE~l~~~~~--~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~ 284 (410)
T 3v8s_A 212 FGTCMKMNKEGM-----VRCDTAVGTPDYISPEVLKSQGG--DGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSK 284 (410)
T ss_dssp CTTCEECCTTSE-----EECCSCCSCGGGCCHHHHHTTTT--TCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH
T ss_pred cceeEeeccCCc-----ccccCCcCCccccCHHHhhccCC--CcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHH
Confidence 999987754321 11223355669999999875210 011567999999999999999999998643211 0
Q ss_pred ------------cCCCCcchHHHHHHHhccCCCC--CCChHHHHhcc
Q 004025 249 ------------TASIPKSLLPDYQRLLSSMPSR--RLNSSKLIENS 281 (778)
Q Consensus 249 ------------~~~iP~~L~~~i~~lL~~dP~~--Rps~~~lL~~~ 281 (778)
...++..+.+++++||..+|.+ |+++.++++|+
T Consensus 285 i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp 331 (410)
T 3v8s_A 285 IMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 331 (410)
T ss_dssp HHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSG
T ss_pred HHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCc
Confidence 1246778999999999988988 99999999998
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-35 Score=327.66 Aligned_cols=249 Identities=16% Similarity=0.153 Sum_probs=188.1
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHH---HHHhcCCCCCeeeEe-------
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGV---KRLRTVRHPNILAFL------- 85 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev---~~Lk~LrHPnIlk~~------- 85 (778)
...|++.+.||.|+ | +||+|+++.+|+.|+||++..... .....+.+++|+ +.|+.++||||++++
T Consensus 72 ~~~y~~~~~lG~G~~g--~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~ 149 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPY--AYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPF 149 (377)
T ss_dssp CEEEEEEEEEEEETTE--EEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCS
T ss_pred CceEEEcceeecCCCE--EEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhh
Confidence 45799999999998 8 999999999999999999986432 234567789999 556666899999998
Q ss_pred eeeEeccc--------ccCCccc---EEEEEecCC-cChHHHHHHhCcCCCc---c-hHHHHHHHHHHHHHHHHHHcCCC
Q 004025 86 HSTEVENI--------DATSTKI---TIYIVTEPV-MPLSEKIKELGLEGSQ---R-DEYYAWGLNQIAKAVSFLNNDCK 149 (778)
Q Consensus 86 d~~e~e~~--------~g~~~~~---~lyIVtE~v-~~L~~~L~~~~~~~~~---~-~~~i~~gl~QI~~aL~fLH~~~~ 149 (778)
++++.++. ++ ... ..||||||+ ++|.+++......... . ...+..++.||+.||.|||+ .+
T Consensus 150 ~~~~~~~~~~~~~~~~~~--~~~~i~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ 226 (377)
T 3byv_A 150 DLVKDPQKKKMIRVRLDE--RDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH-YG 226 (377)
T ss_dssp EEEECTTSCSEEEC--------CEEESEEEEEECCSEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH-TT
T ss_pred hhhhccCCccccccccCC--CceEEEEEEEEEeccCCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh-CC
Confidence 66654321 00 000 389999999 6799999875432210 0 13344569999999999996 89
Q ss_pred ccccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCcccccccc-----ccccCCCCCcchh
Q 004025 150 LVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDW-----TAVRKSPPWSIDS 224 (778)
Q Consensus 150 ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~-----~~~~~~~~~~~Di 224 (778)
|+||||||+||+++.+|.+||+|||++...... .....+ ..|+|||++.+.- ......++.++|+
T Consensus 227 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~---------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Dv 296 (377)
T 3byv_A 227 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAR---------VVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDA 296 (377)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTCE---------EECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHH
T ss_pred eecCCCCHHHEEEcCCCCEEEEechhheecCCc---------ccCCCC-cCccChhhhcccccccccccccccCChhhhH
Confidence 999999999999999999999999999864331 112233 7899999987630 0000146789999
Q ss_pred HHHHHHHHHHHhCCCCCChhhh--------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 225 WGLGCLIYELFSGMRLSKTEEL--------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 225 wSLG~liyel~tg~~p~~~~~l--------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
|||||++|||++|..||..... .....+|..+.+++.+||..||.+||++.++++|+
T Consensus 297 wSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp 361 (377)
T 3byv_A 297 WALGLVIYWIWCADLPITKDAALGGSEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETP 361 (377)
T ss_dssp HHHHHHHHHHHHSSCCC------CCSGGGGSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSH
T ss_pred HHHHHHHHHHHHCCCCCcccccccchhhhhhhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhCh
Confidence 9999999999999999865322 22357888999999999999999999999999998
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-35 Score=320.66 Aligned_cols=240 Identities=18% Similarity=0.216 Sum_probs=194.6
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVEN 92 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~ 92 (778)
+...+|++.+.||.|+ | +||.|+++.+|+.||||++.+... .....+.+.+|.++|+.+ +||+|+++++++++.
T Consensus 17 ~~~~~y~~~~~lG~G~fg--~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~- 93 (353)
T 2i0e_A 17 MKLTDFNFLMVLGKGSFG--KVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM- 93 (353)
T ss_dssp --CTTEEEEEEEEEETTE--EEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECS-
T ss_pred CchHHcEEEEEEeeCCCE--EEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcC-
Confidence 4456899999999998 8 999999999999999999986421 113356688999999988 799999999999874
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEE
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
..+||||||| ++|..++...+. .....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||
T Consensus 94 -------~~~~lv~E~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~-~givHrDlkp~NIll~~~g~vkL 162 (353)
T 2i0e_A 94 -------DRLYFVMEYVNGGDLMYHIQQVGR---FKEPHAVFYAAEIAIGLFFLQS-KGIIYRDLKLDNVMLDSEGHIKI 162 (353)
T ss_dssp -------SEEEEEEECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHH-TTCBCCCCCGGGEEECTTSCEEE
T ss_pred -------CEEEEEEeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCEEeccCCHHHEEEcCCCcEEE
Confidence 4899999999 589999987653 2344566779999999999996 89999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc--
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN-- 248 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~-- 248 (778)
+|||++........ ......++..|+|||++.+ ..++.++|+|||||++|||++|.+||.......
T Consensus 163 ~DFG~a~~~~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~ 230 (353)
T 2i0e_A 163 ADFGMCKENIWDGV------TTKTFCGTPDYIAPEIIAY------QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELF 230 (353)
T ss_dssp CCCTTCBCCCCTTC------CBCCCCSCGGGCCHHHHTT------CCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred EeCCcccccccCCc------ccccccCCccccChhhhcC------CCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHH
Confidence 99999986433211 1222345668999999876 357789999999999999999999986432111
Q ss_pred ----------cCCCCcchHHHHHHHhccCCCCCCC-----hHHHHhcc
Q 004025 249 ----------TASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENS 281 (778)
Q Consensus 249 ----------~~~iP~~L~~~i~~lL~~dP~~Rps-----~~~lL~~~ 281 (778)
...++..+.+++++||..||.+||+ +.++++|+
T Consensus 231 ~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~ 278 (353)
T 2i0e_A 231 QSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHA 278 (353)
T ss_dssp HHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSG
T ss_pred HHHHhCCCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCc
Confidence 1346677889999999999999995 58999998
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-35 Score=313.93 Aligned_cols=246 Identities=18% Similarity=0.230 Sum_probs=193.2
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
...+|++.+.||.|+ | +||+|+++.+++.|+||++...... ......+.+|+++++.++||||++++++++.+...
T Consensus 10 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 87 (311)
T 3ork_A 10 LSDRYELGEILGFGGMS--EVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPA 87 (311)
T ss_dssp ETTTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETT
T ss_pred ecCcEEEEEEEccCCCE--EEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCC
Confidence 346799999999998 8 9999999999999999999875433 34566789999999999999999999999875432
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
....||||||+ ++|.+++...+. .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 88 ----~~~~~lv~e~~~g~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nil~~~~~~~kl~D 159 (311)
T 3ork_A 88 ----GPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSHQ-NGIIHRDVKPANIMISATNAVKVMD 159 (311)
T ss_dssp ----EEEEEEEEECCCEEEHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEEETTSCEEECC
T ss_pred ----CcccEEEEecCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCCCcCCCCHHHEEEcCCCCEEEee
Confidence 23679999999 479999987643 2344456679999999999996 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh-----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----- 247 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~----- 247 (778)
||++..+....... .......++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 160 fg~a~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~ 230 (311)
T 3ork_A 160 FGIARAIADSGNSV---TQTAAVIGTAQYLSPEQARG------DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 230 (311)
T ss_dssp CSCC---------------------CCTTCCHHHHHT------CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred ccCccccccccccc---ccccccCcCcccCCHHHhcC------CCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence 99998765432111 11122345669999999876 35678999999999999999999998643211
Q ss_pred -----------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -----------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|..+..++.+||..||.+||+..+.+.+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~ 275 (311)
T 3ork_A 231 HVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRAD 275 (311)
T ss_dssp HHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHH
T ss_pred HhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHH
Confidence 1134788899999999999999999999999886
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-35 Score=307.23 Aligned_cols=237 Identities=18% Similarity=0.268 Sum_probs=192.0
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
.-.+|++.+.||.|+ | +||+|+++.++..|+||++....... .....+.+|+.+++.++||||++++++++..
T Consensus 7 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 81 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFG--NVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA--- 81 (279)
T ss_dssp CGGGEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS---
T ss_pred ecccEEEeeEEecCCCe--EEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecC---
Confidence 345799999999998 8 99999999999999999997532211 2355688999999999999999999999864
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 82 -----~~~~lv~e~~~~~~l~~~l~~~~~---~~~~~~~~~~~qi~~~l~~LH~-~~i~H~dlkp~Nili~~~~~~~l~D 152 (279)
T 3fdn_A 82 -----TRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCHS-KRVIHRDIKPENLLLGSAGELKIAD 152 (279)
T ss_dssp -----SEEEEEECCCTTEEHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHT-TTCEECCCCGGGEEECTTSCEEECS
T ss_pred -----CEEEEEEecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCEecccCChHhEEEcCCCCEEEEe
Confidence 4899999999 479998887643 2334456669999999999995 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN---- 248 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~---- 248 (778)
||++....... .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||.......
T Consensus 153 fg~~~~~~~~~--------~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~ 218 (279)
T 3fdn_A 153 FGWSVHAPSSR--------RTDLCGTLDYLPPEMIEG------RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 218 (279)
T ss_dssp CCEESCC----------------CCCCTTCCHHHHTT------CCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH
T ss_pred ccccccCCccc--------ccccCCCCCccCHhHhcc------CCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHH
Confidence 99986554321 112244568999999876 356779999999999999999999986432211
Q ss_pred --------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 --------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 --------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++.+||..+|.+||++.++++|+
T Consensus 219 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~ 259 (279)
T 3fdn_A 219 ISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP 259 (279)
T ss_dssp HHHTCCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCH
T ss_pred HHhCCCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 134667789999999999999999999999998
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-34 Score=314.67 Aligned_cols=236 Identities=16% Similarity=0.147 Sum_probs=192.5
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.|++.+.||.|+ | +||+|+++.+|+.|+||++...... ....+.+.+|+++|+.|+||||+++++++..+
T Consensus 55 ~y~~~~~lG~G~~g--~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~------ 126 (348)
T 1u5q_A 55 LFSDLREIGHGSFG--AVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE------ 126 (348)
T ss_dssp HEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET------
T ss_pred heeeeeEEccCCCE--EEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC------
Confidence 489999999998 8 9999999999999999999865433 24456788999999999999999999999874
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+||||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 127 --~~~~lv~e~~~g~l~~~l~~~~~--~l~~~~~~~i~~qi~~aL~~LH~-~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 201 (348)
T 1u5q_A 127 --HTAWLVMEYCLGSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHS-HNMIHRDVKAGNILLSEPGLVKLGDFGSA 201 (348)
T ss_dssp --TEEEEEEECCSEEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHH-TTCBCCCCSGGGEEEETTTEEEECCCTTC
T ss_pred --CeEEEEEecCCCCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh-CCeeeCCCCHHHEEECCCCCEEEeeccCc
Confidence 3899999999 678888865432 12344566779999999999996 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----h-----
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R----- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~----- 247 (778)
....... ...++..|+|||++.+.- ...++.++|+|||||++|||++|.+||..... .
T Consensus 202 ~~~~~~~----------~~~gt~~y~aPE~~~~~~---~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~ 268 (348)
T 1u5q_A 202 SIMAPAN----------SFVGTPYWMAPEVILAMD---EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN 268 (348)
T ss_dssp BSSSSBC----------CCCSCGGGCCHHHHHTTS---SCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS
T ss_pred eecCCCC----------cccCCcceeCHhhhcccc---CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc
Confidence 7764321 123456899999985310 13567799999999999999999988753211 0
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -----~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|..+.+++.+||..+|.+||++.++++|+
T Consensus 269 ~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~ 307 (348)
T 1u5q_A 269 ESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 307 (348)
T ss_dssp CCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCH
T ss_pred CCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 0134677789999999999999999999999998
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-35 Score=317.07 Aligned_cols=237 Identities=19% Similarity=0.235 Sum_probs=194.0
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch------hHHHHHHHHHHHHhcCCCCCeeeEeeeeEec
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD------GHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~------~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e 91 (778)
.+|++.+.||.|+ | +||+|+++.+|+.|+||++......+ .....+.+|+++|+.++||||++++++++.+
T Consensus 24 ~~y~~~~~lG~G~~g--~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 24 QKYSTMSPLGSGAFG--FVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHEEEEEECSSSSSC--SEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cceEEEeEEEecCCE--EEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 4799999999998 8 89999999999999999998754221 1334567899999999999999999999864
Q ss_pred ccccCCcccEEEEEecCC--c-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcE
Q 004025 92 NIDATSTKITIYIVTEPV--M-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDW 168 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~ 168 (778)
..+|+||||+ + +|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+
T Consensus 102 --------~~~~lv~e~~~~g~~l~~~~~~~~~---l~~~~~~~i~~qi~~~L~~LH~-~~ivH~Dlkp~NIll~~~~~~ 169 (335)
T 3dls_A 102 --------GFFQLVMEKHGSGLDLFAFIDRHPR---LDEPLASYIFRQLVSAVGYLRL-KDIIHRDIKDENIVIAEDFTI 169 (335)
T ss_dssp --------SEEEEEEECCTTSCBHHHHHHTCCC---CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECTTSCE
T ss_pred --------CEEEEEEEeCCCCccHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeEEeccCHHHEEEcCCCcE
Confidence 4899999998 3 78888876542 2344566679999999999996 899999999999999999999
Q ss_pred EEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh--
Q 004025 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-- 246 (778)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l-- 246 (778)
||+|||++........ .....++..|+|||++.+. ...+.++|+|||||++|+|++|..||....-
T Consensus 170 kL~Dfg~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~~-----~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~ 237 (335)
T 3dls_A 170 KLIDFGSAAYLERGKL-------FYTFCGTIEYCAPEVLMGN-----PYRGPELEMWSLGVTLYTLVFEENPFCELEETV 237 (335)
T ss_dssp EECCCTTCEECCTTCC-------BCEECSCGGGCCHHHHTTC-----CBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGT
T ss_pred EEeecccceECCCCCc-------eeccCCCccccChhhhcCC-----CCCCCcccchhHHHHHHHHHhCCCchhhHHHHH
Confidence 9999999987754211 1223455689999998763 2236789999999999999999998864321
Q ss_pred ----hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 ----RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ----~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....++..+.+++.+||..||.+||++.++++|+
T Consensus 238 ~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp 276 (335)
T 3dls_A 238 EAAIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDP 276 (335)
T ss_dssp TTCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCT
T ss_pred hhccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 11234677899999999999999999999999998
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-35 Score=333.38 Aligned_cols=240 Identities=18% Similarity=0.258 Sum_probs=196.6
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
+...+|.+++.||.|+ | +||.|+++.+|+.|+||++.+..... .....+.+|+++|+.++||||+++++++++.
T Consensus 13 ~~~~~Y~l~~~LG~G~fg--~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~-- 88 (476)
T 2y94_A 13 VKIGHYILGDTLGVGTFG--KVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTP-- 88 (476)
T ss_dssp CEETTEEEEEEEECCSSS--CEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECS--
T ss_pred ceecCEEEEEEEeeCCCe--EEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC--
Confidence 3456899999999998 8 89999999999999999997532211 2356789999999999999999999999874
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
..+||||||| ++|.+++...+. .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+
T Consensus 89 ------~~~~lv~E~~~gg~L~~~l~~~~~---l~~~~~~~i~~qi~~aL~~LH~-~givHrDLkp~NIll~~~~~vkL~ 158 (476)
T 2y94_A 89 ------SDIFMVMEYVSGGELFDYICKNGR---LDEKESRRLFQQILSGVDYCHR-HMVVHRDLKPENVLLDAHMNAKIA 158 (476)
T ss_dssp ------SEEEEEEECCSSEEHHHHTTSSSS---CCHHHHHHHHHHHHHHHHHHHT-TTEECSCCSGGGEEECTTCCEEEC
T ss_pred ------CEEEEEEeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCCCcccccHHHEEEecCCCeEEE
Confidence 4899999999 479998865432 2344566779999999999995 899999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc---
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN--- 248 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~--- 248 (778)
|||++........ .....++..|+|||++.+. ...+.++|+|||||++|+|++|..||.......
T Consensus 159 DFG~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~~-----~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~ 226 (476)
T 2y94_A 159 DFGLSNMMSDGEF-------LRTSCGSPNYAAPEVISGR-----LYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFK 226 (476)
T ss_dssp CCSSCEECCTTCC-------BCCCCSCSTTCCHHHHTTC-----CBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHH
T ss_pred eccchhhcccccc-------ccccCCCcCeEChhhccCC-----CCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHH
Confidence 9999987654211 1123456699999998863 233578999999999999999999986542211
Q ss_pred ---------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ---------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ---------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++++||..||.+||++.++++|+
T Consensus 227 ~i~~~~~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp 268 (476)
T 2y94_A 227 KICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHE 268 (476)
T ss_dssp HHHTTCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCH
T ss_pred HHhcCCcCCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhCH
Confidence 123567789999999999999999999999998
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-34 Score=330.44 Aligned_cols=241 Identities=19% Similarity=0.282 Sum_probs=195.8
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..|++.+.||.|+ | +||+|+++.+|+.|+||++.+..........+.+|+++|++|+||||++++++++..
T Consensus 22 ~~y~~~~~lG~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~------ 93 (486)
T 3mwu_A 22 ERYNIVCMLGKGSFG--EVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDS------ 93 (486)
T ss_dssp HHEEEEEEEECCSSS--EEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECS------
T ss_pred cceEEeEEEeecCCE--EEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcC------
Confidence 4799999999999 8 999999999999999999975433233456788999999999999999999999864
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEc---CCCcEEEEe
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT---QTLDWKLHA 172 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~---~~g~~KL~d 172 (778)
..+||||||| ++|.+++..... .....+..++.||+.||.|||+ .+|+||||||+||+++ .++.+||+|
T Consensus 94 --~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~i~~qi~~al~~lH~-~~ivH~Dlkp~Nil~~~~~~~~~~kl~D 167 (486)
T 3mwu_A 94 --SSFYIVGELYTGGELFDEIIKRKR---FSEHDAARIIKQVFSGITYMHK-HNIVHRDLKPENILLESKEKDCDIKIID 167 (486)
T ss_dssp --SEEEEEECCCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEESSSSTTCCEEECS
T ss_pred --CEEEEEEEcCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeEeccCchHHEEEecCCCCCCEEEEE
Confidence 4899999999 478888876543 2344566779999999999996 8999999999999995 456799999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh-----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----- 247 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~----- 247 (778)
||++..+..... .....++..|+|||++.+ .++.++|+|||||++|+|++|.+||......
T Consensus 168 fg~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~-------~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~ 233 (486)
T 3mwu_A 168 FGLSTCFQQNTK-------MKDRIGTAYYIAPEVLRG-------TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKR 233 (486)
T ss_dssp CSCTTTBCCC-----------CCTTGGGGCCGGGGGS-------CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred CCcCeECCCCCc-------cCCCcCCCCCCCHHHhCC-------CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 999987654211 112245568999999875 3667999999999999999999998543211
Q ss_pred -----------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcccCCccccccc
Q 004025 248 -----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYF 291 (778)
Q Consensus 248 -----------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff 291 (778)
....++..+.+++++||..+|.+||++.++++|+ |+..+.
T Consensus 234 i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp----~~~~~~ 284 (486)
T 3mwu_A 234 VETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHP----WIQKYS 284 (486)
T ss_dssp HHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCH----HHHHTC
T ss_pred HHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCH----hhccCc
Confidence 1134677789999999999999999999999999 766544
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=307.87 Aligned_cols=244 Identities=15% Similarity=0.177 Sum_probs=196.0
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-------hhHHHHHHHHHHHHhcCC-CCCeeeEeee
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-------DGHLAAARNGVKRLRTVR-HPNILAFLHS 87 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-------~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~ 87 (778)
...+|++.+.||.|+ | +||+|+++.+|+.|+||++...... ....+.+.+|+++|++++ ||||++++++
T Consensus 15 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~ 92 (298)
T 1phk_A 15 FYENYEPKEILGRGVSS--VVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDT 92 (298)
T ss_dssp CTTTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred hhhccceeeeecCCCce--EEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeee
Confidence 456899999999998 7 9999999999999999999865321 133566889999999996 9999999999
Q ss_pred eEecccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC
Q 004025 88 TEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT 165 (778)
Q Consensus 88 ~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~ 165 (778)
++.+ ..+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||+|+||+++.+
T Consensus 93 ~~~~--------~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~Nil~~~~ 160 (298)
T 1phk_A 93 YETN--------TFFFLVFDLMKKGELFDYLTEKVT---LSEKETRKIMRALLEVICALHK-LNIVHRDLKPENILLDDD 160 (298)
T ss_dssp EECS--------SEEEEEEECCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECTT
T ss_pred eccC--------CeEEEEEeccCCCcHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCcceEEEcCC
Confidence 9863 4899999999 479999987542 2344466679999999999996 899999999999999999
Q ss_pred CcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh
Q 004025 166 LDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE 245 (778)
Q Consensus 166 g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~ 245 (778)
|.+||+|||++........ .....++..|+|||++.+........++.++|+|||||++|+|++|..||....
T Consensus 161 ~~~kl~dfg~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 233 (298)
T 1phk_A 161 MNIKLTDFGFSCQLDPGEK-------LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK 233 (298)
T ss_dssp CCEEECCCTTCEECCTTCC-------BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CcEEEecccchhhcCCCcc-------cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCcc
Confidence 9999999999987654221 111234558999999864322112356789999999999999999998875321
Q ss_pred hh----------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 246 LR----------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 246 l~----------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. ....+|..+.+++.+||..||.+||++.++++|+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~ 285 (298)
T 1phk_A 234 QMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHP 285 (298)
T ss_dssp HHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSG
T ss_pred HHHHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhCh
Confidence 10 0124677799999999999999999999999998
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-35 Score=331.67 Aligned_cols=238 Identities=15% Similarity=0.194 Sum_probs=185.5
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
.+|++.+.||.|+ | +||+|+++.+|+.||||++.+... .......+.+|+++|+.++||||++++++++..
T Consensus 148 ~~y~~~~~lG~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~----- 220 (446)
T 4ejn_A 148 NEFEYLKLLGKGTFG--KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTH----- 220 (446)
T ss_dssp GGEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEET-----
T ss_pred HHcEEeEEEeeCcCE--EEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeC-----
Confidence 4699999999998 8 999999999999999999975321 123345678899999999999999999999874
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+||||||+ ++|..++...... ....+..++.||+.||.|||+..+|+||||||+||+++.+|.+||+|||
T Consensus 221 ---~~~~lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG 294 (446)
T 4ejn_A 221 ---DRLCFVMEYANGGELFFHLSRERVF---SEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFG 294 (446)
T ss_dssp ---TEEEEEECCCSSCBHHHHHHHHSCC---CHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCC
T ss_pred ---CEEEEEEeeCCCCcHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCC
Confidence 3899999999 4799888776532 3444666799999999999954799999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh-------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------- 247 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------- 247 (778)
++........ ......++..|+|||++.+ ..++.++|+|||||++|||++|..||......
T Consensus 295 ~a~~~~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~ 362 (446)
T 4ejn_A 295 LCKEGIKDGA------TMKTFCGTPEYLAPEVLED------NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL 362 (446)
T ss_dssp CCCTTCC-----------CCSSSCGGGCCHHHHHT------SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred CceeccCCCc------ccccccCCccccCHhhcCC------CCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHH
Confidence 9876433211 1112345569999999876 46788999999999999999999988543211
Q ss_pred -c----cCCCCcchHHHHHHHhccCCCCCC-----ChHHHHhcc
Q 004025 248 -N----TASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENS 281 (778)
Q Consensus 248 -~----~~~iP~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~ 281 (778)
. ...++..+.+++.+||..||.+|| ++.++++|+
T Consensus 363 ~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp 406 (446)
T 4ejn_A 363 MEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHR 406 (446)
T ss_dssp HCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSG
T ss_pred hCCCCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCc
Confidence 1 134667789999999999999999 999999998
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-34 Score=305.50 Aligned_cols=242 Identities=16% Similarity=0.200 Sum_probs=192.7
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
..+|.+++.||.|+ | +||+|+++.+++.|+||++... .....+.+.+|+++|++|+||||+++++++..+
T Consensus 9 ~~~~~~~~~lG~G~~g--~V~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~----- 79 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFG--QAIKVTHRETGEVMVMKELIRF--DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKD----- 79 (310)
T ss_dssp GGGEEEEEEEECCSSE--EEEEEEETTTCCEEEEEEESCC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEET-----
T ss_pred hhHeeccceecCCCCE--EEEEEEECCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecC-----
Confidence 35799999999998 8 9999999999999999998643 344567889999999999999999999999874
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+|+||||+ ++|.++++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 80 ---~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~i~~qi~~al~~lH~-~~ivH~dlkp~Nil~~~~~~~kl~Dfg 153 (310)
T 3s95_A 80 ---KRLNFITEYIKGGTLRGIIKSMDSQ--YPWSQRVSFAKDIASGMAYLHS-MNIIHRDLNSHNCLVRENKNVVVADFG 153 (310)
T ss_dssp ---TEEEEEEECCTTCBHHHHHHHCCTT--SCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSTTSEEECTTSCEEECCCT
T ss_pred ---CeeEEEEEecCCCcHHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHh-CCccCCCCCcCeEEECCCCCEEEeecc
Confidence 4899999999 4899999874321 2334456669999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCC--------CccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh
Q 004025 175 VLSEFDGNNEAANG--------PMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL 246 (778)
Q Consensus 175 la~~~~~~~~~~~~--------~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l 246 (778)
++............ ....+...++..|+|||++.+ ..++.++|+|||||++|||++|..++.....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~~g~~~~~~~~~ 227 (310)
T 3s95_A 154 LARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMING------RSYDEKVDVFSFGIVLCEIIGRVNADPDYLP 227 (310)
T ss_dssp TCEECC--------------------CCCCSCGGGCCHHHHTT------CCCCTHHHHHHHHHHHHHHHHTCCSSTTTSC
T ss_pred cceecccccccccccccccccccccccccCCCcceeCHHHhcC------CCCCcHHHHHHHHHHHHHHhcCCCCCcchhh
Confidence 99877543221110 000112345568999999876 4677899999999999999999877643211
Q ss_pred ---------------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 247 ---------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 247 ---------------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
.....+|..+.+++.+||..||.+||++.++++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~ 276 (310)
T 3s95_A 228 RTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHW 276 (310)
T ss_dssp BCTTSSBCHHHHHHHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hHHHHhhhhhccccccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 0125688899999999999999999999988763
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=305.78 Aligned_cols=240 Identities=18% Similarity=0.244 Sum_probs=190.0
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
+...+|.+++.||.|+ | +||.|+++.+|+.|+||++...... ....+.+.+|++.++.++||||+++++++...
T Consensus 8 ~~~~~y~i~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-- 83 (276)
T 2h6d_A 8 VKIGHYVLGDTLGVGTFG--KVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTP-- 83 (276)
T ss_dssp CEETTEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS--
T ss_pred ceeccEEEEeeecCCCCe--EEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecC--
Confidence 4456899999999998 8 8999999999999999999753211 13356788999999999999999999999863
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
..+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+
T Consensus 84 ------~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~Nil~~~~~~~~l~ 153 (276)
T 2h6d_A 84 ------TDFFMVMEYVSGGELFDYICKHGR---VEEMEARRLFQQILSAVDYCHR-HMVVHRDLKPENVLLDAHMNAKIA 153 (276)
T ss_dssp ------SEEEEEEECCCSCBHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHH-HCSSCCCCCGGGEEECTTSCEEEC
T ss_pred ------CeEEEEEeccCCCcHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHH-CCCccCCCChhhEEECCCCCEEEe
Confidence 4899999999 489999987643 2344466779999999999996 899999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc---
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN--- 248 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~--- 248 (778)
|||++........ .....++..|+|||++.+. ...+.++|+|||||++|+|++|..||.......
T Consensus 154 dfg~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~ 221 (276)
T 2h6d_A 154 DFGLSNMMSDGEF-------LRTSCGSPNYAAPEVISGR-----LYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFK 221 (276)
T ss_dssp CCCGGGCCCC--------------------CCTGGGTTS-----CCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred ecccccccCCCcc-------eecccCCccccCHHHHcCC-----CCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHH
Confidence 9999987654211 1122345689999998763 223568999999999999999999886432111
Q ss_pred ---------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ---------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ---------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++.+||+.||.+||++.++++|+
T Consensus 222 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~ 263 (276)
T 2h6d_A 222 KIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHE 263 (276)
T ss_dssp HHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSH
T ss_pred HhhcCcccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhCh
Confidence 124567789999999999999999999999998
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=315.59 Aligned_cols=238 Identities=18% Similarity=0.261 Sum_probs=196.1
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
..+|.+++.||.|+ | +||+++++.+++.|++|++..... .....+.+.+|+.+++.++||||+++++++++.
T Consensus 40 ~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---- 113 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFA--KCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDN---- 113 (335)
T ss_dssp TEEEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS----
T ss_pred CCceEEEEEEeeCCCe--EEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC----
Confidence 45799999999998 8 999999999999999999986532 234567789999999999999999999999864
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..+||||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+||
T Consensus 114 ----~~~~lv~e~~~~~~L~~~~~~~~~---l~~~~~~~i~~qi~~aL~~LH~-~~ivH~dlkp~NIl~~~~~~~kl~Df 185 (335)
T 2owb_A 114 ----DFVFVVLELCRRRSLLELHKRRKA---LTEPEARYYLRQIVLGCQYLHR-NRVIHRDLKLGNLFLNEDLEVKIGDF 185 (335)
T ss_dssp ----SEEEEEECCCTTCBHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCCGGGEEECTTCCEEECCC
T ss_pred ----CeEEEEEecCCCCCHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHH-CCCEecCCCchhEEEcCCCCEEEeec
Confidence 4899999999 479888877542 2344566779999999999996 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------ 247 (778)
|++......... .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 186 g~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~ 253 (335)
T 2owb_A 186 GLATKVEYDGER------KKVLCGTPNYIAPEVLSK------KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI 253 (335)
T ss_dssp TTCEECCSTTCC------BCCCCSCCSSCCHHHHHT------SCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH
T ss_pred cCceecccCccc------ccccCCCccccCHHHhcc------CCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHH
Confidence 999877542211 112234568999999876 35678999999999999999999998643211
Q ss_pred --c----cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 --N----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 --~----~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ...++..+.+++++||..||.+||++.++++|+
T Consensus 254 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~ 293 (335)
T 2owb_A 254 KKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDE 293 (335)
T ss_dssp HHTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred hcCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCc
Confidence 1 134566788999999999999999999999998
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=319.65 Aligned_cols=247 Identities=13% Similarity=0.109 Sum_probs=179.5
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcC--CCCCeeeEe-------ee
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTV--RHPNILAFL-------HS 87 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~L--rHPnIlk~~-------d~ 87 (778)
..|++.+.||.|+ | +||+|+++.+|+.||||++...... ....+.+++|+++++.| +||||++++ +.
T Consensus 62 ~~y~~~~~lG~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~ 139 (371)
T 3q60_A 62 RKLKLVEPLRVGDRS--VVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDA 139 (371)
T ss_dssp EEEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEE
T ss_pred eeeeeeeeccCCCCE--EEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehh
Confidence 4599999999998 8 9999999999999999999976542 24566778885444444 699988866 44
Q ss_pred eEeccccc---------CCcccEEEEEecCC-cChHHHHHHhCcCCCcchH---HH-HHHHHHHHHHHHHHHcCCCcccc
Q 004025 88 TEVENIDA---------TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDE---YY-AWGLNQIAKAVSFLNNDCKLVHG 153 (778)
Q Consensus 88 ~e~e~~~g---------~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~---~i-~~gl~QI~~aL~fLH~~~~ivH~ 153 (778)
+..+...+ ......+||||||+ ++|.+++...+........ .+ .+++.||+.||.|||+ .+|+||
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~-~~ivHr 218 (371)
T 3q60_A 140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQS-KGLVHG 218 (371)
T ss_dssp EEETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHH-TTEEET
T ss_pred eecCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHH-CCCccC
Confidence 44322100 00014699999999 6899999875322111111 12 2335999999999996 899999
Q ss_pred ccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHH
Q 004025 154 NVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYE 233 (778)
Q Consensus 154 dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liye 233 (778)
||||+||+|+.+|.+||+|||+++..... .....++..|+|||++.+.. ..++.++|+|||||++||
T Consensus 219 Dikp~NIll~~~~~~kL~DFG~a~~~~~~---------~~~~~~t~~y~aPE~~~~~~----~~~~~~~DiwSlG~il~e 285 (371)
T 3q60_A 219 HFTPDNLFIMPDGRLMLGDVSALWKVGTR---------GPASSVPVTYAPREFLNAST----ATFTHALNAWQLGLSIYR 285 (371)
T ss_dssp TCSGGGEEECTTSCEEECCGGGEEETTCE---------EEGGGSCGGGCCHHHHTCSE----EECCHHHHHHHHHHHHHH
T ss_pred cCCHHHEEECCCCCEEEEecceeeecCCC---------ccCccCCcCCcChhhccCCC----CCcCccccHHHHHHHHHH
Confidence 99999999999999999999999876431 11234457899999987521 246789999999999999
Q ss_pred HHhCCCCCChhhh---------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 234 LFSGMRLSKTEEL---------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 234 l~tg~~p~~~~~l---------------------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
|++|..||..... .....+|..+.+++.+||..||.+||++.++++|+
T Consensus 286 lltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 354 (371)
T 3q60_A 286 VWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETP 354 (371)
T ss_dssp HHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSH
T ss_pred HHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCH
Confidence 9999998865411 01135678899999999999999999999999998
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-35 Score=313.80 Aligned_cols=248 Identities=14% Similarity=0.187 Sum_probs=193.8
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
....|++.+.||.|+ | +||+|+++.+|+.|+||++...... ...+.+.+|+++|+.++||||+++++++....
T Consensus 7 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--- 80 (319)
T 4euu_A 7 SNHLWLLSDILGQGATA--NVFRGRHKKTGDLFAIKVFNNISFL-RPVDVQMREFEVLKKLNHKNIVKLFAIEEETT--- 80 (319)
T ss_dssp SSEEEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEECGGGGG-SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTT---
T ss_pred CCCCEEEEEEecCCCCe--EEEEEEECCCCcEEEEEEecccccc-chHHHHHHHHHHHHhcCCCCcceEEEEeecCC---
Confidence 456799999999998 8 9999999999999999999754322 23566789999999999999999999998654
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEE----cCCCcEE
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV----TQTLDWK 169 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v----~~~g~~K 169 (778)
...+||||||+ ++|.+++.............+..++.||+.||.|||+ .+++||||||+||++ +.++.+|
T Consensus 81 ---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~-~~ivH~Dlkp~NIll~~~~~~~~~~k 156 (319)
T 4euu_A 81 ---TRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE-NGIVHRNIKPGNIMRVIGEDGQSVYK 156 (319)
T ss_dssp ---TCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEEEECTTSCEEEE
T ss_pred ---CceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHH-CCEecCCCCHHHEEEeccCCCCceEE
Confidence 34789999999 5799999876543323455567779999999999996 899999999999999 7888899
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCcccccccccc--ccCCCCCcchhHHHHHHHHHHHhCCCCCChhh--
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTA--VRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-- 245 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~--~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-- 245 (778)
|+|||++........ .....++..|+|||++...... ....++.++|+|||||++|||++|..||....
T Consensus 157 L~Dfg~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~ 229 (319)
T 4euu_A 157 LTDFGAARELEDDEQ-------FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP 229 (319)
T ss_dssp ECCCTTCEECCTTCC-------BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCG
T ss_pred EccCCCceecCCCCc-------eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcc
Confidence 999999987755321 1122345689999997631000 01356789999999999999999998874211
Q ss_pred ------hhcc-----------------------CC----------CCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 246 ------LRNT-----------------------AS----------IPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 246 ------l~~~-----------------------~~----------iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+..+ .. ++..+.+++++||..||.+||++.++++|+
T Consensus 230 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~ 304 (319)
T 4euu_A 230 RRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET 304 (319)
T ss_dssp GGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred chhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence 0000 01 123567788999999999999999999997
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=317.74 Aligned_cols=239 Identities=16% Similarity=0.184 Sum_probs=196.1
Q ss_pred CCCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 15 GVKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 15 ~~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
.+...+|++.+.||.|+ | +||+|+++.+|..|+||++.... .....+.+.+|+++|+.++||||+++++++..+
T Consensus 29 ~~~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-- 103 (360)
T 3eqc_A 29 ELKDDDFEKISELGAGNGG--VVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD-- 103 (360)
T ss_dssp CCCGGGEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEEECCC-CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEET--
T ss_pred ccccccceeeeeecCCCCe--EEEEEEECCCCcEEEEEEecccc-CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEEC--
Confidence 45567899999999998 8 99999999999999999998653 344567789999999999999999999999874
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
..+||||||+ ++|.+++..... .....+..++.||+.||.|||+.++++||||||+||+++.+|.+||+
T Consensus 104 ------~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~ 174 (360)
T 3eqc_A 104 ------GEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLC 174 (360)
T ss_dssp ------TEEEEEECCCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEEC
T ss_pred ------CEEEEEEECCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEE
Confidence 3899999999 489999987653 23444666799999999999963489999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc---
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN--- 248 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~--- 248 (778)
|||++....... .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||.......
T Consensus 175 Dfg~~~~~~~~~--------~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 240 (360)
T 3eqc_A 175 DFGVSGQLIDSM--------ANSFVGTRSYMSPERLQG------THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELEL 240 (360)
T ss_dssp CCCCCHHHHHHC------------CCCCTTCCHHHHTT------CCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHH
T ss_pred ECCCCccccccc--------ccCCCCCCCeECHHHHcC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 999987653211 112245568999999876 357789999999999999999998875321100
Q ss_pred -----------------------------------------------------cCCCCcchHHHHHHHhccCCCCCCChH
Q 004025 249 -----------------------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSS 275 (778)
Q Consensus 249 -----------------------------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~ 275 (778)
...++..+.+++++||..||.+||++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 320 (360)
T 3eqc_A 241 MFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLK 320 (360)
T ss_dssp HHC------------------------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHH
T ss_pred HhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHH
Confidence 012566788999999999999999999
Q ss_pred HHHhcc
Q 004025 276 KLIENS 281 (778)
Q Consensus 276 ~lL~~~ 281 (778)
++++|+
T Consensus 321 ell~hp 326 (360)
T 3eqc_A 321 QLMVHA 326 (360)
T ss_dssp HHHTSH
T ss_pred HHhhCh
Confidence 999998
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-34 Score=302.17 Aligned_cols=233 Identities=16% Similarity=0.226 Sum_probs=193.2
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..|++.+.||.|+ | +||+|+++.++..|++|++...... ..+.+.+|+++++.++||||++++++++..
T Consensus 9 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~a~k~~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------ 78 (277)
T 3f3z_A 9 QYYTLENTIGRGSWG--EVKIAVQKGTRIRRAAKKIPKYFVE--DVDRFKQEIEIMKSLDHPNIIRLYETFEDN------ 78 (277)
T ss_dssp HHEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEEGGGCS--CHHHHHHHHHHHHTCCCTTBCCEEEEEECS------
T ss_pred hhEEeeeEEeecCCE--EEEEEEeCCCCcEEEEEeehhhccc--hHHHHHHHHHHHHhCCCCCEeeEEEEEecC------
Confidence 4699999999998 8 9999999999999999999864332 356788999999999999999999999863
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEE---cCCCcEEEEe
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV---TQTLDWKLHA 172 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v---~~~g~~KL~d 172 (778)
..+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||++ +.++.+||+|
T Consensus 79 --~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~i~~~i~~~l~~lH~-~~i~H~dlkp~Nil~~~~~~~~~~~l~D 152 (277)
T 3f3z_A 79 --TDIYLVMELCTGGELFERVVHKRV---FRESDAARIMKDVLSAVAYCHK-LNVAHRDLKPENFLFLTDSPDSPLKLID 152 (277)
T ss_dssp --SEEEEEEECCCSCBHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEESSSSTTCCEEECC
T ss_pred --CeEEEEEeccCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCccCCCCCHHHEEEecCCCCCcEEEEe
Confidence 4899999999 479888877543 2344466779999999999996 899999999999999 7889999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh-----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----- 247 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~----- 247 (778)
||++........ .....++..|+|||++.+ .++.++|+|||||++|+|++|..||......
T Consensus 153 fg~~~~~~~~~~-------~~~~~~t~~y~aPE~~~~-------~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~ 218 (277)
T 3f3z_A 153 FGLAARFKPGKM-------MRTKVGTPYYVSPQVLEG-------LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLK 218 (277)
T ss_dssp CTTCEECCTTSC-------BCCCCSCTTTCCHHHHTT-------CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred cccceeccCccc-------hhccCCCCCccChHHhcc-------cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence 999987654321 112245568999999875 3567999999999999999999988542111
Q ss_pred -----------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -----------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|..+.+++.+||..||.+||++.++++|+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~ 263 (277)
T 3f3z_A 219 IREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHE 263 (277)
T ss_dssp HHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSH
T ss_pred HHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCH
Confidence 0125778899999999999999999999999998
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-34 Score=313.16 Aligned_cols=236 Identities=18% Similarity=0.218 Sum_probs=190.8
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-----CCCeeeEeeeeE
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-----HPNILAFLHSTE 89 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-----HPnIlk~~d~~e 89 (778)
+....|++.++||.|+ | +||+|+++.+++.|+||++... ......+..|+.+++.++ ||||+++++++.
T Consensus 32 ~~~~~y~~~~~lG~G~~g--~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~ 106 (360)
T 3llt_A 32 LLNNAFLVIRKMGDGTFG--RVLLCQHIDNKKYYAVKVVRNI---KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFM 106 (360)
T ss_dssp EETTTEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEECSC---HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEE
T ss_pred EecCEEEEEEEEcccCCe--EEEEEEECCCCeEEEEEEeccc---hhhhhhhHHHHHHHHHhcccCCCCCCeecccceee
Confidence 3456899999999998 8 9999999999999999999742 234556788999999997 999999999998
Q ss_pred ecccccCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC----
Q 004025 90 VENIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ---- 164 (778)
Q Consensus 90 ~e~~~g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~---- 164 (778)
.. ..+||||||+ ++|.+++....... .....+..++.||+.||.|||+ .+|+||||||+||+++.
T Consensus 107 ~~--------~~~~lv~e~~~~~L~~~~~~~~~~~-~~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~~~ 176 (360)
T 3llt_A 107 YY--------DHMCLIFEPLGPSLYEIITRNNYNG-FHIEDIKLYCIEILKALNYLRK-MSLTHTDLKPENILLDDPYFE 176 (360)
T ss_dssp ET--------TEEEEEECCCCCBHHHHHHHTTTCC-CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEESCTTCC
T ss_pred EC--------CeeEEEEcCCCCCHHHHHHhcCCCC-CCHHHHHHHHHHHHHHHHHHHH-CCeeeCCCCcccEEEcccccc
Confidence 74 3899999999 57999998765332 2344466779999999999996 99999999999999975
Q ss_pred ---------------------CCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcch
Q 004025 165 ---------------------TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSID 223 (778)
Q Consensus 165 ---------------------~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~D 223 (778)
++.+||+|||++....... ....++..|+|||++.+ ..++.++|
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~---------~~~~gt~~y~aPE~~~~------~~~~~~~D 241 (360)
T 3llt_A 177 KSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH---------GSIINTRQYRAPEVILN------LGWDVSSD 241 (360)
T ss_dssp EEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC---------CSCCSCGGGCCHHHHTT------CCCCTTHH
T ss_pred ccccchhcccccccccccccCCCCEEEEeccCceecCCCC---------cCccCcccccCcHHHcC------CCCCCccc
Confidence 8899999999998654321 11234568999999886 35788999
Q ss_pred hHHHHHHHHHHHhCCCCCChhhhh--------ccCCCC------------------------------------------
Q 004025 224 SWGLGCLIYELFSGMRLSKTEELR--------NTASIP------------------------------------------ 253 (778)
Q Consensus 224 iwSLG~liyel~tg~~p~~~~~l~--------~~~~iP------------------------------------------ 253 (778)
+|||||++|+|++|..||...... ....+|
T Consensus 242 iwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 321 (360)
T 3llt_A 242 MWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCL 321 (360)
T ss_dssp HHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCC
T ss_pred hHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcc
Confidence 999999999999999988532110 001111
Q ss_pred --------cchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 254 --------KSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 254 --------~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
..+.+++.+||..||.+||++.++|+|+
T Consensus 322 ~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp 357 (360)
T 3llt_A 322 PLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHK 357 (360)
T ss_dssp CHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSG
T ss_pred cccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCc
Confidence 3456899999999999999999999998
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=307.36 Aligned_cols=247 Identities=16% Similarity=0.098 Sum_probs=184.1
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
+...+|++.+.||.|+ | +||+|+++.+|+.|+||++..........+.+..+...++.++||||++++++++.+
T Consensus 4 i~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~--- 78 (290)
T 3fme_A 4 VKADDLEPIMELGRGAYG--VVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFRE--- 78 (290)
T ss_dssp CCGGGEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECS---
T ss_pred ccHHhhhhHHhcCCCCCe--EEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeecc---
Confidence 3456799999999998 8 999999999999999999986544444455566666778999999999999999864
Q ss_pred cCCcccEEEEEecCC-cChHHHHHHhCc-CCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV-MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v-~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+||||||+ ++|.+++..... ........+..++.||+.||.|||+.++++||||||+||+++.+|.+||+|
T Consensus 79 -----~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~D 153 (290)
T 3fme_A 79 -----GDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCD 153 (290)
T ss_dssp -----SSEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCC
T ss_pred -----CCEEEEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEee
Confidence 3799999999 578777765321 122334456677999999999999733999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh--h---hh
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE--E---LR 247 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~--~---l~ 247 (778)
||++........ .....++..|+|||++..... ...++.++|+|||||++|+|++|..||... . +.
T Consensus 154 fg~~~~~~~~~~-------~~~~~~t~~y~aPE~~~~~~~--~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~ 224 (290)
T 3fme_A 154 FGISGYLVDDVA-------KDIDAGCKPYMAPERINPELN--QKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLK 224 (290)
T ss_dssp C----------------------CCCCCCSCHHHHSCCTT--C--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHH
T ss_pred cCCccccccccc-------ccccCCCccccChhhcChhhc--CcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHH
Confidence 999987654211 111235568999999742110 135678999999999999999999988531 1 11
Q ss_pred c----------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 N----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ~----------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ...+|..+.+++.+||..||.+||++.++++|+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp 268 (290)
T 3fme_A 225 QVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHP 268 (290)
T ss_dssp HHHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSH
T ss_pred HHhccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhCc
Confidence 0 135677899999999999999999999999998
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-34 Score=328.65 Aligned_cols=234 Identities=18% Similarity=0.199 Sum_probs=189.5
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
.|++.+.||.|+ | +||+|+++.++..|+||++.+..........+.+|+++|+.|+||||++++++++..
T Consensus 38 ~y~~~~~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~------- 108 (494)
T 3lij_A 38 MYQRVKKLGSGAYG--EVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDK------- 108 (494)
T ss_dssp HEEEEEEEECC-----EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECS-------
T ss_pred CeEEeeEEecCCCE--EEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC-------
Confidence 699999999998 8 999999999999999999987644333456788999999999999999999999863
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC---CcEEEEec
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT---LDWKLHAF 173 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~---g~~KL~dF 173 (778)
..+||||||| ++|.+++...... ....+..++.||+.||.|||+ .+++||||||+||+++.. +.+||+||
T Consensus 109 -~~~~lv~e~~~~g~L~~~~~~~~~~---~~~~~~~i~~qi~~~l~~lH~-~~ivH~Dlkp~Nil~~~~~~~~~~kl~Df 183 (494)
T 3lij_A 109 -RNYYLVMECYKGGELFDEIIHRMKF---NEVDAAVIIKQVLSGVTYLHK-HNIVHRDLKPENLLLESKEKDALIKIVDF 183 (494)
T ss_dssp -SEEEEEEECCCSCBHHHHHHHHSSC---CHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEESCSSTTCCEEECCC
T ss_pred -CEEEEEEecCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCceeccCChhhEEEeCCCCCCcEEEEEC
Confidence 4899999999 4788888765432 234456679999999999996 899999999999999764 45999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------ 247 (778)
|++........ .....++..|+|||++.+ .++.++|+|||||++|+|++|.+||......
T Consensus 184 G~a~~~~~~~~-------~~~~~gt~~y~aPE~l~~-------~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i 249 (494)
T 3lij_A 184 GLSAVFENQKK-------MKERLGTAYYIAPEVLRK-------KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKV 249 (494)
T ss_dssp TTCEECBTTBC-------BCCCCSCTTTCCHHHHTT-------CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred CCCeECCCCcc-------ccccCCCcCeeCHHHHcc-------cCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 99987754321 122345668999999864 4667999999999999999999998643211
Q ss_pred ----------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ----------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++++||..+|.+||++.++++|+
T Consensus 250 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp 293 (494)
T 3lij_A 250 EKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHP 293 (494)
T ss_dssp HHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCH
T ss_pred HhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCc
Confidence 1135677899999999999999999999999998
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-34 Score=313.44 Aligned_cols=248 Identities=18% Similarity=0.284 Sum_probs=193.9
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
..+|++.+.||.|+ | +||+|+++.+|+.|+||++... ........+.+|+++|+.++||||+++++++..+...
T Consensus 10 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-- 84 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYG--VVCSATHKPTGEIVAIKKIEPF-DKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFE-- 84 (353)
T ss_dssp CTTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEECCC-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCST--
T ss_pred ccceEEeeEEcCCCCe--EEEEEEECCCCcEEEEEeeccc-ccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccC--
Confidence 45799999999998 8 9999999999999999999653 3334456788999999999999999999988653211
Q ss_pred CcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 97 ~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
....+|+||||+ ++|.+++.... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 85 -~~~~~~lv~e~~~~~L~~~~~~~~----~~~~~~~~~~~qi~~~L~~LH~-~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (353)
T 2b9h_A 85 -NFNEVYIIQELMQTDLHRVISTQM----LSDDHIQYFIYQTLRAVKVLHG-SNVIHRDLKPSNLLINSNCDLKVCDFGL 158 (353)
T ss_dssp -TCCCEEEEECCCSEEHHHHHHHCC----CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred -ccceEEEEEeccCccHHHHHhhcC----CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEEcCCCcEEEEeccc
Confidence 024799999999 67988887643 2344566779999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCc----cccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh----
Q 004025 176 LSEFDGNNEAANGPM----LQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---- 247 (778)
Q Consensus 176 a~~~~~~~~~~~~~~----~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~---- 247 (778)
+.............. ......++..|+|||++.++ ..++.++|+|||||++|+|++|.+||......
T Consensus 159 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 233 (353)
T 2b9h_A 159 ARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTS-----AKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLL 233 (353)
T ss_dssp CEECC----------------CCCCCCGGGCCHHHHHSC-----CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred ccccccccccccCccccccchhhccccccccCCeeeccC-----CCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHH
Confidence 987754321111000 01122445589999987643 35678999999999999999999988543210
Q ss_pred ----------------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ----------------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ----------------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|..+.+++++||..||.+||++.++++|+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 307 (353)
T 2b9h_A 234 LIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHP 307 (353)
T ss_dssp HHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred HHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCc
Confidence 0125677788999999999999999999999998
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=303.50 Aligned_cols=237 Identities=14% Similarity=0.200 Sum_probs=189.3
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
.....|++.+.||.|+ | +||+|+++.+|+.|+||++..... .+.+.+|+++++.++||||+++++++..+
T Consensus 26 ~~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 96 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYG--SVYKAIHKETGQIVAIKQVPVESD----LQEIIKEISIMQQCDSPHVVKYYGSYFKN--- 96 (314)
T ss_dssp ----CEEEEEECC----C--EEEEEEETTTCCEEEEEEEETTSC----CHHHHHHHHHHHTCCCTTBCCEEEEEEET---
T ss_pred cchhhhhhheeeccCCCe--EEEEEEECCCCCEEEEEecCchHH----HHHHHHHHHHHHhCCCCCCccEEEEEEeC---
Confidence 3456799999999998 8 999999999999999999986432 34578999999999999999999999874
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+||||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 97 -----~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~-~~i~H~dl~p~Nil~~~~~~~kl~d 168 (314)
T 3com_A 97 -----TDLWIVMEYCGAGSVSDIIRLRNK--TLTEDEIATILQSTLKGLEYLHF-MRKIHRDIKAGNILLNTEGHAKLAD 168 (314)
T ss_dssp -----TEEEEEEECCTTEEHHHHHHHHTC--CCCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECTTCCEEECC
T ss_pred -----CEEEEEeecCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHh-CCCcCCCcCHHHEEECCCCCEEEee
Confidence 3899999999 379999875432 12344567779999999999996 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh-----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----- 247 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~----- 247 (778)
||++......... .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 169 fg~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~ 236 (314)
T 3com_A 169 FGVAGQLTDTMAK------RNTVIGTPFWMAPEVIQE------IGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFM 236 (314)
T ss_dssp CTTCEECBTTBSC------BCCCCSCGGGCCHHHHSS------SCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH
T ss_pred cccchhhhhhccc------cCccCCCCCccChhhcCC------CCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence 9999876542111 112234558999999876 35678999999999999999999888542110
Q ss_pred ----------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ----------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|..+.+++.+||..||.+||++.++++|+
T Consensus 237 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~ 280 (314)
T 3com_A 237 IPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHP 280 (314)
T ss_dssp HHHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSH
T ss_pred HhcCCCcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhCH
Confidence 0123567789999999999999999999999998
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-34 Score=316.67 Aligned_cols=239 Identities=17% Similarity=0.242 Sum_probs=190.9
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..|.+.+.||.|+ | +||+|+++.+|+.|+||++......+.....+.+|+.+++.++||||+++++++...... .
T Consensus 42 ~~y~~~~~lG~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--~ 117 (371)
T 4exu_A 42 KTYVSPTHVGSGAYG--SVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSL--R 117 (371)
T ss_dssp TTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSS--T
T ss_pred ccEEEEeEEecCCCe--EEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCc--c
Confidence 4799999999998 8 999999999999999999987665666677889999999999999999999999864311 0
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
....+|+||||+ ++|..++... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 118 ~~~~~~lv~e~~~~~l~~~~~~~-----~~~~~~~~i~~qi~~aL~~LH~-~~ivH~Dikp~NIll~~~~~~kL~Dfg~a 191 (371)
T 4exu_A 118 NFYDFYLVMPFMQTDLQKIMGME-----FSEEKIQYLVYQMLKGLKYIHS-AGVVHRDLKPGNLAVNEDCELKILDFGLA 191 (371)
T ss_dssp TCCCCEEEEECCCEEHHHHTTSC-----CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEECTTCCEEECSTTCC
T ss_pred cceeEEEEEccccccHHHHhhcC-----CCHHHHHHHHHHHHHHHHHHHH-CCCcCCCcCHHHeEECCCCCEEEEecCcc
Confidence 012359999999 5677665321 2345567779999999999996 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----h-----
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R----- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~----- 247 (778)
....... ....++..|+|||++.+. ..++.++|+|||||++|+|++|..||..... .
T Consensus 192 ~~~~~~~---------~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~ 257 (371)
T 4exu_A 192 RHADAEM---------TGYVVTRWYRAPEVILSW-----MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKV 257 (371)
T ss_dssp -----------------CTTCCCTTSCHHHHSCC-----SCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred cccccCc---------CCcccCccccCHHHhcCC-----CCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence 8664321 122446689999998763 3577899999999999999999999864210 0
Q ss_pred ----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ----------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++++||..||.+||++.++++|+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 325 (371)
T 4exu_A 258 TGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHP 325 (371)
T ss_dssp HCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSG
T ss_pred hCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCc
Confidence 0124577889999999999999999999999998
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-34 Score=320.35 Aligned_cols=241 Identities=17% Similarity=0.242 Sum_probs=178.5
Q ss_pred Ccee-ccCCCCCC-CceEEEEeEEC--CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 20 PYNI-GDPYPSAW-GSWSHFQGTSK--DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 20 ~Y~i-~~~lg~g~-g~w~Vy~g~~k--~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
.|++ +++||.|+ | +||+|+++ .++..|+||++...... ..+.+|+++|+.|+||||+++++++....
T Consensus 21 ~y~~~g~~lG~G~~g--~Vy~~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~hpniv~~~~~~~~~~--- 91 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYG--HVYKAKRKDGKDDKDYALKQIEGTGIS----MSACREIALLRELKHPNVISLQKVFLSHA--- 91 (405)
T ss_dssp HEECSSCCCC-------EEEEEEESSSSCCCCEEEEECSSSSCC----HHHHHHHHHHHHCCCTTBCCCCEEEEETT---
T ss_pred hhhhcCcEeeecCCe--EEEEEEEccCCCCeEEEEEEECCCCCC----HHHHHHHHHHHhcCCCCeeeEeeEEecCC---
Confidence 4777 56899998 8 99999977 56899999999754332 35778999999999999999999997644
Q ss_pred CCcccEEEEEecCC-cChHHHHHHhCcC------CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEE----cC
Q 004025 96 TSTKITIYIVTEPV-MPLSEKIKELGLE------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV----TQ 164 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~~L~~~L~~~~~~------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v----~~ 164 (778)
...+||||||+ ++|..++...... .......+..++.||+.||.|||+ .+|+||||||+||+| +.
T Consensus 92 ---~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~-~~ivH~Dlkp~NIll~~~~~~ 167 (405)
T 3rgf_A 92 ---DRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA-NWVLHRDLKPANILVMGEGPE 167 (405)
T ss_dssp ---TTEEEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEECCSSTT
T ss_pred ---CCeEEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHh-CCEeCCCcCHHHeEEecCCCC
Confidence 34899999999 5788877643211 112344567779999999999996 899999999999999 67
Q ss_pred CCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh
Q 004025 165 TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE 244 (778)
Q Consensus 165 ~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~ 244 (778)
+|.+||+|||+++.+...... ........++..|+|||++.+. ..++.++|||||||++|||++|.+||...
T Consensus 168 ~~~~kl~Dfg~a~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 168 RGRVKIADMGFARLFNSPLKP---LADLDPVVVTFWYRAPELLLGA-----RHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp TTCEEECCTTCCC-------------------CCCTTCCHHHHTTC-----CSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred CCcEEEEECCCceecCCCCcc---cccCCCceecCcccCchhhcCC-----CcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 899999999999876542110 0111223456689999998763 34778999999999999999999988421
Q ss_pred h-------------hhcc----------------------------------------------CCCCcchHHHHHHHhc
Q 004025 245 E-------------LRNT----------------------------------------------ASIPKSLLPDYQRLLS 265 (778)
Q Consensus 245 ~-------------l~~~----------------------------------------------~~iP~~L~~~i~~lL~ 265 (778)
. +..+ ...+..+.+++++||.
T Consensus 240 ~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~ 319 (405)
T 3rgf_A 240 QEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLT 319 (405)
T ss_dssp C------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSC
T ss_pred cccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHcc
Confidence 1 0000 0125667889999999
Q ss_pred cCCCCCCChHHHHhcc
Q 004025 266 SMPSRRLNSSKLIENS 281 (778)
Q Consensus 266 ~dP~~Rps~~~lL~~~ 281 (778)
.||.+|||+.++|+|+
T Consensus 320 ~dP~~R~ta~e~L~hp 335 (405)
T 3rgf_A 320 MDPIKRITSEQAMQDP 335 (405)
T ss_dssp SSGGGSCCHHHHHTSG
T ss_pred CCcccCCCHHHHhcCh
Confidence 9999999999999998
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=316.07 Aligned_cols=231 Identities=18% Similarity=0.227 Sum_probs=177.7
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
.|++.+.||.|+ | +||+|+++.+++.|+||++.... ..+.+++|+++|+.|+||||++++++++..
T Consensus 54 ~y~~~~~lG~G~~g--~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------- 120 (349)
T 2w4o_A 54 FFEVESELGRGATS--IVYRCKQKGTQKPYALKVLKKTV----DKKIVRTEIGVLLRLSHPNIIKLKEIFETP------- 120 (349)
T ss_dssp TEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEEECS-------
T ss_pred cEEEeeEEeeCCCE--EEEEEEECCCCcEEEEEEeccch----hHHHHHHHHHHHHhCCCCCCcceeeeEecC-------
Confidence 599999999998 8 99999999999999999998643 234678999999999999999999999863
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC---CCcEEEEec
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ---TLDWKLHAF 173 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~---~g~~KL~dF 173 (778)
..+||||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++. ++.+||+||
T Consensus 121 -~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~L~~LH~-~~ivH~Dikp~NIll~~~~~~~~~kl~Df 195 (349)
T 2w4o_A 121 -TEISLVLELVTGGELFDRIVEKGY---YSERDAADAVKQILEAVAYLHE-NGIVHRDLKPENLLYATPAPDAPLKIADF 195 (349)
T ss_dssp -SEEEEEECCCCSCBHHHHHTTCSS---CCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEESSSSTTCCEEECCC
T ss_pred -CeEEEEEEeCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCcccEEEecCCCCCCEEEccC
Confidence 4899999999 579988876432 2344566779999999999996 89999999999999975 899999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-----hc
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-----RN 248 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l-----~~ 248 (778)
|++........ .....++..|+|||++.+ ..++.++|+|||||++|||++|..||..... ..
T Consensus 196 g~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~ 262 (349)
T 2w4o_A 196 GLSKIVEHQVL-------MKTVCGTPGYCAPEILRG------CAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRR 262 (349)
T ss_dssp C-----------------------CGGGSCHHHHTT------CCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHH
T ss_pred ccccccCcccc-------cccccCCCCccCHHHhcC------CCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHH
Confidence 99987644211 112234568999999876 3577899999999999999999988743211 11
Q ss_pred ------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+|..+.+++++||..||.+||++.++++|+
T Consensus 263 i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 307 (349)
T 2w4o_A 263 ILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHP 307 (349)
T ss_dssp HHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHST
T ss_pred HHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 134677889999999999999999999999998
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-34 Score=316.20 Aligned_cols=244 Identities=18% Similarity=0.252 Sum_probs=189.3
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|++++.||.|+ | +||+|+++.+|+.||||++...... ..+|+++|+.|+||||+++++++.......
T Consensus 5 ~~~~y~~~~~lG~G~fg--~V~~a~~~~~~~~vAiK~~~~~~~~------~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 76 (383)
T 3eb0_A 5 SSKKYSLGKTLGTGSFG--IVCEVFDIESGKRFALKKVLQDPRY------KNRELDIMKVLDHVNIIKLVDYFYTTGDEE 76 (383)
T ss_dssp -CTTEEEEEEEECC-CE--EEEEEEETTTCCEEEEEEEECCTTS------CCHHHHHHTTCCCTTBCCEEEEEEEC----
T ss_pred ccceEEEEEEEEeccCE--EEEEEEECCCCCEEEEEEEecCcch------HHHHHHHHHHcCCCCccchhheeeecCccc
Confidence 346799999999998 8 9999999999999999999754221 337999999999999999999986532100
Q ss_pred ------------------------------CCcccEEEEEecCC-cChHHHHHHhCc-CCCcchHHHHHHHHHHHHHHHH
Q 004025 96 ------------------------------TSTKITIYIVTEPV-MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSF 143 (778)
Q Consensus 96 ------------------------------~~~~~~lyIVtE~v-~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~f 143 (778)
.....++||||||+ ++|.+.+..... ........+..+++||+.||.|
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 156 (383)
T 3eb0_A 77 PKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGF 156 (383)
T ss_dssp ---------------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 01134699999999 578877765321 1223345567779999999999
Q ss_pred HHcCCCccccccCCCCeEEc-CCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcc
Q 004025 144 LNNDCKLVHGNVCLSSVVVT-QTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSI 222 (778)
Q Consensus 144 LH~~~~ivH~dLkp~NI~v~-~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~ 222 (778)
||+ .+++||||||+||+++ .+|.+||+|||++..+..... .....++..|+|||++.+. ..++.++
T Consensus 157 LH~-~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~-------~~~~~~t~~y~aPE~~~~~-----~~~~~~~ 223 (383)
T 3eb0_A 157 IHS-LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP-------SVAYICSRFYRAPELMLGA-----TEYTPSI 223 (383)
T ss_dssp HHT-TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC-------CCCCCCCSSCCCHHHHTTC-----SSCCTHH
T ss_pred HHH-CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC-------CcCcccCCCccCHHHhcCC-----CCCCcch
Confidence 995 9999999999999998 689999999999987754321 1123456689999998763 3478899
Q ss_pred hhHHHHHHHHHHHhCCCCCChhh----hhc-------------------------------------cCCCCcchHHHHH
Q 004025 223 DSWGLGCLIYELFSGMRLSKTEE----LRN-------------------------------------TASIPKSLLPDYQ 261 (778)
Q Consensus 223 DiwSLG~liyel~tg~~p~~~~~----l~~-------------------------------------~~~iP~~L~~~i~ 261 (778)
|+|||||++|||++|.+||.... +.. ...+|..+.+++.
T Consensus 224 DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 303 (383)
T 3eb0_A 224 DLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLE 303 (383)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHH
T ss_pred hhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHH
Confidence 99999999999999999986421 100 0135667899999
Q ss_pred HHhccCCCCCCChHHHHhcc
Q 004025 262 RLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 262 ~lL~~dP~~Rps~~~lL~~~ 281 (778)
+||..||.+||++.++++|+
T Consensus 304 ~~L~~dP~~R~t~~e~l~hp 323 (383)
T 3eb0_A 304 QILRYEPDLRINPYEAMAHP 323 (383)
T ss_dssp HHCCSSGGGSCCHHHHHTSG
T ss_pred HHccCChhhCCCHHHHhcCH
Confidence 99999999999999999998
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-34 Score=319.70 Aligned_cols=235 Identities=16% Similarity=0.224 Sum_probs=193.1
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..|++.+.||.|+ | +||+|+++.+|+.|++|++..... .....+.+|+++|+.|+||||++++++++.+
T Consensus 51 ~~y~i~~~LG~G~~g--~Vy~~~~~~~~~~~a~K~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~------ 120 (387)
T 1kob_A 51 DYYDILEELGSGAFG--VVHRCVEKATGRVFVAKFINTPYP--LDKYTVKNEISIMNQLHHPKLINLHDAFEDK------ 120 (387)
T ss_dssp GTEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEECCSH--HHHHHHHHHHHHHTTCCSTTBCCEEEEEECS------
T ss_pred cceEEEEEEecCCCE--EEEEEEECCCCCEEEEEEecccch--hhHHHHHHHHHHHHhCCCcCCCeEEEEEEeC------
Confidence 3699999999998 8 999999999999999999986532 2345688999999999999999999999864
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC--CCcEEEEec
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ--TLDWKLHAF 173 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~--~g~~KL~dF 173 (778)
..+||||||| ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++. .+.+||+||
T Consensus 121 --~~~~lv~E~~~gg~L~~~l~~~~~--~l~~~~~~~i~~qi~~aL~~LH~-~givHrDlkp~NIll~~~~~~~vkL~DF 195 (387)
T 1kob_A 121 --YEMVLILEFLSGGELFDRIAAEDY--KMSEAEVINYMRQACEGLKHMHE-HSIVHLDIKPENIMCETKKASSVKIIDF 195 (387)
T ss_dssp --SEEEEEEECCCCCBHHHHTTCTTC--CBCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEESSTTCCCEEECCC
T ss_pred --CEEEEEEEcCCCCcHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHh-CCeeecccchHHeEEecCCCCceEEEec
Confidence 4899999999 479888865431 12344566779999999999996 89999999999999974 577999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----hc-
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN- 248 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~~- 248 (778)
|++........ .....++..|+|||++.+ ..++.++|+|||||++|||++|..||..... ..
T Consensus 196 G~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i 262 (387)
T 1kob_A 196 GLATKLNPDEI-------VKVTTATAEFAAPEIVDR------EPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNV 262 (387)
T ss_dssp TTCEECCTTSC-------EEEECSSGGGCCHHHHTT------CCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHH
T ss_pred ccceecCCCcc-------eeeeccCCCccCchhccC------CCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 99987754211 112245568999999876 3567899999999999999999999864321 10
Q ss_pred -----------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -----------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+|..+.+++.+||..||.+||++.++++|+
T Consensus 263 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp 306 (387)
T 1kob_A 263 KRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHP 306 (387)
T ss_dssp HHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTST
T ss_pred HhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCc
Confidence 135678899999999999999999999999998
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-34 Score=306.05 Aligned_cols=245 Identities=15% Similarity=0.198 Sum_probs=193.0
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc--hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ--DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~--~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
.+|++++.||.|+ | .||+|+++.++..|+||++...... ......+.+|+++++.++||||+++++++..+.
T Consensus 5 ~~y~i~~~lg~G~~g--~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--- 79 (305)
T 2wtk_C 5 GKYLMGDLLGEGSYG--KVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEE--- 79 (305)
T ss_dssp CCBCCCCEEEECSSC--EEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC----
T ss_pred cceeEeeEEecCCCe--EEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC---
Confidence 4799999999998 8 9999999999999999999754211 134567899999999999999999999986433
Q ss_pred CCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
...+||||||+ +.|.+++...... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 80 ---~~~~~lv~e~~~~~l~~~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH~-~~i~H~dlkp~NIl~~~~~~~kl~dfg 154 (305)
T 2wtk_C 80 ---KQKMYMVMEYCVCGMQEMLDSVPEK-RFPVCQAHGYFCQLIDGLEYLHS-QGIVHKDIKPGNLLLTTGGTLKISALG 154 (305)
T ss_dssp -----CEEEEEECCSEEHHHHHHHSTTC-SCCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECTTCCEEECCCT
T ss_pred ---CCeEEEEehhccCCHHHHHHhCccc-ccCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCcccEEEcCCCcEEeeccc
Confidence 34799999999 4688887764422 22344566679999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------ 248 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~------ 248 (778)
++......... .......++..|+|||++.+.- ..++.++|+|||||++|+|++|..||.......
T Consensus 155 ~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~----~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~ 226 (305)
T 2wtk_C 155 VAEALHPFAAD----DTCRTSQGSPAFQPPEIANGLD----TFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIG 226 (305)
T ss_dssp TCEECCTTCSS----CEECCCCSCGGGCCHHHHTCCS----CEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred cccccCccccc----cccccCCCCCCCcChhhccCcc----cCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHh
Confidence 99876532111 0111223455899999987520 123568999999999999999999886532211
Q ss_pred ------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++++||..||.+||++.++++|+
T Consensus 227 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 265 (305)
T 2wtk_C 227 KGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHS 265 (305)
T ss_dssp HCCCCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSH
T ss_pred cCCCCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcCc
Confidence 134677789999999999999999999999998
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-34 Score=313.38 Aligned_cols=241 Identities=17% Similarity=0.242 Sum_probs=194.9
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc------hhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEec
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ------DGHLAAARNGVKRLRTV-RHPNILAFLHSTEVE 91 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~------~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e 91 (778)
+|++.+.||.|+ | .||+|+++.+|+.|+||++...... +...+.+.+|+.+++.+ +||||++++++++..
T Consensus 95 ~y~~~~~lg~G~~g--~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 172 (365)
T 2y7j_A 95 KYDPKDVIGRGVSS--VVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESS 172 (365)
T ss_dssp HEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBS
T ss_pred hcccceEEecCCCE--EEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeC
Confidence 589999999997 7 9999999999999999999865321 12356788999999999 799999999999863
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEE
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~K 169 (778)
..+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++|+||||+||+++.+|.+|
T Consensus 173 --------~~~~lv~e~~~g~~L~~~l~~~~~---l~~~~~~~i~~qi~~~L~~LH~-~gi~H~Dlkp~NIl~~~~~~ik 240 (365)
T 2y7j_A 173 --------SFMFLVFDLMRKGELFDYLTEKVA---LSEKETRSIMRSLLEAVSFLHA-NNIVHRDLKPENILLDDNMQIR 240 (365)
T ss_dssp --------SEEEEEECCCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECTTCCEE
T ss_pred --------CEEEEEEEeCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECCCCCEE
Confidence 4899999999 479999887542 2344466679999999999996 8999999999999999999999
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh---
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--- 246 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l--- 246 (778)
|+|||++..+..... .....++..|+|||++.+........++.++|+|||||++|+|++|..||.....
T Consensus 241 l~DfG~~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~ 313 (365)
T 2y7j_A 241 LSDFGFSCHLEPGEK-------LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILM 313 (365)
T ss_dssp ECCCTTCEECCTTCC-------BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred EEecCcccccCCCcc-------cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHH
Confidence 999999987754321 1122445689999998754322223567899999999999999999998853211
Q ss_pred -h------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 -R------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 -~------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ....+|..+.+++++||..||.+||++.++++|+
T Consensus 314 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp 361 (365)
T 2y7j_A 314 LRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHP 361 (365)
T ss_dssp HHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred HHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCc
Confidence 0 0135667799999999999999999999999998
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=324.62 Aligned_cols=246 Identities=16% Similarity=0.155 Sum_probs=194.2
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
...+|++.+.||.|+ | +||.|+++.+|+.||||++.+... .....+.+++|..+|+.++||||+++++++.++
T Consensus 59 ~~~~f~~~~~lG~G~fG--~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~--- 133 (412)
T 2vd5_A 59 QRDDFEILKVIGRGAFS--EVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDE--- 133 (412)
T ss_dssp CGGGEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECS---
T ss_pred ChhhEEEEEEEeeCCCe--EEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeC---
Confidence 345799999999998 8 999999999999999999975321 112334578999999999999999999999874
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
.++||||||| ++|.+++.+.+. ......+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|
T Consensus 134 -----~~~~lVmE~~~gg~L~~~l~~~~~--~l~~~~~~~~~~qi~~aL~~LH~-~giiHrDLKp~NILld~~g~vkL~D 205 (412)
T 2vd5_A 134 -----NYLYLVMEYYVGGDLLTLLSKFGE--RIPAEMARFYLAEIVMAIDSVHR-LGYVHRDIKPDNILLDRCGHIRLAD 205 (412)
T ss_dssp -----SEEEEEECCCCSCBHHHHHHHHSS--CCCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECTTSCEEECC
T ss_pred -----CEEEEEEcCCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH-CCeeecccCHHHeeecCCCCEEEee
Confidence 4899999999 589999987542 12344566779999999999996 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccc-cccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWT-AVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---- 247 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~-~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~---- 247 (778)
||++........ .......++..|+|||++..... .....++.++|+|||||++|||++|.+||......
T Consensus 206 FGla~~~~~~~~-----~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~ 280 (412)
T 2vd5_A 206 FGSCLKLRADGT-----VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYG 280 (412)
T ss_dssp CTTCEECCTTSC-----EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH
T ss_pred chhheeccCCCc-----cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHH
Confidence 999987754321 11122345669999999873100 00124678999999999999999999998643211
Q ss_pred ------c---c----CCCCcchHHHHHHHhccCCCCC---CChHHHHhcc
Q 004025 248 ------N---T----ASIPKSLLPDYQRLLSSMPSRR---LNSSKLIENS 281 (778)
Q Consensus 248 ------~---~----~~iP~~L~~~i~~lL~~dP~~R---ps~~~lL~~~ 281 (778)
. . ..+|..+.+++++||. +|.+| ++++++++|+
T Consensus 281 ~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hp 329 (412)
T 2vd5_A 281 KIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHP 329 (412)
T ss_dssp HHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSG
T ss_pred HHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCC
Confidence 0 0 2467788999999999 99988 5899999998
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-34 Score=304.80 Aligned_cols=239 Identities=17% Similarity=0.251 Sum_probs=196.4
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
...+|.+++.||.|+ | +||+|+++.+++.|++|++..... .....+.+.+|+.+++.++||||++++++++.+
T Consensus 13 ~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--- 87 (294)
T 2rku_A 13 SRRRYVRGRFLGKGGFA--KCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDN--- 87 (294)
T ss_dssp TTEEEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS---
T ss_pred cccceEEEEEEeecCCE--EEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccC---
Confidence 456799999999998 8 999999999999999999986532 234567788999999999999999999999864
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 88 -----~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~i~~qi~~~l~~lH~-~~i~H~dl~p~Nil~~~~~~~kl~d 158 (294)
T 2rku_A 88 -----DFVFVVLELCRRRSLLELHKRRKA---LTEPEARYYLRQIVLGCQYLHR-NRVIHRDLKLGNLFLNEDLEVKIGD 158 (294)
T ss_dssp -----SEEEEEEECCTTCBHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEECTTCCEEECC
T ss_pred -----CEEEEEEecCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCccccCCChHhEEEcCCCCEEEEe
Confidence 4899999999 478888876542 2244466679999999999996 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh-----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----- 247 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~----- 247 (778)
||++......... .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 159 fg~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~ 226 (294)
T 2rku_A 159 FGLATKVEYDGER------KKVLCGTPNYIAPEVLSK------KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLR 226 (294)
T ss_dssp CTTCEECCSTTCC------BCCCCSCCSSCCHHHHTT------SCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH
T ss_pred ccCceecccCccc------cccccCCCCcCCcchhcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 9999876542211 111234568999999876 35678999999999999999999988653221
Q ss_pred -------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++++||..||.+||++.++++|+
T Consensus 227 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~ 267 (294)
T 2rku_A 227 IKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDE 267 (294)
T ss_dssp HHTTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred HhhccCCCccccCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 1134566788999999999999999999999998
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-34 Score=307.24 Aligned_cols=247 Identities=18% Similarity=0.255 Sum_probs=188.6
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc--
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID-- 94 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~-- 94 (778)
..+|++.+.||.|+ | +||+|+++.+|+.|+||++... .....+.+.+|+++++.++||||+++++++......
T Consensus 10 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 85 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNG--LVFSAVDNDCDKRVAIKKIVLT--DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLT 85 (320)
T ss_dssp TTTEEEEEECC-------CEEEEEETTTTEEEEEEEEECC--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCC
T ss_pred CCceeEEEEeccCCCe--EEEEEEECCCCeEEEEEEEecC--ChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccc
Confidence 45799999999998 8 8999999999999999999854 334566788999999999999999999988532100
Q ss_pred ----cCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEc-CCCcE
Q 004025 95 ----ATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT-QTLDW 168 (778)
Q Consensus 95 ----g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~-~~g~~ 168 (778)
.......+||||||+ ++|.+++.... .....+..++.||+.||.|||+ .+++||||||+||+++ .++.+
T Consensus 86 ~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~----~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nil~~~~~~~~ 160 (320)
T 2i6l_A 86 DDVGSLTELNSVYIVQEYMETDLANVLEQGP----LLEEHARLFMYQLLRGLKYIHS-ANVLHRDLKPANLFINTEDLVL 160 (320)
T ss_dssp C----CCSCSEEEEEEECCSEEHHHHHTTCC----CCHHHHHHHHHHHHHHHHHHHH-TTCBCCCCSGGGEEEETTTTEE
T ss_pred cccccccccCceeEEeeccCCCHHHHhhcCC----ccHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEEcCCCCeE
Confidence 001135899999999 67988886533 2344566779999999999996 8999999999999997 67799
Q ss_pred EEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh--
Q 004025 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-- 246 (778)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l-- 246 (778)
||+|||++........... ......++..|+|||++.+. ..++.++|+|||||++|||++|..||.....
T Consensus 161 kl~Dfg~~~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 232 (320)
T 2i6l_A 161 KIGDFGLARIMDPHYSHKG---HLSEGLVTKWYRSPRLLLSP-----NNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE 232 (320)
T ss_dssp EECCCTTCBCC-----------CCCGGGSCCTTCCHHHHHCT-----TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred EEccCccccccCCCccccc---ccccccccccccCcHHhcCc-----ccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH
Confidence 9999999987653211100 01122345689999987653 3567899999999999999999988853211
Q ss_pred --h--------------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 --R--------------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 --~--------------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ....+|..+.+++++||..||.+||++.++++|+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 307 (320)
T 2i6l_A 233 QMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHP 307 (320)
T ss_dssp HHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSH
T ss_pred HHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCc
Confidence 0 0134788899999999999999999999999998
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-34 Score=301.58 Aligned_cols=238 Identities=14% Similarity=0.164 Sum_probs=191.7
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.||.|+ | +||.|+++.+++.|+||++...... ...+.+.+|+.+++.++||||+++++++...
T Consensus 8 ~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 77 (276)
T 2yex_A 8 DWDLVQTLGEGAYG--EVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYGHRREG------- 77 (276)
T ss_dssp HEEEEEEEEECSSS--EEEEEEETTTCCEEEEEEEEGGGCT-THHHHHHHHHHHHHTCCCTTBCCEEEEEEET-------
T ss_pred ceEEEEEeecCCCc--EEEEEEECCCCcEEEEEEeeeccch-hhhHHHHHHHHHHHhcCCCCceeeeeEEEcC-------
Confidence 599999999998 8 9999999999999999999864332 3456789999999999999999999999864
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 78 -~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 152 (276)
T 2yex_A 78 -NIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMAGVVYLHG-IGITHRDIKPENLLLDERDNLKISDFGLA 152 (276)
T ss_dssp -TEEEEEEECCTTEEGGGGSBTTTB---CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred -CEEEEEEEecCCCcHHHHHhhccC---CCHHHHHHHHHHHHHHHHHHHh-CCeeccCCChHHEEEccCCCEEEeeCCCc
Confidence 4899999999 378877754321 2344566779999999999996 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-----h----
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-----R---- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l-----~---- 247 (778)
.......... ......++..|+|||++.+. ..++.++|+|||||++|+|++|..||..... .
T Consensus 153 ~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 223 (276)
T 2yex_A 153 TVFRYNNRER----LLNKMCGTLPYVAPELLKRR-----EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE 223 (276)
T ss_dssp EECEETTEEC----CBCCCCSCGGGCCGGGGTCS-----SBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHT
T ss_pred cccCCCcchh----cccCCccccCccChHHHhcC-----CCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhh
Confidence 8664321100 01122345589999998763 2235689999999999999999988854211 0
Q ss_pred ------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|..+.+++++||..||.+||++.++++|+
T Consensus 224 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~ 263 (276)
T 2yex_A 224 KKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDR 263 (276)
T ss_dssp TCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCT
T ss_pred cccccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCc
Confidence 1134678899999999999999999999999998
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-34 Score=328.20 Aligned_cols=243 Identities=17% Similarity=0.247 Sum_probs=199.2
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
....|++.+.||.|+ | +||+|+++.+|+.|+||++.+.... ....+.+.+|+++|+.|+||||++++++++..
T Consensus 24 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~--- 98 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFG--EVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDK--- 98 (484)
T ss_dssp HHHHEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECS---
T ss_pred ccCceEEeeEEecCCCE--EEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC---
Confidence 345799999999998 8 9999999999999999999875432 23466789999999999999999999999874
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEE---cCCCcEE
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV---TQTLDWK 169 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v---~~~g~~K 169 (778)
..+|+||||| ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||++ +.++.+|
T Consensus 99 -----~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~i~~qi~~~l~~lH~-~~ivH~Dlkp~Nil~~~~~~~~~~k 169 (484)
T 3nyv_A 99 -----GYFYLVGEVYTGGELFDEIISRKR---FSEVDAARIIRQVLSGITYMHK-NKIVHRDLKPENLLLESKSKDANIR 169 (484)
T ss_dssp -----SEEEEEECCCCSCBHHHHHHTCSC---CBHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEESSSSTTCCEE
T ss_pred -----CEEEEEEecCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeeeCCCCHHHEEEecCCCCCcEE
Confidence 4899999999 579888876542 2344566679999999999996 899999999999999 5678999
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh--
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-- 247 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~-- 247 (778)
|+|||++..+.... ......++..|+|||++.+ .++.++|+|||||++|+|++|.+||......
T Consensus 170 l~Dfg~a~~~~~~~-------~~~~~~gt~~y~aPE~~~~-------~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~ 235 (484)
T 3nyv_A 170 IIDFGLSTHFEASK-------KMKDKIGTAYYIAPEVLHG-------TYDEKCDVWSTGVILYILLSGCPPFNGANEYDI 235 (484)
T ss_dssp ECCTTHHHHBCCCC-------SHHHHTTGGGTCCHHHHHT-------CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred EEeeeeeEEccccc-------ccccCCCCccccCceeecC-------CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHH
Confidence 99999998775421 1122345668999999875 3667999999999999999999998643211
Q ss_pred --------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcccCCccccccc
Q 004025 248 --------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYF 291 (778)
Q Consensus 248 --------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff 291 (778)
....++..+.+++++||..+|.+||++.++++|+ |+..+.
T Consensus 236 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~----~~~~~~ 289 (484)
T 3nyv_A 236 LKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHE----WIQTYT 289 (484)
T ss_dssp HHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSH----HHHHHT
T ss_pred HHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhCh----hhcccc
Confidence 1134677899999999999999999999999999 665443
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-34 Score=306.73 Aligned_cols=248 Identities=15% Similarity=0.197 Sum_probs=175.9
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
+...+|++.+.||.|+ | +||+|+++.+++.|+||++...... ...+.+.+|++.++.++||||+++++++..+
T Consensus 12 i~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 85 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATA--VVQAAYCAPKKEKVAIKRINLEKCQ-TSMDELLKEIQAMSQCHHPNIVSYYTSFVVK--- 85 (303)
T ss_dssp -CCCCCEEEEECC---CC--CEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEESS---
T ss_pred cchhhhhhhheeccccce--EEEEEEECCCCcEEEEEEEEhhhcc-hhHHHHHHHHHHHhhcCCCCEeeEEEEEeec---
Confidence 4556899999999998 8 8999999999999999998754322 3355688999999999999999999999864
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhC-----cCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCc
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELG-----LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD 167 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~-----~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~ 167 (778)
..+|+||||+ ++|.+++.... .........+..++.||+.||.|||+ .+++||||||+||+++.+|.
T Consensus 86 -----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~i~H~dl~p~Nil~~~~~~ 159 (303)
T 2vwi_A 86 -----DELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK-NGQIHRDVKAGNILLGEDGS 159 (303)
T ss_dssp -----SCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCSGGGEEECTTCC
T ss_pred -----CCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCCCCChhhEEEcCCCC
Confidence 3799999999 47998887531 11223345566779999999999996 89999999999999999999
Q ss_pred EEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh
Q 004025 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR 247 (778)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~ 247 (778)
+||+|||++............ .......++..|+|||++.+. ..++.++|+|||||++|+|++|..||......
T Consensus 160 ~kl~dfg~~~~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 233 (303)
T 2vwi_A 160 VQIADFGVSAFLATGGDITRN-KVRKTFVGTPCWMAPEVMEQV-----RGYDFKADIWSFGITAIELATGAAPYHKYPPM 233 (303)
T ss_dssp EEECCCHHHHHCC----------------CCCTTCCHHHHHHH-----HCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGG
T ss_pred EEEEeccchheeccCCCccch-hhhcccCCCccccCHHHhccc-----cCCCchhhHHHHHHHHHHHHhCCCCCccCchh
Confidence 999999999876543211110 011123455689999998652 24678999999999999999999888542110
Q ss_pred ----------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ----------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ----------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|..+.+++.+||..||.+||++.++++|+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~ 289 (303)
T 2vwi_A 234 KVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHK 289 (303)
T ss_dssp GHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTST
T ss_pred hHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhCh
Confidence 0134567789999999999999999999999998
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-34 Score=319.62 Aligned_cols=240 Identities=17% Similarity=0.250 Sum_probs=187.8
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..|++.+.||.|+ | +||+|+++.+|+.|+||++..... ...+|+++|+.|+||||+++++++...... .
T Consensus 54 ~~y~~~~~lG~G~fg--~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~E~~il~~l~hpniv~l~~~~~~~~~~--~ 123 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFG--VVYQAKLCDSGELVAIKKVLQDKR------FKNRELQIMRKLDHCNIVRLRYFFYSSGEK--K 123 (420)
T ss_dssp EEEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEEETT--T
T ss_pred ceEEeeeEEeeCCCE--EEEEEEECCCCcEEEEEEecccch------hHHHHHHHHHHcCCCCccceeeEEeccCCC--C
Confidence 4699999999998 8 999999999999999999975421 234799999999999999999998643211 1
Q ss_pred cccEEEEEecCC-cChHHHHHHhCc-CCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC-CcEEEEecc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT-LDWKLHAFD 174 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~-g~~KL~dFg 174 (778)
...++|+||||+ +.|...+..... ........+..+++||+.||.|||+ .+|+||||||+||+|+.+ +.+||+|||
T Consensus 124 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~ivHrDlkp~NILl~~~~~~~kl~DFG 202 (420)
T 1j1b_A 124 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFG 202 (420)
T ss_dssp TEEEEEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT-TTEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred cceeEEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCChhhEEEeCCCCeEEeccch
Confidence 134688999999 467766654321 1223345567779999999999995 999999999999999955 678999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hhc--
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRN-- 248 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~~-- 248 (778)
+++.+..... .....++..|+|||++.+. ..++.++|+|||||++|||++|.+||.... +..
T Consensus 203 ~a~~~~~~~~-------~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~ 270 (420)
T 1j1b_A 203 SAKQLVRGEP-------NVSYICSRYYRAPELIFGA-----TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 270 (420)
T ss_dssp TCEECCTTCC-------CCSCCSCTTSCCHHHHTTC-----SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred hhhhcccCCC-------ceeeeeCCCcCCHHHHcCC-----CCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9987654211 1123456689999998753 357789999999999999999999985421 100
Q ss_pred -----------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -----------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -----------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+|..+.+++.+||..||.+||++.++++|+
T Consensus 271 ~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp 338 (420)
T 1j1b_A 271 KVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 338 (420)
T ss_dssp HHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred HHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCH
Confidence 013466788999999999999999999999998
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-34 Score=314.97 Aligned_cols=241 Identities=16% Similarity=0.248 Sum_probs=191.0
Q ss_pred CCceeccCCCCCC-CceEEEEeEEC-------CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeE
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSK-------DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTE 89 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k-------~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e 89 (778)
.+|++++.||.|+ | +||.|++. .++..|+||++... ..+...+.+.+|+++|+.+ +||||+++++++.
T Consensus 81 ~~~~~~~~LG~G~fg--~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 157 (370)
T 2psq_A 81 DKLTLGKPLGEGCFG--QVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 157 (370)
T ss_dssp GGEEEEEEESCCSSS--EEEEEEEETCSTTCTTCEEEEEEEECCTT-CBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEEC
T ss_pred HHCEeeeEEeeCCCe--eEEEEEEecccCcCcCcceeEEEEEecCC-cCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEc
Confidence 4699999999998 8 99999874 34557999999754 3344567799999999999 8999999999997
Q ss_pred ecccccCCcccEEEEEecCC--cChHHHHHHhCcC-------------CCcchHHHHHHHHHHHHHHHHHHcCCCccccc
Q 004025 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154 (778)
Q Consensus 90 ~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~-------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~d 154 (778)
.+ ..+||||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++|||
T Consensus 158 ~~--------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~ivHrD 228 (370)
T 2psq_A 158 QD--------GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS-QKCIHRD 228 (370)
T ss_dssp SS--------SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHH-TTEECSC
T ss_pred cC--------CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh-CCeeccc
Confidence 64 3799999999 4899999875421 112334466679999999999996 8999999
Q ss_pred cCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHH
Q 004025 155 VCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYEL 234 (778)
Q Consensus 155 Lkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel 234 (778)
|||+||+|+.+|.+||+|||++..+....... ......++..|+|||++.+ ..++.++|+|||||++|||
T Consensus 229 lkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~----~~~~~~~t~~y~aPE~~~~------~~~~~~~DvwslG~il~el 298 (370)
T 2psq_A 229 LAARNVLVTENNVMKIADFGLARDINNIDYYK----KTTNGRLPVKWMAPEALFD------RVYTHQSDVWSFGVLMWEI 298 (370)
T ss_dssp CCGGGEEECTTCCEEECCCSSCEETTCCCTTC----TTTTTTSCGGGCCHHHHHT------CCCCHHHHHHHHHHHHHHH
T ss_pred cchhhEEECCCCCEEEccccCCcccCccccee----cccCCCcccceECHhHhcC------CCCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999998775432111 0111223457999999876 3677899999999999999
Q ss_pred Hh-CCCCCChhhhhc-------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 235 FS-GMRLSKTEELRN-------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 235 ~t-g~~p~~~~~l~~-------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
++ |..||....... ...+|..+..++.+||..+|.+||++.+++++-
T Consensus 299 lt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L 359 (370)
T 2psq_A 299 FTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 359 (370)
T ss_dssp HTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HcCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 99 888875432111 134566889999999999999999999998764
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-34 Score=313.22 Aligned_cols=250 Identities=18% Similarity=0.303 Sum_probs=190.3
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc---------hhHHHHHHHHHHHHhcCCCCCeeeEeee
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ---------DGHLAAARNGVKRLRTVRHPNILAFLHS 87 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~---------~~~~~~~~~ev~~Lk~LrHPnIlk~~d~ 87 (778)
..+|++.+.||.|+ | +||.|+++. |..|+||++...... ....+.+.+|+++|++++||||++++++
T Consensus 21 ~~~y~~~~~lg~G~~g--~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 97 (362)
T 3pg1_A 21 QSPYTVQRFISSGSYG--AVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDI 97 (362)
T ss_dssp TCSCEEEEEEEEETTE--EEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEE
T ss_pred ccceEEeEEeccCCCE--EEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeee
Confidence 45799999999998 8 999999865 999999999653221 1234778999999999999999999999
Q ss_pred eEecccccCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC
Q 004025 88 TEVENIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL 166 (778)
Q Consensus 88 ~e~e~~~g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g 166 (778)
+...... ....+||||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|
T Consensus 98 ~~~~~~~---~~~~~~lv~e~~~~~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~-~~ivH~Dlkp~NIl~~~~~ 171 (362)
T 3pg1_A 98 FVHFEEP---AMHKLYLVTELMRTDLAQVIHDQRI--VISPQHIQYFMYHILLGLHVLHE-AGVVHRDLHPGNILLADNN 171 (362)
T ss_dssp EEECCTT---TCCEEEEEEECCSEEHHHHHHCTTS--CCCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEECTTC
T ss_pred EEeccCC---CcceEEEEEccCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHH-CcCEecCCChHHEEEcCCC
Confidence 8653311 135899999999 678888875432 22344566779999999999996 8999999999999999999
Q ss_pred cEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh
Q 004025 167 DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL 246 (778)
Q Consensus 167 ~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l 246 (778)
.+||+|||++........ .....++..|+|||++.+. ..++.++|+|||||++|+|++|..||.....
T Consensus 172 ~~kl~Dfg~~~~~~~~~~-------~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwslG~il~~l~~g~~pf~~~~~ 239 (362)
T 3pg1_A 172 DITICDFNLAREDTADAN-------KTHYVTHRWYRAPELVMQF-----KGFTKLVDMWSAGCVMAEMFNRKALFRGSTF 239 (362)
T ss_dssp CEEECCTTC----------------------CGGGCCHHHHTTC-----TTCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred CEEEEecCcccccccccc-------cceecccceecCcHHhcCC-----CCCCcHhHHHhHHHHHHHHHhCCCCCCCCCH
Confidence 999999999975543211 1122344579999998753 3577899999999999999999998864210
Q ss_pred ----h----------------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhccc
Q 004025 247 ----R----------------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSV 282 (778)
Q Consensus 247 ----~----------------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~ 282 (778)
. ....++..+.+++.+||..||.+||++.++++|+
T Consensus 240 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp- 318 (362)
T 3pg1_A 240 YNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHP- 318 (362)
T ss_dssp HHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSG-
T ss_pred HHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCc-
Confidence 0 0123466688999999999999999999999999
Q ss_pred CCcccccccc
Q 004025 283 GDFWMTEYFQ 292 (778)
Q Consensus 283 ~~~w~~~ff~ 292 (778)
|+..++.
T Consensus 319 ---~f~~~~~ 325 (362)
T 3pg1_A 319 ---YFESLFD 325 (362)
T ss_dssp ---GGTTTCC
T ss_pred ---hhhhccC
Confidence 6655543
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-34 Score=314.41 Aligned_cols=246 Identities=17% Similarity=0.165 Sum_probs=190.0
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCC---CchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTN---AQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~---~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
.+|++.+.||.|+ | +||+|+++.++..|+||++.+.. ......+.+.+|+++|+.++||||+++++++++.
T Consensus 26 ~~y~~~~~lG~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~--- 100 (345)
T 3hko_A 26 KKYHLKGAIGQGSYG--VVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE--- 100 (345)
T ss_dssp HHEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS---
T ss_pred hheeecceeeecCCe--EEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC---
Confidence 3699999999998 8 99999999999999999997532 1223466789999999999999999999999864
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCc-------------------------------------CCCcchHHHHHHHH
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGL-------------------------------------EGSQRDEYYAWGLN 135 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~-------------------------------------~~~~~~~~i~~gl~ 135 (778)
..+||||||| ++|.+++..... ........+..++.
T Consensus 101 -----~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 175 (345)
T 3hko_A 101 -----QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMR 175 (345)
T ss_dssp -----SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHH
T ss_pred -----CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHH
Confidence 4899999999 579888752110 00012334566799
Q ss_pred HHHHHHHHHHcCCCccccccCCCCeEEcCCC--cEEEEecccccccCCCCCCCCCCccccccccCCCCCCcccccccccc
Q 004025 136 QIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL--DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTA 213 (778)
Q Consensus 136 QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g--~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~ 213 (778)
||+.||.|||+ .+++||||||+||+++.++ .+||+|||++..+....... ........++..|+|||++.+.
T Consensus 176 qi~~~l~~LH~-~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~--- 249 (345)
T 3hko_A 176 QIFSALHYLHN-QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGE--YYGMTTKAGTPYFVAPEVLNTT--- 249 (345)
T ss_dssp HHHHHHHHHHH-TTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC----------CCCGGGCCHHHHTCS---
T ss_pred HHHHHHHHHHH-CCccccCCChhhEEEecCCCceEEEeeccccccccccCccc--cccccccCCCccccCchhhccC---
Confidence 99999999996 8999999999999998776 89999999998764322111 1111223445689999998642
Q ss_pred ccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----h------------ccCCCCcchHHHHHHHhccCCCCCCChHHH
Q 004025 214 VRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKL 277 (778)
Q Consensus 214 ~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~l 277 (778)
...++.++|+|||||++|||++|..||..... . ....++..+.+++.+||..||.+||++.++
T Consensus 250 -~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 328 (345)
T 3hko_A 250 -NESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRA 328 (345)
T ss_dssp -SSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred -CCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHH
Confidence 13567899999999999999999999853211 1 012367789999999999999999999999
Q ss_pred Hhcc
Q 004025 278 IENS 281 (778)
Q Consensus 278 L~~~ 281 (778)
++|+
T Consensus 329 l~hp 332 (345)
T 3hko_A 329 LQHP 332 (345)
T ss_dssp HHSH
T ss_pred hcCh
Confidence 9998
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-34 Score=314.53 Aligned_cols=239 Identities=17% Similarity=0.245 Sum_probs=190.7
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..|.+.+.||.|+ | +||+|+++.+|+.|+||++......+.....+.+|+.+|+.++||||+++++++...... .
T Consensus 24 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~--~ 99 (353)
T 3coi_A 24 KTYVSPTHVGSGAYG--SVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSL--R 99 (353)
T ss_dssp TTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSG--G
T ss_pred ceEEEeeeEecCCCe--EEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccc--c
Confidence 4799999999998 8 999999999999999999987655555667889999999999999999999999764310 0
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
....+|+||||+ ++|.+++.. ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 100 ~~~~~~lv~e~~~~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~LH~-~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~ 173 (353)
T 3coi_A 100 NFYDFYLVMPFMQTDLQKIMGL-----KFSEEKIQYLVYQMLKGLKYIHS-AGVVHRDLKPGNLAVNEDCELKILDFGLA 173 (353)
T ss_dssp GCCCCEEEEECCSEEGGGTTTS-----CCCHHHHHHHHHHHHHHHHHHHH-TTCCCSSCCGGGEEECTTCCEEECSTTCT
T ss_pred cceeEEEEeccccCCHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEeECCCCcEEEeecccc
Confidence 012469999999 567665532 12345567779999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----h-----
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R----- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~----- 247 (778)
....... ....++..|+|||++.+. ..++.++|+|||||++|+|++|..||..... .
T Consensus 174 ~~~~~~~---------~~~~~t~~y~aPE~~~~~-----~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~ 239 (353)
T 3coi_A 174 RHADAEM---------TGYVVTRWYRAPEVILSW-----MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKV 239 (353)
T ss_dssp TC-----------------CCSBCCSCHHHHSCC-----SCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHH
T ss_pred cCCCCCc---------cccccCcCcCCHHHHhCc-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 8654321 112345689999998753 3567899999999999999999998864210 0
Q ss_pred ----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ----------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++.+||..||.+||++.++++|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp 307 (353)
T 3coi_A 240 TGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHP 307 (353)
T ss_dssp HCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSG
T ss_pred hCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCc
Confidence 0124567789999999999999999999999998
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-34 Score=317.97 Aligned_cols=234 Identities=18% Similarity=0.230 Sum_probs=183.2
Q ss_pred Cceec-cCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHH-hcCCCCCeeeEeeeeEecccccC
Q 004025 20 PYNIG-DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRL-RTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 20 ~Y~i~-~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~L-k~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
+|.+. +.||.|+ | +||+|+++.+|+.|+||++... ..+.+|+.++ +.++||||++++++++....+
T Consensus 62 ~y~~~~~~LG~G~~g--~V~~~~~~~~~~~vAiK~~~~~-------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~-- 130 (400)
T 1nxk_A 62 DYKVTSQVLGLGING--KVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAG-- 130 (400)
T ss_dssp TEEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT--
T ss_pred cceeccceeeeccCe--EEEEEEECCCCCEEEEEEeCcc-------hhHHHHHHHHHHhcCCCCcceEeEEEeecccC--
Confidence 57776 6799998 8 9999999999999999999742 2466788877 456899999999999752211
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC---CCcEEEE
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ---TLDWKLH 171 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~---~g~~KL~ 171 (778)
..++||||||| ++|.+++...... ......+..++.||+.||.|||+ .+|+||||||+||+++. +|.+||+
T Consensus 131 --~~~~~lv~E~~~gg~L~~~l~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~Nill~~~~~~~~~kl~ 206 (400)
T 1nxk_A 131 --RKCLLIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLT 206 (400)
T ss_dssp --EEEEEEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEESSSSTTCCEEEC
T ss_pred --CcEEEEEEEeCCCCcHHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHH-CCccccCcCcceEEEecCCCCccEEEE
Confidence 34899999999 4799999764321 12345567779999999999996 89999999999999997 7899999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc---
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN--- 248 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~--- 248 (778)
|||++........ .....++..|+|||++.+ ..++.++|+|||||++|||++|..||.......
T Consensus 207 DFG~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~ 273 (400)
T 1nxk_A 207 DFGFAKETTSHNS-------LTTPCYTPYYVAPEVLGP------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP 273 (400)
T ss_dssp CCTTCEECC------------------CTTCCGGGSCC------CCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCC
T ss_pred ecccccccCCCCc-------cccCCCCCCccCHhhcCC------CCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccH
Confidence 9999987654211 112344668999999876 467789999999999999999999885432100
Q ss_pred -----------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -----------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -----------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++++||..||.+||++.++++|+
T Consensus 274 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 323 (400)
T 1nxk_A 274 GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 323 (400)
T ss_dssp SHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred HHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 134677899999999999999999999999998
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-34 Score=329.27 Aligned_cols=243 Identities=13% Similarity=0.139 Sum_probs=197.7
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
+....|++.+.||.|+ | +||.|+++.+|+.|+||++.+..... .....+.+|+++|+.++||||+++++++++.
T Consensus 182 ~~~~~f~~~~~LG~G~fG--~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~-- 257 (543)
T 3c4z_A 182 MGEDWFLDFRVLGRGGFG--EVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETK-- 257 (543)
T ss_dssp CCGGGEEEEEEEEECSSS--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECS--
T ss_pred CChhheEEEEEEeeCCCe--EEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeC--
Confidence 3456799999999998 8 99999999999999999997542211 2356788999999999999999999999874
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcC-CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEE
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLE-GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~-~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
..+||||||| ++|..++...... .......+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||
T Consensus 258 ------~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~-~gIvHrDLKP~NILl~~~g~vkL 330 (543)
T 3c4z_A 258 ------TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ-RNIIYRDLKPENVLLDDDGNVRI 330 (543)
T ss_dssp ------SEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEECTTSCEEE
T ss_pred ------CEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHH-cCCcccCCChHHEEEeCCCCEEE
Confidence 4899999999 5799998765421 223344566779999999999996 89999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-----
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----- 245 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----- 245 (778)
+|||++..+..... ......++..|+|||++.+ ..++.++|+|||||++|||++|.+||....
T Consensus 331 ~DFGla~~~~~~~~------~~~~~~GT~~Y~APE~l~~------~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~ 398 (543)
T 3c4z_A 331 SDLGLAVELKAGQT------KTKGYAGTPGFMAPELLLG------EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN 398 (543)
T ss_dssp CCCTTCEECCTTCC------CBCCCCSCTTTSCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCH
T ss_pred eecceeeeccCCCc------ccccccCCccccChhhhcC------CCCChHHhcCcchHHHHHHHhCCCCCCCCccchhH
Confidence 99999987754321 1122356679999999886 367889999999999999999999986431
Q ss_pred --h-----hc----cCCCCcchHHHHHHHhccCCCCCCC-----hHHHHhcc
Q 004025 246 --L-----RN----TASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENS 281 (778)
Q Consensus 246 --l-----~~----~~~iP~~L~~~i~~lL~~dP~~Rps-----~~~lL~~~ 281 (778)
+ .. ...++..+.+++++||..||.+||+ +.++++|+
T Consensus 399 ~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hp 450 (543)
T 3c4z_A 399 KELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHP 450 (543)
T ss_dssp HHHHHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSG
T ss_pred HHHHHHHhhcccCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCc
Confidence 1 11 1346777899999999999999996 48899998
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-34 Score=314.84 Aligned_cols=230 Identities=14% Similarity=0.218 Sum_probs=184.6
Q ss_pred ccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEE
Q 004025 24 GDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 24 ~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~l 102 (778)
.+.||.|+ | +||+|+++.+|+.|+||++..... ...+.+++|+++|+.|+||||++++++++.. ..+
T Consensus 94 ~~~lG~G~~g--~Vy~a~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~--------~~~ 161 (373)
T 2x4f_A 94 TEILGGGRFG--QVHKCEETATGLKLAAKIIKTRGM--KDKEEVKNEISVMNQLDHANLIQLYDAFESK--------NDI 161 (373)
T ss_dssp EEECC-------CEEEEEETTTCCEEEEEEEECCSH--HHHHHHHHHHHHHTTCCCTTBCCEEEEEECS--------SEE
T ss_pred ceEEecCcCE--EEEEEEEcCCCcEEEEEEEccccc--ccHHHHHHHHHHHHhCCCCCCCeEEEEEEEC--------CEE
Confidence 56799998 8 899999999999999999986432 3456789999999999999999999999864 489
Q ss_pred EEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEE--cCCCcEEEEecccccc
Q 004025 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV--TQTLDWKLHAFDVLSE 178 (778)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v--~~~g~~KL~dFgla~~ 178 (778)
||||||| ++|.+++...... .....+..++.||+.||.|||+ .+|+||||||+||++ +.++.+||+|||++..
T Consensus 162 ~lv~E~~~~~~L~~~l~~~~~~--l~~~~~~~i~~qi~~aL~~LH~-~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~ 238 (373)
T 2x4f_A 162 VLVMEYVDGGELFDRIIDESYN--LTELDTILFMKQICEGIRHMHQ-MYILHLDLKPENILCVNRDAKQIKIIDFGLARR 238 (373)
T ss_dssp EEEEECCTTCEEHHHHHHTGGG--CCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEEEETTTTEEEECCCSSCEE
T ss_pred EEEEeCCCCCcHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHH-CCcccccCCHHHEEEecCCCCcEEEEeCCCcee
Confidence 9999999 4798888754321 2233455669999999999996 899999999999999 5678999999999987
Q ss_pred cCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hh-------
Q 004025 179 FDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LR------- 247 (778)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~------- 247 (778)
+..... .....++..|+|||++.+ ..++.++|+|||||++|||++|..||.... +.
T Consensus 239 ~~~~~~-------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~ 305 (373)
T 2x4f_A 239 YKPREK-------LKVNFGTPEFLAPEVVNY------DFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRW 305 (373)
T ss_dssp CCTTCB-------CCCCCSSCTTCCHHHHTT------CBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCC
T ss_pred cCCccc-------cccccCCCcEeChhhccC------CCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC
Confidence 754321 111245668999999876 356779999999999999999999885421 11
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -----~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++.+||..||.+||++.++++|+
T Consensus 306 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp 344 (373)
T 2x4f_A 306 DLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHP 344 (373)
T ss_dssp CSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred CCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence 1135778899999999999999999999999998
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-34 Score=303.48 Aligned_cols=237 Identities=18% Similarity=0.257 Sum_probs=193.7
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
...+|++.+.||.|+ | +||.|+++.++..|+||++...... ......+.+|+++++.++||||++++++++.+
T Consensus 12 ~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 86 (284)
T 2vgo_A 12 TIDDFDIGRPLGKGKFG--NVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDR--- 86 (284)
T ss_dssp CGGGEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS---
T ss_pred hhhhceeeheecCCCCe--EEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcC---
Confidence 345799999999998 7 9999999999999999999753211 12345788999999999999999999999864
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 87 -----~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~Nil~~~~~~~kl~D 157 (284)
T 2vgo_A 87 -----KRIYLMLEFAPRGELYKELQKHGR---FDEQRSATFMEELADALHYCHE-RKVIHRDIKPENLLMGYKGELKIAD 157 (284)
T ss_dssp -----SEEEEEECCCTTEEHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHT-TTEECCCCSGGGEEECTTCCEEECC
T ss_pred -----CEEEEEEEeCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCceecCCCHHHEEEcCCCCEEEec
Confidence 4899999999 479999887643 2344466679999999999995 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh-----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----- 247 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~----- 247 (778)
||++....... .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 158 fg~~~~~~~~~--------~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~ 223 (284)
T 2vgo_A 158 FGWSVHAPSLR--------RRTMCGTLDYLPPEMIEG------KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRR 223 (284)
T ss_dssp CTTCEECSSSC--------BCCCCSCGGGCCHHHHTT------CCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH
T ss_pred ccccccCcccc--------cccccCCCCcCCHHHhcc------CCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHH
Confidence 99987654321 111234558999999876 35678999999999999999999988643211
Q ss_pred -------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++.+||..||.+||++.++++|+
T Consensus 224 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~ 264 (284)
T 2vgo_A 224 IVNVDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHP 264 (284)
T ss_dssp HHTTCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCH
T ss_pred HhccccCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCH
Confidence 0134677789999999999999999999999998
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=306.45 Aligned_cols=240 Identities=10% Similarity=0.030 Sum_probs=191.9
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~ 94 (778)
...+|++.+.||.|+ | +||+|+++.+|+.|+||++...... +.+.+|+++++.| +||||+++++++..+
T Consensus 7 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~E~~~l~~l~~h~~i~~~~~~~~~~--- 77 (330)
T 2izr_A 7 VGPNFRVGKKIGCGNFG--ELRLGKNLYTNEYVAIKLEPMKSRA----PQLHLEYRFYKQLGSGDGIPQVYYFGPCG--- 77 (330)
T ss_dssp ETTTEEEEEECCC-CTT--SEEEEEETTTTEEEEEEEEETTCSS----CCHHHHHHHHHHHCSCTTSCCEEEEEEET---
T ss_pred EcCCeEEEEEeeccCCc--eEEEEEECCCCcEEEEEEeccccch----HHHHHHHHHHHHhhCCCCCCEEEEEEecC---
Confidence 456799999999998 8 8999999999999999999865433 2477899999999 899999999999874
Q ss_pred cCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCc-----E
Q 004025 95 ATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD-----W 168 (778)
Q Consensus 95 g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~-----~ 168 (778)
..+||||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|. +
T Consensus 78 -----~~~~lv~e~~~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH~-~~iiHrDlkp~Nill~~~~~~~~~~~ 149 (330)
T 2izr_A 78 -----KYNAMVLELLGPSLEDLFDLCDR--TFSLKTVLMIAIQLISRMEYVHS-KNLIYRDVKPENFLIGRPGNKTQQVI 149 (330)
T ss_dssp -----TEEEEEEECCCCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEECCGGGTCTTSE
T ss_pred -----CccEEEEEeCCCCHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHeeeccCCCCCCceE
Confidence 4899999999 579999986421 23344566779999999999996 89999999999999999887 9
Q ss_pred EEEecccccccCCCCCCCCCCcc-ccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh--
Q 004025 169 KLHAFDVLSEFDGNNEAANGPML-QYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-- 245 (778)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~-~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-- 245 (778)
||+|||++..+.........+.. .....++..|+|||++.+ ..++.++|+|||||++|||++|..||....
T Consensus 150 kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~ 223 (330)
T 2izr_A 150 HIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLG------KEQSRRDDLEALGHMFMYFLRGSLPWQGLKAD 223 (330)
T ss_dssp EECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT------CCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCS
T ss_pred EEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcC------CCCCchhHHHHHHHHHHHHhcCCCCccccccc
Confidence 99999999877553321111111 123345669999999887 357789999999999999999999986421
Q ss_pred -h----hc-------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 246 -L----RN-------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 246 -l----~~-------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
+ .. ...+| .+..++.+||..+|..||++.++++.
T Consensus 224 ~~~~~~~~i~~~~~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~ 275 (330)
T 2izr_A 224 TLKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKL 275 (330)
T ss_dssp SHHHHHHHHHHHHHHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHH
T ss_pred cHHHHHHHHHhhhccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHH
Confidence 1 00 12356 89999999999999999999888763
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-34 Score=308.82 Aligned_cols=231 Identities=20% Similarity=0.271 Sum_probs=173.8
Q ss_pred Cceec---cCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecccc
Q 004025 20 PYNIG---DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENID 94 (778)
Q Consensus 20 ~Y~i~---~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~ 94 (778)
+|++. +.||.|+ | +||+|+++.+|+.|+||++.+. ....+.+|+..++.++ ||||++++++++++
T Consensus 9 ~y~~~~~~~~lG~G~~g--~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~--- 78 (325)
T 3kn6_A 9 HYDLDLKDKPLGEGSFS--ICRKCVHKKSNQAFAVKIISKR-----MEANTQKEITALKLCEGHPNIVKLHEVFHDQ--- 78 (325)
T ss_dssp HEEECTTSCCSEEETTE--EEEEEEETTTCCEEEEEEEEGG-----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECS---
T ss_pred ccccccCCCccccCCCe--EEEEEEECCCCCEEEEEEEChh-----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcC---
Confidence 46664 6799998 8 9999999999999999999753 3456788999999998 99999999999864
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC---cEE
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL---DWK 169 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g---~~K 169 (778)
..+||||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.++ .+|
T Consensus 79 -----~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~LH~-~~ivH~Dlkp~NIll~~~~~~~~~k 149 (325)
T 3kn6_A 79 -----LHTFLVMELLNGGELFERIKKKKH---FSETEASYIMRKLVSAVSHMHD-VGVVHRDLKPENLLFTDENDNLEIK 149 (325)
T ss_dssp -----SEEEEEECCCCSCBHHHHHHHCSC---CCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEEEC----CEEE
T ss_pred -----CEEEEEEEccCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCHHHEEEecCCCcccEE
Confidence 4899999999 479999987542 2344566679999999999996 8999999999999998766 799
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh---
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--- 246 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l--- 246 (778)
|+|||++......... .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||.....
T Consensus 150 l~Dfg~a~~~~~~~~~------~~~~~~t~~y~aPE~~~~------~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~ 217 (325)
T 3kn6_A 150 IIDFGFARLKPPDNQP------LKTPCFTLHYAAPELLNQ------NGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT 217 (325)
T ss_dssp ECCCTTCEECCC----------------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------
T ss_pred EeccccceecCCCCCc------ccccCCCcCccCHHHhcC------CCCCCccchHHHHHHHHHHHhCCCCCCCCccccc
Confidence 9999999866542211 112234568999999876 3577899999999999999999999864211
Q ss_pred --------hcc------------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 --------RNT------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 --------~~~------------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
..+ ..++..+.+++++||..||.+||++.++++|+
T Consensus 218 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~ 272 (325)
T 3kn6_A 218 CTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNE 272 (325)
T ss_dssp CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCG
T ss_pred cccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcCh
Confidence 111 24677899999999999999999999999998
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-34 Score=300.32 Aligned_cols=236 Identities=20% Similarity=0.240 Sum_probs=192.2
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch----hHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD----GHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~----~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
..|++.+.||.|+ | +||+|+++.+|+.|+||++....... ...+.+.+|+++++.++||||+++++++...
T Consensus 5 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-- 80 (283)
T 3bhy_A 5 DHYEMGEELGSGQFA--IVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENK-- 80 (283)
T ss_dssp HHEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS--
T ss_pred hhhhhHHhhcccCce--EEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCC--
Confidence 3599999999998 7 99999999999999999998653322 2356789999999999999999999999863
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC----c
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL----D 167 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g----~ 167 (778)
..+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.++ .
T Consensus 81 ------~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~Nil~~~~~~~~~~ 150 (283)
T 3bhy_A 81 ------TDVVLILELVSGGELFDFLAEKES---LTEDEATQFLKQILDGVHYLHS-KRIAHFDLKPENIMLLDKNVPNPR 150 (283)
T ss_dssp ------SEEEEEEECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEESCSSSSSCC
T ss_pred ------CeEEEEEeecCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCccCCCCChHHEEEecCCCCCCc
Confidence 4899999999 579999976542 2344566779999999999996 8999999999999999877 8
Q ss_pred EEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-
Q 004025 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL- 246 (778)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l- 246 (778)
+||+|||++........ .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||.....
T Consensus 151 ~kl~dfg~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~ 217 (283)
T 3bhy_A 151 IKLIDFGIAHKIEAGNE-------FKNIFGTPEFVAPEIVNY------EPLGLEADMWSIGVITYILLSGASPFLGETKQ 217 (283)
T ss_dssp EEECCCTTCEECC---------------CCCGGGCCHHHHTT------CCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred eEEEecccceeccCCCc-------ccccCCCcCccCcceecC------CCCCcchhhhhHHHHHHHHHHCCCCCCCcchH
Confidence 99999999987654221 111234558999999876 3567899999999999999999988854211
Q ss_pred ---h------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 ---R------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ---~------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ....+|..+.+++++||..||.+||++.++++|+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~ 267 (283)
T 3bhy_A 218 ETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHS 267 (283)
T ss_dssp HHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCH
T ss_pred HHHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCH
Confidence 1 1135677789999999999999999999999998
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-34 Score=307.92 Aligned_cols=232 Identities=16% Similarity=0.221 Sum_probs=188.1
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEeccccc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDA 95 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~g 95 (778)
..+|++.+.||.|+ | +||+|+++.+++.|+||++.... .+.+.+|+++|+.|+ ||||+++++++....
T Consensus 35 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~--- 104 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYS--EVFEAINITNNEKVVVKILKPVK-----KKKIKREIKILENLRGGPNIITLADIVKDPV--- 104 (330)
T ss_dssp GGGEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEECSCC-----HHHHHHHHHHHHHHTTSTTBCCEEEEEECTT---
T ss_pred CCceEEEEEecccCCe--EEEEEEECCCCcEEEEEEecccc-----hHHHHHHHHHHHHcCCCCCEEEeeeeeccCC---
Confidence 45799999999998 8 99999999999999999997432 356889999999998 999999999998643
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC-cEEEEe
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-DWKLHA 172 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g-~~KL~d 172 (778)
...+|+||||+ ++|..+++. .....+..++.||+.||.|||+ .+++||||||+||+++.++ .+||+|
T Consensus 105 ---~~~~~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~qi~~~l~~lH~-~~ivH~Dikp~Nil~~~~~~~~kl~D 174 (330)
T 3nsz_A 105 ---SRTPALVFEHVNNTDFKQLYQT------LTDYDIRFYMYEILKALDYCHS-MGIMHRDVKPHNVMIDHEHRKLRLID 174 (330)
T ss_dssp ---TCCEEEEEECCCCCCHHHHGGG------CCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEEETTTTEEEECC
T ss_pred ---CCceEEEEeccCchhHHHHHHh------CCHHHHHHHHHHHHHHHHHHHh-CCeeeCCCCHHHEEEcCCCCEEEEEe
Confidence 34799999999 468777654 2234466779999999999996 8999999999999999777 899999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh-----hhh
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-----ELR 247 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~-----~l~ 247 (778)
||++........ .....++..|+|||++.+. ..++.++|+|||||++|+|++|..||... .+.
T Consensus 175 fg~a~~~~~~~~-------~~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~ 242 (330)
T 3nsz_A 175 WGLAEFYHPGQE-------YNVRVASRYFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 242 (330)
T ss_dssp CTTCEECCTTCC-------CCSCCSCGGGCCHHHHTTC-----CCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHH
T ss_pred CCCceEcCCCCc-------cccccccccccChhhhcCC-----CcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHH
Confidence 999987654321 1112345589999998753 35778999999999999999999887211 000
Q ss_pred c---------------------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 N---------------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ~---------------------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ...++..+.+++.+||..||.+||++.++++|+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp 321 (330)
T 3nsz_A 243 RIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 321 (330)
T ss_dssp HHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSG
T ss_pred HHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCc
Confidence 0 011678899999999999999999999999998
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-34 Score=309.74 Aligned_cols=245 Identities=18% Similarity=0.212 Sum_probs=189.8
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCC--CCeeeEeeeeEeccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRH--PNILAFLHSTEVENI 93 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrH--PnIlk~~d~~e~e~~ 93 (778)
....|++.+.||.|+ | +||+|.++ +++.|+||++..........+.+.+|+++|+.|+| |||+++++++..+
T Consensus 7 ~~~~y~i~~~lG~G~~g--~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~-- 81 (343)
T 3dbq_A 7 KGRIYSILKQIGSGGSS--KVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD-- 81 (343)
T ss_dssp SSCEEEEEEEESCCSSE--EEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS--
T ss_pred ecCEEEEEEEEecCCCe--EEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeC--
Confidence 456799999999998 8 99999985 68999999998766666667789999999999987 9999999999864
Q ss_pred ccCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 94 DATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+|||||+. ++|.+++..... .....+..++.||+.||.|||+ .+|+||||||+||+++ +|.+||+|
T Consensus 82 ------~~~~lv~e~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~al~~lH~-~~iiHrDikp~NIll~-~~~~kl~D 150 (343)
T 3dbq_A 82 ------QYIYMVMECGNIDLNSWLKKKKS---IDPWERKSYWKNMLEAVHTIHQ-HGIVHSDLKPANFLIV-DGMLKLID 150 (343)
T ss_dssp ------SEEEEEECCCSEEHHHHHHHSCC---CCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEEE-TTEEEECC
T ss_pred ------CEEEEEEeCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCcceEEEE-CCcEEEee
Confidence 4899999977 579999987543 2234456669999999999996 8999999999999997 68899999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCcccccccccc-----ccCCCCCcchhHHHHHHHHHHHhCCCCCChh--h
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTA-----VRKSPPWSIDSWGLGCLIYELFSGMRLSKTE--E 245 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~-----~~~~~~~~~DiwSLG~liyel~tg~~p~~~~--~ 245 (778)
||++..+..... ........++..|+|||++.+.... ....++.++|+|||||++|||++|..||... .
T Consensus 151 FG~a~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~ 226 (343)
T 3dbq_A 151 FGIANQMQPDTT----SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 226 (343)
T ss_dssp CSSSCCC----------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH
T ss_pred cccccccCcccc----cccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH
Confidence 999987754321 1111223456799999998641100 0135677999999999999999999988631 1
Q ss_pred ---hhc----------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 246 ---LRN----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 246 ---l~~----------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+.. ....+..+.+++.+||..||.+||++.++++|+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 227 ISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 275 (343)
T ss_dssp HHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred HHHHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence 110 122345688999999999999999999999998
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-34 Score=325.84 Aligned_cols=245 Identities=13% Similarity=0.114 Sum_probs=193.3
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
..+|++.+.||.|+ | +||+|+++.+++.||||++.+.... ......+++|+.+|+.++||||++++++++++
T Consensus 73 ~~~y~~~~~LG~G~fG--~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~---- 146 (437)
T 4aw2_A 73 REDFEILKVIGRGAFG--EVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDD---- 146 (437)
T ss_dssp GGGEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECS----
T ss_pred hhheEEEEEEEeCCCE--EEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeC----
Confidence 45799999999998 8 9999999999999999999752111 11223478899999999999999999999874
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..+||||||| ++|.+++.... .......+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+||
T Consensus 147 ----~~~~lV~Ey~~gg~L~~~l~~~~--~~l~e~~~~~~~~qi~~aL~~LH~-~giiHrDLKp~NILl~~~g~vkL~DF 219 (437)
T 4aw2_A 147 ----NNLYLVMDYYVGGDLLTLLSKFE--DRLPEEMARFYLAEMVIAIDSVHQ-LHYVHRDIKPDNILMDMNGHIRLADF 219 (437)
T ss_dssp ----SEEEEEECCCTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECTTSCEEECCC
T ss_pred ----CEEEEEEecCCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHHh-CCeEecccCHHHeeEcCCCCEEEcch
Confidence 4899999999 58999998632 123345566779999999999996 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh----c-
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----N- 248 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~----~- 248 (778)
|++........ .......++..|+|||++.... .....++.++|+|||||++|||++|.+||...... .
T Consensus 220 Gla~~~~~~~~-----~~~~~~~GT~~Y~APE~l~~~~-~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i 293 (437)
T 4aw2_A 220 GSCLKLMEDGT-----VQSSVAVGTPDYISPEILQAME-GGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 293 (437)
T ss_dssp TTCEECCTTSC-----EECCSCCSCGGGCCHHHHHHHH-TSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH
T ss_pred hhhhhcccCCC-----cccccccCCcCeeChHHHhhcc-cCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhh
Confidence 99987654321 1112234566999999986210 00134678999999999999999999998643211 0
Q ss_pred ------------cCCCCcchHHHHHHHhccCCCC--CCChHHHHhcc
Q 004025 249 ------------TASIPKSLLPDYQRLLSSMPSR--RLNSSKLIENS 281 (778)
Q Consensus 249 ------------~~~iP~~L~~~i~~lL~~dP~~--Rps~~~lL~~~ 281 (778)
...++..+.+++++||..+|++ |+++.++++|+
T Consensus 294 ~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hp 340 (437)
T 4aw2_A 294 MNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHP 340 (437)
T ss_dssp HTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSG
T ss_pred hhccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCC
Confidence 1236677889999999888888 99999999998
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-33 Score=298.85 Aligned_cols=243 Identities=17% Similarity=0.223 Sum_probs=190.8
Q ss_pred CCCCCceecc-----CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeE
Q 004025 16 VKDLPYNIGD-----PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTE 89 (778)
Q Consensus 16 ~~~~~Y~i~~-----~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e 89 (778)
+..+.|++.+ .||.|+ | +||+|+++.++..|+||++..... ...+.+.+|+.+++.++||||+++++++.
T Consensus 14 ~~~~~~~~~~~~~~~~lg~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 89 (295)
T 2clq_A 14 LLEYDYEYDENGDRVVLGKGTYG--IVYAGRDLSNQVRIAIKEIPERDS--RYSQPLHEEIALHKHLKHKNIVQYLGSFS 89 (295)
T ss_dssp CCCEEECBCTTSSBCEEEECSSS--EEEEEEETTTCCEEEEEEEECCCC-----HHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred cccccccccCCCCcEEEeecCcE--EEEEEEECCCCeEEEEEEccCCch--HHHHHHHHHHHHHHhCCCCCEeeEeeEEE
Confidence 3445566555 788888 8 999999999999999999986432 34567889999999999999999999998
Q ss_pred ecccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC-CC
Q 004025 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ-TL 166 (778)
Q Consensus 90 ~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~-~g 166 (778)
.. ..+|+||||+ ++|.+++.............+..++.||+.||.|||+ .+++||||||+||+++. +|
T Consensus 90 ~~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~Nil~~~~~~ 160 (295)
T 2clq_A 90 EN--------GFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD-NQIVHRDIKGDNVLINTYSG 160 (295)
T ss_dssp ET--------TEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEEETTTC
T ss_pred eC--------CcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHh-CCEEccCCChhhEEEECCCC
Confidence 64 3899999999 5799999875432223345566779999999999996 89999999999999987 89
Q ss_pred cEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh
Q 004025 167 DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL 246 (778)
Q Consensus 167 ~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l 246 (778)
.+||+|||++......... .....++..|+|||++.++. ..++.++|+|||||++|+|++|..||.....
T Consensus 161 ~~kl~Dfg~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~----~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 230 (295)
T 2clq_A 161 VLKISDFGTSKRLAGINPC------TETFTGTLQYMAPEIIDKGP----RGYGKAADIWSLGCTIIEMATGKPPFYELGE 230 (295)
T ss_dssp CEEECCTTTCEESCC-----------CCCCCCGGGCCHHHHHHGG----GGCSHHHHHHHHHHHHHHHHHTSCTTGGGSS
T ss_pred CEEEeecccccccCCCCCc------ccccCCCccccChhhhcCCC----CCCCcHHHHHHHHHHHHHHHHCCCCccCCCc
Confidence 9999999999876542211 11123455899999986531 1356789999999999999999998853210
Q ss_pred -----------hc----cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 -----------RN----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 -----------~~----~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. ...+|..+..++.+||..||.+||++.++++|+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~ 280 (295)
T 2clq_A 231 PQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDE 280 (295)
T ss_dssp HHHHHHHHHHHCCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSG
T ss_pred hhHHHHhhccccccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence 00 134667788999999999999999999999998
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=301.48 Aligned_cols=235 Identities=17% Similarity=0.199 Sum_probs=194.3
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..|++.+.||.|+ | +||+|+++.+++.|+||++...... ...+.+.+|+.+++.++||||+++++++..+
T Consensus 22 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 92 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFG--EVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYVTKYYGSYLKD------ 92 (303)
T ss_dssp GTEEEEEEEEECSSS--EEEEEEETTTCCEEEEEEEETTTCS-TTHHHHHHHHHHHHHCCCTTBCCEEEEEEET------
T ss_pred HHHHHhhhhcccCCe--EEEEEEECCCCcEEEEEEecccccH-HHHHHHHHHHHHHHhCCCCCEeEEEEEEecC------
Confidence 4599999999998 8 9999999999999999999875433 3466789999999999999999999999874
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+||||||+ ++|.+++.... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 93 --~~~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~Nil~~~~~~~kl~Dfg~ 165 (303)
T 3a7i_A 93 --TKLWIIMEYLGGGSALDLLEPGP----LDETQIATILREILKGLDYLHS-EKKIHRDIKAANVLLSEHGEVKLADFGV 165 (303)
T ss_dssp --TEEEEEEECCTTEEHHHHHTTSC----CCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred --CeEEEEEEeCCCCcHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHH-CCCccCCCChheEEECCCCCEEEeeccc
Confidence 3899999999 47988886533 2344566779999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh--------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~-------- 247 (778)
+........ ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 166 ~~~~~~~~~------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 233 (303)
T 3a7i_A 166 AGQLTDTQI------KRNTFVGTPFWMAPEVIKQ------SAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK 233 (303)
T ss_dssp CEECBTTBC------CBCCCCSCGGGCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH
T ss_pred ceecCcccc------ccCccCCCcCccCHHHHhc------CCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhc
Confidence 987754321 1112234558999999876 35677999999999999999999988542110
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -----~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|..+..++.+||..||.+||++.++++|+
T Consensus 234 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 234 NNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp SCCCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred CCCCCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 1135677899999999999999999999999998
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-34 Score=306.07 Aligned_cols=244 Identities=19% Similarity=0.270 Sum_probs=188.9
Q ss_pred CCCceeccCCCCCC-CceEEEEeEEC-CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC---CCCCeeeEeeeeEecc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSK-DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV---RHPNILAFLHSTEVEN 92 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k-~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L---rHPnIlk~~d~~e~e~ 92 (778)
...|++.+.||.|+ | +||+|+++ .+|+.|+||++............+.+|+.+++.| +||||+++++++....
T Consensus 10 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 10 DQQYECVAEIGEGAYG--KVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp GGTEEEEEEEEEETTE--EEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred hhceeeeeeecccccE--EEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 45799999999998 8 99999995 6789999999975432222222345666665555 8999999999987321
Q ss_pred cccCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 93 IDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
.+ ....+|+||||+ ++|.+++....... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+
T Consensus 88 ~~---~~~~~~lv~e~~~~~L~~~l~~~~~~~-~~~~~~~~~~~qi~~~l~~lH~-~gi~H~dlkp~Nili~~~~~~kl~ 162 (326)
T 1blx_A 88 TD---RETKLTLVFEHVDQDLTTYLDKVPEPG-VPTETIKDMMFQLLRGLDFLHS-HRVVHRDLKPQNILVTSSGQIKLA 162 (326)
T ss_dssp CS---SEEEEEEEEECCSCBHHHHHHHSCTTC-SCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEECTTCCEEEC
T ss_pred cC---CCceEEEEEecCCCCHHHHHHhcccCC-CCHHHHHHHHHHHHHHHHHHHH-CCceeccCCHHHeEEcCCCCEEEe
Confidence 11 145899999999 68999988754322 2344567779999999999996 899999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----h
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R 247 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~ 247 (778)
|||++....... ......++..|+|||++.+ ..++.++|+|||||++|+|++|.+||..... .
T Consensus 163 Dfg~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 229 (326)
T 1blx_A 163 DFGLARIYSFQM-------ALTSVVVTLWYRAPEVLLQ------SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLG 229 (326)
T ss_dssp SCCSCCCCCGGG-------GGCCCCCCCTTCCHHHHTT------CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred cCcccccccCCC-------CccccccccceeCHHHHhc------CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 999987664321 1112244568999999876 3577899999999999999999998853210 0
Q ss_pred -----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -----------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|..+.+++.+||..||.+||++.++++|+
T Consensus 230 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 298 (326)
T 1blx_A 230 KILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHP 298 (326)
T ss_dssp HHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred HHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCc
Confidence 0124667788999999999999999999999998
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-34 Score=305.31 Aligned_cols=243 Identities=13% Similarity=0.170 Sum_probs=193.0
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEE-----CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEe
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTS-----KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~-----k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~ 90 (778)
...+|.+++.||.|+ | +||+|++ +.++..|+||++.... .....+.+.+|+++|+.|+||||+++++++..
T Consensus 21 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 97 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFG--KVVKATAFHLKGRAGYTTVAVKMLKENA-SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ 97 (314)
T ss_dssp CGGGEEEEEEEEECSSS--EEEEEEEETGGGCSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred chhheeeeeeecccCCe--eEEEEEEeccCcccCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCceeeEEEEEec
Confidence 445799999999998 8 9999987 3456899999997543 34456778999999999999999999999976
Q ss_pred cccccCCcccEEEEEecCC--cChHHHHHHhCcC---------------------CCcchHHHHHHHHHHHHHHHHHHcC
Q 004025 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLE---------------------GSQRDEYYAWGLNQIAKAVSFLNND 147 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~---------------------~~~~~~~i~~gl~QI~~aL~fLH~~ 147 (778)
+ ..+|+||||+ ++|.+++...... .......+..++.||+.||.|||+
T Consensus 98 ~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~- 168 (314)
T 2ivs_A 98 D--------GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE- 168 (314)
T ss_dssp S--------SSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHH-
T ss_pred C--------CceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHH-
Confidence 4 3789999999 5899999875431 112344566779999999999996
Q ss_pred CCccccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHH
Q 004025 148 CKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGL 227 (778)
Q Consensus 148 ~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSL 227 (778)
.+++||||||+||+++.+|.+||+|||++......... .......++..|+|||++.+ ..++.++|+|||
T Consensus 169 ~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~sl 238 (314)
T 2ivs_A 169 MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY----VKRSQGRIPVKWMAIESLFD------HIYTTQSDVWSF 238 (314)
T ss_dssp TTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCE----ECSSCCCSCGGGCCHHHHHH------CEECHHHHHHHH
T ss_pred CCCcccccchheEEEcCCCCEEEccccccccccccccc----eeccCCCCcccccChhhhcC------CCcCchhhHHHH
Confidence 89999999999999999999999999999877543211 11111223447999999876 346679999999
Q ss_pred HHHHHHHHh-CCCCCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 228 GCLIYELFS-GMRLSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 228 G~liyel~t-g~~p~~~~~l~-------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
||++|||++ |..||...... ....+|..+.+++.+||..||.+||++.+++++-
T Consensus 239 G~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l 306 (314)
T 2ivs_A 239 GVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDL 306 (314)
T ss_dssp HHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCCCCHHHHHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 999999999 88887542211 1135678899999999999999999999998763
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-34 Score=307.44 Aligned_cols=248 Identities=10% Similarity=0.126 Sum_probs=174.9
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCC---cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEec
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGS---PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~---~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e 91 (778)
+...+|++++.||.|+ | +||+|+++.++. .|+||++..........+.+.+|+++++.++||||+++++++...
T Consensus 20 i~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 97 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFG--SVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRS 97 (323)
T ss_dssp CC---CEEEEEEEEETTE--EEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC
T ss_pred cChhHeEEeceecccCCe--EEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecc
Confidence 3456799999999998 8 999999887775 899999986544445577899999999999999999999999864
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcCC---CcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEG---SQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL 166 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~---~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g 166 (778)
...+ .....|+||||+ ++|.+++....... ......+..++.||+.||.|||+ .+++||||||+||+++.+|
T Consensus 98 ~~~~--~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~-~~ivH~Dikp~NIli~~~~ 174 (323)
T 3qup_A 98 RAKG--RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS-RNFIHRDLAARNCMLAEDM 174 (323)
T ss_dssp ---------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEECTTS
T ss_pred cccc--CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHc-CCcccCCCCcceEEEcCCC
Confidence 3110 012349999999 48999887654211 12344566779999999999996 8999999999999999999
Q ss_pred cEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhh
Q 004025 167 DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE 245 (778)
Q Consensus 167 ~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~ 245 (778)
.+||+|||++.......... ......++..|+|||++.+ ..++.++|+|||||++|+|++ |..||....
T Consensus 175 ~~kl~Dfg~a~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~ell~~g~~p~~~~~ 244 (323)
T 3qup_A 175 TVCVADFGLSRKIYSGDYYR----QGCASKLPVKWLALESLAD------NLYTVHSDVWAFGVTMWEIMTRGQTPYAGIE 244 (323)
T ss_dssp CEEECCCCC---------------------CCGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred CEEEeecccccccccccccc----ccccccCcccccCchhhcC------CCCCCccchhhHHHHHHHHHhCCCCCccccC
Confidence 99999999998765432111 0111223447999999876 357789999999999999999 888875422
Q ss_pred h-------------hccCCCCcchHHHHHHHhccCCCCCCChHHHH
Q 004025 246 L-------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLI 278 (778)
Q Consensus 246 l-------------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL 278 (778)
. .....+|..+.+++.+||..||.+||++.+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~ 290 (323)
T 3qup_A 245 NAEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLR 290 (323)
T ss_dssp GGGHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHH
T ss_pred hHHHHHHHhcCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 1 11245677899999999999999999955444
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-34 Score=304.16 Aligned_cols=246 Identities=14% Similarity=0.178 Sum_probs=189.5
Q ss_pred CCCCCCCCceeccCCCCCC-CceEEEEeE----ECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeee
Q 004025 13 GAGVKDLPYNIGDPYPSAW-GSWSHFQGT----SKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHS 87 (778)
Q Consensus 13 ~~~~~~~~Y~i~~~lg~g~-g~w~Vy~g~----~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~ 87 (778)
...+....|++.+.||.|+ | +||+|+ +..+++.|+||++... .....+.+.+|+++|+.++||||++++++
T Consensus 4 ~~~~~~~~~~~~~~lg~G~~g--~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 79 (295)
T 3ugc_A 4 PTQFEERHLKFLQQLGKGNFG--SVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGV 79 (295)
T ss_dssp --CCCGGGEEEEEEEEECSSE--EEEEEEECTTCSSCCEEEEEEEESCC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred cCcCCHHHhhhhheeeccCCE--EEEEEEEecccCCCCcEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence 3455667899999999998 8 899998 5678999999999753 33456678999999999999999999999
Q ss_pred eEecccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC
Q 004025 88 TEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT 165 (778)
Q Consensus 88 ~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~ 165 (778)
+.... ...+||||||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.+
T Consensus 80 ~~~~~------~~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~qi~~~l~~lH~-~~ivH~Dikp~Nil~~~~ 150 (295)
T 3ugc_A 80 CYSAG------RRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYLGT-KRYIHRDLATRNILVENE 150 (295)
T ss_dssp ECHHH------HTSCEEEEECCTTCBHHHHHHHCGGG--CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEEEET
T ss_pred EecCC------CCceEEEEEeCCCCCHHHHHHhcccc--cCHHHHHHHHHHHHHHHHHHhc-CCcccCCCCHhhEEEcCC
Confidence 87543 34689999999 4899999875421 2233455669999999999996 899999999999999999
Q ss_pred CcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh
Q 004025 166 LDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE 245 (778)
Q Consensus 166 g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~ 245 (778)
|.+||+|||++........... ......++..|+|||++.+ ..++.++|+|||||++|||++|..++....
T Consensus 151 ~~~kl~Dfg~~~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~~l~~g~~~~~~~~ 221 (295)
T 3ugc_A 151 NRVKIGDFGLTKVLPQDKEFFK---VKEPGESPIFWYAPESLTE------SKFSVASDVWSFGVVLYELFTYIEKSKSPP 221 (295)
T ss_dssp TEEEECCCCSCC----------------CTTCGGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHHTTCTTCSHH
T ss_pred CeEEEccCcccccccCCcceee---eccCCCCccceeCcHHhcC------CCCChHHHHHHHHHHHHHHHhcccccCCCh
Confidence 9999999999987654321100 0111123346999999876 357789999999999999999987764321
Q ss_pred h-----------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 246 L-----------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 246 l-----------------------------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. .....+|..+.+++.+||..||.+||++.++++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~ 285 (295)
T 3ugc_A 222 AEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALR 285 (295)
T ss_dssp HHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred HHHHhhhcCccccchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 0 0113567789999999999999999999999865
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=303.08 Aligned_cols=244 Identities=16% Similarity=0.158 Sum_probs=178.5
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.||.|+ | +||+|+++.+|+.|+||++......+...+.+..+...++.++||||+++++++..+
T Consensus 25 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~------ 96 (318)
T 2dyl_A 25 NDLENLGEMGSGTCG--QVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITN------ 96 (318)
T ss_dssp GGEEEEEEC--------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS------
T ss_pred ccccccceeeecCCe--eEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecC------
Confidence 4688899999998 8 899999999999999999987654444455566666778899999999999999864
Q ss_pred cccEEEEEecCCcChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 98 TKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 98 ~~~~lyIVtE~v~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
..+||||||++.+...+..... .......+..++.||+.||.|||+.++++||||||+||+++.+|.+||+|||++.
T Consensus 97 --~~~~lv~e~~~~~~~~l~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~ 173 (318)
T 2dyl_A 97 --TDVFIAMELMGTCAEKLKKRMQ-GPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISG 173 (318)
T ss_dssp --SEEEEEECCCSEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC-
T ss_pred --CcEEEEEeccCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCch
Confidence 3899999999765544443211 1223455667799999999999963499999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh-----hhh-----
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-----ELR----- 247 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~-----~l~----- 247 (778)
....... .....++..|+|||++.+.. .....++.++|+|||||++|+|++|..||... .+.
T Consensus 174 ~~~~~~~-------~~~~~~~~~y~aPE~~~~~~-~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 245 (318)
T 2dyl_A 174 RLVDDKA-------KDRSAGCAAYMAPERIDPPD-PTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQE 245 (318)
T ss_dssp --------------------CCTTCCHHHHC---------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHS
T ss_pred hccCCcc-------ccccCCCccccChhhccccc-ccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhcc
Confidence 7654211 11223456899999985311 01135678999999999999999999888541 111
Q ss_pred ------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|..+.+++.+||..||.+||++.++++|+
T Consensus 246 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~ 285 (318)
T 2dyl_A 246 EPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHS 285 (318)
T ss_dssp CCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSH
T ss_pred CCCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhCH
Confidence 0124678899999999999999999999999998
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-34 Score=313.19 Aligned_cols=231 Identities=17% Similarity=0.230 Sum_probs=186.1
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecccccC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~g~ 96 (778)
..|++.+.||.|+ | +||+|+++.+|+.|+||++.+.... ..+|+++|+++ +||||+++++++++.
T Consensus 22 ~~y~~~~~lG~G~~g--~V~~~~~~~~~~~~avK~~~~~~~~------~~~E~~~l~~~~~hp~iv~~~~~~~~~----- 88 (342)
T 2qr7_A 22 DGYEVKEDIGVGSYS--VCKRCIHKATNMEFAVKIIDKSKRD------PTEEIEILLRYGQHPNIITLKDVYDDG----- 88 (342)
T ss_dssp HHEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEEETTTCC------CHHHHHHHHHHTTSTTBCCEEEEEECS-----
T ss_pred ccEEEEEEEeeCCCE--EEEEEEECCCCCEEEEEEEEcccCC------hHHHHHHHHHhcCCCCcCeEEEEEEcC-----
Confidence 3699999999998 8 9999999999999999999865322 34678888887 799999999999864
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC-C---cEEE
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT-L---DWKL 170 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~-g---~~KL 170 (778)
..+||||||| ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||++... | .+||
T Consensus 89 ---~~~~lv~E~~~gg~L~~~i~~~~~---~~~~~~~~~~~qi~~al~~lH~-~givHrDlkp~NIl~~~~~~~~~~~kl 161 (342)
T 2qr7_A 89 ---KYVYVVTELMKGGELLDKILRQKF---FSEREASAVLFTITKTVEYLHA-QGVVHRDLKPSNILYVDESGNPESIRI 161 (342)
T ss_dssp ---SEEEEEECCCCSCBHHHHHHTCTT---CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCCGGGEEESSSSCSGGGEEE
T ss_pred ---CEEEEEEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCcEeccCCHHHEEEecCCCCcCeEEE
Confidence 4899999999 579998876542 2344566779999999999996 899999999999998543 3 4999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-----
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----- 245 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----- 245 (778)
+|||++......... .....++..|+|||++.+. .++.++|+|||||++|||++|.+||....
T Consensus 162 ~Dfg~a~~~~~~~~~------~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~ 229 (342)
T 2qr7_A 162 CDFGFAKQLRAENGL------LMTPCYTANFVAPEVLERQ------GYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPE 229 (342)
T ss_dssp CCCTTCEECBCTTCC------BCCSSCCSSCCCHHHHHHH------HHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHH
T ss_pred EECCCcccCcCCCCc------eeccCCCccccCHHHhcCC------CCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHH
Confidence 999999876543211 1122445689999998763 35578999999999999999999886311
Q ss_pred -h-hc------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 246 -L-RN------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 246 -l-~~------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+ .. ...++..+.+++++||..||.+||++.++++|+
T Consensus 230 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp 279 (342)
T 2qr7_A 230 EILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHP 279 (342)
T ss_dssp HHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSH
T ss_pred HHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCC
Confidence 1 00 134678899999999999999999999999998
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-33 Score=303.53 Aligned_cols=256 Identities=14% Similarity=0.191 Sum_probs=182.3
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEeccccc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDA 95 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~g 95 (778)
..+|++.+.||.|+ | +||+|+++.+|+.|+||++... .....+.+.+|+.++++++ ||||+++++++.......
T Consensus 27 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~ 102 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFA--FVYEAQDVGSGREYALKRLLSN--EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEES 102 (337)
T ss_dssp TEEEEEEEEEECCSSE--EEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTS
T ss_pred CceEEEEEEEccCCce--EEEEEEECCCCcEEEEEEecCC--chHHHHHHHHHHHHHHHhccCCChhhcccccccccccc
Confidence 45799999999998 8 9999999999999999998653 2344567889999999996 999999999985322111
Q ss_pred CCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCC--ccccccCCCCeEEcCCCcEEEEe
Q 004025 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCK--LVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~--ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
......+|+||||+ ++|.+++.............+..++.||+.||.|||+ .+ ++||||||+||+++.+|.+||+|
T Consensus 103 ~~~~~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~-~~~~ivH~Dikp~NIl~~~~~~~kl~D 181 (337)
T 3ll6_A 103 DTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR-QKPPIIHRDLKVENLLLSNQGTIKLCD 181 (337)
T ss_dssp TTSSEEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHT-SSSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred ccCCceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh-CCCCEEEccCCcccEEECCCCCEEEec
Confidence 11145799999999 6799988764333334455567779999999999995 78 99999999999999999999999
Q ss_pred cccccccCCCCCCCCCC------ccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh
Q 004025 173 FDVLSEFDGNNEAANGP------MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL 246 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~------~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l 246 (778)
||++............. .......++..|+|||++.... ...++.++|+|||||++|+|++|..||.....
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~---~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~ 258 (337)
T 3ll6_A 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYS---NFPIGEKQDIWALGCILYLLCFRQHPFEDGAK 258 (337)
T ss_dssp CTTCBCCSSCC-------------------------------CCT---TSCSSHHHHHHHHHHHHHHHHHSSCCC-----
T ss_pred CccceeccccCcccccccccccchhhccccCCCCcCChhhhhccc---cCCCChHHhHHHHHHHHHHHHhCCCCCcchhH
Confidence 99998776532211000 0001223455899999984210 13567799999999999999999999865332
Q ss_pred hc----------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 RN----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ~~----------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. ...++..+..++++||..||.+||++.+++++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l 303 (337)
T 3ll6_A 259 LRIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQL 303 (337)
T ss_dssp -------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred HHhhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 11 134567799999999999999999999999874
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-34 Score=316.33 Aligned_cols=240 Identities=13% Similarity=0.216 Sum_probs=189.4
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC--------CCCeeeEeee
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR--------HPNILAFLHS 87 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr--------HPnIlk~~d~ 87 (778)
...+|++.+.||.|+ | +||+|+++.+++.||||++... ....+.+.+|+++|+.++ ||||+++++.
T Consensus 35 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~ 109 (397)
T 1wak_A 35 FNGRYHVIRKLGWGHFS--TVWLSWDIQGKKFVAMKVVKSA---EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDD 109 (397)
T ss_dssp ETTTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEE
T ss_pred cCCeEEEEEEeeecCCe--eEEEEEecCCCeEEEEEEEecC---CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecc
Confidence 346799999999998 8 9999999999999999999743 334567889999999996 7889999999
Q ss_pred eEecccccCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC
Q 004025 88 TEVENIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL 166 (778)
Q Consensus 88 ~e~e~~~g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g 166 (778)
+.....+ ..++||||||+ ++|.+++....... .....+..++.||+.||.|||+.++|+||||||+||+++.+|
T Consensus 110 ~~~~~~~----~~~~~lv~e~~~~~l~~~~~~~~~~~-~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~ 184 (397)
T 1wak_A 110 FKISGVN----GTHICMVFEVLGHHLLKWIIKSNYQG-LPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNE 184 (397)
T ss_dssp EEEEETT----EEEEEEEECCCCCBHHHHHHHTTTSC-CCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCH
T ss_pred eeecCCC----CceEEEEEeccCccHHHHHHhcccCC-CCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccc
Confidence 9853222 45899999999 56777776543222 234456777999999999999734999999999999999776
Q ss_pred -------------------------------------------------cEEEEecccccccCCCCCCCCCCcccccccc
Q 004025 167 -------------------------------------------------DWKLHAFDVLSEFDGNNEAANGPMLQYAWLV 197 (778)
Q Consensus 167 -------------------------------------------------~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~ 197 (778)
.+||+|||++....... ....+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~---------~~~~g 255 (397)
T 1wak_A 185 QYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHF---------TEDIQ 255 (397)
T ss_dssp HHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCS---------CSCCS
T ss_pred hhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccC---------ccCCC
Confidence 79999999998765321 11234
Q ss_pred CCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----------hh----ccCCC-----------
Q 004025 198 GAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----------LR----NTASI----------- 252 (778)
Q Consensus 198 ~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----------l~----~~~~i----------- 252 (778)
+..|+|||++.+ ..++.++|||||||++|||++|..||.... +. ....+
T Consensus 256 t~~y~aPE~~~~------~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 329 (397)
T 1wak_A 256 TRQYRSLEVLIG------SGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYS 329 (397)
T ss_dssp CGGGCCHHHHHT------SCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTG
T ss_pred CCcccCChhhcC------CCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhccccc
Confidence 568999999886 357789999999999999999999885321 00 00111
Q ss_pred -----------------------------------CcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 253 -----------------------------------PKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 253 -----------------------------------P~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+..+.+++.+||..||.+||++.++++|+
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 393 (397)
T 1wak_A 330 KEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHP 393 (397)
T ss_dssp GGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSG
T ss_pred ccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCc
Confidence 12356889999999999999999999998
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-33 Score=307.23 Aligned_cols=242 Identities=16% Similarity=0.168 Sum_probs=190.2
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCc---EEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEec
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSP---VSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~---VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e 91 (778)
+...+|++.+.||.|+ | +||.|+++.+++. |+||++.... .+...+.+.+|+++|+.|+||||+++++++...
T Consensus 46 ~~~~~y~i~~~lG~G~~g--~V~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 122 (325)
T 3kul_A 46 IEASRIHIEKIIGSGDSG--EVCYGRLRVPGQRDVPVAIKALKAGY-TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRG 122 (325)
T ss_dssp CCGGGEEEEEEEEETTTE--EEEEEEECCTTSCCEEEEEEEECTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGG
T ss_pred cChhHeEEeeEEEeCCCc--EEEEEEEecCCCCCceEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC
Confidence 4456799999999998 8 9999999877665 9999997543 334566789999999999999999999999763
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEE
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~K 169 (778)
..+||||||+ ++|.++++.... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+|
T Consensus 123 --------~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~L~~LH~-~~ivH~Dlkp~NIll~~~~~~k 191 (325)
T 3kul_A 123 --------RLAMIVTEYMENGSLDTFLRTHDG--QFTIMQLVGMLRGVGAGMRYLSD-LGYVHRDLAARNVLVDSNLVCK 191 (325)
T ss_dssp --------GCCEEEEECCTTCBHHHHHHTTTT--CSCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECTTCCEE
T ss_pred --------CccEEEeeCCCCCcHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHH-CCeeCCCCCcceEEECCCCCEE
Confidence 4789999999 479999875432 12344566679999999999996 8999999999999999999999
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh-
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR- 247 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~- 247 (778)
|+|||++......... ........++..|+|||++.+ ..++.++|+|||||++|||++ |..||......
T Consensus 192 l~Dfg~a~~~~~~~~~---~~~~~~~~~t~~y~aPE~~~~------~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~ 262 (325)
T 3kul_A 192 VSDFGLSRVLEDDPDA---AYTTTGGKIPIRWTAPEAIAF------RTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD 262 (325)
T ss_dssp ECCCSSCEECC----C---CEECC---CCGGGSCHHHHHH------CEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH
T ss_pred ECCCCcccccccCccc---eeeccCCCCcccccCHhHhcC------CCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH
Confidence 9999999877553211 111111222347999999876 346679999999999999998 88887532111
Q ss_pred ------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 ------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 ------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+|..+.+++.+||..||.+||++.++++.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~ 307 (325)
T 3kul_A 263 VISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSV 307 (325)
T ss_dssp HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHcCCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 123567789999999999999999999998864
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-33 Score=301.12 Aligned_cols=233 Identities=18% Similarity=0.216 Sum_probs=190.1
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..|.+.+.||.|+ | +||.|+++.+|+.|+||++..... ...+.+.+|+.+++.++||||++++++++..
T Consensus 9 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 78 (304)
T 2jam_A 9 KTFIFMEVLGSGAFS--EVFLVKQRLTGKLFALKCIKKSPA--FRDSSLENEIAVLKKIKHENIVTLEDIYEST------ 78 (304)
T ss_dssp HHEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEEECS------
T ss_pred ccceeeeeccCCCCc--eEEEEEECCCCCEEEEEEEecccc--cchHHHHHHHHHHHhCCCCCeeehhhhcccC------
Confidence 4699999999998 8 999999999999999999986432 2235688999999999999999999999863
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEE---cCCCcEEEEe
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV---TQTLDWKLHA 172 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v---~~~g~~KL~d 172 (778)
..+|+||||+ ++|.+++...+. .....+..++.||+.||.|||+ .+++||||||+||++ +.++.+||+|
T Consensus 79 --~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dikp~NIl~~~~~~~~~~kl~D 152 (304)
T 2jam_A 79 --THYYLVMQLVSGGELFDRILERGV---YTEKDASLVIQQVLSAVKYLHE-NGIVHRDLKPENLLYLTPEENSKIMITD 152 (304)
T ss_dssp --SEEEEEECCCCSCBHHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHH-TTCCCCSCCGGGCEESSSSTTCCEEBCS
T ss_pred --CEEEEEEEcCCCccHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEEecCCCCCCEEEcc
Confidence 4899999999 479998876543 2344466679999999999996 899999999999999 7889999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh-----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----- 247 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~----- 247 (778)
||++...... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 153 fg~~~~~~~~--------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~ 218 (304)
T 2jam_A 153 FGLSKMEQNG--------IMSTACGTPGYVAPEVLAQ------KPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEK 218 (304)
T ss_dssp CSTTCCCCCB--------TTHHHHSCCCBCCTTTBSS------CSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH
T ss_pred CCcceecCCC--------ccccccCCCCccChHHhcc------CCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence 9998754321 0112245668999999876 35678999999999999999999988542110
Q ss_pred -----------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -----------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|..+.+++.+||..||.+||++.++++|+
T Consensus 219 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~ 263 (304)
T 2jam_A 219 IKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHP 263 (304)
T ss_dssp HHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSH
T ss_pred HHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCc
Confidence 0135678899999999999999999999999998
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-33 Score=295.81 Aligned_cols=242 Identities=12% Similarity=0.090 Sum_probs=194.2
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEeccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENI 93 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~ 93 (778)
+...+|++.+.||.|+ | +||+|+++.+|+.|+||++...... +.+.+|++.++.+ +||||++++++++..
T Consensus 7 ~~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~~~~~l~~~~~i~~~~~~~~~~-- 78 (298)
T 1csn_A 7 VVGVHYKVGRRIGEGSFG--VIFEGTNLLNNQQVAIKFEPRRSDA----PQLRDEYRTYKLLAGCTGIPNVYYFGQEG-- 78 (298)
T ss_dssp EETTTEEEEEEEEECSSC--EEEEEEETTTTEEEEEEEEECCTTS----CCHHHHHHHHHHTTTCTTCCCEEEEEEET--
T ss_pred ccccceEEEEEEeecCCE--EEEEEEECCCCcEEEEEEeccCCcc----HHHHHHHHHHHHHhcCCCCCeEEeecCCC--
Confidence 3456799999999998 8 9999999999999999999765332 2477899999999 799999999998763
Q ss_pred ccCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCc-----
Q 004025 94 DATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD----- 167 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~----- 167 (778)
...|+||||+ ++|.+++...+.. .....+..++.||+.||.|||+ .+++||||||+||+++.+|.
T Consensus 79 ------~~~~lv~e~~~~~L~~~l~~~~~~--~~~~~~~~i~~qi~~~l~~lH~-~~ivH~Dlkp~NIl~~~~~~~~~~~ 149 (298)
T 1csn_A 79 ------LHNVLVIDLLGPSLEDLLDLCGRK--FSVKTVAMAAKQMLARVQSIHE-KSLVYRDIKPDNFLIGRPNSKNANM 149 (298)
T ss_dssp ------TEEEEEEECCCCBHHHHHHHTTTC--CCHHHHHHHHHHHHHHHHHHHT-TTEECCCCCGGGEEECCSSSTTTTC
T ss_pred ------ceeEEEEEecCCCHHHHHHHhccC--CCHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEeccCCCCCCCe
Confidence 4899999999 5799999875421 2344566779999999999995 89999999999999988776
Q ss_pred EEEEecccccccCCCCCCCCCCcc-ccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-
Q 004025 168 WKLHAFDVLSEFDGNNEAANGPML-QYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE- 245 (778)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~-~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~- 245 (778)
+||+|||++............+.. .....++..|+|||++.+ ..++.++|+|||||++|||++|..||....
T Consensus 150 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 223 (298)
T 1csn_A 150 IYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLG------REQSRRDDLEALGHVFMYFLRGSLPWQGLKA 223 (298)
T ss_dssp EEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT------CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCS
T ss_pred EEEEECccccccccccccccccccCccCCCCCcccCCchhhcC------CCCChHHHHHHHHHHHHHHHcCCCCcchhhc
Confidence 999999999887654321111111 122345568999999876 356789999999999999999999986411
Q ss_pred ------hh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 246 ------LR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 246 ------l~-------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
+. ....+|..+.+++.+||..+|.+||++.++++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~ 277 (298)
T 1csn_A 224 ATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGL 277 (298)
T ss_dssp CCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHH
T ss_pred cccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 00 013688899999999999999999999988764
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-33 Score=306.05 Aligned_cols=244 Identities=16% Similarity=0.220 Sum_probs=180.0
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.||.|+ | +||+|+++.+|+.|+||++...... .....++++.++.++||||+++++++...... ..
T Consensus 23 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~-~~ 96 (360)
T 3e3p_A 23 DRFQVERMAGQGTFG--TVQLGKEKSTGMSVAIKKVIQDPRF---RNRELQIMQDLAVLHHPNIVQLQSYFYTLGER-DR 96 (360)
T ss_dssp TTEEEC------------CEEEEETTTCCEEEEEEEECCTTC---CCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS-CT
T ss_pred cceEEEEEEecCCCe--EEEEEEECCCCCEEEEEEEecCccc---cHHHHHHHHHHHhcCCCCcccHHHhhhccccc-cc
Confidence 4799999999998 8 8999999999999999998754322 22456778888999999999999999753311 01
Q ss_pred cccEEEEEecCC-cChHHHHHHh-CcCCCcchHHHHHHHHHHHHHHHHHH--cCCCccccccCCCCeEEcC-CCcEEEEe
Q 004025 98 TKITIYIVTEPV-MPLSEKIKEL-GLEGSQRDEYYAWGLNQIAKAVSFLN--NDCKLVHGNVCLSSVVVTQ-TLDWKLHA 172 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~-~~~~~~~~~~i~~gl~QI~~aL~fLH--~~~~ivH~dLkp~NI~v~~-~g~~KL~d 172 (778)
...++||||||+ +.|...+... ..........+..++.||+.||.||| + .+++||||||+||+++. +|.+||+|
T Consensus 97 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-~~ivH~Dlkp~NIll~~~~~~~kl~D 175 (360)
T 3e3p_A 97 RDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPS-VNVCHRDIKPHNVLVNEADGTLKLCD 175 (360)
T ss_dssp TCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTT-TCCBCSCCCGGGEEEETTTTEEEECC
T ss_pred cceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCC-CCeecCcCCHHHEEEeCCCCcEEEee
Confidence 134689999999 5676666542 22222334556677999999999999 6 89999999999999996 89999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----hc
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN 248 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~~ 248 (778)
||++..+..... .....++..|+|||++.+. ..++.++|+|||||++|+|++|..||..... ..
T Consensus 176 fg~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~~-----~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~ 243 (360)
T 3e3p_A 176 FGSAKKLSPSEP-------NVAYICSRYYRAPELIFGN-----QHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHE 243 (360)
T ss_dssp CTTCBCCCTTSC-------CCSTTSCGGGCCHHHHTTC-----SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred CCCceecCCCCC-------cccccCCcceeCHHHHcCC-----CCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHH
Confidence 999987754321 1122345689999998653 3467899999999999999999998854211 00
Q ss_pred c----------------------------------------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 T----------------------------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ~----------------------------------------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+ ...+..+.+++.+||..||.+||++.++++|+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 316 (360)
T 3e3p_A 244 IVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHP 316 (360)
T ss_dssp HHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSG
T ss_pred HHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCc
Confidence 0 01345688899999999999999999999998
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=301.33 Aligned_cols=243 Identities=16% Similarity=0.182 Sum_probs=188.4
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
....|++.+.||.|+ | +||+|+++.+|..|+||++..... ...+.+.+|+++++.++||||+++++++..+
T Consensus 17 ~~~~y~i~~~lg~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---- 88 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFG--KVYKAKNKETGALAAAKVIETKSE--EELEDYIVEIEILATCDHPYIVKLLGAYYHD---- 88 (302)
T ss_dssp GGGTEEEEEEEECSTTC--CEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC----
T ss_pred CccceeecceeccCCCe--EEEEEEEcCCCcEEEEEEecCCCH--HHHHHHHHHHHHHhcCCCCCEeeeeeeeeeC----
Confidence 345799999999998 8 899999999999999999976432 2356788999999999999999999999864
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..+|+||||+ ++|..++...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+||
T Consensus 89 ----~~~~lv~e~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~Nil~~~~~~~kl~Df 161 (302)
T 2j7t_A 89 ----GKLWIMIEFCPGGAVDAIMLELDRG--LTEPQIQVVCRQMLEALNFLHS-KRIIHRDLKAGNVLMTLEGDIRLADF 161 (302)
T ss_dssp -----CEEEEEECCTTEEHHHHHHHHTSC--CCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCSGGGEEECTTSCEEECCC
T ss_pred ----CeEEEEEEeCCCCcHHHHHHhhccC--CCHHHHHHHHHHHHHHHHHHhc-CCcccCCCCHHHEEECCCCCEEEEEC
Confidence 3799999999 4688888764321 2344566779999999999996 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------ 247 (778)
|++........ ......++..|+|||++..... ....++.++|+|||||++|+|++|..||......
T Consensus 162 g~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~-~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~ 234 (302)
T 2j7t_A 162 GVSAKNLKTLQ------KRDSFIGTPYWMAPEVVMCETM-KDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKI 234 (302)
T ss_dssp HHHHHHHHHHH------C-----CCGGGCCHHHHHHHHT-TSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH
T ss_pred CCCcccccccc------ccccccCChhhcCCeeeccccC-CCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHH
Confidence 98754321100 0111234558999999842100 0135678999999999999999999888642110
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ---------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|..+.+++.+||..||.+||++.++++|+
T Consensus 235 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~ 277 (302)
T 2j7t_A 235 AKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHP 277 (302)
T ss_dssp HHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTST
T ss_pred hccCCcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcCh
Confidence 0124566789999999999999999999999998
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-33 Score=298.51 Aligned_cols=235 Identities=19% Similarity=0.256 Sum_probs=191.9
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.||.|+ | +||+|+++.+++.|+||++..........+.+.+|++++++++||||+++++++...
T Consensus 22 ~~y~i~~~lg~G~~g--~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 93 (287)
T 2wei_A 22 ERYNIVCMLGKGSFG--EVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDS------ 93 (287)
T ss_dssp HHEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECS------
T ss_pred hcceeeEEEcCCCCE--EEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCC------
Confidence 4699999999998 7 999999999999999999986544444566788999999999999999999999863
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC---CcEEEEe
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT---LDWKLHA 172 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~---g~~KL~d 172 (778)
..+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+ +.+||+|
T Consensus 94 --~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~LH~-~~i~H~dl~p~NIlv~~~~~~~~~kL~D 167 (287)
T 2wei_A 94 --SSFYIVGELYTGGELFDEIIKRKR---FSEHDAARIIKQVFSGITYMHK-HNIVHRDLKPENILLESKEKDCDIKIID 167 (287)
T ss_dssp --SEEEEEECCCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEESCSSTTCCEEECS
T ss_pred --CeEEEEEEccCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeeccCCChhhEEEecCCCcccEEEec
Confidence 4899999999 478888876542 2344566779999999999996 899999999999999764 4699999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh------
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------ 246 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l------ 246 (778)
||++........ .....++..|+|||++.+ .++.++|+|||||++|+|++|..||.....
T Consensus 168 fg~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~-------~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~ 233 (287)
T 2wei_A 168 FGLSTCFQQNTK-------MKDRIGTAYYIAPEVLRG-------TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKR 233 (287)
T ss_dssp TTGGGTBCCCSS-------CSCHHHHHTTCCHHHHTT-------CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred cCcceeecCCCc-------cccccCcccccChHHhcC-------CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 999987654221 111233458999999875 356799999999999999999988753211
Q ss_pred ----------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 ----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ----------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....+|..+.+++.+||..+|.+||++.++++|+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp 278 (287)
T 2wei_A 234 VETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHP 278 (287)
T ss_dssp HHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSH
T ss_pred HHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCH
Confidence 11135677899999999999999999999999998
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-33 Score=312.80 Aligned_cols=243 Identities=18% Similarity=0.206 Sum_probs=188.1
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC--CCCeeeEeeeeEeccccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR--HPNILAFLHSTEVENIDA 95 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr--HPnIlk~~d~~e~e~~~g 95 (778)
..|++.+.||.|+ | +||+|+++. ++.|+||++..........+.+++|+.+|+.|+ ||||+++++++..+
T Consensus 56 ~~y~~~~~LG~G~fg--~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~---- 128 (390)
T 2zmd_A 56 RIYSILKQIGSGGSS--KVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD---- 128 (390)
T ss_dssp EEEEEEEEEECCSSE--EEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS----
T ss_pred CceEEEEEEccCCCe--EEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecC----
Confidence 3599999999998 8 999999875 999999999876655666778999999999997 59999999999864
Q ss_pred CCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+|||||+. ++|.+++..... .....+..++.||+.||.|||+ .+|+||||||+||+++ +|.+||+|||
T Consensus 129 ----~~~~lv~E~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~aL~~lH~-~~ivHrDlkp~NIll~-~~~~kl~DFG 199 (390)
T 2zmd_A 129 ----QYIYMVMECGNIDLNSWLKKKKS---IDPWERKSYWKNMLEAVHTIHQ-HGIVHSDLKPANFLIV-DGMLKLIDFG 199 (390)
T ss_dssp ----SEEEEEEECCSEEHHHHHHHCSS---CCHHHHHHHHHHHHHHHHHHHT-TTCCCCCCCGGGEEES-SSCEEECCCS
T ss_pred ----CEEEEEEecCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCHHHEEEE-CCeEEEEecC
Confidence 3899999966 479999987542 2233455669999999999995 8999999999999995 5899999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccc-----cccCCCCCcchhHHHHHHHHHHHhCCCCCChh-----
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWT-----AVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----- 244 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~-----~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~----- 244 (778)
++..+..... ........++..|+|||++.+... .....++.++|||||||++|||++|.+||...
T Consensus 200 ~a~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~ 275 (390)
T 2zmd_A 200 IANQMQPDTT----SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS 275 (390)
T ss_dssp SSCCC-------------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH
T ss_pred ccccccCCCc----cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHH
Confidence 9987754221 111122345668999999864100 00124678999999999999999999998642
Q ss_pred hhhc----------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 245 ELRN----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 245 ~l~~----------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.+.. ....+..+.+++.+||..||.+||++.++++|+
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp 322 (390)
T 2zmd_A 276 KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 322 (390)
T ss_dssp HHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred HHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCc
Confidence 1111 012345688999999999999999999999998
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-33 Score=315.63 Aligned_cols=233 Identities=17% Similarity=0.221 Sum_probs=188.6
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC------CCCCeeeEeeeeEec
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV------RHPNILAFLHSTEVE 91 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L------rHPnIlk~~d~~e~e 91 (778)
.+|++.+.||.|+ | +||+|+++.+++.||||++... ......+.+|+++++.| .||||+++++.+...
T Consensus 97 ~ry~~~~~LG~G~fg--~V~~a~~~~~~~~vAvK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 171 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFG--QVVKAYDHKVHQHVALKMVRNE---KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFR 171 (429)
T ss_dssp TTEEEEEEEEESSSE--EEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEET
T ss_pred CcEEEEEEcccCccE--EEEEEEECCCCcEEEEEEECCc---cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccC
Confidence 4699999999998 8 9999999999999999999753 23345677888888777 577999999999874
Q ss_pred ccccCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCc--E
Q 004025 92 NIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD--W 168 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~--~ 168 (778)
..+||||||+ ++|.+++....... .....+..++.||+.||.|||+ .+|+||||||+||+++.+|. +
T Consensus 172 --------~~~~lv~e~~~~~L~~~l~~~~~~~-~~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlKp~NILl~~~~~~~v 241 (429)
T 3kvw_A 172 --------NHICMTFELLSMNLYELIKKNKFQG-FSLPLVRKFAHSILQCLDALHK-NRIIHCDLKPENILLKQQGRSGI 241 (429)
T ss_dssp --------TEEEEEECCCCCBHHHHHHHTTTCC-CCHHHHHHHHHHHHHHHHHHHH-HTEECSCCSGGGEEESSTTSCCE
T ss_pred --------CeEEEEEeccCCCHHHHHHhccCCC-CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEEccCCCcce
Confidence 4899999999 67999988765432 2344566779999999999996 89999999999999999988 9
Q ss_pred EEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh-
Q 004025 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR- 247 (778)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~- 247 (778)
||+|||++...... .....++..|+|||++.+ ..++.++|||||||++|||++|.+||......
T Consensus 242 kL~DFG~a~~~~~~---------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~ 306 (429)
T 3kvw_A 242 KVIDFGSSCYEHQR---------VYTYIQSRFYRAPEVILG------ARYGMPIDMWSLGCILAELLTGYPLLPGEDEGD 306 (429)
T ss_dssp EECCCTTCEETTCC---------CCSSCSCGGGCCHHHHHT------BCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred EEeecccceecCCc---------ccccCCCCCccChHHHhC------CCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHH
Confidence 99999998765432 112244568999999886 35788999999999999999999888532110
Q ss_pred ---cc-------------------------------------------------------------------CCCCcchH
Q 004025 248 ---NT-------------------------------------------------------------------ASIPKSLL 257 (778)
Q Consensus 248 ---~~-------------------------------------------------------------------~~iP~~L~ 257 (778)
.+ ...+..+.
T Consensus 307 ~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 386 (429)
T 3kvw_A 307 QLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFL 386 (429)
T ss_dssp HHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHH
T ss_pred HHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHH
Confidence 00 01134578
Q ss_pred HHHHHHhccCCCCCCChHHHHhcc
Q 004025 258 PDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 258 ~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+++++||..||.+|||+.++|+|+
T Consensus 387 dli~~~L~~dP~~Rpta~e~L~Hp 410 (429)
T 3kvw_A 387 DFLKQCLEWDPAVRMTPGQALRHP 410 (429)
T ss_dssp HHHHHHTCSSTTTSCCHHHHHTST
T ss_pred HHHHHHCCCChhhCCCHHHHhCCh
Confidence 999999999999999999999998
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-34 Score=310.59 Aligned_cols=244 Identities=16% Similarity=0.191 Sum_probs=192.4
Q ss_pred CCCCceeccCCCCCC-CceEEEEeE-----ECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeE
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGT-----SKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTE 89 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~-----~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e 89 (778)
...+|++++.||.|+ | +||+|+ ++.+++.|+||++.... .....+.+.+|+++|++| +||||+++++++.
T Consensus 20 ~~~~y~~~~~lG~G~~g--~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~ 96 (359)
T 3vhe_A 20 PRDRLKLGKPLGRGAFG--QVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACT 96 (359)
T ss_dssp CGGGEEEEEEEEECSSE--EEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cccceeeceeecCCCCc--eEEEEEeccccccccceEEEEEEecCcC-CHHHHHHHHHHHHHHHhhcCCcceeeeeeeee
Confidence 456799999999998 8 999998 56677899999997543 334466789999999999 7999999999987
Q ss_pred ecccccCCcccEEEEEecCC--cChHHHHHHhCcC---------------------------------------------
Q 004025 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLE--------------------------------------------- 122 (778)
Q Consensus 90 ~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~--------------------------------------------- 122 (778)
... ..+||||||| ++|.+++......
T Consensus 97 ~~~-------~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (359)
T 3vhe_A 97 KPG-------GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVE 169 (359)
T ss_dssp STT-------SCCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------
T ss_pred cCC-------CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccc
Confidence 642 3689999999 4899999765320
Q ss_pred ------------------CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCCCCC
Q 004025 123 ------------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNE 184 (778)
Q Consensus 123 ------------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~ 184 (778)
.......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++..+.....
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~-~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 170 EKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS-RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp --------------CTTTTCBCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred ccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHH-CCcccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 002334466679999999999996 8999999999999999999999999999987644221
Q ss_pred CCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh--------------cc
Q 004025 185 AANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR--------------NT 249 (778)
Q Consensus 185 ~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~--------------~~ 249 (778)
. .......++..|+|||++.+ ..++.++|+|||||++|||++ |..||...... ..
T Consensus 249 ~----~~~~~~~~t~~y~aPE~~~~------~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 318 (359)
T 3vhe_A 249 Y----VRKGDARLPLKWMAPETIFD------RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 318 (359)
T ss_dssp C----EEC--CEECGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCC
T ss_pred c----hhccccCCCceeEChhhhcC------CCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCC
Confidence 1 11112233457999999876 357789999999999999998 88888542210 11
Q ss_pred CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 250 ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 250 ~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
..++..+.+++.+||..||.+||++.+++++-
T Consensus 319 ~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L 350 (359)
T 3vhe_A 319 DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 350 (359)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHccCChhhCCCHHHHHHHH
Confidence 34667899999999999999999999999874
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-33 Score=301.69 Aligned_cols=249 Identities=16% Similarity=0.220 Sum_probs=189.1
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENID 94 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~ 94 (778)
....|++.+.||.|+ | +||+|+++.+|+.|+||++...... .+.+.+|++.++++ +||||+++++++......
T Consensus 22 ~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 96 (326)
T 2x7f_A 22 PAGIFELVELVGNGTYG--QVYKGRHVKTGQLAAIKVMDVTGDE---EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 96 (326)
T ss_dssp CTTTEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEECCSST---THHHHHHHHHHHHHCCSTTBCCEEEEEEECC--
T ss_pred CCCcEEEEEEeccCCCE--EEEEEEECCCCCeEEEEEEecCccc---HHHHHHHHHHHHhccCCCCeeeeeeEEeeccCc
Confidence 345799999999998 7 9999999999999999999865332 34678999999999 799999999999864311
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
+....+||||||+ ++|.+++...... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 97 --~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~dlkp~NIl~~~~~~~kl~D 172 (326)
T 2x7f_A 97 --GMDDQLWLVMEFCGAGSVTDLIKNTKGN-TLKEEWIAYICREILRGLSHLHQ-HKVIHRDIKGQNVLLTENAEVKLVD 172 (326)
T ss_dssp --CCCCEEEEEEECCTTEEHHHHHHHSGGG-CCCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCSGGGEEECTTCCEEECC
T ss_pred --cccceEEEEEEcCCCCcHHHHHHhcccC-CCCHHHHHHHHHHHHHHHHHHHH-CCccccCCcHHHEEEcCCCCEEEee
Confidence 0124899999999 3799999874321 12344566779999999999996 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----h-
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R- 247 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~- 247 (778)
||++......... .....++..|+|||++..... ....++.++|+|||||++|+|++|..||..... .
T Consensus 173 fg~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~-~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~ 245 (326)
T 2x7f_A 173 FGVSAQLDRTVGR------RNTFIGTPYWMAPEVIACDEN-PDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFL 245 (326)
T ss_dssp CTTTC-------------------CCGGGCCHHHHC---------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH
T ss_pred CcCceecCcCccc------cccccCCccccChhhhccccc-cCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHH
Confidence 9998876532110 112234558999999863210 013567899999999999999999988854211 0
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ---------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|..+.+++.+||..||.+||++.++++|+
T Consensus 246 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp 288 (326)
T 2x7f_A 246 IPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHP 288 (326)
T ss_dssp HHHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSH
T ss_pred hhcCccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhhCh
Confidence 0134678899999999999999999999999998
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-33 Score=298.12 Aligned_cols=240 Identities=15% Similarity=0.173 Sum_probs=180.0
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCC---CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEec
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDG---SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g---~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e 91 (778)
+...+|++++.||.|+ | +||+|+++.++ ..|+||++... ..+...+.+.+|+..+++++||||+++++++..
T Consensus 12 ~~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~- 87 (281)
T 1mp8_A 12 IQRERIELGRCIGEGQFG--DVHQGIYMSPENPALAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVITE- 87 (281)
T ss_dssp CCGGGEEEEEEEEECSSS--EEEEEEECCC--CCEEEEEEECTTT-TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-
T ss_pred EehHHeEEEeEeeecCCe--eEEEEEEecCCCCceEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCccceEEEEEcc-
Confidence 3455799999999998 8 99999987654 45999998754 234456778999999999999999999999853
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEE
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~K 169 (778)
..+||||||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+|
T Consensus 88 --------~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nil~~~~~~~k 156 (281)
T 1mp8_A 88 --------NPVWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYLES-KRFVHRDIAARNVLVSSNDCVK 156 (281)
T ss_dssp --------SSCEEEEECCTTEEHHHHHHHTTTT--SCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEEEETTEEE
T ss_pred --------CccEEEEecCCCCCHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHh-CCeecccccHHHEEECCCCCEE
Confidence 2689999999 4799999865421 2344466679999999999996 8999999999999999999999
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh-
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR- 247 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~- 247 (778)
|+|||++......... ......++..|+|||++.+ ..++.++|+|||||++|||++ |..||......
T Consensus 157 l~Dfg~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~ 225 (281)
T 1mp8_A 157 LGDFGLSRYMEDSTYY-----KASKGKLPIKWMAPESINF------RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 225 (281)
T ss_dssp ECC------------------------CCGGGCCHHHHHH------CCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG
T ss_pred ECccccccccCccccc-----ccccCCCcccccChhhccc------CCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH
Confidence 9999999876542110 1111223347999999875 356789999999999999996 88887532111
Q ss_pred ------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|..+.+++.+||..||.+||++.+++++-
T Consensus 226 ~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l 271 (281)
T 1mp8_A 226 VIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 271 (281)
T ss_dssp HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 1135677899999999999999999999998753
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-33 Score=299.30 Aligned_cols=238 Identities=15% Similarity=0.166 Sum_probs=185.7
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
-.+|++.+.||.|+ | +||+|+++.+++.|+||++...... ....+.+.+|+.+++.++||||++++++++.+
T Consensus 33 ~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~---- 106 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMG--DVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEID---- 106 (309)
T ss_dssp -CCEEEEEEEEECSSS--EEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEET----
T ss_pred eccEEEEEEEcCCCCe--eEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeC----
Confidence 35799999999998 8 9999999999999999999764332 24457789999999999999999999999874
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+||
T Consensus 107 ----~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~lH~-~~i~H~dlkp~NIl~~~~~~~kl~Df 178 (309)
T 2h34_A 107 ----GQLYVDMRLINGVDLAAMLRRQGP---LAPPRAVAIVRQIGSALDAAHA-AGATHRDVKPENILVSADDFAYLVDF 178 (309)
T ss_dssp ----TEEEEEEECCCCEEHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEECTTSCEEECSC
T ss_pred ----CeEEEEEEecCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CcCCcCCCChHHEEEcCCCCEEEecC
Confidence 3899999999 479999987642 2344566779999999999996 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------ 247 (778)
|++......... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 179 g~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~ 247 (309)
T 2h34_A 179 GIASATTDEKLT-----QLGNTVGTLYYMAPERFSE------SHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHI 247 (309)
T ss_dssp CC---------------------CCGGGCCGGGTCC----------CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHH
T ss_pred ccCccccccccc-----cccccCCCcCccCHHHHcC------CCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHh
Confidence 998776542110 0112234558999999876 35677999999999999999999998643221
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCC-ChHHHHhc
Q 004025 248 ---------NTASIPKSLLPDYQRLLSSMPSRRL-NSSKLIEN 280 (778)
Q Consensus 248 ---------~~~~iP~~L~~~i~~lL~~dP~~Rp-s~~~lL~~ 280 (778)
....+|..+.+++.+||..||.+|| ++.++++.
T Consensus 248 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~ 290 (309)
T 2h34_A 248 NQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAA 290 (309)
T ss_dssp HSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHH
T ss_pred ccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHH
Confidence 1245788899999999999999999 78887754
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=315.11 Aligned_cols=241 Identities=17% Similarity=0.269 Sum_probs=187.3
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
....|++.+.||.|+ | +||+|+++.++. |+||++..... ...+|+++|+.|+||||+++++++......
T Consensus 38 ~~~~Y~~~~~lG~G~~g--~V~~a~~~~~~~-~aikk~~~~~~------~~~~E~~il~~l~h~niv~l~~~~~~~~~~- 107 (394)
T 4e7w_A 38 REIAYTNCKVIGNGSFG--VVFQAKLVESDE-VAIKKVLQDKR------FKNRELQIMRIVKHPNVVDLKAFFYSNGDK- 107 (394)
T ss_dssp EEEEEEEEEEEEEETTE--EEEEEEETTTEE-EEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEESSS-
T ss_pred ccceEEEeEEEeeCCCe--EEEEEEECCCCe-EEEEEEecCcc------hHHHHHHHHHhCCCCCcceEEEEEEecCCC-
Confidence 345799999999998 8 999999987666 88888865322 123689999999999999999999754311
Q ss_pred CCcccEEEEEecCC-cChHHHHHHhC-cCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEc-CCCcEEEEe
Q 004025 96 TSTKITIYIVTEPV-MPLSEKIKELG-LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT-QTLDWKLHA 172 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~~L~~~L~~~~-~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~-~~g~~KL~d 172 (778)
....++||||||| +.|...+.... .........++.+++||+.||.|||+ .+++||||||+||+|+ .+|.+||+|
T Consensus 108 -~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivHrDlkp~Nill~~~~~~~kL~D 185 (394)
T 4e7w_A 108 -KDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS-IGICHRDIKPQNLLLDPPSGVLKLID 185 (394)
T ss_dssp -SSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEEETTTTEEEECC
T ss_pred -CCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH-CCccCCCCCHHHEEEcCCCCcEEEee
Confidence 1145689999999 45655554321 22223345567779999999999996 8999999999999999 899999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hhc
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRN 248 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~~ 248 (778)
||+++....... .....++..|+|||++.+. ..++.++|+|||||++|||++|.+||.... +..
T Consensus 186 FG~a~~~~~~~~-------~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~ 253 (394)
T 4e7w_A 186 FGSAKILIAGEP-------NVSYICSRYYRAPELIFGA-----TNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVE 253 (394)
T ss_dssp CTTCEECCTTCC-------CCSSCSCGGGCCHHHHTTC-----SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred CCCcccccCCCC-------CcccccCcCccCHHHHcCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 999987654221 1123455689999998753 357889999999999999999999986421 100
Q ss_pred -------------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -------------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++.+||..||.+||++.++++|+
T Consensus 254 i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 323 (394)
T 4e7w_A 254 IIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHP 323 (394)
T ss_dssp HHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSG
T ss_pred HHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcCh
Confidence 012667889999999999999999999999998
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-33 Score=293.80 Aligned_cols=237 Identities=16% Similarity=0.146 Sum_probs=188.3
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhH-----HHHHHHHHHHHhcCCCCCeeeEeeeeE
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGH-----LAAARNGVKRLRTVRHPNILAFLHSTE 89 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~-----~~~~~~ev~~Lk~LrHPnIlk~~d~~e 89 (778)
+...+|++.+.||.|+ | +||+|+++.+++.|+||++......... .+.+.+|+++++.++||||++++++++
T Consensus 16 ~~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 93 (287)
T 4f0f_A 16 LADNEIEYEKQIGKGGFG--LVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH 93 (287)
T ss_dssp CCSTTEEEEEECCCCSSS--CEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEET
T ss_pred hhhccceehhccccCCce--eEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeec
Confidence 4566899999999998 8 8999999999999999999765433211 267889999999999999999999986
Q ss_pred ecccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCC--ccccccCCCCeEEcCC
Q 004025 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCK--LVHGNVCLSSVVVTQT 165 (778)
Q Consensus 90 ~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~--ivH~dLkp~NI~v~~~ 165 (778)
+. .|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+ ++||||||+||+++.+
T Consensus 94 ~~----------~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~lH~-~~~~ivH~dikp~Nil~~~~ 160 (287)
T 4f0f_A 94 NP----------PRMVMEFVPCGDLYHRLLDKAH--PIKWSVKLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNIFLQSL 160 (287)
T ss_dssp TT----------TEEEEECCTTCBHHHHHHCTTS--CCCHHHHHHHHHHHHHHHHHHHT-SSSCCBCSCCSGGGEEESCC
T ss_pred CC----------CeEEEEecCCCCHHHHHhcccC--CccHHHHHHHHHHHHHHHHHHHh-CCCCeecCCCCcceEEEecc
Confidence 52 27999999 579888865432 12344456679999999999995 88 9999999999999988
Q ss_pred Cc-----EEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCC
Q 004025 166 LD-----WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL 240 (778)
Q Consensus 166 g~-----~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p 240 (778)
+. +||+|||++...... .....++..|+|||++.+.. ..++.++|+|||||++|+|++|..|
T Consensus 161 ~~~~~~~~kl~Dfg~~~~~~~~---------~~~~~g~~~y~aPE~~~~~~----~~~~~~~Di~slG~~l~~l~~g~~p 227 (287)
T 4f0f_A 161 DENAPVCAKVADFGLSQQSVHS---------VSGLLGNFQWMAPETIGAEE----ESYTEKADTYSFAMILYTILTGEGP 227 (287)
T ss_dssp CTTCSCCEEECCCTTCBCCSSC---------EECCCCCCTTSCGGGSSCSS----CEECHHHHHHHHHHHHHHHHHSSCT
T ss_pred CCCCceeEEeCCCCcccccccc---------ccccCCCccccCchhhccCC----CCcCchhhHHHHHHHHHHHHcCCCC
Confidence 87 999999998754431 11234556899999984321 2456789999999999999999998
Q ss_pred CChhhhh----------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 241 SKTEELR----------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 241 ~~~~~l~----------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
|...... ....+|..+.+++.+||..||.+||++.++++.
T Consensus 228 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 283 (287)
T 4f0f_A 228 FDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKE 283 (287)
T ss_dssp TTTCCCCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CccccccHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 8532110 013567779999999999999999999999864
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=306.75 Aligned_cols=243 Identities=15% Similarity=0.155 Sum_probs=191.7
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEEC-----CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEe
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSK-----DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k-----~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~ 90 (778)
...+|++.+.||.|+ | +||+|+++ .+++.|+||++.... .....+.+.+|+++++.++||||+++++++..
T Consensus 45 ~~~~~~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 121 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFG--RVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDNPNIVKLLGVCAV 121 (343)
T ss_dssp CGGGCEEEEEEEECSSC--EEEEEEEETSSTTSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred cHHHCeeeeeeeecCCe--eEEEEEecCcCCCCCceeEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence 445799999999998 8 99999987 345899999997643 33456778999999999999999999999976
Q ss_pred cccccCCcccEEEEEecCC--cChHHHHHHhCcC---------------------CCcchHHHHHHHHHHHHHHHHHHcC
Q 004025 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLE---------------------GSQRDEYYAWGLNQIAKAVSFLNND 147 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~---------------------~~~~~~~i~~gl~QI~~aL~fLH~~ 147 (778)
+ ..+||||||+ ++|.+++...... .......+..++.||+.||.|||+
T Consensus 122 ~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~- 192 (343)
T 1luf_A 122 G--------KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE- 192 (343)
T ss_dssp S--------SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH-
T ss_pred C--------CceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh-
Confidence 3 3789999999 4899999874311 122344466679999999999996
Q ss_pred CCccccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHH
Q 004025 148 CKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGL 227 (778)
Q Consensus 148 ~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSL 227 (778)
.+++||||||+||+++.+|.+||+|||++.......... ......++..|+|||++.+ ..++.++|+|||
T Consensus 193 ~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~----~~~~~~~t~~y~aPE~~~~------~~~~~~~Di~sl 262 (343)
T 1luf_A 193 RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK----ADGNDAIPIRWMPPESIFY------NRYTTESDVWAY 262 (343)
T ss_dssp TTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC--------CCBCGGGCCHHHHHH------CCCCHHHHHHHH
T ss_pred CCeecCCCCcceEEECCCCeEEEeecCCCcccccCcccc----ccCCCcccceecChhhhcc------CCcCcccccHHH
Confidence 899999999999999999999999999998764321100 0111233457999999876 357789999999
Q ss_pred HHHHHHHHh-CCCCCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 228 GCLIYELFS-GMRLSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 228 G~liyel~t-g~~p~~~~~l~-------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
||++|||++ |..||...... ....+|..+.+++++||..+|.+||++.+++++-
T Consensus 263 G~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L 330 (343)
T 1luf_A 263 GVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRIL 330 (343)
T ss_dssp HHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHHHHHhcCCCcCCCCChHHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHH
Confidence 999999998 88787542111 1135677899999999999999999999998753
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-33 Score=318.25 Aligned_cols=238 Identities=17% Similarity=0.208 Sum_probs=183.4
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc------hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEec
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ------DGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~------~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e 91 (778)
..|.+.+.||.|+ | +||+|+++.+++.||||++.+.... ......+.+|+++|++|+||||++++++++.+
T Consensus 135 ~~y~~~~~LG~G~~g--~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~ 212 (419)
T 3i6u_A 135 DEYIMSKTLGSGACG--EVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 212 (419)
T ss_dssp TTEEEEEEEEECSSS--EEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESS
T ss_pred ccEEEEeEEeeCCCe--EEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence 4699999999998 8 9999999999999999999864211 12233478999999999999999999998642
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCc--
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD-- 167 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~-- 167 (778)
.+||||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.++.
T Consensus 213 ---------~~~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~LH~-~~ivHrDlkp~NIll~~~~~~~ 279 (419)
T 3i6u_A 213 ---------DYYIVLELMEGGELFDKVVGNKR---LKEATCKLYFYQMLLAVQYLHE-NGIIHRDLKPENVLLSSQEEDC 279 (419)
T ss_dssp ---------EEEEEEECCTTCBGGGGTSSSCC---CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEESSSSSSC
T ss_pred ---------ceEEEEEcCCCCcHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHH-CCccccCCChHhEEEecCCCcc
Confidence 689999999 478777654332 2344566679999999999996 89999999999999976554
Q ss_pred -EEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-
Q 004025 168 -WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE- 245 (778)
Q Consensus 168 -~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~- 245 (778)
+||+|||++........ .....++..|+|||++.+.. ...++.++|+|||||++|+|++|.+||....
T Consensus 280 ~~kl~DFG~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~---~~~~~~~~DiwslG~il~~lltg~~pf~~~~~ 349 (419)
T 3i6u_A 280 LIKITDFGHSKILGETSL-------MRTLCGTPTYLAPEVLVSVG---TAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 349 (419)
T ss_dssp CEEECCSSTTTSCC------------------CTTCCTTTTC-------CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSS
T ss_pred eEEEeecccceecCCCcc-------ccccCCCCCccCceeeecCC---CCCCCchhhhHhHHHHHHHHHHCCCCCCCCcc
Confidence 99999999987654211 11234566999999985310 1345679999999999999999999885321
Q ss_pred -------hh---------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 246 -------LR---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 246 -------l~---------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+. ....++..+.+++++||..||.+||++.++++|+
T Consensus 350 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp 401 (419)
T 3i6u_A 350 QVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHP 401 (419)
T ss_dssp SCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred hHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCc
Confidence 11 0135678899999999999999999999999998
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-33 Score=295.62 Aligned_cols=238 Identities=13% Similarity=0.128 Sum_probs=189.6
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
+...+|++.+.||.|+ | +||+|+++ +++.|+||++...... .+.+.+|++++++++||||++++++++++
T Consensus 7 i~~~~y~~~~~lg~G~~g--~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--- 77 (269)
T 4hcu_A 7 IDPSELTFVQEIGSGQFG--LVHLGYWL-NKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCLEQ--- 77 (269)
T ss_dssp CCGGGEEEEEEEEECSSC--EEEEEEET-TTEEEEEEEECTTSBC---HHHHHHHHHHHHTCCCTTBCCEEEEECSS---
T ss_pred eChhhceeeheecCCCcc--EEEEEEec-CCCeEEEEEecccccC---HHHHHHHHHHHHhCCCCCEeeEEEEEecC---
Confidence 3446799999999998 8 99999987 5778999999865433 34688999999999999999999999864
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 78 -----~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~lH~-~~i~H~dikp~Nil~~~~~~~kl~D 149 (269)
T 4hcu_A 78 -----APICLVFEFMEHGCLSDYLRTQRG--LFAAETLLGMCLDVCEGMAYLEE-ACVIHRDLAARNCLVGENQVIKVSD 149 (269)
T ss_dssp -----SSEEEEEECCTTCBHHHHHHTTTT--CCCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEECGGGCEEECC
T ss_pred -----CceEEEEEeCCCCcHHHHHHhcCc--ccCHHHHHHHHHHHHHHHHHHHh-CCeecCCcchheEEEcCCCCEEecc
Confidence 3799999999 479999876432 12344466679999999999996 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhhc---
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELRN--- 248 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~~--- 248 (778)
||++.......... .....++..|+|||++.+ ..++.++|+|||||++|+|++ |..||.......
T Consensus 150 fg~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~ 218 (269)
T 4hcu_A 150 FGMTRFVLDDQYTS-----STGTKFPVKWASPEVFSF------SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE 218 (269)
T ss_dssp TTGGGGBCCHHHHS-----TTSTTCCGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH
T ss_pred cccccccccccccc-----ccCcccccccCCHHHhcC------CCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Confidence 99998765421100 111122347999999876 357789999999999999999 888876432111
Q ss_pred ----------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ----------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++.+||..+|.+||++.+++++-
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l 261 (269)
T 4hcu_A 219 DISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQL 261 (269)
T ss_dssp HHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHhcCccCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHH
Confidence 123567789999999999999999999999864
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=305.83 Aligned_cols=237 Identities=15% Similarity=0.136 Sum_probs=189.1
Q ss_pred Cceec-cCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecccccC
Q 004025 20 PYNIG-DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 20 ~Y~i~-~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~g~ 96 (778)
.|.+. +.||.|+ | +||+|+++.+|+.|+||++............+.+|+.+++.++ ||||++++++++..
T Consensus 29 ~y~~~~~~lG~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~----- 101 (327)
T 3lm5_A 29 FYILTSKELGRGKFA--VVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENT----- 101 (327)
T ss_dssp HEEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECS-----
T ss_pred EEeeccceeCCCCCe--EEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeC-----
Confidence 47776 7899998 8 9999999999999999999875444444667889999999995 69999999999863
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC---CCcEEEE
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ---TLDWKLH 171 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~---~g~~KL~ 171 (778)
..+|+||||| ++|.+++..... .......+..++.||+.||.|||+ .+++||||||+||+++. +|.+||+
T Consensus 102 ---~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~i~~ql~~~L~~LH~-~givH~Dikp~NIl~~~~~~~~~~kL~ 176 (327)
T 3lm5_A 102 ---SEIILILEYAAGGEIFSLCLPELA-EMVSENDVIRLIKQILEGVYYLHQ-NNIVHLDLKPQNILLSSIYPLGDIKIV 176 (327)
T ss_dssp ---SEEEEEEECCTTEEGGGGGSSCC--CCCCHHHHHHHHHHHHHHHHHHHH-TTEECSCCCGGGEEESCBTTBCCEEEC
T ss_pred ---CeEEEEEEecCCCcHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHH-CCeecCcCChHHEEEecCCCCCcEEEe
Confidence 4899999999 468877744221 123344566779999999999996 89999999999999997 7999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh----
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---- 247 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~---- 247 (778)
|||++........ .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 177 Dfg~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~ 243 (327)
T 3lm5_A 177 DFGMSRKIGHACE-------LREIMGTPEYLAPEILNY------DPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYL 243 (327)
T ss_dssp CGGGCEEC----------------CCCGGGCCHHHHTT------CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred eCccccccCCccc-------cccccCCcCccCCeeecC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHH
Confidence 9999987754211 112245568999999876 35778999999999999999999988542211
Q ss_pred ------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++++||..||.+||++.++++|+
T Consensus 244 ~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~ 289 (327)
T 3lm5_A 244 NISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHS 289 (327)
T ss_dssp HHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCG
T ss_pred HHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCH
Confidence 1135677789999999999999999999999998
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-33 Score=303.56 Aligned_cols=241 Identities=15% Similarity=0.159 Sum_probs=187.9
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCc----EEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEe
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSP----VSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~----VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~ 90 (778)
+...+|++.+.||.|+ | +||+|+++.+++. |++|.+...... .....+.+|+.+++.++||||++++++++.
T Consensus 10 ~~~~~y~~~~~lG~G~~g--~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 86 (325)
T 3kex_A 10 FKETELRKLKVLGSGVFG--TVHKGVWIPEGESIKIPVCIKVIEDKSGR-QSFQAVTDHMLAIGSLDHAHIVRLLGLCPG 86 (325)
T ss_dssp CCTTTEEEEEEEECCSSC--EEEEEEECCTTCSCCEEEEEEEECCTTSC-SCBCSCCHHHHHHHTCCCTTBCCEEEEECB
T ss_pred cCHhHceeeeeeeecCCc--eEEEEEEcCCCceEEEEEEEEeccccccH-HHHHHHHHHHHHHhcCCCCCcCeEEEEEcC
Confidence 3566899999999998 8 9999999988887 777777543222 223456789999999999999999998863
Q ss_pred cccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcE
Q 004025 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDW 168 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~ 168 (778)
..+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+
T Consensus 87 ---------~~~~~v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~-~~ivH~Dikp~Nil~~~~~~~ 154 (325)
T 3kex_A 87 ---------SSLQLVTQYLPLGSLLDHVRQHRG--ALGPQLLLNWGVQIAKGMYYLEE-HGMVHRNLAARNVLLKSPSQV 154 (325)
T ss_dssp ---------SSEEEEEECCTTCBSHHHHHSSGG--GSCTTHHHHHHHHHHHHHHHHHH-TTCCCSCCSSTTEEESSSSCE
T ss_pred ---------CccEEEEEeCCCCCHHHHHHHccc--cCCHHHHHHHHHHHHHHHHHHHh-CCCCCCccchheEEECCCCeE
Confidence 2689999999 579998876421 11223355669999999999996 899999999999999999999
Q ss_pred EEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh
Q 004025 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR 247 (778)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~ 247 (778)
||+|||+++.+....... ......++..|+|||++.+ ..++.++|+|||||++|+|++ |..||......
T Consensus 155 kl~Dfg~a~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~ 224 (325)
T 3kex_A 155 QVADFGVADLLPPDDKQL----LYSEAKTPIKWMALESIHF------GKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA 224 (325)
T ss_dssp EECSCSGGGGSCCCTTCC----C-----CCTTTSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT
T ss_pred EECCCCcccccCcccccc----cccCCCCcccccChHHhcc------CCCChhhHhHHhHHHHHHHHhCCCCCccccCHH
Confidence 999999998875532111 1112233448999999876 357789999999999999999 98888643211
Q ss_pred -------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|..+..++.+||..||.+||++.+++++-
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l 271 (325)
T 3kex_A 225 EVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEF 271 (325)
T ss_dssp HHHHHHHTTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 1134677899999999999999999999998864
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-33 Score=301.56 Aligned_cols=245 Identities=17% Similarity=0.150 Sum_probs=174.9
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHH-HHhcCCCCCeeeEeeeeEeccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVK-RLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~-~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
+...+|++.+.||.|+ | +||+|+++.+|+.|+||++........ ...+.+|+. .++.++||||+++++++..+
T Consensus 19 ~~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~~e~~~~~~~~~h~niv~~~~~~~~~-- 93 (327)
T 3aln_A 19 FTAEDLKDLGEIGRGAYG--SVNKMVHKPSGQIMAVKRIRSTVDEKE-QKQLLMDLDVVMRSSDCPYIVQFYGALFRE-- 93 (327)
T ss_dssp CCSCSEEC-CEEEECSSE--EEEEEEETTTTEEEEEEEEECCCCHHH-HHHHHHHHHHHHSSCCCTTBCCEEEEEECS--
T ss_pred cCHHHhhehheeccCCCE--EEEEEEEcCCCCEEEEEEeecccCchH-HHHHHHHHHHHHHcCCCCcEeeeeeEEEeC--
Confidence 3456799999999998 8 999999999999999999986543333 334445554 78888999999999999864
Q ss_pred ccCCcccEEEEEecCC-cChHHHHHHhC--cCCCcchHHHHHHHHHHHHHHHHHHcCC-CccccccCCCCeEEcCCCcEE
Q 004025 94 DATSTKITIYIVTEPV-MPLSEKIKELG--LEGSQRDEYYAWGLNQIAKAVSFLNNDC-KLVHGNVCLSSVVVTQTLDWK 169 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v-~~L~~~L~~~~--~~~~~~~~~i~~gl~QI~~aL~fLH~~~-~ivH~dLkp~NI~v~~~g~~K 169 (778)
..+||||||+ ++|.+++.... .........+..++.||+.||.|||+ . +++||||||+||+++.+|.+|
T Consensus 94 ------~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~-~~~ivH~dlkp~NIll~~~~~~k 166 (327)
T 3aln_A 94 ------GDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE-NLKIIHRDIKPSNILLDRSGNIK 166 (327)
T ss_dssp ------SEEEEEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH-HHSCCCSCCCGGGEEEETTTEEE
T ss_pred ------CceEEEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhc-cCCEeECCCCHHHEEEcCCCCEE
Confidence 3899999999 56877776421 12223445566779999999999996 6 999999999999999999999
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE---- 245 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~---- 245 (778)
|+|||++........ .....++..|+|||++..... ...++.++|+|||||++|+|++|..||....
T Consensus 167 l~Dfg~~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~--~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~ 237 (327)
T 3aln_A 167 LCDFGISGQLVDSIA-------KTRDAGCRPYMAPERIDPSAS--RQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD 237 (327)
T ss_dssp ECCCSSSCC---------------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----
T ss_pred EccCCCceecccccc-------cccCCCCccccCceeeccccC--cCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH
Confidence 999999987654211 111234568999999843110 1356789999999999999999998885421
Q ss_pred -hhcc-------------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 246 -LRNT-------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 246 -l~~~-------------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+... ..++..+.+++.+||..||.+||++.++++|+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp 287 (327)
T 3aln_A 238 QLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHP 287 (327)
T ss_dssp --CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSH
T ss_pred HHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhCh
Confidence 1110 23667789999999999999999999999998
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-33 Score=303.57 Aligned_cols=238 Identities=18% Similarity=0.216 Sum_probs=186.8
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc------hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEec
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ------DGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~------~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e 91 (778)
..|++.+.||.|+ | +||+|+++.+++.|+||++...... ......+.+|+++|+.|+||||++++++++.+
T Consensus 10 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 10 DEYIMSKTLGSGACG--EVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hceeEeeEEecCCCE--EEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 3699999999998 8 9999999999999999999764321 12234578999999999999999999998753
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCc--
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD-- 167 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~-- 167 (778)
.+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.++.
T Consensus 88 ---------~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~NIl~~~~~~~~ 154 (322)
T 2ycf_A 88 ---------DYYIVLELMEGGELFDKVVGNKR---LKEATCKLYFYQMLLAVQYLHE-NGIIHRDLKPENVLLSSQEEDC 154 (322)
T ss_dssp ---------SEEEEEECCTTEETHHHHSTTCC---CCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEESSSSSSC
T ss_pred ---------ceEEEEecCCCCcHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHEEEecCCCCC
Confidence 489999999 479888865432 2344566679999999999996 89999999999999997765
Q ss_pred -EEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh
Q 004025 168 -WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL 246 (778)
Q Consensus 168 -~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l 246 (778)
+||+|||++....... ......++..|+|||++.+.- ...++.++|+|||||++|+|++|..||.....
T Consensus 155 ~~kl~Dfg~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~---~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 224 (322)
T 2ycf_A 155 LIKITDFGHSKILGETS-------LMRTLCGTPTYLAPEVLVSVG---TAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 224 (322)
T ss_dssp CEEECCCTTCEECCCCH-------HHHHHHSCCTTCCHHHHHHTT---TTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTC
T ss_pred eEEEccCccceeccccc-------ccccccCCcCccCchhhccCC---CCCCCchhhHHHHHHHHHHHHhCCCCCcccch
Confidence 9999999998765421 111234566899999974210 13567899999999999999999998853211
Q ss_pred --------hc---------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 --------RN---------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 --------~~---------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. ...++..+.+++++||..||.+||++.++++|+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~ 276 (322)
T 2ycf_A 225 QVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHP 276 (322)
T ss_dssp SSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred HHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCc
Confidence 00 135678899999999999999999999999998
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-33 Score=297.60 Aligned_cols=239 Identities=15% Similarity=0.233 Sum_probs=193.4
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
+...+|++.+.||.|+ | +||+|+++.++..|+||++.... ...+.+.+|+++++.++||||+++++++..+
T Consensus 10 ~~~~~~~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--- 81 (288)
T 3kfa_A 10 MERTDITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE--- 81 (288)
T ss_dssp CCGGGEEEEEESGGGTTC--SEEEEEEGGGTEEEEEEEECSCS---THHHHHHHHHHHHHHCCCTTBCCEEEEECSS---
T ss_pred ccccceeEEeecCCCCce--eEEEeEecCCCEEEEEEecCcCH---HHHHHHHHHHHHHHhCCCCCEeeEEEEEccC---
Confidence 3456799999999998 8 89999999999999999997532 2456788999999999999999999999764
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+|+||||+ ++|.+++....... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 82 -----~~~~~v~e~~~~~~L~~~~~~~~~~~-~~~~~~~~i~~~i~~~l~~lH~-~~i~H~dikp~Nil~~~~~~~~l~D 154 (288)
T 3kfa_A 82 -----PPFYIITEFMTYGNLLDYLRECNRQE-VSAVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLVGENHLVKVAD 154 (288)
T ss_dssp -----SSEEEEEECCTTEEHHHHHHHCCTTT-SCHHHHHHHHHHHHHHHHHHHH-HTCCCSCCSGGGEEECGGGCEEECC
T ss_pred -----CCEEEEEEcCCCCcHHHHHHhcccCC-ccHhHHHHHHHHHHHHHHHHHH-CCccCCCCCcceEEEcCCCCEEEcc
Confidence 3799999999 47999998754322 2344456679999999999996 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR---- 247 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~---- 247 (778)
||++........ .......++..|+|||++.+ ..++.++|+|||||++|+|++ |..||......
T Consensus 155 fg~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~ 223 (288)
T 3kfa_A 155 FGLSRLMTGDTY-----TAHAGAKFPIKWTAPESLAY------NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 223 (288)
T ss_dssp CCGGGTSCSSSS-----EEETTEEECGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH
T ss_pred CccceeccCCcc-----ccccCCccccCcCChhhhcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 999987654311 11112223447999999876 356789999999999999999 88887542211
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 ---------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+|..+.+++.+||..||.+||++.++++.
T Consensus 224 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~ 265 (288)
T 3kfa_A 224 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQA 265 (288)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHhccCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHH
Confidence 123567889999999999999999999999874
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-33 Score=296.41 Aligned_cols=240 Identities=17% Similarity=0.221 Sum_probs=183.9
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
.+|++.+.||.|+ | +||+|+++.+|+.|+||++..... .......+.+|+++++.++||||+++++++..+
T Consensus 32 ~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----- 104 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFS--EVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIED----- 104 (310)
T ss_dssp GGEEEEEEEECC--C--EEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEET-----
T ss_pred cceEEEEeecCCCCc--eEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcC-----
Confidence 3699999999998 8 999999999999999999986432 234567788999999999999999999999874
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCc-CCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..+|+||||+ ++|.+++..... ........+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+||
T Consensus 105 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~-~~i~H~dl~p~NIl~~~~~~~kl~Df 180 (310)
T 2wqm_A 105 ---NELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS-RRVMHRDIKPANVFITATGVVKLGDL 180 (310)
T ss_dssp ---TEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEECTTSCEEECCC
T ss_pred ---CcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhh-CCeeCCCCcHHHEEEcCCCCEEEEec
Confidence 3899999999 479998876332 1222344566779999999999996 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------- 246 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l------- 246 (778)
|++......... .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||.....
T Consensus 181 g~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~ 248 (310)
T 2wqm_A 181 GLGRFFSSKTTA------AHSLVGTPYYMSPERIHE------NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCK 248 (310)
T ss_dssp ------------------------CCSSCCHHHHTT------CCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHH
T ss_pred cceeeecCCCcc------ccccCCCeeEeChHHhCC------CCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHH
Confidence 998876542111 112234568999999876 3567899999999999999999988754211
Q ss_pred --hc-------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 --RN-------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 --~~-------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. ...+|..+..++.+||..||.+||++.++++..
T Consensus 249 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l 292 (310)
T 2wqm_A 249 KIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVA 292 (310)
T ss_dssp HHHTTCSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HhhcccCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHH
Confidence 00 134677899999999999999999999998753
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-33 Score=310.70 Aligned_cols=244 Identities=14% Similarity=0.159 Sum_probs=189.7
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeE-----ECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeE
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGT-----SKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTE 89 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~-----~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e 89 (778)
+...+|++.+.||.|+ | +||+|+ +..++..|+||++.... .......+.+|+.+++.++||||+++++++.
T Consensus 68 ~~~~~~~~~~~LG~G~fg--~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~ 144 (367)
T 3l9p_A 68 VPRKNITLIRGLGHGAFG--EVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQNIVRCIGVSL 144 (367)
T ss_dssp CCGGGEEEEEECCCCSSS--CEEEEEECC-----CCEEEEEEECCSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cCHhHeEEeeEeeeCCCE--EEEEEEEccCCCCCcceeEEEEeccccc-ChhhHHHHHHHHHHHHhCCCCCCCeEEEEEe
Confidence 4456799999999999 8 899999 44567789999997532 3344556889999999999999999999997
Q ss_pred ecccccCCcccEEEEEecCC--cChHHHHHHhCcC----CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEc
Q 004025 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLE----GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT 163 (778)
Q Consensus 90 ~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~----~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~ 163 (778)
.. ...||||||| ++|.+++...... .......+..++.||+.||.|||+ .+|+||||||+||+++
T Consensus 145 ~~--------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIll~ 215 (367)
T 3l9p_A 145 QS--------LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE-NHFIHRDIAARNCLLT 215 (367)
T ss_dssp SS--------SSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEES
T ss_pred cC--------CCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHh-CCeeCCCCChhhEEEe
Confidence 64 3679999999 4799999876521 112334456679999999999996 8999999999999999
Q ss_pred CCCc---EEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCC
Q 004025 164 QTLD---WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMR 239 (778)
Q Consensus 164 ~~g~---~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~ 239 (778)
.+|. +||+|||+++.+........ .....++..|+|||++.+ ..++.++|+|||||++|||++ |..
T Consensus 216 ~~~~~~~~kL~DFG~a~~~~~~~~~~~----~~~~~~t~~y~aPE~~~~------~~~~~~~DvwslG~il~ellt~g~~ 285 (367)
T 3l9p_A 216 CPGPGRVAKIGDFGMARDIYRAGYYRK----GGCAMLPVKWMPPEAFME------GIFTSKTDTWSFGVLLWEIFSLGYM 285 (367)
T ss_dssp CSSTTCCEEECCCHHHHHHHHHSSCTT----CCGGGSCGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred cCCCCceEEECCCcccccccccccccc----CCCcCCcccEECHHHhcC------CCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 6664 99999999986533211100 111233458999999876 357789999999999999998 888
Q ss_pred CCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 240 LSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 240 p~~~~~l~-------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
||...... ....+|..+.+++.+||+.+|.+||++.+++++.
T Consensus 286 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l 340 (367)
T 3l9p_A 286 PYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 340 (367)
T ss_dssp SSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHH
Confidence 88643211 1235677899999999999999999999999876
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-33 Score=309.61 Aligned_cols=240 Identities=15% Similarity=0.232 Sum_probs=189.5
Q ss_pred CCceeccCCCCCC-CceEEEEeEEC---CCCCcEEEEEEeCCCC--chhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEec
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSK---DDGSPVSIFSISGTNA--QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVE 91 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k---~~g~~VaIK~~~~~~~--~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e 91 (778)
.+|++.+.||.|+ | +||+|++. .+|+.|+||++.+... .....+.+.+|+++|+.+ .||||++++++++.+
T Consensus 54 ~~y~~~~~lG~G~~g--~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 131 (355)
T 1vzo_A 54 ENFELLKVLGTGAYG--KVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE 131 (355)
T ss_dssp GGEEEEEEEEETTTE--EEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET
T ss_pred cceEEEEEeccCCCE--EEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeC
Confidence 5799999999998 8 99999984 5899999999875321 112234567889999999 599999999999874
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEE
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~K 169 (778)
..+||||||+ ++|.+++..... .....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+|
T Consensus 132 --------~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~-~~ivH~Dlkp~NIll~~~~~~k 199 (355)
T 1vzo_A 132 --------TKLHLILDYINGGELFTHLSQRER---FTEHEVQIYVGEIVLALEHLHK-LGIIYRDIKLENILLDSNGHVV 199 (355)
T ss_dssp --------TEEEEEECCCCSCBHHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEECTTSCEE
T ss_pred --------ceEEEEeecCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCCcEE
Confidence 3899999999 479999987643 2344566679999999999996 8999999999999999999999
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh---
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--- 246 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l--- 246 (778)
|+|||+++.+..... .......++..|+|||++.+.. ..++.++|+|||||++|||++|..||.....
T Consensus 200 l~DfG~a~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~----~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~ 270 (355)
T 1vzo_A 200 LTDFGLSKEFVADET-----ERAYDFCGTIEYMAPDIVRGGD----SGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS 270 (355)
T ss_dssp ESCSSEEEECCGGGG-----GGGCGGGSCCTTCCHHHHTTCC-------CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC
T ss_pred EeeCCCCeecccCCC-----CcccCcccCcCccChhhhcCCC----CCCCchhhHHHHHHHHHHHHHCCCCCccCCccch
Confidence 999999987643211 1122335667999999987531 2456799999999999999999998853211
Q ss_pred ---------hc----cCCCCcchHHHHHHHhccCCCCCC-----ChHHHHhcc
Q 004025 247 ---------RN----TASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENS 281 (778)
Q Consensus 247 ---------~~----~~~iP~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~ 281 (778)
.. ...++..+.+++.+||..||.+|| ++.++++|+
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 271 QAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp HHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred HHHHHHHHhccCCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 01 134566788899999999999999 999999998
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-32 Score=292.50 Aligned_cols=247 Identities=17% Similarity=0.201 Sum_probs=184.0
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc-----
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI----- 93 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~----- 93 (778)
+|++.+.||.|+ | +||.|+++.+|+.|+||++.. .....+.+.+|+++++.++||||+++++.+.....
T Consensus 7 ~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (303)
T 1zy4_A 7 DFEEIAVLGQGAFG--QVVKARNALDSRYYAIKKIRH---TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPM 81 (303)
T ss_dssp HEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEE---EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC--
T ss_pred cchhhheeccCCcE--EEEEEEEcCCCeEEEEEEEec---cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhh
Confidence 599999999998 7 999999999999999999964 23446778999999999999999999998865310
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
+.......+|+||||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+
T Consensus 82 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~i~~qi~~~l~~LH~-~~i~H~dlkp~Nil~~~~~~~kl~ 158 (303)
T 1zy4_A 82 TAVKKKSTLFIQMEYCENGTLYDLIHSENLN--QQRDEYWRLFRQILEALSYIHS-QGIIHRDLKPMNIFIDESRNVKIG 158 (303)
T ss_dssp ----CEEEEEEEEECCCSCBHHHHHHHSCGG--GCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEECTTSCEEEC
T ss_pred cccccCCceEEEEecCCCCCHHHhhhccccc--cchHHHHHHHHHHHHHHHHHHh-CCeecccCCHHhEEEcCCCCEEEe
Confidence 0001135899999999 4899999864421 2234456679999999999996 899999999999999999999999
Q ss_pred ecccccccCCCCCCCC--------CCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCCh
Q 004025 172 AFDVLSEFDGNNEAAN--------GPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT 243 (778)
Q Consensus 172 dFgla~~~~~~~~~~~--------~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~ 243 (778)
|||++........... .........++..|+|||++.+. ..++.++|+|||||++|+|+++ +...
T Consensus 159 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slG~il~~l~~p--~~~~ 231 (303)
T 1zy4_A 159 DFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGT-----GHYNEKIDMYSLGIIFFEMIYP--FSTG 231 (303)
T ss_dssp CCCCCSCTTC-------------------------CTTSCHHHHTSC-----SCCCTHHHHHHHHHHHHHHHSC--CSSH
T ss_pred eCcchhhcccccchhccccccccccccccccCCCcccccCcccccCC-----CCCcchhhHHHHHHHHHHHHhc--cCCc
Confidence 9999987653211000 00001122345689999998753 3567899999999999999983 2221
Q ss_pred hh-------hhc-c--------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 244 EE-------LRN-T--------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 244 ~~-------l~~-~--------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. +.. . ..+|..+.+++++||..||.+||++.++++|+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~ 285 (303)
T 1zy4_A 232 MERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSG 285 (303)
T ss_dssp HHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSS
T ss_pred hhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCC
Confidence 11 111 0 22344578999999999999999999999998
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-33 Score=293.34 Aligned_cols=238 Identities=16% Similarity=0.180 Sum_probs=189.5
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
+...+|++.+.||.|+ | +||.|+.+ ++..|+||++...... .+.+.+|+++++.++||||+++++++..+
T Consensus 5 l~~~~y~~~~~lg~G~~g--~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--- 75 (268)
T 3sxs_A 5 LKREEITLLKELGSGQFG--VVKLGKWK-GQYDVAVKMIKEGSMS---EDEFFQEAQTMMKLSHPKLVKFYGVCSKE--- 75 (268)
T ss_dssp CCGGGEEEEEEEEEETTE--EEEEEEET-TTEEEEEEEECBTTBC---HHHHHHHHHHHHHCCCTTBCCEEEEECSS---
T ss_pred echhheeeeeeeccCCCc--eEEEEEec-CceeEEEEEeccCCCc---HHHHHHHHHHHHhCCCCCEeeEEEEEccC---
Confidence 4556899999999998 8 89999876 5778999999865433 34588999999999999999999999763
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+|+||||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 76 -----~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~i~~qi~~~l~~lH~-~~i~H~dikp~Nil~~~~~~~~l~D 147 (268)
T 3sxs_A 76 -----YPIYIVTEYISNGCLLNYLRSHGKG--LEPSQLLEMCYDVCEGMAFLES-HQFIHRDLAARNCLVDRDLCVKVSD 147 (268)
T ss_dssp -----SSEEEEEECCTTCBHHHHHHHHGGG--CCHHHHHHHHHHHHHHHHHHHH-TTEEESSCSGGGEEECTTCCEEECC
T ss_pred -----CceEEEEEccCCCcHHHHHHHcCCC--CCHHHHHHHHHHHHHHHHHHHH-CCeecCCcCcceEEECCCCCEEEcc
Confidence 3799999999 4699999875421 2234466679999999999996 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR---- 247 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~---- 247 (778)
||++......... ......++..|+|||++.+ ..++.++|+|||||++|+|++ |..||......
T Consensus 148 fg~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~ 216 (268)
T 3sxs_A 148 FGMTRYVLDDQYV-----SSVGTKFPVKWSAPEVFHY------FKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVL 216 (268)
T ss_dssp TTCEEECCTTCEE-----ECCSCCCCGGGCCHHHHHH------SEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH
T ss_pred Cccceecchhhhh-----cccCCCcCcccCCHHHHhc------cCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHH
Confidence 9999876543211 1111122346999999876 245679999999999999998 88887532111
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ---------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|..+.+++.+||..+|.+||++.+++++-
T Consensus 217 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L 259 (268)
T 3sxs_A 217 KVSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSI 259 (268)
T ss_dssp HHHTTCCCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred HHHcCCCCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 1123567789999999999999999999999874
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-33 Score=331.29 Aligned_cols=239 Identities=18% Similarity=0.215 Sum_probs=195.4
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEeccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENI 93 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~ 93 (778)
.-.+|++.+.||.|+ | +||+|+++.+++.||||++.+... .+...+.+.+|.++|..+ +||+|+++++++++.
T Consensus 339 ~~~~f~~~~~LG~G~fG--~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~-- 414 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFG--KVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM-- 414 (674)
T ss_dssp -CTTEEEEEESSBTTTB--CEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCS--
T ss_pred cccceEEEEEEccCCCE--EEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeC--
Confidence 345799999999999 8 899999999999999999985321 113345678899999988 699999999999864
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
..+||||||+ ++|..++...+. .....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+
T Consensus 415 ------~~~~lV~E~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~-~gIiHrDLKp~NILl~~~g~ikL~ 484 (674)
T 3pfq_A 415 ------DRLYFVMEYVNGGDLMYHIQQVGR---FKEPHAVFYAAEIAIGLFFLQS-KGIIYRDLKLDNVMLDSEGHIKIA 484 (674)
T ss_dssp ------SEEEEEEECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHH-TSEECCCCCSTTEEECSSSCEEEC
T ss_pred ------CEEEEEEeCcCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeEeccCChhhEEEcCCCcEEEe
Confidence 4899999999 579999987653 2344466679999999999996 899999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc---
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN--- 248 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~--- 248 (778)
|||+++....... ......++..|+|||++.+ ..++.++|+|||||+||||++|.+||.......
T Consensus 485 DFGla~~~~~~~~------~~~~~~GT~~Y~APE~l~~------~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~ 552 (674)
T 3pfq_A 485 DFGMCKENIWDGV------TTKTFCGTPDYIAPEIIAY------QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQ 552 (674)
T ss_dssp CCTTCEECCCTTC------CBCCCCSCSSSCCHHHHTC------CCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred ecceeeccccCCc------ccccccCCCcccCHhhhcC------CCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 9999986443211 1223456679999999876 467889999999999999999999986532211
Q ss_pred ---------cCCCCcchHHHHHHHhccCCCCCCCh-----HHHHhcc
Q 004025 249 ---------TASIPKSLLPDYQRLLSSMPSRRLNS-----SKLIENS 281 (778)
Q Consensus 249 ---------~~~iP~~L~~~i~~lL~~dP~~Rps~-----~~lL~~~ 281 (778)
...++..+.+++++||..||.+|+++ .++++|+
T Consensus 553 ~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ 599 (674)
T 3pfq_A 553 SIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHA 599 (674)
T ss_dssp HHHSSCCCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSG
T ss_pred HHHhCCCCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCc
Confidence 13466778999999999999999998 8999997
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-33 Score=301.45 Aligned_cols=236 Identities=22% Similarity=0.296 Sum_probs=188.7
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEE-CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCC------eeeEeee
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTS-KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPN------ILAFLHS 87 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~-k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPn------Ilk~~d~ 87 (778)
+...+|++.+.||.|+ | +||+|++ +.+++.|+||++... ....+.+.+|+++++.++|++ |++++++
T Consensus 11 ~~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~ 85 (339)
T 1z57_A 11 VLSARYEIVDTLGEGAFG--KVVECIDHKAGGRHVAVKIVKNV---DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEW 85 (339)
T ss_dssp EETTTEEEEEEEEEETTE--EEEEEEETTTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEE
T ss_pred CccCceEEEEEEecCCCe--EEEEEEecCCCCcEEEEEEEecC---CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecc
Confidence 3456899999999998 8 9999998 567899999999742 344567889999999887664 9999999
Q ss_pred eEecccccCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC--
Q 004025 88 TEVENIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ-- 164 (778)
Q Consensus 88 ~e~e~~~g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~-- 164 (778)
++.+ .++||||||+ ++|.+++....... .....+..++.||+.||.|||+ .+++||||||+||+++.
T Consensus 86 ~~~~--------~~~~lv~e~~~~~l~~~l~~~~~~~-~~~~~~~~~~~qi~~~l~~lH~-~~ivH~Dlkp~Nil~~~~~ 155 (339)
T 1z57_A 86 FEHH--------GHICIVFELLGLSTYDFIKENGFLP-FRLDHIRKMAYQICKSVNFLHS-NKLTHTDLKPENILFVQSD 155 (339)
T ss_dssp EEET--------TEEEEEEECCCCBHHHHHHHTTTCC-CCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEESCCC
T ss_pred cccC--------CcEEEEEcCCCCCHHHHHHhcCCCC-CcHHHHHHHHHHHHHHHHHHHH-CCCcCCCCCHHHEEEeccc
Confidence 9874 3899999999 57999998765322 2344566779999999999996 89999999999999987
Q ss_pred -----------------CCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHH
Q 004025 165 -----------------TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGL 227 (778)
Q Consensus 165 -----------------~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSL 227 (778)
++.+||+|||++....... ....++..|+|||++.+ ..++.++|+|||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~---------~~~~gt~~y~aPE~~~~------~~~~~~~Di~sl 220 (339)
T 1z57_A 156 YTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHH---------STLVSTRHYRAPEVILA------LGWSQPCDVWSI 220 (339)
T ss_dssp EEEEEC----CEEEEESCCCEEECCCSSCEETTSCC---------CSSCSCGGGCCHHHHTT------SCCCTHHHHHHH
T ss_pred cccccCCccccccccccCCCceEeeCcccccCcccc---------ccccCCccccChHHhhC------CCCCcchhhHHH
Confidence 6789999999988654321 11234558999999876 357889999999
Q ss_pred HHHHHHHHhCCCCCChhhhh--------ccCCC-----------------------------------------------
Q 004025 228 GCLIYELFSGMRLSKTEELR--------NTASI----------------------------------------------- 252 (778)
Q Consensus 228 G~liyel~tg~~p~~~~~l~--------~~~~i----------------------------------------------- 252 (778)
||++|||++|..||...... ....+
T Consensus 221 G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (339)
T 1z57_A 221 GCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDV 300 (339)
T ss_dssp HHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSH
T ss_pred HHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchh
Confidence 99999999999888532110 01111
Q ss_pred -CcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 253 -PKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 253 -P~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+..+.+++.+||..||.+||++.++++|+
T Consensus 301 ~~~~l~~li~~~L~~dP~~Rpt~~ell~hp 330 (339)
T 1z57_A 301 EHERLFDLIQKMLEYDPAKRITLREALKHP 330 (339)
T ss_dssp HHHHHHHHHHHHTCSSTTTSCCHHHHTTSG
T ss_pred hHHHHHHHHHHHhCcCcccccCHHHHhcCH
Confidence 23467899999999999999999999998
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-33 Score=309.28 Aligned_cols=242 Identities=18% Similarity=0.249 Sum_probs=189.5
Q ss_pred CCCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-----------CCCee
Q 004025 15 GVKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-----------HPNIL 82 (778)
Q Consensus 15 ~~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-----------HPnIl 82 (778)
.+...+|++.+.||.|+ | +||+|+++.+|+.|+||++... ....+.+.+|+++++.++ ||||+
T Consensus 15 ~~~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~ 89 (373)
T 1q8y_A 15 PYKDARYILVRKLGWGHFS--TVWLAKDMVNNTHVAMKIVRGD---KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHIL 89 (373)
T ss_dssp EETTTTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBC
T ss_pred cccCCeEEEEEeeeecCCe--EEEEEEecCCCcEEEEEEecCC---ccchhhhhHHHHHHHHhhcccccchhccccchHH
Confidence 44567899999999998 8 9999999999999999999743 234566888999999887 89999
Q ss_pred eEeeeeEecccccCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeE
Q 004025 83 AFLHSTEVENIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVV 161 (778)
Q Consensus 83 k~~d~~e~e~~~g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~ 161 (778)
++++++.....+ ..++|+|||++ ++|.+++....... .....+..++.||+.||.|||+.++++||||||+||+
T Consensus 90 ~~~~~~~~~~~~----~~~~~lv~e~~~~~L~~~~~~~~~~~-~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIl 164 (373)
T 1q8y_A 90 KLLDHFNHKGPN----GVHVVMVFEVLGENLLALIKKYEHRG-IPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVL 164 (373)
T ss_dssp CCCEEEEEEETT----EEEEEEEECCCCEEHHHHHHHTTTSC-CCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEE
T ss_pred HHHHHhhccCCC----CceEEEEEecCCCCHHHHHHHhhccC-CcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeE
Confidence 999999865322 34899999999 47999988754322 2344566779999999999997349999999999999
Q ss_pred Ec------CCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHH
Q 004025 162 VT------QTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELF 235 (778)
Q Consensus 162 v~------~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~ 235 (778)
|+ ..+.+||+|||++....... ....++..|+|||++.+ ..++.++|+|||||++|||+
T Consensus 165 l~~~~~~~~~~~~kl~Dfg~a~~~~~~~---------~~~~~t~~y~aPE~~~~------~~~~~~~Di~slG~il~el~ 229 (373)
T 1q8y_A 165 MEIVDSPENLIQIKIADLGNACWYDEHY---------TNSIQTREYRSPEVLLG------APWGCGADIWSTACLIFELI 229 (373)
T ss_dssp EEEEETTTTEEEEEECCCTTCEETTBCC---------CSCCSCGGGCCHHHHHT------CCCCTHHHHHHHHHHHHHHH
T ss_pred EeccCCCcCcceEEEcccccccccCCCC---------CCCCCCccccCcHHHhC------CCCCchHhHHHHHHHHHHHH
Confidence 95 44579999999998765421 11234568999999876 35778999999999999999
Q ss_pred hCCCCCChhhh----------h----ccC------------------------------------------CC----Ccc
Q 004025 236 SGMRLSKTEEL----------R----NTA------------------------------------------SI----PKS 255 (778)
Q Consensus 236 tg~~p~~~~~l----------~----~~~------------------------------------------~i----P~~ 255 (778)
+|..||..... . ... .+ +..
T Consensus 230 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (373)
T 1q8y_A 230 TGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKE 309 (373)
T ss_dssp HSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHH
T ss_pred hCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHH
Confidence 99998863210 0 001 11 235
Q ss_pred hHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 256 LLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 256 L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+.+++.+||..||.+||++.++++|+
T Consensus 310 ~~~li~~~L~~dP~~Rpt~~ell~hp 335 (373)
T 1q8y_A 310 ISDFLSPMLQLDPRKRADAGGLVNHP 335 (373)
T ss_dssp HHHHHGGGGCSSTTTCBCHHHHHTCG
T ss_pred HHHHHHHHhccCccccCCHHHHhhCh
Confidence 66789999999999999999999998
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-33 Score=301.03 Aligned_cols=239 Identities=12% Similarity=0.119 Sum_probs=187.2
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.||.|+ | +||+|+++ +|+.|+||++..... ...+.+.+|+++|+.++||||+++++++...
T Consensus 39 ~~y~~~~~lg~G~~g--~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------ 107 (321)
T 2qkw_B 39 NNFDHKFLIGHGVFG--KVYKGVLR-DGAKVALKRRTPESS--QGIEEFETEIETLSFCRHPHLVSLIGFCDER------ 107 (321)
T ss_dssp CCCSCCCCSCBCSSS--EEEEEECT-TCCEEEEEECCSCCS--SHHHHHHHHHHGGGSCCCTTBCCEEEECCCT------
T ss_pred hccCccceeecCCCe--eEEEEEEC-CCCEEEEEEecccCh--HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC------
Confidence 5799999999998 8 99999965 689999999876432 3456789999999999999999999999763
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCC-CcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEG-SQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~-~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+|+||||+ ++|.+++....... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 108 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~-~~ivH~dlkp~Nil~~~~~~~kl~Dfg 184 (321)
T 2qkw_B 108 --NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT-RAIIHRDVKSINILLDENFVPKITDFG 184 (321)
T ss_dssp --TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHH-TTEECSCCCSTTEEECTTCCEEECCCT
T ss_pred --CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcC-CCeecCCCCHHHEEECCCCCEEEeecc
Confidence 3789999999 47988876544222 12344566779999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh-------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------- 247 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------- 247 (778)
++......... .......++..|+|||++.+. .++.++|+|||||++|||++|..||......
T Consensus 185 ~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~------~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~ 254 (321)
T 2qkw_B 185 ISKKGTELDQT----HLSTVVKGTLGYIDPEYFIKG------RLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAE 254 (321)
T ss_dssp TCEECSSSSCC----CCBCCCEEETTTCCHHHHHHC------BCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHH
T ss_pred ccccccccccc----ccccccCCCccccCHHHhcCC------CCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHH
Confidence 99875432111 011122345689999998763 5678999999999999999999887432100
Q ss_pred ------------cc------CC----CCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ------------NT------AS----IPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ------------~~------~~----iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. .. ++..+.+++.+||..||.+||++.+++++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L 310 (321)
T 2qkw_B 255 WAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310 (321)
T ss_dssp HTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 00 01 123467788999999999999999999874
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-33 Score=299.49 Aligned_cols=243 Identities=15% Similarity=0.176 Sum_probs=192.9
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEE-----CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeE
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTS-----KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTE 89 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~-----k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e 89 (778)
...+|++++.||.|+ | +||+|++ ..++..|+||++..... ....+.+.+|+++|++| +||||++++++++
T Consensus 21 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 97 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFG--KVVEATAYGLIKSDAAMTVAVKMLKPSAH-LTEREALMSELKVLSYLGNHMNIVNLLGACT 97 (313)
T ss_dssp CGGGEEEEEEEEECSSE--EEEEEEEESSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ChhhhhHHHhhCccCCc--ceEEEEEeeccccchhhhhHHHhcCcchh-HHHHHHHHHHHHHHhhcccCCCeeeEEEEEe
Confidence 445799999999998 8 9999984 55778999999986532 33457789999999999 8999999999997
Q ss_pred ecccccCCcccEEEEEecCC--cChHHHHHHhCcC---------------CCcchHHHHHHHHHHHHHHHHHHcCCCccc
Q 004025 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLE---------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVH 152 (778)
Q Consensus 90 ~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~---------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH 152 (778)
.+ ..+|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++|
T Consensus 98 ~~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~H 168 (313)
T 1t46_A 98 IG--------GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS-KNCIH 168 (313)
T ss_dssp SS--------SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH-TTCCC
T ss_pred cC--------CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH-CCeec
Confidence 64 3789999999 4899999875421 012344566779999999999996 89999
Q ss_pred cccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHH
Q 004025 153 GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIY 232 (778)
Q Consensus 153 ~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liy 232 (778)
|||||+||+++.+|.+||+|||++......... .......++..|+|||++.+ ..++.++|+|||||++|
T Consensus 169 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~ 238 (313)
T 1t46_A 169 RDLAARNILLTHGRITKICDFGLARDIKNDSNY----VVKGNARLPVKWMAPESIFN------CVYTFESDVWSYGIFLW 238 (313)
T ss_dssp SCCSGGGEEEETTTEEEECCCGGGSCTTSCTTS----EECSSSEECGGGCCHHHHHH------CCCCHHHHHHHHHHHHH
T ss_pred CCCccceEEEcCCCCEEEccccccccccccccc----eeccCCCCcceeeChHHhcC------CCCChHHHHHHHHHHHH
Confidence 999999999999999999999999877553211 01111223447999999876 35778999999999999
Q ss_pred HHHh-CCCCCChhhh--------h------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 233 ELFS-GMRLSKTEEL--------R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 233 el~t-g~~p~~~~~l--------~------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+|++ |..||..... . ....+|..+.+++.+||..||.+||++.+++++-
T Consensus 239 ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L 302 (313)
T 1t46_A 239 ELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 302 (313)
T ss_dssp HHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHhCCCCCCCcccchhHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence 9998 8888754211 0 1235677899999999999999999999998763
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-33 Score=291.30 Aligned_cols=240 Identities=21% Similarity=0.227 Sum_probs=190.7
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc--
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA-- 95 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g-- 95 (778)
.+|++.+.||.|+ | +||+|+++.+|+.|+||++.... +.+.+|+++++.++||||++++++++....+.
T Consensus 11 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (284)
T 2a19_B 11 MDFKEIELIGSGGFG--QVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPET 82 (284)
T ss_dssp HHEEEEEEEECSSSC--CEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---
T ss_pred cccceeeeeccCCce--EEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccc
Confidence 4699999999998 8 89999999999999999998642 23668999999999999999999886411000
Q ss_pred ------CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCc
Q 004025 96 ------TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD 167 (778)
Q Consensus 96 ------~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~ 167 (778)
......+|+||||+ ++|.+++....... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~-~~~~~~~~i~~qi~~~l~~lH~-~~i~H~dlkp~Nil~~~~~~ 160 (284)
T 2a19_B 83 SSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK-LDKVLALELFEQITKGVDYIHS-KKLINRDLKPSNIFLVDTKQ 160 (284)
T ss_dssp ------CCEEEEEEEEECCCCSCBHHHHHHHGGGSC-CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEEEETTE
T ss_pred ccccccccCcceEEEEEeccCCCCHHHHHhhccCCC-CCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCHHHEEEcCCCC
Confidence 00134799999999 48999998653221 2344456679999999999996 89999999999999999999
Q ss_pred EEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh--
Q 004025 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-- 245 (778)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-- 245 (778)
+||+|||++........ .....++..|+|||++.+ ..++.++|+|||||++|+|++|..++....
T Consensus 161 ~kl~Dfg~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~ 227 (284)
T 2a19_B 161 VKIGDFGLVTSLKNDGK-------RTRSKGTLRYMSPEQISS------QDYGKEVDLYALGLILAELLHVCDTAFETSKF 227 (284)
T ss_dssp EEECCCTTCEESSCCSC-------CCCCCSCCTTSCHHHHHC------SCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHH
T ss_pred EEECcchhheecccccc-------ccccCCcccccChhhhcc------CCCcchhhhHHHHHHHHHHHhcCCcchhHHHH
Confidence 99999999987765321 112235568999999876 356789999999999999999987764221
Q ss_pred ---hh---ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 246 ---LR---NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 246 ---l~---~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+. ....+|..+.+++.+||..||.+||++.+++++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l 269 (284)
T 2a19_B 228 FTDLRDGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTL 269 (284)
T ss_dssp HHHHHTTCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHhhcccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 11 1134677889999999999999999999999886
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-33 Score=308.61 Aligned_cols=241 Identities=15% Similarity=0.166 Sum_probs=180.8
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEEC---CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSK---DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k---~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~ 92 (778)
...+|++.+.||.|+ | +||+|+++ .++..|+||++.... .+...+.+.+|+++|++|+||||+++++++...
T Consensus 43 ~~~~~~~~~~lG~G~fg--~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~- 118 (373)
T 2qol_A 43 DATNISIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKS- 118 (373)
T ss_dssp CGGGCCCCEEEEECSSS--EEEEC-CBCTTSCBCCEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS-
T ss_pred CHhhceeeeEEeeCCCe--EEEEEEEecCCCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeC-
Confidence 445799999999998 8 99999987 467889999997643 344566789999999999999999999999763
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEE
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
..+||||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||
T Consensus 119 -------~~~~lv~e~~~~~sL~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~-~~ivH~Dlkp~NIll~~~~~~kl 188 (373)
T 2qol_A 119 -------KPVMIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSD-MGYVHRDLAARNILINSNLVCKV 188 (373)
T ss_dssp -------SSCEEEEECCTTCBHHHHHHTTTT--CSCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEECTTCCEEE
T ss_pred -------CceEEEEeCCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHH-CCeeCCCCCcceEEEcCCCCEEE
Confidence 3789999999 589999976532 12344466679999999999996 89999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh--
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR-- 247 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~-- 247 (778)
+|||+++........ ........++..|+|||++.+ ..++.++|+|||||++|||++ |..||......
T Consensus 189 ~Dfg~a~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~ 259 (373)
T 2qol_A 189 SDFGLGRVLEDDPEA---AYTTRGGKIPIRWTSPEAIAY------RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259 (373)
T ss_dssp CCC-------------------------CTTSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHH
T ss_pred CcCccccccccCCcc---ceeccCCCcCCCccChhhhcc------CCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 999999877543211 111111123457999999876 357789999999999999997 88887432110
Q ss_pred -----------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 -----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 -----------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+|..+.+++.+||..+|.+||++.++++.
T Consensus 260 ~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~ 303 (373)
T 2qol_A 260 IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303 (373)
T ss_dssp HHHHHTTEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHcCCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHH
Confidence 123567789999999999999999999998864
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-33 Score=293.89 Aligned_cols=238 Identities=13% Similarity=0.135 Sum_probs=186.5
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
+...+|++.+.||.|+ | +||.|+++ ++..|+||++...... .+.+.+|+++++.++||||+++++++..+
T Consensus 21 ~~~~~y~~~~~lg~G~~g--~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--- 91 (283)
T 3gen_A 21 IDPKDLTFLKELGTGQFG--VVKYGKWR-GQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQLYGVCTKQ--- 91 (283)
T ss_dssp CCGGGEEEEEECC---CE--EEEEEEET-TTEEEEEEEECTTSBC---HHHHHHHHHHHHTCCCTTBCCEEEEECSS---
T ss_pred CCHHHHHhHhhcCCCCCc--eEEEEEEc-CCCeEEEEEecCCCCC---HHHHHHHHHHHhcCCCCCEeeEEEEEecC---
Confidence 3445799999999998 8 99999887 6778999999865433 34588999999999999999999999763
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+|+||||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 92 -----~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~i~~qi~~~l~~lH~-~~i~H~dikp~Nili~~~~~~kl~D 163 (283)
T 3gen_A 92 -----RPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLES-KQFLHRDLAARNCLVNDQGVVKVSD 163 (283)
T ss_dssp -----SSEEEEECCCTTCBHHHHHHCGGGC--CCHHHHHHHHHHHHHHHHHHHH-TTCCCSSCSGGGEEECTTSCEEECS
T ss_pred -----CCeEEEEeccCCCcHHHHHHHhccC--CCHHHHHHHHHHHHHHHHHHHH-CCccCCCCccceEEEcCCCCEEEcc
Confidence 3799999999 4799998763321 2344466679999999999996 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh-----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL----- 246 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l----- 246 (778)
||++.......... .....++..|+|||++.+ ..++.++|+|||||++|+|++ |..||.....
T Consensus 164 fg~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~ 232 (283)
T 3gen_A 164 FGLSRYVLDDEYTS-----SVGSKFPVRWSPPEVLMY------SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE 232 (283)
T ss_dssp TTGGGGBCCHHHHS-----TTSTTSCGGGCCHHHHHH------CCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH
T ss_pred cccccccccccccc-----ccCCccCcccCCHHHhcc------CCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHH
Confidence 99998765421100 111122347999999876 356789999999999999998 8888753211
Q ss_pred --h------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 --R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 --~------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ....+|..+.+++.+||..+|.+||++.+++++-
T Consensus 233 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L 275 (283)
T 3gen_A 233 HIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNI 275 (283)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred HHhcccCCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHH
Confidence 1 1134567789999999999999999999999874
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-33 Score=302.12 Aligned_cols=244 Identities=14% Similarity=0.191 Sum_probs=185.9
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|++.+.||.|+ | +||+|+++ ++.||||++... ........+|+.+|++++||||+++++++......
T Consensus 22 ~~~~y~~~~~lg~G~~g--~Vy~~~~~--~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~- 93 (322)
T 3soc_A 22 QSMPLQLLEVKARGRFG--CVWKAQLL--NEYVAVKIFPIQ---DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSV- 93 (322)
T ss_dssp TTEEEEEEEEEECSTTC--EEEEEEET--TEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSS-
T ss_pred chhhchhhheecccCce--EEEEEEEC--CCEEEEEEeecC---chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCC-
Confidence 345799999999998 8 99999886 799999999643 22334566799999999999999999999875421
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCC----------CccccccCCCCeEEc
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDC----------KLVHGNVCLSSVVVT 163 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~----------~ivH~dLkp~NI~v~ 163 (778)
...+||||||| ++|.++++.... ....+..++.||+.||.|||+ . +++||||||+||+++
T Consensus 94 ---~~~~~lv~e~~~~g~L~~~l~~~~~----~~~~~~~i~~qi~~al~~LH~-~~~~l~~~~~~~ivH~Dlkp~Nill~ 165 (322)
T 3soc_A 94 ---DVDLWLITAFHEKGSLSDFLKANVV----SWNELCHIAETMARGLAYLHE-DIPGLKDGHKPAISHRDIKSKNVLLK 165 (322)
T ss_dssp ---SEEEEEEEECCTTCBHHHHHHHCCB----CHHHHHHHHHHHHHHHHHHTC-CEEEETTEEECEEECSCCSGGGEEEC
T ss_pred ---CceEEEEEecCCCCCHHHHHHhcCC----CHHHHHHHHHHHHHHHHHHHh-hccccccccCCCEEeCCCChHhEEEC
Confidence 34689999999 489999987542 334466679999999999995 7 999999999999999
Q ss_pred CCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCCh
Q 004025 164 QTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT 243 (778)
Q Consensus 164 ~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~ 243 (778)
.+|.+||+|||++..+....... ......++..|+|||++.+... ....++.++|+|||||++|||++|..||..
T Consensus 166 ~~~~~kL~DFg~a~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~-~~~~~~~~~DiwslG~il~el~tg~~pf~~ 240 (322)
T 3soc_A 166 NNLTACIADFGLALKFEAGKSAG----DTHGQVGTRRYMAPEVLEGAIN-FQRDAFLRIDMYAMGLVLWELASRCTAADG 240 (322)
T ss_dssp TTCCEEECCCTTCEEECTTSCCC----CCTTCCCCGGGCCHHHHTTCCC-CCHHHHHHHHHHHHHHHHHHHHTTBTTSSS
T ss_pred CCCeEEEccCCcccccccccCcc----ccccCccCccccCHhhcccccc-cCcCCCccchhHHHHHHHHHHHhCCCCCCC
Confidence 99999999999998775432111 1112345568999999875210 001234578999999999999999888743
Q ss_pred hh-------------------hhc-------cCCCC---------cchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 244 EE-------------------LRN-------TASIP---------KSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 244 ~~-------------------l~~-------~~~iP---------~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. +.. ...++ ..+.+++.+||..||.+||++.++++.-
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L 313 (322)
T 3soc_A 241 PVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERI 313 (322)
T ss_dssp CCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 11 000 01111 2288899999999999999999998753
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-33 Score=297.98 Aligned_cols=248 Identities=13% Similarity=0.111 Sum_probs=183.6
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECC---CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKD---DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~---~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
...|.+++.||.|+ | +||+|+.+. ++..|+||++..........+.+.+|++.+++++||||+++++++.....
T Consensus 33 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 33 RNLLILGKILGEGEFG--SVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp GGGEEEEEEEEC-CCC--CEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred HHHeeeccceeecCCe--EEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 45799999999998 8 899998765 34589999998765555667789999999999999999999999986432
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCc---CCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcE
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGL---EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDW 168 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~---~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~ 168 (778)
.+ ....|+||||+ ++|.+++..... ........+..++.||+.||.|||+ .+++||||||+||+++.+|.+
T Consensus 111 ~~---~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~ivH~dikp~NIli~~~~~~ 186 (313)
T 3brb_A 111 QG---IPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN-RNFLHRDLAARNCMLRDDMTV 186 (313)
T ss_dssp -------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHT-TTCCCCCCSGGGEEECTTSCE
T ss_pred cC---CcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCcceEEEcCCCcE
Confidence 11 12569999999 589999865432 1223345567779999999999995 899999999999999999999
Q ss_pred EEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh
Q 004025 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR 247 (778)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~ 247 (778)
||+|||++........... .....++..|+|||.+.+ ..++.++|+|||||++|+|++ |..||......
T Consensus 187 kl~Dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~ 256 (313)
T 3brb_A 187 CVADFGLSKKIYSGDYYRQ----GRIAKMPVKWIAIESLAD------RVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH 256 (313)
T ss_dssp EECSCSCC--------------------CCGGGSCHHHHHS------SCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG
T ss_pred EEeecCcceecccccccCc----ccccCCCccccCchhhcC------CCccchhhhHHHHHHHHHHHhcCCCCCccCCHH
Confidence 9999999987654221110 111123447999999876 357789999999999999999 77777532211
Q ss_pred -------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|..+.+++.+||..+|.+||++.+++++-
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L 303 (313)
T 3brb_A 257 EMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQL 303 (313)
T ss_dssp GHHHHHHTTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 1245677899999999999999999999998764
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=312.54 Aligned_cols=239 Identities=20% Similarity=0.230 Sum_probs=189.1
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
..+|++++.||.|+ | +||+|+++.+++.|+||++... ......+.+.+|+++|+.++||||+++++++..+
T Consensus 113 ~~~~~~~~~lG~G~~g--~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~----- 184 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFG--EVFSGRLRADNTLVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK----- 184 (377)
T ss_dssp GGGEEEEEEEEEETTE--EEEEEEETTTCCEEEEEECCTT-SCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSS-----
T ss_pred hHHeEEeeEeccCCCC--eEEEEEEecCCeEEEEEEcccc-CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecC-----
Confidence 34789999999998 8 9999999999999999998754 2333455688999999999999999999999763
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+||||||+ ++|.++++..+.. .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 185 ---~~~~lv~e~~~~g~L~~~l~~~~~~--~~~~~~~~~~~qi~~~l~~LH~-~~ivHrDlkp~Nil~~~~~~~kl~DfG 258 (377)
T 3cbl_A 185 ---QPIYIVMELVQGGDFLTFLRTEGAR--LRVKTLLQMVGDAAAGMEYLES-KCCIHRDLAARNCLVTEKNVLKISDFG 258 (377)
T ss_dssp ---SSCEEEEECCTTCBHHHHHHHHGGG--CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECTTCCEEECCGG
T ss_pred ---CCcEEEEEcCCCCCHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHH-CCcCCcccCHHHEEEcCCCcEEECcCC
Confidence 3789999999 5899999865421 2234466679999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh-------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL------- 246 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l------- 246 (778)
++............ .....+..|+|||++.++ .++.++|+|||||++|||++ |..||.....
T Consensus 259 ~s~~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~------~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~ 328 (377)
T 3cbl_A 259 MSREEADGVYAASG----GLRQVPVKWTAPEALNYG------RYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFV 328 (377)
T ss_dssp GCEECTTSEEECCS----SCCEEEGGGSCHHHHHHC------EEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHH
T ss_pred CceecCCCceeecC----CCCCCCcCcCCHhHhccC------CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 99865432110000 001123479999998753 45679999999999999998 8888753211
Q ss_pred h------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 247 R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 247 ~------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. ....+|..+.+++.+||..||.+||++.++++.
T Consensus 329 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~ 368 (377)
T 3cbl_A 329 EKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQE 368 (377)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 1 113467788999999999999999999998864
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-33 Score=302.74 Aligned_cols=238 Identities=20% Similarity=0.236 Sum_probs=192.7
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch----hHHHHHHHHHHHHhcCC--CCCeeeEeeeeE
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD----GHLAAARNGVKRLRTVR--HPNILAFLHSTE 89 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~----~~~~~~~~ev~~Lk~Lr--HPnIlk~~d~~e 89 (778)
...+|++++.||.|+ | +||+|+++.+|+.|+||++....... .....+.+|+.+++.++ ||||++++++++
T Consensus 41 ~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFG--SVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp CTTTEEEEEECSSSSSC--EEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred ccCceEEEEEEeeCCCe--EEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 456799999999998 8 99999999999999999998643221 11234668899999997 599999999998
Q ss_pred ecccccCCcccEEEEEecCC---cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEc-CC
Q 004025 90 VENIDATSTKITIYIVTEPV---MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT-QT 165 (778)
Q Consensus 90 ~e~~~g~~~~~~lyIVtE~v---~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~-~~ 165 (778)
.+ ..+|+|+|++ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++ .+
T Consensus 119 ~~--------~~~~lv~e~~~~~~~L~~~l~~~~~---l~~~~~~~i~~qi~~~L~~LH~-~~ivH~Dlkp~NIll~~~~ 186 (320)
T 3a99_A 119 RP--------DSFVLILERPEPVQDLFDFITERGA---LQEELARSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNR 186 (320)
T ss_dssp CS--------SEEEEEEECCSSEEEHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEEETTT
T ss_pred cC--------CcEEEEEEcCCCCccHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHH-CCcEeCCCCHHHEEEeCCC
Confidence 64 4899999999 369999887543 2344466679999999999996 8999999999999999 78
Q ss_pred CcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh
Q 004025 166 LDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE 245 (778)
Q Consensus 166 g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~ 245 (778)
|.+||+|||++....... .....++..|+|||++.+. ...+.++|+|||||++|||++|..||....
T Consensus 187 ~~~kL~Dfg~~~~~~~~~--------~~~~~gt~~y~aPE~~~~~-----~~~~~~~Di~slG~il~el~~g~~pf~~~~ 253 (320)
T 3a99_A 187 GELKLIDFGSGALLKDTV--------YTDFDGTRVYSPPEWIRYH-----RYHGRSAAVWSLGILLYDMVCGDIPFEHDE 253 (320)
T ss_dssp TEEEECCCTTCEECCSSC--------BCCCCSCGGGSCHHHHHHS-----CBCHHHHHHHHHHHHHHHHHHSSCSCCSHH
T ss_pred CCEEEeeCcccccccccc--------ccCCCCCccCCChHHhccC-----CCCCccchHHhHHHHHHHHHHCCCCCCChh
Confidence 999999999998775421 1112345589999998753 233568999999999999999999886542
Q ss_pred h--h----ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 246 L--R----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 246 l--~----~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. . ....+|..+.+++.+||..||.+||++.++++|+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp 295 (320)
T 3a99_A 254 EIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHP 295 (320)
T ss_dssp HHHHCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred hhhcccccccccCCHHHHHHHHHHccCChhhCcCHHHHhcCH
Confidence 1 1 1246788899999999999999999999999998
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-33 Score=290.49 Aligned_cols=239 Identities=14% Similarity=0.140 Sum_probs=191.4
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
+...+|++.+.||.|+ | +||+|+++ |+.|+||++..........+.+.+|++.+++++||||+++++++....
T Consensus 7 i~~~~y~~~~~lg~G~~g--~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 80 (271)
T 3kmu_A 7 IDFKQLNFLTKLNENHSG--ELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPP-- 80 (271)
T ss_dssp CCGGGCEEEEEEEEETTE--EEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTT--
T ss_pred CCHHHhHHHHHhcCCCcc--eEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCC--
Confidence 4456799999999998 8 99999985 889999999876655566678999999999999999999999997653
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCC--ccccccCCCCeEEcCCCcEEE
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCK--LVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~--ivH~dLkp~NI~v~~~g~~KL 170 (778)
...+|+||||+ ++|.+++...... ......+..++.||+.||.|||+ .+ ++||||||+||+++.+|.+||
T Consensus 81 ----~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~-~~~~i~H~dikp~Nil~~~~~~~~l 154 (271)
T 3kmu_A 81 ----APHPTLITHWMPYGSLYNVLHEGTNF-VVDQSQAVKFALDMARGMAFLHT-LEPLIPRHALNSRSVMIDEDMTARI 154 (271)
T ss_dssp ----SSSCEEEEECCTTCBHHHHHHSCSSC-CCCHHHHHHHHHHHHHHHHHHTT-SSSCCTTCCCSGGGEEECTTSCEEE
T ss_pred ----CCCeEeeecccCCCcHHHHHhhcccC-CCCHHHHHHHHHHHHHHHHHHhc-CCCceecCCCccceEEEcCCcceeE
Confidence 24789999999 4899999865421 12344466679999999999995 78 999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh---
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--- 247 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~--- 247 (778)
+|||+....... ...++..|+|||++.+.-. ..++.++|+|||||++|||++|..||......
T Consensus 155 ~~~~~~~~~~~~-----------~~~~t~~y~aPE~~~~~~~---~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~ 220 (271)
T 3kmu_A 155 SMADVKFSFQSP-----------GRMYAPAWVAPEALQKKPE---DTNRRSADMWSFAVLLWELVTREVPFADLSNMEIG 220 (271)
T ss_dssp EGGGSCCTTSCT-----------TCBSCGGGSCHHHHHSCGG---GSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHH
T ss_pred Eeccceeeeccc-----------CccCCccccChhhhccCCC---CCCCchhhHHHHHHHHHHHHhCCCCccccChHHHH
Confidence 999987654331 1134558999999876310 12233799999999999999999988642111
Q ss_pred -----------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 -----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 -----------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+|..+.+++.+||..||.+||++.++++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 264 (271)
T 3kmu_A 221 MKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPI 264 (271)
T ss_dssp HHHHHSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 113567789999999999999999999999864
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-33 Score=301.82 Aligned_cols=243 Identities=13% Similarity=0.151 Sum_probs=191.1
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEEC-----CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEe
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSK-----DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k-----~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~ 90 (778)
...+|++.+.||.|+ | +||+|+++ .++..|+||++.... .......+.+|+++++.++||||+++++++..
T Consensus 23 ~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 99 (322)
T 1p4o_A 23 AREKITMSRELGQGSFG--MVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 99 (322)
T ss_dssp CGGGEEEEEEEEECSSS--EEEEEEEEEEETTEEEEEEEEEECCTTS-CHHHHHHHHHHHHHGGGCCCTTBCCEEEEECS
T ss_pred hhhheeeeeEeccCCce--EEEeeeecCccCCCCceEEEEEeccccc-CHHHHHHHHHHHHHHHhcCCCCEeeeEEEEcc
Confidence 345799999999998 8 99999876 457889999997543 23345568899999999999999999999976
Q ss_pred cccccCCcccEEEEEecCC--cChHHHHHHhCc-------CCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeE
Q 004025 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGL-------EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVV 161 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~-------~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~ 161 (778)
. ..+|+||||+ ++|.+++..... ........+..++.||+.||.|||+ .+++||||||+||+
T Consensus 100 ~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~i~H~dikp~NIl 170 (322)
T 1p4o_A 100 G--------QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA-NKFVHRDLAARNCM 170 (322)
T ss_dssp S--------SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH-TTCBCSCCSGGGEE
T ss_pred C--------CccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH-CCCccCCCccceEE
Confidence 3 3789999999 489999876431 1122344566679999999999996 89999999999999
Q ss_pred EcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCC
Q 004025 162 VTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRL 240 (778)
Q Consensus 162 v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p 240 (778)
++.+|.+||+|||++......... .......++..|+|||++.+ ..++.++|+|||||++|+|++ |..|
T Consensus 171 i~~~~~~kl~Dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el~~~g~~p 240 (322)
T 1p4o_A 171 VAEDFTVKIGDFGMTRDIYETDYY----RKGGKGLLPVRWMSPESLKD------GVFTTYSDVWSFGVVLWEIATLAEQP 240 (322)
T ss_dssp ECTTCCEEECCTTCCCGGGGGGCE----EGGGSSEECGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHHTSCCT
T ss_pred EcCCCeEEECcCcccccccccccc----ccccCCCCCCCccChhhhcc------CCCCchhhHHHHHHHHHHHHhcCCCc
Confidence 999999999999998866432110 00111233457999999876 356789999999999999999 7777
Q ss_pred CChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 241 SKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 241 ~~~~~l~-------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
|...... ....+|..+.+++.+||..||.+||++.+++++-
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L 294 (322)
T 1p4o_A 241 YQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 294 (322)
T ss_dssp TTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred cccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 7532111 1245677899999999999999999999999875
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-33 Score=295.78 Aligned_cols=236 Identities=16% Similarity=0.178 Sum_probs=188.9
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCC-------cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeee
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGS-------PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHS 87 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~-------~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~ 87 (778)
+...+|++.+.||.|+ | +||+|+++.+++ .|+||++... .....+.+.+|+++++.++||||++++++
T Consensus 5 i~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 80 (289)
T 4fvq_A 5 IRNEDLIFNESLGQGTFT--KIFKGVRREVGDYGQLHETEVLLKVLDKA--HRNYSESFFEAASMMSKLSHKHLVLNYGV 80 (289)
T ss_dssp CCGGGEEEEEEEEEETTE--EEEEEEEEEECGGGCEEEEEEEEEEECGG--GGGGHHHHHHHHHHHHTSCCTTBCCEEEE
T ss_pred echhHeeeeeeeccCCCc--eEEEEEEecccccccccchhhhhhhcccc--cHHHHHHHHHHHHHHHhCCCCCEeEEEEE
Confidence 4566899999999998 8 999999988774 6999999753 22345678999999999999999999999
Q ss_pred eEecccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC
Q 004025 88 TEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT 165 (778)
Q Consensus 88 ~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~ 165 (778)
++.+ ...||||||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.+
T Consensus 81 ~~~~--------~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~i~~qi~~~L~~LH~-~~ivH~Dlkp~NIll~~~ 149 (289)
T 4fvq_A 81 CVCG--------DENILVQEFVKFGSLDTYLKKNKNC--INILWKLEVAKQLAAAMHFLEE-NTLIHGNVCAKNILLIRE 149 (289)
T ss_dssp ECCT--------TCCEEEEECCTTCBHHHHHHHTGGG--CCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEEEEC
T ss_pred EEeC--------CCCEEEEECCCCCCHHHHHHhCCCC--CCHHHHHHHHHHHHHHHHHHhh-CCeECCCcCcceEEEecC
Confidence 9864 3789999999 4899999875421 2234456679999999999996 899999999999999988
Q ss_pred Cc--------EEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhC
Q 004025 166 LD--------WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237 (778)
Q Consensus 166 g~--------~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg 237 (778)
+. +||+|||++...... ....++..|+|||++.+. ..++.++|+|||||++|||++|
T Consensus 150 ~~~~~~~~~~~kl~Dfg~~~~~~~~----------~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~il~el~~g 214 (289)
T 4fvq_A 150 EDRKTGNPPFIKLSDPGISITVLPK----------DILQERIPWVPPECIENP-----KNLNLATDKWSFGTTLWEICSG 214 (289)
T ss_dssp CBGGGTBCCEEEECCCCSCTTTSCH----------HHHHHTTTTSCHHHHHCG-----GGCCHHHHHHHHHHHHHHHHTT
T ss_pred CcccccccceeeeccCcccccccCc----------cccCCcCcccCHHHhCCC-----CCCCchhHHHHHHHHHHHHHcC
Confidence 87 999999998765431 112345589999998752 3467899999999999999996
Q ss_pred C-CCCChhhh-------h----ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 238 M-RLSKTEEL-------R----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 238 ~-~p~~~~~l-------~----~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+ +++..... . ....++..+.+++.+||..||.+||++.+++++-
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l 270 (289)
T 4fvq_A 215 GDKPLSALDSQRKLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDL 270 (289)
T ss_dssp TCCTTTTSCHHHHHHHHHTTCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred CCCCccccchHHHHHHhhccCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 5 44432111 1 1234677899999999999999999999999874
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-33 Score=300.67 Aligned_cols=238 Identities=13% Similarity=0.174 Sum_probs=186.9
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcE--EEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPV--SIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENID 94 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~V--aIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~ 94 (778)
.+|++.+.||.|+ | +||+|+++.+|..+ +||.+.... .....+.+.+|+++|+++ +||||++++++++.+
T Consensus 25 ~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~--- 98 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFG--QVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR--- 98 (327)
T ss_dssp GGCEEEEEEECGGGC--EEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEET---
T ss_pred HHccceeeeecCCCc--eEEEEEEccCCcccceeeeeecccc-chHHHHHHHHHHHHHHhccCCCchhhhceeeeeC---
Confidence 3799999999998 8 99999999888865 999987532 223455688999999999 899999999999874
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCc-------------CCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCC
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGL-------------EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSS 159 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~-------------~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~N 159 (778)
..+||||||+ ++|.+++..... ........+..++.||+.||.|||+ .+++||||||+|
T Consensus 99 -----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~ivH~dlkp~N 172 (327)
T 1fvr_A 99 -----GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ-KQFIHRDLAARN 172 (327)
T ss_dssp -----TEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGG
T ss_pred -----CceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh-CCccCCCCccce
Confidence 4899999999 489999986531 1223345567779999999999996 899999999999
Q ss_pred eEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CC
Q 004025 160 VVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GM 238 (778)
Q Consensus 160 I~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~ 238 (778)
|+++.+|.+||+|||++....... .......+..|+|||++.+ ..++.++|+|||||++|||++ |.
T Consensus 173 Il~~~~~~~kL~Dfg~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~ellt~g~ 239 (327)
T 1fvr_A 173 ILVGENYVAKIADFGLSRGQEVYV-------KKTMGRLPVRWMAIESLNY------SVYTTNSDVWSYGVLLWEIVSLGG 239 (327)
T ss_dssp EEECGGGCEEECCTTCEESSCEEC-------CC----CCTTTCCHHHHHH------CEECHHHHHHHHHHHHHHHHTTSC
T ss_pred EEEcCCCeEEEcccCcCccccccc-------cccCCCCCccccChhhhcc------ccCCchhcchHHHHHHHHHHcCCC
Confidence 999999999999999987443211 0111233458999999875 345679999999999999998 98
Q ss_pred CCCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 239 RLSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 239 ~p~~~~~l~-------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.||...... ....+|..+.+++.+||..+|.+||++.+++++-
T Consensus 240 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L 295 (327)
T 1fvr_A 240 TPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSL 295 (327)
T ss_dssp CTTTTCCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCCCcHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 888543211 1135677899999999999999999999998764
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-32 Score=290.20 Aligned_cols=241 Identities=12% Similarity=0.046 Sum_probs=188.3
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
..+|++.+.||.|+ | +||+|+++.+++.|+||++......+ .+.+|+++++.++|++++..+..+..+
T Consensus 8 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~~l~~l~~~~~i~~~~~~~~~----- 76 (296)
T 4hgt_A 8 GNRYRLGRKIGSGSFG--DIYLGTDIAAGEEVAIKLECVKTKHP----QLHIESKIYKMMQGGVGIPTIRWCGAE----- 76 (296)
T ss_dssp ---CEEEEEEEECSSS--EEEEEEETTTTEEEEEEEEEC---CC----CHHHHHHHHHHHTTSTTCCCEEEEEEE-----
T ss_pred CCceEEeeeecCCCCe--EEEEEEEcCCCceEEEEeecccccch----HHHHHHHHHHHhcCCCCCCeeeeecCC-----
Confidence 35799999999998 8 99999999999999999987653332 477899999999999888887777543
Q ss_pred CcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEE---cCCCcEEEEe
Q 004025 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV---TQTLDWKLHA 172 (778)
Q Consensus 97 ~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v---~~~g~~KL~d 172 (778)
....||||||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||++ +.++.+||+|
T Consensus 77 --~~~~~lv~e~~~~~L~~~~~~~~~~--~~~~~~~~i~~qi~~~l~~LH~-~~ivH~Dlkp~NIl~~~~~~~~~~kL~D 151 (296)
T 4hgt_A 77 --GDYNVMVMELLGPSLEDLFNFCSRK--FSLKTVLLLADQMISRIEYIHS-KNFIHRDVKPDNFLMGLGKKGNLVYIID 151 (296)
T ss_dssp --TTEEEEEEECCCCBHHHHHHHTTSC--CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECCGGGTTCEEECC
T ss_pred --CCceEEEEEccCCCHHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeeeeccCCCCeEEEec
Confidence 34899999999 5799998854322 2344566779999999999996 899999999999999 7899999999
Q ss_pred cccccccCCCCCCCCCCccc-cccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh-----
Q 004025 173 FDVLSEFDGNNEAANGPMLQ-YAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----- 246 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~-~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----- 246 (778)
||++............++.. ....++..|+|||++.+ ..++.++|+|||||++|+|++|..||.....
T Consensus 152 fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 225 (296)
T 4hgt_A 152 FGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLG------IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ 225 (296)
T ss_dssp CTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTT------CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSS
T ss_pred CccceeccCcccCccCCCCcccccCCCccccchHHhcC------CCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhh
Confidence 99998876543211111111 12344558999999886 3567899999999999999999998854210
Q ss_pred ----------h-----ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 247 ----------R-----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 247 ----------~-----~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. ....+|..+.+++.+||+.+|.+||++.++++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~ 274 (296)
T 4hgt_A 226 KYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQL 274 (296)
T ss_dssp HHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHH
T ss_pred hhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHH
Confidence 0 014678899999999999999999999998864
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-32 Score=300.45 Aligned_cols=249 Identities=10% Similarity=0.076 Sum_probs=189.8
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCC-----CCcEEEEEEeCCCCch-hH--------HHHHHHHHHHHhcCCCCCe
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDD-----GSPVSIFSISGTNAQD-GH--------LAAARNGVKRLRTVRHPNI 81 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~-----g~~VaIK~~~~~~~~~-~~--------~~~~~~ev~~Lk~LrHPnI 81 (778)
....|++++.||.|+ | +||+|+++.+ ++.|+||++....... .. ......|+..++.++||||
T Consensus 33 ~~~~y~~~~~lG~G~~g--~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~i 110 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFG--CIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGV 110 (364)
T ss_dssp TCCEEEEEEECCCC-CC--EEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCS
T ss_pred CCCeEEEEEEEecCCCe--EEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCC
Confidence 345799999999998 8 9999999865 5899999998653211 00 1123356667888999999
Q ss_pred eeEeeeeEecccccCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCe
Q 004025 82 LAFLHSTEVENIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSV 160 (778)
Q Consensus 82 lk~~d~~e~e~~~g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI 160 (778)
+++++++..+..+ ..++||||||+ ++|.+++..... ......+..++.||+.||.|||+ .+|+||||||+||
T Consensus 111 v~~~~~~~~~~~~----~~~~~lv~e~~g~~L~~~~~~~~~--~l~~~~~~~i~~qi~~~l~~lH~-~~iiHrDlkp~Ni 183 (364)
T 3op5_A 111 PKYWGSGLHDKNG----KSYRFMIMDRFGSDLQKIYEANAK--RFSRKTVLQLSLRILDILEYIHE-HEYVHGDIKASNL 183 (364)
T ss_dssp CCEEEEEEEEETT----EEEEEEEEECEEEEHHHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGE
T ss_pred CeEEeeeeeccCC----cceEEEEEeCCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHH-CCeEEecCCHHHE
Confidence 9999999865322 35799999999 579999887532 12344566779999999999996 8999999999999
Q ss_pred EEc--CCCcEEEEecccccccCCCCCCCCCCc-cccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhC
Q 004025 161 VVT--QTLDWKLHAFDVLSEFDGNNEAANGPM-LQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237 (778)
Q Consensus 161 ~v~--~~g~~KL~dFgla~~~~~~~~~~~~~~-~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg 237 (778)
+++ .+|.+||+|||+++.+........... ......++..|+|||++.+ ..++.++|+|||||++|||++|
T Consensus 184 ll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~~g 257 (364)
T 3op5_A 184 LLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNG------VAPSRRGDLEILGYCMIQWLTG 257 (364)
T ss_dssp EEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTT------CCCCHHHHHHHHHHHHHHHHHS
T ss_pred EEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCC------CCCCchhhHHHHHHHHHHHHhC
Confidence 999 889999999999987754322111100 1122335669999999886 3578899999999999999999
Q ss_pred CCCCChhh----------------hhc-------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 238 MRLSKTEE----------------LRN-------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 238 ~~p~~~~~----------------l~~-------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
..||.... +.. ...+|..+..++.+|+..+|..||++.++++.
T Consensus 258 ~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~ 323 (364)
T 3op5_A 258 HLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRDI 323 (364)
T ss_dssp CCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHH
T ss_pred CCCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence 99986421 000 04678899999999999999999999988753
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-33 Score=302.28 Aligned_cols=241 Identities=16% Similarity=0.182 Sum_probs=182.8
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcE----EEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEe
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPV----SIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~V----aIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~ 90 (778)
+...+|++.+.||.|+ | +||+|+++.+++.| ++|.+.... .....+.+.+|+++++.++||||+++++++..
T Consensus 12 l~~~~y~~~~~lG~G~~g--~Vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 88 (327)
T 3poz_A 12 LKETEFKKIKVLGSGAFG--TVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLT 88 (327)
T ss_dssp CCGGGEEEEEEEEEETTE--EEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEES
T ss_pred cCHHHcccceEEeeCCCe--EEEEEEEcCCCceEEEEEEEeeccccc-CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec
Confidence 3456799999999998 8 99999998888765 666665332 22345678899999999999999999999985
Q ss_pred cccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcE
Q 004025 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDW 168 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~ 168 (778)
. ..++|+||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+
T Consensus 89 ~---------~~~~v~e~~~~g~L~~~l~~~~~~--~~~~~~~~~~~qi~~~l~~LH~-~~ivH~Dikp~NIll~~~~~~ 156 (327)
T 3poz_A 89 S---------TVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNYLED-RRLVHRDLAARNVLVKTPQHV 156 (327)
T ss_dssp S---------SEEEEEECCTTCBHHHHHHHSTTS--CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEEEETTEE
T ss_pred C---------CeEEEEEecCCCcHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHhh-CCeeCCCCChheEEECCCCCE
Confidence 3 478889998 5799998874321 2334456679999999999996 899999999999999999999
Q ss_pred EEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh
Q 004025 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR 247 (778)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~ 247 (778)
||+|||+++........ .......++..|+|||++.+ ..++.++|+|||||++|||++ |..||......
T Consensus 157 kl~Dfg~a~~~~~~~~~----~~~~~~~~t~~y~aPE~~~~------~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~ 226 (327)
T 3poz_A 157 KITDFGLAKLLGAEEKE----YHAEGGKVPIKWMALESILH------RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 226 (327)
T ss_dssp EECCTTHHHHHTTTCC-----------CCCGGGSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG
T ss_pred EEccCcceeEccCCccc----ccccCCCccccccChHHhcc------CCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH
Confidence 99999999877543211 11112223448999999876 367789999999999999999 88888643211
Q ss_pred c-------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 N-------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ~-------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ...++..+..++.+||..+|.+||++.+++++-
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l 273 (327)
T 3poz_A 227 EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEF 273 (327)
T ss_dssp GHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHH
Confidence 1 124566788999999999999999999998764
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-32 Score=291.18 Aligned_cols=241 Identities=15% Similarity=0.161 Sum_probs=187.4
Q ss_pred CCCCCCceeccCCCCCC-CceEEEEeEECCC---CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEe
Q 004025 15 GVKDLPYNIGDPYPSAW-GSWSHFQGTSKDD---GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (778)
Q Consensus 15 ~~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~---g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~ 90 (778)
++...+|++.+.||.|+ | +||+|+++.+ +..|+||++.... .....+.+.+|+++++.|+||||++++++++.
T Consensus 8 ~~~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 84 (281)
T 3cc6_A 8 GIAREDVVLNRILGEGFFG--EVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE 84 (281)
T ss_dssp SCCGGGEEEEEEEEECSSS--EEEEEEEECTTCCEEEEEEEECCTTS-CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS
T ss_pred eecccceEEEEEEEecCCe--eEEEeEEcCCCCCcceEEEEeccccc-CchHHHHHHHHHHHHHhCCCCCcceEEEEEcC
Confidence 44556899999999998 8 9999987543 3459999987653 33456778999999999999999999999864
Q ss_pred cccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcE
Q 004025 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDW 168 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~ 168 (778)
+ ..|+||||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+
T Consensus 85 ~---------~~~~v~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~Nil~~~~~~~ 152 (281)
T 3cc6_A 85 E---------PTWIIMELYPYGELGHYLERNKNS--LKVLTLVLYSLQICKAMAYLES-INCVHRDIAVRNILVASPECV 152 (281)
T ss_dssp S---------SCEEEEECCTTCBHHHHHHHHTTT--CCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCSGGGEEEEETTEE
T ss_pred C---------CCEEEEecCCCCCHHHHHHhcccc--CCHHHHHHHHHHHHHHHHHHHH-CCcccCCCccceEEECCCCcE
Confidence 2 468999999 4799999775421 2334456679999999999996 899999999999999999999
Q ss_pred EEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh-
Q 004025 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL- 246 (778)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l- 246 (778)
||+|||++.......... .....++..|+|||++.+ ..++.++|+|||||++|+|++ |..||.....
T Consensus 153 kl~Dfg~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~ 221 (281)
T 3cc6_A 153 KLGDFGLSRYIEDEDYYK-----ASVTRLPIKWMSPESINF------RRFTTASDVWMFAVCMWEILSFGKQPFFWLENK 221 (281)
T ss_dssp EECCCCGGGCC--------------CCCCCGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG
T ss_pred EeCccCCCcccccccccc-----cccCCCCcceeCchhhcc------CCCCchhccHHHHHHHHHHHhCCCCCcccCChH
Confidence 999999998765422110 111123347999999875 356789999999999999998 8888742211
Q ss_pred ------------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 ------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ------------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....+|..+.+++.+||..+|.+||++.+++++-
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L 268 (281)
T 3cc6_A 222 DVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSL 268 (281)
T ss_dssp GHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHH
Confidence 11234677799999999999999999999998764
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-33 Score=300.65 Aligned_cols=240 Identities=16% Similarity=0.190 Sum_probs=183.5
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcE----EEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEe
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPV----SIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~V----aIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~ 90 (778)
+...+|++.+.||.|+ | +||+|+++.+++.| ++|.+.... .....+.+.+|+++++.++||||+++++++..
T Consensus 12 l~~~~y~~~~~lG~G~~g--~Vy~~~~~~~~~~~~~kv~iK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 88 (327)
T 3lzb_A 12 LKETEFKKIKVLGSGAFG--TVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLT 88 (327)
T ss_dssp CCTTTEEEEEEEEECSSE--EEEEEEECCTTCSCCEEEEEEEECCCS-SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES
T ss_pred cCHhHceEEEEeeeCCCe--EEEEEEEcCCCceEEEEEEEEeecccc-CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec
Confidence 3567899999999998 8 99999999888876 555554332 22345678899999999999999999999985
Q ss_pred cccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcE
Q 004025 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDW 168 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~ 168 (778)
+ ..++|+|++ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+
T Consensus 89 ~---------~~~~v~~~~~~g~L~~~l~~~~~~--~~~~~~~~i~~qi~~aL~~LH~-~~ivH~Dikp~NIl~~~~~~~ 156 (327)
T 3lzb_A 89 S---------TVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNYLED-RRLVHRDLAARNVLVKTPQHV 156 (327)
T ss_dssp S---------SEEEEECCCSSCBHHHHHHHTTTC--CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEEEETTEE
T ss_pred C---------CceEEEEecCCCcHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHhh-CCCcCCCCCHHHEEEcCCCCE
Confidence 3 478889998 5799998875421 2344466679999999999996 899999999999999999999
Q ss_pred EEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh
Q 004025 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR 247 (778)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~ 247 (778)
||+|||++......... .......++..|+|||++.+ ..++.++|+|||||++|||++ |..||......
T Consensus 157 kL~DfG~a~~~~~~~~~----~~~~~~~~t~~y~aPE~~~~------~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~ 226 (327)
T 3lzb_A 157 KITDFGLAKLLGAEEKE----YHAEGGKVPIKWMALESILH------RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 226 (327)
T ss_dssp EECCTTC--------------------CCCGGGSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG
T ss_pred EEccCcceeEccCcccc----ccccCCCccccccCHHHHcC------CCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH
Confidence 99999999876543211 11112223447999999876 367789999999999999999 88888643211
Q ss_pred -------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 -------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 -------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+|..+..++++||..+|.+||++.++++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 272 (327)
T 3lzb_A 227 EISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIE 272 (327)
T ss_dssp GHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 113456778999999999999999999999875
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-32 Score=289.57 Aligned_cols=241 Identities=12% Similarity=0.048 Sum_probs=191.2
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
..+|++.+.||.|+ | +||+|+++.+|+.|+||++......+ .+.+|+++++.++|++++..+..+..+
T Consensus 8 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~~l~~l~~~~~i~~~~~~~~~----- 76 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFG--DIYLGTDIAAGEEVAIKLECVKTKHP----QLHIESKIYKMMQGGVGIPTIRWCGAE----- 76 (296)
T ss_dssp TTTEEEEEEEEEETTE--EEEEEEETTTTEEEEEEEEESCSSCC----HHHHHHHHHHHHTTSTTCCCEEEEEEE-----
T ss_pred ccEEEEEEEEccCCCe--EEEEEEEcCCCcEEEEEEecCCcchh----HHHHHHHHHHHhhcCCCCCccccccCC-----
Confidence 35799999999998 8 99999999999999999998654332 478999999999999887777766543
Q ss_pred CcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEc---CCCcEEEEe
Q 004025 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT---QTLDWKLHA 172 (778)
Q Consensus 97 ~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~---~~g~~KL~d 172 (778)
...+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++ .++.+||+|
T Consensus 77 --~~~~~lv~e~~~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~dlkp~NIl~~~~~~~~~~kl~D 151 (296)
T 3uzp_A 77 --GDYNVMVMELLGPSLEDLFNFCSR--KFSLKTVLLLADQMISRIEYIHS-KNFIHRDVKPDNFLMGLGKKGNLVYIID 151 (296)
T ss_dssp --TTEEEEEEECCCCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHH-TTEECSCCCGGGEEECCGGGTTCEEECC
T ss_pred --CCceEEEEEecCCCHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHh-CCeeeCCCCHHHeEEecCCCCCeEEEee
Confidence 34899999999 579999975432 12344566779999999999996 8999999999999994 889999999
Q ss_pred cccccccCCCCCCCCCCcc-ccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh------
Q 004025 173 FDVLSEFDGNNEAANGPML-QYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE------ 245 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~-~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~------ 245 (778)
||++............+.. .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||....
T Consensus 152 fg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 225 (296)
T 3uzp_A 152 FGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLG------IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ 225 (296)
T ss_dssp CTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTT------CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSS
T ss_pred CCCcccccccccccccccccccccccccccCChhhhcC------CCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhh
Confidence 9999887654321111111 122345568999999886 356789999999999999999999886411
Q ss_pred -h--------hc-----cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 246 -L--------RN-----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 246 -l--------~~-----~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
+ .. ...+|..+.+++.+||+.||.+||++.++++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 274 (296)
T 3uzp_A 226 KYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQL 274 (296)
T ss_dssp HHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHH
T ss_pred hhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHH
Confidence 0 00 14678899999999999999999999988764
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-32 Score=305.64 Aligned_cols=244 Identities=16% Similarity=0.226 Sum_probs=193.5
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCC-------CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEee
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDD-------GSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLH 86 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~-------g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d 86 (778)
+...+|.+++.||.|+ | +||+|++... +..|+||++... ........+.+|+++++.+ +||||+++++
T Consensus 66 i~~~~y~i~~~LG~G~~g--~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~ 142 (382)
T 3tt0_A 66 LPRDRLVLGKPLGEGAFG--QVVLAEAIGLDKDKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLG 142 (382)
T ss_dssp CCGGGEEEEEEEEECSSE--EEEEEEEETSSTTCTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred cchhheEeeeEEecCCCe--EEEEEEEccccccccccceEEEEEeeccc-cCHHHHHHHHHHHHHHHHhcCCchhhhhee
Confidence 3445799999999998 8 9999997533 357999999765 3344567789999999999 8999999999
Q ss_pred eeEecccccCCcccEEEEEecCC--cChHHHHHHhCcC-------------CCcchHHHHHHHHHHHHHHHHHHcCCCcc
Q 004025 87 STEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLV 151 (778)
Q Consensus 87 ~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~-------------~~~~~~~i~~gl~QI~~aL~fLH~~~~iv 151 (778)
++..+ ..+||||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++
T Consensus 143 ~~~~~--------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~iv 213 (382)
T 3tt0_A 143 ACTQD--------GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS-KKCI 213 (382)
T ss_dssp EECSS--------SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHH-TTCC
T ss_pred eeccC--------CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh-CCEe
Confidence 99864 3789999999 4899999876521 123345566779999999999996 8999
Q ss_pred ccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHH
Q 004025 152 HGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLI 231 (778)
Q Consensus 152 H~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~li 231 (778)
||||||+||+++.+|.+||+|||++........... .....++..|+|||++.+ ..++.++|+|||||++
T Consensus 214 H~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~----~~~~~~t~~y~aPE~~~~------~~~~~~~DiwslG~il 283 (382)
T 3tt0_A 214 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK----TTNGRLPVKWMAPEALFD------RIYTHQSDVWSFGVLL 283 (382)
T ss_dssp CSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCC----CTTCCCGGGGSCHHHHHS------CCCCHHHHHHHHHHHH
T ss_pred cCCCCcceEEEcCCCcEEEcccCccccccccccccc----ccCCCCCcceeCHHHhcC------CCCCchhHHHHHHHHH
Confidence 999999999999999999999999987654321110 111223457999999876 3577899999999999
Q ss_pred HHHHh-CCCCCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 232 YELFS-GMRLSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 232 yel~t-g~~p~~~~~l~-------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
|+|++ |..||...... ....++..+..++.+||..+|.+||++.+++++.
T Consensus 284 ~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L 347 (382)
T 3tt0_A 284 WEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 347 (382)
T ss_dssp HHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 99999 88887543211 1235677899999999999999999999998764
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-33 Score=304.24 Aligned_cols=243 Identities=16% Similarity=0.152 Sum_probs=188.3
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEEC-----CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeE
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSK-----DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTE 89 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k-----~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e 89 (778)
...+|++++.||.|+ | +||+|++. .++..|+||++..... ....+.+.+|+++|++| +||||+++++++.
T Consensus 43 ~~~~y~~~~~lG~G~~g--~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 119 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFG--KVMNATAYGISKTGVSIQVAVKMLKEKAD-SSEREALMSELKMMTQLGSHENIVNLLGACT 119 (344)
T ss_dssp CGGGEEEEEEEEECSSE--EEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred CHHHceeeeeecCCCCc--eeEEeeeeccccCCcceEEEEEecccccC-HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 345789999999998 8 99999973 4567899999975432 23456788999999999 8999999999998
Q ss_pred ecccccCCcccEEEEEecCC--cChHHHHHHhCcC--------------------CCcchHHHHHHHHHHHHHHHHHHcC
Q 004025 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLE--------------------GSQRDEYYAWGLNQIAKAVSFLNND 147 (778)
Q Consensus 90 ~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~--------------------~~~~~~~i~~gl~QI~~aL~fLH~~ 147 (778)
.. ..+||||||+ ++|.+++...... .......+..++.||+.||.|||+
T Consensus 120 ~~--------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~- 190 (344)
T 1rjb_A 120 LS--------GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF- 190 (344)
T ss_dssp SS--------SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH-
T ss_pred eC--------CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh-
Confidence 64 3789999999 4899999865421 112334466679999999999996
Q ss_pred CCccccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHH
Q 004025 148 CKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGL 227 (778)
Q Consensus 148 ~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSL 227 (778)
.+++||||||+||+++.+|.+||+|||++........ ........++..|+|||++.+ ..++.++|+|||
T Consensus 191 ~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~----~~~~~~~~~t~~y~aPE~~~~------~~~~~~~Di~sl 260 (344)
T 1rjb_A 191 KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN----YVVRGNARLPVKWMAPESLFE------GIYTIKSDVWSY 260 (344)
T ss_dssp TTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTT----SEEETTEEECGGGCCHHHHHH------CCCCHHHHHHHH
T ss_pred CCcccCCCChhhEEEcCCCcEEeCCCccCcccccCcc----ceeccCccCccCccCHHHhcc------CCCChhHhHHHH
Confidence 8999999999999999999999999999987654211 111112233447999999876 356789999999
Q ss_pred HHHHHHHHh-CCCCCChhhh--------h------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 228 GCLIYELFS-GMRLSKTEEL--------R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 228 G~liyel~t-g~~p~~~~~l--------~------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
||++|+|++ |..||..... . ....+|..+..++.+||..||.+||++.+++++.
T Consensus 261 G~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l 329 (344)
T 1rjb_A 261 GILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 329 (344)
T ss_dssp HHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence 999999998 8888754211 1 1134677899999999999999999999998864
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-33 Score=294.01 Aligned_cols=245 Identities=17% Similarity=0.196 Sum_probs=183.5
Q ss_pred CCCCCCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEe
Q 004025 12 SGAGVKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (778)
Q Consensus 12 s~~~~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~ 90 (778)
....+....|++++.||.|+ | +||+|+.+ ..|+||++..........+.+.+|+++|+.++||||++++++...
T Consensus 17 ~~~ei~~~~y~~~~~lG~G~~g--~Vy~~~~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 91 (289)
T 3og7_A 17 DDWEIPDGQITVGQRIGSGSFG--TVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 91 (289)
T ss_dssp -CCBCCTTSCEEEEEEEECSSE--EEEEEESS---SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred CCCccCccceeeeeEecCCCCe--EEEEEEEc---CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccC
Confidence 34467788999999999998 8 99999865 359999998766666667889999999999999999999996542
Q ss_pred cccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcE
Q 004025 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDW 168 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~ 168 (778)
..+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+
T Consensus 92 ---------~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~L~~lH~-~~i~H~Dlkp~Nil~~~~~~~ 159 (289)
T 3og7_A 92 ---------PQLAIVTQWCEGSSLYHHLHASET--KFEMKKLIDIARQTARGMDYLHA-KSIIHRDLKSNNIFLHEDNTV 159 (289)
T ss_dssp ---------SSCEEEEECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEEETTTEE
T ss_pred ---------CccEEEEEecCCCcHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHh-CCcccccCccceEEECCCCCE
Confidence 3689999999 579888854331 12334456679999999999996 899999999999999999999
Q ss_pred EEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh---
Q 004025 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE--- 245 (778)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~--- 245 (778)
||+|||++......... .......++..|+|||++...- ...++.++|+|||||++|+|++|..||....
T Consensus 160 kl~Dfg~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~---~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~ 232 (289)
T 3og7_A 160 KIGDFGLATEKSRWSGS----HQFEQLSGSILWMAPEVIRMQD---SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 232 (289)
T ss_dssp EECCCC----------------------CCCTTCCHHHHC-------CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH
T ss_pred EEccceecccccccccc----ccccccCCCccccCchhhcccC---CCCCCcccchHHHHHHHHHHHHCCCCccccchHH
Confidence 99999999766432111 0111223456899999986210 0345678999999999999999999885311
Q ss_pred -hh--------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 246 -LR--------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 246 -l~--------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
+. ....+|+.+.+++.+||..+|.+||++.++++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~ 282 (289)
T 3og7_A 233 QIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAE 282 (289)
T ss_dssp HHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 10 013567889999999999999999999999865
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-33 Score=295.76 Aligned_cols=239 Identities=14% Similarity=0.153 Sum_probs=186.8
Q ss_pred CCCceecc-CCCCCC-CceEEEEeE--ECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 18 DLPYNIGD-PYPSAW-GSWSHFQGT--SKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 18 ~~~Y~i~~-~lg~g~-g~w~Vy~g~--~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
...|++.+ .||.|+ | +||+|. .+.++..|+||++..........+.+.+|+++++.++||||++++++++.
T Consensus 15 ~~~y~~~~~~lg~G~~g--~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--- 89 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFG--TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA--- 89 (291)
T ss_dssp GGGEEEEEEEEEECSSE--EEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES---
T ss_pred chhhhhccCccccccCe--eeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECC---
Confidence 45799998 899998 7 999994 46678899999998654444556789999999999999999999999853
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
..+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+
T Consensus 90 ------~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~LH~-~~i~H~dikp~Nil~~~~~~~kl~ 159 (291)
T 1xbb_A 90 ------ESWMLVMEMAELGPLNKYLQQNRH---VKDKNIIELVHQVSMGMKYLEE-SNFVHRDLAARNVLLVTQHYAKIS 159 (291)
T ss_dssp ------SSEEEEEECCTTEEHHHHHHHCTT---CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEEEETTEEEEC
T ss_pred ------CCcEEEEEeCCCCCHHHHHHhCcC---CCHHHHHHHHHHHHHHHHHHHh-CCeEcCCCCcceEEEeCCCcEEEc
Confidence 2689999999 479999987542 2344566779999999999996 899999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh---
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR--- 247 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~--- 247 (778)
|||++........... ......++..|+|||++.+. .++.++|+|||||++|+|++ |..||......
T Consensus 160 Dfg~~~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~ 230 (291)
T 1xbb_A 160 DFGLSKALRADENYYK---AQTHGKWPVKWYAPECINYY------KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 230 (291)
T ss_dssp CCTTCEECCTTCSEEE---C----CCCGGGCCHHHHHHC------EEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH
T ss_pred cCCcceeeccCCCccc---ccccCCCCceeeChHHhccC------CCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHH
Confidence 9999987754321100 01111223479999998752 45678999999999999999 88888542111
Q ss_pred ----------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 ----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 ----------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+|..+.+++.+||+.||.+||++.++++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 273 (291)
T 1xbb_A 231 AMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELR 273 (291)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred HHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 113567789999999999999999999999875
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-33 Score=305.52 Aligned_cols=238 Identities=13% Similarity=0.123 Sum_probs=188.4
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch---------------hHHHHHHHHHHHHhcCCCCCe
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD---------------GHLAAARNGVKRLRTVRHPNI 81 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~---------------~~~~~~~~ev~~Lk~LrHPnI 81 (778)
..+|++.+.||.|+ | +||.|++ +|+.|+||++....... ...+.+.+|+++++.|+||||
T Consensus 30 ~~~y~~~~~lg~G~~g--~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 105 (348)
T 2pml_X 30 INDYRIIRTLNQGKFN--KIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYC 105 (348)
T ss_dssp ETTEEEEEEEECCSSC--CEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTB
T ss_pred cCceEEEEEEcCCCCe--EEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCc
Confidence 35899999999998 8 8999998 89999999998532111 112678999999999999999
Q ss_pred eeEeeeeEecccccCCcccEEEEEecCC--cChHHH------HHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCcccc
Q 004025 82 LAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEK------IKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHG 153 (778)
Q Consensus 82 lk~~d~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~------L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~ 153 (778)
+++++++..+ ..+|+||||+ ++|.++ +.... ........+..++.||+.||.|||++.+++||
T Consensus 106 ~~~~~~~~~~--------~~~~lv~e~~~~~~L~~~~~~~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~ 176 (348)
T 2pml_X 106 LTCEGIITNY--------DEVYIIYEYMENDSILKFDEYFFVLDKNY-TCFIPIQVIKCIIKSVLNSFSYIHNEKNICHR 176 (348)
T ss_dssp CCCSEEEESS--------SEEEEEEECCTTCBSSEESSSEESSCSSS-CCCCCHHHHHHHHHHHHHHHHHHHHTSCEECC
T ss_pred ceEEEEEeeC--------CeEEEEEeccCCCcHHHHHHHhhhhhhcc-ccCCCHHHHHHHHHHHHHHHHHHhccCCEeec
Confidence 9999999864 3899999999 478877 43311 12233455667799999999999954899999
Q ss_pred ccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCC-cchhHHHHHHHH
Q 004025 154 NVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPW-SIDSWGLGCLIY 232 (778)
Q Consensus 154 dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~-~~DiwSLG~liy 232 (778)
||||+||+++.+|.+||+|||++....... .....++..|+|||++.+. ..+.. ++|+|||||++|
T Consensus 177 dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~-----~~~~~~~~Di~slG~il~ 243 (348)
T 2pml_X 177 DVKPSNILMDKNGRVKLSDFGESEYMVDKK--------IKGSRGTYEFMPPEFFSNE-----SSYNGAKVDIWSLGICLY 243 (348)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCEECBTTE--------ECSSCSCGGGCCGGGGSSC-----CCEEHHHHHHHHHHHHHH
T ss_pred CCChHhEEEcCCCcEEEecccccccccccc--------ccCCCCCcCccCchhhcCC-----CCCCcchhhHHHHHHHHH
Confidence 999999999999999999999998765421 1122345589999998763 12333 899999999999
Q ss_pred HHHhCCCCCChhhh-----hcc---------------------------CCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 233 ELFSGMRLSKTEEL-----RNT---------------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 233 el~tg~~p~~~~~l-----~~~---------------------------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
||++|..||..... ..+ ..+|..+.+++.+||..||.+||++.++++|
T Consensus 244 ~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 244 VMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHhCCCCCCCCCcHHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 99999988853211 000 3467778999999999999999999999999
Q ss_pred c
Q 004025 281 S 281 (778)
Q Consensus 281 ~ 281 (778)
+
T Consensus 324 p 324 (348)
T 2pml_X 324 E 324 (348)
T ss_dssp G
T ss_pred c
Confidence 8
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-33 Score=297.95 Aligned_cols=244 Identities=16% Similarity=0.195 Sum_probs=192.5
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEE-----CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeE
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTS-----KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTE 89 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~-----k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e 89 (778)
...+|++++.||.|+ | +||+|++ +.+++.|+||++.... .....+.+.+|+++|+++ +||||+++++++.
T Consensus 25 ~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 101 (316)
T 2xir_A 25 PRDRLKLGKPLGRGAFG--QVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACT 101 (316)
T ss_dssp CGGGEEEEEEEEECSSE--EEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred chhheeeeeEEcCCCce--eEEEEEEecCCccccceEEEEEecccCC-CcHHHHHHHHHHHHHHhcccCCCeeeEEEEEe
Confidence 345799999999998 8 9999984 4567899999997653 334456789999999999 6999999999987
Q ss_pred ecccccCCcccEEEEEecCC--cChHHHHHHhCcC-------------CCcchHHHHHHHHHHHHHHHHHHcCCCccccc
Q 004025 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154 (778)
Q Consensus 90 ~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~-------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~d 154 (778)
.+. ..+|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++|||
T Consensus 102 ~~~-------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~i~H~d 173 (316)
T 2xir_A 102 KPG-------GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS-RKCIHRD 173 (316)
T ss_dssp CTT-------SCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHH-TTCCCSC
T ss_pred cCC-------CceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHh-CCccccc
Confidence 542 3689999999 4799999875421 112344566779999999999996 8999999
Q ss_pred cCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHH
Q 004025 155 VCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYEL 234 (778)
Q Consensus 155 Lkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel 234 (778)
|||+||+++.+|.+||+|||++........ ........++..|+|||++.+ ..++.++|+|||||++|+|
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~----~~~~~~~~~t~~y~aPE~~~~------~~~~~~~Di~slG~il~~l 243 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDPD----YVRKGDARLPLKWMAPETIFD------RVYTIQSDVWSFGVLLWEI 243 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTT----SEEETTEEECGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHH
T ss_pred CccceEEECCCCCEEECCCccccccccCcc----ceeccCCCcceeecCchhhcc------ccccchhHHHHHHHHHHHH
Confidence 999999999999999999999987654321 111112233457999999876 3577899999999999999
Q ss_pred Hh-CCCCCChhhh--------h------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 235 FS-GMRLSKTEEL--------R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 235 ~t-g~~p~~~~~l--------~------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
++ |..||..... . ....++..+.+++.+||..||.+||++.+++++.
T Consensus 244 ~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L 305 (316)
T 2xir_A 244 FSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305 (316)
T ss_dssp HTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HhCCCCCCcccchhHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 98 8888754211 0 1134677899999999999999999999999874
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-33 Score=300.63 Aligned_cols=244 Identities=16% Similarity=0.241 Sum_probs=190.7
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEEC-------CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEee
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSK-------DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLH 86 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k-------~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d 86 (778)
+...+|++++.||.|+ | +||+|++. .++..|+||++.... .......+.+|+++++++ +||||+++++
T Consensus 32 ~~~~~y~~~~~lG~G~~g--~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 108 (334)
T 2pvf_A 32 FPRDKLTLGKPLGEGAFG--QVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLG 108 (334)
T ss_dssp CCGGGEEEEEEEEECSSC--EEEEEEETTCSTTCC---CEEEEEECCTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred CCHhHeEEeeEEeecCce--eEEEeEeccccccccccceEEEEeeeccCC-cHHHHHHHHHHHHHHHHhhcCCCEeeEEE
Confidence 3445799999999998 8 99999975 457789999997543 334567789999999999 8999999999
Q ss_pred eeEecccccCCcccEEEEEecCC--cChHHHHHHhCcC-------------CCcchHHHHHHHHHHHHHHHHHHcCCCcc
Q 004025 87 STEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLV 151 (778)
Q Consensus 87 ~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~-------------~~~~~~~i~~gl~QI~~aL~fLH~~~~iv 151 (778)
++..+ ..+||||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++
T Consensus 109 ~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~iv 179 (334)
T 2pvf_A 109 ACTQD--------GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS-QKCI 179 (334)
T ss_dssp EECSS--------SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHH-TTEE
T ss_pred EEccC--------CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh-CCee
Confidence 99763 3789999999 4899999875421 112334466679999999999996 8999
Q ss_pred ccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHH
Q 004025 152 HGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLI 231 (778)
Q Consensus 152 H~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~li 231 (778)
||||||+||+++.+|.+||+|||++........... .....++..|+|||++.+ ..++.++|+|||||++
T Consensus 180 H~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il 249 (334)
T 2pvf_A 180 HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK----TTNGRLPVKWMAPEALFD------RVYTHQSDVWSFGVLM 249 (334)
T ss_dssp CSCCSGGGEEECTTCCEEECCCTTCEECTTTSSEEC----CSCCCCCGGGCCHHHHHH------CEECHHHHHHHHHHHH
T ss_pred CCCCccceEEEcCCCCEEEccccccccccccccccc----cCCCCcccceeChHHhcC------CCcChHHHHHHHHHHH
Confidence 999999999999999999999999987754321100 111223347999999875 3466799999999999
Q ss_pred HHHHh-CCCCCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 232 YELFS-GMRLSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 232 yel~t-g~~p~~~~~l~-------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
|+|++ |..||...... ....+|..+..++.+||..+|.+||++.+++++-
T Consensus 250 ~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L 313 (334)
T 2pvf_A 250 WEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313 (334)
T ss_dssp HHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHhCCCCCcCcCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 99999 88887542211 1135677899999999999999999999998764
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-32 Score=297.19 Aligned_cols=244 Identities=15% Similarity=0.176 Sum_probs=183.9
Q ss_pred CCCCCCceeccCCCCCC-CceEEEEeEECCCCC----cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeE
Q 004025 15 GVKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGS----PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTE 89 (778)
Q Consensus 15 ~~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~----~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e 89 (778)
.+....|++.+.||.|+ | +||+|+.+.++. .|+||++.... .......+.+|+++++.++||||++++++++
T Consensus 40 ~i~~~~~~~~~~lG~G~~g--~Vy~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 116 (333)
T 1mqb_A 40 EIHPSCVTRQKVIGAGEFG--EVYKGMLKTSSGKKEVPVAIKTLKAGY-TEKQRVDFLGEAGIMGQFSHHNIIRLEGVIS 116 (333)
T ss_dssp BCCTTTEEEEEEEEECSSS--EEEEEEEEC---CCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred cCChHHhhcccEEecCCCe--EEEEEEEecCCCCccccEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEe
Confidence 34556799999999998 8 999999876543 59999997543 3344567889999999999999999999997
Q ss_pred ecccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCc
Q 004025 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD 167 (778)
Q Consensus 90 ~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~ 167 (778)
.. ..+||||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.
T Consensus 117 ~~--------~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~-~~ivH~Dikp~NIl~~~~~~ 185 (333)
T 1mqb_A 117 KY--------KPMMIITEYMENGALDKFLREKDG--EFSVLQLVGMLRGIAAGMKYLAN-MNYVHRDLAARNILVNSNLV 185 (333)
T ss_dssp SS--------SSEEEEEECCTTEEHHHHHHHTTT--CSCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEECTTCC
T ss_pred cC--------CCcEEEEeCCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHh-CCeeCCCCChheEEECCCCc
Confidence 63 3799999999 479999976432 12344466779999999999996 89999999999999999999
Q ss_pred EEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh
Q 004025 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL 246 (778)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l 246 (778)
+||+|||++......... ........++..|+|||++.+ ..++.++|+|||||++|||++ |..||.....
T Consensus 186 ~kl~Dfg~~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~ellt~g~~pf~~~~~ 256 (333)
T 1mqb_A 186 CKVSDFGLSRVLEDDPEA---TYTTSGGKIPIRWTAPEAISY------RKFTSASDVWSFGIVMWEVMTYGERPYWELSN 256 (333)
T ss_dssp EEECCCCC--------------------CCCGGGSCHHHHHS------CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH
T ss_pred EEECCCCcchhhcccccc---ccccCCCCccccccCchhccc------CCCCchhhhHHHHHHHHHHHcCCCCCcccCCH
Confidence 999999999877543211 111111123347999999875 356789999999999999998 8888753211
Q ss_pred -------h------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 -------R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 -------~------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ....+|..+.+++.+||..+|.+||++.++++.-
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L 304 (333)
T 1mqb_A 257 HEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSIL 304 (333)
T ss_dssp HHHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHH
T ss_pred HHHHHHHHCCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 1 1134667899999999999999999999998753
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-33 Score=301.27 Aligned_cols=243 Identities=16% Similarity=0.198 Sum_probs=190.7
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCC-----cEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeE
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGS-----PVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTE 89 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~-----~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e 89 (778)
...+|++++.||.|+ | +||+|+++.++. .|+||++.... .....+.+.+|+++|+.| +||||+++++++.
T Consensus 44 ~~~~~~~~~~lG~G~~g--~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 120 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFG--KVVEATAFGLGKEDAVLKVAVKMLKSTA-HADEKEALMSELKIMSHLGQHENIVNLLGACT 120 (333)
T ss_dssp CTTSEEEEEEEEECSSE--EEEEEEETTCSSSCCCCEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred CHHHceeeeEeccCCCc--ceEEEEecCCCcccchhHHHHHhccccc-ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 345799999999998 8 999999987765 79999997643 334467789999999999 8999999999997
Q ss_pred ecccccCCcccEEEEEecCC--cChHHHHHHhCc-----------CCCcchHHHHHHHHHHHHHHHHHHcCCCccccccC
Q 004025 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGL-----------EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156 (778)
Q Consensus 90 ~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~-----------~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLk 156 (778)
.+ ..+||||||+ ++|.+++..... ........+..++.||+.||.|||+ .+++|||||
T Consensus 121 ~~--------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~ivH~Dlk 191 (333)
T 2i1m_A 121 HG--------GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS-KNCIHRDVA 191 (333)
T ss_dssp SS--------SSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH-TTEECSCCS
T ss_pred cC--------CceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc-CCcccCCcc
Confidence 64 3789999999 489999876431 1112344566779999999999996 899999999
Q ss_pred CCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh
Q 004025 157 LSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS 236 (778)
Q Consensus 157 p~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t 236 (778)
|+||+++.+|.+||+|||++........ ........++..|+|||++.+ ..++.++|+|||||++|||++
T Consensus 192 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el~t 261 (333)
T 2i1m_A 192 ARNVLLTNGHVAKIGDFGLARDIMNDSN----YIVKGNARLPVKWMAPESIFD------CVYTVQSDVWSYGILLWEIFS 261 (333)
T ss_dssp GGGCEEEGGGEEEBCCCGGGCCGGGCTT----SEECSSCEECGGGSCHHHHHH------CCCCHHHHHHHHHHHHHHHTT
T ss_pred cceEEECCCCeEEECccccccccccccc----eeecCCCCCCccccCHHHhcc------CCCChHHHHHHHHHHHHHHHc
Confidence 9999999999999999999987644211 111111223347999999876 357789999999999999998
Q ss_pred -CCCCCChhhh--------h------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 237 -GMRLSKTEEL--------R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 237 -g~~p~~~~~l--------~------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
|..||..... . ....+|..+.+++.+||+.||..||++.+++++-
T Consensus 262 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L 321 (333)
T 2i1m_A 262 LGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 321 (333)
T ss_dssp TSCCSSTTCCSSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCCCcccchhHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHH
Confidence 7777753211 0 1134677899999999999999999999998753
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-32 Score=303.80 Aligned_cols=197 Identities=18% Similarity=0.260 Sum_probs=160.8
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CC-----CeeeEeeeeEe
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HP-----NILAFLHSTEV 90 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HP-----nIlk~~d~~e~ 90 (778)
..+|++.+.||.|+ | +||+|+++.+++.||||++... ......+.+|+++++.++ |+ +|+++++.+..
T Consensus 53 ~~~y~~~~~lG~G~~g--~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~ 127 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFG--QVVKAYDRVEQEWVAIKIIKNK---KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF 127 (382)
T ss_dssp TTTEEEEEEEEEETTE--EEEEEEETTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE
T ss_pred eeeEEEEEEEeecCCE--EEEEEEEcCCCcEEEEEEEecc---HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc
Confidence 35799999999998 8 9999999999999999999743 334566788888888885 55 49999999987
Q ss_pred cccccCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHc-CCCccccccCCCCeEEc--CCC
Q 004025 91 ENIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNN-DCKLVHGNVCLSSVVVT--QTL 166 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~-~~~ivH~dLkp~NI~v~--~~g 166 (778)
. ..+||||||+ ++|.+++....... .....+..++.||+.||.|||+ +.+|+||||||+||+++ .++
T Consensus 128 ~--------~~~~lv~e~~~~~L~~~l~~~~~~~-~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~ 198 (382)
T 2vx3_A 128 R--------NHLCLVFEMLSYNLYDLLRNTNFRG-VSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRS 198 (382)
T ss_dssp T--------TEEEEEEECCCCBHHHHHHHTTTSC-CCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSC
T ss_pred C--------CceEEEEecCCCCHHHHHhhcCcCC-CCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCC
Confidence 4 4899999999 68999998764322 2344566779999999999995 47899999999999995 478
Q ss_pred cEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCCh
Q 004025 167 DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT 243 (778)
Q Consensus 167 ~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~ 243 (778)
.+||+|||++....... ....++..|+|||++.+ ..++.++|+|||||++|||++|.+||..
T Consensus 199 ~~kL~DFG~a~~~~~~~---------~~~~~t~~y~aPE~~~~------~~~~~~~DiwSlG~il~elltg~~pf~~ 260 (382)
T 2vx3_A 199 AIKIVDFGSSCQLGQRI---------YQYIQSRFYRSPEVLLG------MPYDLAIDMWSLGCILVEMHTGEPLFSG 260 (382)
T ss_dssp CEEECCCTTCEETTCCC---------CSSCSCGGGCCHHHHTT------CCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cEEEEeccCceeccccc---------ccccCCccccChHHHcC------CCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 89999999998775421 12244568999999887 3577899999999999999999999863
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-33 Score=298.94 Aligned_cols=238 Identities=18% Similarity=0.222 Sum_probs=185.6
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch----hHHHHHHHHHHHHhcC----CCCCeeeEeee
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD----GHLAAARNGVKRLRTV----RHPNILAFLHS 87 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~----~~~~~~~~ev~~Lk~L----rHPnIlk~~d~ 87 (778)
...+|++.+.||.|+ | +||+|+++.+|+.|+||++....... .....+.+|+.+++++ +||||++++++
T Consensus 29 ~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 29 FEAEYRLGPLLGKGGFG--TVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ----CEEEEEEEEETTE--EEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhceEEeeEEEcCCCE--EEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 345799999999998 7 99999999999999999997653321 1223456789999988 89999999999
Q ss_pred eEecccccCCcccEEEEEecC-C--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEc-
Q 004025 88 TEVENIDATSTKITIYIVTEP-V--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT- 163 (778)
Q Consensus 88 ~e~e~~~g~~~~~~lyIVtE~-v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~- 163 (778)
+..+ ..+|+|+|+ + ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++
T Consensus 107 ~~~~--------~~~~~v~e~~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nil~~~ 174 (312)
T 2iwi_A 107 FETQ--------EGFMLVLERPLPAQDLFDYITEKGP---LGEGPSRCFFGQVVAAIQHCHS-RGVVHRDIKDENILIDL 174 (312)
T ss_dssp C-------------CEEEEECCSSEEEHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHH-HTEECCCCSGGGEEEET
T ss_pred EecC--------CeEEEEEEecCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeeecCCChhhEEEeC
Confidence 9764 378999999 4 579999987543 2344566779999999999996 8999999999999999
Q ss_pred CCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCCh
Q 004025 164 QTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT 243 (778)
Q Consensus 164 ~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~ 243 (778)
.+|.+||+|||++........ ....++..|+|||++.+. ...+.++|+|||||++|+|++|..+|..
T Consensus 175 ~~~~~kl~dfg~~~~~~~~~~--------~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slG~il~~l~~g~~pf~~ 241 (312)
T 2iwi_A 175 RRGCAKLIDFGSGALLHDEPY--------TDFDGTRVYSPPEWISRH-----QYHALPATVWSLGILLYDMVCGDIPFER 241 (312)
T ss_dssp TTTEEEECCCSSCEECCSSCB--------CCCCSCTTTSCHHHHHHS-----CBCHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred CCCeEEEEEcchhhhcccCcc--------cccCCcccccCceeeecC-----CCCCccchHHHHHHHHHHHHHCCCCCCC
Confidence 899999999999987754211 122345689999998753 2234589999999999999999998865
Q ss_pred hhh--hc----cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 244 EEL--RN----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 244 ~~l--~~----~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
... .. ...++..+.+++.+||..||.+||++.++++|+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~ 285 (312)
T 2iwi_A 242 DQEILEAELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDP 285 (312)
T ss_dssp HHHHHHTCCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHST
T ss_pred hHHHhhhccCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 321 11 245677889999999999999999999999998
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-32 Score=294.28 Aligned_cols=253 Identities=15% Similarity=0.129 Sum_probs=192.8
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|++.+.||.|+ | +||+|+++.+|+.|+||++... .....+.+.+|+++++.++||||+++++++..+...
T Consensus 27 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~- 101 (317)
T 2buj_A 27 DNKHYLFIQKLGEGGFS--YVDLVEGLHDGHFYALKRILCH--EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGA- 101 (317)
T ss_dssp TTEEEEEEEEEEC--CE--EEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETT-
T ss_pred CCeEEEEEEEecCCCCe--EEEEEEecCCCcEEEEEEEecC--CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCC-
Confidence 345799999999998 7 9999999999999999998753 234566789999999999999999999999754322
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCc-CCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
...+|+||||+ ++|.+++..... ........+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 102 ---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~-~~ivH~dlkp~NIl~~~~~~~kl~d 177 (317)
T 2buj_A 102 ---KHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA-KGYAHRDLKPTNILLGDEGQPVLMD 177 (317)
T ss_dssp ---EEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEECTTSCEEECC
T ss_pred ---CceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEEcCCCCEEEEe
Confidence 45899999999 489998887422 1223345567779999999999996 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCC--cc-ccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----
Q 004025 173 FDVLSEFDGNNEAANGP--ML-QYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE---- 245 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~--~~-~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~---- 245 (778)
||++............. .. .....++..|+|||++.+... ..++.++|+|||||++|+|++|..||....
T Consensus 178 fg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~ 254 (317)
T 2buj_A 178 LGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSH---CVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD 254 (317)
T ss_dssp CSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSE---EEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTS
T ss_pred cCcchhcccccccccccccccccccccCCcccCCHhHhccCCC---cCCCchhhHHHHHHHHHHHHhCCCChhhhhcccc
Confidence 99987654211000000 00 011223558999999865210 124679999999999999999999885321
Q ss_pred -h----------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 246 -L----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 246 -l----------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+ .....+|..+.+++.+||..||.+||++.+++++-
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L 301 (317)
T 2buj_A 255 SVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQL 301 (317)
T ss_dssp CHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred hhhHHhhccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHh
Confidence 0 11135677899999999999999999999998764
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-33 Score=299.04 Aligned_cols=241 Identities=15% Similarity=0.143 Sum_probs=187.4
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|++.+.||.|+ | +||+|+.+ +|+.|+||++....... ....+.+|+++++.++||||+++++++...
T Consensus 28 ~~~~y~~~~~lg~G~~g--~V~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---- 99 (326)
T 3uim_A 28 ASDNFSNKNILGRGGFG--KVYKGRLA-DGTLVAVKRLKEERTQG-GELQFQTEVEMISMAVHRNLLRLRGFCMTP---- 99 (326)
T ss_dssp TTTSSCSTTEEECCSSS--EEEEECCS-SSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCEEECCS----
T ss_pred HhhccccceeEecCCCc--EEEEEEec-CCCEEEEEEeccccCch-HHHHHHHHHHHHHhccCCCccceEEEEecC----
Confidence 345799999999998 8 99999855 69999999997643222 122578999999999999999999999864
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCC-CcchHHHHHHHHHHHHHHHHHHcCC---CccccccCCCCeEEcCCCcEE
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEG-SQRDEYYAWGLNQIAKAVSFLNNDC---KLVHGNVCLSSVVVTQTLDWK 169 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~-~~~~~~i~~gl~QI~~aL~fLH~~~---~ivH~dLkp~NI~v~~~g~~K 169 (778)
...||||||+ ++|.+++....... ......+..++.||+.||.|||+ . +++||||||+||+++.+|.+|
T Consensus 100 ----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~-~~~~~ivH~Dlkp~Nil~~~~~~~k 174 (326)
T 3uim_A 100 ----TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHD-HCDPKIIHRDVKAANILLDEEFEAV 174 (326)
T ss_dssp ----SCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHH-SSSSCEECCCCSGGGEEECTTCCEE
T ss_pred ----CceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeCCCchhhEEECCCCCEE
Confidence 3789999999 48999998754322 12334466679999999999997 6 999999999999999999999
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc-
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN- 248 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~- 248 (778)
|+|||++........ .......++..|+|||++.+. .++.++|+|||||++|+|++|..||.......
T Consensus 175 l~Dfg~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~ 243 (326)
T 3uim_A 175 VGDFGLAKLMDYKDT-----HVTTAVRGTIGHIAPEYLSTG------KSSEKTDVFGYGVMLLELITGQRAFDLARLAND 243 (326)
T ss_dssp ECCCSSCEECCSSSS-----CEECCCCSCGGGCCHHHHHHS------EECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTT
T ss_pred eccCccccccCcccc-----cccccccCCcCccCHHHhccC------CCCccccchhHHHHHHHHHhCCCcccccccccc
Confidence 999999987654221 111122345689999998763 45779999999999999999999986322110
Q ss_pred --------------------c------CCC----CcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 --------------------T------ASI----PKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 --------------------~------~~i----P~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ..+ +..+.+++.+||..||.+||++.+++++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L 306 (326)
T 3uim_A 244 DDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306 (326)
T ss_dssp SCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHH
T ss_pred cchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHh
Confidence 0 011 14577888999999999999999999876
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-32 Score=297.26 Aligned_cols=236 Identities=18% Similarity=0.247 Sum_probs=187.9
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCC-CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCC------eeeEeee
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDG-SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPN------ILAFLHS 87 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g-~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPn------Ilk~~d~ 87 (778)
....+|++.+.||.|+ | +||+|+++.++ ..|+||++... ....+.+.+|+++++.|+|++ |+.++++
T Consensus 16 ~~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~ 90 (355)
T 2eu9_A 16 WLQERYEIVGNLGEGTFG--KVVECLDHARGKSQVALKIIRNV---GKYREAARLEINVLKKIKEKDKENKFLCVLMSDW 90 (355)
T ss_dssp EETTTEEEEEEEEEETTE--EEEEEEETTTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEE
T ss_pred eecccEEEEEEeeccCCe--EEEEEEecCCCceEEEEEEEccc---ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeee
Confidence 3456899999999998 8 99999998777 68999999742 234567888999999998766 8999999
Q ss_pred eEecccccCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEE----
Q 004025 88 TEVENIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV---- 162 (778)
Q Consensus 88 ~e~e~~~g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v---- 162 (778)
++.. ..+||||||+ ++|.+++....... .....+..++.||+.||.|||+ .+++||||||+||++
T Consensus 91 ~~~~--------~~~~lv~e~~~~~l~~~l~~~~~~~-~~~~~~~~i~~qi~~~L~~lH~-~~ivH~Dlkp~NIll~~~~ 160 (355)
T 2eu9_A 91 FNFH--------GHMCIAFELLGKNTFEFLKENNFQP-YPLPHVRHMAYQLCHALRFLHE-NQLTHTDLKPENILFVNSE 160 (355)
T ss_dssp EEET--------TEEEEEEECCCCBHHHHHHHTTTCC-CCHHHHHHHHHHHHHHHHHHHT-TTEECCCCCGGGEEESCCC
T ss_pred eeeC--------CeEEEEEeccCCChHHHHHhccCCC-CCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEEeccc
Confidence 8864 3899999999 56888877654222 2344566779999999999995 899999999999999
Q ss_pred ---------------cCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHH
Q 004025 163 ---------------TQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGL 227 (778)
Q Consensus 163 ---------------~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSL 227 (778)
+.++.+||+|||++....... ....++..|+|||++.+ ..++.++|+|||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~---------~~~~gt~~y~aPE~~~~------~~~~~~~Di~sl 225 (355)
T 2eu9_A 161 FETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHH---------TTIVATRHYRPPEVILE------LGWAQPCDVWSI 225 (355)
T ss_dssp EEEEECCC-CCCEEEESCCCEEECCCTTCEETTSCC---------CSSCSCGGGCCHHHHTT------CCCCTHHHHHHH
T ss_pred ccccccccccccccccCCCcEEEeecCccccccccc---------cCCcCCCcccCCeeeec------CCCCCccchHHH
Confidence 568899999999998654321 11234568999999876 357789999999
Q ss_pred HHHHHHHHhCCCCCChhhhh--------ccCCCC----------------------------------------------
Q 004025 228 GCLIYELFSGMRLSKTEELR--------NTASIP---------------------------------------------- 253 (778)
Q Consensus 228 G~liyel~tg~~p~~~~~l~--------~~~~iP---------------------------------------------- 253 (778)
||++|||++|..||...... ....+|
T Consensus 226 G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (355)
T 2eu9_A 226 GCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSL 305 (355)
T ss_dssp HHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSH
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccch
Confidence 99999999999998642211 011222
Q ss_pred --cchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 254 --KSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 254 --~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
..+.+++++||..||.+||++.++++|+
T Consensus 306 ~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp 335 (355)
T 2eu9_A 306 EHVQLFDLMRRMLEFDPAQRITLAEALLHP 335 (355)
T ss_dssp HHHHHHHHHHHHTCSSTTTSCCHHHHTTSG
T ss_pred hHHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence 2466889999999999999999999998
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-32 Score=299.93 Aligned_cols=249 Identities=10% Similarity=0.018 Sum_probs=188.6
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECC---CCCcEEEEEEeCCCCch----h-----HHHHHHHHHHHHhcCCCCCeee
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKD---DGSPVSIFSISGTNAQD----G-----HLAAARNGVKRLRTVRHPNILA 83 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~---~g~~VaIK~~~~~~~~~----~-----~~~~~~~ev~~Lk~LrHPnIlk 83 (778)
...+|++++.||.|+ | +||+|+++. ++..|+||++....... . ....+.+|+..++.++||||++
T Consensus 35 ~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~ 112 (345)
T 2v62_A 35 EGNQWVLGKKIGSGGFG--LIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPL 112 (345)
T ss_dssp TSCEEEEEEEC--------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCC
T ss_pred cCceEEEEeeEeecCCe--EEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcce
Confidence 446799999999998 8 899999987 78999999998653221 0 1123557888999999999999
Q ss_pred EeeeeEecccccCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEE
Q 004025 84 FLHSTEVENIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV 162 (778)
Q Consensus 84 ~~d~~e~e~~~g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v 162 (778)
+++++..+..+ ...+||||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||++
T Consensus 113 ~~~~~~~~~~~----~~~~~lv~e~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~aL~~LH~-~~ivH~Dlkp~NIll 184 (345)
T 2v62_A 113 FYGSGLTEFKG----RSYRFMVMERLGIDLQKISGQNGT---FKKSTVLQLGIRMLDVLEYIHE-NEYVHGDIKAANLLL 184 (345)
T ss_dssp EEEEEEEESSS----CEEEEEEEECEEEEHHHHCBGGGB---CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEE
T ss_pred eecccccccCC----CcEEEEEEeccCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeeCCCcCHHHEEE
Confidence 99999874322 35899999999 579998876542 2344566779999999999996 899999999999999
Q ss_pred cCCC--cEEEEecccccccCCCCCCCCC-CccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCC
Q 004025 163 TQTL--DWKLHAFDVLSEFDGNNEAANG-PMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMR 239 (778)
Q Consensus 163 ~~~g--~~KL~dFgla~~~~~~~~~~~~-~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~ 239 (778)
+.++ .+||+|||+++.+......... ........++..|+|||++.+ ..++.++|+|||||++|||++|..
T Consensus 185 ~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~il~ell~g~~ 258 (345)
T 2v62_A 185 GYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKG------VALSRRSDVEILGYCMLRWLCGKL 258 (345)
T ss_dssp ESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHT------CCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred ccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcC------CCCCchhhHHHHHHHHHHHHhCCC
Confidence 9887 9999999999877543211110 001122345569999999886 357789999999999999999999
Q ss_pred CCChhh-----h--------hcc----------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 240 LSKTEE-----L--------RNT----------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 240 p~~~~~-----l--------~~~----------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
||.... . ..+ ..+|..+.+++.+||..||.+||++.++++.-
T Consensus 259 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L 323 (345)
T 2v62_A 259 PWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKIL 323 (345)
T ss_dssp TTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHH
T ss_pred CccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHH
Confidence 984310 0 000 16788999999999999999999999998754
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-33 Score=295.82 Aligned_cols=242 Identities=17% Similarity=0.174 Sum_probs=186.6
Q ss_pred CCCceeccCCCCCC-CceEEEEeE----ECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGT----SKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~----~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~ 92 (778)
...|++.+.||.|+ | +||.|+ +..+++.|+||++..... ....+.+.+|+++|+.++||||+++++++..+.
T Consensus 20 ~~~~~~~~~lg~G~~g--~V~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 96 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFG--KVELCRYDPEGDNTGEQVAVKSLKPESG-GNHIADLKKEIEILRNLYHENIVKYKGICTEDG 96 (302)
T ss_dssp GGGEEEEEEEEECSSE--EEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC--
T ss_pred hhhhhhhhccCCCCce--EEEEEEEccccCccCeEEEEEEeccccc-chhHHHHHHHHHHHHhCCCCCeeeeeeEEecCC
Confidence 34599999999998 8 899999 567899999999986432 234567899999999999999999999998754
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEE
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
...+|+||||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||
T Consensus 97 ------~~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dikp~Nil~~~~~~~kl 167 (302)
T 4e5w_A 97 ------GNGIKLIMEFLPSGSLKEYLPKNKNK--INLKQQLKYAVQICKGMDYLGS-RQYVHRDLAARNVLVESEHQVKI 167 (302)
T ss_dssp -------CCEEEEEECCTTCBHHHHHHHHTTT--CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEEEETTEEEE
T ss_pred ------CceEEEEEEeCCCCcHHHHHHhcccc--CCHHHHHHHHHHHHHHHHHhhc-CCcccCCCchheEEEcCCCCEEE
Confidence 24799999999 4899999665421 2344456679999999999996 89999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-----
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----- 245 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----- 245 (778)
+|||++.......... .......++..|+|||++.+. .++.++|+|||||++|+|++|..++....
T Consensus 168 ~Dfg~~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~ 238 (302)
T 4e5w_A 168 GDFGLTKAIETDKEYY---TVKDDRDSPVFWYAPECLMQS------KFYIASDVWSFGVTLHELLTYCDSDSSPMALFLK 238 (302)
T ss_dssp CCCTTCEECCTTCCEE---ECCCCTTCCGGGCCHHHHHHC------EEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHH
T ss_pred CcccccccccCCCcce---eccCCCCCCccccCCeeecCC------CCCcchhHHHHHHHHHHHHHccCCCcchhhHHhh
Confidence 9999998776532110 001112233469999998763 45578999999999999999987642110
Q ss_pred -----------------hh------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 246 -----------------LR------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 246 -----------------l~------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
+. ....+|..+.+++.+||..||.+||++.++++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 296 (302)
T 4e5w_A 239 MIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEG 296 (302)
T ss_dssp HHCSCCGGGHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred ccCCcccccCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHH
Confidence 00 113567789999999999999999999999864
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-33 Score=289.10 Aligned_cols=236 Identities=14% Similarity=0.130 Sum_probs=188.2
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
..+|++.+.||.|+ | +||.|+++ +++.|+||++...... .+.+.+|+++++.++||||+++++++..+
T Consensus 7 ~~~y~~~~~lg~G~~g--~V~~~~~~-~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 75 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFG--LVHLGYWL-NKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCLEQ----- 75 (267)
T ss_dssp GGGEEEEEEEEEETTE--EEEEEEET-TTEEEEEEEECTTTBC---HHHHHHHHHHHHTCCCTTBCCEEEEECSS-----
T ss_pred hhheeeeeEecCCCce--eEEEEEec-CCCeEEEEEccccCCC---HHHHHHHHHHHHhCCCCCEeeEEEEEccC-----
Confidence 45799999999998 7 99999987 6788999999865433 35688999999999999999999999764
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 76 ---~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~Nili~~~~~~kl~dfg 149 (267)
T 3t9t_A 76 ---APICLVTEFMEHGCLSDYLRTQRG--LFAAETLLGMCLDVCEGMAYLEE-ACVIHRDLAARNCLVGENQVIKVSDFG 149 (267)
T ss_dssp ---SSCEEEECCCTTCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHH-TTCCCSSCCGGGEEECGGGCEEECCTT
T ss_pred ---CCeEEEEeCCCCCcHHHHHhhCcc--cCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCchheEEECCCCCEEEcccc
Confidence 3789999999 479999987532 12344566679999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR------ 247 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~------ 247 (778)
++.......... .....++..|+|||++.+ ..++.++|+|||||++|+|++ |..||......
T Consensus 150 ~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i 218 (267)
T 3t9t_A 150 MTRFVLDDQYTS-----STGTKFPVKWASPEVFSF------SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 218 (267)
T ss_dssp GGGGBCCHHHHS-----TTSTTCCGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH
T ss_pred cccccccccccc-----cccccccccccChhhhcC------CCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHH
Confidence 998764321100 111123347999999875 356789999999999999999 78887542111
Q ss_pred -c------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -N------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -~------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ...+|..+.+++.+||..+|.+||++.+++++-
T Consensus 219 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L 259 (267)
T 3t9t_A 219 STGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQL 259 (267)
T ss_dssp HTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred hcCCcCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 1 123567789999999999999999999998763
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-32 Score=298.92 Aligned_cols=235 Identities=18% Similarity=0.220 Sum_probs=168.0
Q ss_pred CCceecc-CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 19 LPYNIGD-PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 19 ~~Y~i~~-~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
.+|.+.+ .||.|+ | +||+|+++.+|+.|+||++... .. ..+.....++.++||||++++++++....+
T Consensus 28 ~~y~i~~~~lG~G~~g--~V~~~~~~~~~~~vavK~~~~~---~~---~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~-- 97 (336)
T 3fhr_A 28 DDYQLSKQVLGLGVNG--KVLECFHRRTGQKCALKLLYDS---PK---ARQEVDHHWQASGGPHIVCILDVYENMHHG-- 97 (336)
T ss_dssp GTEEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEESS---HH---HHHHHHHHHHHTTSTTBCCEEEEEEEEETT--
T ss_pred ceeEecceeeeeCCCe--EEEEEEECCCCCEEEEEEecCc---HH---HHHHHHHHHHhcCCCChHHHHHHHhhccCC--
Confidence 4788855 589998 8 9999999999999999999753 11 122233446778999999999999863322
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC---CcEEEE
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT---LDWKLH 171 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~---g~~KL~ 171 (778)
...+||||||| ++|.+++...... ......+..++.||+.||.|||+ .+++||||||+||+++.+ +.+||+
T Consensus 98 --~~~~~lv~e~~~gg~L~~~l~~~~~~-~l~~~~~~~i~~ql~~~l~~LH~-~~ivH~dlkp~NIll~~~~~~~~~kl~ 173 (336)
T 3fhr_A 98 --KRCLLIIMECMEGGELFSRIQERGDQ-AFTEREAAEIMRDIGTAIQFLHS-HNIAHRDVKPENLLYTSKEKDAVLKLT 173 (336)
T ss_dssp --EEEEEEEEECCTTEEHHHHHHTC-CC-CCBHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEESCSSTTCCEEEC
T ss_pred --CceEEEEEeccCCCCHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEEecCCCceEEEe
Confidence 34799999999 4799999865422 23344566779999999999996 899999999999999864 559999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc---
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN--- 248 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~--- 248 (778)
|||++....... .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||.......
T Consensus 174 Dfg~~~~~~~~~--------~~~~~~t~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 239 (336)
T 3fhr_A 174 DFGFAKETTQNA--------LQTPCYTPYYVAPEVLGP------EKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP 239 (336)
T ss_dssp CCTTCEEC------------------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------
T ss_pred ccccceeccccc--------cccCCCCcCccChhhhCC------CCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh
Confidence 999998665321 111234568999999865 245678999999999999999999885432111
Q ss_pred -----------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -----------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -----------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+|..+.+++.+||..||.+||++.++++|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 289 (336)
T 3fhr_A 240 GMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHP 289 (336)
T ss_dssp -----------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred hHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 135677899999999999999999999999998
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-33 Score=290.47 Aligned_cols=234 Identities=16% Similarity=0.221 Sum_probs=178.3
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch--hHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD--GHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~--~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
...+|++.+.||.|+ | +||+|++. |+.|+||++....... ...+.+++|+++++.++||||+++++++..+
T Consensus 5 ~~~~~~~~~~lg~G~~g--~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-- 78 (271)
T 3dtc_A 5 DFAELTLEEIIGIGGFG--KVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKE-- 78 (271)
T ss_dssp CTTSEEEEEEEEEETTE--EEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--
T ss_pred chhheeeeeeeccCCCe--EEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC--
Confidence 345799999999998 8 99999985 8899999987643222 3456789999999999999999999999864
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCC---ccccccCCCCeEEcC----
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCK---LVHGNVCLSSVVVTQ---- 164 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~---ivH~dLkp~NI~v~~---- 164 (778)
..+|+||||+ ++|.+++.... .....+..++.||+.||.|||+ .+ ++||||||+||+++.
T Consensus 79 ------~~~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~i~~~l~~~l~~lH~-~~~~~i~H~dikp~Nil~~~~~~~ 147 (271)
T 3dtc_A 79 ------PNLCLVMEFARGGPLNRVLSGKR----IPPDILVNWAVQIARGMNYLHD-EAIVPIIHRDLKSSNILILQKVEN 147 (271)
T ss_dssp --------CEEEEECCTTEEHHHHHTSSC----CCHHHHHHHHHHHHHHHHHHHH-SSSSCCCCSCCSGGGEEESSCCSS
T ss_pred ------CceEEEEEcCCCCCHHHHhhcCC----CCHHHHHHHHHHHHHHHHHHHh-CCCCceeecCCchHHEEEeccccc
Confidence 3789999999 46888885433 2344566679999999999996 77 899999999999986
Q ss_pred ----CCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCC
Q 004025 165 ----TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL 240 (778)
Q Consensus 165 ----~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p 240 (778)
++.+||+|||++........ ....++..|+|||++.+ ..++.++|+|||||++|+|++|..|
T Consensus 148 ~~~~~~~~kl~Dfg~~~~~~~~~~--------~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~~l~~g~~p 213 (271)
T 3dtc_A 148 GDLSNKILKITDFGLAREWHRTTK--------MSAAGAYAWMAPEVIRA------SMFSKGSDVWSYGVLLWELLTGEVP 213 (271)
T ss_dssp SCCSSCCEEECCCCC---------------------CCGGGSCHHHHHH------CCCSHHHHHHHHHHHHHHHHHCCCT
T ss_pred ccccCcceEEccCCcccccccccc--------cCCCCccceeCHHHhcc------CCCCchhhHHHHHHHHHHHHhCCCC
Confidence 77899999999986654211 12234558999999876 3567899999999999999999998
Q ss_pred CChhhhh--------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 241 SKTEELR--------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 241 ~~~~~l~--------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
|...... ....+|..+.+++.+||..+|.+||++.+++++-
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L 268 (271)
T 3dtc_A 214 FRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQL 268 (271)
T ss_dssp TTTSCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCCHHHHHHhhhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHH
Confidence 8642110 1135677899999999999999999999998763
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-32 Score=297.92 Aligned_cols=244 Identities=14% Similarity=0.158 Sum_probs=186.2
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeE-----ECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeE
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGT-----SKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTE 89 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~-----~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e 89 (778)
+...+|++.+.||.|+ | +||+|+ +..++..|+||++.... .......+.+|+.++++++||||+++++++.
T Consensus 27 ~~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 103 (327)
T 2yfx_A 27 VPRKNITLIRGLGHGAFG--EVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQNIVRCIGVSL 103 (327)
T ss_dssp CCGGGCEEEEECC--CSS--CEEEEEC--------CCEEEEEECCSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred CChhheEEEEEEcCCCCe--eEEEEEEcCCCCCCccceEEEEEecccc-chhhHHHHHHHHHHHhhCCCCCCCeEEEEEc
Confidence 4556899999999998 8 899999 55678899999997542 3344567889999999999999999999998
Q ss_pred ecccccCCcccEEEEEecCC--cChHHHHHHhCcC----CCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEc
Q 004025 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLE----GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT 163 (778)
Q Consensus 90 ~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~----~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~ 163 (778)
.. ..+||||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++||||||+||+++
T Consensus 104 ~~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~-~~i~H~dlkp~NIli~ 174 (327)
T 2yfx_A 104 QS--------LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE-NHFIHRDIAARNCLLT 174 (327)
T ss_dssp SS--------SSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEES
T ss_pred CC--------CCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhh-CCeecCcCCHhHEEEe
Confidence 64 3689999999 4799999876421 112334466679999999999996 8999999999999999
Q ss_pred CCC---cEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCC
Q 004025 164 QTL---DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMR 239 (778)
Q Consensus 164 ~~g---~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~ 239 (778)
.+| .+||+|||++........... .....++..|+|||++.+ ..++.++|+|||||++|+|++ |..
T Consensus 175 ~~~~~~~~kl~Dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~ellt~g~~ 244 (327)
T 2yfx_A 175 CPGPGRVAKIGDFGMARDIYRASYYRK----GGCAMLPVKWMPPEAFME------GIFTSKTDTWSFGVLLWEIFSLGYM 244 (327)
T ss_dssp CSSTTCCEEECCCHHHHHHHC----------CCGGGSCGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred cCCCcceEEECcccccccccccccccc----CCCcCCCcceeCHhHhcC------CCCCchhhHHHHHHHHHHHHcCCCC
Confidence 544 599999999986543211100 111233458999999876 356789999999999999998 878
Q ss_pred CCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 240 LSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 240 p~~~~~l~-------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
||...... ....+|..+.+++.+||..||.+||++.+++++.
T Consensus 245 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l 299 (327)
T 2yfx_A 245 PYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 299 (327)
T ss_dssp SSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCcCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHH
Confidence 87532211 1135677899999999999999999999999886
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1e-32 Score=298.71 Aligned_cols=243 Identities=13% Similarity=0.136 Sum_probs=192.6
Q ss_pred CCCCceeccCCCCCC-CceEEEEeE----ECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEec
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGT----SKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~----~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e 91 (778)
....|++.+.||.|+ | +||+|+ ++.+++.|+||++... .....+.+.+|+++|+.|+||||+++++++..+
T Consensus 21 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 96 (327)
T 3lxl_A 21 EERHLKYISQLGKGNFG--SVELCRYDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALHSDFIVKYRGVSYGP 96 (327)
T ss_dssp CGGGEEEEEEEEEETTE--EEEEEEECTTSSSCSEEEEEEEESSC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS
T ss_pred chhhhhhhhhccCCCCe--EEEEEEeccCCCCcceEEEEEEeccC--CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecC
Confidence 456899999999998 8 999999 5678899999999764 234456789999999999999999999998754
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEE
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~K 169 (778)
. ...+||||||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+|
T Consensus 97 ~------~~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~i~~qi~~al~~lH~-~~ivH~Dikp~NIl~~~~~~~k 167 (327)
T 3lxl_A 97 G------RQSLRLVMEYLPSGCLRDFLQRHRAR--LDASRLLLYSSQICKGMEYLGS-RRCVHRDLAARNILVESEAHVK 167 (327)
T ss_dssp S------SCEEEEEEECCTTCBHHHHHHHHGGG--CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEEEETTEEE
T ss_pred C------CceEEEEEeecCCCCHHHHHHhcccC--CCHHHHHHHHHHHHHHHHHHHh-CCccCCCCChhhEEECCCCCEE
Confidence 3 34899999999 4799999874321 2344466679999999999996 8999999999999999999999
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh--
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-- 247 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~-- 247 (778)
|+|||++......... ........++..|+|||++.+. .++.++|+|||||++|+|++|..||......
T Consensus 168 l~Dfg~~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~ 238 (327)
T 3lxl_A 168 IADFGLAKLLPLDKDY---YVVREPGQSPIFWYAPESLSDN------IFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFL 238 (327)
T ss_dssp ECCGGGCEECCTTCSE---EECSSCCCSCGGGSCHHHHHHC------EEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHH
T ss_pred EcccccceecccCCcc---ceeeccCCccccccCHHHhccC------CCChHHhHHHHHHHHHHHHhCCCCCccccchhh
Confidence 9999999877543211 0011112234469999998763 4567999999999999999998876432110
Q ss_pred --------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 --------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 --------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|..+.+++.+||..||.+||++.+++++-
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L 298 (327)
T 3lxl_A 239 RMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQL 298 (327)
T ss_dssp HHCC----CCHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred hhcccccccccHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 1135677899999999999999999999998764
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=99.98 E-value=8.3e-33 Score=317.56 Aligned_cols=236 Identities=16% Similarity=0.243 Sum_probs=190.4
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..|++.+.||.|+ | +||+|+++.++..|+||++..... ..+.+.+|+++|++|+||||+++++++..+
T Consensus 220 ~~~~~~~~lG~G~fg--~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------ 288 (495)
T 1opk_A 220 TDITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTRE------ 288 (495)
T ss_dssp GGEEEEEESGGGTTS--SEEEEEEGGGTEEEEEEECCSSSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECSS------
T ss_pred HHceeeeEecCCCCe--EEEEEEEcCCCeEEEEEEecCccc---chHHHHHHHHHHHhcCCCCEeeEEEEEecC------
Confidence 4688999999998 8 899999998899999999975432 245788999999999999999999999764
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+||||||+ ++|.++|+...... .....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|||+
T Consensus 289 --~~~~lv~E~~~~g~L~~~l~~~~~~~-~~~~~~~~i~~qi~~~L~~LH~-~~ivHrDlkp~NIll~~~~~~kl~DFG~ 364 (495)
T 1opk_A 289 --PPFYIITEFMTYGNLLDYLRECNRQE-VSAVVLLYMATQISSAMEYLEK-KNFIHRNLAARNCLVGENHLVKVADFGL 364 (495)
T ss_dssp --SSCEEEEECCTTCBHHHHHHHSCTTT-SCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECGGGCEEECCTTC
T ss_pred --CcEEEEEEccCCCCHHHHHHhcCcCC-CCHHHHHHHHHHHHHHHHHHHh-CCcccCCCChhhEEECCCCcEEEeeccc
Confidence 3789999999 58999998754322 2334456679999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh-------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR------- 247 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~------- 247 (778)
++........ .......+..|+|||++.+. .++.++|+|||||++|||++ |..||......
T Consensus 365 a~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~------~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~ 433 (495)
T 1opk_A 365 SRLMTGDTYT-----AHAGAKFPIKWTAPESLAYN------KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 433 (495)
T ss_dssp EECCTTCCEE-----CCTTCCCCGGGCCHHHHHHC------EECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH
T ss_pred ceeccCCcee-----ecCCCcCCcceeCHhHHhcC------CCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 9876542110 01111233479999998763 46779999999999999998 88887542211
Q ss_pred ------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 ------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 ------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+|..+.+++.+||..||.+||++.++++.
T Consensus 434 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~ 472 (495)
T 1opk_A 434 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQA 472 (495)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 123567789999999999999999999999875
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1e-32 Score=297.97 Aligned_cols=241 Identities=15% Similarity=0.164 Sum_probs=188.4
Q ss_pred CCCCc-eeccCCCCCC-CceEEEEeE----ECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEe
Q 004025 17 KDLPY-NIGDPYPSAW-GSWSHFQGT----SKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (778)
Q Consensus 17 ~~~~Y-~i~~~lg~g~-g~w~Vy~g~----~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~ 90 (778)
...+| ++.+.||.|+ | +||.+. ++.+|+.|+||++.... .....+.+.+|+++|+.|+||||+++++++..
T Consensus 28 ~~~r~~~~~~~lG~G~~g--~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 104 (318)
T 3lxp_A 28 FHKRYLKKIRDLGEGHFG--KVSLYCYDPTNDGTGEMVAVKALKADA-GPQHRSGWKQEIDILRTLYHEHIIKYKGCCED 104 (318)
T ss_dssp CCGGGEEEEEEEEECSSE--EEEEEEECSCC--CCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred ecHHHHhhhheecCCCCe--EEEEEEEccCCCCCCcEEEEEEecccc-ChHHHHHHHHHHHHHHhCCCcchhhEEEEEec
Confidence 44456 9999999998 7 886654 55678999999998653 33456778999999999999999999999987
Q ss_pred cccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcE
Q 004025 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDW 168 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~ 168 (778)
.. ...+||||||+ ++|.+++..... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+
T Consensus 105 ~~------~~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~i~~~l~~~l~~LH~-~~ivH~Dikp~Nil~~~~~~~ 173 (318)
T 3lxp_A 105 AG------AASLQLVMEYVPLGSLRDYLPRHSI----GLAQLLLFAQQICEGMAYLHA-QHYIHRDLAARNVLLDNDRLV 173 (318)
T ss_dssp TT------TTEEEEEECCCTTCBHHHHGGGSCC----CHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECTTCCE
T ss_pred CC------CceEEEEEecccCCcHHHHHhhCCC----CHHHHHHHHHHHHHHHHHHHh-CCccCCCCchheEEEcCCCCE
Confidence 54 34899999999 489999876542 234466679999999999996 899999999999999999999
Q ss_pred EEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh-
Q 004025 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR- 247 (778)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~- 247 (778)
||+|||++.......... .......++..|+|||++.+. .++.++|+|||||++|+|++|..||......
T Consensus 174 kl~Dfg~a~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~ 244 (318)
T 3lxp_A 174 KIGDFGLAKAVPEGHEYY---RVREDGDSPVFWYAPECLKEY------KFYYASDVWSFGVTLYELLTHCDSSQSPPTKF 244 (318)
T ss_dssp EECCGGGCEECCTTCSEE---EC---CCCCGGGCCHHHHHHC------EEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH
T ss_pred EECCcccccccccccccc---ccccCCCCCceeeChHHhcCC------CCCcHHHHHHHHHHHHHHHhCCCcccccchhh
Confidence 999999998875432100 001112234469999998763 4557899999999999999998887532100
Q ss_pred ---------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 ---------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 ---------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+|..+.+++++||..||.+||++.++++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 304 (318)
T 3lxp_A 245 LELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPI 304 (318)
T ss_dssp HHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hhhhcccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 113567789999999999999999999999864
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.5e-32 Score=293.96 Aligned_cols=238 Identities=11% Similarity=0.144 Sum_probs=185.8
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC--chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA--QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~--~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
-|..++.||.|+ | +||+|+. +++.|+||++..... .+...+.+.+|+++++.++||||+++++++...
T Consensus 32 ~~~~~~~lg~G~~g--~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----- 102 (307)
T 2nru_A 32 ISVGGNKMGEGGFG--VVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDG----- 102 (307)
T ss_dssp TTTTCCEEEECSSE--EEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSS-----
T ss_pred ccccCCccccCCCe--EEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecC-----
Confidence 366678999998 8 9999986 589999999976432 234567789999999999999999999999763
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+|+||||+ ++|.+++.............+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 103 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~-~~i~H~dlkp~Nili~~~~~~kl~Dfg 178 (307)
T 2nru_A 103 ---DDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE-NHHIHRDIKSANILLDEAFTAKISDFG 178 (307)
T ss_dssp ---SSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHH-TTEECSCCCGGGEEECTTCCEEECCCT
T ss_pred ---CceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhc-CCeecCCCCHHHEEEcCCCcEEEeecc
Confidence 3789999999 5799998765433333445566779999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------ 248 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~------ 248 (778)
++........ ........++..|+|||++.+. ++.++|+|||||++|+|++|.+||.......
T Consensus 179 ~~~~~~~~~~----~~~~~~~~g~~~y~aPE~~~~~-------~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 247 (307)
T 2nru_A 179 LARASEKFAQ----TVMTSRIVGTTAYMAPEALRGE-------ITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 247 (307)
T ss_dssp TCEECCSCSS----CEECSSCCSCGGGCCHHHHTTE-------ECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHH
T ss_pred cccccccccc----cccccccCCCcCcCChHHhcCC-------CCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHH
Confidence 9887654221 1111122345689999998753 4578999999999999999998875421100
Q ss_pred -----------------cCC----CCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -----------------TAS----IPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -----------------~~~----iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
... .+..+.+++.+||..+|.+||++.+++++-
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L 301 (307)
T 2nru_A 248 EEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301 (307)
T ss_dssp HHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHH
T ss_pred HHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 001 123467889999999999999999998753
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=3.6e-33 Score=311.31 Aligned_cols=248 Identities=14% Similarity=0.186 Sum_probs=190.3
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
....|.+.+.||.|+ | +||+|+++.+|+.|+||++...... ...+.+.+|+++|+.++||||++++++++...
T Consensus 7 ~~~~y~i~~~LG~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--- 80 (396)
T 4eut_A 7 SNHLWLLSDILGQGATA--NVFRGRHKKTGDLFAIKVFNNISFL-RPVDVQMREFEVLKKLNHKNIVKLFAIEEETT--- 80 (396)
T ss_dssp SSEEEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEECGGGGG-SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTT---
T ss_pred CCCceEEEEEEEcCCCe--EEEEEEECCCCcEEEEEEecccccc-chHHHHHHHHHHHHhcCCCCCCeEEEeeccCC---
Confidence 456799999999998 8 9999999999999999999753222 23566789999999999999999999998654
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEE----cCCCcEE
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV----TQTLDWK 169 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v----~~~g~~K 169 (778)
...+||||||| ++|.++++............+..++.||+.||.|||+ .+++||||||+||++ +.++.+|
T Consensus 81 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivH~Dlkp~NIll~~~~~~~~~~k 156 (396)
T 4eut_A 81 ---TRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE-NGIVHRNIKPGNIMRVIGEDGQSVYK 156 (396)
T ss_dssp ---TCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEEEECTTSCEEEE
T ss_pred ---CCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHH-CCEEECCcCHHHEEEeecCCCceeEE
Confidence 34789999999 4799998765433223455567779999999999996 899999999999999 7788899
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccc--cCCCCCcchhHHHHHHHHHHHhCCCCCChhh--
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAV--RKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-- 245 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~--~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-- 245 (778)
|+|||++........ .....++..|+|||++.+..... ...++.++|+|||||++|||++|..||....
T Consensus 157 L~DFG~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~ 229 (396)
T 4eut_A 157 LTDFGAARELEDDEQ-------FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP 229 (396)
T ss_dssp ECCGGGCEECCCGGG-------SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCT
T ss_pred EecCCCceEccCCCc-------cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcc
Confidence 999999987754321 11224566999999976410000 0134568999999999999999998874211
Q ss_pred ------hhc-c--------------------------------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 246 ------LRN-T--------------------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 246 ------l~~-~--------------------------------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+.. . ..++..+.+++++||..||.+|+++.++++..
T Consensus 230 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l 304 (396)
T 4eut_A 230 RRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET 304 (396)
T ss_dssp TTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred cchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHH
Confidence 000 0 01123466788999999999999999987653
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.8e-32 Score=294.75 Aligned_cols=231 Identities=14% Similarity=0.132 Sum_probs=180.8
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
..+|++.+.||.|+ | +||+|+++ ++.|+||.+... ...+.+.+|+++|++++||||+++++++.+
T Consensus 7 ~~~~~~~~~lg~G~~g--~V~~~~~~--~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~------ 72 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFG--VVCKAKWR--AKDVAIKQIESE----SERKAFIVELRQLSRVNHPNIVKLYGACLN------ 72 (307)
T ss_dssp GGGEEEEEEEECCSSS--EEEEEEET--TEEEEEEECSST----THHHHHHHHHHHHHHCCCTTBCCEEEBCTT------
T ss_pred HhHeeeeeEeecCCCc--eEEEEEEC--CeeEEEEEecCh----hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC------
Confidence 34699999999998 8 99999985 788999998643 235678899999999999999999998863
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcC--CCccccccCCCCeEEcCCCc-EEEE
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNND--CKLVHGNVCLSSVVVTQTLD-WKLH 171 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~--~~ivH~dLkp~NI~v~~~g~-~KL~ 171 (778)
.+||||||+ ++|.+++.............+..++.||+.||.|||+. .+++||||||+||+++.+|. +||+
T Consensus 73 ----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~ 148 (307)
T 2eva_A 73 ----PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKIC 148 (307)
T ss_dssp ----TTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEEC
T ss_pred ----CcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEc
Confidence 479999999 48999998654322223344556689999999999952 68999999999999998887 7999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-----h
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-----L 246 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-----l 246 (778)
|||++....... ....++..|+|||++.+ ..++.++|+|||||++|||++|..||.... .
T Consensus 149 Dfg~~~~~~~~~---------~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~ 213 (307)
T 2eva_A 149 DFGTACDIQTHM---------TNNKGSAAWMAPEVFEG------SNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRI 213 (307)
T ss_dssp CCCC---------------------CCTTSSCHHHHTC------CCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHH
T ss_pred cccccccccccc---------ccCCCCCceEChhhhCC------CCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHH
Confidence 999987654321 11234568999999876 357789999999999999999999885321 0
Q ss_pred ----------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 ----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ----------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....+|..+.+++.+||+.+|.+||++.++++.-
T Consensus 214 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L 258 (307)
T 2eva_A 214 MWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIM 258 (307)
T ss_dssp HHHHHTTCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHhcCCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHH
Confidence 01246788899999999999999999999998753
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.3e-32 Score=293.90 Aligned_cols=245 Identities=18% Similarity=0.211 Sum_probs=188.0
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC--CCCeeeEeeeeEeccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR--HPNILAFLHSTEVENI 93 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr--HPnIlk~~d~~e~e~~ 93 (778)
....|++.+.||.|+ | +||+|+++ +++.|+||++..........+.+++|+++++.|+ ||||+++++++..+
T Consensus 26 ~~~~y~~~~~lg~G~~g--~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~-- 100 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSS--KVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD-- 100 (313)
T ss_dssp TTEEEEEEEEEECCSSE--EEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECS--
T ss_pred ccceEEEEEEecCCCCE--EEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecC--
Confidence 445799999999998 7 99999986 5899999999876555566778999999999998 59999999999864
Q ss_pred ccCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 94 DATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+|||||+. ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++ +|.+||+|
T Consensus 101 ------~~~~lv~e~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~aL~~LH~-~~ivH~dlkp~NIl~~-~~~~kL~D 169 (313)
T 3cek_A 101 ------QYIYMVMECGNIDLNSWLKKKKS---IDPWERKSYWKNMLEAVHTIHQ-HGIVHSDLKPANFLIV-DGMLKLID 169 (313)
T ss_dssp ------SEEEEEECCCSEEHHHHHHHCSS---CCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEEE-TTEEEECC
T ss_pred ------CEEEEEEecCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCceecCCCcccEEEE-CCeEEEee
Confidence 4899999977 579999987542 2233456669999999999996 8999999999999996 48999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCcccccccccc-----ccCCCCCcchhHHHHHHHHHHHhCCCCCChh--h
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTA-----VRKSPPWSIDSWGLGCLIYELFSGMRLSKTE--E 245 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~-----~~~~~~~~~DiwSLG~liyel~tg~~p~~~~--~ 245 (778)
||++......... .......++..|+|||++.+.... ....++.++|+|||||++|+|++|..||... .
T Consensus 170 fg~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 245 (313)
T 3cek_A 170 FGIANQMQPDTTS----VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 245 (313)
T ss_dssp CSSSCC------------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH
T ss_pred ccccccccCcccc----ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH
Confidence 9999876543211 111122345689999998651100 0125677999999999999999999888532 1
Q ss_pred ---hhc----------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 246 ---LRN----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 246 ---l~~----------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+.. ....+..+.+++.+||..||.+||++.++++|+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~ 294 (313)
T 3cek_A 246 ISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 294 (313)
T ss_dssp HHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred HHHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 110 123456789999999999999999999999998
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.98 E-value=4.5e-32 Score=288.54 Aligned_cols=243 Identities=15% Similarity=0.152 Sum_probs=187.9
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCC---cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGS---PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~---~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~ 92 (778)
....|.+++.||.|+ | +||+|++..++. .|+||++... ......+.+.+|+++++.++||||+++++++....
T Consensus 19 ~~~~~~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 95 (298)
T 3pls_A 19 ERVVTHSDRVIGKGHFG--VVYHGEYIDQAQNRIQCAIKSLSRI-TEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPE 95 (298)
T ss_dssp GGEEEEEEEEEEEETTE--EEEEEEEECSSSCEEEEEEEEETTC-CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSS
T ss_pred cceEEccCceeccCCCc--eEEEEEEecCCCceeeeeeeecccc-ccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCC
Confidence 345688889999998 8 999999766655 7999998753 33345678899999999999999999999997643
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEE
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
...|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||
T Consensus 96 -------~~~~~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH~-~~i~H~dikp~Nili~~~~~~kl 165 (298)
T 3pls_A 96 -------GLPHVLLPYMCHGDLLQFIRSPQR--NPTVKDLISFGLQVARGMEYLAE-QKFVHRDLAARNCMLDESFTVKV 165 (298)
T ss_dssp -------SCCEEEECCCTTCBHHHHHHCTTC--CCBHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEECTTCCEEE
T ss_pred -------CCcEEEEecccCCCHHHHHhcccc--CCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCcceEEEcCCCcEEe
Confidence 2458999998 579999876432 12344456679999999999996 89999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCC-CCCChhhhh--
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM-RLSKTEELR-- 247 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~-~p~~~~~l~-- 247 (778)
+|||++........... .......++..|+|||.+.+ ..++.++|+|||||++|+|++|+ +++......
T Consensus 166 ~Dfg~~~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~ 237 (298)
T 3pls_A 166 ADFGLARDILDREYYSV--QQHRHARLPVKWTALESLQT------YRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDL 237 (298)
T ss_dssp CCTTSSCTTTTGGGGCS--CCSSCTTCGGGGSCHHHHTT------CCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGH
T ss_pred CcCCCcccccCCccccc--ccCcCCCCCccccChhhhcc------CCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHH
Confidence 99999986654221111 01111233458999999876 35678999999999999999955 444322111
Q ss_pred -----------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 -----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 -----------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+|..+.+++.+||..||.+||++.++++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 281 (298)
T 3pls_A 238 THFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGE 281 (298)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHhhcCCCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 113467789999999999999999999998865
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=99.98 E-value=3.5e-32 Score=289.92 Aligned_cols=243 Identities=15% Similarity=0.171 Sum_probs=185.4
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCC---cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGS---PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~---~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~ 92 (778)
....|++++.||.|+ | +||+|+++.++. .|+||.+... ......+.+.+|++++++++||||+++++++..+
T Consensus 23 ~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~avk~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~- 98 (298)
T 3f66_A 23 SSLIVHFNEVIGRGHFG--CVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS- 98 (298)
T ss_dssp GGEEEEEEEEEEEETTE--EEEEEEEC-----CEEEEEEEETTC-CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCS-
T ss_pred cceehhhcceeeecCCc--eEEEEEEecCCCceeEEEEEecccC-CCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcC-
Confidence 456799999999998 8 999999765443 5899998753 3334567789999999999999999999986543
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEE
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
....|+||||+ ++|.++++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||
T Consensus 99 ------~~~~~~v~e~~~~~~L~~~l~~~~~~--~~~~~~~~i~~ql~~~l~~lH~-~~i~H~dikp~Nil~~~~~~~kl 169 (298)
T 3f66_A 99 ------EGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMKYLAS-KKFVHRDLAARNCMLDEKFTVKV 169 (298)
T ss_dssp ------SSCCEEEEECCTTCBHHHHHHCTTCC--CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEECTTCCEEE
T ss_pred ------CCceEEEEeCCCCCCHHHHHHhcccC--CCHHHHHHHHHHHHHHHHHHHh-CCccCCCCchheEEECCCCCEEE
Confidence 23789999999 4899999764321 2334456668999999999996 89999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhC-CCCCChhhhh--
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG-MRLSKTEELR-- 247 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg-~~p~~~~~l~-- 247 (778)
+|||++........... .......++..|+|||.+.+ ..++.++|+|||||++|+|++| .+++......
T Consensus 170 ~Dfg~a~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~ 241 (298)
T 3f66_A 170 ADFGLARDMYDKEYYSV--HNKTGAKLPVKWMALESLQT------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI 241 (298)
T ss_dssp CSCGGGCCCSCGGGCBC-------CCBCGGGSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTH
T ss_pred Ccccccccccccchhcc--ccccCCCCCccccChHHhcC------CCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHH
Confidence 99999987754321111 01112233457999999876 3567899999999999999994 4555432110
Q ss_pred -----------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 -----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 -----------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+|..+.+++.+||..+|.+||++.++++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~ 285 (298)
T 3f66_A 242 TVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 285 (298)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 123467789999999999999999999999875
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.98 E-value=2.7e-32 Score=289.60 Aligned_cols=241 Identities=15% Similarity=0.135 Sum_probs=188.5
Q ss_pred CCCCceecc-CCCCCC-CceEEEEeEEC--CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecc
Q 004025 17 KDLPYNIGD-PYPSAW-GSWSHFQGTSK--DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (778)
Q Consensus 17 ~~~~Y~i~~-~lg~g~-g~w~Vy~g~~k--~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~ 92 (778)
...+|.+.+ .||.|+ | +||+|+.+ .++..|+||++.... .....+.+.+|+++++.|+||||++++++++.
T Consensus 7 ~~~~~~i~~~~lg~G~~g--~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-- 81 (287)
T 1u59_A 7 KRDNLLIADIELGCGNFG--SVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-- 81 (287)
T ss_dssp CGGGEEEEEEEEECCTTE--EEEEEEEC---CCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES--
T ss_pred cHHHhhhhhccccccCce--eEEEeEeccCCCcceEEEEecCCcc-chhHHHHHHHHHHHHHhCCCCCEeEEEEEecC--
Confidence 345677877 899998 8 89999864 457789999998653 33456778999999999999999999999953
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEE
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
..+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||
T Consensus 82 -------~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nili~~~~~~kl 151 (287)
T 1u59_A 82 -------EALMLVMEMAGGGPLHKFLVGKRE--EIPVSNVAELLHQVSMGMKYLEE-KNFVHRDLAARNVLLVNRHYAKI 151 (287)
T ss_dssp -------SSEEEEEECCTTEEHHHHHTTCTT--TSCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEEEETTEEEE
T ss_pred -------CCcEEEEEeCCCCCHHHHHHhCCc--cCCHHHHHHHHHHHHHHHHHHHH-CCEeeCCCchheEEEcCCCCEEE
Confidence 2689999999 479998864321 12344566779999999999996 89999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh---
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL--- 246 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l--- 246 (778)
+|||++........... ......++..|+|||++.+ ..++.++|+|||||++|+|++ |..||.....
T Consensus 152 ~Dfg~~~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~ 222 (287)
T 1u59_A 152 SDFGLSKALGADDSYYT---ARSAGKWPLKWYAPECINF------RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV 222 (287)
T ss_dssp CCCTTCEECTTCSCEEC---CCCSSCCCGGGCCHHHHHH------CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHH
T ss_pred CcccceeeeccCcceee---ccccccccccccCHHHhcc------CCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHH
Confidence 99999987754321110 0111123457999999875 245679999999999999998 8888854211
Q ss_pred ----h------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 ----R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ----~------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ....+|..+.+++.+||..+|.+||++.+++++.
T Consensus 223 ~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l 267 (287)
T 1u59_A 223 MAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRM 267 (287)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred HHHHhcCCcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 0 1135678899999999999999999999999875
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=3.1e-32 Score=290.23 Aligned_cols=244 Identities=14% Similarity=0.162 Sum_probs=179.2
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhc--CCCCCeeeEeeeeEeccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRT--VRHPNILAFLHSTEVENI 93 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~--LrHPnIlk~~d~~e~e~~ 93 (778)
...+|++.+.||.|+ | +||+|++ +|+.|+||++... ......+|.++++. ++||||+++++.+.....
T Consensus 6 ~~~~y~~~~~lg~G~~g--~V~~~~~--~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~ 76 (301)
T 3q4u_A 6 VARDITLLECVGKGRYG--EVWRGSW--QGENVAVKIFSSR-----DEKSWFRETELYNTVMLRHENILGFIASDMTSRH 76 (301)
T ss_dssp CGGGCEEEEEEEECSSE--EEEEEEE--TTEEEEEEEECGG-----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEET
T ss_pred ccCcEEEEEeeccCCCc--EEEEEEE--CCEEEEEEEeccc-----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccC
Confidence 445799999999998 8 9999987 6899999998643 12334445555554 899999999998765332
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHH--------cCCCccccccCCCCeEEc
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLN--------NDCKLVHGNVCLSSVVVT 163 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH--------~~~~ivH~dLkp~NI~v~ 163 (778)
. ...+|+||||+ ++|.++++... .....+..++.||+.||.||| + .+++||||||+||+++
T Consensus 77 ~----~~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~-~~ivH~Dlkp~Nill~ 147 (301)
T 3q4u_A 77 S----STQLWLITHYHEMGSLYDYLQLTT----LDTVSCLRIVLSIASGLAHLHIEIFGTQGK-PAIAHRDLKSKNILVK 147 (301)
T ss_dssp T----EEEEEEEECCCTTCBHHHHHTTCC----BCHHHHHHHHHHHHHHHHHHHSCBCSTTCB-CEEECSCCCGGGEEEC
T ss_pred C----CceeEEehhhccCCCHHHHHhhcc----cCHHHHHHHHHHHHHHHHHHHHhhhhccCC-CCeecCCCChHhEEEc
Confidence 2 35799999999 48999996543 233445667999999999999 6 8999999999999999
Q ss_pred CCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhC------
Q 004025 164 QTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG------ 237 (778)
Q Consensus 164 ~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg------ 237 (778)
.+|.+||+|||++.......... ........++..|+|||++.+........++.++|+|||||++|||++|
T Consensus 148 ~~~~~kl~Dfg~a~~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~ 225 (301)
T 3q4u_A 148 KNGQCCIADLGLAVMHSQSTNQL--DVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGI 225 (301)
T ss_dssp TTSCEEECCCTTCEEEETTTTEE--ECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTB
T ss_pred CCCCEEEeeCCCeeecccccccc--cccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccc
Confidence 99999999999997665432110 0001122455689999998764210000223589999999999999999
Q ss_pred ----CCCCChh--------hhh-------ccCCCC---------cchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 238 ----MRLSKTE--------ELR-------NTASIP---------KSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 238 ----~~p~~~~--------~l~-------~~~~iP---------~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
..||... ... ....+| ..+.+++.+||..||.+||++.++++.
T Consensus 226 ~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~ 296 (301)
T 3q4u_A 226 VEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKT 296 (301)
T ss_dssp CCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred cccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence 6666321 111 112333 347889999999999999999999864
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=99.97 E-value=5.7e-32 Score=306.87 Aligned_cols=233 Identities=18% Similarity=0.218 Sum_probs=187.2
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
+....|++.+.||.|+ | +||+|+.+ |+.|+||++.... ..+.+.+|+++|++|+||||+++++++..+.
T Consensus 190 i~~~~~~~~~~lG~G~fg--~V~~~~~~--~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-- 259 (450)
T 1k9a_A 190 LNMKELKLLQTIGKGEFG--DVMLGDYR--GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEK-- 259 (450)
T ss_dssp CCGGGEEEEEEEEECSSE--EEEEEEET--TEEEEEEEESSCT----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTT--
T ss_pred cChHHeEEEeeecCcCCe--eEEEEEec--CCeEEEEEeCCch----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCC--
Confidence 3445799999999998 8 99999985 7799999997543 2456889999999999999999999987532
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+||||||+ ++|.+++...+... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 260 -----~~~~iv~e~~~~g~L~~~l~~~~~~~-~~~~~~~~~~~qi~~~l~~LH~-~~ivHrDlkp~Nill~~~~~~kl~D 332 (450)
T 1k9a_A 260 -----GGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEG-NNFVHRDLAARNVLVSEDNVAKVSD 332 (450)
T ss_dssp -----SCEEEEEECCTTCBHHHHHHHHCTTT-CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCCGGGEEECTTSCEEECC
T ss_pred -----CceEEEEEecCCCcHHHHHHhcCCCC-CCHHHHHHHHHHHHHHHHHHHh-CCeeCCCCCHhhEEECCCCCEEEee
Confidence 3699999999 58999998765321 1234456679999999999996 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR---- 247 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~---- 247 (778)
||+++...... .....+..|+|||++.+ ..++.++|+|||||++|||++ |..||......
T Consensus 333 fG~a~~~~~~~---------~~~~~~~~y~aPE~~~~------~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~ 397 (450)
T 1k9a_A 333 FGLTKEASSTQ---------DTGKLPVKWTAPEALRE------KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVP 397 (450)
T ss_dssp CTTCEECC---------------CCCTTTSCHHHHHS------SCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHH
T ss_pred CCCcccccccc---------cCCCCCcceeCHHHhcC------CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 99988654311 11133458999999876 357789999999999999998 88887542211
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 ---------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+|..+.+++.+||..||.+||++.++++.
T Consensus 398 ~i~~~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~ 439 (450)
T 1k9a_A 398 RVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQ 439 (450)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 123567889999999999999999999998764
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-32 Score=309.97 Aligned_cols=244 Identities=17% Similarity=0.224 Sum_probs=177.1
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecccccC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~g~ 96 (778)
.-|.+.+.||.|+ | +||.+. +.+|+.||||++... ..+.+.+|+++|+.+ +||||++++++++++
T Consensus 15 ~~~~~~~~LG~G~~g--~V~~~~-~~~g~~vAvK~~~~~-----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~----- 81 (434)
T 2rio_A 15 NLVVSEKILGYGSSG--TVVFQG-SFQGRPVAVKRMLID-----FCDIALMEIKLLTESDDHPNVIRYYCSETTD----- 81 (434)
T ss_dssp SCEEEEEEEEECSTT--CEEEEE-ESSSSEEEEEEEEGG-----GHHHHHHHHHHHHHHTTSTTBCCEEEEEECS-----
T ss_pred heeeccCeEeeCCCe--EEEEEE-EECCeEEEEEEEcHH-----HHHHHHHHHHHHHhccCCCCcCeEEEEEecC-----
Confidence 3477788899998 8 776543 457999999998752 234678999999876 899999999998763
Q ss_pred CcccEEEEEecCC-cChHHHHHHhCcCCCcc----hHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC------
Q 004025 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQR----DEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT------ 165 (778)
Q Consensus 97 ~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~----~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~------ 165 (778)
..+||||||| ++|.+++.......... ...+..++.||+.||.|||+ .+|+||||||+||+++.+
T Consensus 82 ---~~~~lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~ivHrDLkp~NILl~~~~~~~~~ 157 (434)
T 2rio_A 82 ---RFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS-LKIIHRDLKPQNILVSTSSRFTAD 157 (434)
T ss_dssp ---SEEEEEECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEEECCHHHHSC
T ss_pred ---CeEEEEEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHH-CCccccCCChHhEEEecCcccccc
Confidence 4899999999 68999998754322111 11134469999999999996 899999999999999754
Q ss_pred -------CcEEEEecccccccCCCCCCCCCCccccccccCCCCCCcccccccccc-ccCCCCCcchhHHHHHHHHHHHh-
Q 004025 166 -------LDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTA-VRKSPPWSIDSWGLGCLIYELFS- 236 (778)
Q Consensus 166 -------g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~-~~~~~~~~~DiwSLG~liyel~t- 236 (778)
+.+||+|||++........... .......++..|+|||++.+.... ....++.++|+|||||++|||++
T Consensus 158 ~~~~~~~~~~kL~DFG~a~~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~ 235 (434)
T 2rio_A 158 QQTGAENLRILISDFGLCKKLDSGQSSFR--TNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSK 235 (434)
T ss_dssp CTTCCCSCEEEECCCTTCEECCC----------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred cccCCCceEEEEcccccceecCCCCccce--eeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhC
Confidence 4899999999988765321110 011123456699999998752211 11357789999999999999998
Q ss_pred CCCCCChhh------hhccCC-----------CCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 237 GMRLSKTEE------LRNTAS-----------IPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 237 g~~p~~~~~------l~~~~~-----------iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
|..||.... +..... ++..+.+++.+||..||.+||++.++++|+
T Consensus 236 g~~Pf~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp 297 (434)
T 2rio_A 236 GKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297 (434)
T ss_dssp SCCTTCSTTTHHHHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred CCCCCCCchhhHHHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCC
Confidence 888875421 111111 224578889999999999999999999998
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-32 Score=287.87 Aligned_cols=233 Identities=18% Similarity=0.228 Sum_probs=180.1
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
+...+|++.+.||.|+ | +||.|+++ |+.|+||++.... ..+.+.+|+++++.++||||+++++++..+
T Consensus 18 ~~~~~y~~~~~lg~G~~g--~V~~~~~~--~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--- 86 (278)
T 1byg_A 18 LNMKELKLLQTIGKGEFG--DVMLGDYR--GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEE--- 86 (278)
T ss_dssp CCGGGEEEEEEEEECSSC--EEEEEEET--TEEEEEEECCCCC------HHHHHTHHHHTTCCCTTBCCEEEEECCC---
T ss_pred CChhhceEEeEEecCCCc--eEEEEEEc--CCEEEEEEecchh----HHHHHHHHHHHHHhCCCCCEeeEEEEEEcC---
Confidence 3445799999999998 8 99999875 8899999987542 345688999999999999999999987543
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
...+|+||||+ ++|.+++....... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 87 ----~~~~~lv~e~~~~~~L~~~l~~~~~~~-~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~Nil~~~~~~~~l~D 160 (278)
T 1byg_A 87 ----KGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEG-NNFVHRDLAARNVLVSEDNVAKVSD 160 (278)
T ss_dssp ------CCEEEECCCTTEEHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEECTTSCEEECC
T ss_pred ----CCceEEEEecCCCCCHHHHHHhccccc-CCHHHHHHHHHHHHHHHHHHHh-CCccccCCCcceEEEeCCCcEEEee
Confidence 23689999999 47999987653210 1233456669999999999996 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR---- 247 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~---- 247 (778)
||++........ ...++..|+|||++.+ ..++.++|+|||||++|+|++ |..||......
T Consensus 161 fg~~~~~~~~~~---------~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~ 225 (278)
T 1byg_A 161 FGLTKEASSTQD---------TGKLPVKWTAPEALRE------KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVP 225 (278)
T ss_dssp CCC---------------------CCTTTSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHH
T ss_pred cccccccccccc---------CCCccccccCHHHhCC------CCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 999876543211 1123458999999875 356789999999999999998 88887543211
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 ---------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+|..+.+++++||..||.+||++.++++.
T Consensus 226 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 267 (278)
T 1byg_A 226 RVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ 267 (278)
T ss_dssp HHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHhcCCCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHH
Confidence 113567789999999999999999999998864
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.4e-32 Score=297.10 Aligned_cols=239 Identities=11% Similarity=0.076 Sum_probs=186.0
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECC--------CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeee-----
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKD--------DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILA----- 83 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~--------~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk----- 83 (778)
..+|++.+.||.|+ | +||+|+++. +++.|+||++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g--~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~ 111 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQG--ILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------GRLFNEQNFFQRAAKPLQVNKWKKL 111 (352)
T ss_dssp SCEEEEEEEEEEETTE--EEEEEEECC-----------CEEEEEEETT-------STHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred CCeEEEEEEecCCCCe--EEEEEeecCCccccccccCceEEEEEeccc-------chHHHHHHHHHHhcccchhhhhhhh
Confidence 46899999999998 8 999999987 4899999999854 24778999999999999988
Q ss_pred ----------EeeeeEecccccCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccc
Q 004025 84 ----------FLHSTEVENIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVH 152 (778)
Q Consensus 84 ----------~~d~~e~e~~~g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH 152 (778)
+++++..+ ...+||||||+ ++|.+++...... ......+..++.||+.||.|||+ .+++|
T Consensus 112 ~~~~~~~i~~~~~~~~~~-------~~~~~lv~e~~~~~L~~~l~~~~~~-~l~~~~~~~i~~qi~~~L~~LH~-~~ivH 182 (352)
T 2jii_A 112 YSTPLLAIPTCMGFGVHQ-------DKYRFLVLPSLGRSLQSALDVSPKH-VLSERSVLQVACRLLDALEFLHE-NEYVH 182 (352)
T ss_dssp TTCTTCSCCCCCEEEEET-------TTEEEEEEECCCEEHHHHHHHSGGG-CCCHHHHHHHHHHHHHHHHHHHH-TTCBC
T ss_pred ccCCccCccchhhccccC-------CcEEEEEecCCCcCHHHHHHhCCcC-CCCHHHHHHHHHHHHHHHHHHHh-CCccC
Confidence 45555542 24899999999 5799999875211 12344566779999999999996 89999
Q ss_pred cccCCCCeEEcCCC--cEEEEecccccccCCCCCCCCC-CccccccccCCCCCCccccccccccccCCCCCcchhHHHHH
Q 004025 153 GNVCLSSVVVTQTL--DWKLHAFDVLSEFDGNNEAANG-PMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGC 229 (778)
Q Consensus 153 ~dLkp~NI~v~~~g--~~KL~dFgla~~~~~~~~~~~~-~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~ 229 (778)
|||||+||+++.+| .+||+|||++..+......... ........++..|+|||++.+ ..++.++|+|||||
T Consensus 183 ~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Di~slG~ 256 (352)
T 2jii_A 183 GNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKG------CGPSRRSDLQSLGY 256 (352)
T ss_dssp SCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTT------CCCCHHHHHHHHHH
T ss_pred CCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHcc------CCCCchhhHHHHHH
Confidence 99999999999998 9999999999877543211110 001122245569999999876 35778999999999
Q ss_pred HHHHHHhCCCCCChhh-----hh--------cc----------CCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 230 LIYELFSGMRLSKTEE-----LR--------NT----------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 230 liyel~tg~~p~~~~~-----l~--------~~----------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
++|||++|..||.... +. .. ..+|..+.+++.+||..||.+||++.++++.
T Consensus 257 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 330 (352)
T 2jii_A 257 CMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNN 330 (352)
T ss_dssp HHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHH
T ss_pred HHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHH
Confidence 9999999999886431 10 00 1468889999999999999999999998864
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-32 Score=301.53 Aligned_cols=243 Identities=16% Similarity=0.180 Sum_probs=179.1
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCC---CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDG---SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g---~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
...|++++.||.|+ | +||+|+.+.++ ..|+||.+.... .....+.+.+|+.++++++||||+++++++...
T Consensus 88 ~~~~~~~~~LG~G~fg--~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~-- 162 (373)
T 3c1x_A 88 SLIVHFNEVIGRGHFG--CVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS-- 162 (373)
T ss_dssp TEEEEEEEEEECCSSS--EEEEEEEEETTTEEEEEEEEECCSCS-CSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCC--
T ss_pred hceeecCcEeeeCCCe--EEEEEEEECCCCcEEEEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcC--
Confidence 34588999999998 8 99999976443 368999987532 334567789999999999999999999986543
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
....|+||||+ ++|.++++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+
T Consensus 163 -----~~~~~lv~e~~~~g~L~~~l~~~~~~--~~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~~~kL~ 234 (373)
T 3c1x_A 163 -----EGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMKFLAS-KKFVHRDLAARNCMLDEKFTVKVA 234 (373)
T ss_dssp -----SSCCEEEEECCTTCBHHHHHHCTTCC--CBHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEECTTCCEEEC
T ss_pred -----CCCeEEEEECCCCCCHHHHHhhcccC--CCHHHHHHHHHHHHHHHHHHHH-CCEecCccchheEEECCCCCEEEe
Confidence 23689999999 5899999764322 2334456678999999999996 899999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh---
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR--- 247 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~--- 247 (778)
|||+++.+....... ........++..|+|||++.+ ..++.++|+|||||++|||++ |.+||......
T Consensus 235 DFG~a~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~ 306 (373)
T 3c1x_A 235 DFGLARDMYDKEFDS--VHNKTGAKLPVKWMALESLQT------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT 306 (373)
T ss_dssp CC-----------------------CCGGGSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHH
T ss_pred ecccccccccccccc--ccccCCCCCcccccChHHhcC------CCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHH
Confidence 999998765422111 000111233447999999876 357789999999999999999 56666432110
Q ss_pred ----------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ----------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|..+.+++.+||..+|.+||++.+++++-
T Consensus 307 ~~~~~~~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L 350 (373)
T 3c1x_A 307 VYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 350 (373)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 1134678899999999999999999999998753
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-32 Score=309.63 Aligned_cols=235 Identities=16% Similarity=0.179 Sum_probs=185.8
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
...|++.+.||.|+ | +||+|+.+ ++..|+||++..... ..+.+.+|+++|++|+||||+++++++..
T Consensus 187 ~~~~~~~~~lG~G~fg--~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~l~~~~~~------ 254 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFG--EVWMATYN-KHTKVAVKTMKPGSM---SVEAFLAEANVMKTLQHDKLVKLHAVVTK------ 254 (454)
T ss_dssp GGGEEEEEEEECCSSE--EEEEEEET-TTEEEEEEEECTTSB---CHHHHHHHHHHHTTCCCTTBCCEEEEECS------
T ss_pred hHHeEEEEEcccCCce--EEEEEEEC-CccEEEEEEecCCCc---cHHHHHHHHHHHhhCCCCCEeeEEEEEeC------
Confidence 34689999999998 8 99999986 477899999975432 35678999999999999999999999863
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+||||||+ ++|.++|....... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 255 ---~~~~lv~e~~~~g~L~~~l~~~~~~~-~~~~~~~~~~~qi~~~l~~LH~-~~ivHrDlkp~Nill~~~~~~kl~DFG 329 (454)
T 1qcf_A 255 ---EPIYIITEFMAKGSLLDFLKSDEGSK-QPLPKLIDFSAQIAEGMAFIEQ-RNYIHRDLRAANILVSASLVCKIADFG 329 (454)
T ss_dssp ---SSCEEEECCCTTCBHHHHHHSHHHHT-CCHHHHHHHHHHHHHHHHHHHH-TTCCCSSCSGGGEEECTTCCEEECSTT
T ss_pred ---CccEEEEeecCCCcHHHHHHhccCCC-CCHHHHHHHHHHHHHHHHHHHh-CCccCCCCCHHHEEECCCCcEEEeeCC
Confidence 2689999999 58999997542111 1223355669999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh-------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL------- 246 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l------- 246 (778)
+++......... ......+..|+|||++.. ..++.++|+|||||++|||++ |..||.....
T Consensus 330 ~a~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i 398 (454)
T 1qcf_A 330 LARVIEDNEYTA-----REGAKFPIKWTAPEAINF------GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL 398 (454)
T ss_dssp GGGGBCCHHHHT-----TCSSSSCGGGSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH
T ss_pred CceEcCCCceec-----cCCCcccccccCHHHhcc------CCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 998765421000 011122347999999876 357789999999999999999 8888853211
Q ss_pred h------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 247 R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 247 ~------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. ....+|..+.+++.+||..||.+||++.++++.
T Consensus 399 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~ 438 (454)
T 1qcf_A 399 ERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSV 438 (454)
T ss_dssp HHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HcCCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 1 123567889999999999999999999998764
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-32 Score=289.49 Aligned_cols=241 Identities=13% Similarity=0.172 Sum_probs=180.4
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECC-CCC--cEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEec
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKD-DGS--PVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~-~g~--~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e 91 (778)
...+|++.+.||.|+ | +||+|+++. ++. .|+||++...... ....+.+.+|+++++.++||||+++++++..+
T Consensus 16 ~~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 93 (291)
T 1u46_A 16 GEKDLRLLEKLGDGSFG--VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP 93 (291)
T ss_dssp CGGGEEEEEECC----C--CCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred chhHeeeeeeecCCCce--eEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccC
Confidence 345799999999998 8 899998653 333 6899998764322 24567889999999999999999999999753
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEE
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~K 169 (778)
.+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+|
T Consensus 94 ---------~~~~v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dikp~Nili~~~~~~k 161 (291)
T 1u46_A 94 ---------PMKMVTELAPLGSLLDRLRKHQG--HFLLGTLSRYAVQVAEGMGYLES-KRFIHRDLAARNLLLATRDLVK 161 (291)
T ss_dssp ---------SCEEEEECCTTCBHHHHHHHHGG--GSCHHHHHHHHHHHHHHHHHHHH-TTEECSCCCGGGEEEEETTEEE
T ss_pred ---------CceeeEecccCCCHHHHHHhccC--CcCHHHHHHHHHHHHHHHHHHHh-CCcccCCCchheEEEcCCCCEE
Confidence 479999999 589998876531 12344566679999999999996 8999999999999999999999
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh--
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL-- 246 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l-- 246 (778)
|+|||++.......... .......++..|+|||++.+. .++.++|+|||||++|+|++ |..||.....
T Consensus 162 l~Dfg~~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~ 232 (291)
T 1u46_A 162 IGDFGLMRALPQNDDHY---VMQEHRKVPFAWCAPESLKTR------TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ 232 (291)
T ss_dssp ECCCTTCEECCC-CCEE---EC-----CCGGGCCHHHHHHC------EEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH
T ss_pred Eccccccccccccccch---hhhccCCCCceeeCchhhcCC------CCCchhhHHHHHHHHHHHHhCCCCCcccCCHHH
Confidence 99999998775432110 001111233479999998752 45678999999999999999 8888753211
Q ss_pred ------------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 247 ------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 247 ------------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
.....+|..+.+++.+||..||.+||++.++++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 278 (291)
T 1u46_A 233 ILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDF 278 (291)
T ss_dssp HHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHccCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 0113567789999999999999999999999865
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-32 Score=287.27 Aligned_cols=237 Identities=16% Similarity=0.190 Sum_probs=186.6
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
+....|++.+.||.|+ | +||+|+++ ++..|+||++...... .+.+.+|+++|+.++||||+++++++..+
T Consensus 10 v~~~~y~~~~~lg~G~~g--~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--- 80 (279)
T 1qpc_A 10 VPRETLKLVERLGAGQFG--EVWMGYYN-GHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVVTQE--- 80 (279)
T ss_dssp CCGGGEEEEEEEEEETTE--EEEEEEET-TTEEEEEEEECTTSSC---HHHHHHHHHHHHHCCCTTBCCEEEEECSS---
T ss_pred cCHHhhhheeeecCCCCe--EEEEEEEc-CCcEEEEEEecCCccc---HHHHHHHHHHHHhCCCcCcceEEEEEcCC---
Confidence 4456799999999998 8 99999976 5678999999754322 45688999999999999999999988632
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
.+|+||||+ ++|.+++...... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 81 ------~~~~v~e~~~~~~L~~~l~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~-~~i~H~dikp~Nil~~~~~~~kl~D 152 (279)
T 1qpc_A 81 ------PIYIITEYMENGSLVDFLKTPSGI-KLTINKLLDMAAQIAEGMAFIEE-RNYIHRDLRAANILVSDTLSCKIAD 152 (279)
T ss_dssp ------SCEEEEECCTTCBHHHHTTSHHHH-TCCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECTTSCEEECC
T ss_pred ------CcEEEEecCCCCCHHHHHhcCCCC-CCCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHhhEEEcCCCCEEECC
Confidence 589999999 5799988653210 12234456679999999999996 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh-----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL----- 246 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l----- 246 (778)
||++.......... .....++..|+|||++.+. .++.++|+|||||++|||++ |..||.....
T Consensus 153 fg~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~ 221 (279)
T 1qpc_A 153 FGLARLIEDNEYTA-----REGAKFPIKWTAPEAINYG------TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 221 (279)
T ss_dssp CTTCEECSSSCEEC-----CTTCCCCTTTSCHHHHHHC------EECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHH
T ss_pred CcccccccCccccc-----ccCCCCccCccChhhhccC------CCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHH
Confidence 99998775432110 1112234579999998753 45678999999999999999 8878753211
Q ss_pred --h------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 247 --R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 247 --~------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. ....+|..+.+++.+||..+|.+||++.++++.
T Consensus 222 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 263 (279)
T 1qpc_A 222 NLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSV 263 (279)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHhcccCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence 0 114567889999999999999999999998864
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.4e-32 Score=297.32 Aligned_cols=237 Identities=11% Similarity=0.097 Sum_probs=179.4
Q ss_pred CCCceeccCCCCCC-CceEEEEeE-----ECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC---CCCeeeEeeee
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGT-----SKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR---HPNILAFLHST 88 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~-----~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr---HPnIlk~~d~~ 88 (778)
...|.+.+.||.|+ | +||+|+ +..+++.|+||++.... ...+.+|++.++.|+ ||||+++++.+
T Consensus 64 ~~~y~~~~~lG~G~~g--~Vy~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~e~~~~~~l~~~~~~~iv~~~~~~ 136 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFA--QVYEATQGDLNDAKNKQKFVLKVQKPAN-----PWEFYIGTQLMERLKPSMQHMFMKFYSAH 136 (365)
T ss_dssp SSEEEEEEEEEECSSE--EEEEEEC-------CCCCEEEEEESSCC-----HHHHHHHHHHHHHSCGGGGGGBCCEEEEE
T ss_pred CEEEEEEEEeeccCCE--EEEEEEecCCcccccCcEEEEEEeCCCC-----hhHHHHHHHHHHHhhhhhhhhhhhhheee
Confidence 45699999999998 8 999994 67789999999997542 234566777777776 99999999999
Q ss_pred EecccccCCcccEEEEEecCC--cChHHHHHHhCc--CCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC
Q 004025 89 EVENIDATSTKITIYIVTEPV--MPLSEKIKELGL--EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ 164 (778)
Q Consensus 89 e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~--~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~ 164 (778)
..+ ...||||||| ++|.+++..... ........+..++.||+.||.|||+ ++|+||||||+||+++.
T Consensus 137 ~~~--------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~-~~ivHrDiKp~NIll~~ 207 (365)
T 3e7e_A 137 LFQ--------NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD-CEIIHGDIKPDNFILGN 207 (365)
T ss_dssp ECS--------SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHT-TTEECCCCSGGGEEECG
T ss_pred ecC--------CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhh-CCeecCCCCHHHEEecc
Confidence 874 3789999999 589999986432 1223345567779999999999995 99999999999999998
Q ss_pred -----------CCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHH
Q 004025 165 -----------TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYE 233 (778)
Q Consensus 165 -----------~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liye 233 (778)
++.+||+|||++..+..... ........++..|+|||++.+ ..++.++|+|||||++||
T Consensus 208 ~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~e 277 (365)
T 3e7e_A 208 GFLEQDDEDDLSAGLALIDLGQSIDMKLFPK----GTIFTAKCETSGFQCVEMLSN------KPWNYQIDYFGVAATVYC 277 (365)
T ss_dssp GGTCC------CTTEEECCCTTCEEGGGSCT----TEEECCSSCTTSCCCHHHHTT------CCBSTHHHHHHHHHHHHH
T ss_pred cccCccccccccCCEEEeeCchhhhhhccCC----CceeeeecCCCCCCChHHhcC------CCCCccccHHHHHHHHHH
Confidence 89999999999976542211 111122345669999999887 357789999999999999
Q ss_pred HHhCCCCCChhhhh-----c-c--CCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 234 LFSGMRLSKTEELR-----N-T--ASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 234 l~tg~~p~~~~~l~-----~-~--~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
|++|..||....-. . . ...+..+.+++.+||+.+|..|++..+.+.+
T Consensus 278 lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~ 332 (365)
T 3e7e_A 278 MLFGTYMKVKNEGGECKPEGLFRRLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQ 332 (365)
T ss_dssp HHHSSCCCEEEETTEEEECSCCTTCSSHHHHHHHHHHHHCCCCTTCCCCHHHHHH
T ss_pred HHhCCCccccCCCCceeechhccccCcHHHHHHHHHHHcCCCCCCcchHHHHHHH
Confidence 99999887532211 1 1 1234457788899999999999765555444
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-32 Score=293.62 Aligned_cols=242 Identities=14% Similarity=0.192 Sum_probs=188.3
Q ss_pred CCCCceeccCCCCCC-CceEEEEeE----ECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEec
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGT----SKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~----~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e 91 (778)
....|++.+.||.|+ | +||+|+ +..+|+.|+||++... .....+.+.+|+++|+.++||||+++++++...
T Consensus 39 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 114 (326)
T 2w1i_A 39 EERHLKFLQQLGKGNFG--SVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA 114 (326)
T ss_dssp CGGGEEEEEEEECCSSE--EEEEEEECTTSSSCCEEEEEEEESSC--CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC-
T ss_pred CHHHceeeeeeccCCCe--EEEEEEeccccCCCceEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEec
Confidence 344699999999998 7 899998 4668999999999764 234566789999999999999999999998754
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEE
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~K 169 (778)
. ...+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+|
T Consensus 115 ~------~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~-~~ivH~dikp~NIli~~~~~~k 185 (326)
T 2w1i_A 115 G------RRNLKLIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLGT-KRYIHRDLATRNILVENENRVK 185 (326)
T ss_dssp ---------CCEEEECCCTTCBHHHHHHHSTT--SSCHHHHHHHHHHHHHHHHHHHH-TTEECSCCCGGGEEEEETTEEE
T ss_pred C------CCceEEEEECCCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHh-CCEeccCCCcceEEEcCCCcEE
Confidence 3 23789999999 489999987532 12334456679999999999996 8999999999999999999999
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE---- 245 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~---- 245 (778)
|+|||++.......... ........+..|+|||++.+. .++.++|+|||||++|||++|..++....
T Consensus 186 L~Dfg~~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~ 256 (326)
T 2w1i_A 186 IGDFGLTKVLPQDKEYY---KVKEPGESPIFWYAPESLTES------KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM 256 (326)
T ss_dssp ECCCTTCEECCSSCSEE---ECSSCCSCCGGGCCHHHHHHC------EEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHH
T ss_pred EecCcchhhcccccccc---ccccCCCCceeEECchhhcCC------CCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHH
Confidence 99999998775432100 001111223469999998763 45678999999999999999987764220
Q ss_pred -------------------hh------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 246 -------------------LR------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 246 -------------------l~------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
+. ....+|..+..++.+||..||.+||++.++++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~ 316 (326)
T 2w1i_A 257 RMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALR 316 (326)
T ss_dssp HHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred HhhccccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 00 113567789999999999999999999999864
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-31 Score=303.39 Aligned_cols=239 Identities=15% Similarity=0.235 Sum_probs=174.3
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEeccccc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~g 95 (778)
...|++.+.||.|+ |. ++|.+. .+|+.||||++...... .+.+|+++|+.+ +||||++++++++..
T Consensus 23 ~~~y~~~~~LG~G~~G~-V~~~~~--~~~~~vAvK~~~~~~~~-----~~~~E~~~l~~l~~HpnIv~l~~~~~~~---- 90 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGT-IVYRGM--FDNRDVAVKRILPECFS-----FADREVQLLRESDEHPNVIRYFCTEKDR---- 90 (432)
T ss_dssp TEEEEEEEEEEECGGGC-EEEEEE--SSSSEEEEEEECTTTEE-----ECHHHHHHHHHSCCCTTBCCEEEEEEET----
T ss_pred cEEEecCCeeecCcCEE-EEEEEE--eCCeEEEEEEECHHHHH-----HHHHHHHHHHhccCCCCcCeEEEEEecC----
Confidence 35699999999998 83 244443 47999999999754322 256899999999 799999999998864
Q ss_pred CCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC---CC--cEE
Q 004025 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ---TL--DWK 169 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~---~g--~~K 169 (778)
..+||||||| ++|.+++........... +..++.||+.||.|||+ .+|+||||||+||+++. +| .+|
T Consensus 91 ----~~~~lv~E~~~g~L~~~l~~~~~~~~~~~--~~~i~~qi~~aL~~LH~-~~ivHrDlKp~NIll~~~~~~~~~~~k 163 (432)
T 3p23_A 91 ----QFQYIAIELCAATLQEYVEQKDFAHLGLE--PITLLQQTTSGLAHLHS-LNIVHRDLKPHNILISMPNAHGKIKAM 163 (432)
T ss_dssp ----TEEEEEEECCSEEHHHHHHSSSCCCCSSC--HHHHHHHHHHHHHHHHH-TTCCCCCCSTTSEEECCCBTTTBCCEE
T ss_pred ----CEEEEEEECCCCCHHHHHHhcCCCccchh--HHHHHHHHHHHHHHHHH-CcCEeCCCCHHHEEEecCCCCCceeEE
Confidence 4899999999 679999987653222111 23458999999999996 89999999999999953 33 477
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhhc
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELRN 248 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~~ 248 (778)
|+|||++.......... .......++..|+|||++.+.. ...++.++|+|||||++|||++ |..||.......
T Consensus 164 L~DFG~a~~~~~~~~~~---~~~~~~~gt~~y~APE~l~~~~---~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~ 237 (432)
T 3p23_A 164 ISDFGLCKKLAVGRHSF---SRRSGVPGTEGWIAPEMLSEDC---KENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ 237 (432)
T ss_dssp ECCTTEEECC---------------CCSCTTSCCGGGTSCC------CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHH
T ss_pred EecccceeeccCCCcce---eeccccCCCcCccChhhhhccc---ccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHH
Confidence 99999998775432110 1112234567999999987421 1356679999999999999999 777875432111
Q ss_pred ---------cCCC------CcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ---------TASI------PKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ---------~~~i------P~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+ +..+.+++.+||..||.+||++.++++|+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp 285 (432)
T 3p23_A 238 ANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHP 285 (432)
T ss_dssp HHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTST
T ss_pred HHHHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCc
Confidence 0111 12367889999999999999999999998
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.3e-32 Score=291.06 Aligned_cols=248 Identities=15% Similarity=0.099 Sum_probs=184.5
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
+...+|++++.||.|+ | +||+|+++. .|+||++..........+.+.+|+.++++++||||+++++++..+
T Consensus 30 i~~~~~~~~~~lg~G~~g--~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--- 101 (319)
T 2y4i_B 30 IPFEQLEIGELIGKGRFG--QVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSP--- 101 (319)
T ss_dssp SCCSCEECCCBCCCSSSS--EEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECS---
T ss_pred CCHHHeEEeeEeccCCce--EEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecC---
Confidence 4556899999999998 8 999999853 599999986544433445577899999999999999999999864
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++ +|.+||+|
T Consensus 102 -----~~~~iv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~-~~i~H~dlkp~NIl~~-~~~~~l~D 172 (319)
T 2y4i_B 102 -----PHLAIITSLCKGRTLYSVVRDAKI--VLDVNKTRQIAQEIVKGMGYLHA-KGILHKDLKSKNVFYD-NGKVVITD 172 (319)
T ss_dssp -----SCEEEECBCCCSEEHHHHTTSSCC--CCCSHHHHHHHHHHHHHHHHHHH-TTCCCCCCCSTTEEEC---CCEECC
T ss_pred -----CceEEEeecccCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHh-CCccccCCChhhEEEe-CCCEEEee
Confidence 3799999999 479998876431 12334466779999999999996 8999999999999998 78999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCcccccccccc---ccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc-
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTA---VRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN- 248 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~---~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~- 248 (778)
||++............ .......+...|+|||++.+.... ....++.++|+|||||++|||++|..||.......
T Consensus 173 fg~~~~~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~ 251 (319)
T 2y4i_B 173 FGLFSISGVLQAGRRE-DKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAI 251 (319)
T ss_dssp CSCCC----------C-CSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHH
T ss_pred cCCccccccccccccc-cccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 9998765432111100 001112344589999998752100 01346779999999999999999998886432110
Q ss_pred -------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+|..+.+++.+||..||.+||++.++++.-
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l 297 (319)
T 2y4i_B 252 IWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDML 297 (319)
T ss_dssp HHHHHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHH
T ss_pred HHHhccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHH
Confidence 125788999999999999999999999998753
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-31 Score=288.60 Aligned_cols=237 Identities=14% Similarity=0.151 Sum_probs=174.6
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHH--hcCCCCCeeeEeeeeEeccccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRL--RTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~L--k~LrHPnIlk~~d~~e~e~~~g 95 (778)
..|++.+.||.|+ | +||+|+++ |+.|+||++.... .....+|.+++ ..++||||+++++++......
T Consensus 37 ~~y~~~~~lg~G~~g--~V~~~~~~--~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~- 106 (337)
T 3mdy_A 37 KQIQMVKQIGKGRYG--EVWMGKWR--GEKVAVKVFFTTE-----EASWFRETEIYQTVLMRHENILGFIAADIKGTGS- 106 (337)
T ss_dssp HHCEEEEEEEEETTE--EEEEEEET--TEEEEEEEEEGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGG-
T ss_pred cceEEEeEeecCCCe--EEEEEEEC--CceEEEEEEeccc-----cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCC-
Confidence 3699999999998 8 99999985 8999999996431 12233344444 445899999999999875321
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCC--------CccccccCCCCeEEcCC
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDC--------KLVHGNVCLSSVVVTQT 165 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~--------~ivH~dLkp~NI~v~~~ 165 (778)
...+||||||+ ++|.++++.... ....+..++.||+.||.|||+ . +++||||||+||+++.+
T Consensus 107 ---~~~~~lv~e~~~~g~L~~~l~~~~~----~~~~~~~i~~~i~~~l~~lH~-~~~~~~~~~~ivH~Dikp~Nill~~~ 178 (337)
T 3mdy_A 107 ---WTQLYLITDYHENGSLYDYLKSTTL----DAKSMLKLAYSSVSGLCHLHT-EIFSTQGKPAIAHRDLKSKNILVKKN 178 (337)
T ss_dssp ---GCEEEEEECCCTTCBHHHHHHHCCB----CHHHHHHHHHHHHHHHHHHHS-CBCSTTCBCCEECSCCCGGGEEECTT
T ss_pred ---CCceEEEEeccCCCcHHHHhhccCC----CHHHHHHHHHHHHHHHHHHHH-hhhhhccCCCEEecccchHHEEECCC
Confidence 25899999999 489999977542 344456679999999999996 6 99999999999999999
Q ss_pred CcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCC------cchhHHHHHHHHHHHhC--
Q 004025 166 LDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPW------SIDSWGLGCLIYELFSG-- 237 (778)
Q Consensus 166 g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~------~~DiwSLG~liyel~tg-- 237 (778)
|.+||+|||++..+....... ........++..|+|||++.+. .... ++|+|||||++|||++|
T Consensus 179 ~~~kl~Dfg~a~~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~------~~~~~~~~~~~~DiwslG~il~el~tg~~ 250 (337)
T 3mdy_A 179 GTCCIADLGLAVKFISDTNEV--DIPPNTRVGTKRYMPPEVLDES------LNRNHFQSYIMADMYSFGLILWEVARRCV 250 (337)
T ss_dssp SCEEECCCTTCEECC-----------CCSSCSCGGGCCHHHHTTC------CCTTCTHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred CCEEEEeCCCceeeccccccc--cCCCCCCccCcceeChhhcccc------cCCccccCccccchHHHHHHHHHHHhccC
Confidence 999999999998765432111 1111123455689999998763 2222 38999999999999999
Q ss_pred --------CCCCChh--------hhhc-------cCC---------CCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 238 --------MRLSKTE--------ELRN-------TAS---------IPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 238 --------~~p~~~~--------~l~~-------~~~---------iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
..||... .... ... +|..+.+++.+||..||.+||++.+++++-
T Consensus 251 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L 326 (337)
T 3mdy_A 251 SGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTL 326 (337)
T ss_dssp BTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred cccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHH
Confidence 4444321 1100 112 233478899999999999999999999864
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-31 Score=288.21 Aligned_cols=251 Identities=16% Similarity=0.189 Sum_probs=180.0
Q ss_pred CCCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 15 GVKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 15 ~~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
++...+|++.+.||.|+ | +||+|+. +++.|+||++..... .......++..++.++||||+++++.+.....
T Consensus 9 ~~~~~~y~~~~~lg~G~~g--~Vy~~~~--~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~ 81 (336)
T 3g2f_A 9 SLDLDNLKLLELIGRGRYG--AVYKGSL--DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTA 81 (336)
T ss_dssp CCCTTSEEEEEEEEECSSE--EEEEEEE--TTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECT
T ss_pred CcChHHhheeeecccCCCe--EEEEEEE--CCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheeccccccc
Confidence 34556899999999998 8 8999976 689999999975321 12223455556667899999999987654322
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCC---------CccccccCCCCeEE
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDC---------KLVHGNVCLSSVVV 162 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~---------~ivH~dLkp~NI~v 162 (778)
++ ...+||||||| ++|.++++.... ....+..++.||+.||.|||+ . +++||||||+||++
T Consensus 82 ~~---~~~~~lv~e~~~~g~L~~~l~~~~~----~~~~~~~i~~qi~~~L~~LH~-~~~~~~~~~~~ivH~Dikp~Nill 153 (336)
T 3g2f_A 82 DG---RMEYLLVMEYYPNGSLXKYLSLHTS----DWVSSCRLAHSVTRGLAYLHT-ELPRGDHYKPAISHRDLNSRNVLV 153 (336)
T ss_dssp TS---CEEEEEEECCCTTCBHHHHHHHCCB----CHHHHHHHHHHHHHHHHHHHC-CBCCGGGCBCCEECSSCSGGGEEE
T ss_pred CC---CceEEEEEecCCCCcHHHHHhhccc----chhHHHHHHHHHHHHHHHHHh-hhccccccccceeecccccceEEE
Confidence 21 45789999999 489999987654 233355569999999999996 7 99999999999999
Q ss_pred cCCCcEEEEecccccccCCCCCCCCC--CccccccccCCCCCCccccccccccc-cCCCCCcchhHHHHHHHHHHHhCCC
Q 004025 163 TQTLDWKLHAFDVLSEFDGNNEAANG--PMLQYAWLVGAQYKPVELAKSDWTAV-RKSPPWSIDSWGLGCLIYELFSGMR 239 (778)
Q Consensus 163 ~~~g~~KL~dFgla~~~~~~~~~~~~--~~~~~~~~~~~~Y~aPE~~~~~~~~~-~~~~~~~~DiwSLG~liyel~tg~~ 239 (778)
+.+|.+||+|||++..+......... ........++..|+|||++.+..... ...++.++|+|||||++|||++|..
T Consensus 154 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~ 233 (336)
T 3g2f_A 154 KNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCT 233 (336)
T ss_dssp CTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBG
T ss_pred cCCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCC
Confidence 99999999999999877543211100 11111224556899999987631110 0123458999999999999999964
Q ss_pred CC-Chhhh---------------------------hccCCCCc----------chHHHHHHHhccCCCCCCChHHHHhc
Q 004025 240 LS-KTEEL---------------------------RNTASIPK----------SLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 240 p~-~~~~l---------------------------~~~~~iP~----------~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
++ ..... .....+|. .+.+++.+||..||.+||++.++++.
T Consensus 234 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~ 312 (336)
T 3g2f_A 234 DLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEER 312 (336)
T ss_dssp GGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred cCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHH
Confidence 43 21110 00122332 48899999999999999999999864
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.7e-31 Score=299.99 Aligned_cols=241 Identities=12% Similarity=0.073 Sum_probs=189.2
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
..+|++++.||.|+ | +||+|+++.+++.|+||++....... .+.+|+++++.|+|++++..+..+..+
T Consensus 6 ~~~y~i~~~LG~G~fG--~Vy~a~~~~~~~~vAvK~~~~~~~~~----~~~~E~~il~~L~~~~~i~~i~~~~~~----- 74 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFG--EIYLGTNIQTNEEVAIKLENVKTKHP----QLLYESKIYRILQGGTGIPNVRWFGVE----- 74 (483)
T ss_dssp TTTEECCCCCEECSSC--EEEEEEETTTCCEEEEEEEETTCSSC----CHHHHHHHHHHTTTSTTCCCEEEEEEE-----
T ss_pred CCcEEEEEEEeeCCCE--EEEEEEECCCCcEEEEEEeccccccH----HHHHHHHHHHHhcCCCCCCeEEEEEee-----
Confidence 45799999999998 8 99999999999999999988654333 367899999999986555555544433
Q ss_pred CcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEE---cCCCcEEEEe
Q 004025 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV---TQTLDWKLHA 172 (778)
Q Consensus 97 ~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v---~~~g~~KL~d 172 (778)
....||||||+ ++|.+++..... ......+..++.||+.||.|||+ .+|+||||||+|||| +.++.+||+|
T Consensus 75 --~~~~~lvme~~g~sL~~ll~~~~~--~l~~~~~~~i~~qi~~aL~yLH~-~gIvHrDIKP~NILl~~~~~~~~vkL~D 149 (483)
T 3sv0_A 75 --GDYNVLVMDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIID 149 (483)
T ss_dssp --TTEEEEEEECCCCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEECCGGGTTCEEECC
T ss_pred --CCEEEEEEECCCCCHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHH-CCEeecccCcceEEEecCCCCCeEEEEe
Confidence 34899999999 579999986432 12344566779999999999996 899999999999999 6889999999
Q ss_pred cccccccCCCCCCCCCCcccc-ccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh------
Q 004025 173 FDVLSEFDGNNEAANGPMLQY-AWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE------ 245 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~-~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~------ 245 (778)
||++..+.........++... ...++..|+|||++.+ ..++.++|||||||+||||++|..||....
T Consensus 150 FGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~------~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~ 223 (483)
T 3sv0_A 150 FGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLG------IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQ 223 (483)
T ss_dssp CTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT------CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHH
T ss_pred CCcceeccCCccccccccccccccCCCccccCHHHhcC------CCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHH
Confidence 999988765432211111111 2345569999999887 357789999999999999999999985411
Q ss_pred -hh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 246 -LR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 246 -l~-------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
+. ....+|..+.+++.+||..+|..||++.++++.
T Consensus 224 ~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~ 272 (483)
T 3sv0_A 224 KYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRL 272 (483)
T ss_dssp HHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHH
T ss_pred HHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 00 115788999999999999999999999988753
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-31 Score=304.16 Aligned_cols=236 Identities=18% Similarity=0.164 Sum_probs=181.7
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
....|++.++||.|+ | +||+|+++. +..|+||++...... .+.+.+|+++|++|+||||+++++++..+
T Consensus 182 ~~~~~~~~~~lG~G~fg--~Vy~~~~~~-~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hp~iv~~~~~~~~~---- 251 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFG--EVWMGTWNG-TTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSEE---- 251 (452)
T ss_dssp CGGGEEEEEEEEECSSC--EEEEEEETT-TEEEEEEECCTTSSC---HHHHHHHHHHHHHCCCTTBCCEEEEECSS----
T ss_pred ChhHceeeeeecCCCCe--EEEEEEECC-CceEEEEEeccCCCC---HHHHHHHHHHHHhCCCCCEeeEEEEEcCC----
Confidence 344689999999998 8 999999874 467999999764322 35688999999999999999999988642
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
.+||||||+ ++|.+++....... .....+..++.||+.||.|||+ .+++||||||+||+++.++.+||+||
T Consensus 252 -----~~~iv~e~~~~gsL~~~l~~~~~~~-~~~~~~~~i~~qi~~~l~~LH~-~~ivHrDlkp~Nill~~~~~~kl~Df 324 (452)
T 1fmk_A 252 -----PIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER-MNYVHRDLRAANILVGENLVCKVADF 324 (452)
T ss_dssp -----SCEEEECCCTTCBHHHHHSHHHHTT-CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEECGGGCEEECCC
T ss_pred -----ceEEEehhhcCCCHHHHHHhcCCCC-CCHHHHHHHHHHHHHHHHHHHh-CCeeCCCCChhhEEECCCCCEEECCC
Confidence 589999999 58999997532111 2233456669999999999996 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL------ 246 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l------ 246 (778)
|+++........ ......++..|+|||++.+ ..++.++|+|||||++|||++ |..||.....
T Consensus 325 G~a~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~------~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~ 393 (452)
T 1fmk_A 325 GLARLIEDNEYT-----ARQGAKFPIKWTAPEAALY------GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 393 (452)
T ss_dssp CTTC-------------------CCGGGSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH
T ss_pred ccceecCCCcee-----cccCCcccccccCHhHHhc------CCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 999876542110 0111223447999999876 357789999999999999999 8888754211
Q ss_pred -h------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 247 -R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 247 -~------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. ....+|..+.+++.+||..||.+||++.++++.
T Consensus 394 i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~ 434 (452)
T 1fmk_A 394 VERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAF 434 (452)
T ss_dssp HHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 1 113567789999999999999999999998864
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-30 Score=277.59 Aligned_cols=214 Identities=19% Similarity=0.255 Sum_probs=172.6
Q ss_pred CCceec-cCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHH-hcCCCCCeeeEeeeeEeccccc
Q 004025 19 LPYNIG-DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRL-RTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 19 ~~Y~i~-~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~L-k~LrHPnIlk~~d~~e~e~~~g 95 (778)
.+|.+. +.||.|+ | +||.|+++.+|+.|+||++... ..+.+|+.++ +.++||||++++++++....+
T Consensus 17 ~~y~~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~-------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~- 86 (299)
T 3m2w_A 17 DDYKVTSQVLGLGING--KVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAG- 86 (299)
T ss_dssp GTEEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT-
T ss_pred cchhhcCcccccCCCe--EEEEEEEcCCCcEEEEEEeccc-------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCC-
Confidence 468877 6799998 8 9999999999999999999742 2466788887 667899999999999762111
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC---CCcEEE
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ---TLDWKL 170 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~---~g~~KL 170 (778)
...+||||||+ ++|.+++...... ......+..++.||+.||.|||+ .+++||||||+||+++. ++.+||
T Consensus 87 ---~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~-~~i~H~dlkp~Nil~~~~~~~~~~kl 161 (299)
T 3m2w_A 87 ---RKCLLIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKL 161 (299)
T ss_dssp ---EEEEEEEECCCCSCBHHHHHHHCTTC-CCBHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEESSSSTTCCEEE
T ss_pred ---CceEEEEEeecCCCcHHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEEecCCCCCcEEE
Confidence 34899999999 4899999875422 23345566779999999999996 89999999999999998 789999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc--
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN-- 248 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~-- 248 (778)
+|||++..... ..++.++|+|||||++|||++|..||.......
T Consensus 162 ~Dfg~a~~~~~----------------------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~ 207 (299)
T 3m2w_A 162 TDFGFAKETTG----------------------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS 207 (299)
T ss_dssp CCCTTCEECTT----------------------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------
T ss_pred ecccccccccc----------------------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh
Confidence 99999865432 123457999999999999999999885432110
Q ss_pred ------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+|..+.+++.+||..||.+||++.++++|+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp 258 (299)
T 3m2w_A 208 PGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 258 (299)
T ss_dssp CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred HHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcCh
Confidence 035677899999999999999999999999998
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-31 Score=311.68 Aligned_cols=237 Identities=16% Similarity=0.144 Sum_probs=182.1
Q ss_pred Cceecc-CCCCCC-CceEEEEeEECC--CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 20 PYNIGD-PYPSAW-GSWSHFQGTSKD--DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 20 ~Y~i~~-~lg~g~-g~w~Vy~g~~k~--~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
.|.+.+ +||.|+ | +||+|..+. ++..|+||++..... ....+.+.+|+++|+.|+||||++++++++.+
T Consensus 336 ~~~~~~~~LG~G~fG--~Vy~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~---- 408 (613)
T 2ozo_A 336 NLLIADIELGCGNFG--SVRQGVYRMRKKQIDVAIKVLKQGTE-KADTEEMMREAQIMHQLDNPYIVRLIGVCQAE---- 408 (613)
T ss_dssp SEEEEEEEEEECSSS--EEEEEEEECSSCEEEEEEEECCCCCS-STTHHHHHHHHHHHTTCCCTTBCCEEEEEESS----
T ss_pred ceeEcCcEEecCCCc--EEEEEEEecCCCcEEEEEEEcCCCCC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEeccC----
Confidence 344555 789998 8 999998763 456799999976432 23466789999999999999999999998752
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
.+||||||| ++|.+++..... ......+..++.||+.||.|||+ .+|+||||||+||+|+.+|.+||+||
T Consensus 409 -----~~~lv~E~~~~g~L~~~l~~~~~--~l~~~~~~~i~~qi~~~L~~LH~-~~iiHrDlkp~NILl~~~~~vkL~DF 480 (613)
T 2ozo_A 409 -----ALMLVMEMAGGGPLHKFLVGKRE--EIPVSNVAELLHQVSMGMKYLEE-KNFVHRNLAARNVLLVNRHYAKISDF 480 (613)
T ss_dssp -----SEEEEEECCTTCBHHHHHTTCTT--TSCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEEEETTEEEECCC
T ss_pred -----CeEEEEEeCCCCcHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHH-CCEEcCcCCHHHEEEcCCCcEEEeec
Confidence 589999999 579998865321 12344566779999999999996 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL------ 246 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l------ 246 (778)
|+++.+........ .......+..|+|||++.+ ..++.++|+|||||++|||++ |..||.....
T Consensus 481 Gla~~~~~~~~~~~---~~~~~~~~~~y~APE~~~~------~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~ 551 (613)
T 2ozo_A 481 GLSKALGADDSYYT---ARSAGKWPLKWYAPECINF------RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAF 551 (613)
T ss_dssp STTTTCC-----------------CCTTSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHH
T ss_pred cCcccccCCCceee---eccCCCCccceeCHhhhcC------CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
Confidence 99987654221100 0111123458999999876 367789999999999999998 8888854211
Q ss_pred -h------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 247 -R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 247 -~------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. ....+|..+.+++.+||..+|.+||++.++++.
T Consensus 552 i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~ 592 (613)
T 2ozo_A 552 IEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQR 592 (613)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHH
T ss_pred HHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 1 113577889999999999999999999998764
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-31 Score=315.02 Aligned_cols=232 Identities=15% Similarity=0.160 Sum_probs=182.4
Q ss_pred CCCCCC-CceEEEEeEE--CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcccEE
Q 004025 26 PYPSAW-GSWSHFQGTS--KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITI 102 (778)
Q Consensus 26 ~lg~g~-g~w~Vy~g~~--k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~~~l 102 (778)
+||.|+ | +||+|.. +.++..|+||++..........+.+.+|+++|+.|+||||++++++++.+ .+
T Consensus 376 ~LG~G~fG--~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~---------~~ 444 (635)
T 4fl3_A 376 ELGSGNFG--TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE---------SW 444 (635)
T ss_dssp EEEECSSE--EEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESS---------SE
T ss_pred EeccCCCE--EEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---------CE
Confidence 689988 8 9999954 56678999999986544445567899999999999999999999998642 58
Q ss_pred EEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccC
Q 004025 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (778)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~ 180 (778)
||||||+ ++|.+++..... .....+..++.||+.||.|||+ .+|+||||||+||+|+.+|.+||+|||+++.+.
T Consensus 445 ~lv~E~~~~g~L~~~l~~~~~---l~~~~~~~i~~qi~~~L~yLH~-~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~ 520 (635)
T 4fl3_A 445 MLVMEMAELGPLNKYLQQNRH---VKDKNIIELVHQVSMGMKYLEE-SNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 520 (635)
T ss_dssp EEEEECCTTEEHHHHHHHCTT---CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEEEETTEEEECCTTHHHHTT
T ss_pred EEEEEccCCCCHHHHHhhCCC---CCHHHHHHHHHHHHHHHHHHHH-CCEeCCCCChHhEEEeCCCCEEEEEcCCccccc
Confidence 9999999 579999976542 2344466679999999999996 899999999999999999999999999998775
Q ss_pred CCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh------------
Q 004025 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR------------ 247 (778)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~------------ 247 (778)
....... ......++..|+|||++.+ ..++.++|+|||||++|||++ |..||......
T Consensus 521 ~~~~~~~---~~~~~~~t~~y~APE~~~~------~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~ 591 (635)
T 4fl3_A 521 ADENYYK---AQTHGKWPVKWYAPECINY------YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM 591 (635)
T ss_dssp C----------------CGGGSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC
T ss_pred cCccccc---cccCCCCceeeeChhhhcC------CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC
Confidence 4321100 0111123347999999876 367789999999999999998 98888642211
Q ss_pred -ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|..+.+++.+||..||.+||++.++++.-
T Consensus 592 ~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L 626 (635)
T 4fl3_A 592 GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 626 (635)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHH
Confidence 1235677899999999999999999999998753
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.1e-31 Score=285.09 Aligned_cols=243 Identities=13% Similarity=0.147 Sum_probs=181.1
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhc--CCCCCeeeEeeeeEecccccC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRT--VRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~--LrHPnIlk~~d~~e~e~~~g~ 96 (778)
.|++.+.||.|+ | +||+|++ +|+.|+||++... ....+.+|+++++. ++||||+++++++..+...
T Consensus 43 ~y~~~~~lg~G~~g--~Vy~~~~--~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~-- 111 (342)
T 1b6c_B 43 TIVLQESIGKGRFG--EVWRGKW--RGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGT-- 111 (342)
T ss_dssp HCEEEEEEEEETTE--EEEEEEE--TTEEEEEEEECGG-----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSS--
T ss_pred cEEEEeeecCCCCc--EEEEEEE--cCccEEEEEeCch-----hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCc--
Confidence 699999999998 8 9999998 4899999999642 23456678888877 7899999999999865321
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHc-------CCCccccccCCCCeEEcCCCc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNN-------DCKLVHGNVCLSSVVVTQTLD 167 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~-------~~~ivH~dLkp~NI~v~~~g~ 167 (778)
...+|+||||+ ++|.+++..... ....+..++.||+.||.|||. ..+++||||||+||+++.+|.
T Consensus 112 --~~~~~lv~e~~~~g~L~~~l~~~~~----~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~ 185 (342)
T 1b6c_B 112 --WTQLWLVSDYHEHGSLFDYLNRYTV----TVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT 185 (342)
T ss_dssp --CCCEEEEECCCTTCBHHHHHHHCCB----CHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSC
T ss_pred --cceeEEEEeecCCCcHHHHHhccCc----cHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCC
Confidence 23799999999 489999987542 334456679999999999992 279999999999999999999
Q ss_pred EEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhC----------
Q 004025 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG---------- 237 (778)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg---------- 237 (778)
+||+|||++.......... ........++..|+|||++.+........++.++|+|||||++|||++|
T Consensus 186 ~kL~Dfg~~~~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~ 263 (342)
T 1b6c_B 186 CCIADLGLAVRHDSATDTI--DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDY 263 (342)
T ss_dssp EEECCCTTCEEEETTTTEE--EECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCC
T ss_pred EEEEECCCceecccccccc--ccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccccc
Confidence 9999999998765432110 0011122345589999998764211000122579999999999999998
Q ss_pred CCCCChh--------hhh-------ccCCCC---------cchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 238 MRLSKTE--------ELR-------NTASIP---------KSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 238 ~~p~~~~--------~l~-------~~~~iP---------~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
..||... .+. ....+| ..+.+++.+||..||.+||++.+++++-
T Consensus 264 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 331 (342)
T 1b6c_B 264 QLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTL 331 (342)
T ss_dssp CCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHH
T ss_pred ccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHH
Confidence 5555321 110 012333 2477889999999999999999998864
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-31 Score=313.29 Aligned_cols=244 Identities=15% Similarity=0.173 Sum_probs=187.0
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.||.|+ | +||+|+++.+|+.|+||++... ......+.+.+|+++|+.|+||||++++++++.... ..
T Consensus 14 grY~i~~~LG~G~fG--~Vyla~~~~tg~~VAVKvi~~~-~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~--~~ 88 (676)
T 3qa8_A 14 GPWEMKERLGTGGFG--YVLRWIHQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQK--LA 88 (676)
T ss_dssp ---CCCCCCCBCSSS--BCCCCCCTTTTCCEEECCCCSC-CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCC--CC
T ss_pred CCeEEEEEEeeCCCe--EEEEEEECCCCcEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCceeeeeccccc--cc
Confidence 5799999999998 8 8999999999999999998764 334456778999999999999999999998764110 00
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCc---EEEEe
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD---WKLHA 172 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~---~KL~d 172 (778)
.....||||||| ++|.+++.............+..++.||+.||.|||+ .+++||||||+||+++.+|. +||+|
T Consensus 89 ~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs-~gIVHrDLKP~NILl~~~g~~~~vKL~D 167 (676)
T 3qa8_A 89 PNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE-NRIIHRDLKPENIVLQPGPQRLIHKIID 167 (676)
T ss_dssp TTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHH-TTBCCCCCCSTTEEEECCSSSCEEEECS
T ss_pred CCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH-CCCccCCCCHHHeEeecCCCceeEEEcc
Confidence 134789999999 4799999875432222333456679999999999996 89999999999999997776 99999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-------
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE------- 245 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~------- 245 (778)
||++........ .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||....
T Consensus 168 FG~a~~~~~~~~-------~~~~~gt~~Y~APE~l~~------~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~ 234 (676)
T 3qa8_A 168 LGYAKELDQGEL-------CTEFVGTLQYLAPELLEQ------KKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHG 234 (676)
T ss_dssp CCCCCBTTSCCC-------CCCCCSCCTTCSSCSSCC------SCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSST
T ss_pred cccccccccccc-------cccccCCcccCChHHhcc------CCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhh
Confidence 999987754321 112345669999999876 367789999999999999999998874310
Q ss_pred ---------------hhc------c--------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 246 ---------------LRN------T--------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 246 ---------------l~~------~--------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
... . ..+|..+.+++.+||..||.+||++.++++|+
T Consensus 235 ~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp 299 (676)
T 3qa8_A 235 KVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVG 299 (676)
T ss_dssp TCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCT
T ss_pred hhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCH
Confidence 000 0 01334578889999999999999999999997
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-31 Score=307.95 Aligned_cols=236 Identities=18% Similarity=0.167 Sum_probs=185.3
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
....|++.++||.|+ | +||+|+++. +..|+||++...... .+.+.+|+++|+.|+||||+++++++..+
T Consensus 265 ~~~~~~~~~~lG~G~fg--~Vy~~~~~~-~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~~~~~~~~~---- 334 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFG--EVWMGTWNG-TTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSEE---- 334 (535)
T ss_dssp CGGGEEEEEEEEECSSE--EEEEEEETT-TEEEEEEEECTTSSC---HHHHHHHHHHHHHCCCTTBCCEEEEECSS----
T ss_pred chhhhhhheecccCCCe--EEEEEEECC-CceEEEEEeCCCCCC---HHHHHHHHHHHHhCCCCCEeeEEEEEeec----
Confidence 344689999999998 8 999999874 567999999864322 35688999999999999999999988642
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
.+||||||+ ++|.++|+...... .....+..++.||+.||.|||+ .+|+||||||+||+|+.++.+||+||
T Consensus 335 -----~~~lv~e~~~~gsL~~~l~~~~~~~-l~~~~~~~i~~qi~~~L~~LH~-~~ivHrDlkp~NIll~~~~~~kl~DF 407 (535)
T 2h8h_A 335 -----PIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER-MNYVHRDLRAANILVGENLVCKVADF 407 (535)
T ss_dssp -----SCEEEECCCTTEEHHHHHSHHHHTT-CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEECGGGCEEECCT
T ss_pred -----cceEeeehhcCCcHHHHHhhcCCCC-CCHHHHHHHHHHHHHHHHHHHh-CCeeCCCCCHhhEEEcCCCcEEEccc
Confidence 589999999 47999997532111 2234456679999999999996 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL------ 246 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l------ 246 (778)
|+++.+...... ......++..|+|||++.+ ..++.++|+|||||+||||++ |..||.....
T Consensus 408 G~a~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~------~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~ 476 (535)
T 2h8h_A 408 GLARLIEDNEYT-----ARQGAKFPIKWTAPEAALY------GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 476 (535)
T ss_dssp TSTTTCCCHHHH-----TTCSTTSCGGGSCHHHHHH------CCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHH
T ss_pred ccceecCCCcee-----cccCCcCcccccCHHHhcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 999876532100 0111123347999999876 357789999999999999999 7888753211
Q ss_pred -hc------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 247 -RN------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 247 -~~------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
.. ...+|..+.+++.+||..||.+||++.++++.
T Consensus 477 i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~ 517 (535)
T 2h8h_A 477 VERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAF 517 (535)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 11 13567789999999999999999999998865
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-30 Score=275.68 Aligned_cols=209 Identities=16% Similarity=0.074 Sum_probs=172.8
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
+...+|++.+.||.|+ | +||+|+++.+|+.|+||++...... +...+.+.+|++.++.++||||++++++++.+
T Consensus 28 ~~~~~y~i~~~lg~G~~g--~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~-- 103 (286)
T 3uqc_A 28 IANGRYRLLIFHGGVPPL--QFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTR-- 103 (286)
T ss_dssp ETTTTEEEEEEEEBSTTC--EEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEET--
T ss_pred EecCcEEEEEEEcccCCe--EEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEEC--
Confidence 3456799999999998 8 9999999999999999999875443 34567789999999999999999999999874
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
..+||||||| ++|.++++... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+
T Consensus 104 ------~~~~lv~e~~~g~~L~~~l~~~~-----~~~~~~~i~~ql~~aL~~lH~-~givH~Dikp~NIll~~~g~~kl~ 171 (286)
T 3uqc_A 104 ------AGGLVVAEWIRGGSLQEVADTSP-----SPVGAIRAMQSLAAAADAAHR-AGVALSIDHPSRVRVSIDGDVVLA 171 (286)
T ss_dssp ------TEEEEEEECCCEEEHHHHHTTCC-----CHHHHHHHHHHHHHHHHHHHH-TTCCCCCCSGGGEEEETTSCEEEC
T ss_pred ------CcEEEEEEecCCCCHHHHHhcCC-----ChHHHHHHHHHHHHHHHHHHH-CCCccCCCCcccEEEcCCCCEEEE
Confidence 3899999999 47999985421 223355669999999999996 899999999999999999999997
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh----
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---- 247 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~---- 247 (778)
++++ ++| ++.++|+|||||++|||++|..||......
T Consensus 172 ~~~~--------------------------~~~-------------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~ 212 (286)
T 3uqc_A 172 YPAT--------------------------MPD-------------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLA 212 (286)
T ss_dssp SCCC--------------------------CTT-------------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSE
T ss_pred eccc--------------------------cCC-------------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhH
Confidence 4332 221 345899999999999999999888643211
Q ss_pred ---------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 ---------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 ---------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+|..+.+++.+||..||..| ++.++++.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~ 259 (286)
T 3uqc_A 213 PAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNL 259 (286)
T ss_dssp ECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHH
T ss_pred HHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHH
Confidence 113578889999999999999999 99998865
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-30 Score=307.90 Aligned_cols=238 Identities=16% Similarity=0.173 Sum_probs=185.9
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCC---CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDG---SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g---~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
...|++++.||.|+ | +||+|+++.++ ..|+||.+... ..+...+.+.+|+.+|+.++||||+++++++..
T Consensus 389 ~~~y~i~~~LG~G~fG--~Vy~a~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~--- 462 (656)
T 2j0j_A 389 RERIELGRCIGEGQFG--DVHQGIYMSPENPAMAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVITE--- 462 (656)
T ss_dssp GGGEEEEEEEECCSSC--CEEEEEECCSSSCCEEEEEEECSST-TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS---
T ss_pred cccEEEeeEEeeCCCE--EEEEEEEecCCCccEEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec---
Confidence 34689999999998 8 89999987554 46999988653 233456778999999999999999999998853
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
..+||||||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+
T Consensus 463 ------~~~~lv~E~~~~g~L~~~l~~~~~~--l~~~~~~~i~~qi~~aL~~LH~-~givHrDikp~NILl~~~~~vkL~ 533 (656)
T 2j0j_A 463 ------NPVWIIMELCTLGELRSFLQVRKFS--LDLASLILYAYQLSTALAYLES-KRFVHRDIAARNVLVSSNDCVKLG 533 (656)
T ss_dssp ------SSCEEEEECCTTCBHHHHHHHTTTT--CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEEEETTEEEEC
T ss_pred ------CceEEEEEcCCCCcHHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHh-CCccccccchHhEEEeCCCCEEEE
Confidence 2589999999 5899999865422 2234455669999999999996 899999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh----
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL---- 246 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l---- 246 (778)
|||++........ .......++..|+|||++.+ ..++.++|+|||||++|||++ |..||.....
T Consensus 534 DFG~a~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~------~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~ 602 (656)
T 2j0j_A 534 DFGLSRYMEDSTY-----YKASKGKLPIKWMAPESINF------RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 602 (656)
T ss_dssp CCCCCCSCCC---------------CCGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH
T ss_pred ecCCCeecCCCcc-----eeccCCCCCcceeCHHHhcC------CCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHH
Confidence 9999987754211 11111223347999999875 357789999999999999997 8888754211
Q ss_pred ---------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 ---------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ---------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.....+|..+.+++.+||..||.+||++.++++.-
T Consensus 603 ~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L 646 (656)
T 2j0j_A 603 GRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 646 (656)
T ss_dssp HHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHcCCCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 11245677899999999999999999999998653
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-30 Score=293.25 Aligned_cols=246 Identities=15% Similarity=0.126 Sum_probs=178.5
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCC-CCe---------eeEeee
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRH-PNI---------LAFLHS 87 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrH-PnI---------lk~~d~ 87 (778)
.|.+++.||.|+ | +||+|+++.+|+.||||++...... ....+.+++|+.+++.|+| +|+ +..++.
T Consensus 79 ~~~~~~~LG~G~fG--~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 79 TLVRGTVLGQEDPY--AYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp EEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred eEEEecccccCCCE--EEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 488899999998 8 9999999999999999998843222 2335678999999999987 221 111111
Q ss_pred ------------eEecccccCCcccEEEEEecCC-cChHHHHHHhC---cCCC-cchHHHHHHHHHHHHHHHHHHcCCCc
Q 004025 88 ------------TEVENIDATSTKITIYIVTEPV-MPLSEKIKELG---LEGS-QRDEYYAWGLNQIAKAVSFLNNDCKL 150 (778)
Q Consensus 88 ------------~e~e~~~g~~~~~~lyIVtE~v-~~L~~~L~~~~---~~~~-~~~~~i~~gl~QI~~aL~fLH~~~~i 150 (778)
+.... ......+|++|+++ ++|.++++... .... .....+.+++.||+.||.|||+ .+|
T Consensus 157 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDER---DMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH-YGL 232 (413)
T ss_dssp EECCC------------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH-TTE
T ss_pred cccCCCCccccccCCCc---cccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh-CCc
Confidence 11110 00012478888887 57888875331 1111 1123345557999999999996 899
Q ss_pred cccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCcccccccc---cc-ccCCCCCcchhHH
Q 004025 151 VHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDW---TA-VRKSPPWSIDSWG 226 (778)
Q Consensus 151 vH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~---~~-~~~~~~~~~DiwS 226 (778)
+||||||+||+|+.+|.+||+|||+++..... .....+ ..|+|||++.+.. .. ....++.++|+||
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~---------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwS 302 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS---------AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWT 302 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEE---------ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCc---------cccCCC-CceeCchhhhccccccccccCcCCCchhhHHH
Confidence 99999999999999999999999998865432 111233 7999999984210 00 1134667999999
Q ss_pred HHHHHHHHHhCCCCCChhhh--------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 227 LGCLIYELFSGMRLSKTEEL--------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 227 LG~liyel~tg~~p~~~~~l--------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
|||++|||++|..||..... .....+|..+.+++.+||..||.+||++.++++|+
T Consensus 303 lGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~ 365 (413)
T 3dzo_A 303 LGLAIYWIWCADLPNTDDAALGGSEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETP 365 (413)
T ss_dssp HHHHHHHHHHSSCCCCTTGGGSCSGGGGSSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSH
T ss_pred HHHHHHHHHHCCCCCCCcchhhhHHHHHhhcccCCHHHHHHHHHHccCChhhCcCHHHHHhCH
Confidence 99999999999999865432 22357899999999999999999999999999997
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-29 Score=301.59 Aligned_cols=234 Identities=17% Similarity=0.185 Sum_probs=182.4
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECC-CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKD-DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~-~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
..+|++.+.||.|+ | +||+|+++. +|+.|+||++.... .......+.+|+++|+.|+||||++++++++.....+
T Consensus 79 ~~~y~i~~~lg~G~~g--~Vy~a~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 155 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLG--WIYLALDRNVNGRPVVLKGLVHSG-DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHG 155 (681)
T ss_dssp TTTEEEEEEEEEETTE--EEEEEEEGGGTTEEEEEEESCSSC-CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTS
T ss_pred CCceEEEEEEeeCCCe--EEEEEEEcCCCCcEEEEEEeCccC-CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCC
Confidence 35799999999998 8 899999976 78999999987542 3345567889999999999999999999998754211
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
...+||||||| ++|.+++.. . .....+..++.||+.||.|||+ .+|+||||||+||+++.+ .+||+||
T Consensus 156 ---~~~~~lv~E~~~g~~L~~~~~~-~----l~~~~~~~~~~qi~~aL~~lH~-~giiHrDlkp~NIll~~~-~~kl~DF 225 (681)
T 2pzi_A 156 ---DPVGYIVMEYVGGQSLKRSKGQ-K----LPVAEAIAYLLEILPALSYLHS-IGLVYNDLKPENIMLTEE-QLKLIDL 225 (681)
T ss_dssp ---CEEEEEEEECCCCEECC----C-C----CCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECSS-CEEECCC
T ss_pred ---CceeEEEEEeCCCCcHHHHHhC-C----CCHHHHHHHHHHHHHHHHHHHH-CCCeecccChHHeEEeCC-cEEEEec
Confidence 22479999999 468776654 1 2344466679999999999996 899999999999999875 8999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhcc----
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT---- 249 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~~---- 249 (778)
|++...... ....++..|+|||++.++ ++.++|+|||||++|+|++|.+++.......+
T Consensus 226 G~a~~~~~~----------~~~~gt~~y~aPE~~~~~-------~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~~~~ 288 (681)
T 2pzi_A 226 GAVSRINSF----------GYLYGTPGFQAPEIVRTG-------PTVATDIYTVGRTLAALTLDLPTRNGRYVDGLPEDD 288 (681)
T ss_dssp TTCEETTCC----------SCCCCCTTTSCTTHHHHC-------SCHHHHHHHHHHHHHHHHSCCCEETTEECSSCCTTC
T ss_pred ccchhcccC----------CccCCCccccCHHHHcCC-------CCCceehhhhHHHHHHHHhCCCCCcccccccccccc
Confidence 999877542 112355689999998753 36799999999999999999877654322211
Q ss_pred --CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 250 --ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 250 --~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
..++..+..++.+||..||.+||+..+.+.+.
T Consensus 289 ~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~ 322 (681)
T 2pzi_A 289 PVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQ 322 (681)
T ss_dssp HHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHH
T ss_pred cccccCHHHHHHHhhhccCChhhCCCHHHHHHHH
Confidence 12345688899999999999999888777765
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=99.95 E-value=4.4e-30 Score=279.21 Aligned_cols=231 Identities=12% Similarity=0.069 Sum_probs=170.6
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC------chhHHHHHHHHHHHHhcCC---------CCCee
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA------QDGHLAAARNGVKRLRTVR---------HPNIL 82 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~------~~~~~~~~~~ev~~Lk~Lr---------HPnIl 82 (778)
.+|++.+.||.|+ | +||+|++ +|+.||||++..... .....+.+.+|+++|+.|+ ||||+
T Consensus 20 ~~y~~~~~lG~G~~g--~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv 95 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFG--EVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFI 95 (336)
T ss_dssp HHHHTCEEEEEETTE--EEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBC
T ss_pred ccchheeeecccCce--EEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchh
Confidence 4699999999998 8 9999998 689999999987532 1233467888999888886 66666
Q ss_pred eEeeee-----------------Eeccccc-----CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHH
Q 004025 83 AFLHST-----------------EVENIDA-----TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIA 138 (778)
Q Consensus 83 k~~d~~-----------------e~e~~~g-----~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~ 138 (778)
++++.+ ++..... ......+||||||| +++.+.+.+.. .....++.+++||+
T Consensus 96 ~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~----~~~~~~~~i~~qi~ 171 (336)
T 2vuw_A 96 GLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKL----SSLATAKSILHQLT 171 (336)
T ss_dssp CEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTC----CCHHHHHHHHHHHH
T ss_pred hhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcC----CCHHHHHHHHHHHH
Confidence 665554 3210000 00024899999998 44554443321 23455777899999
Q ss_pred HHHHHHH-cCCCccccccCCCCeEEcCCC--------------------cEEEEecccccccCCCCCCCCCCcccccccc
Q 004025 139 KAVSFLN-NDCKLVHGNVCLSSVVVTQTL--------------------DWKLHAFDVLSEFDGNNEAANGPMLQYAWLV 197 (778)
Q Consensus 139 ~aL~fLH-~~~~ivH~dLkp~NI~v~~~g--------------------~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~ 197 (778)
.||.||| + .+|+||||||+||+++.+| .+||+|||+++..... ...+
T Consensus 172 ~aL~~lH~~-~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-----------~~~g 239 (336)
T 2vuw_A 172 ASLAVAEAS-LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-----------IVVF 239 (336)
T ss_dssp HHHHHHHHH-HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-----------EEEC
T ss_pred HHHHHHHHh-CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-----------cEEE
Confidence 9999999 6 8999999999999999887 8999999999876541 1245
Q ss_pred CCCCCCccccccccccccCCCCCcchhHHHHHH-HHHHHhCCCCCChhh----h----h-c--c---------CCCCcch
Q 004025 198 GAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCL-IYELFSGMRLSKTEE----L----R-N--T---------ASIPKSL 256 (778)
Q Consensus 198 ~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~l-iyel~tg~~p~~~~~----l----~-~--~---------~~iP~~L 256 (778)
+..|+|||++.+. . +.++||||||+. .++++.|..||.... + . . . ..+++.+
T Consensus 240 t~~y~aPE~~~g~------~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 312 (336)
T 2vuw_A 240 CDVSMDEDLFTGD------G-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKI 312 (336)
T ss_dssp CCCTTCSGGGCCC------S-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHH
T ss_pred eecccChhhhcCC------C-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHH
Confidence 6689999999863 2 679999998776 788888988875421 1 0 0 0 1245567
Q ss_pred HHHHHHHhccCCCCCCChHHHH-hcc
Q 004025 257 LPDYQRLLSSMPSRRLNSSKLI-ENS 281 (778)
Q Consensus 257 ~~~i~~lL~~dP~~Rps~~~lL-~~~ 281 (778)
.+++++||..| |+.++| +|+
T Consensus 313 ~dli~~~L~~d-----sa~e~l~~Hp 333 (336)
T 2vuw_A 313 QEFHRTMLNFS-----SATDLLCQHS 333 (336)
T ss_dssp HHHHHHGGGSS-----SHHHHHHHCG
T ss_pred HHHHHHHhccC-----CHHHHHhcCC
Confidence 88899999976 999999 998
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-25 Score=262.40 Aligned_cols=176 Identities=14% Similarity=0.016 Sum_probs=124.7
Q ss_pred EEEEeEECCCCCcEEEEEEeCCCC--------chhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecccccCCcccEEEEE
Q 004025 35 SHFQGTSKDDGSPVSIFSISGTNA--------QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDATSTKITIYIV 105 (778)
Q Consensus 35 ~Vy~g~~k~~g~~VaIK~~~~~~~--------~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~g~~~~~~lyIV 105 (778)
.++.+++...|+.|+||++.+... .+...+.+++|+++|+++ .||||++++++++++ ..+|||
T Consensus 249 ~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~--------~~~yLV 320 (569)
T 4azs_A 249 AHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENA--------QSGWLV 320 (569)
T ss_dssp ---CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECS--------SEEEEE
T ss_pred cccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEEC--------CEEEEE
Confidence 455666677899999999986521 124456799999999999 699999999999975 389999
Q ss_pred ecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCCCC
Q 004025 106 TEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNN 183 (778)
Q Consensus 106 tE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~ 183 (778)
|||| ++|.++|+..+... ... ++.||+.||.|||+ .|||||||||+|||++.+|.+||+|||+++......
T Consensus 321 MEyv~G~~L~d~i~~~~~l~---~~~---I~~QIl~AL~ylH~-~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~ 393 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGEEID---REK---ILGSLLRSLAALEK-QGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC 393 (569)
T ss_dssp EECCCSEEHHHHHHTTCCCC---HHH---HHHHHHHHHHHHHH-TTCEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred EecCCCCcHHHHHHhCCCCC---HHH---HHHHHHHHHHHHHH-CCceeccCchHhEEECCCCCEEEeecccCeeCCCCC
Confidence 9999 47999998765432 222 38999999999996 999999999999999999999999999998775432
Q ss_pred CCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCC
Q 004025 184 EAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM 238 (778)
Q Consensus 184 ~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~ 238 (778)
. .....+++..|++||++.+. +..++|+|++|+++|++..+.
T Consensus 394 ~------~~~t~vGTp~YmAPE~l~g~-------~~~~~d~~s~g~~~~~l~~~~ 435 (569)
T 4azs_A 394 S------WPTNLVQSFFVFVNELFAEN-------KSWNGFWRSAPVHPFNLPQPW 435 (569)
T ss_dssp C------CSHHHHHHHHHHHHHHC------------------------CCCCTTH
T ss_pred c------cccCceechhhccHHHhCCC-------CCCcccccccccchhhhcccc
Confidence 1 12233556699999998763 456899999999988876653
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.3e-19 Score=209.98 Aligned_cols=184 Identities=12% Similarity=0.006 Sum_probs=129.9
Q ss_pred ccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch------hHHHHHHHHHHHHhcCCCCCee--eEeeeeEecccc
Q 004025 24 GDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD------GHLAAARNGVKRLRTVRHPNIL--AFLHSTEVENID 94 (778)
Q Consensus 24 ~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~------~~~~~~~~ev~~Lk~LrHPnIl--k~~d~~e~e~~~ 94 (778)
.+.||.|+ | +||+|+. .+..+++|....+.... ...+.+.+|+++|++|+||||+ .+++. .+
T Consensus 341 ~~~LG~G~fg--~Vy~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~--~~--- 411 (540)
T 3en9_A 341 EHLIGKGAEA--DIKRDSY--LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDV--DL--- 411 (540)
T ss_dssp -------CCE--EEEEEEC--SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEE--ET---
T ss_pred CCEEeeCCCE--EEEEEEE--CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEE--eC---
Confidence 45788887 7 9999954 57899999876543321 2245689999999999999999 55555 22
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
...||||||| ++|.++++. ...++.||+.||.|||+ .+|+||||||+||+++. .+||+|
T Consensus 412 -----~~~~lVmE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~-~gIiHrDiKp~NILl~~--~~kL~D 472 (540)
T 3en9_A 412 -----DNKRIMMSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHK-NDVIHNDLTTSNFIFDK--DLYIID 472 (540)
T ss_dssp -----TTTEEEEECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHH-TTEECTTCCTTSEEESS--SEEECC
T ss_pred -----CccEEEEECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHH-CcCccCCCCHHHEEECC--eEEEEE
Confidence 2569999999 579988765 12338999999999996 89999999999999998 999999
Q ss_pred cccccccCCCCCCCCC-CccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCC
Q 004025 173 FDVLSEFDGNNEAANG-PMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMR 239 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~-~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~ 239 (778)
||+++........... ........++..|+|||++.... ..|...+|+|+..+-..+-+.++.
T Consensus 473 FGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~----~~Y~~~~d~ws~vl~~l~~v~~r~ 536 (540)
T 3en9_A 473 FGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFL----EGYKSVYDRWEIILELMKDVERRA 536 (540)
T ss_dssp CTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHH----HHHHHHCTTHHHHHHHHHHHHTCS
T ss_pred CccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHH----HHHHHHHhHHHHHHHHHHHHHhcc
Confidence 9999987542110000 00112334566899999987522 234557899998887777665543
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.5e-18 Score=184.47 Aligned_cols=144 Identities=17% Similarity=0.099 Sum_probs=110.7
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch----------------hHHHHHHHHHHHHhcCCCCCee
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD----------------GHLAAARNGVKRLRTVRHPNIL 82 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~----------------~~~~~~~~ev~~Lk~LrHPnIl 82 (778)
-|.+++.||.|. | .||.|++ .+|+.|+||++....... .....+.+|+.+|+.|+| +
T Consensus 91 ~~~~~~~iG~G~~g--~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~---~ 164 (282)
T 1zar_A 91 VDAIGKLMGEGKES--AVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG---L 164 (282)
T ss_dssp CSEEEEEEEECSSE--EEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT---S
T ss_pred EEEecCEeccCCCc--eEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC---C
Confidence 366669999998 8 9999999 789999999996432110 135568899999999994 5
Q ss_pred eEeeeeEecccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCe
Q 004025 83 AFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSV 160 (778)
Q Consensus 83 k~~d~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI 160 (778)
++++++..+ ..|+||||| ++|.+ +.. .. ...++.||+.||.|||+ .+++||||||+||
T Consensus 165 ~v~~~~~~~---------~~~lvmE~~~g~~L~~-l~~-----~~----~~~i~~qi~~~l~~lH~-~giiHrDlkp~NI 224 (282)
T 1zar_A 165 AVPKVYAWE---------GNAVLMELIDAKELYR-VRV-----EN----PDEVLDMILEEVAKFYH-RGIVHGDLSQYNV 224 (282)
T ss_dssp SSCCEEEEE---------TTEEEEECCCCEEGGG-CCC-----SC----HHHHHHHHHHHHHHHHH-TTEECSCCSTTSE
T ss_pred CcCeEEecc---------ceEEEEEecCCCcHHH-cch-----hh----HHHHHHHHHHHHHHHHH-CCCEeCCCCHHHE
Confidence 555555432 469999999 36876 311 11 22359999999999996 9999999999999
Q ss_pred EEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCcccccc
Q 004025 161 VVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKS 209 (778)
Q Consensus 161 ~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~ 209 (778)
+++ +|.+||+|||++.... .|++||++..
T Consensus 225 Ll~-~~~vkl~DFG~a~~~~-------------------~~~a~e~l~r 253 (282)
T 1zar_A 225 LVS-EEGIWIIDFPQSVEVG-------------------EEGWREILER 253 (282)
T ss_dssp EEE-TTEEEECCCTTCEETT-------------------STTHHHHHHH
T ss_pred EEE-CCcEEEEECCCCeECC-------------------CCCHHHHHHH
Confidence 999 9999999999987542 4578888764
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=1.1e-15 Score=160.07 Aligned_cols=139 Identities=12% Similarity=0.117 Sum_probs=103.8
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCc--EEEEEEeCCCCc----------------------hhHHHHHHHHHHHHh
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSP--VSIFSISGTNAQ----------------------DGHLAAARNGVKRLR 74 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~--VaIK~~~~~~~~----------------------~~~~~~~~~ev~~Lk 74 (778)
-|++++.||.|+ | .||+|+++.+|+. ||||++...... ......+.+|++.|+
T Consensus 48 ~~~i~~~ig~G~~g--~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 125 (258)
T 1zth_A 48 ITAMGGVISTGKEA--NVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLE 125 (258)
T ss_dssp EEEEEEEEEECSSE--EEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceE--EEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHH
Confidence 488999999998 8 9999999778999 999998643111 011236889999999
Q ss_pred cCCCCCe--eeEeeeeEecccccCCcccEEEEEecCCc-------ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHH
Q 004025 75 TVRHPNI--LAFLHSTEVENIDATSTKITIYIVTEPVM-------PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLN 145 (778)
Q Consensus 75 ~LrHPnI--lk~~d~~e~e~~~g~~~~~~lyIVtE~v~-------~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH 145 (778)
.|+|++| ..+++. . ..|||||||+ .|.+++.... ...+..++.||+.+|.|||
T Consensus 126 ~l~~~~i~~p~~~~~---~---------~~~lVmE~~g~~g~~~~~L~~~~~~~~------~~~~~~i~~qi~~~l~~lH 187 (258)
T 1zth_A 126 RAKEAGVSVPQPYTY---M---------KNVLLMEFIGEDELPAPTLVELGRELK------ELDVEGIFNDVVENVKRLY 187 (258)
T ss_dssp HHHHTTCCCCCEEEE---E---------TTEEEEECCEETTEECCBHHHHGGGGG------GSCHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCCeEEEc---C---------CCEEEEEecCCCCCccccHHHHhhccC------hHHHHHHHHHHHHHHHHHH
Confidence 9998864 333332 1 3589999994 4655533211 1113445899999999999
Q ss_pred cCCCccccccCCCCeEEcCCCcEEEEecccccccC
Q 004025 146 NDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (778)
Q Consensus 146 ~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~ 180 (778)
..++++||||||+||+++. .+||+|||++....
T Consensus 188 ~~~givHrDlkp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 188 QEAELVHADLSEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp HTSCEECSSCSTTSEEESS--SEEECCCTTCEETT
T ss_pred HHCCEEeCCCCHHHEEEcC--cEEEEECcccccCC
Confidence 3389999999999999998 99999999997664
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.33 E-value=8e-13 Score=145.56 Aligned_cols=138 Identities=12% Similarity=0.101 Sum_probs=97.0
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC--------c----h----h----HHHHHHHHHHHHhcCCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA--------Q----D----G----HLAAARNGVKRLRTVRH 78 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~--------~----~----~----~~~~~~~ev~~Lk~LrH 78 (778)
=|.|+++||.|. | .||.|.+. +|+.||||++..... . . . ..-.+.+|+..|.+|.+
T Consensus 96 iY~I~~~IG~Gk~a--~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~ 172 (397)
T 4gyi_A 96 VYSVGSRIGVGKES--DIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYE 172 (397)
T ss_dssp CSEEEEEEEECSSE--EEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCEeeeCCce--EEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHh
Confidence 399999999998 8 99999985 699999999863210 0 0 0 01124568888888866
Q ss_pred CCeeeEeeeeEecccccCCcccEEEEEecCCc--ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccC
Q 004025 79 PNILAFLHSTEVENIDATSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156 (778)
Q Consensus 79 PnIlk~~d~~e~e~~~g~~~~~~lyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLk 156 (778)
.++ .+...+... ..+||||||. +|.++.. .... ..++.||+.+|.+||. ++|||||||
T Consensus 173 ~gv-~vp~p~~~~---------~~~LVME~i~G~~L~~l~~------~~~~---~~l~~qll~~l~~lH~-~gIVHrDLK 232 (397)
T 4gyi_A 173 EGF-PVPEPIAQS---------RHTIVMSLVDALPMRQVSS------VPDP---ASLYADLIALILRLAK-HGLIHGDFN 232 (397)
T ss_dssp TTC-SCCCEEEEE---------TTEEEEECCSCEEGGGCCC------CSCH---HHHHHHHHHHHHHHHH-TTEECSCCS
T ss_pred cCC-CCCeeeecc---------CceEEEEecCCccHhhhcc------cHHH---HHHHHHHHHHHHHHHH-CCCcCCCCC
Confidence 554 233333221 2379999993 4543211 1111 2337899999999996 899999999
Q ss_pred CCCeEEcCCCc----------EEEEecccccccC
Q 004025 157 LSSVVVTQTLD----------WKLHAFDVLSEFD 180 (778)
Q Consensus 157 p~NI~v~~~g~----------~KL~dFgla~~~~ 180 (778)
|.||+++++|+ +.|+||+-+....
T Consensus 233 p~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 233 EFNILIREEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp TTSEEEEEEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred HHHEEEeCCCCcccccccccceEEEEeCCcccCC
Confidence 99999998874 7899999776543
|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A | Back alignment and structure |
|---|
Probab=99.22 E-value=9.2e-11 Score=135.30 Aligned_cols=227 Identities=14% Similarity=0.204 Sum_probs=191.7
Q ss_pred CChhhHhHhhhhchhhhcCCChhhhhhchHHHHHHHHhhCCC--CchhhHHHHHhccCCChhhhhhhhHHHHHHhhcCCh
Q 004025 308 KDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSA--AAPALTALLKMGSWLSTEEFSVKVLPTIVKLFASND 385 (778)
Q Consensus 308 k~~~EK~~F~~~L~~~l~~fp~~~~~~kILP~Ll~~~~~~~~--~~~~L~~llki~~~l~~eef~~~i~P~i~~lF~~~D 385 (778)
.++.-|..-.+.|..+.+.++.......++|.|...+..... ...++..+-.++..++.+.+...++|.+..++.+++
T Consensus 176 ~~~~VR~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~l~~~~~d~~ 255 (588)
T 1b3u_A 176 DTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKS 255 (588)
T ss_dssp SCHHHHHHHHHHHHHHHHTSCHHHHHHTHHHHHHHHHTCSCHHHHTTHHHHHHHHHHHSCHHHHHHHTHHHHHHHHTCSS
T ss_pred CCHHHHHHHHHHHHHHHHHhcHHhHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHccCCC
Confidence 455567777777888888888877778899999988865542 123455666788888888888999999999999999
Q ss_pred HHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChh----hHhHHHHHHHHhhccC
Q 004025 386 RAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQR----TISGSLLKYLSKLQVD 461 (778)
Q Consensus 386 r~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~----~l~~~LL~~laklq~D 461 (778)
+.||...++.|..+...++++.+.+.++|.+...+.|.++.||+.++.++..++..+... .....++|++.++..|
T Consensus 256 ~~vR~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~p~l~~~l~d 335 (588)
T 1b3u_A 256 WRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSD 335 (588)
T ss_dssp HHHHHHHHHTHHHHHHHHCHHHHHHTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHTSCTTTHHHHHHHTHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHhCcccchhHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHhChhhhhhHHHHHHHHHHHHHhcC
Confidence 999999999999999999888888899999999999999999999999999999988765 4567899999999999
Q ss_pred CCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhhheeee--c---------c--------------C
Q 004025 462 EEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL--S---------Y--------------L 516 (778)
Q Consensus 462 ~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~l~a--~---------~--------------~ 516 (778)
+.+.||..++.+|+.|++.++.+.....|+|.|. ..++|+....|.+++.+ . + +
T Consensus 336 ~~~~vR~~a~~~l~~l~~~~~~~~~~~~l~p~l~-~~l~d~~~~Vr~~a~~~l~~l~~~~~~~~~~~~~lp~l~~~~~d~ 414 (588)
T 1b3u_A 336 ANQHVKSALASVIMGLSPILGKDNTIEHLLPLFL-AQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDA 414 (588)
T ss_dssp SCHHHHHHHHTTGGGGHHHHCHHHHHHHTHHHHH-HHHTCSCHHHHHHHHTTCHHHHHHSCHHHHHHHHHHHHHHHHTCS
T ss_pred CCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHH-HHhCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999987665567899999 99999999999998877 1 0 5
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q 004025 517 NCDVRSKAFQAVDQFLQIV 535 (778)
Q Consensus 517 ~~~VR~~a~~~~~~~l~~l 535 (778)
+..||..+.+++..+.+.+
T Consensus 415 ~~~vr~~~~~~l~~l~~~~ 433 (588)
T 1b3u_A 415 KWRVRLAIIEYMPLLAGQL 433 (588)
T ss_dssp SHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHc
Confidence 6778888888887776554
|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A | Back alignment and structure |
|---|
Probab=99.19 E-value=1.1e-10 Score=134.54 Aligned_cols=200 Identities=17% Similarity=0.174 Sum_probs=137.1
Q ss_pred hhhchHHHHHHHHhhCC--CCchhhHHHHHhccCCChhhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhh
Q 004025 332 VLKKLLPLLASALEFGS--AAAPALTALLKMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVD 409 (778)
Q Consensus 332 ~~~kILP~Ll~~~~~~~--~~~~~L~~llki~~~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~ 409 (778)
....++|.|........ ....+...+-+++..++.+.+...++|.+..+..+.+..+|...+.-+..+..+++.. ..
T Consensus 84 ~~~~ll~~L~~l~~~~~~~vR~~a~~~L~~l~~~~~~~~~~~~l~~~l~~l~~~~~~~~R~~a~~~l~~~~~~~~~~-~~ 162 (588)
T 1b3u_A 84 YVHCLLPPLESLATVEETVVRDKAVESLRAISHEHSPSDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSA-VK 162 (588)
T ss_dssp GGGGGHHHHHHHTTSSCHHHHHHHHHHHHHHHTTSCHHHHHHTHHHHHHHHHTCSSHHHHHHHGGGHHHHTTTSCHH-HH
T ss_pred HHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcCHH-HH
Confidence 34556777665443322 1123344555666777776666677777777777777777777777777777777754 34
Q ss_pred hcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhh
Q 004025 410 EQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRV 489 (778)
Q Consensus 410 ~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~v 489 (778)
+.++|.+..++.|.++.||..+++++..++..+.......+++|.|.++..|+++.||..++.||++|+..++.+.....
T Consensus 163 ~~l~~~l~~l~~d~~~~VR~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~ 242 (588)
T 1b3u_A 163 AELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQEDLEAL 242 (588)
T ss_dssp HHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTSCHHHHHHTHHHHHHHHHTCSCHHHHTTHHHHHHHHHHHSCHHHHHHH
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhcHHhHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 56777777777777777777777777777777776666667777777777777777777777777777777776655666
Q ss_pred hHHHHHhhhhcCCCchhhhheeee-----c------c--------------CCHHHHHHHHHHHHHHHH
Q 004025 490 LINAFTVRALRDTFSPARGAAKIL-----S------Y--------------LNCDVRSKAFQAVDQFLQ 533 (778)
Q Consensus 490 L~~af~~~~lkD~f~~~R~A~l~a-----~------~--------------~~~~VR~~a~~~~~~~l~ 533 (778)
++|.+. +.+.|+.+..|.+++.+ . + .+..||..|..++..+..
T Consensus 243 ~~~~l~-~~~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~~~~ 310 (588)
T 1b3u_A 243 VMPTLR-QAAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCE 310 (588)
T ss_dssp THHHHH-HHHTCSSHHHHHHHHHTHHHHHHHHCHHHHHHTHHHHHHHHHTCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-HHccCCCHHHHHHHHHHHHHHHHHhCcccchhHHHHHHHHHhCCCcHHHHHHHHHHHHHHHH
Confidence 777777 77777777777777665 0 0 566777777777766654
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=8e-08 Score=99.64 Aligned_cols=137 Identities=9% Similarity=0.007 Sum_probs=96.9
Q ss_pred CceeccCCCCCCCceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~g~~~ 98 (778)
.|++....+.+++. .||++... +..+++|+........ ...+.+|++.|+.|. |..+.++++.....
T Consensus 15 ~~~~~~~~~g~s~~-~v~~~~~~--~~~~vlK~~~~~~~~~--~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~------- 82 (263)
T 3tm0_A 15 KYRCVKDTEGMSPA-KVYKLVGE--NENLYLKMTDSRYKGT--TYDVEREKDMMLWLEGKLPVPKVLHFERHD------- 82 (263)
T ss_dssp TSEEEECCSCCSSS-EEEEEECS--SCEEEEEEECGGGTTS--TTCHHHHHHHHHHHTTTSCCCCEEEEEEET-------
T ss_pred cceeEeeccCCCCC-eEEEEECC--CCcEEEEeCCcccCCC--HHHHHHHHHHHHHHhcCCCCCeEEEEEecC-------
Confidence 48888877766522 79988753 6899999987421111 124778999999885 66788888887753
Q ss_pred ccEEEEEecCCc--ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcC-----------------------------
Q 004025 99 KITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNND----------------------------- 147 (778)
Q Consensus 99 ~~~lyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~----------------------------- 147 (778)
...|+|||++. +|...+. .. .... ..+.+++.+|..||+-
T Consensus 83 -~~~~lv~e~i~G~~l~~~~~----~~-~~~~---~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (263)
T 3tm0_A 83 -GWSNLLMSEADGVLCSEEYE----DE-QSPE---KIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADV 153 (263)
T ss_dssp -TEEEEEEECCSSEEHHHHCC----TT-TCHH---HHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCC
T ss_pred -CceEEEEEecCCeehhhccC----Cc-ccHH---HHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccc
Confidence 37899999993 5665421 11 1111 2278899999999960
Q ss_pred -----------------------------CCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 148 -----------------------------CKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 148 -----------------------------~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
..++|||++|.||+++.++.+.|+||+.+.
T Consensus 154 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 154 DCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp SGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 348999999999999876566799998764
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=98.58 E-value=2.3e-07 Score=95.34 Aligned_cols=131 Identities=14% Similarity=0.107 Sum_probs=87.8
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCC--eeeEeeeeEecccccC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPN--ILAFLHSTEVENIDAT 96 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPn--Ilk~~d~~e~e~~~g~ 96 (778)
.|.+....+.|. + .||++.. .+|..++||+..... ...+.+|+..|+.|++.+ +.+++......
T Consensus 21 ~~~~~~~~~gg~~~--~v~~~~~-~~g~~~vlK~~~~~~-----~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~----- 87 (264)
T 1nd4_A 21 GYDWAQQTIGCSDA--AVFRLSA-QGRPVLFVKTDLSGA-----LNELQDEAARLSWLATTGVPCAAVLDVVTEA----- 87 (264)
T ss_dssp TCEEEECSCTTSSC--EEEEEEC-TTSCCEEEEEECSCT-----TSCHHHHHHHHHHHHTTTCCBCCEEEEEECS-----
T ss_pred CCceEecccCCCCc--eEEEEec-CCCCeEEEEeCCccc-----chhhhHHHHHHHHHHhCCCCCCeEEEeccCC-----
Confidence 366654433443 5 7999864 467889999976431 134678888888886544 45677766542
Q ss_pred CcccEEEEEecCCc--ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCC-------------------------
Q 004025 97 STKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCK------------------------- 149 (778)
Q Consensus 97 ~~~~~lyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~------------------------- 149 (778)
...|+||||+. +|. . .. .. .. ..+.+++..|..||. ..
T Consensus 88 ---~~~~~v~e~i~G~~l~--~---~~--~~-~~---~~~~~l~~~l~~lh~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (264)
T 1nd4_A 88 ---GRDWLLLGEVPGQDLL--S---SH--LA-PA---EKVSIMADAMRRLHT-LDPATCPFDHQAKHRIERARTRMEAGL 152 (264)
T ss_dssp ---SCEEEEEECCSSEETT--T---SC--CC-HH---HHHHHHHHHHHHHTT-SCGGGCCCBCCHHHHHHHHHHHHHTTC
T ss_pred ---CCCEEEEEecCCcccC--c---Cc--CC-Hh---HHHHHHHHHHHHHhC-CCCCCCCCchHHHHHHHHHHHHHhcCC
Confidence 26899999993 453 1 10 01 11 126677777777774 22
Q ss_pred ---------------------------------ccccccCCCCeEEcCCCcEEEEecccccc
Q 004025 150 ---------------------------------LVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (778)
Q Consensus 150 ---------------------------------ivH~dLkp~NI~v~~~g~~KL~dFgla~~ 178 (778)
++|||++|.||+++.++.++|+|||.+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 153 VDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp CCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred ccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 99999999999998776677999998653
|
| >2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.46 E-value=6.8e-07 Score=91.74 Aligned_cols=148 Identities=7% Similarity=0.181 Sum_probs=86.7
Q ss_pred hhhHHHHHHhhc-CChHHHHHHHHHhHHHHHhhcChhh--hhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhH
Q 004025 371 VKVLPTIVKLFA-SNDRAIRVALLQHIDQYGQSFSAQV--VDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTI 447 (778)
Q Consensus 371 ~~i~P~i~~lF~-~~Dr~iR~~LL~~l~~~~~~l~~~~--v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l 447 (778)
..+++.+.+++. +++..||...+.-+..++..+.+.. .-..|+|.++..+.|.++.||+.+..++..++..++
T Consensus 55 ~~i~~~L~~~l~kd~~~~V~~~a~~~l~~la~~l~~~~~~~~~~ilp~ll~~l~d~~~~vr~~a~~aL~~~~~~~~---- 130 (242)
T 2qk2_A 55 GALVSALKKVITKDSNVVLVAMAGKCLALLAKGLAKRFSNYASACVPSLLEKFKEKKPNVVTALREAIDAIYASTS---- 130 (242)
T ss_dssp HHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTSC----
T ss_pred HHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCC----
Confidence 455666666663 6666666666666666666665531 223366666666666666666666666666665443
Q ss_pred hHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccc----cchhhhHHHHHhhhhcCCCchhhhheeeeccCCHHHHHH
Q 004025 448 SGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEG----TRKRVLINAFTVRALRDTFSPARGAAKILSYLNCDVRSK 523 (778)
Q Consensus 448 ~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~----~~~~vL~~af~~~~lkD~f~~~R~A~l~a~~~~~~VR~~ 523 (778)
...+++.|.....|..+.||.+++-+|+.++...+++ ..-..++|.+. ..|.|+. +.||+.
T Consensus 131 ~~~ll~~l~~~l~~~~~~vr~~~l~~l~~~l~~~~~~~~~~~~l~~l~p~l~-~~l~D~~--------------~~VR~~ 195 (242)
T 2qk2_A 131 LEAQQESIVESLSNKNPSVKSETALFIARALTRTQPTALNKKLLKLLTTSLV-KTLNEPD--------------PTVRDS 195 (242)
T ss_dssp HHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCCGGGCCHHHHHHHHHHHH-HHHTSSC--------------HHHHHH
T ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHH-HHhcCCC--------------hHHHHH
Confidence 2456666655555556666666666666655444321 11224555555 5665555 667777
Q ss_pred HHHHHHHHHHHHHH
Q 004025 524 AFQAVDQFLQIVKQ 537 (778)
Q Consensus 524 a~~~~~~~l~~l~~ 537 (778)
|++++-.+...+..
T Consensus 196 A~~~l~~l~~~vg~ 209 (242)
T 2qk2_A 196 SAEALGTLIKLMGD 209 (242)
T ss_dssp HHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHcCH
Confidence 77777776666543
|
| >2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.42 E-value=1.4e-06 Score=89.34 Aligned_cols=180 Identities=16% Similarity=0.197 Sum_probs=133.9
Q ss_pred HhhhcccCChhhHhHhhhhchhhhcCCChh--hhhhchHHHHHHHHh-hCCCC--chhhHHHHHhccCCCh--hhhhhhh
Q 004025 301 FMEILNLKDSVEKDTFFRKLPNLAEQLPRQ--IVLKKLLPLLASALE-FGSAA--APALTALLKMGSWLST--EEFSVKV 373 (778)
Q Consensus 301 ~Le~l~~k~~~EK~~F~~~L~~~l~~fp~~--~~~~kILP~Ll~~~~-~~~~~--~~~L~~llki~~~l~~--eef~~~i 373 (778)
+++.+.-++-.+|..-+..|...++..|.- -...++++.|.+.+. ..+.. ..++..+-.++..+.. +.|...+
T Consensus 20 l~~~l~s~~w~~R~~a~~~L~~l~~~~~~~~~~~~~~i~~~L~~~l~kd~~~~V~~~a~~~l~~la~~l~~~~~~~~~~i 99 (242)
T 2qk2_A 20 FYDKLEEKKWTLRKESLEVLEKLLTDHPKLENGEYGALVSALKKVITKDSNVVLVAMAGKCLALLAKGLAKRFSNYASAC 99 (242)
T ss_dssp HHHHHTCSSHHHHHHHHHHHHHHHHHCSSBCCCCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHGGGGHHHHHHH
T ss_pred HHhhhccCCHHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 344455677778877777776666543321 112467888888884 44321 1223333333333332 4577789
Q ss_pred HHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChh----hHhH
Q 004025 374 LPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQR----TISG 449 (778)
Q Consensus 374 ~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~----~l~~ 449 (778)
+|.|+..|.++...||-.+..-|..++..++- +.++|.+..++.+.++.+|+.++..|..++...+.. ..-.
T Consensus 100 lp~ll~~l~d~~~~vr~~a~~aL~~~~~~~~~----~~ll~~l~~~l~~~~~~vr~~~l~~l~~~l~~~~~~~~~~~~l~ 175 (242)
T 2qk2_A 100 VPSLLEKFKEKKPNVVTALREAIDAIYASTSL----EAQQESIVESLSNKNPSVKSETALFIARALTRTQPTALNKKLLK 175 (242)
T ss_dssp HHHHHHGGGCCCHHHHHHHHHHHHHHHTTSCH----HHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCCGGGCCHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCH----HHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCCCccHHHHH
Confidence 99999999999999999999999999988763 468999999999999999999999999987655322 2235
Q ss_pred HHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccc
Q 004025 450 SLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEG 484 (778)
Q Consensus 450 ~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~ 484 (778)
.++|.|.++..|+.+.||..+..||+.|+..++.+
T Consensus 176 ~l~p~l~~~l~D~~~~VR~~A~~~l~~l~~~vg~~ 210 (242)
T 2qk2_A 176 LLTTSLVKTLNEPDPTVRDSSAEALGTLIKLMGDK 210 (242)
T ss_dssp HHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHhcCCChHHHHHHHHHHHHHHHHcCHH
Confidence 89999999999999999999999999999999864
|
| >1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A | Back alignment and structure |
|---|
Probab=98.32 E-value=1.6e-05 Score=88.23 Aligned_cols=227 Identities=12% Similarity=0.118 Sum_probs=157.1
Q ss_pred ChhhHhHhhhhchhhhcCC-Chhh--hhhchHHHHHHHHhhCCCCc----hhhHHHHHhccCC----ChhhhhhhhHHHH
Q 004025 309 DSVEKDTFFRKLPNLAEQL-PRQI--VLKKLLPLLASALEFGSAAA----PALTALLKMGSWL----STEEFSVKVLPTI 377 (778)
Q Consensus 309 ~~~EK~~F~~~L~~~l~~f-p~~~--~~~kILP~Ll~~~~~~~~~~----~~L~~llki~~~l----~~eef~~~i~P~i 377 (778)
+...|..-+.-|..+.+.+ +..+ ....++|.|+..+....... .++..+..+...+ ..+.|...+++.+
T Consensus 143 ~~~~r~~al~~l~~l~~~~~~~~~~~~~~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~l 222 (462)
T 1ibr_B 143 TEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVV 222 (462)
T ss_dssp CHHHHHHHHHHHHHHHHHSCGGGTGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHTTTTHHHHTSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhCCchhhHhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Confidence 4445554444444444433 2211 12347788888777652111 1222232222222 2233456678888
Q ss_pred HHhhcCChHHHHHHHHHhHHHHHhhcChh---hhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccC------------
Q 004025 378 VKLFASNDRAIRVALLQHIDQYGQSFSAQ---VVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKL------------ 442 (778)
Q Consensus 378 ~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~---~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL------------ 442 (778)
..+..+.|..+|...++.|..++...+.. .+...|++.++.++.|.++.+|..++..+..++...
T Consensus 223 ~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~ 302 (462)
T 1ibr_B 223 CEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAE 302 (462)
T ss_dssp HHHTTCSSHHHHHHHHHHHHHHHHHCGGGCTTTTTTTHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHCCTTC
T ss_pred HHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 88888899999999999999998877653 233279999999999999999999999888777542
Q ss_pred --------Chhh---HhHHHHHHHHhhcc-------CCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCc
Q 004025 443 --------SQRT---ISGSLLKYLSKLQV-------DEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFS 504 (778)
Q Consensus 443 --------~~~~---l~~~LL~~laklq~-------D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~ 504 (778)
.... ....++|.|.+... |++..+|..++.||+.|+..+++ ..-..+++.+. ..|+|+.|
T Consensus 303 ~~~~~~~~~~~~~~~~~~~l~p~l~~~l~~~d~d~~~~~~~~r~~a~~~L~~l~~~~~~-~~~~~~~~~l~-~~l~~~~~ 380 (462)
T 1ibr_B 303 QGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCED-DIVPHVLPFIK-EHIKNPDW 380 (462)
T ss_dssp SSSCSSCCCCCHHHHHHHHHHHHHHHHTTCCCSSCCTTCCSHHHHHHHHHHHHHHHTTT-THHHHHHHHHH-HHTTCSSH
T ss_pred cCCCccchhHHHHHHHhhhccHHHHHHHHhcccccccccchHHHHHHHHHHHHHHhccH-HHHHHHHHHHH-HHhcCCCh
Confidence 0011 12567777755442 23568999999999999999984 44557788888 89999999
Q ss_pred hhhhheeee--------c------c--------------CCHHHHHHHHHHHHHHHHHHHH
Q 004025 505 PARGAAKIL--------S------Y--------------LNCDVRSKAFQAVDQFLQIVKQ 537 (778)
Q Consensus 505 ~~R~A~l~a--------~------~--------------~~~~VR~~a~~~~~~~l~~l~~ 537 (778)
..|.||+++ . + ++..||..|..++..|.+.+..
T Consensus 381 ~~r~aal~~l~~l~~~~~~~~~~~~l~~~~~~l~~~l~d~~~~Vr~~a~~~l~~~~~~~~~ 441 (462)
T 1ibr_B 381 RYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPE 441 (462)
T ss_dssp HHHHHHHHHHHHTSSSSCTTTTCTTTTTHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhccc
Confidence 999999998 0 1 7899999999999999987744
|
| >3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic} | Back alignment and structure |
|---|
Probab=98.31 E-value=3.8e-06 Score=83.79 Aligned_cols=139 Identities=17% Similarity=0.211 Sum_probs=108.7
Q ss_pred hhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHH
Q 004025 372 KVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSL 451 (778)
Q Consensus 372 ~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~L 451 (778)
..+|.++.++.++|..+|...+.-|-.+.. ...+|.+...+.|.++.||..++.++..+.. .+.
T Consensus 50 ~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~--------~~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~--------~~~ 113 (211)
T 3ltm_A 50 RAVEPLIKALKDEDAWVRRAAADALGQIGD--------ERAVEPLIKALKDEDGWVRQSAAVALGQIGD--------ERA 113 (211)
T ss_dssp GGHHHHHHHTTCSCHHHHHHHHHHHHHHCC--------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCC--------GGG
T ss_pred cHHHHHHHHHcCCCHHHHHHHHHHHHhhCC--------HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCc--------HHH
Confidence 577889999999999999888887776642 3577899999999999999999999876642 235
Q ss_pred HHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhhheeee--cc--------------
Q 004025 452 LKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL--SY-------------- 515 (778)
Q Consensus 452 L~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~l~a--~~-------------- 515 (778)
++.|.++..|+++.||..++.+|+++.. .-.++.+. +.|+|+.+..|.+++.+ .+
T Consensus 114 ~~~L~~~l~d~~~~vr~~a~~aL~~~~~--------~~~~~~L~-~~l~d~~~~vr~~a~~aL~~~~~~~~~~~L~~~l~ 184 (211)
T 3ltm_A 114 VEPLIKALKDEDWFVRIAAAFALGEIGD--------ERAVEPLI-KALKDEDGWVRQSAADALGEIGGERVRAAMEKLAE 184 (211)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHHCC--------GGGHHHHH-HHTTCSSHHHHHHHHHHHHHHCSHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHcCC--------HHHHHHHH-HHHcCCCHHHHHHHHHHHHHhCchhHHHHHHHHHh
Confidence 5667777789999999999999999863 23567788 89999999999999988 11
Q ss_pred -CCHHHHHHHHHHHHHHHHHH
Q 004025 516 -LNCDVRSKAFQAVDQFLQIV 535 (778)
Q Consensus 516 -~~~~VR~~a~~~~~~~l~~l 535 (778)
++..||..|.+++..+-.+-
T Consensus 185 d~~~~vr~~A~~aL~~~~~~~ 205 (211)
T 3ltm_A 185 TGTGFARKVAVNYLETHKSFN 205 (211)
T ss_dssp HCCHHHHHHHHHHHHC-----
T ss_pred CCCHHHHHHHHHHHHhcCCCC
Confidence 78888888888887665443
|
| >3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic} | Back alignment and structure |
|---|
Probab=98.24 E-value=6.5e-06 Score=81.45 Aligned_cols=136 Identities=18% Similarity=0.218 Sum_probs=101.8
Q ss_pred hhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHH
Q 004025 372 KVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSL 451 (778)
Q Consensus 372 ~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~L 451 (778)
..+|.+++++.++|..+|...+..|..+.. ...+|.+...+.|.++.+|..++.++..+.. .+.
T Consensus 45 ~~~~~L~~~l~~~~~~vr~~a~~~L~~~~~--------~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~--------~~~ 108 (201)
T 3ltj_A 45 RAVEPLIKALKDEDAWVRRAAADALGQIGD--------ERAVEPLIKALKDEDGWVRQSAAVALGQIGD--------ERA 108 (201)
T ss_dssp GGHHHHHHHTTCSSHHHHHHHHHHHHHHCC--------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCC--------GGG
T ss_pred hHHHHHHHHHcCCCHHHHHHHHHHHHhhCC--------HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCc--------HHH
Confidence 467888888888888888888877766532 2467888888888888899988888876542 234
Q ss_pred HHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhhheeee--cc--------------
Q 004025 452 LKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL--SY-------------- 515 (778)
Q Consensus 452 L~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~l~a--~~-------------- 515 (778)
++.|.++..|+++.||..++.+|+++.. .-.++.+. +.|+|+.+..|.+++.+ .+
T Consensus 109 ~~~L~~~l~d~~~~vr~~a~~aL~~~~~--------~~~~~~L~-~~l~d~~~~vr~~A~~aL~~~~~~~~~~~L~~~l~ 179 (201)
T 3ltj_A 109 VEPLIKALKDEDWFVRIAAAFALGEIGD--------ERAVEPLI-KALKDEDGWVRQSAADALGEIGGERVRAAMEKLAE 179 (201)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHHTC--------GGGHHHHH-HHTTCSSHHHHHHHHHHHHHHCSHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHhCC--------HHHHHHHH-HHHcCCCHHHHHHHHHHHHHhCchhHHHHHHHHHh
Confidence 5556666678888899999988888863 23567777 88888888888888887 11
Q ss_pred -CCHHHHHHHHHHHHHHH
Q 004025 516 -LNCDVRSKAFQAVDQFL 532 (778)
Q Consensus 516 -~~~~VR~~a~~~~~~~l 532 (778)
++..||..|.+++..+-
T Consensus 180 d~~~~vr~~A~~aL~~l~ 197 (201)
T 3ltj_A 180 TGTGFARKVAVNYLETHK 197 (201)
T ss_dssp HCCHHHHHHHHHHHHHCC
T ss_pred CCCHHHHHHHHHHHHHHH
Confidence 77888888888776543
|
| >2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.22 E-value=6.9e-06 Score=85.10 Aligned_cols=186 Identities=11% Similarity=0.107 Sum_probs=138.8
Q ss_pred HHhhhcccCChhhHhHhhhhchh-hhcCCChhh--h--hhchHHHHHHHHh-hCCC--CchhhHHHHHhccCCC-h--h-
Q 004025 300 HFMEILNLKDSVEKDTFFRKLPN-LAEQLPRQI--V--LKKLLPLLASALE-FGSA--AAPALTALLKMGSWLS-T--E- 367 (778)
Q Consensus 300 ~~Le~l~~k~~~EK~~F~~~L~~-~l~~fp~~~--~--~~kILP~Ll~~~~-~~~~--~~~~L~~llki~~~l~-~--e- 367 (778)
.|.+.+..++..||.+-+..|.. .++.-|.-. . ...++..|.+.+. ..+. ....+..+-.++..+. . +
T Consensus 20 ~f~~~l~s~~w~eRk~al~~L~~~~~~~~~~i~~~~~~~~~~~~~L~~~l~~D~n~~v~~~A~~al~~la~~l~~~~f~~ 99 (249)
T 2qk1_A 20 DFQERITSSKWKDRVEALEEFWDSVLSQTKKLKSTSQNYSNLLGIYGHIIQKDANIQAVALAAQSVELICDKLKTPGFSK 99 (249)
T ss_dssp THHHHHTCSSHHHHHHHHHHHHHHTGGGCCCBCCTTCCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHCTTTSCH
T ss_pred hHHHHhhcCCHHHHHHHHHHHHHHHHhcCCccccCcccHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHhcccccccH
Confidence 34555677888888888888887 775433322 1 1367888888873 3331 1223444445555554 2 3
Q ss_pred hhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhh---hhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCCh
Q 004025 368 EFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVV---DEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQ 444 (778)
Q Consensus 368 ef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v---~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~ 444 (778)
.|...++|.|+..|+.....||-.+-.-+..+++.+++..+ -+.+++.++.+++..++.+|++++..|..++..-..
T Consensus 100 ~y~~~llp~ll~~l~dkk~~V~~aa~~al~~i~~~~~~~~~~~~l~~ll~~l~~~l~~k~~~vk~~al~~l~~~~~~~~~ 179 (249)
T 2qk1_A 100 DYVSLVFTPLLDRTKEKKPSVIEAIRKALLTICKYYDPLASSGRNEDMLKDILEHMKHKTPQIRMECTQLFNASMKEEKD 179 (249)
T ss_dssp HHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHSCTTCTTCTTHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHccccccCCcHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCC
Confidence 56678899999999998889988888888889998865432 236999999999999999999999999999876653
Q ss_pred --hh---Hh-HHHHHHHHhhccCCCCcchhhHHHHHHHhhhhccccc
Q 004025 445 --RT---IS-GSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGT 485 (778)
Q Consensus 445 --~~---l~-~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~ 485 (778)
.. .- ..|+|.|.++-.|+++.||..++-||+.|+..+++..
T Consensus 180 ~~~~l~~~l~~~iip~l~~~l~D~~~~VR~aA~~~l~~i~~~vG~~~ 226 (249)
T 2qk1_A 180 GYSTLQRYLKDEVVPIVIQIVNDTQPAIRTIGFESFAILIKIFGMNT 226 (249)
T ss_dssp CSHHHHHHHTTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCSGG
T ss_pred cchhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCHHH
Confidence 22 23 5789999999999999999999999999999999744
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=98.16 E-value=3.3e-06 Score=91.83 Aligned_cols=140 Identities=9% Similarity=0.093 Sum_probs=87.9
Q ss_pred ccCCCCCC-CceEEEEeEECCCCCcEEEEEEe--CCCCchhHHHHHHHHHHHHhcCC--CCCeeeEeeeeEecccccCCc
Q 004025 24 GDPYPSAW-GSWSHFQGTSKDDGSPVSIFSIS--GTNAQDGHLAAARNGVKRLRTVR--HPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 24 ~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~--~~~~~~~~~~~~~~ev~~Lk~Lr--HPnIlk~~d~~e~e~~~g~~~ 98 (778)
.+.++.|. + .+|..+.. +..+.+|+.. ..... .....+.+|+++|+.|+ +..+.+++..+++.+..
T Consensus 43 ~~~l~~G~sn--~~y~v~~~--~~~~vlr~~~~p~~~~~-~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~---- 113 (359)
T 3dxp_A 43 VEQFKGGQSN--PTFKLVTP--GQTYVMRAKPGPKSKLL-PSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVI---- 113 (359)
T ss_dssp EEECCC-CCS--CEEEEECS--SCEEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTT----
T ss_pred EEEcCCcccc--eEEEEEEC--CceEEEEeCCCCCCCCC-CcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCcc----
Confidence 34566665 5 78887754 4678888765 22111 11335778999999987 44577888777654211
Q ss_pred ccEEEEEecCCc--ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHc------------------------------
Q 004025 99 KITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNN------------------------------ 146 (778)
Q Consensus 99 ~~~lyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~------------------------------ 146 (778)
...|+||||+. ++.+. .......+.....+.+++.+|..||.
T Consensus 114 -g~~~~vme~v~G~~l~~~-----~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (359)
T 3dxp_A 114 -GRAFYIMEFVSGRVLWDQ-----SLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYK 187 (359)
T ss_dssp -SSCEEEEECCCCBCCCCT-----TCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHH
T ss_pred -CCeEEEEEecCCeecCCC-----ccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHH
Confidence 25789999993 34210 00011122223347788888888885
Q ss_pred ---------------------------CCCccccccCCCCeEEcCCCc--EEEEecccccc
Q 004025 147 ---------------------------DCKLVHGNVCLSSVVVTQTLD--WKLHAFDVLSE 178 (778)
Q Consensus 147 ---------------------------~~~ivH~dLkp~NI~v~~~g~--~KL~dFgla~~ 178 (778)
...++|||+++.||+++.++. ..|+||+.+..
T Consensus 188 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 188 LSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred hcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 146999999999999997764 68999998764
|
| >3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic} | Back alignment and structure |
|---|
Probab=98.13 E-value=1.2e-05 Score=79.58 Aligned_cols=140 Identities=19% Similarity=0.221 Sum_probs=115.0
Q ss_pred hhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhh
Q 004025 367 EEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRT 446 (778)
Q Consensus 367 eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~ 446 (778)
..|.....+.+++++.++|..+|...+..|..+.. ...+|.++..+.|.++.+|..++.++..+..
T Consensus 9 ~~~~~~~~~~~i~~L~~~~~~vr~~A~~~L~~~~~--------~~~~~~L~~~l~~~~~~vr~~a~~~L~~~~~------ 74 (201)
T 3ltj_A 9 HHTDPEKVEMYIKNLQDDSYYVRRAAAYALGKIGD--------ERAVEPLIKALKDEDAWVRRAAADALGQIGD------ 74 (201)
T ss_dssp CCCCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHCC--------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCC------
T ss_pred cccCCcchHHHHHHhcCCCHHHHHHHHHHHHhcCC--------hhHHHHHHHHHcCCCHHHHHHHHHHHHhhCC------
Confidence 34556678999999999999999999988876653 3578999999999999999999999977652
Q ss_pred HhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhhheeee--cc---------
Q 004025 447 ISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL--SY--------- 515 (778)
Q Consensus 447 l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~l~a--~~--------- 515 (778)
.+.++.|.++..|+++.||..++.+|+++.. .-.++.+. +.|+|+.+..|.+++.+ .+
T Consensus 75 --~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~--------~~~~~~L~-~~l~d~~~~vr~~a~~aL~~~~~~~~~~~L 143 (201)
T 3ltj_A 75 --ERAVEPLIKALKDEDGWVRQSAAVALGQIGD--------ERAVEPLI-KALKDEDWFVRIAAAFALGEIGDERAVEPL 143 (201)
T ss_dssp --GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCC--------GGGHHHHH-HHTTCSSHHHHHHHHHHHHHHTCGGGHHHH
T ss_pred --HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCc--------HHHHHHHH-HHHcCCCHHHHHHHHHHHHHhCCHHHHHHH
Confidence 2345666677789999999999999999864 23567787 89999999999999988 11
Q ss_pred ------CCHHHHHHHHHHHHHH
Q 004025 516 ------LNCDVRSKAFQAVDQF 531 (778)
Q Consensus 516 ------~~~~VR~~a~~~~~~~ 531 (778)
++..||..|..++..+
T Consensus 144 ~~~l~d~~~~vr~~A~~aL~~~ 165 (201)
T 3ltj_A 144 IKALKDEDGWVRQSAADALGEI 165 (201)
T ss_dssp HHHTTCSSHHHHHHHHHHHHHH
T ss_pred HHHHcCCCHHHHHHHHHHHHHh
Confidence 7889999999888765
|
| >3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic} | Back alignment and structure |
|---|
Probab=98.13 E-value=1.3e-05 Score=79.86 Aligned_cols=136 Identities=19% Similarity=0.229 Sum_probs=113.3
Q ss_pred hhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHH
Q 004025 371 VKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGS 450 (778)
Q Consensus 371 ~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~ 450 (778)
...++.++.++.++|..+|...+..|..+.. ...+|.++..+.|.++.+|..++.++..+.. .+
T Consensus 18 ~~~~~~L~~~L~~~~~~vR~~A~~~L~~~~~--------~~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~--------~~ 81 (211)
T 3ltm_A 18 PEKVEMYIKNLQDDSYYVRRAAAYALGKIGD--------ERAVEPLIKALKDEDAWVRRAAADALGQIGD--------ER 81 (211)
T ss_dssp GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCC--------GGGHHHHHHHTTCSCHHHHHHHHHHHHHHCC--------GG
T ss_pred HhHHHHHHHHHcCCCHHHHHHHHHHHHHhCC--------ccHHHHHHHHHcCCCHHHHHHHHHHHHhhCC--------HH
Confidence 4567889999999999999999988877654 3578999999999999999999999987653 24
Q ss_pred HHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhhheeee--cc-------------
Q 004025 451 LLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL--SY------------- 515 (778)
Q Consensus 451 LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~l~a--~~------------- 515 (778)
.++.|.++..|+++.||..++.+|+++.. .-.++.+. +.|+|+.+..|.+++.+ .+
T Consensus 82 ~~~~L~~~l~~~~~~vr~~a~~aL~~~~~--------~~~~~~L~-~~l~d~~~~vr~~a~~aL~~~~~~~~~~~L~~~l 152 (211)
T 3ltm_A 82 AVEPLIKALKDEDGWVRQSAAVALGQIGD--------ERAVEPLI-KALKDEDWFVRIAAAFALGEIGDERAVEPLIKAL 152 (211)
T ss_dssp GHHHHHHHTTCSSHHHHHHHHHHHHHHCC--------GGGHHHHH-HHTTCSSHHHHHHHHHHHHHHCCGGGHHHHHHHT
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhCc--------HHHHHHHH-HHHhCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 55666677789999999999999999864 23467788 89999999999999998 11
Q ss_pred --CCHHHHHHHHHHHHHH
Q 004025 516 --LNCDVRSKAFQAVDQF 531 (778)
Q Consensus 516 --~~~~VR~~a~~~~~~~ 531 (778)
++..||..|.+++..+
T Consensus 153 ~d~~~~vr~~a~~aL~~~ 170 (211)
T 3ltm_A 153 KDEDGWVRQSAADALGEI 170 (211)
T ss_dssp TCSSHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHh
Confidence 7889999999988765
|
| >4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* | Back alignment and structure |
|---|
Probab=98.12 E-value=1.2e-05 Score=97.67 Aligned_cols=205 Identities=14% Similarity=0.122 Sum_probs=151.6
Q ss_pred cCChhhHhHhhhhchhhhcCCChhhhhh--chHHHHHHHHhhCCC--CchhhHHHHHhccCCCh----hhhhhhhHHHHH
Q 004025 307 LKDSVEKDTFFRKLPNLAEQLPRQIVLK--KLLPLLASALEFGSA--AAPALTALLKMGSWLST----EEFSVKVLPTIV 378 (778)
Q Consensus 307 ~k~~~EK~~F~~~L~~~l~~fp~~~~~~--kILP~Ll~~~~~~~~--~~~~L~~llki~~~l~~----eef~~~i~P~i~ 378 (778)
-.+.+-|...++.|..+.+..|..+..+ .+++.+++.+..... ...++.-+..+++.... ..|...++|.++
T Consensus 226 d~~~~vr~~a~~~L~~l~~~~~~~~~~~l~~l~~~l~~~~~~~~~~vr~~a~e~l~~l~~~~~~~~~~~~~~~~l~p~ll 305 (852)
T 4fdd_A 226 DEEPEVRKNVCRALVMLLEVRMDRLLPHMHNIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDVLVRHLPKLIPVLV 305 (852)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCHHHHGGGHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHTTSTTHHHHHTTTHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHH
Confidence 3556667777888887777777655443 577777777664331 11223334455543222 235557788887
Q ss_pred Hhh-----------cC-----------ChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHH
Q 004025 379 KLF-----------AS-----------NDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSML 436 (778)
Q Consensus 379 ~lF-----------~~-----------~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~ 436 (778)
+.+ .. .++.+|......|..+...+++. +-..++|.+...+.|.+..+|+.++.++-
T Consensus 306 ~~l~~~e~d~~~~~~d~~ed~~~dd~~~~~~vr~~a~~~L~~la~~~~~~-~~~~l~~~l~~~l~~~~~~~R~aa~~alg 384 (852)
T 4fdd_A 306 NGMKYSDIDIILLKGDVEGGSGGDDTISDWNLRKCSAAALDVLANVYRDE-LLPHILPLLKELLFHHEWVVKESGILVLG 384 (852)
T ss_dssp HHTSCCHHHHHHHHC------------CCCCHHHHHHHHHHHHHHHHGGG-GHHHHHHHHHHHHTCSSHHHHHHHHHHHH
T ss_pred HHcCCcHhHHHHhcCCcccccccccccccchHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 776 23 34578999999999999988855 45579999999999999999999999999
Q ss_pred hhhccCChh--hHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhccccc---chhhhHHHHHhhhhcCCCchhhhhee
Q 004025 437 VLAPKLSQR--TISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGT---RKRVLINAFTVRALRDTFSPARGAAK 511 (778)
Q Consensus 437 ~l~pkL~~~--~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~---~~~vL~~af~~~~lkD~f~~~R~A~l 511 (778)
.++....+. .....+++.|.++..|+.+.||..++-|||+++..+.... --.-+++.+. +.|+|+.+..|.+|.
T Consensus 385 ~i~~~~~~~~~~~l~~~l~~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~~~~~~~~~~~ll~~L~-~~L~d~~~~vr~~a~ 463 (852)
T 4fdd_A 385 AIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELL-KRILDSNKRVQEAAC 463 (852)
T ss_dssp HTTTTTHHHHGGGHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTHHHHHHSCTTTTHHHHHHHHH-HHHTCSSHHHHHHHH
T ss_pred HHHhcchHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHH-HHHhCCCHHHHHHHH
Confidence 999876542 2357899999999999999999999999999999886532 2334677787 899999999999988
Q ss_pred ee
Q 004025 512 IL 513 (778)
Q Consensus 512 ~a 513 (778)
.+
T Consensus 464 ~a 465 (852)
T 4fdd_A 464 SA 465 (852)
T ss_dssp HH
T ss_pred HH
Confidence 88
|
| >1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A | Back alignment and structure |
|---|
Probab=98.10 E-value=2e-05 Score=99.63 Aligned_cols=254 Identities=9% Similarity=0.075 Sum_probs=167.5
Q ss_pred CcchHHHHHHHhccCCCCCCChHHHHhcccCCccccccccc---hhhhhhH-HhhhcccCChhhHhHhhhhchhhhcCCC
Q 004025 253 PKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQN---KLVDTIH-FMEILNLKDSVEKDTFFRKLPNLAEQLP 328 (778)
Q Consensus 253 P~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff~n---~lv~~~~-~Le~l~~k~~~EK~~F~~~L~~~l~~fp 328 (778)
+..+..++.++.+.|+..|-.+.+-|.+. +...++.. ..-..+. .++.+.-++...|..-...|..+...++
T Consensus 5 ~~~l~~lL~~l~s~d~~~R~~A~~~L~~~----l~~~~~~~~~~~~~~il~~Ll~~L~d~~~~vR~~A~~~L~~l~~~~~ 80 (1230)
T 1u6g_C 5 SYHISNLLEKMTSSDKDFRFMATNDLMTE----LQKDSIKLDDDSERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKVK 80 (1230)
T ss_dssp CHHHHHHHHHTTCSSHHHHHHHHHHHHHH----TSSSCCSCCTTHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHTTSC
T ss_pred HhHHHHHHHhcCCCCHhHHHHHHHHHHHH----HcccccCCChhHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhCC
Confidence 34456677777777777776553333322 11112211 0111111 2333444566666666667777777777
Q ss_pred hhhhhhchHHHHHHHHhhCCCC--chhhHHHHHhccCCChh--------hhhhhhHHHHHHhhc-CChHHHHHHHHHhHH
Q 004025 329 RQIVLKKLLPLLASALEFGSAA--APALTALLKMGSWLSTE--------EFSVKVLPTIVKLFA-SNDRAIRVALLQHID 397 (778)
Q Consensus 329 ~~~~~~kILP~Ll~~~~~~~~~--~~~L~~llki~~~l~~e--------ef~~~i~P~i~~lF~-~~Dr~iR~~LL~~l~ 397 (778)
+. ....|++.|+..+...... ..+...+-.|+..+..+ .|...++|.++..+. +.+..+|...|+.|.
T Consensus 81 ~~-~~~~i~~~Ll~~l~d~~~~vR~~a~~~L~~i~~~l~~~~~~~~~~~~~~~~llp~L~~~l~~~~~~~~~~~al~~l~ 159 (1230)
T 1u6g_C 81 EY-QVETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMA 159 (1230)
T ss_dssp HH-HHHHHHHHHHHHTTCSSSHHHHHHHHHHHHHHHHCC-----CCTHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHH
T ss_pred HH-HHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhCCCcccccchHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHH
Confidence 73 3456889999887654321 11223333555555544 477889999999998 588899999999998
Q ss_pred HHHhhcChhh--hhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHHHHHH-HhhccCCCCcchhhHHHHH
Q 004025 398 QYGQSFSAQV--VDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYL-SKLQVDEEPAIRTNTTILL 474 (778)
Q Consensus 398 ~~~~~l~~~~--v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~LL~~l-aklq~D~~~~IRtnt~icl 474 (778)
.+++.+++.. ..+.+++.++.++.|.++.||+.+++++..++..+++..+. .+++.| ..|..+.+..+|..++.||
T Consensus 160 ~~~~~~~~~l~~~~~~ll~~l~~~L~~~~~~vR~~a~~al~~l~~~~~~~~~~-~~l~~l~~~L~~~~~~~~r~~a~~~l 238 (1230)
T 1u6g_C 160 DMLSRQGGLLVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGNIVFV-DLIEHLLSELSKNDSMSTTRTYIQCI 238 (1230)
T ss_dssp HHHHHTCSSCTTTHHHHHHHHGGGGGCSSHHHHHHHHHHHHHHTTTC----CT-THHHHHHHHHHHTCSSCSCTTHHHHH
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhcCHHHHH-HHHHHHHHHhccCCchhHHHHHHHHH
Confidence 8886655432 24679999999999999999999999999999988876533 344444 3344455578999999999
Q ss_pred HHhhhhcccccc--hhhhHHHHHhhhhcCCCchhhhheeee
Q 004025 475 GNIASHLNEGTR--KRVLINAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 475 ~kIa~~L~~~~~--~~vL~~af~~~~lkD~f~~~R~A~l~a 513 (778)
+.|+...+..-+ -.-|++.+. +.+.|.....|.+++.+
T Consensus 239 ~~l~~~~~~~~~~~l~~l~~~ll-~~l~d~~~~vR~~a~~~ 278 (1230)
T 1u6g_C 239 AAISRQAGHRIGEYLEKIIPLVV-KFCNVDDDELREYCIQA 278 (1230)
T ss_dssp HHHHHHSSGGGTTSCTTHHHHHH-HHHSSCCTTTHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHH-HHhcCCCHHHHHHHHHH
Confidence 999998775332 245788888 89999988888877765
|
| >4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* | Back alignment and structure |
|---|
Probab=98.04 E-value=5.1e-05 Score=92.07 Aligned_cols=228 Identities=11% Similarity=0.075 Sum_probs=156.8
Q ss_pred CChhhHhHhhhhchhhhcCCChhhhh-------hchHHHHHHHHhhCCCC--chhhHHHHHhccCCChh--hhhhhhHHH
Q 004025 308 KDSVEKDTFFRKLPNLAEQLPRQIVL-------KKLLPLLASALEFGSAA--APALTALLKMGSWLSTE--EFSVKVLPT 376 (778)
Q Consensus 308 k~~~EK~~F~~~L~~~l~~fp~~~~~-------~kILP~Ll~~~~~~~~~--~~~L~~llki~~~l~~e--ef~~~i~P~ 376 (778)
.+...|..-+..|..+.+.+++.+.. ..++|.|++.+...+.. ..++..+-.+....+.. .....++|.
T Consensus 140 ~~~~~r~~al~~L~~i~~~~~~~~~~~~~~~~~~~il~~l~~~l~~~~~~vR~~A~~aL~~~~~~~~~~~~~~~~~~l~~ 219 (852)
T 4fdd_A 140 EDYNTCEGAFGALQKICEDSAEILDSDVLDRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIEN 219 (852)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTTHHHHCSSSSCHHHHHHHHTTTTTCSSHHHHHHHHHHHHTTTTTTCHHHHTSHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHhchhhhcchHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 34555666666666666666665432 34667776655532211 11222232333333322 122357888
Q ss_pred HHHhhcCChHHHHHHHHHhHHHHHhhcChhhh--hhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhh----HhHH
Q 004025 377 IVKLFASNDRAIRVALLQHIDQYGQSFSAQVV--DEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRT----ISGS 450 (778)
Q Consensus 377 i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v--~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~----l~~~ 450 (778)
++++..+.|..+|...++.|..+.+..+.... -+.|++.++.++.|.++.+|..++..+..++..-..+. ....
T Consensus 220 l~~~~~d~~~~vr~~a~~~L~~l~~~~~~~~~~~l~~l~~~l~~~~~~~~~~vr~~a~e~l~~l~~~~~~~~~~~~~~~~ 299 (852)
T 4fdd_A 220 LFALAGDEEPEVRKNVCRALVMLLEVRMDRLLPHMHNIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDVLVRHLPK 299 (852)
T ss_dssp HHHHHTCCCHHHHHHHHHHHHHHHHHCHHHHGGGHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHTTSTTHHHHHTTTHHH
T ss_pred HHHHcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHhcchhHHHHHHHHHHH
Confidence 88888899999999999999888877654321 23589999999999999999999999988876422111 2346
Q ss_pred HHHHHHhhc-----------cC-----------CCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhh
Q 004025 451 LLKYLSKLQ-----------VD-----------EEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARG 508 (778)
Q Consensus 451 LL~~laklq-----------~D-----------~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~ 508 (778)
|+|.|.+.- .| ..-.||...+-||+.++..+++.. -..+++.+. ..++|+.|..|.
T Consensus 300 l~p~ll~~l~~~e~d~~~~~~d~~ed~~~dd~~~~~~vr~~a~~~L~~la~~~~~~~-~~~l~~~l~-~~l~~~~~~~R~ 377 (852)
T 4fdd_A 300 LIPVLVNGMKYSDIDIILLKGDVEGGSGGDDTISDWNLRKCSAAALDVLANVYRDEL-LPHILPLLK-ELLFHHEWVVKE 377 (852)
T ss_dssp HHHHHHHHTSCCHHHHHHHHC------------CCCCHHHHHHHHHHHHHHHHGGGG-HHHHHHHHH-HHHTCSSHHHHH
T ss_pred HHHHHHHHcCCcHhHHHHhcCCcccccccccccccchHHHHHHHHHHHHHHhccHHH-HHHHHHHHH-HHhcCCCHHHHH
Confidence 777765543 34 345789999999999999998543 446788888 899999999999
Q ss_pred heeee-----c--------c--------------CCHHHHHHHHHHHHHHHHHHHH
Q 004025 509 AAKIL-----S--------Y--------------LNCDVRSKAFQAVDQFLQIVKQ 537 (778)
Q Consensus 509 A~l~a-----~--------~--------------~~~~VR~~a~~~~~~~l~~l~~ 537 (778)
||+++ . | ++..||..|..++..|.+.+..
T Consensus 378 aa~~alg~i~~~~~~~~~~~l~~~l~~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~~ 433 (852)
T 4fdd_A 378 SGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVS 433 (852)
T ss_dssp HHHHHHHHTTTTTHHHHGGGHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHhcchHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 99988 1 1 7889999999999888766543
|
| >4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene} | Back alignment and structure |
|---|
Probab=98.04 E-value=2.1e-05 Score=79.68 Aligned_cols=140 Identities=16% Similarity=0.180 Sum_probs=90.9
Q ss_pred hhHHHHHHhhcCChHHHHHHHHHhHHHHHhh---cChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCC---hh
Q 004025 372 KVLPTIVKLFASNDRAIRVALLQHIDQYGQS---FSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLS---QR 445 (778)
Q Consensus 372 ~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~---l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~---~~ 445 (778)
.++|.+++++.+.+..+|...+.-|..+... .....+...++|.++..+.+.++.+|+.++.++..++..-. ..
T Consensus 44 g~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~l~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 123 (252)
T 4hxt_A 44 GGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKA 123 (252)
T ss_dssp THHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred CCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 4677777777777777776666666655533 22234445577778888887788888887777777774221 12
Q ss_pred hHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhh----hHHHHHhhhhcCCCchhhhheeee
Q 004025 446 TISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRV----LINAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 446 ~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~v----L~~af~~~~lkD~f~~~R~A~l~a 513 (778)
.+....++.|.++..++++.+|.+++-||+.|+..- +..++.+ .++.+. ..|+++....|..++.+
T Consensus 124 ~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~-~~~~~~~~~~~~i~~L~-~ll~~~~~~v~~~a~~~ 193 (252)
T 4hxt_A 124 IVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGP-DEAIKAIVDAGGVEVLV-KLLTSTDSEVQKEAARA 193 (252)
T ss_dssp HHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSC-HHHHHHHHHTTHHHHHH-HHTTCSCHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCC-HHHHHHHHHCcCHHHHH-HHHCCCCHHHHHHHHHH
Confidence 233456777777777777778888888888877642 2222222 566777 77777777777777666
|
| >2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A | Back alignment and structure |
|---|
Probab=97.99 E-value=8.4e-05 Score=89.52 Aligned_cols=226 Identities=12% Similarity=0.106 Sum_probs=155.9
Q ss_pred ChhhHhHhhhhchhhhcCCChhh-----hhhchHHHHHHHHhhCCCCc----hhhHHHHHhccCC----ChhhhhhhhHH
Q 004025 309 DSVEKDTFFRKLPNLAEQLPRQI-----VLKKLLPLLASALEFGSAAA----PALTALLKMGSWL----STEEFSVKVLP 375 (778)
Q Consensus 309 ~~~EK~~F~~~L~~~l~~fp~~~-----~~~kILP~Ll~~~~~~~~~~----~~L~~llki~~~l----~~eef~~~i~P 375 (778)
+...|...+.-|..+.+.+.+.+ ....|+|.|...+....... .++..+..+...+ ..+.+...+++
T Consensus 148 ~~~~r~~al~~l~~l~~~~~~~~~~~~~~~~~ll~~l~~~l~~~~~~~~vr~~al~~l~~~~~~~~~~~~~~~~~~~ll~ 227 (861)
T 2bpt_A 148 PENVKRASLLALGYMCESADPQSQALVSSSNNILIAIVQGAQSTETSKAVRLAALNALADSLIFIKNNMEREGERNYLMQ 227 (861)
T ss_dssp CHHHHHHHHHHHHHHHHTSSTTSSTTGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHGGGCHHHHTSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCChhhhHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHccChhHHHHHHH
Confidence 45556666666666665554432 34557777777766542111 1222222222112 22223456888
Q ss_pred HHHHhhcCChHHHHHHHHHhHHHHHhhcChh---hhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCCh--------
Q 004025 376 TIVKLFASNDRAIRVALLQHIDQYGQSFSAQ---VVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQ-------- 444 (778)
Q Consensus 376 ~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~---~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~-------- 444 (778)
.+..+..+.+..+|...++.|..++...+.. .+.+.|++.+..++.|.+..+|..++..+..++.....
T Consensus 228 ~l~~~~~~~~~~~r~~a~~~l~~l~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~ 307 (861)
T 2bpt_A 228 VVCEATQAEDIEVQAAAFGCLCKIMSKYYTFMKPYMEQALYALTIATMKSPNDKVASMTVEFWSTICEEEIDIAYELAQF 307 (861)
T ss_dssp HHHHHHTCSCHHHHHHHHHHHHHHHHHHGGGCHHHHHHTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhhhhhc
Confidence 8888888899999999999998888776643 23337899999999999999999999988877765311
Q ss_pred -----------hhHhHHHHHHHHhhcc-------CCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCchh
Q 004025 445 -----------RTISGSLLKYLSKLQV-------DEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPA 506 (778)
Q Consensus 445 -----------~~l~~~LL~~laklq~-------D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~ 506 (778)
+.....++|.|..... |++..+|..+.-||+.++..++... -..+++.+. ..+.|+.|..
T Consensus 308 ~~~~~~~~~~~~~~~~~il~~ll~~l~~~~~d~~d~~~~~r~~a~~~L~~l~~~~~~~~-~~~l~~~l~-~~l~~~~~~~ 385 (861)
T 2bpt_A 308 PQSPLQSYNFALSSIKDVVPNLLNLLTRQNEDPEDDDWNVSMSAGACLQLFAQNCGNHI-LEPVLEFVE-QNITADNWRN 385 (861)
T ss_dssp TTCSCCCCCHHHHHHHHHHHHHHHHTTCCCCC-CCCCCHHHHHHHHHHHHHHHHHGGGG-HHHHHHHHH-HHTTCSSHHH
T ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHHHHHccHhH-HHHHHHHHH-HHcCCCChhH
Confidence 1223567777755433 2347899999999999999998544 446778888 8999999999
Q ss_pred hhheeee--------c------c--------------CCHHHHHHHHHHHHHHHHHHH
Q 004025 507 RGAAKIL--------S------Y--------------LNCDVRSKAFQAVDQFLQIVK 536 (778)
Q Consensus 507 R~A~l~a--------~------~--------------~~~~VR~~a~~~~~~~l~~l~ 536 (778)
|.||+.+ . | ++..||..|..++..|...+.
T Consensus 386 r~~a~~~l~~i~~~~~~~~~~~~l~~il~~l~~~l~d~~~~vr~~a~~~l~~l~~~~~ 443 (861)
T 2bpt_A 386 REAAVMAFGSIMDGPDKVQRTYYVHQALPSILNLMNDQSLQVKETTAWCIGRIADSVA 443 (861)
T ss_dssp HHHHHHHHHHTSSSSCHHHHHHHHHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHhh
Confidence 9999887 0 0 678899998888877776654
|
| >1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A | Back alignment and structure |
|---|
Probab=97.98 E-value=4.9e-05 Score=84.31 Aligned_cols=140 Identities=10% Similarity=0.097 Sum_probs=105.6
Q ss_pred hhhHHHHHHhhcCC--hHHHHHHHHHhHHHHHhhcChhh---hhhcchHHHHhhcCCC--cHHHHHHHHHHHHhhhccCC
Q 004025 371 VKVLPTIVKLFASN--DRAIRVALLQHIDQYGQSFSAQV---VDEQVYPHVATGFADT--SAFLREMTLKSMLVLAPKLS 443 (778)
Q Consensus 371 ~~i~P~i~~lF~~~--Dr~iR~~LL~~l~~~~~~l~~~~---v~~~I~P~l~~gf~Dt--~~~iRe~tlksi~~l~pkL~ 443 (778)
..++|.++.++.+. |..+|...|.-|..+.+.+..+. .-+.|++.+..++.|. ++.||..+++++..+++.+.
T Consensus 127 ~~ll~~L~~~l~~~~~~~~~r~~al~~l~~l~~~~~~~~~~~~~~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~~~~~ 206 (462)
T 1ibr_B 127 PELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTK 206 (462)
T ss_dssp TTHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSCGGGTGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHTTTTH
T ss_pred HHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHhCCchhhHhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 56899999999988 89999999999988888764332 2345899999999999 79999999999998877664
Q ss_pred hhh----HhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccc--hh-hhHHHHHhhhhcCCCchhhhhee
Q 004025 444 QRT----ISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTR--KR-VLINAFTVRALRDTFSPARGAAK 511 (778)
Q Consensus 444 ~~~----l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~--~~-vL~~af~~~~lkD~f~~~R~A~l 511 (778)
... ..+.+++.|.++..|+++.+|...+-||+.|+......-+ -. -+++.+. ..++|.....|..++
T Consensus 207 ~~~~~~~~~~~l~~~l~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~v~~~a~ 280 (462)
T 1ibr_B 207 ANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITI-EAMKSDIDEVALQGI 280 (462)
T ss_dssp HHHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCGGGCTTTTTTTHHHHHH-HHHHCSSHHHHHHHH
T ss_pred HhhhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCchHHHHHHH
Confidence 322 2345788888888888999999999999999987654221 11 4566665 677776544444443
|
| >1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A | Back alignment and structure |
|---|
Probab=97.97 E-value=8.6e-05 Score=93.75 Aligned_cols=231 Identities=15% Similarity=0.112 Sum_probs=154.5
Q ss_pred hHHhhhcccCChhhHhHhhhhchhhhcC----CChhhhhhchHHHHHHHHhhCCCC--chhhHHHHHhccCCChhhhhhh
Q 004025 299 IHFMEILNLKDSVEKDTFFRKLPNLAEQ----LPRQIVLKKLLPLLASALEFGSAA--APALTALLKMGSWLSTEEFSVK 372 (778)
Q Consensus 299 ~~~Le~l~~k~~~EK~~F~~~L~~~l~~----fp~~~~~~kILP~Ll~~~~~~~~~--~~~L~~llki~~~l~~eef~~~ 372 (778)
...|+.+.-.|++.|..-...|.+.+.. +.+ -...++++.|++.+...+.. ..++..+-.++..++. .+...
T Consensus 9 ~~lL~~l~s~d~~~R~~A~~~L~~~l~~~~~~~~~-~~~~~il~~Ll~~L~d~~~~vR~~A~~~L~~l~~~~~~-~~~~~ 86 (1230)
T 1u6g_C 9 SNLLEKMTSSDKDFRFMATNDLMTELQKDSIKLDD-DSERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKVKE-YQVET 86 (1230)
T ss_dssp HHHHHHTTCSSHHHHHHHHHHHHHHTSSSCCSCCT-THHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHTTSCH-HHHHH
T ss_pred HHHHHhcCCCCHhHHHHHHHHHHHHHcccccCCCh-hHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhCCH-HHHHH
Confidence 3455555556666666444444443321 111 22347888898887643211 1123334455556655 66678
Q ss_pred hHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhh--------hhhcchHHHHhhcCC-CcHHHHHHHHHHHHhhhccCC
Q 004025 373 VLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQV--------VDEQVYPHVATGFAD-TSAFLREMTLKSMLVLAPKLS 443 (778)
Q Consensus 373 i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~--------v~~~I~P~l~~gf~D-t~~~iRe~tlksi~~l~pkL~ 443 (778)
|++.+...+.+.+..+|.....-|..++..++... .-..++|.++.++.| .+..+|+.++..+..++....
T Consensus 87 i~~~Ll~~l~d~~~~vR~~a~~~L~~i~~~l~~~~~~~~~~~~~~~~llp~L~~~l~~~~~~~~~~~al~~l~~~~~~~~ 166 (1230)
T 1u6g_C 87 IVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQG 166 (1230)
T ss_dssp HHHHHHHHTTCSSSHHHHHHHHHHHHHHHHCC-----CCTHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHhCCCcccccchHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhH
Confidence 99999999999999999999999999999998762 456799999999995 889999999999998884332
Q ss_pred hh--hHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCC-chhhhheeee-------
Q 004025 444 QR--TISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTF-SPARGAAKIL------- 513 (778)
Q Consensus 444 ~~--~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f-~~~R~A~l~a------- 513 (778)
.. ....++++.|.....|+++.||..++.||+.++..++...... +++.+. ..|++.. ...|.+++.+
T Consensus 167 ~~l~~~~~~ll~~l~~~L~~~~~~vR~~a~~al~~l~~~~~~~~~~~-~l~~l~-~~L~~~~~~~~r~~a~~~l~~l~~~ 244 (1230)
T 1u6g_C 167 GLLVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGNIVFVD-LIEHLL-SELSKNDSMSTTRTYIQCIAAISRQ 244 (1230)
T ss_dssp SSCTTTHHHHHHHHGGGGGCSSHHHHHHHHHHHHHHTTTC----CTT-HHHHHH-HHHHHTCSSCSCTTHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhcCHHHHHH-HHHHHH-HHhccCCchhHHHHHHHHHHHHHHH
Confidence 21 1247888888888889999999999999999999988765443 455555 5565442 3556555554
Q ss_pred ------cc--------------CCHHHHHHHHHHHHHHHH
Q 004025 514 ------SY--------------LNCDVRSKAFQAVDQFLQ 533 (778)
Q Consensus 514 ------~~--------------~~~~VR~~a~~~~~~~l~ 533 (778)
.| .+..||+.|..++..+..
T Consensus 245 ~~~~~~~~l~~l~~~ll~~l~d~~~~vR~~a~~~l~~l~~ 284 (1230)
T 1u6g_C 245 AGHRIGEYLEKIIPLVVKFCNVDDDELREYCIQAFESFVR 284 (1230)
T ss_dssp SSGGGTTSCTTHHHHHHHHHSSCCTTTHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 01 556677777777766654
|
| >4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A | Back alignment and structure |
|---|
Probab=97.96 E-value=2.1e-05 Score=78.05 Aligned_cols=143 Identities=18% Similarity=0.144 Sum_probs=107.0
Q ss_pred hhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcC---hhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCCh-
Q 004025 369 FSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFS---AQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQ- 444 (778)
Q Consensus 369 f~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~---~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~- 444 (778)
+.....|.+++|+.+.|..+|...+.-|..+...-+ ...+...++|.++..+.+.++.+|+.++.++-.++..-.+
T Consensus 9 ~~~~~~~~l~~LL~s~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~ 88 (210)
T 4db6_A 9 HHGSELPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQ 88 (210)
T ss_dssp ----CHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHH
T ss_pred cccchhHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcHH
Confidence 445567889999999999999888888877764322 3355667899999999999999999999999888743221
Q ss_pred --hhHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccc----hhhhHHHHHhhhhcCCCchhhhheeee
Q 004025 445 --RTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTR----KRVLINAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 445 --~~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~----~~vL~~af~~~~lkD~f~~~R~A~l~a 513 (778)
..+....++.|.++..++++.+|.+++-+|+.|+..-. +.+ ..=+++.+. +.|+++....|..++.+
T Consensus 89 ~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~-~~~~~~~~~~~i~~L~-~ll~~~~~~v~~~a~~a 161 (210)
T 4db6_A 89 IQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGN-EQIQAVIDAGALPALV-QLLSSPNEQILQEALWA 161 (210)
T ss_dssp HHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCH-HHHHHHHHTTHHHHHH-HHTTCSCHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHcCCH-HHHHHHHHcCcHHHHH-HHHcCCCHHHHHHHHHH
Confidence 23344578888888888889999999999999986422 222 222578888 89999888888888877
|
| >2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A | Back alignment and structure |
|---|
Probab=97.92 E-value=6.9e-05 Score=90.28 Aligned_cols=203 Identities=13% Similarity=0.112 Sum_probs=140.8
Q ss_pred CChhhHhHhhhhchhhhcCCChhhhhh---chHHHHHHHHhhCCC--CchhhHHHHHhccCCC-----------------
Q 004025 308 KDSVEKDTFFRKLPNLAEQLPRQIVLK---KLLPLLASALEFGSA--AAPALTALLKMGSWLS----------------- 365 (778)
Q Consensus 308 k~~~EK~~F~~~L~~~l~~fp~~~~~~---kILP~Ll~~~~~~~~--~~~~L~~llki~~~l~----------------- 365 (778)
.+...|..-++.|..+....|..+..+ .|++.++..+..... ...++.-+-.++....
T Consensus 236 ~~~~~r~~a~~~l~~l~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 315 (861)
T 2bpt_A 236 EDIEVQAAAFGCLCKIMSKYYTFMKPYMEQALYALTIATMKSPNDKVASMTVEFWSTICEEEIDIAYELAQFPQSPLQSY 315 (861)
T ss_dssp SCHHHHHHHHHHHHHHHHHHGGGCHHHHHHTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSCCCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhhH
Confidence 455566667777777766666544322 566666665543321 0111222222222110
Q ss_pred --hhhhhhhhHHHHHHhhcCC-------hHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHH
Q 004025 366 --TEEFSVKVLPTIVKLFASN-------DRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSML 436 (778)
Q Consensus 366 --~eef~~~i~P~i~~lF~~~-------Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~ 436 (778)
...+...++|.++..+... +..+|....+-|..+...++... -..++|.+...+.+.+..+|+.++.++-
T Consensus 316 ~~~~~~~~~il~~ll~~l~~~~~d~~d~~~~~r~~a~~~L~~l~~~~~~~~-~~~l~~~l~~~l~~~~~~~r~~a~~~l~ 394 (861)
T 2bpt_A 316 NFALSSIKDVVPNLLNLLTRQNEDPEDDDWNVSMSAGACLQLFAQNCGNHI-LEPVLEFVEQNITADNWRNREAAVMAFG 394 (861)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCCCC-CCCCCHHHHHHHHHHHHHHHHHGGGG-HHHHHHHHHHHTTCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHHHHHccHhH-HHHHHHHHHHHcCCCChhHHHHHHHHHH
Confidence 1224467888888887643 35899999999999999888554 4579999999999999999999999999
Q ss_pred hhhccCChhhH---hHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccc----cchhhhHHHHHhhhhcCCCchhhhh
Q 004025 437 VLAPKLSQRTI---SGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEG----TRKRVLINAFTVRALRDTFSPARGA 509 (778)
Q Consensus 437 ~l~pkL~~~~l---~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~----~~~~vL~~af~~~~lkD~f~~~R~A 509 (778)
.++.....+.+ ...+++.|.+...|+.+.||..++.|||+++..+... .--.-+++++. +.|+|+ +..|.+
T Consensus 395 ~i~~~~~~~~~~~~l~~il~~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~~l~~l~-~~l~~~-~~v~~~ 472 (861)
T 2bpt_A 395 SIMDGPDKVQRTYYVHQALPSILNLMNDQSLQVKETTAWCIGRIADSVAESIDPQQHLPGVVQACL-IGLQDH-PKVATN 472 (861)
T ss_dssp HTSSSSCHHHHHHHHHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHGGGSCTTTTHHHHHHHHH-HHHTSC-HHHHHH
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHH-HHhccC-hHHHHH
Confidence 99977653322 3568888888889999999999999999999998653 23445678888 889998 777776
Q ss_pred eeee
Q 004025 510 AKIL 513 (778)
Q Consensus 510 ~l~a 513 (778)
+..+
T Consensus 473 a~~a 476 (861)
T 2bpt_A 473 CSWT 476 (861)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6544
|
| >2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A | Back alignment and structure |
|---|
Probab=97.89 E-value=0.00015 Score=80.32 Aligned_cols=226 Identities=12% Similarity=0.107 Sum_probs=155.6
Q ss_pred cccCChhhHhHhhhhchhhhc--CCC--hhhhhh-chHHHHHHHHhhCCCCc---hhhHHHHHhccCCCh---hhhhhhh
Q 004025 305 LNLKDSVEKDTFFRKLPNLAE--QLP--RQIVLK-KLLPLLASALEFGSAAA---PALTALLKMGSWLST---EEFSVKV 373 (778)
Q Consensus 305 l~~k~~~EK~~F~~~L~~~l~--~fp--~~~~~~-kILP~Ll~~~~~~~~~~---~~L~~llki~~~l~~---eef~~~i 373 (778)
+.-.+...+..-...|.+++. .-| ..+... .++|.|++.+....... .++..+-.++..-+. .-....+
T Consensus 29 l~s~~~~~r~~A~~~L~~l~~~~~~~~~~~~~~~~~~i~~L~~~L~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~ 108 (450)
T 2jdq_A 29 IFSKSPEQQLSATQKFRKLLSKEPNPPIDEVISTPGVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIVIQAGA 108 (450)
T ss_dssp HHSSCHHHHHHHHHHHHHHHHSSSSCCHHHHHTSTTHHHHHHHHHTCTTCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTH
T ss_pred hcCCCHHHHHHHHHHHHHHhcCCCCCcHHHHHHcCCcHHHHHHHHCCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHhCCC
Confidence 334556666666666666543 112 233444 78999999887652111 122223333332111 1223568
Q ss_pred HHHHHHhhcCChHHHHHHHHHhHHHHHhhcC---hhhhhhcchHHHHhhcCC-CcHHHHHHHHHHHHhhh----ccCChh
Q 004025 374 LPTIVKLFASNDRAIRVALLQHIDQYGQSFS---AQVVDEQVYPHVATGFAD-TSAFLREMTLKSMLVLA----PKLSQR 445 (778)
Q Consensus 374 ~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~---~~~v~~~I~P~l~~gf~D-t~~~iRe~tlksi~~l~----pkL~~~ 445 (778)
+|.+++++.+++..+|...+.-|..+...-+ ...+...++|.++..+.+ .+..+|+.++.++..++ |.....
T Consensus 109 i~~L~~lL~~~~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~ 188 (450)
T 2jdq_A 109 VPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEFA 188 (450)
T ss_dssp HHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTTSCCCHHHHHHHHHHHHHHHCCSSSCCCGG
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHccCCHHHHHHHHHCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCCCCCCHH
Confidence 9999999999999999888888877776432 334556799999999995 78999999999999998 444444
Q ss_pred hHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccc---cchhhhHHHHHhhhhcCCCchhhhheeee--cc-----
Q 004025 446 TISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEG---TRKRVLINAFTVRALRDTFSPARGAAKIL--SY----- 515 (778)
Q Consensus 446 ~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~---~~~~vL~~af~~~~lkD~f~~~R~A~l~a--~~----- 515 (778)
.+ ..++|.|.++..++++.+|.+++-+|+.|+..-... ....-+++.+. +.|+|+.+..|.+++.+ ..
T Consensus 189 ~~-~~~l~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~-~ll~~~~~~v~~~a~~~L~~l~~~~~ 266 (450)
T 2jdq_A 189 KV-SPCLNVLSWLLFVSDTDVLADACWALSYLSDGPNDKIQAVIDAGVCRRLV-ELLMHNDYKVVSPALRAVGNIVTGDD 266 (450)
T ss_dssp GT-GGGHHHHHHHTTCCCHHHHHHHHHHHHHHTSSSHHHHHHHHHTTTHHHHH-HHTTCSCHHHHHHHHHHHHHHTTSCH
T ss_pred HH-HHHHHHHHHHHccCCHHHHHHHHHHHHHHHCCCcHHHHHHHHcCcHHHHH-HHHCCCchhHHHHHHHHHHHHhhCCh
Confidence 43 678888888888888999999999999999754321 11223678888 89999999999888877 00
Q ss_pred ---------------------CCHHHHHHHHHHHHHHH
Q 004025 516 ---------------------LNCDVRSKAFQAVDQFL 532 (778)
Q Consensus 516 ---------------------~~~~VR~~a~~~~~~~l 532 (778)
.+..||..|..++..+.
T Consensus 267 ~~~~~~~~~~~l~~L~~ll~~~~~~vr~~a~~~L~~l~ 304 (450)
T 2jdq_A 267 IQTQVILNCSALQSLLHLLSSPKESIKKEACWTISNIT 304 (450)
T ss_dssp HHHHHHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCccHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 56677777777765554
|
| >2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A | Back alignment and structure |
|---|
Probab=97.87 E-value=0.00014 Score=80.54 Aligned_cols=228 Identities=14% Similarity=0.101 Sum_probs=158.4
Q ss_pred ChhhHhHhhhhchhhhcCCC---hhhhhhchHHHHHHHHhhCCCC---chhhHHHHHhccCC---ChhhhhhhhHHHHHH
Q 004025 309 DSVEKDTFFRKLPNLAEQLP---RQIVLKKLLPLLASALEFGSAA---APALTALLKMGSWL---STEEFSVKVLPTIVK 379 (778)
Q Consensus 309 ~~~EK~~F~~~L~~~l~~fp---~~~~~~kILP~Ll~~~~~~~~~---~~~L~~llki~~~l---~~eef~~~i~P~i~~ 379 (778)
++.-+..-..-|..+....+ ..+....++|.|++.+...... ..++..+-.++... ....+...++|.+++
T Consensus 120 ~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~ 199 (450)
T 2jdq_A 120 FEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEFAKVSPCLNVLSW 199 (450)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTTSCCCHHHHHHHHHHHHHHHCCSSSCCCGGGTGGGHHHHHH
T ss_pred CHHHHHHHHHHHHHHccCCHHHHHHHHHCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHH
Confidence 34444444444444443322 2244456889999888742211 12233333444322 223455788999999
Q ss_pred hhcCChHHHHHHHHHhHHHHHhhcC---hhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChh---hHhHHHHH
Q 004025 380 LFASNDRAIRVALLQHIDQYGQSFS---AQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQR---TISGSLLK 453 (778)
Q Consensus 380 lF~~~Dr~iR~~LL~~l~~~~~~l~---~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~---~l~~~LL~ 453 (778)
++...|..+|...+.-|..+....+ ...+...++|.++..+.+.++.+|+.++.++..++..-+.. .+...+++
T Consensus 200 ~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~ 279 (450)
T 2jdq_A 200 LLFVSDTDVLADACWALSYLSDGPNDKIQAVIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQVILNCSALQ 279 (450)
T ss_dssp HTTCCCHHHHHHHHHHHHHHTSSSHHHHHHHHHTTTHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHTTTHHH
T ss_pred HHccCCHHHHHHHHHHHHHHHCCCcHHHHHHHHcCcHHHHHHHHCCCchhHHHHHHHHHHHHhhCChHHHHHHHHCccHH
Confidence 9999999999888777777765432 23445679999999999999999999999999888654332 23446889
Q ss_pred HHHhhccCCCCcchhhHHHHHHHhhhhcccccch----hhhHHHHHhhhhcCCCchhhhheeee------c-------c-
Q 004025 454 YLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRK----RVLINAFTVRALRDTFSPARGAAKIL------S-------Y- 515 (778)
Q Consensus 454 ~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~----~vL~~af~~~~lkD~f~~~R~A~l~a------~-------~- 515 (778)
.|.++..++.+.||..++.+|+.|+..-. ..++ .-+++.+. +.|+|+....|.+|+.+ . +
T Consensus 280 ~L~~ll~~~~~~vr~~a~~~L~~l~~~~~-~~~~~~~~~~~l~~L~-~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~l 357 (450)
T 2jdq_A 280 SLLHLLSSPKESIKKEACWTISNITAGNR-AQIQTVIDANIFPALI-SILQTAEFRTRKEAAWAITNATSGGSAEQIKYL 357 (450)
T ss_dssp HHHHHTTCSSHHHHHHHHHHHHHHTTSCH-HHHHHHHHTTHHHHHH-HHHHHSCHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHcCCH-HHHHHHHHCCCHHHHH-HHHhcCCHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 99999888899999999999999996322 2222 23577888 89999999999887766 0 0
Q ss_pred ---------------CCHHHHHHHHHHHHHHHHHHHHH
Q 004025 516 ---------------LNCDVRSKAFQAVDQFLQIVKQY 538 (778)
Q Consensus 516 ---------------~~~~VR~~a~~~~~~~l~~l~~~ 538 (778)
.+..||..|..++..++..-+..
T Consensus 358 ~~~~~i~~L~~ll~~~~~~v~~~a~~aL~~l~~~~~~~ 395 (450)
T 2jdq_A 358 VELGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQE 395 (450)
T ss_dssp HHHTCHHHHHHGGGSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHhchhh
Confidence 67899999999999888766544
|
| >1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16 | Back alignment and structure |
|---|
Probab=97.82 E-value=0.00012 Score=76.32 Aligned_cols=126 Identities=9% Similarity=0.070 Sum_probs=51.9
Q ss_pred HHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHHHH
Q 004025 374 LPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLK 453 (778)
Q Consensus 374 ~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~LL~ 453 (778)
++.++.++.++|..+|...+..|..+. ...++|.+...+.|.++.+|..++.++..+... ... ...+++
T Consensus 25 i~~L~~~L~~~~~~vr~~A~~~L~~~~--------~~~~~~~L~~~l~d~~~~vR~~A~~aL~~l~~~--~~~-~~~l~~ 93 (280)
T 1oyz_A 25 DDELFRLLDDHNSLKRISSARVLQLRG--------GQDAVRLAIEFCSDKNYIRRDIGAFILGQIKIC--KKC-EDNVFN 93 (280)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHHC--------CHHHHHHHHHHHTCSSHHHHHHHHHHHHHSCCC--TTT-HHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHccC--------CchHHHHHHHHHcCCCHHHHHHHHHHHHHhccc--ccc-chHHHH
Confidence 344444444444455544444443332 112344444445555555555444444333210 011 122333
Q ss_pred HHHh-hccCCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhhheeee
Q 004025 454 YLSK-LQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 454 ~lak-lq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~l~a 513 (778)
.|.+ +..|+++.||.+++-+|+++...... ...-+++.+. +.|+|+.+..|.+++.+
T Consensus 94 ~L~~~~~~d~~~~vr~~a~~aL~~l~~~~~~--~~~~~~~~L~-~~l~d~~~~vR~~a~~a 151 (280)
T 1oyz_A 94 ILNNMALNDKSACVRATAIESTAQRCKKNPI--YSPKIVEQSQ-ITAFDKSTNVRRATAFA 151 (280)
T ss_dssp HHHHHHHHCSCHHHHHHHHHHHHHHHHHCGG--GHHHHHHHHH-HHTTCSCHHHHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHhccCCc--ccHHHHHHHH-HHhhCCCHHHHHHHHHH
Confidence 3332 23344444555555555554432110 0112344444 44455554444444444
|
| >4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} | Back alignment and structure |
|---|
Probab=97.76 E-value=0.0001 Score=75.12 Aligned_cols=208 Identities=18% Similarity=0.178 Sum_probs=139.4
Q ss_pred HhhhcccCChhhHhHhhhhchhhhcCC---ChhhhhhchHHHHHHHHhhCCCCchh----hHHHHHhccCCCh--h-hhh
Q 004025 301 FMEILNLKDSVEKDTFFRKLPNLAEQL---PRQIVLKKLLPLLASALEFGSAAAPA----LTALLKMGSWLST--E-EFS 370 (778)
Q Consensus 301 ~Le~l~~k~~~EK~~F~~~L~~~l~~f---p~~~~~~kILP~Ll~~~~~~~~~~~~----L~~llki~~~l~~--e-ef~ 370 (778)
+.+.+.-.+.+.+..-...|...+..- -..+....++|.|++.+.... ..+ +..+-.++..-+. + -..
T Consensus 17 ~~~~L~s~~~~~~~~a~~~L~~~l~~~~~~~~~~~~~g~i~~L~~lL~~~~--~~v~~~a~~~L~~l~~~~~~~~~~i~~ 94 (252)
T 4db8_A 17 MTQQLNSDDMQEQLSATRKFSQILSDGNEQIQAVIDAGALPALVQLLSSPN--EQILQEALWALSNIASGGNEQIQAVID 94 (252)
T ss_dssp HHHHHHSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHGGGCSC--HHHHHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHcCCCchHHHHHHcCcHHHHHHHHcCCC--HHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 344455566666666555554443321 123566678999999888654 222 2222233321111 1 123
Q ss_pred hhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcCh---hhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChh--
Q 004025 371 VKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSA---QVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQR-- 445 (778)
Q Consensus 371 ~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~---~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~-- 445 (778)
..++|.++.++.+.+..+|...+.-|..+...-+. ..+...++|.++..+.+.++.+|+.++.++..++..-.+.
T Consensus 95 ~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~ 174 (252)
T 4db8_A 95 AGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQ 174 (252)
T ss_dssp TTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred cCCHHHHHHHHcCCCHHHHHHHHHHHHHhhcCCchHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHH
Confidence 34789999999999999998777777777655432 3556679999999999999999999999999988543222
Q ss_pred -hHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchh----hhHHHHHhhhhcCCCchhhhheee
Q 004025 446 -TISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKR----VLINAFTVRALRDTFSPARGAAKI 512 (778)
Q Consensus 446 -~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~----vL~~af~~~~lkD~f~~~R~A~l~ 512 (778)
.+...+++.|.++..++++.+|.+++-+|+.|+.. +++.++. =.++.+. +.++++....|..|+.
T Consensus 175 ~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~-~~~~~~~~~~~g~i~~L~-~ll~~~~~~v~~~A~~ 244 (252)
T 4db8_A 175 AVIDAGALPALVQLLSSPNEQILQEALWALSNIASG-GNEQKQAVKEAGALEKLE-QLQSHENEKIQKEAQE 244 (252)
T ss_dssp HHHHTTCHHHHHHGGGCSSHHHHHHHHHHHHHHTTS-CHHHHHHHHHTTHHHHHH-TTTTCSSSHHHHTHHH
T ss_pred HHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHhcC-CHHHHHHHHHCCcHHHHH-HHhCCCCHHHHHHHHH
Confidence 23456788899988888999999999999999853 2222222 2466677 7888877666666554
|
| >4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene} | Back alignment and structure |
|---|
Probab=97.75 E-value=0.00027 Score=71.47 Aligned_cols=180 Identities=17% Similarity=0.163 Sum_probs=121.4
Q ss_pred hhhhchHHHHHHHHhhCCCC--chhhHHHHHhccCCC---hhhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhh---
Q 004025 331 IVLKKLLPLLASALEFGSAA--APALTALLKMGSWLS---TEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQS--- 402 (778)
Q Consensus 331 ~~~~kILP~Ll~~~~~~~~~--~~~L~~llki~~~l~---~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~--- 402 (778)
+....++|.|++.+...+.. ..++..+-.++..-. ..-....++|.++.++.+.+..+|...+.-|..+...
T Consensus 40 ~~~~g~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~l~~ll~~~~~~v~~~a~~~L~~l~~~~~~ 119 (252)
T 4hxt_A 40 IVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDE 119 (252)
T ss_dssp HHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHH
T ss_pred HHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHH
Confidence 34456788888888765411 111222233333211 1112335799999999999999998777777777643
Q ss_pred cChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCCh---hhHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhh
Q 004025 403 FSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQ---RTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIAS 479 (778)
Q Consensus 403 l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~---~~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~ 479 (778)
.-...+...++|.++..+.+.++.+|+.++.++-.++..-.. ..+...+++.|..+..++++.+|.+++-||+.|+.
T Consensus 120 ~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~ 199 (252)
T 4hxt_A 120 AIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIAS 199 (252)
T ss_dssp HHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCcCHHHHHHHHCCCCHHHHHHHHHHHHHHHc
Confidence 223355667899999999999999999999999998864322 23445688999998889899999999999999997
Q ss_pred hcccccchhh----hHHHHHhhhhcCCCchhhhheee
Q 004025 480 HLNEGTRKRV----LINAFTVRALRDTFSPARGAAKI 512 (778)
Q Consensus 480 ~L~~~~~~~v----L~~af~~~~lkD~f~~~R~A~l~ 512 (778)
. +++.++.+ +++.+. +.++++....|..|+.
T Consensus 200 ~-~~~~~~~l~~~~~i~~L~-~ll~~~~~~v~~~a~~ 234 (252)
T 4hxt_A 200 G-PTSAIKAIVDAGGVEVLQ-KLLTSTDSEVQKEAQR 234 (252)
T ss_dssp S-BHHHHHHHHHTTHHHHHH-HGGGCSCHHHHHHHHH
T ss_pred C-CHHHHHHHHHCCCHHHHH-HHHCCCcHHHHHHHHH
Confidence 3 23333322 356666 6777665444444433
|
| >1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00023 Score=81.39 Aligned_cols=206 Identities=14% Similarity=0.115 Sum_probs=150.5
Q ss_pred hhhhchHHHHHHHHhhCCC--CchhhHHHHHhccC---CChhhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcC-
Q 004025 331 IVLKKLLPLLASALEFGSA--AAPALTALLKMGSW---LSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFS- 404 (778)
Q Consensus 331 ~~~~kILP~Ll~~~~~~~~--~~~~L~~llki~~~---l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~- 404 (778)
+....++|.|+..+..... ...++..+..++.. .....+...++|.++.++...|..+|...+.-|..+...-+
T Consensus 211 ~~~~~~l~~L~~ll~~~~~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~l~~L~~lL~~~d~~v~~~a~~~L~~L~~~~~~ 290 (530)
T 1wa5_B 211 VLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQE 290 (530)
T ss_dssp HHHTTCHHHHHHGGGSCCHHHHHHHHHHHHHHHCCSSSCCCHHHHGGGHHHHHHHTTCCCHHHHHHHHHHHHHHHSSCHH
T ss_pred HHHcCcHHHHHHHhccCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHhHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCHH
Confidence 4455688889888875321 11122333344432 22344567899999999999999999888887777775432
Q ss_pred --hhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCCh---hhHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhh
Q 004025 405 --AQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQ---RTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIAS 479 (778)
Q Consensus 405 --~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~---~~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~ 479 (778)
...+...++|.++..+.+.+..+|+.++.++..++..-+. ..+...+++.|..+..++.+.||..++.+|+.|+.
T Consensus 291 ~~~~~~~~~~v~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~lL~~~~~~vr~~A~~aL~~l~~ 370 (530)
T 1wa5_B 291 AIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITA 370 (530)
T ss_dssp HHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhcCcHHHHHHHHCCCChhhHHHHHHHHHHHHcCCHHHHHHHHHcchHHHHHHHHcCCCHHHHHHHHHHHHHHHc
Confidence 2345568999999999999999999999999988853322 23445788999998888899999999999999996
Q ss_pred hcccccch----hhhHHHHHhhhhcCCCchhhhheeee---------c---c-------------------CCHHHHHHH
Q 004025 480 HLNEGTRK----RVLINAFTVRALRDTFSPARGAAKIL---------S---Y-------------------LNCDVRSKA 524 (778)
Q Consensus 480 ~L~~~~~~----~vL~~af~~~~lkD~f~~~R~A~l~a---------~---~-------------------~~~~VR~~a 524 (778)
.- ...++ .-+++.+. +.|+++....|.+|+.+ . + .+..||..|
T Consensus 371 ~~-~~~~~~~~~~~~l~~L~-~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~l~~~~~l~~L~~ll~~~~~~v~~~a 448 (530)
T 1wa5_B 371 GN-TEQIQAVIDANLIPPLV-KLLEVAEYKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVT 448 (530)
T ss_dssp SC-HHHHHHHHHTTCHHHHH-HHHHHSCHHHHHHHHHHHHHHHHHTTTCTHHHHHHHHTTCHHHHHHHTTTCCHHHHHHH
T ss_pred CC-HHHHHHHHHCCCHHHHH-HHHhcCCHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHCCCHHHHHHHHhCCCHHHHHHH
Confidence 42 22222 23577888 88999888888887766 1 0 678899999
Q ss_pred HHHHHHHHHHHHHH
Q 004025 525 FQAVDQFLQIVKQY 538 (778)
Q Consensus 525 ~~~~~~~l~~l~~~ 538 (778)
..++..++..-++.
T Consensus 449 l~aL~~l~~~~~~~ 462 (530)
T 1wa5_B 449 LDALENILKMGEAD 462 (530)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhh
Confidence 99999998876654
|
| >1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00034 Score=79.86 Aligned_cols=225 Identities=12% Similarity=0.123 Sum_probs=154.7
Q ss_pred ccCChhhHhHhhhhchhhhcCC--C--hhhhhhchHHHHHHHHhhCCCCc---hhhHHHHHhccCCCh---hhhhhhhHH
Q 004025 306 NLKDSVEKDTFFRKLPNLAEQL--P--RQIVLKKLLPLLASALEFGSAAA---PALTALLKMGSWLST---EEFSVKVLP 375 (778)
Q Consensus 306 ~~k~~~EK~~F~~~L~~~l~~f--p--~~~~~~kILP~Ll~~~~~~~~~~---~~L~~llki~~~l~~---eef~~~i~P 375 (778)
.-.+++.+..-...|.+++... | ..+....++|.|++.+....... .++..+-.|+..-+. .-....++|
T Consensus 97 ~s~~~~~~~~A~~~L~~ll~~~~~~~~~~~~~~g~i~~Lv~~L~~~~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~ 176 (530)
T 1wa5_B 97 NSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVP 176 (530)
T ss_dssp SCSSHHHHHHHHHHHHHHTCCSSSCSHHHHHHTTCHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHH
T ss_pred cCCCHHHHHHHHHHHHHHhCCCCCccHHHHHHCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCCHH
Confidence 3344555555555555554432 2 24556678999999887642111 122233344432211 112345789
Q ss_pred HHHHhhcCChHHHHHHHHHhHHHHHhh---cChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhh----ccCChhhHh
Q 004025 376 TIVKLFASNDRAIRVALLQHIDQYGQS---FSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLA----PKLSQRTIS 448 (778)
Q Consensus 376 ~i~~lF~~~Dr~iR~~LL~~l~~~~~~---l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~----pkL~~~~l~ 448 (778)
.++.++.+.+..+|...+.-|..+... .....+...++|.++..+.+.+..+|..++.++..++ +.... .+.
T Consensus 177 ~Lv~lL~~~~~~vr~~A~~aL~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~~~~v~~~a~~~L~~L~~~~~~~~~~-~~~ 255 (530)
T 1wa5_B 177 LFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDW-SVV 255 (530)
T ss_dssp HHHHHHHHCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHGGGSCCHHHHHHHHHHHHHHHCCSSSCCCH-HHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHhCCCccchHHHHHcCcHHHHHHHhccCCHHHHHHHHHHHHHHhCCCCCCCcH-HHH
Confidence 999999999999998888888777753 2334466679999999999999999999999999988 44443 334
Q ss_pred HHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccc---cchhhhHHHHHhhhhcCCCchhhhheeee----cc------
Q 004025 449 GSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEG---TRKRVLINAFTVRALRDTFSPARGAAKIL----SY------ 515 (778)
Q Consensus 449 ~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~---~~~~vL~~af~~~~lkD~f~~~R~A~l~a----~~------ 515 (778)
..+++.|.++..++++.||.+++.||+.|+..-... ....-+++.+. ..|+|+.+..|.+++.+ ..
T Consensus 256 ~~~l~~L~~lL~~~d~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~v~~Lv-~lL~~~~~~v~~~a~~~L~~l~~~~~~~~ 334 (530)
T 1wa5_B 256 SQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLV-ELLSHESTLVQTPALRAVGNIVTGNDLQT 334 (530)
T ss_dssp GGGHHHHHHHTTCCCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHH-HGGGCSCHHHHHHHHHHHHHHTTSCHHHH
T ss_pred HhHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHhcCcHHHHH-HHHCCCChhhHHHHHHHHHHHHcCCHHHH
Confidence 678899999988889999999999999999653221 11223578888 89999999999888777 10
Q ss_pred ------------------CCHHHHHHHHHHHHHHH
Q 004025 516 ------------------LNCDVRSKAFQAVDQFL 532 (778)
Q Consensus 516 ------------------~~~~VR~~a~~~~~~~l 532 (778)
.+..||..|..++..+.
T Consensus 335 ~~~~~~~~l~~L~~lL~~~~~~vr~~A~~aL~~l~ 369 (530)
T 1wa5_B 335 QVVINAGVLPALRLLLSSPKENIKKEACWTISNIT 369 (530)
T ss_dssp HHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHT
T ss_pred HHHHHcchHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 56777877777766654
|
| >1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00073 Score=81.40 Aligned_cols=226 Identities=11% Similarity=0.091 Sum_probs=151.1
Q ss_pred ChhhHhHhhhhchhhhcCCChhh---hhhchHHHHHHHHhhCCCCc----hhhHHHHHhccCC----ChhhhhhhhHHHH
Q 004025 309 DSVEKDTFFRKLPNLAEQLPRQI---VLKKLLPLLASALEFGSAAA----PALTALLKMGSWL----STEEFSVKVLPTI 377 (778)
Q Consensus 309 ~~~EK~~F~~~L~~~l~~fp~~~---~~~kILP~Ll~~~~~~~~~~----~~L~~llki~~~l----~~eef~~~i~P~i 377 (778)
+..-|..-++.|..+.+.+.++. ....++|.|.+.+....... .++..+-.+...+ ..+.+...+++.+
T Consensus 143 ~~~~r~~al~~l~~l~~~~~~~~~~~~~~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~il~~l 222 (876)
T 1qgr_A 143 TEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVV 222 (876)
T ss_dssp CHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHSTTCSCHHHHHHHHHHHHHHGGGCHHHHTSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCHhhHHhHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 34445555555555554443221 12346666776665542111 1222232332222 2233445688888
Q ss_pred HHhhcCChHHHHHHHHHhHHHHHhhcChh---hhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCC-----------
Q 004025 378 VKLFASNDRAIRVALLQHIDQYGQSFSAQ---VVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLS----------- 443 (778)
Q Consensus 378 ~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~---~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~----------- 443 (778)
..+....|..+|...++.|..++...++. .+...|++.++.++.|.++.+|..++..+..++....
T Consensus 223 ~~~~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~al~~l~~l~~~~~~~~~~~~~~~~ 302 (876)
T 1qgr_A 223 CEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAE 302 (876)
T ss_dssp HHHTTCSSHHHHHHHHHHHHHHHHHSGGGCHHHHTTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHhHhhhhccccc
Confidence 88888888999999999999888776543 3444799999999999999999999988777664320
Q ss_pred ---------hhh---HhHHHHHHHHhhcc-------CCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCc
Q 004025 444 ---------QRT---ISGSLLKYLSKLQV-------DEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFS 504 (778)
Q Consensus 444 ---------~~~---l~~~LL~~laklq~-------D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~ 504 (778)
... ....+++.+.++.. |++..+|..+..||+.|+..+++.. -..+++.+. ..++|+.|
T Consensus 303 ~~~~~~~~~~~~~~~~~~~ll~~ll~~l~~~~~d~~~~~~~~r~~a~~~l~~l~~~~~~~~-~~~~l~~l~-~~l~~~~~ 380 (876)
T 1qgr_A 303 QGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDI-VPHVLPFIK-EHIKNPDW 380 (876)
T ss_dssp HSSCCSSCCCCHHHHHHHHHHHHHHHHTTCCCSSCCTTCCCHHHHHHHHHHHHHHHHGGGG-HHHHHHHHH-HHTTCSSH
T ss_pred cCCCccchhHHHHHHHHHHHhHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHCcHhh-HHHHHHHHH-HHccCCCh
Confidence 011 12456665544432 3467899999999999999998544 445677777 89999999
Q ss_pred hhhhheeee--------c------c--------------CCHHHHHHHHHHHHHHHHHHH
Q 004025 505 PARGAAKIL--------S------Y--------------LNCDVRSKAFQAVDQFLQIVK 536 (778)
Q Consensus 505 ~~R~A~l~a--------~------~--------------~~~~VR~~a~~~~~~~l~~l~ 536 (778)
..|.||+.+ . | ++..||..|..++..|.+.+.
T Consensus 381 ~~r~~a~~~l~~i~~~~~~~~~~~~~~~~l~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~ 440 (876)
T 1qgr_A 381 RYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLP 440 (876)
T ss_dssp HHHHHHHHHHHHTSSSSCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCG
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhCc
Confidence 999999887 1 1 678899999999888887654
|
| >4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A | Back alignment and structure |
|---|
Probab=97.68 E-value=0.0006 Score=77.68 Aligned_cols=227 Identities=11% Similarity=0.059 Sum_probs=154.6
Q ss_pred cccCChhhHhHhhhhchhhhcCCC----hhhhhhchHHHHHHHHhhCCCCc---hhhHHHHHhccCCCh---hhhhhhhH
Q 004025 305 LNLKDSVEKDTFFRKLPNLAEQLP----RQIVLKKLLPLLASALEFGSAAA---PALTALLKMGSWLST---EEFSVKVL 374 (778)
Q Consensus 305 l~~k~~~EK~~F~~~L~~~l~~fp----~~~~~~kILP~Ll~~~~~~~~~~---~~L~~llki~~~l~~---eef~~~i~ 374 (778)
+.-.+++.+..-...|..++..-+ ..+....++|.|++.+....... .++..+-.|+..-+. .-...-++
T Consensus 83 L~s~~~~~~~~A~~~L~~l~s~~~~~~~~~~~~~g~v~~Lv~lL~~~~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i 162 (528)
T 4b8j_A 83 VYSDDNNLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVQFLTREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAV 162 (528)
T ss_dssp HTSSCHHHHHHHHHHHHHHHTCSSSCCHHHHHHTTCHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHH
T ss_pred HcCCCHHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCHHHHHHHHhCCcH
Confidence 334455555555555555544332 35666789999999987653211 122233344442111 11223578
Q ss_pred HHHHHhhcCChHHHHHHHHHhHHHHHhh---cChhhhhhcchHHHHhhc-CCCcHHHHHHHHHHHHhhhccC--ChhhHh
Q 004025 375 PTIVKLFASNDRAIRVALLQHIDQYGQS---FSAQVVDEQVYPHVATGF-ADTSAFLREMTLKSMLVLAPKL--SQRTIS 448 (778)
Q Consensus 375 P~i~~lF~~~Dr~iR~~LL~~l~~~~~~---l~~~~v~~~I~P~l~~gf-~Dt~~~iRe~tlksi~~l~pkL--~~~~l~ 448 (778)
|.++.++.+++..+|...+.-|-.+... .-...+...++|.++..+ .+.+..+|..++.++..++..- ....+.
T Consensus 163 ~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~i~~~g~l~~Ll~lL~~~~~~~v~~~a~~~L~~L~~~~~~~~~~~~ 242 (528)
T 4b8j_A 163 PIFVKLLGSSSDDVREQAVWALGNVAGDSPKCRDLVLANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRGKPQPSFEQT 242 (528)
T ss_dssp HHHHHHTTCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHTTCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCSSSCCCHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHhCCChhhHHHHHHCCcHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCCCcHHHH
Confidence 9999999999999997777766666543 223445567899999999 7889999999999998888642 223345
Q ss_pred HHHHHHHHhhccCCCCcchhhHHHHHHHhhhhccccc---chhhhHHHHHhhhhcCCCchhhhheeee----cc------
Q 004025 449 GSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGT---RKRVLINAFTVRALRDTFSPARGAAKIL----SY------ 515 (778)
Q Consensus 449 ~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~---~~~vL~~af~~~~lkD~f~~~R~A~l~a----~~------ 515 (778)
..+++.|.++..++++.||.+++-+|+.|+..-.... ...=+++.+. ..|+++....|..|+.+ ..
T Consensus 243 ~~~l~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~v~~Lv-~lL~~~~~~v~~~a~~~L~nl~~~~~~~~ 321 (528)
T 4b8j_A 243 RPALPALARLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLV-ELLLHPSPSVLIPALRTVGNIVTGDDAQT 321 (528)
T ss_dssp TTHHHHHHHHTTCCCHHHHHHHHHHHHHHTSSCHHHHHHHHHTTCHHHHH-HHTTCSCHHHHHHHHHHHHHHTTSCHHHH
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCHHHHHH-HHHcCCChhHHHHHHHHHHHHHcCCHHHH
Confidence 6789999999899999999999999999996533211 1122578888 89999999999888877 10
Q ss_pred ------------------C-CHHHHHHHHHHHHHHH
Q 004025 516 ------------------L-NCDVRSKAFQAVDQFL 532 (778)
Q Consensus 516 ------------------~-~~~VR~~a~~~~~~~l 532 (778)
. +..||..|..++..+.
T Consensus 322 ~~~~~~~~l~~L~~lL~~~~~~~v~~~A~~~L~nl~ 357 (528)
T 4b8j_A 322 QCIIDHQALPCLLSLLTQNLKKSIKKEACWTISNIT 357 (528)
T ss_dssp HHHHTTTHHHHHHHHHHSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhHHHHHHHHcCCCcHHHHHHHHHHHHHHH
Confidence 4 6778887777766654
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=97.62 E-value=0.0001 Score=78.01 Aligned_cols=31 Identities=10% Similarity=0.094 Sum_probs=26.7
Q ss_pred CccccccCCCCeEEcC--CCcEEEEeccccccc
Q 004025 149 KLVHGNVCLSSVVVTQ--TLDWKLHAFDVLSEF 179 (778)
Q Consensus 149 ~ivH~dLkp~NI~v~~--~g~~KL~dFgla~~~ 179 (778)
.++|||+++.||+++. .+.+.|+||+.+..-
T Consensus 192 ~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~ 224 (304)
T 3sg8_A 192 CLIHNDFSSDHILFDTEKNTICGIIDFGDAAIS 224 (304)
T ss_dssp EEECSCCCGGGEEEETTTTEEEEECCCTTCEEE
T ss_pred eeEeCCCCcccEEEeCCCCCEEEEEeCCCCccC
Confidence 4899999999999998 556889999998654
|
| >1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00032 Score=84.61 Aligned_cols=139 Identities=12% Similarity=0.119 Sum_probs=110.2
Q ss_pred hhhHHHHHHhhc-------CChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCC
Q 004025 371 VKVLPTIVKLFA-------SNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLS 443 (778)
Q Consensus 371 ~~i~P~i~~lF~-------~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~ 443 (778)
..++|.+++++. ..+..+|...+.-|..+...++... -..++|.+..++.|.+..+|+.++.++-.++..+.
T Consensus 320 ~~ll~~ll~~l~~~~~d~~~~~~~~r~~a~~~l~~l~~~~~~~~-~~~~l~~l~~~l~~~~~~~r~~a~~~l~~i~~~~~ 398 (876)
T 1qgr_A 320 QYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDI-VPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPE 398 (876)
T ss_dssp HHHHHHHHHHTTCCCSSCCTTCCCHHHHHHHHHHHHHHHHGGGG-HHHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSC
T ss_pred HHHhHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHCcHhh-HHHHHHHHHHHccCCChHHHHHHHHHHHHHHcCCC
Confidence 567788888775 2356899999999999999888554 45799999999999999999999999999998776
Q ss_pred hh---hHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccc----cchhhhHHHHHhhhhcCCCchhhhheee
Q 004025 444 QR---TISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEG----TRKRVLINAFTVRALRDTFSPARGAAKI 512 (778)
Q Consensus 444 ~~---~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~----~~~~vL~~af~~~~lkD~f~~~R~A~l~ 512 (778)
.. .....++|.|.++..|+.+.||..++.||++++..+... .--.-+++.+. +.|+|+ ...|.+++.
T Consensus 399 ~~~~~~~~~~~l~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~l~~~l~~l~-~~l~~~-~~v~~~a~~ 472 (876)
T 1qgr_A 399 PSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAAINDVYLAPLLQCLI-EGLSAE-PRVASNVCW 472 (876)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCGGGTSSTTTHHHHHHHHH-HHTTSC-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhCchhcccHHHHHHHHHHHH-HHHcCC-HHHHHHHHH
Confidence 32 234678999988889999999999999999999998652 22344567777 788886 666665543
|
| >4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00025 Score=72.17 Aligned_cols=143 Identities=19% Similarity=0.172 Sum_probs=112.1
Q ss_pred hhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhh---cChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChh-
Q 004025 370 SVKVLPTIVKLFASNDRAIRVALLQHIDQYGQS---FSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQR- 445 (778)
Q Consensus 370 ~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~---l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~- 445 (778)
...++|.+++++.+.+..+|...+.-|..+... .....+...++|.++..+.+.++.+|+.++.++..++..-..+
T Consensus 52 ~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~ 131 (252)
T 4db8_A 52 DAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQI 131 (252)
T ss_dssp HTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHH
T ss_pred HcCcHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHhhcCCchHH
Confidence 345789999999999999998888777777653 2234455668999999999999999999999999887654433
Q ss_pred --hHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhccccc---chhhhHHHHHhhhhcCCCchhhhheeee
Q 004025 446 --TISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGT---RKRVLINAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 446 --~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~---~~~vL~~af~~~~lkD~f~~~R~A~l~a 513 (778)
.+...+++.|.++..++++.+|.+++-+|+.|+..-.... ...-+++.+. +.|+++....|..++.+
T Consensus 132 ~~~~~~~~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~-~ll~~~~~~v~~~a~~~ 203 (252)
T 4db8_A 132 QAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALV-QLLSSPNEQILQEALWA 203 (252)
T ss_dssp HHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHH-HGGGCSSHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHH-HHHCCCCHHHHHHHHHH
Confidence 3445688999998889999999999999999996432211 1123578888 89999988888888877
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00057 Score=70.57 Aligned_cols=62 Identities=10% Similarity=0.107 Sum_probs=45.4
Q ss_pred EEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecccccCCcccEEEEEecCC
Q 004025 35 SHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATSTKITIYIVTEPV 109 (778)
Q Consensus 35 ~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~g~~~~~~lyIVtE~v 109 (778)
.||+...+.++..+.+|+... .....+.+|...|+.|. +--+.+++.+.+++ ..-|+|||++
T Consensus 40 ~v~rl~~~~~~~~~~lk~~~~-----~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~--------~~~~lvme~l 102 (272)
T 4gkh_A 40 TIYRLYGKPNAPELFLKHGKG-----SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTP--------DDAWLLTTAI 102 (272)
T ss_dssp EEEEEECCTTCCCEEEEEEET-----HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEET--------TEEEEEEECC
T ss_pred eEEEEEecCCCeEEEEEECCC-----CCHhHHHHHHHHHHHhccCCCcCeEEEEEEEC--------CeEEEEEEee
Confidence 688888777788899998653 23445778999888875 22256677776653 3689999999
|
| >2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00059 Score=70.46 Aligned_cols=145 Identities=13% Similarity=0.144 Sum_probs=108.7
Q ss_pred hhhhhhhhHHHHHHhh-cCChHHHHHHHHHhHHHHHhhcC-hhh---hhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhc
Q 004025 366 TEEFSVKVLPTIVKLF-ASNDRAIRVALLQHIDQYGQSFS-AQV---VDEQVYPHVATGFADTSAFLREMTLKSMLVLAP 440 (778)
Q Consensus 366 ~eef~~~i~P~i~~lF-~~~Dr~iR~~LL~~l~~~~~~l~-~~~---v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~p 440 (778)
..+|. .++..+.+.+ ...+..||...++-+..+...+. +.. .-..|+|.++..|.|..+.||++...++..++.
T Consensus 55 ~~~~~-~~~~~L~~~l~~D~n~~v~~~A~~al~~la~~l~~~~f~~~y~~~llp~ll~~l~dkk~~V~~aa~~al~~i~~ 133 (249)
T 2qk1_A 55 SQNYS-NLLGIYGHIIQKDANIQAVALAAQSVELICDKLKTPGFSKDYVSLVFTPLLDRTKEKKPSVIEAIRKALLTICK 133 (249)
T ss_dssp TCCCH-HHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHCTTTSCHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHH
T ss_pred cccHH-HHHHHHHHHhccCCCHHHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 44554 4578888888 68888999999999999999887 431 224589999999999999999998888888887
Q ss_pred cCChhhH---hHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccc--c---ch-hhhHHHHHhhhhcCCCchhhhhee
Q 004025 441 KLSQRTI---SGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEG--T---RK-RVLINAFTVRALRDTFSPARGAAK 511 (778)
Q Consensus 441 kL~~~~l---~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~--~---~~-~vL~~af~~~~lkD~f~~~R~A~l 511 (778)
.++...+ ...||+.|........+.||..++.+|+.++..-... . .- +.|+|.+. +.|.|+....|.||.
T Consensus 134 ~~~~~~~~~~l~~ll~~l~~~l~~k~~~vk~~al~~l~~~~~~~~~~~~~l~~~l~~~iip~l~-~~l~D~~~~VR~aA~ 212 (249)
T 2qk1_A 134 YYDPLASSGRNEDMLKDILEHMKHKTPQIRMECTQLFNASMKEEKDGYSTLQRYLKDEVVPIVI-QIVNDTQPAIRTIGF 212 (249)
T ss_dssp HSCTTCTTCTTHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCCSCSHHHHHHHTTTHHHHHH-HHHTCSSHHHHHHHH
T ss_pred HccccccCCcHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHH-HHhcCCCHHHHHHHH
Confidence 6643111 2356666666556668999999999999999876641 1 22 67899999 999998754444444
Q ss_pred e
Q 004025 512 I 512 (778)
Q Consensus 512 ~ 512 (778)
.
T Consensus 213 ~ 213 (249)
T 2qk1_A 213 E 213 (249)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00078 Score=76.73 Aligned_cols=208 Identities=14% Similarity=0.155 Sum_probs=151.1
Q ss_pred hhhhchHHHHHHHHhhCCCC---chhhHHHHHhccC--CChhhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcCh
Q 004025 331 IVLKKLLPLLASALEFGSAA---APALTALLKMGSW--LSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSA 405 (778)
Q Consensus 331 ~~~~kILP~Ll~~~~~~~~~---~~~L~~llki~~~--l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~ 405 (778)
+....++|.|++.+...... ..++..+..++.. .........++|.+++++...|..++...+.-|..+...-+.
T Consensus 198 i~~~g~l~~Ll~lL~~~~~~~v~~~a~~~L~~L~~~~~~~~~~~~~~~l~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~ 277 (528)
T 4b8j_A 198 VLANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRGKPQPSFEQTRPALPALARLIHSNDEEVLTDACWALSYLSDGTND 277 (528)
T ss_dssp HHHTTCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCSSSCCCHHHHTTHHHHHHHHTTCCCHHHHHHHHHHHHHHTSSCHH
T ss_pred HHHCCcHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHcCCHH
Confidence 34455788888877422211 1122333344433 233455677899999999999999998888888877765433
Q ss_pred ---hhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCCh---hhHhHHHHHHHHhhccCC-CCcchhhHHHHHHHhh
Q 004025 406 ---QVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQ---RTISGSLLKYLSKLQVDE-EPAIRTNTTILLGNIA 478 (778)
Q Consensus 406 ---~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~---~~l~~~LL~~laklq~D~-~~~IRtnt~icl~kIa 478 (778)
..+...++|.++..+.+.++.+|+.++.+|-.++..-.. ..++..+++.|..+..++ .+.||..++-+|+.|+
T Consensus 278 ~~~~~~~~g~v~~Lv~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~~~~l~~L~~lL~~~~~~~v~~~A~~~L~nl~ 357 (528)
T 4b8j_A 278 KIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTGDDAQTQCIIDHQALPCLLSLLTQNLKKSIKKEACWTISNIT 357 (528)
T ss_dssp HHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHTTTHHHHHHHHHHSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCHHHHHHHHHcCCChhHHHHHHHHHHHHHcCCHHHHHHHHHhhhHHHHHHHHcCCCcHHHHHHHHHHHHHHH
Confidence 345667999999999999999999999999888853322 234566788888888887 8999999999999999
Q ss_pred hhcccccchh----hhHHHHHhhhhcCCCchhhhheeee------c-------c----------------CCHHHHHHHH
Q 004025 479 SHLNEGTRKR----VLINAFTVRALRDTFSPARGAAKIL------S-------Y----------------LNCDVRSKAF 525 (778)
Q Consensus 479 ~~L~~~~~~~----vL~~af~~~~lkD~f~~~R~A~l~a------~-------~----------------~~~~VR~~a~ 525 (778)
.. ....++. -+++.+. +.|++.....|.+|+.+ . + ++..||..|.
T Consensus 358 ~~-~~~~~~~~~~~~~i~~L~-~lL~~~~~~v~~~a~~aL~nl~~~~~~~~~~~l~~~~~i~~L~~lL~~~d~~v~~~al 435 (528)
T 4b8j_A 358 AG-NKDQIQAVINAGIIGPLV-NLLQTAEFDIKKEAAWAISNATSGGSHDQIKYLVSEGCIKPLCDLLICPDIRIVTVCL 435 (528)
T ss_dssp TS-CHHHHHHHHHTTCHHHHH-HHHHHSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHH
T ss_pred CC-CHHHHHHHHHCCCHHHHH-HHHhcCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHH
Confidence 63 2222222 3467888 88998888899888877 0 0 7889999999
Q ss_pred HHHHHHHHHHHHHHh
Q 004025 526 QAVDQFLQIVKQYHE 540 (778)
Q Consensus 526 ~~~~~~l~~l~~~~~ 540 (778)
.++..++..-++...
T Consensus 436 ~~L~~l~~~~~~~~~ 450 (528)
T 4b8j_A 436 EGLENILKVGETDKT 450 (528)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhh
Confidence 999999887766433
|
| >1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16 | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00037 Score=72.46 Aligned_cols=120 Identities=11% Similarity=0.110 Sum_probs=91.5
Q ss_pred hhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHh
Q 004025 369 FSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTIS 448 (778)
Q Consensus 369 f~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~ 448 (778)
+...++|.++.++.++|..||...+.-|-.+.. ...+|.++..+.|.++.||..++.++-.+... .
T Consensus 125 ~~~~~~~~L~~~l~d~~~~vR~~a~~aL~~~~~--------~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~~------~ 190 (280)
T 1oyz_A 125 YSPKIVEQSQITAFDKSTNVRRATAFAISVIND--------KATIPLLINLLKDPNGDVRNWAAFAININKYD------N 190 (280)
T ss_dssp GHHHHHHHHHHHTTCSCHHHHHHHHHHHHTC-----------CCHHHHHHHHTCSSHHHHHHHHHHHHHHTCC------C
T ss_pred ccHHHHHHHHHHhhCCCHHHHHHHHHHHHhcCC--------HHHHHHHHHHHcCCCHHHHHHHHHHHHhhccC------c
Confidence 455678899999999999999888877655432 24788999999999999999999998766311 2
Q ss_pred HHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhhheeee
Q 004025 449 GSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 449 ~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~l~a 513 (778)
.++++.|.++..|+++.||..++.+|++|. ..-.++++. ..|+|+. .|.+++.+
T Consensus 191 ~~~~~~L~~~l~d~~~~vR~~A~~aL~~~~--------~~~~~~~L~-~~l~d~~--vr~~a~~a 244 (280)
T 1oyz_A 191 SDIRDCFVEMLQDKNEEVRIEAIIGLSYRK--------DKRVLSVLC-DELKKNT--VYDDIIEA 244 (280)
T ss_dssp HHHHHHHHHHTTCSCHHHHHHHHHHHHHTT--------CGGGHHHHH-HHHTSSS--CCHHHHHH
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHhC--------CHhhHHHHH-HHhcCcc--HHHHHHHH
Confidence 456777777778889999999999999987 223567777 8888876 56666665
|
| >2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00055 Score=79.62 Aligned_cols=184 Identities=14% Similarity=0.204 Sum_probs=118.6
Q ss_pred ccccchh-hhhhHHhhhcccCChhhHhHhhhhchhhhcCCChhhhhhchHHHHHHHHhhCCCCchhhHH--HHHhccCCC
Q 004025 289 EYFQNKL-VDTIHFMEILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTA--LLKMGSWLS 365 (778)
Q Consensus 289 ~ff~n~l-v~~~~~Le~l~~k~~~EK~~F~~~L~~~l~~fp~~~~~~kILP~Ll~~~~~~~~~~~~L~~--llki~~~l~ 365 (778)
.||...- -+..+.-+++...+..+|...++.+.-..- + +.-.....+.+++.+........-+.- +..+++.
T Consensus 5 ~~f~~~~~~e~~~i~~~L~~~~~~~k~~~~~kli~~~~-~--G~d~~~~~~~vi~l~~s~~~~~Krl~yl~l~~~~~~-- 79 (591)
T 2vgl_B 5 KYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMT-V--GKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKS-- 79 (591)
T ss_dssp CTTCCCSSSHHHHHHHHTTSSCHHHHHHHHHHHHHHHH-T--TCCCGGGHHHHHHTTSSSCHHHHHHHHHHHHHHHHH--
T ss_pred hhcccccCChHHHHHHHHcCCCHHHHHHHHHHHHHHHH-C--CCChHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccc--
Confidence 4665321 222333344555666677666665443221 1 111233456666644332211111111 1111111
Q ss_pred hhhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChh
Q 004025 366 TEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQR 445 (778)
Q Consensus 366 ~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~ 445 (778)
..|....++..+.+.+.+++..||-..|.-|..+. ...+.+.+.|.+..++.|.++.||..++.++..+..+-.+-
T Consensus 80 ~~e~~~l~~n~l~kdL~~~n~~ir~~AL~~L~~i~----~~~~~~~l~~~l~~~L~d~~~~VRk~A~~al~~i~~~~p~~ 155 (591)
T 2vgl_B 80 QPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIR----VDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQM 155 (591)
T ss_dssp SHHHHHTTHHHHGGGSSSSSHHHHHHHHHHHHTCC----SGGGHHHHHHHHHHHSSCSCHHHHHHHHHHHHHHHHSSCCC
T ss_pred CchHHHHHHHHHHHHcCCCCHHHHHHHHHHHHcCC----hHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhhChhh
Confidence 24555667888889999999999988886655443 44466678999999999999999999999999998754433
Q ss_pred hHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhc
Q 004025 446 TISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHL 481 (778)
Q Consensus 446 ~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L 481 (778)
.-...+++.|.++..|+++.||.+++.+|++|++.-
T Consensus 156 ~~~~~~~~~l~~lL~d~d~~V~~~A~~aL~~i~~~~ 191 (591)
T 2vgl_B 156 VEDQGFLDSLRDLIADSNPMVVANAVAALSEISESH 191 (591)
T ss_dssp HHHHHHHHHHHHTTSCSCHHHHHHHHHHHHHHTTSC
T ss_pred cccccHHHHHHHHhCCCChhHHHHHHHHHHHHHhhC
Confidence 323478999999999999999999999999999864
|
| >2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00046 Score=80.29 Aligned_cols=134 Identities=13% Similarity=0.260 Sum_probs=104.4
Q ss_pred hhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHH
Q 004025 372 KVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSL 451 (778)
Q Consensus 372 ~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~L 451 (778)
...+.+++++.++|..+|-..--.+..+.+. .++ +.--+...+...+.|.++.+|..+|++|..+. ...+...|
T Consensus 49 ~~~~~vi~l~~s~~~~~Krl~yl~l~~~~~~-~~e-~~~l~~n~l~kdL~~~n~~ir~~AL~~L~~i~----~~~~~~~l 122 (591)
T 2vgl_B 49 SLFPDVVNCMQTDNLELKKLVYLYLMNYAKS-QPD-MAIMAVNSFVKDCEDPNPLIRALAVRTMGCIR----VDKITEYL 122 (591)
T ss_dssp GGHHHHHHTTSSSCHHHHHHHHHHHHHHHHH-SHH-HHHTTHHHHGGGSSSSSHHHHHHHHHHHHTCC----SGGGHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHccc-Cch-HHHHHHHHHHHHcCCCCHHHHHHHHHHHHcCC----hHHHHHHH
Confidence 3567788899999988874433344444443 222 22345688889999999999999999998775 55567788
Q ss_pred HHHHHhhccCCCCcchhhHHHHHHHhhhhccccc-chhhhHHHHHhhhhcCCCchhhhheeee
Q 004025 452 LKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGT-RKRVLINAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 452 L~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~-~~~vL~~af~~~~lkD~f~~~R~A~l~a 513 (778)
++.+.++..|+.|.||-.+++|+++|... +++. ...-+++.+. ..|.|+.+-+|.+|+.+
T Consensus 123 ~~~l~~~L~d~~~~VRk~A~~al~~i~~~-~p~~~~~~~~~~~l~-~lL~d~d~~V~~~A~~a 183 (591)
T 2vgl_B 123 CEPLRKCLKDEDPYVRKTAAVCVAKLHDI-NAQMVEDQGFLDSLR-DLIADSNPMVVANAVAA 183 (591)
T ss_dssp HHHHHHHSSCSCHHHHHHHHHHHHHHHHS-SCCCHHHHHHHHHHH-HTTSCSCHHHHHHHHHH
T ss_pred HHHHHHHcCCCChHHHHHHHHHHHHHHhh-ChhhcccccHHHHHH-HHhCCCChhHHHHHHHH
Confidence 89899999999999999999999999984 3433 3335789999 99999999999999988
|
| >3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00034 Score=80.11 Aligned_cols=206 Identities=13% Similarity=0.143 Sum_probs=146.7
Q ss_pred CChhhhhhchHHHHHHHHhhCCCC--chhhHHHHHhccCCCh---hhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHh
Q 004025 327 LPRQIVLKKLLPLLASALEFGSAA--APALTALLKMGSWLST---EEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQ 401 (778)
Q Consensus 327 fp~~~~~~kILP~Ll~~~~~~~~~--~~~L~~llki~~~l~~---eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~ 401 (778)
.+.......++|.|++.+...... ..++..+..++..-.. .-....++|.++.++...+..++...+.-|-.++.
T Consensus 243 ~~~~~~~~~~lp~L~~LL~~~~~~v~~~a~~aL~~l~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~a~~aL~nl~~ 322 (529)
T 3tpo_A 243 APPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVT 322 (529)
T ss_dssp CCCHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTT
T ss_pred hhhHHHHhhHHHHHHHHhcCCcHHHHHHHHHHHHHhhhhhhhhHHHHHhccchHHHHHHhcCCChhHHHHHHHHHHHHHc
Confidence 344445567899998887654321 1122223333332211 11345688999999999999998777766666653
Q ss_pred h---cChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCCh---hhHhHHHHHHHHhhccCCCCcchhhHHHHHH
Q 004025 402 S---FSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQ---RTISGSLLKYLSKLQVDEEPAIRTNTTILLG 475 (778)
Q Consensus 402 ~---l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~---~~l~~~LL~~laklq~D~~~~IRtnt~icl~ 475 (778)
. .....+...++|.|+..+.+.++.||+.++.++..|+-.-.. ..+...++|.|..+..+.+..+|..++-+|+
T Consensus 323 ~~~~~~~~i~~~g~l~~L~~LL~~~~~~i~~~a~~aL~nl~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~ 402 (529)
T 3tpo_A 323 GTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKAAAWAIT 402 (529)
T ss_dssp SCHHHHHHHHHTTGGGGHHHHTTCSSHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHH
T ss_pred cchHHHHHHhhcccHHHHHHHHcCCCHHHHHHHHHHHHHHhcccHHHHHHHHhcCcHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 3 233456777899999999999999999999999888743222 2345568888888888889999999999999
Q ss_pred Hhhhhcccccchhh----hHHHHHhhhhcCCCchhhhheeee-----c----------c-------------------CC
Q 004025 476 NIASHLNEGTRKRV----LINAFTVRALRDTFSPARGAAKIL-----S----------Y-------------------LN 517 (778)
Q Consensus 476 kIa~~L~~~~~~~v----L~~af~~~~lkD~f~~~R~A~l~a-----~----------~-------------------~~ 517 (778)
.++..-+.+.+..+ .++.+. ..|+.+....+..+|.+ + | .+
T Consensus 403 nl~~~~~~~~~~~l~~~g~i~~L~-~LL~~~d~~i~~~~L~aL~nil~~~~~~~~~~~~~~~iee~ggl~~ie~Lq~~~n 481 (529)
T 3tpo_A 403 NYTSGGTVEQIVYLVHCGIIEPLM-NLLSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQRHEN 481 (529)
T ss_dssp HHHHHSCHHHHHHHHHTTCHHHHH-HGGGCSCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHTTCHHHHTGGGGCSS
T ss_pred HHHcCCCHHHHHHHHHCcCHHHHH-HHhcCCCHHHHHHHHHHHHHHHHHhHhccChHHHHHHHHHCCcHHHHHHHHcCCC
Confidence 99876555443322 377888 89999999888888776 0 0 88
Q ss_pred HHHHHHHHHHHHHHHH
Q 004025 518 CDVRSKAFQAVDQFLQ 533 (778)
Q Consensus 518 ~~VR~~a~~~~~~~l~ 533 (778)
.+|+..|.+.++.|..
T Consensus 482 ~~i~~~A~~iie~yf~ 497 (529)
T 3tpo_A 482 ESVYKASLNLIEKYFS 497 (529)
T ss_dssp HHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHCC
Confidence 9999999999999974
|
| >3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ... | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00044 Score=78.95 Aligned_cols=206 Identities=13% Similarity=0.145 Sum_probs=145.6
Q ss_pred CChhhhhhchHHHHHHHHhhCCCC--chhhHHHHHhccCCCh---hhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHh
Q 004025 327 LPRQIVLKKLLPLLASALEFGSAA--APALTALLKMGSWLST---EEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQ 401 (778)
Q Consensus 327 fp~~~~~~kILP~Ll~~~~~~~~~--~~~L~~llki~~~l~~---eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~ 401 (778)
.+.-.....++|.|.+.+...... ..++..+-.++..-.. .-....++|.++.++.+.+..++...+.-|-.+..
T Consensus 224 ~~~~~~~~~~lp~L~~LL~~~~~~v~~~A~~aL~~L~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~al~aL~nl~~ 303 (510)
T 3ul1_B 224 APPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVT 303 (510)
T ss_dssp CCCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHhHHHHHHHHHhcCCHHHHHHHHHHHHHHhhchhhhHHHHHhcccchhhhhhhcCCChhhhhHHHHHHHHhhc
Confidence 333444567889888877654321 1122223333332211 11234578999999999999998777666665543
Q ss_pred h---cChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCCh---hhHhHHHHHHHHhhccCCCCcchhhHHHHHH
Q 004025 402 S---FSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQ---RTISGSLLKYLSKLQVDEEPAIRTNTTILLG 475 (778)
Q Consensus 402 ~---l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~---~~l~~~LL~~laklq~D~~~~IRtnt~icl~ 475 (778)
. .....++..++|.|+..+.+.+..+|+.+..++..|+-.-.+ ..+...++|.|..+..+.+..+|.+++.+|+
T Consensus 304 ~~~~~~~~i~~~g~l~~L~~LL~~~~~~v~~~A~~aL~nl~a~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~Aa~aL~ 383 (510)
T 3ul1_B 304 GTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAIT 383 (510)
T ss_dssp SCHHHHHHHHHTTGGGGCC-CTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHH
T ss_pred CCHHHHHHHhhccchHHHHHHhcCCCHHHHHHHHHHHHHHHcCcHHHHHHHHhcCCHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 3 234456777899999999999999999999999888743222 2234568888888888889999999999999
Q ss_pred Hhhhhcccccchhh----hHHHHHhhhhcCCCchhhhheeee-----c----------c-------------------CC
Q 004025 476 NIASHLNEGTRKRV----LINAFTVRALRDTFSPARGAAKIL-----S----------Y-------------------LN 517 (778)
Q Consensus 476 kIa~~L~~~~~~~v----L~~af~~~~lkD~f~~~R~A~l~a-----~----------~-------------------~~ 517 (778)
+++..-+.+.+..+ .++.+. ..|+.+.+..+..+|.+ + | ++
T Consensus 384 Nl~~~~~~~~~~~L~~~g~i~~L~-~LL~~~d~~i~~~~L~aL~nil~~~~~~~~~~~~~~~iee~ggl~~ie~Lq~~~n 462 (510)
T 3ul1_B 384 NYTSGGTVEQIVYLVHCGIIEPLM-NLLSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQRHEN 462 (510)
T ss_dssp HHHHHCCHHHHHHHHHTTCHHHHH-HGGGCSCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHTTHHHHHHHGGGCSS
T ss_pred HHHccCCHHHHHHHHHCCCHHHHH-HHhcCCCHHHHHHHHHHHHHHHHHhHhccchHHHHHHHHHcCcHHHHHHHHcCCC
Confidence 99986555444332 378888 89999999999888876 0 0 78
Q ss_pred HHHHHHHHHHHHHHHH
Q 004025 518 CDVRSKAFQAVDQFLQ 533 (778)
Q Consensus 518 ~~VR~~a~~~~~~~l~ 533 (778)
.+|+..|.+.++.|..
T Consensus 463 ~~i~~~A~~iie~yf~ 478 (510)
T 3ul1_B 463 ESVYKASLNLIEKYFS 478 (510)
T ss_dssp HHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHCC
Confidence 8999999999999874
|
| >3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00093 Score=76.51 Aligned_cols=204 Identities=16% Similarity=0.188 Sum_probs=146.1
Q ss_pred hhhhchHHHHHHHHhhCCCC---chhhH----HHHHhcc---CCChhhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHH
Q 004025 331 IVLKKLLPLLASALEFGSAA---APALT----ALLKMGS---WLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYG 400 (778)
Q Consensus 331 ~~~~kILP~Ll~~~~~~~~~---~~~L~----~llki~~---~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~ 400 (778)
+...-++|.|+..+...... ..++. .+-.++. ....-.....++|.+++++.+.|..++...+.-|..+.
T Consensus 200 i~~~g~i~~Ll~lL~~~~~~~~~~~~~~~a~~~L~nl~~~~~~~~~~~~~~~~lp~L~~LL~~~~~~v~~~a~~aL~~l~ 279 (529)
T 3tpo_A 200 VIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLT 279 (529)
T ss_dssp HHHTTCHHHHHHTTCSSCGGGSCHHHHHHHHHHHHHHHCCCTTCCCHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred HHHcCCcHHHHHHHhccchhHhHHHHHHHHHHHHHHHHhcccchhhHHHHhhHHHHHHHHhcCCcHHHHHHHHHHHHHhh
Confidence 44556778888777644311 11111 1222222 22233445678999999999999999987777777766
Q ss_pred hhcCh---hhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCC---hhhHhHHHHHHHHhhccCCCCcchhhHHHHH
Q 004025 401 QSFSA---QVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLS---QRTISGSLLKYLSKLQVDEEPAIRTNTTILL 474 (778)
Q Consensus 401 ~~l~~---~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~---~~~l~~~LL~~laklq~D~~~~IRtnt~icl 474 (778)
..-+. .++...++|.++..+.+.+..+++.+++++-.++..-+ ...+....++.|.++..++.+.||-+++-+|
T Consensus 280 ~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~a~~aL~nl~~~~~~~~~~i~~~g~l~~L~~LL~~~~~~i~~~a~~aL 359 (529)
T 3tpo_A 280 DGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTM 359 (529)
T ss_dssp SSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGHHHHTTCSSHHHHHHHHHHH
T ss_pred hhhhhhHHHHHhccchHHHHHHhcCCChhHHHHHHHHHHHHHccchHHHHHHhhcccHHHHHHHHcCCCHHHHHHHHHHH
Confidence 54332 35667799999999999999999999999988874322 2335566788899998899999999999999
Q ss_pred HHhhhhcccccch----hhhHHHHHhhhhcCCCchhhhheeee--c-----------c----------------CCHHHH
Q 004025 475 GNIASHLNEGTRK----RVLINAFTVRALRDTFSPARGAAKIL--S-----------Y----------------LNCDVR 521 (778)
Q Consensus 475 ~kIa~~L~~~~~~----~vL~~af~~~~lkD~f~~~R~A~l~a--~-----------~----------------~~~~VR 521 (778)
+.|+..-. ..+. .-+++.+. ..|+++....|..|..+ . + ++..|+
T Consensus 360 ~nl~~~~~-~~~~~v~~~g~i~~Lv-~lL~~~~~~v~~~A~~aL~nl~~~~~~~~~~~l~~~g~i~~L~~LL~~~d~~i~ 437 (529)
T 3tpo_A 360 SNITAGRQ-DQIQQVVNHGLVPFLV-GVLSKADFKTQKAAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKII 437 (529)
T ss_dssp HHHHTSCH-HHHHHHHHTTHHHHHH-HHHHSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHHHGGGCSCHHHH
T ss_pred HHHhcccH-HHHHHHHhcCcHHHHH-HHhcCCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCcCHHHHHHHhcCCCHHHH
Confidence 99986422 2222 23577777 89999999999988776 0 0 788999
Q ss_pred HHHHHHHHHHHHHHH
Q 004025 522 SKAFQAVDQFLQIVK 536 (778)
Q Consensus 522 ~~a~~~~~~~l~~l~ 536 (778)
..+.+++..+++.-+
T Consensus 438 ~~~L~aL~nil~~~~ 452 (529)
T 3tpo_A 438 QVILDAISNIFQAAE 452 (529)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhH
Confidence 999998888876544
|
| >3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0015 Score=70.87 Aligned_cols=148 Identities=18% Similarity=0.227 Sum_probs=112.9
Q ss_pred HHHHHhccCCChhhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHH
Q 004025 355 TALLKMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKS 434 (778)
Q Consensus 355 ~~llki~~~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlks 434 (778)
.-++..|+.+++.| ...+.+-++++|.++|-.+|=...-++..|.+. +++.+ -+...|..-++|.|+.+|-.+|++
T Consensus 52 l~l~~~G~~f~~~e-~t~lf~~v~kl~~s~d~~lKrLvYLyl~~~~~~-~~e~i--Lv~Nsl~kDl~~~N~~iR~lALRt 127 (355)
T 3tjz_B 52 LYLINQGEHLGTTE-ATEAFFAMTKLFQSNDPTLRRMCYLTIKEMSCI-AEDVI--IVTSSLTKDMTGKEDSYRGPAVRA 127 (355)
T ss_dssp HHHHHHTCCCCHHH-HHHHHHHHHGGGGCCCHHHHHHHHHHHHHHTTT-SSCGG--GGHHHHHHHHHSSCHHHHHHHHHH
T ss_pred HHHHHCCCCCchhH-HHHHHHHHHHHhcCCCHHHHHHHHHHHHHhCCC-HHHHH--HHHHHHHhhcCCCcHhHHHHHHHH
Confidence 33455666666555 346779999999999999985555566666655 44433 467888888999999999999999
Q ss_pred HHhhhccCChhhHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhhheeee
Q 004025 435 MLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 435 i~~l~pkL~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~l~a 513 (778)
|..|. +..+...|.+++.+...|..|.||-++++|..||.+.- ++..++ ++.... .++.|..+-+-..|+.+
T Consensus 128 L~~I~----~~~m~~~l~~~lk~~L~d~~pyVRk~A~l~~~kL~~~~-pe~v~~-~~~~l~-~ll~d~n~~V~~~Al~l 199 (355)
T 3tjz_B 128 LCQIT----DSTMLQAIERYMKQAIVDKVPSVSSSALVSSLHLLKCS-FDVVKR-WVNEAQ-EAASSDNIMVQYHALGL 199 (355)
T ss_dssp HHHHC----CTTTHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHTTTC-HHHHHT-THHHHH-HHTTCSSHHHHHHHHHH
T ss_pred HhcCC----CHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhccC-HHHHHH-HHHHHH-HHhcCCCccHHHHHHHH
Confidence 99876 66678899999999999999999999999999998664 444333 677778 88888775555455544
|
| >4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.0019 Score=67.36 Aligned_cols=179 Identities=16% Similarity=0.098 Sum_probs=116.1
Q ss_pred hhcccCChhhHhHhhhhchhhhcCCChhhh-------hhchHHHHHHHHhhCCCC--chhhHHHHHhccCCCh-------
Q 004025 303 EILNLKDSVEKDTFFRKLPNLAEQLPRQIV-------LKKLLPLLASALEFGSAA--APALTALLKMGSWLST------- 366 (778)
Q Consensus 303 e~l~~k~~~EK~~F~~~L~~~l~~fp~~~~-------~~kILP~Ll~~~~~~~~~--~~~L~~llki~~~l~~------- 366 (778)
+.+.-|.-.+|.+=+..|.+.+..-+.... ...+++.+.+.+...+.. ...|..+-.+...+..
T Consensus 16 e~l~sk~WK~R~eale~l~~~~~~~~~~~~~~~~~~~~~~~~~~lkk~l~DsN~~v~~~al~~l~~~~~~~~~~~~~~~~ 95 (278)
T 4ffb_C 16 ERLTYKLWKARLEAYKELNQLFRNSVGDISRDDNIQIYWRDPTLFAQYITDSNVVAQEQAIVALNSLIDAFASSSLKNAH 95 (278)
T ss_dssp HHTTCSSHHHHHHHHHHHHHHHHTC----------CCTTSCTHHHHHHTTCSSHHHHHHHHHHHHHHHTTCC---CCHHH
T ss_pred HhcccCcHHHHHHHHHHHHHHHhhCcccccchhHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhhhcccch
Confidence 455566666777777776666655443221 223455555555433211 1123333334333321
Q ss_pred -hhhhhhhHHHHH-HhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCCh
Q 004025 367 -EEFSVKVLPTIV-KLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQ 444 (778)
Q Consensus 367 -eef~~~i~P~i~-~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~ 444 (778)
..+...++|.|+ +++.+....+|-..++-+-.+++..... +.++..+..|+...+|.+|..++..|..++..++.
T Consensus 96 ~~~~~~~~l~~lveK~l~~~k~~~~~~a~~~l~~~~~~~~~~---~~~~e~l~~~l~~Knpkv~~~~l~~l~~~l~~fg~ 172 (278)
T 4ffb_C 96 NITLISTWTPLLVEKGLTSSRATTKTQSMSCILSLCGLDTSI---TQSVELVIPFFEKKLPKLIAAAANCVYELMAAFGL 172 (278)
T ss_dssp HHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHTSSSS---HHHHHHHGGGGGCSCHHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHhcCcH---HHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHhCC
Confidence 223455677766 5678888888888888787777765432 34678888999999999999999999998877655
Q ss_pred hhH-----hHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccc
Q 004025 445 RTI-----SGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEG 484 (778)
Q Consensus 445 ~~l-----~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~ 484 (778)
..+ ...+++.+.++..|.++.||..++-|++.|-.++++.
T Consensus 173 ~~~~~k~~l~~i~~~l~k~l~d~~~~VR~aA~~l~~~ly~~~G~~ 217 (278)
T 4ffb_C 173 TNVNVQTFLPELLKHVPQLAGHGDRNVRSQTMNLIVEIYKVTGNN 217 (278)
T ss_dssp TTCCHHHHHHHHGGGHHHHHTCSSHHHHHHHHHHHHHHHTC----
T ss_pred CcCCchhHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhCcc
Confidence 443 3457778889999999999999999999999999864
|
| >4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0019 Score=63.59 Aligned_cols=137 Identities=17% Similarity=0.181 Sum_probs=99.7
Q ss_pred hhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhc---ChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCCh---
Q 004025 371 VKVLPTIVKLFASNDRAIRVALLQHIDQYGQSF---SAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQ--- 444 (778)
Q Consensus 371 ~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l---~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~--- 444 (778)
..++|.++.++.+.+..+|...+.-|..+...- -...+...++|.++..+.+.++.+|+.++.++-.++..-.+
T Consensus 53 ~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~ 132 (210)
T 4db6_A 53 AGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQ 132 (210)
T ss_dssp TTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred cCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHcCCHHHHH
Confidence 357899999999999999877777777665322 23355667899999999999999999999999988853222
Q ss_pred hhHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhh----hHHHHHhhhhcCCCchhhhh
Q 004025 445 RTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRV----LINAFTVRALRDTFSPARGA 509 (778)
Q Consensus 445 ~~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~v----L~~af~~~~lkD~f~~~R~A 509 (778)
..+...+++.|.++..++++.+|.+++-+|+.|+..- ++.+..+ .++.+. +.++++....|..
T Consensus 133 ~~~~~~~i~~L~~ll~~~~~~v~~~a~~aL~~l~~~~-~~~~~~~~~~g~i~~L~-~ll~~~~~~v~~~ 199 (210)
T 4db6_A 133 AVIDAGALPALVQLLSSPNEQILQEALWALSNIASGG-NEQKQAVKEAGALEKLE-QLQSHENEKIQKE 199 (210)
T ss_dssp HHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSC-HHHHHHHHHTTHHHHHH-HGGGCSCHHHHHH
T ss_pred HHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcCC-cHHHHHHHHCCCHHHHH-HHHhCCCHHHHHH
Confidence 2335568899999888889999999999999999742 2233222 355555 6666654443333
|
| >1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16 | Back alignment and structure |
|---|
Probab=97.08 E-value=9e-05 Score=68.32 Aligned_cols=119 Identities=13% Similarity=0.103 Sum_probs=80.8
Q ss_pred hhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHh
Q 004025 369 FSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTIS 448 (778)
Q Consensus 369 f~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~ 448 (778)
+...-.+.++.++.++|..+|...+..|-.+. .. . +|.++..+.|.++.||..++.++-.+..
T Consensus 9 ~~~~~~~~l~~~L~~~~~~vR~~A~~~L~~~~----~~----~-~~~L~~~L~d~~~~vR~~A~~aL~~~~~-------- 71 (131)
T 1te4_A 9 HHSSGLVPRGSHMADENKWVRRDVSTALSRMG----DE----A-FEPLLESLSNEDWRIRGAAAWIIGNFQD-------- 71 (131)
T ss_dssp ------------CCSSCCCSSSSCCSSTTSCS----ST----T-HHHHHHGGGCSCHHHHHHHHHHHGGGCS--------
T ss_pred cccccHHHHHHHhcCCCHHHHHHHHHHHHHhC----ch----H-HHHHHHHHcCCCHHHHHHHHHHHHhcCC--------
Confidence 44455677888888899989877766554332 22 1 4889999999999999999999876642
Q ss_pred HHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhhheeee
Q 004025 449 GSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 449 ~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~l~a 513 (778)
.+.++.|.++..|+++.||..++..|++|.. .-.++++. ..|+|+....|.+++.+
T Consensus 72 ~~a~~~L~~~L~d~~~~VR~~A~~aL~~~~~--------~~a~~~L~-~~l~d~~~~vr~~A~~a 127 (131)
T 1te4_A 72 ERAVEPLIKLLEDDSGFVRSGAARSLEQIGG--------ERVRAAME-KLAETGTGFARKVAVNY 127 (131)
T ss_dssp HHHHHHHHHHHHHCCTHHHHHHHHHHHHHCS--------HHHHHHHH-HHTTSCCTHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCc--------HHHHHHHH-HHHhCCCHHHHHHHHHH
Confidence 2345566666679999999999999999873 23467777 88899888888777653
|
| >3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ... | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0021 Score=73.22 Aligned_cols=204 Identities=16% Similarity=0.186 Sum_probs=144.5
Q ss_pred hhhhchHHHHHHHHhhCCCC---chhhH----HHHHhcc---CCChhhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHH
Q 004025 331 IVLKKLLPLLASALEFGSAA---APALT----ALLKMGS---WLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYG 400 (778)
Q Consensus 331 ~~~~kILP~Ll~~~~~~~~~---~~~L~----~llki~~---~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~ 400 (778)
+...-.+|.|+..+...... ..++. .+-.++. ....-.....++|.++++..+.|..++...+.-|..+.
T Consensus 181 v~~~G~i~~Ll~lL~~~~~~~~~~~~~~~a~~~L~nl~~~~~~~~~~~~~~~~lp~L~~LL~~~~~~v~~~A~~aL~~L~ 260 (510)
T 3ul1_B 181 VIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLT 260 (510)
T ss_dssp HHHTTCHHHHHHHTCSSCGGGSCHHHHHHHHHHHHHHHCCCSSCCCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHT
T ss_pred HHHcCChHHHHHHHHhccchhhhHHHHHHHHHHHHHHhhcccchhHHHHHHhHHHHHHHHHhcCCHHHHHHHHHHHHHHh
Confidence 45556778888877654311 11111 1222222 22233445678999999999999999988877777776
Q ss_pred hhcCh---hhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCCh---hhHhHHHHHHHHhhccCCCCcchhhHHHHH
Q 004025 401 QSFSA---QVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQ---RTISGSLLKYLSKLQVDEEPAIRTNTTILL 474 (778)
Q Consensus 401 ~~l~~---~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~---~~l~~~LL~~laklq~D~~~~IRtnt~icl 474 (778)
+.-+. ..+...++|.++..+.+.+..+++.+++++-.++..-+. ..+....++.|.+|..++...||-+++-+|
T Consensus 261 ~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~al~aL~nl~~~~~~~~~~i~~~g~l~~L~~LL~~~~~~v~~~A~~aL 340 (510)
T 3ul1_B 261 DGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTM 340 (510)
T ss_dssp SSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGCC-CTTCSSHHHHHHHHHHH
T ss_pred hchhhhHHHHHhcccchhhhhhhcCCChhhhhHHHHHHHHhhcCCHHHHHHHhhccchHHHHHHhcCCCHHHHHHHHHHH
Confidence 54332 245667999999999999999999999999888754322 234556778888888888999999999999
Q ss_pred HHhhhhcccccch----hhhHHHHHhhhhcCCCchhhhheeee-----c--------c----------------CCHHHH
Q 004025 475 GNIASHLNEGTRK----RVLINAFTVRALRDTFSPARGAAKIL-----S--------Y----------------LNCDVR 521 (778)
Q Consensus 475 ~kIa~~L~~~~~~----~vL~~af~~~~lkD~f~~~R~A~l~a-----~--------~----------------~~~~VR 521 (778)
+.|+..- ...++ .-+++.+. +.|++.....|..|..+ . + ++..|+
T Consensus 341 ~nl~a~~-~~~~~~v~~~g~i~~Lv-~lL~~~~~~v~~~Aa~aL~Nl~~~~~~~~~~~L~~~g~i~~L~~LL~~~d~~i~ 418 (510)
T 3ul1_B 341 SNITAGR-QDQIQQVVNHGLVPFLV-GVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKII 418 (510)
T ss_dssp HHHTTSC-HHHHHHHHHTTHHHHHH-HHHHSSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHTTCHHHHHHGGGCSCHHHH
T ss_pred HHHHcCc-HHHHHHHHhcCCHHHHH-HHHcCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHCCCHHHHHHHhcCCCHHHH
Confidence 9998642 22222 23577787 89999999999988777 0 0 788999
Q ss_pred HHHHHHHHHHHHHHH
Q 004025 522 SKAFQAVDQFLQIVK 536 (778)
Q Consensus 522 ~~a~~~~~~~l~~l~ 536 (778)
..+.+++..+++.-+
T Consensus 419 ~~~L~aL~nil~~~~ 433 (510)
T 3ul1_B 419 QVILDAISNIFQAAE 433 (510)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhH
Confidence 999998888876543
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=97.00 E-value=0.00047 Score=75.82 Aligned_cols=74 Identities=14% Similarity=0.058 Sum_probs=42.0
Q ss_pred cCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC----c-hhHHHHHHHHHHHHhcCCC--CC-eeeEeeeeEeccccc
Q 004025 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA----Q-DGHLAAARNGVKRLRTVRH--PN-ILAFLHSTEVENIDA 95 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~----~-~~~~~~~~~ev~~Lk~LrH--Pn-Ilk~~d~~e~e~~~g 95 (778)
+.+|.|. + .||+++...++..|.||....... . ......+..|.+.|+.+.. |. +.+++.. ..+
T Consensus 36 ~~lg~G~~n--~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~-d~~---- 108 (397)
T 2olc_A 36 QEIGDGNLN--YVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS-DTE---- 108 (397)
T ss_dssp EECCSSSSE--EEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE-ETT----
T ss_pred EECCCCceE--EEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE-cCC----
Confidence 4577776 6 799997766678999998653211 0 0112345678888887642 33 3345543 211
Q ss_pred CCcccEEEEEecCCc
Q 004025 96 TSTKITIYIVTEPVM 110 (778)
Q Consensus 96 ~~~~~~lyIVtE~v~ 110 (778)
..+||||++.
T Consensus 109 -----~~~lvmE~l~ 118 (397)
T 2olc_A 109 -----MAVTVMEDLS 118 (397)
T ss_dssp -----TTEEEECCCT
T ss_pred -----ccEEEEEeCC
Confidence 3489999994
|
| >4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0073 Score=62.89 Aligned_cols=155 Identities=11% Similarity=0.120 Sum_probs=109.9
Q ss_pred HHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhh-------cchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChh-
Q 004025 374 LPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDE-------QVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQR- 445 (778)
Q Consensus 374 ~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~-------~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~- 445 (778)
+| +-.-+.+..+..|...++.|..++...+.....+ .+.+.+..++.|+|..+.+.++..+..++..+...
T Consensus 12 lp-l~e~l~sk~WK~R~eale~l~~~~~~~~~~~~~~~~~~~~~~~~~~lkk~l~DsN~~v~~~al~~l~~~~~~~~~~~ 90 (278)
T 4ffb_C 12 LP-LEERLTYKLWKARLEAYKELNQLFRNSVGDISRDDNIQIYWRDPTLFAQYITDSNVVAQEQAIVALNSLIDAFASSS 90 (278)
T ss_dssp CC-HHHHTTCSSHHHHHHHHHHHHHHHHTC----------CCTTSCTHHHHHHTTCSSHHHHHHHHHHHHHHHTTCC---
T ss_pred CC-HHHhcccCcHHHHHHHHHHHHHHHhhCcccccchhHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhhh
Confidence 45 3455678899999999999988887765443322 34566778889999999999999999998876532
Q ss_pred -------hHhHHHHHHH-HhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhhheeee----
Q 004025 446 -------TISGSLLKYL-SKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL---- 513 (778)
Q Consensus 446 -------~l~~~LL~~l-aklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~l~a---- 513 (778)
..-..++|.| .|...|..+.+|..+.-||-.++..... ..+++..+. .+++...+..|.+++..
T Consensus 91 ~~~~~~~~~~~~~l~~lveK~l~~~k~~~~~~a~~~l~~~~~~~~~---~~~~~e~l~-~~l~~Knpkv~~~~l~~l~~~ 166 (278)
T 4ffb_C 91 LKNAHNITLISTWTPLLVEKGLTSSRATTKTQSMSCILSLCGLDTS---ITQSVELVI-PFFEKKLPKLIAAAANCVYEL 166 (278)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHTSSS---SHHHHHHHG-GGGGCSCHHHHHHHHHHHHHH
T ss_pred cccchhHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHhcCc---HHHHHHHHH-HHHhccCHHHHHHHHHHHHHH
Confidence 2234556654 5767899999999999998888765432 234556666 67788888888877665
Q ss_pred --cc------------------------CCHHHHHHHHHHHHHHHH
Q 004025 514 --SY------------------------LNCDVRSKAFQAVDQFLQ 533 (778)
Q Consensus 514 --~~------------------------~~~~VR~~a~~~~~~~l~ 533 (778)
.| .++.||+.|.+++-.+..
T Consensus 167 l~~fg~~~~~~k~~l~~i~~~l~k~l~d~~~~VR~aA~~l~~~ly~ 212 (278)
T 4ffb_C 167 MAAFGLTNVNVQTFLPELLKHVPQLAGHGDRNVRSQTMNLIVEIYK 212 (278)
T ss_dssp HHHHTTTTCCHHHHHHHHGGGHHHHHTCSSHHHHHHHHHHHHHHHT
T ss_pred HHHhCCCcCCchhHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 11 789999999998765543
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0055 Score=64.89 Aligned_cols=59 Identities=7% Similarity=-0.082 Sum_probs=39.3
Q ss_pred EEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCC---CeeeEeeeeEecccccCCcccEEEEEecCC
Q 004025 35 SHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHP---NILAFLHSTEVENIDATSTKITIYIVTEPV 109 (778)
Q Consensus 35 ~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHP---nIlk~~d~~e~e~~~g~~~~~~lyIVtE~v 109 (778)
.+|.. |..+.+|+... ......+.+|++.|+.|.+. .|.+++...... ...-|+|||++
T Consensus 34 ~v~~v-----g~~~VlR~~~~----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~-------~g~~~~v~e~i 95 (306)
T 3tdw_A 34 YAILV-----NGDWVFRFPKS----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRS-------DGNPFVGYRKV 95 (306)
T ss_dssp EEEEE-----TTTEEEEEESS----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECT-------TSCEEEEEECC
T ss_pred eEEEE-----CCEEEEEecCC----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccC-------CCceEEEEecc
Confidence 57766 57788888532 23456788999999999753 245555555422 12568999999
|
| >1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1 | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0026 Score=74.37 Aligned_cols=158 Identities=13% Similarity=0.090 Sum_probs=112.1
Q ss_pred hhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHH
Q 004025 372 KVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSL 451 (778)
Q Consensus 372 ~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~L 451 (778)
...+.+++++.++|-..|-..--.+..|.+. ..++---+...|...+.|.|+.+|..+|++|..+. ...+...|
T Consensus 70 ~~~~~vik~~~s~~~~~Krl~Yl~~~~~~~~--~~e~~~l~in~l~kDL~~~n~~vr~lAL~~L~~i~----~~~~~~~l 143 (618)
T 1w63_A 70 FGQLECLKLIASQKFTDKRIGYLGAMLLLDE--RQDVHLLMTNCIKNDLNHSTQFVQGLALCTLGCMG----SSEMCRDL 143 (618)
T ss_dssp GGHHHHHHHHHSSSHHHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHHSCSSSHHHHHHHHHHHHHC----CHHHHHHH
T ss_pred chHHHHHHHHcCCchHHHHHHHHHHHHHhCC--CcHHHHHHHHHHHHhcCCCCHhHHHHHHHHHHhcC----CHHHHHHH
Confidence 3567778888888877762222234444432 12233346678888899999999999999999887 34567788
Q ss_pred HHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhhheeee--cc--CCHHHHHHHHHH
Q 004025 452 LKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL--SY--LNCDVRSKAFQA 527 (778)
Q Consensus 452 L~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~l~a--~~--~~~~VR~~a~~~ 527 (778)
++.+.++..|..|.||-++++|+++|... .++... -+++.+. ..|.|+.+.++.+|+.+ .. .+++....-.++
T Consensus 144 ~~~l~~~L~~~~~~VRk~A~~al~~l~~~-~p~~v~-~~~~~l~-~lL~D~d~~V~~~Al~~L~~i~~~~~~~~~~~~~~ 220 (618)
T 1w63_A 144 AGEVEKLLKTSNSYLRKKAALCAVHVIRK-VPELME-MFLPATK-NLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKL 220 (618)
T ss_dssp HHHHHHHHHSCCHHHHHHHHHHHHHHHHH-CGGGGG-GGGGGTT-TSTTCCCHHHHHHHHHHHHHHCCSHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHH-ChHHHH-HHHHHHH-HHhCCCCHhHHHHHHHHHHHHHHhChHHHHHHHHH
Confidence 99999999999999999999999999975 344333 4677788 89999999999999888 22 233322222344
Q ss_pred HHHHHHHHHHH
Q 004025 528 VDQFLQIVKQY 538 (778)
Q Consensus 528 ~~~~l~~l~~~ 538 (778)
+..+++.|+..
T Consensus 221 v~~l~~~L~~~ 231 (618)
T 1w63_A 221 VPQLVRILKNL 231 (618)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 55666666654
|
| >2of3_A ZYG-9; multifunctional macromolecule, kinetochore, microtubule, XMAP215, STU2, DIS1, microtubule associated protein, structural protein; 1.90A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0093 Score=61.85 Aligned_cols=110 Identities=10% Similarity=0.090 Sum_probs=90.2
Q ss_pred hhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHH
Q 004025 371 VKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGS 450 (778)
Q Consensus 371 ~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~ 450 (778)
..++|.++.-++.+--.||-..-+-+..+..-.++. +||+.++.|+.+.|...|+.++..|..+++.-+-.. ..
T Consensus 131 ~~~lP~LveKlGd~k~~vR~~~r~il~~l~~v~~~~----~v~~~l~~g~ksKN~R~R~e~l~~l~~li~~~G~~~--~~ 204 (266)
T 2of3_A 131 SAFVPYLLLKTGEAKDNMRTSVRDIVNVLSDVVGPL----KMTPMLLDALKSKNARQRSECLLVIEYYITNAGISP--LK 204 (266)
T ss_dssp HHHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHHCHH----HHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHCSGG--GG
T ss_pred HHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHCCHH----HHHHHHHHHHccCCHHHHHHHHHHHHHHHHhcCCCc--cc
Confidence 567899988888887778866666565555555665 588999999999999999999999999998876553 33
Q ss_pred HH---HHHHhhccCCCCcchhhHHHHHHHhhhhcccccc
Q 004025 451 LL---KYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTR 486 (778)
Q Consensus 451 LL---~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~ 486 (778)
.+ |.++++..|.+..||-.+.-|+..+=.+.++..+
T Consensus 205 ~l~~~~~ia~ll~D~d~~VR~aAl~~lve~y~~~Gd~v~ 243 (266)
T 2of3_A 205 SLSVEKTVAPFVGDKDVNVRNAAINVLVACFKFEGDQMW 243 (266)
T ss_dssp GGCHHHHHGGGGGCSSHHHHHHHHHHHHHHHHHHTTHHH
T ss_pred cccchHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhHHHH
Confidence 67 9999999999999999999999988888876543
|
| >1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0038 Score=66.05 Aligned_cols=139 Identities=13% Similarity=0.147 Sum_probs=107.2
Q ss_pred hHHHHHH-hhcCChHHHHHHHHHhHHHHHhh---cChhhhhhcchHHHHhhcC-CCcHHHHHHHHHHHHhhhccCCh---
Q 004025 373 VLPTIVK-LFASNDRAIRVALLQHIDQYGQS---FSAQVVDEQVYPHVATGFA-DTSAFLREMTLKSMLVLAPKLSQ--- 444 (778)
Q Consensus 373 i~P~i~~-lF~~~Dr~iR~~LL~~l~~~~~~---l~~~~v~~~I~P~l~~gf~-Dt~~~iRe~tlksi~~l~pkL~~--- 444 (778)
.+|.++. +..+++..||...+.-|-.+... ....+++...+|.|+..+. +.+..+|+.++.+|..++---..
T Consensus 82 ~l~~Lv~~lL~s~~~~vr~~Aa~~Lg~ia~~n~~~~~~vv~~g~l~~Ll~LL~~~~~~~v~~~A~~ALsnl~~~~~~~~~ 161 (296)
T 1xqr_A 82 GMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLL 161 (296)
T ss_dssp HHHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred CHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcCCcHHHH
Confidence 4677777 88888888887777777766643 3345677788999999998 46899999999999988743222
Q ss_pred hhHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhh----hHHHHHhhhhcCCCchhhhheeee
Q 004025 445 RTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRV----LINAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 445 ~~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~v----L~~af~~~~lkD~f~~~R~A~l~a 513 (778)
..+....++.|.++..+.++.+|.+++-+|+.|+.. +.+.+..+ .++.+. ..|+.+....|..++.+
T Consensus 162 ~~~~~ggi~~L~~lL~~~d~~v~~~A~~aLs~L~~~-~~~~~~~vv~~g~i~~Lv-~LL~~~d~~v~~~al~a 232 (296)
T 1xqr_A 162 QFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVG-HPEHKGTLCSMGMVQQLV-ALVRTEHSPFHEHVLGA 232 (296)
T ss_dssp HHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHH-CGGGHHHHHHTTHHHHHH-HHHTSCCSTHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhC-ChHHHHHHHHcCCHHHHH-HHHcCCChhHHHHHHHH
Confidence 233446788888888888999999999999999987 55554444 467777 88999999999998888
|
| >1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1 | Back alignment and structure |
|---|
Probab=96.36 E-value=0.029 Score=65.46 Aligned_cols=128 Identities=16% Similarity=0.196 Sum_probs=99.0
Q ss_pred hhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhH
Q 004025 368 EFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTI 447 (778)
Q Consensus 368 ef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l 447 (778)
+........+.++..+.|..+|+..|..|..++.+-+ +.+. ..++.++..+.|.+..||..++..+..++..=+-..+
T Consensus 309 ~l~~~a~~~L~~~L~~~d~~vr~~aL~~L~~i~~~~p-~~~~-~~~~~i~~~l~d~d~~Ir~~alelL~~l~~~~nv~~i 386 (618)
T 1w63_A 309 GLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDH-NAVQ-RHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNIRGM 386 (618)
T ss_dssp HHHHHHHHHHHHHHTCSSTTTHHHHHHHHHHHHHHHH-HHHG-GGHHHHHHGGGSSCHHHHHHHHHHHHHHCCSSSTHHH
T ss_pred HHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHhhCH-HHHH-HHHHHHHHHccCCChhHHHHHHHHHHHHcccccHHHH
Confidence 3334567888888888999999999999999998744 3343 3667889999999999999999999999887665666
Q ss_pred hHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCc
Q 004025 448 SGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFS 504 (778)
Q Consensus 448 ~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~ 504 (778)
..+|+.++. +.+..+|..++.+||++|....+.. . -.++.+. ..|++.-.
T Consensus 387 v~eL~~~l~----~~d~e~r~~~v~~I~~la~k~~~~~-~-~~v~~ll-~lL~~~~~ 436 (618)
T 1w63_A 387 MKELLYFLD----SCEPEFKADCASGIFLAAEKYAPSK-R-WHIDTIM-RVLTTAGS 436 (618)
T ss_dssp HHHHHHHHH----HCCHHHHHHHHHHHHHHHHSSCCCH-H-HHHHHHH-HHHHHTGG
T ss_pred HHHHHHHHH----hCCHHHHHHHHHHHHHHHHHhCccH-H-HHHHHHH-HHHHhccc
Confidence 677777765 4668999999999999999875432 2 2355666 67776543
|
| >1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16 | Back alignment and structure |
|---|
Probab=96.24 E-value=0.0042 Score=56.88 Aligned_cols=88 Identities=17% Similarity=0.186 Sum_probs=71.2
Q ss_pred HHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHHHH
Q 004025 374 LPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLK 453 (778)
Q Consensus 374 ~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~LL~ 453 (778)
+|.+++++.++|..||...+.-|-.+.+ ...+|.+...+.|.++.||..++.++-.+. ..+.++
T Consensus 44 ~~~L~~~L~d~~~~vR~~A~~aL~~~~~--------~~a~~~L~~~L~d~~~~VR~~A~~aL~~~~--------~~~a~~ 107 (131)
T 1te4_A 44 FEPLLESLSNEDWRIRGAAAWIIGNFQD--------ERAVEPLIKLLEDDSGFVRSGAARSLEQIG--------GERVRA 107 (131)
T ss_dssp HHHHHHGGGCSCHHHHHHHHHHHGGGCS--------HHHHHHHHHHHHHCCTHHHHHHHHHHHHHC--------SHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHhcCC--------HHHHHHHHHHHcCCCHHHHHHHHHHHHHhC--------cHHHHH
Confidence 4889999999999999888876654432 235788899999999999999999998765 234567
Q ss_pred HHHhhccCCCCcchhhHHHHHHHh
Q 004025 454 YLSKLQVDEEPAIRTNTTILLGNI 477 (778)
Q Consensus 454 ~laklq~D~~~~IRtnt~icl~kI 477 (778)
.|.++..|+++.||..++.+|++|
T Consensus 108 ~L~~~l~d~~~~vr~~A~~aL~~i 131 (131)
T 1te4_A 108 AMEKLAETGTGFARKVAVNYLETH 131 (131)
T ss_dssp HHHHHTTSCCTHHHHHHHHHGGGC
T ss_pred HHHHHHhCCCHHHHHHHHHHHHhC
Confidence 777777899999999999998875
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=96.24 E-value=0.024 Score=59.98 Aligned_cols=32 Identities=13% Similarity=0.105 Sum_probs=28.4
Q ss_pred CCCccccccCCCCeEEcCCCcEEEEecccccc
Q 004025 147 DCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (778)
Q Consensus 147 ~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~ 178 (778)
...++|||+++.||+++.++.+.|+||+.+..
T Consensus 221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp SCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred cCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 46799999999999998888999999998653
|
| >2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A | Back alignment and structure |
|---|
Probab=96.15 E-value=0.025 Score=66.03 Aligned_cols=161 Identities=16% Similarity=0.163 Sum_probs=115.4
Q ss_pred hhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhc--CCCcHHHHHHHHHHHHhhhccCCh
Q 004025 367 EEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGF--ADTSAFLREMTLKSMLVLAPKLSQ 444 (778)
Q Consensus 367 eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf--~Dt~~~iRe~tlksi~~l~pkL~~ 444 (778)
.|....++..|.+-+.+++.-+|-..|.-|..+.. .++-+.+.|.+..++ .|.++.||..++-++..+.. ++.
T Consensus 106 ~e~~~L~iN~l~kDl~~~n~~ir~lALr~L~~i~~----~e~~~~l~~~v~~~l~~~d~~~~VRK~A~~al~kl~~-~~p 180 (621)
T 2vgl_A 106 SELIRLINNAIKNDLASRNPTFMGLALHCIANVGS----REMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYR-TSP 180 (621)
T ss_dssp HHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHCC----HHHHHHHTTHHHHHHHCSSSCHHHHHHHHHHHHHHHH-HCG
T ss_pred cHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhccCC----HHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHH-hCh
Confidence 34555677888888899999999999988877743 346677999999999 99999999999999998887 444
Q ss_pred hhHh-HHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhc-------------------CCCc
Q 004025 445 RTIS-GSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALR-------------------DTFS 504 (778)
Q Consensus 445 ~~l~-~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lk-------------------D~f~ 504 (778)
..+. +.++..|.++..|.+++|+.+++..|..|++.=.... .-+++.+. +.|+ ||+.
T Consensus 181 ~~~~~~~~~~~l~~lL~d~d~~V~~~a~~~l~~i~~~~~~~~--~~~~~~~~-~~L~~ll~~~~~~~~~~~~~~~~~~w~ 257 (621)
T 2vgl_A 181 DLVPMGDWTSRVVHLLNDQHLGVVTAATSLITTLAQKNPEEF--KTSVSLAV-SRLSRIVTSASTDLQDYTYYFVPAPWL 257 (621)
T ss_dssp GGCCCCSCHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCHHHH--TTHHHHHH-HHHHHHHHCCSSSCSTTEETTEESHHH
T ss_pred hhcCchhHHHHHHHHhCCCCccHHHHHHHHHHHHHHhChHHH--HHHHHHHH-HHHHHHHhCCCCCccchhhcCCCCchH
Confidence 4433 3688888888899999999999999999987532211 11333333 3222 5565
Q ss_pred hhhhheeeecc---CCHHHHHHHHHHHHHHHHHH
Q 004025 505 PARGAAKILSY---LNCDVRSKAFQAVDQFLQIV 535 (778)
Q Consensus 505 ~~R~A~l~a~~---~~~~VR~~a~~~~~~~l~~l 535 (778)
.+++--+.+.| .++..++.-.+.++.++..+
T Consensus 258 qi~il~ll~~~~~~~d~~~~~~l~~~L~~il~~~ 291 (621)
T 2vgl_A 258 SVKLLRLLQCYPPPEDPAVRGRLTECLETILNKA 291 (621)
T ss_dssp HHHHHHHGGGSSSCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhh
Confidence 55555555444 35777777667777766554
|
| >2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.08 E-value=0.14 Score=59.58 Aligned_cols=205 Identities=11% Similarity=0.082 Sum_probs=126.4
Q ss_pred CChhhHhHhhhhchhhhcCCChhh--h-hhchHHHHHHHHhhCCCCc---hhhHHHHHhccCCC-h-hhhhhhhHHHHHH
Q 004025 308 KDSVEKDTFFRKLPNLAEQLPRQI--V-LKKLLPLLASALEFGSAAA---PALTALLKMGSWLS-T-EEFSVKVLPTIVK 379 (778)
Q Consensus 308 k~~~EK~~F~~~L~~~l~~fp~~~--~-~~kILP~Ll~~~~~~~~~~---~~L~~llki~~~l~-~-eef~~~i~P~i~~ 379 (778)
.+..-|..-...|..+....+... . ...++|.|++.+..+.... .++..+..++..-. . .-+..-++|.++.
T Consensus 26 ~~~~vr~~A~~~L~~La~~~~~~~~i~~~~~~i~~Lv~~L~~~~~~~~~~~A~~~L~~Ls~~~~~~~~i~~~g~i~~Lv~ 105 (644)
T 2z6h_A 26 EDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVK 105 (644)
T ss_dssp SCHHHHHHHHHHHHHHHTSTTHHHHHTTCHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSHHHHHHHHTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHCCChhHHHHHhccChHHHHHHHHhcCCCHHHHHHHHHHHHHHhcChhhHHHHHHcCCHHHHHH
Confidence 344445444444444444333221 1 2257888888887542211 12222333332211 1 1234457899999
Q ss_pred hhcCChHHHHHHHHHhHHHHHhhcC---hhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhcc---------------
Q 004025 380 LFASNDRAIRVALLQHIDQYGQSFS---AQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPK--------------- 441 (778)
Q Consensus 380 lF~~~Dr~iR~~LL~~l~~~~~~l~---~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pk--------------- 441 (778)
++.+.+..+|...+.-|..+...-+ ...+...++|.++..+.+.++.++..++.++..++-.
T Consensus 106 lL~~~~~~v~~~A~~aL~nL~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~La~~~~~~~~~i~~~g~v~ 185 (644)
T 2z6h_A 106 MLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQ 185 (644)
T ss_dssp HTTCSSHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHH
T ss_pred HHhCCCHHHHHHHHHHHHHHHhCcchhHHHHHHCCChHHHHHHHCcCCHHHHHHHHHHHHHHHhcCcHHHHHHHHcCChH
Confidence 9999999888877777777765532 2334577889999999888887777665555444321
Q ss_pred -----CC-------------------------hhhHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhH
Q 004025 442 -----LS-------------------------QRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLI 491 (778)
Q Consensus 442 -----L~-------------------------~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~ 491 (778)
|. ...+....++.|.++..+....+|-+++-+|..|+..-......+-++
T Consensus 186 ~Lv~lL~~~~~~~~~~~a~~~L~nLs~~~~~~~~l~~~g~l~~L~~ll~~~~~~~~~~a~~~L~nL~~~~~~~~~~~~~i 265 (644)
T 2z6h_A 186 ALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLL 265 (644)
T ss_dssp HHHHHHTTCCCHHHHHHHHHHHHHHTTCTTHHHHHHHTTHHHHHHTTTTCSCHHHHHHHHHHHHHHGGGCTTCCSCHHHH
T ss_pred HHHHHHHcCChHHHHHHHHHHHHHHhcCcccHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHhhcchhhhhhhhHH
Confidence 10 111222356777777777778899999999999987654333334568
Q ss_pred HHHHhhhhcCCCchhhhheeee
Q 004025 492 NAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 492 ~af~~~~lkD~f~~~R~A~l~a 513 (778)
+.+. +.|++.....|..+..+
T Consensus 266 ~~Lv-~lL~~~d~~v~~~a~~a 286 (644)
T 2z6h_A 266 GTLV-QLLGSDDINVVTCAAGI 286 (644)
T ss_dssp HHHH-HHTTCSCHHHHHHHHHH
T ss_pred HHHH-HHHcCCCHHHHHHHHHH
Confidence 8888 89999998888887776
|
| >1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* | Back alignment and structure |
|---|
Probab=96.05 E-value=0.017 Score=61.15 Aligned_cols=214 Identities=14% Similarity=0.072 Sum_probs=140.5
Q ss_pred hhHhHhhhhchhhhcCCCh--hhhhhchHHHHHH-HHhhCCCCchhhHH-HHHhccCCC-hhhh-----hhhhHHHHHHh
Q 004025 311 VEKDTFFRKLPNLAEQLPR--QIVLKKLLPLLAS-ALEFGSAAAPALTA-LLKMGSWLS-TEEF-----SVKVLPTIVKL 380 (778)
Q Consensus 311 ~EK~~F~~~L~~~l~~fp~--~~~~~kILP~Ll~-~~~~~~~~~~~L~~-llki~~~l~-~eef-----~~~i~P~i~~l 380 (778)
++|..-+..|..++++... .|++.-.+|.|+. .+.... +.+-.. ...+|.-.. .+++ ..-.+|.++++
T Consensus 55 e~k~~Al~~L~~lv~~~dna~~~~~~G~l~~Lv~~lL~s~~--~~vr~~Aa~~Lg~ia~~n~~~~~~vv~~g~l~~Ll~L 132 (296)
T 1xqr_A 55 QEREGALELLADLCENMDNAADFCQLSGMHLLVGRYLEAGA--AGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRL 132 (296)
T ss_dssp HHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHTTTTCSS--HHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhChhhHHHHHHcCCHHHHHHHHHcCCC--HHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHH
Confidence 5777777788887776543 4666678899988 665432 122221 222222111 1222 23478999999
Q ss_pred hcC-ChHHHHHHHHHhHHHHHhhcCh---hhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhcc---CChhhHhHHHHH
Q 004025 381 FAS-NDRAIRVALLQHIDQYGQSFSA---QVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPK---LSQRTISGSLLK 453 (778)
Q Consensus 381 F~~-~Dr~iR~~LL~~l~~~~~~l~~---~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pk---L~~~~l~~~LL~ 453 (778)
+.+ ++..+|-..+--|..++..-++ ..+....+|.++..+.+.+..+|..++.++..++.. .-...+...++|
T Consensus 133 L~~~~~~~v~~~A~~ALsnl~~~~~~~~~~~~~~ggi~~L~~lL~~~d~~v~~~A~~aLs~L~~~~~~~~~~vv~~g~i~ 212 (296)
T 1xqr_A 133 LDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQ 212 (296)
T ss_dssp HHHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHH
T ss_pred HccCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCChHHHHHHHHcCCHH
Confidence 985 5788888887777777765443 345567999999999999999999999999888744 222345667899
Q ss_pred HHHhhccCCCCcchhhHHHHHHHhhhhcccccchh--hhHHHHHhhhhcCCCchhhhheeeecc-CCHHHHHHHHHHHHH
Q 004025 454 YLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKR--VLINAFTVRALRDTFSPARGAAKILSY-LNCDVRSKAFQAVDQ 530 (778)
Q Consensus 454 ~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~--vL~~af~~~~lkD~f~~~R~A~l~a~~-~~~~VR~~a~~~~~~ 530 (778)
.|..|...+++.||..++-+|+.|+.. .+..+.. ...+.|. ..|+. |+-.|+. . ...++++.|++.++.
T Consensus 213 ~Lv~LL~~~d~~v~~~al~aL~~l~~~-~~~~~~~~~~~~~~l~-~lL~~-----~~~~lq~-~e~~~e~~~~~~~il~~ 284 (296)
T 1xqr_A 213 QLVALVRTEHSPFHEHVLGALCSLVTD-FPQGVRECREPELGLE-ELLRH-----RCQLLQQ-HEEYQEELEFCEKLLQT 284 (296)
T ss_dssp HHHHHHTSCCSTHHHHHHHHHHHHHTT-CHHHHHHHHCGGGCHH-HHHHH-----HHHHHTT-CGGGHHHHHHHHHHHHH
T ss_pred HHHHHHcCCChhHHHHHHHHHHHHHhC-ChhHHHHHhccHHHHH-HHHHH-----HHHHccc-hHHHHHHHHHHHHHHHH
Confidence 999998888999999999999999977 2222111 0111222 22322 1222221 1 247889999999999
Q ss_pred HHHH
Q 004025 531 FLQI 534 (778)
Q Consensus 531 ~l~~ 534 (778)
|...
T Consensus 285 ~f~~ 288 (296)
T 1xqr_A 285 CFSS 288 (296)
T ss_dssp HCC-
T ss_pred HcCC
Confidence 8853
|
| >2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A | Back alignment and structure |
|---|
Probab=95.92 E-value=0.011 Score=69.23 Aligned_cols=133 Identities=13% Similarity=0.092 Sum_probs=103.4
Q ss_pred hHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHHH
Q 004025 373 VLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLL 452 (778)
Q Consensus 373 i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~LL 452 (778)
..+.+++++.++|-..|=..--.+..|.+.- ++ +---+...+...+.|.|+.+|..+|++|..+. ...+...|+
T Consensus 75 ~~~~vvkl~~s~~~~~Krl~YL~l~~~~~~~-~e-~~~L~iN~l~kDl~~~n~~ir~lALr~L~~i~----~~e~~~~l~ 148 (621)
T 2vgl_A 75 GHMEAVNLLSSNRYTEKQIGYLFISVLVNSN-SE-LIRLINNAIKNDLASRNPTFMGLALHCIANVG----SREMAEAFA 148 (621)
T ss_dssp CHHHHHHGGGCSCHHHHHHHHHHHHHSCCCC-HH-HHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHC----CHHHHHHHT
T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHccCC-cH-HHHHHHHHHHHhcCCCCHHHHHHHHHHhhccC----CHHHHHHHH
Confidence 4577888999988877644443444444322 22 22335677888999999999999999999886 356788999
Q ss_pred HHHHhhc--cCCCCcchhhHHHHHHHhhhhcccccch-hhhHHHHHhhhhcCCCchhhhheeee
Q 004025 453 KYLSKLQ--VDEEPAIRTNTTILLGNIASHLNEGTRK-RVLINAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 453 ~~laklq--~D~~~~IRtnt~icl~kIa~~L~~~~~~-~vL~~af~~~~lkD~f~~~R~A~l~a 513 (778)
+.+.++. .|..|.||-++++|+.||.. ++++... .-+++.+. +.|.|+.+-++.+|+.+
T Consensus 149 ~~v~~~l~~~d~~~~VRK~A~~al~kl~~-~~p~~~~~~~~~~~l~-~lL~d~d~~V~~~a~~~ 210 (621)
T 2vgl_A 149 GEIPKILVAGDTMDSVKQSAALCLLRLYR-TSPDLVPMGDWTSRVV-HLLNDQHLGVVTAATSL 210 (621)
T ss_dssp THHHHHHHCSSSCHHHHHHHHHHHHHHHH-HCGGGCCCCSCHHHHH-HHTTCSCHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCHHHHHHHHHHHHHHHH-hChhhcCchhHHHHHH-HHhCCCCccHHHHHHHH
Confidence 9999998 89999999999999999998 4444433 36788888 89999999999999887
|
| >2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} | Back alignment and structure |
|---|
Probab=95.88 E-value=0.013 Score=70.25 Aligned_cols=197 Identities=14% Similarity=0.050 Sum_probs=127.0
Q ss_pred hhhhchHHHHHHHHhhCCC--CchhhHHHHHhccCCChhhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcC---h
Q 004025 331 IVLKKLLPLLASALEFGSA--AAPALTALLKMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFS---A 405 (778)
Q Consensus 331 ~~~~kILP~Ll~~~~~~~~--~~~~L~~llki~~~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~---~ 405 (778)
++...++|.|+..+..... ...++..+..++......+-...++|.|++++.+.|..+|...+.-|..+...-+ .
T Consensus 356 i~~~g~l~~Ll~lL~~~~~~~~~~a~~~L~~L~~~~~~~~~~~~~i~~Lv~lL~~~d~~vr~~A~~aL~~L~~~~~~~~~ 435 (780)
T 2z6g_A 356 IVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKM 435 (780)
T ss_dssp HHHTTHHHHHGGGTTCSCHHHHHHHHHHHHHHHTTCTTCSCCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHH
T ss_pred HHHhchHHHHHHHHcCCchHHHHHHHHHHHHHhccchhhhhhhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHH
Confidence 3444567777776654321 1112333444554443333345789999999999999999877777766655321 2
Q ss_pred hhhhhcchHHHHhhcCCC-c-HHHHHHHHHHHHhhhccCCh------hhHhHHHHHHHHhhccCCCC-cchhhHHHHHHH
Q 004025 406 QVVDEQVYPHVATGFADT-S-AFLREMTLKSMLVLAPKLSQ------RTISGSLLKYLSKLQVDEEP-AIRTNTTILLGN 476 (778)
Q Consensus 406 ~~v~~~I~P~l~~gf~Dt-~-~~iRe~tlksi~~l~pkL~~------~~l~~~LL~~laklq~D~~~-~IRtnt~icl~k 476 (778)
..+....+|.++..+.+. + ..+|+.++.++-.|+..-.+ ..+....++.|.++..++.. .||..++-+|++
T Consensus 436 ~i~~~g~i~~Lv~lL~~~~~~~~v~~~Al~aL~nL~~~~~~~~~~~~~v~~~~~l~~L~~lL~~~~~~~v~~~A~~aL~n 515 (780)
T 2z6g_A 436 MVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQDAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRN 515 (780)
T ss_dssp HHHTTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSSTTHHHHHHHHHHTTCHHHHHHTTSTTCCHHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHccCCHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHcCCHHHHHHHhcCCChHHHHHHHHHHHHH
Confidence 234456789999888763 2 48999999999988754333 22344567888888776665 999999999999
Q ss_pred hhhhcccccch----hhhHHHHHhhhhcCCCchhhhheeee--c--c----CCHHHHHHHHHHHHH
Q 004025 477 IASHLNEGTRK----RVLINAFTVRALRDTFSPARGAAKIL--S--Y----LNCDVRSKAFQAVDQ 530 (778)
Q Consensus 477 Ia~~L~~~~~~----~vL~~af~~~~lkD~f~~~R~A~l~a--~--~----~~~~VR~~a~~~~~~ 530 (778)
|+. +...+. .-+++.+. +.|++.....|..+..+ . + ...+||..|-.++..
T Consensus 516 La~--~~~~~~~i~~~g~i~~Lv-~lL~~~~~~~~~~aa~al~nq~~~~~~~~~~v~~~a~~aL~~ 578 (780)
T 2z6g_A 516 LAL--CPANHAPLREQGAIPRLV-QLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEACTGALHI 578 (780)
T ss_dssp HHS--SHHHHHHHHHTTHHHHHH-HHHHHHHHHHHHTTC------CCSTTCCHHHHHHHHHHHHHH
T ss_pred Hhc--CHHHHHHHHHCCCHHHHH-HHHHhcchhHHHHHhhccccchhhcccChHHHHHHHHHHHHH
Confidence 995 333332 23477788 88888776666654443 1 2 234566665555554
|
| >1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A | Back alignment and structure |
|---|
Probab=95.78 E-value=0.017 Score=64.98 Aligned_cols=181 Identities=14% Similarity=0.052 Sum_probs=118.9
Q ss_pred hhhhhchHHHHHHHHhhCCC--CchhhHHHHHhccCCChhhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhc---C
Q 004025 330 QIVLKKLLPLLASALEFGSA--AAPALTALLKMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSF---S 404 (778)
Q Consensus 330 ~~~~~kILP~Ll~~~~~~~~--~~~~L~~llki~~~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l---~ 404 (778)
.+....++|.|++.+...+. ...++..+..++......+....++|.+++++.+.|..+|...+.-|..+...- -
T Consensus 222 ~~~~~g~~~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~L~~~~~~~~ 301 (529)
T 1jdh_A 222 AIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNK 301 (529)
T ss_dssp HHHHTTHHHHHHTTTTSSCHHHHHHHHHHHHHHHTTCTTCSCCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTTCHHHH
T ss_pred HHHHCCCHHHHHHHHhCCChHHHHHHHHHHHHHhcCChhhHHHHhHHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHH
Confidence 34445677888777654421 011222333444444444445678999999999999999987776666665431 2
Q ss_pred hhhhhhcchHHHHhhcCC--CcHHHHHHHHHHHHhhhccCCh------hhHhHHHHHHHHhhccCCC-CcchhhHHHHHH
Q 004025 405 AQVVDEQVYPHVATGFAD--TSAFLREMTLKSMLVLAPKLSQ------RTISGSLLKYLSKLQVDEE-PAIRTNTTILLG 475 (778)
Q Consensus 405 ~~~v~~~I~P~l~~gf~D--t~~~iRe~tlksi~~l~pkL~~------~~l~~~LL~~laklq~D~~-~~IRtnt~icl~ 475 (778)
...++...+|.++..+.+ .++.+|+.++.++-.++..-.+ ..+....++.|.++..++. +.||..++-+|+
T Consensus 302 ~~~~~~~~v~~L~~ll~~~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~i~~~~~i~~L~~lL~~~~~~~v~~~a~~~l~ 381 (529)
T 1jdh_A 302 MMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIR 381 (529)
T ss_dssp HHHHHTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTTCHHHHHHTTSTTCCHHHHHHHHHHHH
T ss_pred HHHHHcCChHHHHHHHHccCCHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHcCChhHHHHHhccccchHHHHHHHHHHH
Confidence 233445678888888865 3479999999999988764332 2334456888888888776 499999999999
Q ss_pred Hhhhhcccccchhh----hHHHHHhhhhcCCCchhhhheeee
Q 004025 476 NIASHLNEGTRKRV----LINAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 476 kIa~~L~~~~~~~v----L~~af~~~~lkD~f~~~R~A~l~a 513 (778)
+|+.. ...+..+ +++.+. ..|+|+....|..+..+
T Consensus 382 nl~~~--~~~~~~~~~~~~i~~L~-~ll~~~~~~v~~~a~~~ 420 (529)
T 1jdh_A 382 NLALC--PANHAPLREQGAIPRLV-QLLVRAHQDTQRRTSMG 420 (529)
T ss_dssp HHTTS--GGGHHHHHHTTHHHHHH-HHHHHHHHHHC------
T ss_pred HHhcC--hhhhHHHHHcCCHHHHH-HHHHHHhHHHHHHHhcc
Confidence 99963 3344333 367777 88999888888876654
|
| >2of3_A ZYG-9; multifunctional macromolecule, kinetochore, microtubule, XMAP215, STU2, DIS1, microtubule associated protein, structural protein; 1.90A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=95.72 E-value=0.059 Score=55.83 Aligned_cols=129 Identities=12% Similarity=0.170 Sum_probs=68.8
Q ss_pred HHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhh--cchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhh--H----h
Q 004025 377 IVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDE--QVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRT--I----S 448 (778)
Q Consensus 377 i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~--~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~--l----~ 448 (778)
...||+ .|..-|+..++.|...++.-+...+.. -||..+...|.|+|+.+-..+|..+..++..|.++. + -
T Consensus 52 ~~~lfs-~d~k~~~~ale~L~~~l~~~~~~~~~~lDll~kw~~lr~~d~N~~v~~~~L~~L~~l~~~l~~~~y~~~~~ea 130 (266)
T 2of3_A 52 MSQLFH-KDFKQHLAALDSLVRLADTSPRSLLSNSDLLLKWCTLRFFETNPAALIKVLELCKVIVELIRDTETPMSQEEV 130 (266)
T ss_dssp HHHHTC-SCHHHHHHHHHHHHHHHHHCHHHHHHTHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCCHHHH
T ss_pred HHHhcC-CCHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhccccchHHHH
Confidence 334443 366666666666666655433332211 146665556667777777777776666665554321 1 2
Q ss_pred HHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhhhee
Q 004025 449 GSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAK 511 (778)
Q Consensus 449 ~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~l 511 (778)
+.+||+|..=..|....||...--+|..|....+++. +.+.+. ..++...+.+|...|
T Consensus 131 ~~~lP~LveKlGd~k~~vR~~~r~il~~l~~v~~~~~----v~~~l~-~g~ksKN~R~R~e~l 188 (266)
T 2of3_A 131 SAFVPYLLLKTGEAKDNMRTSVRDIVNVLSDVVGPLK----MTPMLL-DALKSKNARQRSECL 188 (266)
T ss_dssp HHHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHHCHHH----HHHHHH-HGGGCSCHHHHHHHH
T ss_pred HHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHCCHHH----HHHHHH-HHHccCCHHHHHHHH
Confidence 4566665443366666677776666666555433322 223333 344555566665544
|
| >1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A | Back alignment and structure |
|---|
Probab=95.61 E-value=0.25 Score=55.41 Aligned_cols=178 Identities=11% Similarity=0.084 Sum_probs=117.1
Q ss_pred chHHHHHHHHhhCCCCc---hhhHHHHHhccCCC-h-hhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcC---hh
Q 004025 335 KLLPLLASALEFGSAAA---PALTALLKMGSWLS-T-EEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFS---AQ 406 (778)
Q Consensus 335 kILP~Ll~~~~~~~~~~---~~L~~llki~~~l~-~-eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~---~~ 406 (778)
.++|.|++.+..+.... .++..+..++..-. . .-+....+|.++.++.+.|..++...+.-|..+...-+ ..
T Consensus 59 ~~i~~Lv~~L~~~~~~~~~~~a~~~L~~ls~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 138 (529)
T 1jdh_A 59 QMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMA 138 (529)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTHHHH
T ss_pred chHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCchhHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcchHHH
Confidence 47788888776542211 12223334433211 1 11334578999999999999888777777777665432 23
Q ss_pred hhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhcc--------------------CC-----------------------
Q 004025 407 VVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPK--------------------LS----------------------- 443 (778)
Q Consensus 407 ~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pk--------------------L~----------------------- 443 (778)
.+...++|.++..+.+.+..+|+.++.++..++-. |.
T Consensus 139 i~~~g~i~~L~~ll~~~~~~~~~~~~~~L~~la~~~~~~~~~i~~~~~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~~~~ 218 (529)
T 1jdh_A 139 VRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSS 218 (529)
T ss_dssp HHHHTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSTT
T ss_pred HHHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHHhCChHHHHHHHHHHHHHHhcCcc
Confidence 34567889999999998888888765555433321 00
Q ss_pred --hhhHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhhheeee
Q 004025 444 --QRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 444 --~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~l~a 513 (778)
...+....++.|.++..+..+.+|.+++-+|..|+..........-+++.+. +.|+++....|..++.+
T Consensus 219 ~~~~~~~~g~~~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~i~~L~-~ll~~~~~~v~~~a~~~ 289 (529)
T 1jdh_A 219 NKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLV-QLLGSDDINVVTCAAGI 289 (529)
T ss_dssp HHHHHHHTTHHHHHHTTTTSSCHHHHHHHHHHHHHHHTTCTTCSCCHHHHHHHH-HHTTCSCHHHHHHHHHH
T ss_pred cHHHHHHCCCHHHHHHHHhCCChHHHHHHHHHHHHHhcCChhhHHHHhHHHHHH-HHHcCCCHHHHHHHHHH
Confidence 1112234567777777777888999999999999987654333345688888 89999999999888776
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=95.56 E-value=0.083 Score=52.99 Aligned_cols=140 Identities=11% Similarity=-0.051 Sum_probs=87.5
Q ss_pred CcChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCC
Q 004025 109 VMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANG 188 (778)
Q Consensus 109 v~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~ 188 (778)
+.+|.+.|+.++.. ..++.++..++|.+.+|.-+-....-..+=+.|.+|++..+|.+-+.+ .... .
T Consensus 32 ~vSL~eIL~~~~~P--lsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~--~-------- 98 (229)
T 2yle_A 32 ALSLEEILRLYNQP--INEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADD--A-------- 98 (229)
T ss_dssp EEEHHHHHHHHTSC--CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred cccHHHHHHHcCCC--cCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-cccc--c--------
Confidence 35799999887643 345556667999999988772112212334557999999999988653 1100 0
Q ss_pred CccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhccCCCCcchHHHHHHHhcc--
Q 004025 189 PMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASIPKSLLPDYQRLLSS-- 266 (778)
Q Consensus 189 ~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~~~~iP~~L~~~i~~lL~~-- 266 (778)
....+.|||.... ....+.=|||||++||..+--+.+-+. -..+++.|-.++..|.+.
T Consensus 99 --------~~~~~~~pe~~~~-------~~te~~~IysLG~tLY~ALDygL~e~e-----E~eLS~~LE~LL~~Mt~~~~ 158 (229)
T 2yle_A 99 --------GEPPPVAGKLGYS-------QCMETEVIESLGIIIYKALDYGLKENE-----ERELSPPLEQLIDHMANTVE 158 (229)
T ss_dssp ----------------CCSSS-------SSCHHHHHHHHHHHHHHHHTTTCCTTE-----EECCCHHHHHHHHHHTTCCC
T ss_pred --------cccCCCChhhccc-------cchHHHHHHHHHHHHHHHhhcCCCccc-----chhhCHHHHHHHHHHHhccc
Confidence 0124568887532 334577899999999999874432211 135677788888888755
Q ss_pred -----------------------CCCCCCChHHHHhcc
Q 004025 267 -----------------------MPSRRLNSSKLIENS 281 (778)
Q Consensus 267 -----------------------dP~~Rps~~~lL~~~ 281 (778)
.+..|.++.++|+.|
T Consensus 159 d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~~C 196 (229)
T 2yle_A 159 ADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMKLC 196 (229)
T ss_dssp --------------------CCSCCCCCCSHHHHHHHH
T ss_pred ccccccccccccccccccccccccccCcCCHHHHHHHH
Confidence 245778888888776
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=95.40 E-value=0.036 Score=61.28 Aligned_cols=31 Identities=26% Similarity=0.226 Sum_probs=27.3
Q ss_pred CCCccccccCCCCeEEcCCCcEEEEecccccc
Q 004025 147 DCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (778)
Q Consensus 147 ~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~ 178 (778)
...++|||+++.||+++.++ ++|+||+.+..
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~ 261 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFY 261 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence 46799999999999999877 99999998764
|
| >2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A | Back alignment and structure |
|---|
Probab=95.25 E-value=0.26 Score=59.95 Aligned_cols=170 Identities=12% Similarity=0.194 Sum_probs=103.2
Q ss_pred HHHhccCCChhhhhhhhHHHHHHhhcCC-hHHHHHHHHHhHHHHHhhcChhhhhhc---chHHHHhhcCCCcHHHHHHHH
Q 004025 357 LLKMGSWLSTEEFSVKVLPTIVKLFASN-DRAIRVALLQHIDQYGQSFSAQVVDEQ---VYPHVATGFADTSAFLREMTL 432 (778)
Q Consensus 357 llki~~~l~~eef~~~i~P~i~~lF~~~-Dr~iR~~LL~~l~~~~~~l~~~~v~~~---I~P~l~~gf~Dt~~~iRe~tl 432 (778)
+..|...++.+-- ..++|.|+..+... .++.++..|.-|..+++.. ++.+... |+|.+..++-|+-+.|..+..
T Consensus 119 ~~~~~~~~~~~a~-~~~~~~~~~~~~~~~kw~~k~~~l~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~d~k~~v~~~~~ 196 (986)
T 2iw3_A 119 LISIVNAVNPVAI-KALLPHLTNAIVETNKWQEKIAILAAFSAMVDAA-KDQVALRMPELIPVLSETMWDTKKEVKAAAT 196 (986)
T ss_dssp HHHHHHHSCGGGH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHTTCSSHHHHHHHH
T ss_pred HHHHHHhCCHHHH-HHHHHHHHHHhccccchHHHHHHHHHHHHHHHHh-HHHHHHhccchhcchHhhcccCcHHHHHHHH
Confidence 4445555555554 55666666665433 4666677776666666666 3334332 566666677777777777777
Q ss_pred HHHHhhhccCChhhHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccc----hhhhHHHHHhhhhcCCCchh-h
Q 004025 433 KSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTR----KRVLINAFTVRALRDTFSPA-R 507 (778)
Q Consensus 433 ksi~~l~pkL~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~----~~vL~~af~~~~lkD~f~~~-R 507 (778)
++|..++..++.+-|.. .+|.|-+...++ .++--|+.+++..=-.... -.+++|.+. |+|++.-... |
T Consensus 197 ~~~~~~~~~~~n~d~~~-~~~~~~~~~~~p-----~~~~~~~~~l~~~tfv~~v~~~~l~~~~p~l~-r~l~~~~~~~~r 269 (986)
T 2iw3_A 197 AAMTKATETVDNKDIER-FIPSLIQCIADP-----TEVPETVHLLGATTFVAEVTPATLSIMVPLLS-RGLNERETGIKR 269 (986)
T ss_dssp HHHHHHGGGCCCTTTGG-GHHHHHHHHHCT-----THHHHHHHHHTTCCCCSCCCHHHHHHHHHHHH-HHHTSSSHHHHH
T ss_pred HHHHHHHhcCCCcchhh-hHHHHHHHhcCh-----hhhHHHHHHhhcCeeEeeecchhHHHHHHHHH-hhhccCcchhhe
Confidence 77777766666555432 344444444444 2366666666654433322 237788888 8888765443 4
Q ss_pred hheeee--------------cc---------------CCHHHHHHHHHHHHHHHHHH
Q 004025 508 GAAKIL--------------SY---------------LNCDVRSKAFQAVDQFLQIV 535 (778)
Q Consensus 508 ~A~l~a--------------~~---------------~~~~VR~~a~~~~~~~l~~l 535 (778)
.+++-- .| .+++||+.|.++++.+...-
T Consensus 270 ~~~~~~~n~~~lv~~~~~~~~f~~~l~p~~~~~~~~~~~pe~r~~~~~a~~~l~~~~ 326 (986)
T 2iw3_A 270 KSAVIIDNMCKLVEDPQVIAPFLGKLLPGLKSNFATIADPEAREVTLRALKTLRRVG 326 (986)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHTTTHHHHHHHTTTCCSHHHHHHHHHHHHHHHHHH
T ss_pred eeEEEEcchhhhcCCHHHHhhhhhhhhhHHHHHhhccCCHHHHHHHHHHHHHHHHhh
Confidence 454433 11 89999999999998876543
|
| >1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24 | Back alignment and structure |
|---|
Probab=95.00 E-value=0.061 Score=60.20 Aligned_cols=162 Identities=13% Similarity=0.076 Sum_probs=110.0
Q ss_pred hHHHHHHhhcCChHHHHHHHHHhHHHHHhhcCh---hhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhcc---CChhh
Q 004025 373 VLPTIVKLFASNDRAIRVALLQHIDQYGQSFSA---QVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPK---LSQRT 446 (778)
Q Consensus 373 i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~---~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pk---L~~~~ 446 (778)
-+|.++++..+.|..++...+..|..+..+-+. .++....+|.|+..+.+.++.+++.++.++..|+.. .....
T Consensus 3 ~l~~lv~~L~s~~~~~q~~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~~k~~i 82 (457)
T 1xm9_A 3 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 82 (457)
T ss_dssp CHHHHHHHHHSSCTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHH
T ss_pred CHHHHHHHHCCCCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 468889999999999998888888887754332 566777899999999999999999999999988853 11222
Q ss_pred HhHHHHHHHHhhcc-CCCCcchhhHHHHHHHhhhhcccccchhh---hHHHHHhhhh--------cCCCchhhh------
Q 004025 447 ISGSLLKYLSKLQV-DEEPAIRTNTTILLGNIASHLNEGTRKRV---LINAFTVRAL--------RDTFSPARG------ 508 (778)
Q Consensus 447 l~~~LL~~laklq~-D~~~~IRtnt~icl~kIa~~L~~~~~~~v---L~~af~~~~l--------kD~f~~~R~------ 508 (778)
+....+|.|.++.. ...+.+|-+++-||+.|+.. ++.|..| .++.+. +.| +++....|.
T Consensus 83 ~~~G~i~~Lv~lL~~~~~~~~~~~a~~aL~nLa~~--~~~~~~i~~g~i~~Lv-~ll~~~~s~~~~~~~~~~~e~~~~~v 159 (457)
T 1xm9_A 83 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST--DELKEELIADALPVLA-DRVIIPFSGWCDGNSNMSREVVDPEV 159 (457)
T ss_dssp HHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTS--SSTHHHHHHHHHHHHH-HHTTHHHHTCC---------CCCHHH
T ss_pred HHcCCHHHHHHHHhhCCCHHHHHHHHHHHHHHhcC--HHhHHHHHhccHHHHH-HHHhccccccccCccchhcccccHHH
Confidence 34455778888777 67889999999999999987 5566544 467777 788 444444333
Q ss_pred --heeee--cc-CCHHHHHHHH---HHHHHHHHHHHH
Q 004025 509 --AAKIL--SY-LNCDVRSKAF---QAVDQFLQIVKQ 537 (778)
Q Consensus 509 --A~l~a--~~-~~~~VR~~a~---~~~~~~l~~l~~ 537 (778)
.|+.+ .. .+.+.|+... .++..++.-|+.
T Consensus 160 ~~~a~~aL~nLs~~~~~~~~i~~~~g~i~~Lv~lL~~ 196 (457)
T 1xm9_A 160 FFNATGCLRNLSSADAGRQTMRNYSGLIDSLMAYVQN 196 (457)
T ss_dssp HHHHHHHHHHHTTSHHHHHHHTTSTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHcCCCHHHHHHHHHh
Confidence 33333 11 3355555544 345666655554
|
| >2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} | Back alignment and structure |
|---|
Probab=94.79 E-value=0.063 Score=64.40 Aligned_cols=181 Identities=9% Similarity=-0.006 Sum_probs=119.1
Q ss_pred hhhchHHHHHHHHhhCCCCc---hhhHHHHHhccCCC-hhh-hhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChh
Q 004025 332 VLKKLLPLLASALEFGSAAA---PALTALLKMGSWLS-TEE-FSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQ 406 (778)
Q Consensus 332 ~~~kILP~Ll~~~~~~~~~~---~~L~~llki~~~l~-~ee-f~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~ 406 (778)
.....++.|++.+..+.... .++..+..++..-. .+. ....++|.++.++...+..++...+.-|..+....+..
T Consensus 315 ~~~~~i~~Lv~lL~~~~~~~~~~~a~~aL~~Ls~~~~~~~~i~~~g~l~~Ll~lL~~~~~~~~~~a~~~L~~L~~~~~~~ 394 (780)
T 2z6g_A 315 LASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQ 394 (780)
T ss_dssp HTTTHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSTTHHHHHHHTTHHHHHGGGTTCSCHHHHHHHHHHHHHHHTTCTTC
T ss_pred HHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHhhcChHHHHHHHHhchHHHHHHHHcCCchHHHHHHHHHHHHHhccchhh
Confidence 34456777777776543211 11222233332111 111 23346899999999888888877777777777766665
Q ss_pred hhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCCh---hhHhHHHHHHHHhhccC-CCC-cchhhHHHHHHHhhhhc
Q 004025 407 VVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQ---RTISGSLLKYLSKLQVD-EEP-AIRTNTTILLGNIASHL 481 (778)
Q Consensus 407 ~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~---~~l~~~LL~~laklq~D-~~~-~IRtnt~icl~kIa~~L 481 (778)
.....++|.|+..+.+.++.+|+.++.++..|+..-.+ ..+....++.|.++..+ .+. .||..++-||+.|+..-
T Consensus 395 ~~~~~~i~~Lv~lL~~~d~~vr~~A~~aL~~L~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~v~~~Al~aL~nL~~~~ 474 (780)
T 2z6g_A 395 EGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRH 474 (780)
T ss_dssp SCCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSS
T ss_pred hhhhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHHccCCHHHHHHHHHHHHHHHHhcC
Confidence 55677999999999999999999999999888764221 11223455555555543 344 89999999999998643
Q ss_pred ccc------cchhhhHHHHHhhhhcCCCc-hhhhheeee
Q 004025 482 NEG------TRKRVLINAFTVRALRDTFS-PARGAAKIL 513 (778)
Q Consensus 482 ~~~------~~~~vL~~af~~~~lkD~f~-~~R~A~l~a 513 (778)
... .+..-.++.+. +.|+++.. ..|.+++.+
T Consensus 475 ~~~~~~~~~v~~~~~l~~L~-~lL~~~~~~~v~~~A~~a 512 (780)
T 2z6g_A 475 QDAEMAQNAVRLHYGLPVVV-KLLHPPSHWPLIKATVGL 512 (780)
T ss_dssp TTHHHHHHHHHHTTCHHHHH-HTTSTTCCHHHHHHHHHH
T ss_pred chHHHHHHHHHHcCCHHHHH-HHhcCCChHHHHHHHHHH
Confidence 321 12233478888 89998875 788887776
|
| >3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A | Back alignment and structure |
|---|
Probab=94.50 E-value=0.2 Score=54.13 Aligned_cols=140 Identities=11% Similarity=0.095 Sum_probs=97.4
Q ss_pred hHHHHHHhhcCChHHHHHHHHHhHHHHHhh----cChhhhhhcchHHHHhh-cCCCcHHHHHHHHHHHHhhhccCCh---
Q 004025 373 VLPTIVKLFASNDRAIRVALLQHIDQYGQS----FSAQVVDEQVYPHVATG-FADTSAFLREMTLKSMLVLAPKLSQ--- 444 (778)
Q Consensus 373 i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~----l~~~~v~~~I~P~l~~g-f~Dt~~~iRe~tlksi~~l~pkL~~--- 444 (778)
++|.++.++.+.+..++.....-|..+... .-..++....+|.|+.. +...+..+++.++.++-.|+..-++
T Consensus 128 aIp~LV~LL~s~~~~v~~~A~~aL~nLs~~~~~~~k~~i~~~G~Ip~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~~nk~ 207 (354)
T 3nmw_A 128 CMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENKA 207 (354)
T ss_dssp HHHHHHHGGGCSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred cHHHHHHHHCCCCHHHHHHHHHHHHHHhccCCHHHHHHHHHCCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHccChhhhH
Confidence 489999999999888886555545444432 11234455678999886 4566788999888888877752222
Q ss_pred hhH-hHHHHHHHHhhccCCCC----cchhhHHHHHHHhhhhc--ccccchhhh----HHHHHhhhhcCCCchhhhheeee
Q 004025 445 RTI-SGSLLKYLSKLQVDEEP----AIRTNTTILLGNIASHL--NEGTRKRVL----INAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 445 ~~l-~~~LL~~laklq~D~~~----~IRtnt~icl~kIa~~L--~~~~~~~vL----~~af~~~~lkD~f~~~R~A~l~a 513 (778)
..+ ....+|.|.++..+... .|+.+++-+|..|+.++ +++.|+.++ ++.+. ..|+++....+..|+.+
T Consensus 208 ~i~~~~Gai~~Lv~lL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~g~i~~Lv-~lL~~~~~~v~~~A~~a 286 (354)
T 3nmw_A 208 DICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLL-QHLKSHSLTIVSNACGT 286 (354)
T ss_dssp HHHHSTTHHHHHHHHTTCCCSSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHH-HHTTCSCHHHHHHHHHH
T ss_pred HHHHhcCcHHHHHHHhccCCCcccHHHHHHHHHHHHHHHhhccCCHHHHHHHHHcCCHHHHH-HHHcCCChHHHHHHHHH
Confidence 222 35677888877765443 48999999999999864 455665553 77777 88998887777776665
|
| >3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=94.30 E-value=0.4 Score=57.31 Aligned_cols=177 Identities=12% Similarity=0.068 Sum_probs=118.7
Q ss_pred hhhhchHHHHHHHHhhCCCC--chhhHHHHHhccCCChhhhhh-----hhHHHHHHhhcCChHHHHHHHHHhHHHHHhhc
Q 004025 331 IVLKKLLPLLASALEFGSAA--APALTALLKMGSWLSTEEFSV-----KVLPTIVKLFASNDRAIRVALLQHIDQYGQSF 403 (778)
Q Consensus 331 ~~~~kILP~Ll~~~~~~~~~--~~~L~~llki~~~l~~eef~~-----~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l 403 (778)
+...-.+|.|+..+..++.. ..+.-.+..|+.. +++.. -++|.++.++.+.+..+|.....-|..+...-
T Consensus 491 VveaGaVp~LV~LL~s~s~~vqe~Aa~aL~NLA~d---~~~r~~Vv~~Gaip~Lv~LL~s~~~~~k~~Aa~AL~nL~~~~ 567 (810)
T 3now_A 491 LANEGITTALCALAKTESHNSQELIARVLNAVCGL---KELRGKVVQEGGVKALLRMALEGTEKGKRHATQALARIGITI 567 (810)
T ss_dssp HHHTTHHHHHHHHHTCCCHHHHHHHHHHHHHHHTS---HHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHS
T ss_pred HHHCcCHHHHHHHHcCCCHHHHHHHHHHHHHHcCC---HHHHHHHHHCCCHHHHHHHHccCCHHHHHHHHHHHHHHhcCC
Confidence 34455789998888755421 1233344555532 22333 35899999999888877766666666665544
Q ss_pred Chhhh-----hhcchHHHHhhcCCC-cHHHHHHHHHHHHhhhcc---CChhhHhHHHHHHHHhhccCCCCcchhhHHHHH
Q 004025 404 SAQVV-----DEQVYPHVATGFADT-SAFLREMTLKSMLVLAPK---LSQRTISGSLLKYLSKLQVDEEPAIRTNTTILL 474 (778)
Q Consensus 404 ~~~~v-----~~~I~P~l~~gf~Dt-~~~iRe~tlksi~~l~pk---L~~~~l~~~LL~~laklq~D~~~~IRtnt~icl 474 (778)
+++.+ ...++|.|+..+... +...+..++.++..|+.. .....+....++.|..|+.++.+.||.+++-||
T Consensus 568 ~p~~~~~~~~~~~aIppLv~LL~~~~~~l~~~eAl~AL~NLa~~~d~~~~~Ii~aG~l~~Lv~LL~s~~~~Vq~~A~~~L 647 (810)
T 3now_A 568 NPEVSFSGQRSLDVIRPLLNLLQQDCTALENFESLMALTNLASMNESVRQRIIKEQGVSKIEYYLMEDHLYLTRAAAQCL 647 (810)
T ss_dssp CHHHHTTTHHHHHTHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHSCCTTHHHHHHHHH
T ss_pred ChhhhhcchhhhcHHHHHHHHhCCCCcHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHH
Confidence 44331 123789999988754 445567788888888743 333455556789999999999999999999999
Q ss_pred HHhhhhcccccchhhh-----HHHHHhhhhcCCCchhhhheeee
Q 004025 475 GNIASHLNEGTRKRVL-----INAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 475 ~kIa~~L~~~~~~~vL-----~~af~~~~lkD~f~~~R~A~l~a 513 (778)
++|+.. ++.+..++ ++.+. ..+..+....|.+|..+
T Consensus 648 ~NLa~~--~~~~~~~v~~~g~l~~Lv-~LL~s~d~~vq~~Aa~A 688 (810)
T 3now_A 648 CNLVMS--EDVIKMFEGNNDRVKFLA-LLCEDEDEETATACAGA 688 (810)
T ss_dssp HHHTTS--HHHHHHHHSSSSHHHHHH-HGGGCSSHHHHHHHHHH
T ss_pred HHHhCC--hHHHHHHHhccCcHHHHH-HHhcCCCHHHHHHHHHH
Confidence 999973 33333332 45666 77777778888887766
|
| >2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.24 E-value=0.11 Score=60.44 Aligned_cols=146 Identities=12% Similarity=0.106 Sum_probs=107.1
Q ss_pred hhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChh--hhh-hcchHHHHhhcCCC-cHHHHHHHHHHHHhhhccC
Q 004025 367 EEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQ--VVD-EQVYPHVATGFADT-SAFLREMTLKSMLVLAPKL 442 (778)
Q Consensus 367 eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~--~v~-~~I~P~l~~gf~Dt-~~~iRe~tlksi~~l~pkL 442 (778)
.++..-.+|.++++..+.|..+|...+.-|-.+...-... .+. ..+++.++..+.+. ++.+|..++..+..++..-
T Consensus 9 ~~~~~g~i~~Lv~lL~~~~~~vr~~A~~~L~~La~~~~~~~~i~~~~~~i~~Lv~~L~~~~~~~~~~~A~~~L~~Ls~~~ 88 (644)
T 2z6h_A 9 AELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHR 88 (644)
T ss_dssp ---CTTTHHHHHHHHTCSCHHHHHHHHHHHHHHHTSTTHHHHHTTCHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSH
T ss_pred hhhhhchHHHHHHHHcCCCHHHHHHHHHHHHHHHCCChhHHHHHhccChHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCh
Confidence 3456678999999999999999998888888888765433 122 25789999998765 8999999998888766432
Q ss_pred Chh--hHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhccccc---chhhhHHHHHhhhhcCCCchhhhheeee
Q 004025 443 SQR--TISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGT---RKRVLINAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 443 ~~~--~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~---~~~vL~~af~~~~lkD~f~~~R~A~l~a 513 (778)
..+ ......++.|.++..++++.+|.+++-+|.+|+..-.... +..-.++.+. +.|+++.+..|.+++.+
T Consensus 89 ~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nL~~~~~~~~~~v~~~g~i~~Lv-~lL~~~~~~~~~~a~~~ 163 (644)
T 2z6h_A 89 EGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMV-ALLNKTNVKFLAITTDC 163 (644)
T ss_dssp HHHHHHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHH-HGGGCCCHHHHHHHHHH
T ss_pred hhHHHHHHcCCHHHHHHHHhCCCHHHHHHHHHHHHHHHhCcchhHHHHHHCCChHHHH-HHHCcCCHHHHHHHHHH
Confidence 111 2234578888888888889999999999999997753221 2334588888 99999988777766433
|
| >3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.07 E-value=0.25 Score=55.31 Aligned_cols=141 Identities=11% Similarity=0.089 Sum_probs=98.5
Q ss_pred hhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcC----hhhhhhcchHHHHhh-cCCCcHHHHHHHHHHHHhhhccCC---
Q 004025 372 KVLPTIVKLFASNDRAIRVALLQHIDQYGQSFS----AQVVDEQVYPHVATG-FADTSAFLREMTLKSMLVLAPKLS--- 443 (778)
Q Consensus 372 ~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~----~~~v~~~I~P~l~~g-f~Dt~~~iRe~tlksi~~l~pkL~--- 443 (778)
-.+|.++.++.+.+..++.....-|..+...-+ ..++....+|.|+.. +...+..+++.++.++-.|+..-+
T Consensus 243 GaIp~LV~LL~s~~~~v~~~A~~aL~nLs~~~~~~~k~~I~~~GaI~~LV~lLl~s~~~~v~~~A~~aL~nLs~~~~~nk 322 (458)
T 3nmz_A 243 GCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENK 322 (458)
T ss_dssp HHHHHHHHGGGCSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHCHHHH
T ss_pred CcHHHHHHHHhCCCHHHHHHHHHHHHHHhcCCCHHHHHHHHHcCCHHHHHHHHhcCCCHHHHHHHHHHHHHHccCCHHHH
Confidence 358999999999999888665555555543211 233445678999996 556688999988888877775221
Q ss_pred hhhH-hHHHHHHHHhhccCCCC----cchhhHHHHHHHhhhhc--ccccchhhh----HHHHHhhhhcCCCchhhhheee
Q 004025 444 QRTI-SGSLLKYLSKLQVDEEP----AIRTNTTILLGNIASHL--NEGTRKRVL----INAFTVRALRDTFSPARGAAKI 512 (778)
Q Consensus 444 ~~~l-~~~LL~~laklq~D~~~----~IRtnt~icl~kIa~~L--~~~~~~~vL----~~af~~~~lkD~f~~~R~A~l~ 512 (778)
...+ ....+|.|.++...... .|+.+++-+|..|+.++ +++.|+.++ ++.+. ..|+++....+..|+.
T Consensus 323 ~~I~~~~Gal~~Lv~LL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~G~i~~Lv-~LL~~~~~~v~~~A~~ 401 (458)
T 3nmz_A 323 ADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLL-QHLKSHSLTIVSNACG 401 (458)
T ss_dssp HHHHHSTTHHHHHHHHTTCCCSSSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHH-HHSSCSCHHHHHHHHH
T ss_pred HHHHHhcCcHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHhcccCCHHHHHHHHHcccHHHHH-HHHcCCChHHHHHHHH
Confidence 1222 34678888887765443 49999999999999863 455565553 67777 8899888777777666
Q ss_pred e
Q 004025 513 L 513 (778)
Q Consensus 513 a 513 (778)
+
T Consensus 402 a 402 (458)
T 3nmz_A 402 T 402 (458)
T ss_dssp H
T ss_pred H
Confidence 6
|
| >1lrv_A LRV, leucine-rich repeat variant; leucine-rich repeats, repetitive structure, iron sulfur proteins, nitrogen fixation; 2.60A {Azotobacter vinelandii} SCOP: a.118.1.5 | Back alignment and structure |
|---|
Probab=93.65 E-value=0.025 Score=57.97 Aligned_cols=109 Identities=16% Similarity=0.205 Sum_probs=78.2
Q ss_pred HHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHHHHH
Q 004025 375 PTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKY 454 (778)
Q Consensus 375 P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~LL~~ 454 (778)
+.+..+..++|..||..+..+| +. +.+...++|.++.||...+..+ .. ..
T Consensus 101 ~~L~~ll~D~d~~VR~~aA~~l-------~~--------~~L~~L~~D~d~~VR~~aA~~l-------~~--------~~ 150 (244)
T 1lrv_A 101 EQLSALMFDEDREVRITVADRL-------PL--------EQLEQMAADRDYLVRAYVVQRI-------PP--------GR 150 (244)
T ss_dssp GGGGGTTTCSCHHHHHHHHHHS-------CT--------GGGGGGTTCSSHHHHHHHHHHS-------CG--------GG
T ss_pred HHHHHHHcCCCHHHHHHHHHhC-------CH--------HHHHHHHcCCCHHHHHHHHHhc-------CH--------HH
Confidence 3567778889999998888754 22 2244557899999999888753 11 13
Q ss_pred HHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhhheeee-------cc---CCHHHHHHH
Q 004025 455 LSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL-------SY---LNCDVRSKA 524 (778)
Q Consensus 455 laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~l~a-------~~---~~~~VR~~a 524 (778)
+..+..|+++.||...+-. +. .+.+. ++++|+.+.+|.+++.. .+ ++..||..+
T Consensus 151 l~~l~~D~d~~VR~~aa~~-------l~--------~~ll~-~ll~D~d~~VR~aaa~~l~~~~L~~Ll~D~d~~VR~~a 214 (244)
T 1lrv_A 151 LFRFMRDEDRQVRKLVAKR-------LP--------EESLG-LMTQDPEPEVRRIVASRLRGDDLLELLHDPDWTVRLAA 214 (244)
T ss_dssp GGGTTTCSCHHHHHHHHHH-------SC--------GGGGG-GSTTCSSHHHHHHHHHHCCGGGGGGGGGCSSHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHHHc-------CC--------HHHHH-HHHcCCCHHHHHHHHHhCCHHHHHHHHcCCCHHHHHHH
Confidence 5567789999999888664 21 23455 78889999999888866 11 888899888
Q ss_pred HHHHH
Q 004025 525 FQAVD 529 (778)
Q Consensus 525 ~~~~~ 529 (778)
-+.+.
T Consensus 215 a~~l~ 219 (244)
T 1lrv_A 215 VEHAS 219 (244)
T ss_dssp HHHSC
T ss_pred HHcCC
Confidence 88876
|
| >3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=93.64 E-value=0.43 Score=57.06 Aligned_cols=178 Identities=15% Similarity=0.170 Sum_probs=127.3
Q ss_pred HHHhccCCC----hhhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhh---cChhhh-hhcchHHHHhhcCCCcHHHH
Q 004025 357 LLKMGSWLS----TEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQS---FSAQVV-DEQVYPHVATGFADTSAFLR 428 (778)
Q Consensus 357 llki~~~l~----~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~---l~~~~v-~~~I~P~l~~gf~Dt~~~iR 428 (778)
+-++-+.+. .|.|.+.+--.|...|..++-.-++....-+..+..- .....+ .+..+|.|+..+...+..++
T Consensus 228 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~alt~i~~g~~~~~~~~~~~~G~v~~li~Ll~s~~~~~q 307 (810)
T 3now_A 228 LARIYENMYYDEAKARFTDQIDEYIKDKLLAPDMESKVRVTVAITALLNGPLDVGNQVVAREGILQMILAMATTDDELQQ 307 (810)
T ss_dssp HHHHHHTCCSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHSSSHHHHHHHHHTTTHHHHHHHHHHSSCHHHH
T ss_pred HHHHHHHhccchhHHHHHHHHHHHHHHHhccCChHhHHHHHHHHHHHhcCCHHHHHHHHhccchHHHHHHHhCCCCHHHH
Confidence 345655665 3779999999999999887765544444444433322 233334 66789999999999999999
Q ss_pred HHHHHHHHhhhccCChhh--HhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhccc--------ccchhhhHHHHHhhh
Q 004025 429 EMTLKSMLVLAPKLSQRT--ISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNE--------GTRKRVLINAFTVRA 498 (778)
Q Consensus 429 e~tlksi~~l~pkL~~~~--l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~--------~~~~~vL~~af~~~~ 498 (778)
++++.++..++..-..+. +...+ +.|..+.......||.+++.+|.|++..-+. +..-.-|++.|. +.
T Consensus 308 ~~A~~al~~aa~~~~~R~~I~~~gv-~~L~~Ll~s~~~~vr~~Al~~L~kl~s~~~~d~~~~~~~~g~i~~Lv~~l~-~l 385 (810)
T 3now_A 308 RVACECLIAASSKKDKAKALCEQGV-DILKRLYHSKNDGIRVRALVGLCKLGSYGGQDAAIRPFGDGAALKLAEACR-RF 385 (810)
T ss_dssp HHHHHHHHHHTTSHHHHHTTHHHHH-HHHHHHTTCSCHHHHHHHHHHHHHHHTTTTTTTSCCSSTTTHHHHHHHHHH-HH
T ss_pred HHHHHHHHHHcCCcHHHHHHHHcCc-HHHHHHHcCCCHHHHHHHHHHHHHhccccccCccccchhhccHHHHHHHHH-HH
Confidence 999999999887744333 23444 8888888777789999999999999854321 111245789999 99
Q ss_pred hcCC--Cchhhhheeee-cc--CCHHHHHHHH---HHHHHHHHHHH
Q 004025 499 LRDT--FSPARGAAKIL-SY--LNCDVRSKAF---QAVDQFLQIVK 536 (778)
Q Consensus 499 lkD~--f~~~R~A~l~a-~~--~~~~VR~~a~---~~~~~~l~~l~ 536 (778)
|..+ ....|..|+.+ .| .+..||.+-- .++..+++-|+
T Consensus 386 L~~~~~d~~v~~~AveaLayLS~~~~vk~~lv~d~g~Ip~LV~LL~ 431 (810)
T 3now_A 386 LIKPGKDKDIRRWAADGLAYLTLDAECKEKLIEDKASIHALMDLAR 431 (810)
T ss_dssp HHCSSCCSSHHHHHHHHHHHHTTSHHHHHHHHHCHHHHHHHHHHHH
T ss_pred hcCCCCCHHHHHHHHHHHHHHhCCcHHHHHHHHccchHHHHHHHhC
Confidence 9988 78899999999 55 6677776654 35666666555
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=93.45 E-value=0.23 Score=51.82 Aligned_cols=29 Identities=3% Similarity=-0.042 Sum_probs=24.9
Q ss_pred CccccccCCCCeEEcCCCcEEEEecccccc
Q 004025 149 KLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (778)
Q Consensus 149 ~ivH~dLkp~NI~v~~~g~~KL~dFgla~~ 178 (778)
.++|||+.+.||+ ..+|.+.|+||+.+..
T Consensus 174 ~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 174 AACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp EEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred eeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 5899999999999 5667789999998764
|
| >1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A | Back alignment and structure |
|---|
Probab=93.02 E-value=0.13 Score=63.14 Aligned_cols=120 Identities=11% Similarity=0.067 Sum_probs=89.4
Q ss_pred HHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcC------CCcHHHHHHHHHHHHhhhccCC-----hh------hHh-
Q 004025 387 AIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFA------DTSAFLREMTLKSMLVLAPKLS-----QR------TIS- 448 (778)
Q Consensus 387 ~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~------Dt~~~iRe~tlksi~~l~pkL~-----~~------~l~- 448 (778)
.+|.+..+-|..+..+++ +.+-..+++.+...+. +.+-..||+++.++-.++.++. .. .+.
T Consensus 376 s~R~aa~~~L~~l~~~~~-~~v~~~~l~~i~~~l~~~~~~~~~~w~~reaal~algaia~~~~~~~~~~~~~~~~~~l~~ 454 (960)
T 1wa5_C 376 TRRRACTDFLKELKEKNE-VLVTNIFLAHMKGFVDQYMSDPSKNWKFKDLYIYLFTALAINGNITNAGVSSTNNLLNVVD 454 (960)
T ss_dssp CHHHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHHHC----CHHHHHHHHHHHHHHHBSSCCBTTBCCCBCTTCCHHH
T ss_pred CcHHHHHHHHHHHHHHcc-hhHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHhccccCCcccccccccHHH
Confidence 678899999999999998 5555668888777776 5677899999999998886531 11 222
Q ss_pred ---HHHHHHHHhhccCC---CCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhhheeee
Q 004025 449 ---GSLLKYLSKLQVDE---EPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 449 ---~~LL~~laklq~D~---~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~l~a 513 (778)
+.++|.| .|+ .|-||.-++.|||++++.+.++.-. -+++++. +.|.|+..++|.+|..|
T Consensus 455 ~l~~~v~p~l----~~~~~~~p~vr~~a~~~lg~~~~~~~~~~l~-~~l~~l~-~~L~d~~~~V~~~A~~A 519 (960)
T 1wa5_C 455 FFTKEIAPDL----TSNNIPHIILRVDAIKYIYTFRNQLTKAQLI-ELMPILA-TFLQTDEYVVYTYAAIT 519 (960)
T ss_dssp HHHHHTHHHH----HCSSCSCHHHHHHHHHHHHHTGGGSCHHHHH-HHHHHHH-HHTTCSCHHHHHHHHHH
T ss_pred HHHHHhHHHh----cCCCCCCceehHHHHHHHHHHHhhCCHHHHH-HHHHHHH-HHhCCCChhHHHHHHHH
Confidence 2334433 455 7899999999999999999655433 4466677 78999999999998888
|
| >3oc3_A Helicase MOT1, MOT1; regulation of transcription, hydrolase-transc complex; HET: MES; 3.10A {Encephalitozoon cuniculi} | Back alignment and structure |
|---|
Probab=93.02 E-value=0.98 Score=51.01 Aligned_cols=171 Identities=9% Similarity=0.057 Sum_probs=114.4
Q ss_pred cCCChhhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhcc
Q 004025 362 SWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPK 441 (778)
Q Consensus 362 ~~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pk 441 (778)
..++.+ -.++-.+++....+.+++|-.-|--|.-+.+.+.. -+.|+|.++.|+.|.+..||..+..++..++
T Consensus 256 ~hLp~e---~~IL~qLV~~l~~~~WEVRHGGLLGLKYL~DLL~~---Ld~Vv~aVL~GL~D~DDDVRAVAAetLiPIA-- 327 (800)
T 3oc3_A 256 YPLIGP---NDIIEQLVGFLDSGDWQVQFSGLIALGYLKEFVED---KDGLCRKLVSLLSSPDEDIKLLSAELLCHFP-- 327 (800)
T ss_dssp TTTSCS---CCHHHHHTTGGGCSCHHHHHHHHHHHHHTGGGCCC---HHHHHHHHHHHTTCSSHHHHHHHHHHHTTSC--
T ss_pred HhCChh---HHHHHHHHhhcCCCCeeehhhhHHHHHHHHHHHHH---HHHHHHHHHhhcCCcccHHHHHHHHHhhhhc--
Confidence 667766 34555555555778899994333333333444443 4678999999999999999999999999888
Q ss_pred CChhhHhHHHHHHHHhhccC-CCCcchhhHHH-HHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhhheeee--cc--
Q 004025 442 LSQRTISGSLLKYLSKLQVD-EEPAIRTNTTI-LLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL--SY-- 515 (778)
Q Consensus 442 L~~~~l~~~LL~~laklq~D-~~~~IRtnt~i-cl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~l~a--~~-- 515 (778)
.... .+.|+..+-....| ++-+.=|+.++ .|++|..+=........|+|... ..||-+-.-+|.|.|.. .+
T Consensus 328 -~p~~-l~~LL~iLWd~L~~LDDLSASTgSVMdLLAkL~s~p~~a~~dp~LVPRL~-PFLRHtITSVR~AVL~TL~tfL~ 404 (800)
T 3oc3_A 328 -ITDS-LDLVLEKCWKNIESEELISVSKTSNLSLLTKIYRENPELSIPPERLKDIF-PCFTSPVPEVRTSILNMVKNLSE 404 (800)
T ss_dssp -CSST-HHHHHHHHHHHHHTCCSCCTTHHHHHHHHHHHHHHCTTCCCCSGGGGGTG-GGGTCSSHHHHHHHHHHTTTCCC
T ss_pred -chhh-HHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHcCCcccccChHHHHHHH-hhhcCCcHHHHHHHHHHHHHHHh
Confidence 2122 34555555444433 22343343333 55565555444344558899998 89999999999999988 22
Q ss_pred --------------CCHHHHHHHHHHHH---HHHHHHHHHHhhcC
Q 004025 516 --------------LNCDVRSKAFQAVD---QFLQIVKQYHEKTN 543 (778)
Q Consensus 516 --------------~~~~VR~~a~~~~~---~~l~~l~~~~~~~~ 543 (778)
.+.+||+.+.++.+ .+++-+=.+..++-
T Consensus 405 ~~~LRLIFQNILLE~neeIl~lS~~VWk~r~~Ll~~wi~L~MtPI 449 (800)
T 3oc3_A 405 ESIDFLVAEVVLIEEKDEIREMAIKLLKKRRDLPKNLILHFMNVI 449 (800)
T ss_dssp HHHHHHHHHHHHHCSCHHHHHHHHHHHHTCSCCCHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCcC
Confidence 89999999999996 55555555555543
|
| >2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A | Back alignment and structure |
|---|
Probab=92.98 E-value=0.41 Score=58.29 Aligned_cols=141 Identities=13% Similarity=0.215 Sum_probs=113.8
Q ss_pred hhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCc-HHHHHHHHHHHHhhhccCChhhH
Q 004025 369 FSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTS-AFLREMTLKSMLVLAPKLSQRTI 447 (778)
Q Consensus 369 f~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~-~~iRe~tlksi~~l~pkL~~~~l 447 (778)
|--.++|.++..+++.+..||-+.-.-+..++..+++..+ ..++|.++.++..+. =+.+..+|+.|-.++.... .++
T Consensus 92 ~~~~~~~~~~~~~~dk~~~v~~aa~~~~~~~~~~~~~~a~-~~~~~~~~~~~~~~~kw~~k~~~l~~~~~~~~~~~-~~~ 169 (986)
T 2iw3_A 92 YIVQLVPAICTNAGNKDKEIQSVASETLISIVNAVNPVAI-KALLPHLTNAIVETNKWQEKIAILAAFSAMVDAAK-DQV 169 (986)
T ss_dssp HHHTTHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSCGGGH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHSH-HHH
T ss_pred chHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhCCHHHH-HHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhH-HHH
Confidence 3335789999999999999999999999999999999988 779999999998774 6888888888888886653 332
Q ss_pred ---hHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCC-chhhhheeee
Q 004025 448 ---SGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTF-SPARGAAKIL 513 (778)
Q Consensus 448 ---~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f-~~~R~A~l~a 513 (778)
-.+|+|.+...-.|..+.|.....-|+.+++..++..-..+ .+|++. +.+.+|- +|-=+-.|.+
T Consensus 170 ~~~~~~~~p~~~~~~~d~k~~v~~~~~~~~~~~~~~~~n~d~~~-~~~~~~-~~~~~p~~~~~~~~~l~~ 237 (986)
T 2iw3_A 170 ALRMPELIPVLSETMWDTKKEVKAAATAAMTKATETVDNKDIER-FIPSLI-QCIADPTEVPETVHLLGA 237 (986)
T ss_dssp HHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHGGGCCCTTTGG-GHHHHH-HHHHCTTHHHHHHHHHTT
T ss_pred HHhccchhcchHhhcccCcHHHHHHHHHHHHHHHhcCCCcchhh-hHHHHH-HHhcChhhhHHHHHHhhc
Confidence 46899999999999999999999999999999998655444 477887 8888774 3333444444
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=92.84 E-value=0.35 Score=51.21 Aligned_cols=68 Identities=9% Similarity=-0.004 Sum_probs=47.3
Q ss_pred cCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC---CCCeeeEeeeeEecccccCCccc
Q 004025 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR---HPNILAFLHSTEVENIDATSTKI 100 (778)
Q Consensus 25 ~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr---HPnIlk~~d~~e~e~~~g~~~~~ 100 (778)
+.++.|. . .+|.... ++..+.+|+.... ....+..|+..|+.|. ...+.+++...+.+ .
T Consensus 42 ~~l~gG~~n--~~y~v~~--~~~~~vlK~~~~~-----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~--------g 104 (312)
T 3jr1_A 42 EKLYSGEMN--EIWLIND--EVQTVFVKINERS-----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQ--------G 104 (312)
T ss_dssp EEECCSSSS--EEEEEES--SSCEEEEEEEEGG-----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECS--------S
T ss_pred EEeCCccce--eeeEEEE--CCCeEEEEeCCcc-----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecC--------C
Confidence 4566665 5 7888764 5778889987642 2456788888888874 24566777766542 2
Q ss_pred EEEEEecCC
Q 004025 101 TIYIVTEPV 109 (778)
Q Consensus 101 ~lyIVtE~v 109 (778)
..|+|||++
T Consensus 105 ~~~lvme~l 113 (312)
T 3jr1_A 105 HSFLLLEAL 113 (312)
T ss_dssp EEEEEEECC
T ss_pred ceEEEEEec
Confidence 689999999
|
| >3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus} | Back alignment and structure |
|---|
Probab=91.89 E-value=2.9 Score=42.15 Aligned_cols=155 Identities=14% Similarity=0.126 Sum_probs=119.7
Q ss_pred hHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChh---hhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCC--hhhH
Q 004025 373 VLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQ---VVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLS--QRTI 447 (778)
Q Consensus 373 i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~---~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~--~~~l 447 (778)
.+-.+..+....|+.++...|.-+..+++.++.. ..-+++||-++....+.+.-|--.++|+|-.++.... +.+.
T Consensus 34 ~l~~L~~LL~dkD~~vk~raL~~LeellK~~~~~l~~~~~e~~Ld~iI~llk~~dEkval~A~r~L~~LLe~vpL~~~~y 113 (265)
T 3b2a_A 34 ALFLILELAGEDDETTRLRAFVALGEILKRADSDLRMMVLERHLDVFINALSQENEKVTIKALRALGYLVKDVPMGSKTF 113 (265)
T ss_dssp HHHHHHHHTTSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHHHHHTTCCBCHHHH
T ss_pred HHHHHHHHHhccchHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHcCCCCCHHHH
Confidence 5677888889999999999999999999886443 3456699999999999999988888888888877653 3332
Q ss_pred hHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhhheeee-----cc-------
Q 004025 448 SGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL-----SY------- 515 (778)
Q Consensus 448 ~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~l~a-----~~------- 515 (778)
..+...|..+-+...+-+|-=++-.+|++ +.. +-.+-+++... +.++-.......|||.+ .|
T Consensus 114 -~Kl~~aL~dlik~~~~il~~eaae~Lgkl-kv~---~~~~~V~~~l~-sLl~Skd~~vK~agl~~L~eia~~S~D~~i~ 187 (265)
T 3b2a_A 114 -LKAAKTLVSLLESPDDMMRIETIDVLSKL-QPL---EDSKLVRTYIN-ELVVSPDLYTKVAGFCLFLNMLNSSADSGHL 187 (265)
T ss_dssp -HHHHHHHHHHTTSCCHHHHHHHHHHHHHC-CBS---CCCHHHHHHHH-HHHTCSSHHHHHHHHHHHHHHGGGCSSCCCG
T ss_pred -HHHHHHHHHHhcCCCchHHHHHHHHhCcC-Ccc---cchHHHHHHHH-HHHhCCChhHHHHHHHHHHHhhcccCCHHHH
Confidence 34555556666677788899999999998 222 33445677777 88888899999999998 21
Q ss_pred -------------CCHHHHHHHHHHHHHHHH
Q 004025 516 -------------LNCDVRSKAFQAVDQFLQ 533 (778)
Q Consensus 516 -------------~~~~VR~~a~~~~~~~l~ 533 (778)
.++.||+.|...++..+.
T Consensus 188 ~~I~~eI~elL~~eD~~l~e~aLd~Le~ils 218 (265)
T 3b2a_A 188 TLILDEIPSLLQNDNEFIVELALDVLEKALS 218 (265)
T ss_dssp GGTTTTHHHHHTCSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHc
Confidence 789999999888776654
|
| >3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A | Back alignment and structure |
|---|
Probab=91.76 E-value=0.48 Score=51.11 Aligned_cols=162 Identities=10% Similarity=0.093 Sum_probs=104.6
Q ss_pred hhhhchHHHHHHHHhh-CCC--CchhhHHHHHhccCCC--hhhh--hhhhHHHHHHhhcCChH----HHH---HHHHHhH
Q 004025 331 IVLKKLLPLLASALEF-GSA--AAPALTALLKMGSWLS--TEEF--SVKVLPTIVKLFASNDR----AIR---VALLQHI 396 (778)
Q Consensus 331 ~~~~kILP~Ll~~~~~-~~~--~~~~L~~llki~~~l~--~eef--~~~i~P~i~~lF~~~Dr----~iR---~~LL~~l 396 (778)
+...-.+|.|++.+.. +.. ...++..+..++...+ ...+ ..-.+|.|++++...+. .++ ...|.||
T Consensus 166 i~~~G~Ip~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~~nk~~i~~~~Gai~~Lv~lL~~~~~~~~~~v~~~A~~aL~nL 245 (354)
T 3nmw_A 166 LREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNV 245 (354)
T ss_dssp HHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHSTTHHHHHHHHTTCCCSSSCCHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHccChhhhHHHHHhcCcHHHHHHHhccCCCcccHHHHHHHHHHHHHH
Confidence 4445578999887543 221 1122333444544222 2233 34578999999876543 344 4567777
Q ss_pred HHHH---hhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCC---hhhHhHHHHHHHHhhccCCCCcchhhH
Q 004025 397 DQYG---QSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLS---QRTISGSLLKYLSKLQVDEEPAIRTNT 470 (778)
Q Consensus 397 ~~~~---~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~---~~~l~~~LL~~laklq~D~~~~IRtnt 470 (778)
..++ +.--...++...+|.++..+.+.+..+++.++.+|..++-.=. ...+....+|.|..|.......||.++
T Consensus 246 s~~~a~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~~~~~~i~~~G~i~~Lv~LL~s~~~~i~~~A 325 (354)
T 3nmw_A 246 SSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIHSKHKMIAMGS 325 (354)
T ss_dssp HHHHTTCHHHHHHHHTTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHHTTHHHHHHTTTTCSSHHHHHHH
T ss_pred HhhccCCHHHHHHHHHcCCHHHHHHHHcCCChHHHHHHHHHHHHHhCCCHHHHHHHHHCCCHHHHHHHHhCCCHHHHHHH
Confidence 6542 2222334555689999999999999999999999998884211 122345668999999888889999999
Q ss_pred HHHHHHhhhhcccccchhhhHH
Q 004025 471 TILLGNIASHLNEGTRKRVLIN 492 (778)
Q Consensus 471 ~icl~kIa~~L~~~~~~~vL~~ 492 (778)
+-.|..|+..-....+...+++
T Consensus 326 ~~aL~nL~~~~~~~~~~~~~~~ 347 (354)
T 3nmw_A 326 AAALRNLMANRPAKYKDANIMS 347 (354)
T ss_dssp HHHHHHHHTTCCGGGC------
T ss_pred HHHHHHHHcCCHHHHhhhcccC
Confidence 9999999999777676665554
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=91.62 E-value=2.5 Score=44.11 Aligned_cols=29 Identities=10% Similarity=0.116 Sum_probs=25.1
Q ss_pred CCccccccCCCCeEEcCCCcEEEEecccccc
Q 004025 148 CKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (778)
Q Consensus 148 ~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~ 178 (778)
..++|||+++.||+++ + .+.|+||+.+..
T Consensus 195 ~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 195 VLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred eeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 4689999999999998 4 899999998654
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=91.08 E-value=0.37 Score=49.93 Aligned_cols=70 Identities=11% Similarity=0.080 Sum_probs=42.7
Q ss_pred ccCCCCCCCceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCC---CeeeEeeeeEecccccCCccc
Q 004025 24 GDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHP---NILAFLHSTEVENIDATSTKI 100 (778)
Q Consensus 24 ~~~lg~g~g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHP---nIlk~~d~~e~e~~~g~~~~~ 100 (778)
.+.+|.|. .+.||+.+. .||+.|.+|+....... ....+..|++.|+.|.-- -+.+++...
T Consensus 20 v~~~g~G~-~~~vyrv~l-~DG~~~~vK~~~~~~~~--~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~------------ 83 (288)
T 3f7w_A 20 VAERGHSH-RWHLYRVEL-ADGTPLFVKALPDDAPA--LDGLFRAEALGLDWLGRSFGSPVPQVAGWD------------ 83 (288)
T ss_dssp EEEEEEET-TEEEEEEEE-TTSCEEEEEECCTTCCC--CTTHHHHHHHHHHHHTCSTTCCSCCEEEEE------------
T ss_pred EEecCCCC-CeEEEEEEE-CCCCEEEEEEeCCCCcc--hhhHHHHHHHHHHHHHhhCCCCcceEEecc------------
Confidence 34555553 348999885 47899999986543221 123467888888877421 133444321
Q ss_pred EEEEEecCC
Q 004025 101 TIYIVTEPV 109 (778)
Q Consensus 101 ~lyIVtE~v 109 (778)
.-++|||++
T Consensus 84 ~~~lv~e~l 92 (288)
T 3f7w_A 84 DRTLAMEWV 92 (288)
T ss_dssp TTEEEEECC
T ss_pred CceEEEEee
Confidence 127889998
|
| >1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24 | Back alignment and structure |
|---|
Probab=90.09 E-value=2.1 Score=47.44 Aligned_cols=161 Identities=12% Similarity=0.097 Sum_probs=105.7
Q ss_pred hHHHHHHHHhhCCCCc--hhhHHHHHhccCCC--h-hhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhh---cChhh
Q 004025 336 LLPLLASALEFGSAAA--PALTALLKMGSWLS--T-EEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQS---FSAQV 407 (778)
Q Consensus 336 ILP~Ll~~~~~~~~~~--~~L~~llki~~~l~--~-eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~---l~~~~ 407 (778)
-+|.|++.+..++... .+...+-.++..-+ . .-...-.+|.+++++.+.+..++.....-|..+... ....+
T Consensus 3 ~l~~lv~~L~s~~~~~q~~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~~k~~i 82 (457)
T 1xm9_A 3 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 82 (457)
T ss_dssp CHHHHHHHHHSSCTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHH
T ss_pred CHHHHHHHHCCCCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 3677777777654211 12223334443222 1 234456789999999999998887777666666643 23335
Q ss_pred hhhcchHHHHhhcC-CCcHHHHHHHHHHHHhhhcc--CChhhHhHHHHHHHHhhc--------cCC--------CCcchh
Q 004025 408 VDEQVYPHVATGFA-DTSAFLREMTLKSMLVLAPK--LSQRTISGSLLKYLSKLQ--------VDE--------EPAIRT 468 (778)
Q Consensus 408 v~~~I~P~l~~gf~-Dt~~~iRe~tlksi~~l~pk--L~~~~l~~~LL~~laklq--------~D~--------~~~IRt 468 (778)
++.-.+|.|+..+. +.++.+++.++.++-.|+-. .....+. ..+|.|.++. .++ ++.|+.
T Consensus 83 ~~~G~i~~Lv~lL~~~~~~~~~~~a~~aL~nLa~~~~~~~~i~~-g~i~~Lv~ll~~~~s~~~~~~~~~~~e~~~~~v~~ 161 (457)
T 1xm9_A 83 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFF 161 (457)
T ss_dssp HHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSSSTHHHHHH-HHHHHHHHHTTHHHHTCC---------CCCHHHHH
T ss_pred HHcCCHHHHHHHHhhCCCHHHHHHHHHHHHHHhcCHHhHHHHHh-ccHHHHHHHHhccccccccCccchhcccccHHHHH
Confidence 56678999999999 77899999999999888754 2223455 7788887776 222 345666
Q ss_pred hHHHHHHHhhhhcccccchhhh-----HHHHHhhhhc
Q 004025 469 NTTILLGNIASHLNEGTRKRVL-----INAFTVRALR 500 (778)
Q Consensus 469 nt~icl~kIa~~L~~~~~~~vL-----~~af~~~~lk 500 (778)
|++-+|..|+.. ++.|+.+. ++++. ..|+
T Consensus 162 ~a~~aL~nLs~~--~~~~~~i~~~~g~i~~Lv-~lL~ 195 (457)
T 1xm9_A 162 NATGCLRNLSSA--DAGRQTMRNYSGLIDSLM-AYVQ 195 (457)
T ss_dssp HHHHHHHHHTTS--HHHHHHHTTSTTHHHHHH-HHHH
T ss_pred HHHHHHHHHccC--HHHHHHHHHcCCCHHHHH-HHHH
Confidence 999999999986 55555443 55555 5665
|
| >3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus} | Back alignment and structure |
|---|
Probab=89.83 E-value=1.1 Score=48.16 Aligned_cols=128 Identities=13% Similarity=0.127 Sum_probs=95.1
Q ss_pred hhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHH
Q 004025 372 KVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSL 451 (778)
Q Consensus 372 ~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~L 451 (778)
.+...|.+=...++.-||-..|.-|..+. + ..+-+.|.+.+-+++.|.+|.||..++-++..+.++-.+ .+ ..+
T Consensus 104 Lv~Nsl~kDl~~~N~~iR~lALRtL~~I~---~-~~m~~~l~~~lk~~L~d~~pyVRk~A~l~~~kL~~~~pe-~v-~~~ 177 (355)
T 3tjz_B 104 IVTSSLTKDMTGKEDSYRGPAVRALCQIT---D-STMLQAIERYMKQAIVDKVPSVSSSALVSSLHLLKCSFD-VV-KRW 177 (355)
T ss_dssp GGHHHHHHHHHSSCHHHHHHHHHHHHHHC---C-TTTHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHTTTCHH-HH-HTT
T ss_pred HHHHHHHhhcCCCcHhHHHHHHHHHhcCC---C-HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhccCHH-HH-HHH
Confidence 67788888888888899988887766653 2 334567999999999999999999999999999977544 33 457
Q ss_pred HHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhh-hhcCCCchhhh
Q 004025 452 LKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVR-ALRDTFSPARG 508 (778)
Q Consensus 452 L~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~-~lkD~f~~~R~ 508 (778)
+..+..+..|..+.|-.|++-+|..|..+ +...- .-|++.|. + .+++|+..+.+
T Consensus 178 ~~~l~~ll~d~n~~V~~~Al~lL~ei~~~-d~~a~-~kLv~~l~-~~~l~~~~~q~~l 232 (355)
T 3tjz_B 178 VNEAQEAASSDNIMVQYHALGLLYHVRKN-DRLAV-SKMISKFT-RHGLKSPFAYCMM 232 (355)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHHHTT-CHHHH-HHHHHHHH-SSCCSCHHHHHHH
T ss_pred HHHHHHHhcCCCccHHHHHHHHHHHHHhh-chHHH-HHHHHHHh-cCCCcChHHHHHH
Confidence 77778888899999999999999998764 21111 22466666 5 35666655543
|
| >1lrv_A LRV, leucine-rich repeat variant; leucine-rich repeats, repetitive structure, iron sulfur proteins, nitrogen fixation; 2.60A {Azotobacter vinelandii} SCOP: a.118.1.5 | Back alignment and structure |
|---|
Probab=87.92 E-value=0.24 Score=50.68 Aligned_cols=106 Identities=19% Similarity=0.184 Sum_probs=70.1
Q ss_pred HHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHHHHHH
Q 004025 376 TIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYL 455 (778)
Q Consensus 376 ~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~LL~~l 455 (778)
.+..|..++|..||..+..+ ++. +.+....+|.++.||...+..+ .. +.|
T Consensus 126 ~L~~L~~D~d~~VR~~aA~~-------l~~--------~~l~~l~~D~d~~VR~~aa~~l-------~~--------~ll 175 (244)
T 1lrv_A 126 QLEQMAADRDYLVRAYVVQR-------IPP--------GRLFRFMRDEDRQVRKLVAKRL-------PE--------ESL 175 (244)
T ss_dssp GGGGGTTCSSHHHHHHHHHH-------SCG--------GGGGGTTTCSCHHHHHHHHHHS-------CG--------GGG
T ss_pred HHHHHHcCCCHHHHHHHHHh-------cCH--------HHHHHHHcCCCHHHHHHHHHcC-------CH--------HHH
Confidence 35566778888888877764 222 2344567788888888877762 11 234
Q ss_pred HhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhhheeee-------cc--CCHHHHHHHHH
Q 004025 456 SKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL-------SY--LNCDVRSKAFQ 526 (778)
Q Consensus 456 aklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~l~a-------~~--~~~~VR~~a~~ 526 (778)
..+..|+++.||.+.+-- |. .+++. ..++|+.|.+|.++..+ .+ ++..||..|.+
T Consensus 176 ~~ll~D~d~~VR~aaa~~-------l~--------~~~L~-~Ll~D~d~~VR~~aa~~l~~~~L~~L~D~~~~VR~aa~~ 239 (244)
T 1lrv_A 176 GLMTQDPEPEVRRIVASR-------LR--------GDDLL-ELLHDPDWTVRLAAVEHASLEALRELDEPDPEVRLAIAG 239 (244)
T ss_dssp GGSTTCSSHHHHHHHHHH-------CC--------GGGGG-GGGGCSSHHHHHHHHHHSCHHHHHHCCCCCHHHHHHHHC
T ss_pred HHHHcCCCHHHHHHHHHh-------CC--------HHHHH-HHHcCCCHHHHHHHHHcCCHHHHHHccCCCHHHHHHHHH
Confidence 466778888888877743 21 24455 77788888888888777 11 67778877764
Q ss_pred H
Q 004025 527 A 527 (778)
Q Consensus 527 ~ 527 (778)
.
T Consensus 240 ~ 240 (244)
T 1lrv_A 240 R 240 (244)
T ss_dssp C
T ss_pred H
Confidence 3
|
| >3l9t_A Putative uncharacterized protein SMU.31; hypothetical protein, unknown function; HET: EPE; 2.21A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=87.17 E-value=1.9 Score=43.47 Aligned_cols=107 Identities=10% Similarity=0.202 Sum_probs=85.1
Q ss_pred hhhHHHHHHhhc-CChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhH
Q 004025 371 VKVLPTIVKLFA-SNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISG 449 (778)
Q Consensus 371 ~~i~P~i~~lF~-~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~ 449 (778)
..+++.|...|. ..-..||..+-.-+..++....++ ..++.+..-..|.++-||-.++..+...+.....+.--.
T Consensus 102 ~~~L~~ir~~va~D~~WrVre~lA~a~~~~~~~~~pe----~~l~~~~~W~~d~n~~VRR~Ase~~rpW~~~~~~k~dp~ 177 (240)
T 3l9t_A 102 KEILIFMRDEVSKDNNWRVQEVLAKAFDEFCKKIEYK----KALPIIDEWLKSSNLHTRRAATEGLRIWTNRPYFKENPN 177 (240)
T ss_dssp HHHHHHHHHTGGGCSCHHHHHHHHHHHHHHHHHHCTT----TTHHHHHHHHHCSSHHHHHHHHHHTCSGGGSTTTTTCHH
T ss_pred HHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHhcCHH----HHHHHHHHHhcCCCHHHHHHHHHhhHHHhccchhhcCHH
Confidence 568899988554 555799999998888888744444 367888899999999999999988865443333444457
Q ss_pred HHHHHHHhhccCCCCcchhhHHHHHHHhhhhc
Q 004025 450 SLLKYLSKLQVDEEPAIRTNTTILLGNIASHL 481 (778)
Q Consensus 450 ~LL~~laklq~D~~~~IRtnt~icl~kIa~~L 481 (778)
.++|.|..|..|++.-||-...=.|.-|++.=
T Consensus 178 ~ll~iL~~L~~D~s~yVrKSVan~LrD~SK~~ 209 (240)
T 3l9t_A 178 EAIRRIADLKEDVSEYVRKSVGNALRDISKKF 209 (240)
T ss_dssp HHHHHHHTTTTCSCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCChHHHHHHHHHHHHHHHhhhC
Confidence 79999999999999999999999998888764
|
| >1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A | Back alignment and structure |
|---|
Probab=86.19 E-value=1.8 Score=52.75 Aligned_cols=115 Identities=12% Similarity=0.106 Sum_probs=77.2
Q ss_pred hhhhhhhHHHHHHhhc------CChHHHHHHHHHhHHHHHhhcC--h---h------hhhhcchHHHHhhcCCC---cHH
Q 004025 367 EEFSVKVLPTIVKLFA------SNDRAIRVALLQHIDQYGQSFS--A---Q------VVDEQVYPHVATGFADT---SAF 426 (778)
Q Consensus 367 eef~~~i~P~i~~lF~------~~Dr~iR~~LL~~l~~~~~~l~--~---~------~v~~~I~P~l~~gf~Dt---~~~ 426 (778)
+.....+++.+...|. +.|+..|-+.|--|-.+.+++. . . .+..-+..+++..+.|. .+.
T Consensus 394 ~~v~~~~l~~i~~~l~~~~~~~~~~w~~reaal~algaia~~~~~~~~~~~~~~~~~~l~~~l~~~v~p~l~~~~~~~p~ 473 (960)
T 1wa5_C 394 VLVTNIFLAHMKGFVDQYMSDPSKNWKFKDLYIYLFTALAINGNITNAGVSSTNNLLNVVDFFTKEIAPDLTSNNIPHII 473 (960)
T ss_dssp HHHHHHHHHHHHHHHHHHHC----CHHHHHHHHHHHHHHHBSSCCBTTBCCCBCTTCCHHHHHHHHTHHHHHCSSCSCHH
T ss_pred hhHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHhccccCCcccccccccHHHHHHHHhHHHhcCCCCCCce
Confidence 3334455566666666 6778888777777777765431 1 1 12111112334445666 999
Q ss_pred HHHHHHHHHHhhhccCChhhHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcc
Q 004025 427 LREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLN 482 (778)
Q Consensus 427 iRe~tlksi~~l~pkL~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~ 482 (778)
||..++..+-.++..+... ....+|+.+.+...|+.+.||+.++.+|..++.+..
T Consensus 474 vr~~a~~~lg~~~~~~~~~-~l~~~l~~l~~~L~d~~~~V~~~A~~Al~~~~~~~~ 528 (960)
T 1wa5_C 474 LRVDAIKYIYTFRNQLTKA-QLIELMPILATFLQTDEYVVYTYAAITIEKILTIRE 528 (960)
T ss_dssp HHHHHHHHHHHTGGGSCHH-HHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTCBS
T ss_pred ehHHHHHHHHHHHhhCCHH-HHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHhccc
Confidence 9999999999999988654 456778877776678888999999999999888643
|
| >3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=84.50 E-value=3 Score=42.14 Aligned_cols=163 Identities=17% Similarity=0.129 Sum_probs=100.3
Q ss_pred chHHHHHHHHhhCCCCch----hhHHHHHhccCCC---hhhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhh---cC
Q 004025 335 KLLPLLASALEFGSAAAP----ALTALLKMGSWLS---TEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQS---FS 404 (778)
Q Consensus 335 kILP~Ll~~~~~~~~~~~----~L~~llki~~~l~---~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~---l~ 404 (778)
.-+|.|++.+..++.... ...-+..++..-+ ..-+..-.+|.++.++.+.+..++.....-|..+... -.
T Consensus 8 ~~i~~lV~lL~s~~~~~~~q~~Aa~~l~~L~~~~~~~r~~I~~~G~Ip~LV~lL~s~~~~vq~~Aa~aL~nLa~~~~~nk 87 (233)
T 3tt9_A 8 MTLERAVSMLEADHMLPSRISAAATFIQHECFQKSEARKRVNQLRGILKLLQLLKVQNEDVQRAVCGALRNLVFEDNDNK 87 (233)
T ss_dssp CCHHHHHHTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHH
T ss_pred ccHHHHHHHhCCCCchHHHHHHHHHHHHHHHcCCcHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHH
Confidence 457888877765543111 1122223332111 1224445689999999999998887766666666542 12
Q ss_pred hhhhhhcchHHHHhhcCC-CcHHHHHHHHHHHHhhhc--cCChhhHhHHHHHHHHhhcc-------C---------CCCc
Q 004025 405 AQVVDEQVYPHVATGFAD-TSAFLREMTLKSMLVLAP--KLSQRTISGSLLKYLSKLQV-------D---------EEPA 465 (778)
Q Consensus 405 ~~~v~~~I~P~l~~gf~D-t~~~iRe~tlksi~~l~p--kL~~~~l~~~LL~~laklq~-------D---------~~~~ 465 (778)
..++..--+|.|+..+.+ .+..+||.+..++..+.- ......+. +-+|.|..+-. | .++.
T Consensus 88 ~~I~~~GaI~~Lv~lL~~~~~~~~~e~a~~aL~nLS~~~~~k~~i~~-~~i~~Lv~ll~~p~sG~~~~~~~~~~~~~~~~ 166 (233)
T 3tt9_A 88 LEVAELNGVPRLLQVLKQTRDLETKKQITGLLWNLSSNDKLKNLMIT-EALLTLTENIIIPFSGWPEGDYPKANGLLDFD 166 (233)
T ss_dssp HHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTSGGGHHHHHH-HHHHHHCCCCCHHHHCCCGGGCCCCCTTCCHH
T ss_pred HHHHHcCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcChhhHHHHHh-ccHHHHHHHHhccccCCcccccccccccchHH
Confidence 335555679999999974 688999998877776653 23333333 44566655321 1 1458
Q ss_pred chhhHHHHHHHhhhhcccccchhh-----hHHHHHhhhhc
Q 004025 466 IRTNTTILLGNIASHLNEGTRKRV-----LINAFTVRALR 500 (778)
Q Consensus 466 IRtnt~icl~kIa~~L~~~~~~~v-----L~~af~~~~lk 500 (778)
|+.|++-||..++.. +++.|+.+ |++++. ..++
T Consensus 167 v~~na~~~L~nLss~-~~~~R~~~r~~~Gli~~Lv-~~l~ 204 (233)
T 3tt9_A 167 IFYNVTGCLRNMSSA-GADGRKAMRRCDGLIDSLV-HYVR 204 (233)
T ss_dssp HHHHHHHHHHHHTTS-CHHHHHHHHTSTTHHHHHH-HHHH
T ss_pred HHHHHHHHHHHHhcC-CHHHHHHHHHCCCcHHHHH-HHHH
Confidence 999999999999874 34555544 455555 4444
|
| >2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=83.80 E-value=2.8 Score=51.03 Aligned_cols=122 Identities=16% Similarity=0.122 Sum_probs=82.1
Q ss_pred HHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCC-----CcHHHHHHHHHHHHhhhccCChhh--HhHHHHHHHHhhc
Q 004025 387 AIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFAD-----TSAFLREMTLKSMLVLAPKLSQRT--ISGSLLKYLSKLQ 459 (778)
Q Consensus 387 ~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~D-----t~~~iRe~tlksi~~l~pkL~~~~--l~~~LL~~laklq 459 (778)
..|..+-+-|..+...++ +.+-..+++.+...+.. .+-..||.++.++-.++..+.... ....+++.|..+.
T Consensus 436 ~~R~~~~~~l~~~~~~~~-~~~l~~~~~~l~~~l~~~~~~~~~w~~~eaal~~l~~iae~~~~~~~~~l~~l~~~l~~l~ 514 (971)
T 2x1g_F 436 CYRQDISDTFMYCYDVLN-DYILEILAAMLDEAIADLQRHPTHWTKLEACIYSFQSVAEHFGGEEKRQIPRLMRVLAEIP 514 (971)
T ss_dssp HHHHHHHHHHHHHHTTCT-THHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHTTTC------CHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHHhhcChhhhHHHHHHHHHHHhcC
Confidence 467777777777777777 44455677776666543 567899999999999999887532 3355777777776
Q ss_pred c-CCCCcchhhHHHHHHHhhhhccccc-chhhhHHHHHhhhhcCCCchhhhheeee
Q 004025 460 V-DEEPAIRTNTTILLGNIASHLNEGT-RKRVLINAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 460 ~-D~~~~IRtnt~icl~kIa~~L~~~~-~~~vL~~af~~~~lkD~f~~~R~A~l~a 513 (778)
. |..|.||..++-+||+++..+.... --.-+++.+. +.| | ++++.+|..+
T Consensus 515 ~~d~~~~vr~~a~~~l~~~~~~l~~~~~~l~~vl~~l~-~~l-~--~~v~~~A~~a 566 (971)
T 2x1g_F 515 YEKLNVKLLGTALETMGSYCNWLMENPAYIPPAINLLV-RGL-N--SSMSAQATLG 566 (971)
T ss_dssp TTTSCHHHHHHHHHHHHHTHHHHC----CHHHHHHHHH-HHH-H--SSCHHHHHHH
T ss_pred ccccCHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH-HHh-C--hHHHHHHHHH
Confidence 4 6789999999999999999998432 1223355555 677 6 4556655555
|
| >3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.32 E-value=2.7 Score=46.82 Aligned_cols=154 Identities=10% Similarity=0.080 Sum_probs=100.6
Q ss_pred hhhhchHHHHHHHHhhCCCCchhh----HHHHHhccCCC--hhhh--hhhhHHHHHHhhcCChH----HHH---HHHHHh
Q 004025 331 IVLKKLLPLLASALEFGSAAAPAL----TALLKMGSWLS--TEEF--SVKVLPTIVKLFASNDR----AIR---VALLQH 395 (778)
Q Consensus 331 ~~~~kILP~Ll~~~~~~~~~~~~L----~~llki~~~l~--~eef--~~~i~P~i~~lF~~~Dr----~iR---~~LL~~ 395 (778)
+.....+|.|++.+.... ...++ ..+..++...+ ...+ ..-.+|.|+.++...+. .++ ...|.|
T Consensus 282 I~~~GaI~~LV~lLl~s~-~~~v~~~A~~aL~nLs~~~~~nk~~I~~~~Gal~~Lv~LL~~~~~~~~~~v~~~A~~aL~n 360 (458)
T 3nmz_A 282 LREVGSVKALMECALEVK-KESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRN 360 (458)
T ss_dssp HHHTTHHHHHHHHHTTCC-SHHHHHHHHHHHHHHHHHCHHHHHHHHHSTTHHHHHHHHTTCCCSSSTTHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHhcCC-CHHHHHHHHHHHHHHccCCHHHHHHHHHhcCcHHHHHHHhcCCCCcchHHHHHHHHHHHHH
Confidence 444567899988754322 12222 23334443221 2333 34578999999876543 244 456667
Q ss_pred HHHHH---hhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhcc---CChhhHhHHHHHHHHhhccCCCCcchhh
Q 004025 396 IDQYG---QSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPK---LSQRTISGSLLKYLSKLQVDEEPAIRTN 469 (778)
Q Consensus 396 l~~~~---~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pk---L~~~~l~~~LL~~laklq~D~~~~IRtn 469 (778)
|..++ +.--...++...+|.++..+.+.+..+++.++.+|..++-. --...+....+|.|..|.......||.+
T Consensus 361 Ls~~~a~~~~~~~~i~~~G~i~~Lv~LL~~~~~~v~~~A~~aL~nLa~~~~~~~~~i~~~G~I~~Lv~LL~s~~~~v~~~ 440 (458)
T 3nmz_A 361 VSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIHSKHKMIAMG 440 (458)
T ss_dssp HHHHHTTCHHHHHHHHHTTHHHHHHHHSSCSCHHHHHHHHHHHHHHHSSCHHHHHHHHHHTHHHHHHTTTTCSSHHHHHH
T ss_pred HHhcccCCHHHHHHHHHcccHHHHHHHHcCCChHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHhCCCHHHHHH
Confidence 66542 12223345566899999999999999999999999988732 1112345567889999888888999999
Q ss_pred HHHHHHHhhhhccccc
Q 004025 470 TTILLGNIASHLNEGT 485 (778)
Q Consensus 470 t~icl~kIa~~L~~~~ 485 (778)
++-.|..|+.+-...+
T Consensus 441 Aa~AL~nL~~~~p~ky 456 (458)
T 3nmz_A 441 SAAALRNLMANRPAKY 456 (458)
T ss_dssp HHHHHHHHHTCCSCC-
T ss_pred HHHHHHHHHcCCHhhh
Confidence 9999999998754443
|
| >2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B | Back alignment and structure |
|---|
Probab=83.25 E-value=2.8 Score=50.82 Aligned_cols=121 Identities=11% Similarity=0.143 Sum_probs=84.6
Q ss_pred HHHHHHHhHHHHHhhcChhhhhhcchHHHHhhc----CCCcHHHHHHHHHHHHhhhccCCh--hhHhHHHHHHHHhhccC
Q 004025 388 IRVALLQHIDQYGQSFSAQVVDEQVYPHVATGF----ADTSAFLREMTLKSMLVLAPKLSQ--RTISGSLLKYLSKLQVD 461 (778)
Q Consensus 388 iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf----~Dt~~~iRe~tlksi~~l~pkL~~--~~l~~~LL~~laklq~D 461 (778)
.|..+.+-|..+...++.+ +-..+++.+...+ .+.+...||+++.++-.++..+.+ ......+++.|..+..
T Consensus 423 ~r~~~~~~L~~~~~~~~~~-~l~~~~~~l~~~l~~~~~~~~w~~~eaal~al~~i~~~~~~~~~~~l~~l~~~l~~l~~- 500 (963)
T 2x19_B 423 YRVDISDTLMYVYEMLGAE-LLSNLYDKLGRLLTSSEEPYSWQHTEALLYGFQSIAETIDVNYSDVVPGLIGLIPRISI- 500 (963)
T ss_dssp HHHHHHHHHHHHHHHHTHH-HHHHHHHHHHHHHHTCCCSCCHHHHHHHHHHHHHHTTSCCSSCCSHHHHHHHHGGGSCC-
T ss_pred HHHHHHHHHHHHHHHccHH-HHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHhhcCchhhHHHHHHHHHHHhCCC-
Confidence 3556556666666666644 4455666666666 677889999999999999998865 2344567777766654
Q ss_pred CCCcchhhHHHHHHHhhhhcccc-cchhhhHHHHHhhhhcCCCchhhhheeee
Q 004025 462 EEPAIRTNTTILLGNIASHLNEG-TRKRVLINAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 462 ~~~~IRtnt~icl~kIa~~L~~~-~~~~vL~~af~~~~lkD~f~~~R~A~l~a 513 (778)
+.+.||..++.+||+.+.++..+ .--.-+++.+. ..|.| ...|.+|..+
T Consensus 501 ~~~~vr~~~~~~l~~~~~~l~~~~~~l~~vl~~l~-~~l~~--~~V~~~A~~a 550 (963)
T 2x19_B 501 SNVQLADTVMFTIGALSEWLADHPVMINSVLPLVL-HALGN--PELSVSSVST 550 (963)
T ss_dssp CSHHHHHHHHHHHHHTHHHHHHCHHHHTTTHHHHH-HHTTC--GGGHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH-HHhCC--chHHHHHHHH
Confidence 47789999999999999998743 22334566666 77877 4556655555
|
| >3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A | Back alignment and structure |
|---|
Probab=82.78 E-value=2.2 Score=49.03 Aligned_cols=131 Identities=11% Similarity=0.089 Sum_probs=93.7
Q ss_pred hhhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhc---ChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccC
Q 004025 366 TEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSF---SAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKL 442 (778)
Q Consensus 366 ~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l---~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL 442 (778)
...|...-+|.++.+..+.|..++......|..+...- -..++....+|.|+..+.+.+..+|+.++.++-.|+-.=
T Consensus 42 ~~~~~~~~i~~LV~~L~s~~~~~q~~Aa~~L~~La~~~~~~k~~V~~~G~Ip~LV~LL~s~~~~vq~~Aa~AL~nLa~~~ 121 (584)
T 3l6x_A 42 PPNWRQPELPEVIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGR 121 (584)
T ss_dssp CCCCCCCCHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHGGGCSSHHHHHHHHHHHHHHTSSS
T ss_pred CCCcccccHHHHHHHHCCCCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCcHHHHHHHCCCCHHHHHHHHHHHHHHHccC
Confidence 34567777899999999999888877777666665432 223555667899999999999999999999999988521
Q ss_pred Ch----hhHhHHHHHHHHhhccC-CCCcchhhHHHHHHHhhhhcccccchhhh---HHHHHhhhh
Q 004025 443 SQ----RTISGSLLKYLSKLQVD-EEPAIRTNTTILLGNIASHLNEGTRKRVL---INAFTVRAL 499 (778)
Q Consensus 443 ~~----~~l~~~LL~~laklq~D-~~~~IRtnt~icl~kIa~~L~~~~~~~vL---~~af~~~~l 499 (778)
+. ..+...-+|.|.++... ....++-+++-||..|+. .++++..++ ++.+. +.|
T Consensus 122 ~~~nk~~I~~~GaIp~LV~LL~s~~~~~~~e~aa~aL~nLS~--~~~~k~~I~~~alp~Lv-~LL 183 (584)
T 3l6x_A 122 DQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSS--HDSIKMEIVDHALHALT-DEV 183 (584)
T ss_dssp CHHHHHHHHHTTHHHHHHHHHHHCCSHHHHHHHHHHHHHHTT--SGGGHHHHHHHTHHHHH-HHT
T ss_pred CHHHHHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHhC--CchhhHHHHhccHHHHH-HHH
Confidence 11 22334456666666653 567899999999999997 455555553 45555 544
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 778 | ||||
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 3e-15 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 5e-15 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 1e-13 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 2e-13 | |
| d1b3ua_ | 588 | a.118.1.2 (A:) Constant regulatory domain of prote | 2e-13 | |
| d1b3ua_ | 588 | a.118.1.2 (A:) Constant regulatory domain of prote | 3e-12 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 1e-12 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 1e-12 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 1e-12 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 2e-12 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 3e-12 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 3e-12 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 6e-12 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 1e-11 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 1e-11 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 1e-11 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 2e-11 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 3e-11 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 3e-11 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 4e-11 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 4e-11 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 5e-11 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 1e-10 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 1e-10 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 4e-10 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 4e-10 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 1e-09 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 2e-09 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 3e-09 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 3e-09 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 4e-09 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 4e-09 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 5e-09 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 7e-09 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 8e-09 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 2e-08 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 2e-08 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 4e-08 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 4e-08 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 8e-08 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 1e-07 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 1e-07 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 1e-07 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 5e-07 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 5e-07 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 6e-07 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 9e-07 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 1e-06 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 2e-06 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 2e-06 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 2e-06 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 2e-06 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 3e-06 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 3e-06 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 3e-06 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 7e-06 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 7e-06 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 1e-05 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 2e-05 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 2e-05 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 4e-05 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 4e-05 |
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 75.3 bits (184), Expect = 3e-15
Identities = 49/296 (16%), Positives = 108/296 (36%), Gaps = 21/296 (7%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
F+ + G V++ + N ++G A +K L+ ++H N++ + +
Sbjct: 27 FKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYN 86
Query: 97 STKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156
K +IY+V + + + + + +++ K++H ++
Sbjct: 87 RCKGSIYLVFD-FCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR-NKILHRDMK 144
Query: 157 LSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVG-AQYKPVELAKSDWTAVR 215
++V++T+ KL F + F N +Y V Y+P EL +
Sbjct: 145 AANVLITRDGVLKLADFGLARAFSLAK---NSQPNRYTNRVVTLWYRPPELLLGERDYGP 201
Query: 216 KSPPWSIDSWGLGCLIYELFSGMRL----SKTEELRNTASIPKSLLPDYQRLLSSMPS-R 270
D WG GC++ E+++ + ++ +L + + S+ P+ + +
Sbjct: 202 PI-----DLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYE 256
Query: 271 RLNSSKLIENSVGDFWMTEYFQNKLVDTIHFMEILNLK-----DSVEKDTFFRKLP 321
+L K + V D +D I + +L+ D FF P
Sbjct: 257 KLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDP 312
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.5 bits (180), Expect = 5e-15
Identities = 49/265 (18%), Positives = 93/265 (35%), Gaps = 40/265 (15%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
+ K DG + + + + + V LR ++HPNI+ +
Sbjct: 21 QKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDR----- 75
Query: 97 STKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYYAWG-LNQIAKAVSFL----NNDCK 149
T T+YIV E L+ I + E DE + + Q+ A+ +
Sbjct: 76 -TNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHT 134
Query: 150 LVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVEL-AK 208
++H ++ ++V + + KL F + + + A + ++ Q + K
Sbjct: 135 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEK 194
Query: 209 SDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTA---------SIPKSLLPD 259
SD W LGCL+YEL + M + A IP +
Sbjct: 195 SDI-------------WSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDE 241
Query: 260 YQRLLSSM----PSRRLNSSKLIEN 280
+++ M R + +++EN
Sbjct: 242 LNEIITRMLNLKDYHRPSVEEILEN 266
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 70.0 bits (171), Expect = 1e-13
Identities = 45/278 (16%), Positives = 95/278 (34%), Gaps = 37/278 (13%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
++ +K+ + I + ++ L + L + HPNI+ L + EN
Sbjct: 29 YKAQNKETSVLAAAKVIDTKSEEE--LEDYMVEIDILASCDHPNIVKLLDAFYYEN---- 82
Query: 97 STKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156
++I+ E + L LE + Q A+++L+ D K++H ++
Sbjct: 83 ----NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH-DNKIIHRDLK 137
Query: 157 LSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRK 216
+++ T D KL F V ++ + + + W P +
Sbjct: 138 AGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYW-----MAPEVVMCETSKDRPY 192
Query: 217 SPPWSIDSWGLGCLIYELFSGMR----LSKTEELRNTA-------SIPKSLLPDYQRLLS 265
D W LG + E+ L+ L A + P +++ L
Sbjct: 193 DY--KADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLK 250
Query: 266 SM----PSRRLNSSKLIENSVGDFWMTEYFQNKLVDTI 299
R +S+L+++ ++T + + I
Sbjct: 251 KCLEKNVDARWTTSQLLQHP----FVTVDSNKPIRELI 284
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.3 bits (169), Expect = 2e-13
Identities = 39/272 (14%), Positives = 88/272 (32%), Gaps = 41/272 (15%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
++ V++ + A D + + + + H N++ F NI
Sbjct: 22 QLAVNRVTEEAVAVKIVDMKRAVDCP-ENIKKEICINKMLNHENVVKFYGHRREGNI--- 77
Query: 97 STKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156
Y+ E E + + + +Q+ V +L+ + H ++
Sbjct: 78 -----QYLFLE-YCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH-GIGITHRDIK 130
Query: 157 LSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVG-AQYKPVELAKSDWTAVR 215
++++ + + K+ F + + F NN + G Y EL K R
Sbjct: 131 PENLLLDERDNLKISDFGLATVFRYNNRER-----LLNKMCGTLPYVAPELLKR-----R 180
Query: 216 KSPPWSIDSWGLGCLIYELFSG-----------MRLSKTEELRNTASIPKSLLPDYQRLL 264
+ +D W G ++ + +G S +E + + K + LL
Sbjct: 181 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 240
Query: 265 SSM----PSRRLNSSKLIENSVGDFWMTEYFQ 292
+ PS R+ + ++ W + +
Sbjct: 241 HKILVENPSARITIPDIKKDR----WYNKPLK 268
|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 588 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Constant regulatory domain of protein phosphatase 2a, pr65alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 71.4 bits (173), Expect = 2e-13
Identities = 38/196 (19%), Positives = 67/196 (34%), Gaps = 2/196 (1%)
Query: 301 FMEILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALT-ALLK 359
++ L +D + +KL +A L + +LLP L + AL L
Sbjct: 15 LIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGT 74
Query: 360 MGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATG 419
+ + E+ +LP + L + +R ++ + S ++ P V
Sbjct: 75 FTTLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRAISHEHSPSDLEAHFVPLVKRL 134
Query: 420 FADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIAS 479
R V P++S + L +Y L D+ P +R LG A
Sbjct: 135 AGGDWFTSRTSACGLFSVCYPRVSSA-VKAELRQYFRNLCSDDTPMVRRAAASKLGEFAK 193
Query: 480 HLNEGTRKRVLINAFT 495
L K +I F+
Sbjct: 194 VLELDNVKSEIIPMFS 209
|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 588 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Constant regulatory domain of protein phosphatase 2a, pr65alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.5 bits (163), Expect = 3e-12
Identities = 34/182 (18%), Positives = 66/182 (36%), Gaps = 2/182 (1%)
Query: 299 IHFMEILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAP--ALTA 356
+E+ + +P LA QL + +KL L + L A A +
Sbjct: 405 PAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSN 464
Query: 357 LLKMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHV 416
L K+ E ++P ++ + + R+ L I+ + + + + P V
Sbjct: 465 LKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTV 524
Query: 417 ATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGN 476
D A +R KS+ + P L T+ + L KL D++ ++ L
Sbjct: 525 LRMAGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLTQDQDVDVKYFAQEALTV 584
Query: 477 IA 478
++
Sbjct: 585 LS 586
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.0 bits (163), Expect = 1e-12
Identities = 45/275 (16%), Positives = 86/275 (31%), Gaps = 35/275 (12%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKR----LRTVRHPNILAFLHSTEVEN 92
+ G D PV+I + D V L+ V S +
Sbjct: 21 YSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG------FSGVIRL 74
Query: 93 IDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVH 152
+D + ++ E P+ + + G+ ++E Q+ +AV +N C ++H
Sbjct: 75 LDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN-CGVLH 133
Query: 153 GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVG-AQYKPVELAKSDW 211
++ ++++ + Y G Y P E W
Sbjct: 134 RDIKDENILIDLNRGELKLIDFGSGALLKDT--------VYTDFDGTRVYSPPE-----W 180
Query: 212 TAVRKSPPWSIDSWGLGCLIYELFSGMRL--SKTEELRNTASIPKSLLPDYQRLLSSM-- 267
+ S W LG L+Y++ G E +R + + + Q L+
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLA 240
Query: 268 --PSRRLNSSKLIENSVGDFWMTEYFQNKLVDTIH 300
PS R ++ + WM + + IH
Sbjct: 241 LRPSDRPTFEEIQNHP----WMQDVLLPQETAEIH 271
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 67.8 bits (165), Expect = 1e-12
Identities = 34/274 (12%), Positives = 86/274 (31%), Gaps = 44/274 (16%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
+ K G I+ D + +N + + + HP ++ + E +
Sbjct: 46 HRCVEKATGRVFVAKFINTPYPLDKY--TVKNEISIMNQLHHPKLINLHDAFEDKY---- 99
Query: 97 STKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWG-LNQIAKAVSFLNNDCKLVHGNV 155
+ ++ E + E + E + E + Q + + ++ + +VH ++
Sbjct: 100 ----EMVLILE-FLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH-EHSIVHLDI 153
Query: 156 CLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVR 215
+++ + + +F + +++ P + +
Sbjct: 154 KPENIMCETKKASSV----KIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYT 209
Query: 216 KSPPWSIDSWGLGCLIYELFSG------------MRLSKTEELRNTASIPKSLLPDYQRL 263
D W +G L Y L SG ++ K + S+ P+ +
Sbjct: 210 -------DMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDF 262
Query: 264 LSSM----PSRRLNSSKLIENSVGDFWMTEYFQN 293
+ ++ P +RL +E+ W+ N
Sbjct: 263 IKNLLQKEPRKRLTVHDALEHP----WLKGDHSN 292
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 67.0 bits (163), Expect = 1e-12
Identities = 46/308 (14%), Positives = 101/308 (32%), Gaps = 50/308 (16%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
K V+I I+ A +G + N + L ++HPNI+A E
Sbjct: 26 ILAEDKRTQKLVAIKCIA-KKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGG---- 80
Query: 97 STKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154
+Y++ + L ++I E G + + Q+ AV +L+ D +VH +
Sbjct: 81 ----HLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF---QVLDAVKYLH-DLGIVHRD 132
Query: 155 VCLSSVVVTQTLD---WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDW 211
+ +++ + + F LS+ + + ++ P LA+ +
Sbjct: 133 LKPENLLYYSLDEDSKIMISDFG-LSKMEDPGSVLSTACGTPGYVA-----PEVLAQKPY 186
Query: 212 TAVRKSPPWSIDSWGLGCLIYELFSG------------MRLSKTEELRNTASIPKSLLPD 259
+ ++D W +G + Y L G E + +
Sbjct: 187 SK-------AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDS 239
Query: 260 YQRLLSSM----PSRRLNSSKLIENS--VGDFWMTEYFQNKLVDTI-HFMEILNLKDSVE 312
+ + + P +R + +++ GD + + + + I K +
Sbjct: 240 AKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKNFAKSKWKQAFN 299
Query: 313 KDTFFRKL 320
R +
Sbjct: 300 ATAVVRHM 307
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 66.2 bits (161), Expect = 2e-12
Identities = 34/276 (12%), Positives = 88/276 (31%), Gaps = 41/276 (14%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFL--HSTEVENID 94
+ K ++ I T + + + +IL + H ++ D
Sbjct: 20 RRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATL--KEVDILRKVSGHPNIIQLKD 77
Query: 95 ATSTKITIYIVTE--PVMPLSEKIKELG-LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLV 151
T ++V + L + + E L + + + + + + L+ +V
Sbjct: 78 TYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKI----MRALLEVICALH-KLNIV 132
Query: 152 HGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVG-AQYKPVELAKSD 210
H ++ ++++ ++ KL F + D + + G Y E+ +
Sbjct: 133 HRDLKPENILLDDDMNIKLTDFGFSCQLDPGE--------KLREVCGTPSYLAPEIIECS 184
Query: 211 WTAVRKSPPWSIDSWGLGCLIYELFSG------------MRLSKTEELRNTASIPKSLLP 258
+D W G ++Y L +G +R+ + + +
Sbjct: 185 MNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSD 244
Query: 259 DYQRLLSSM----PSRRLNSSKLIENSVGDFWMTEY 290
+ L+S P +R + + + + + +Y
Sbjct: 245 TVKDLVSRFLVVQPQKRYTAEEALAHP----FFQQY 276
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.8 bits (160), Expect = 3e-12
Identities = 37/258 (14%), Positives = 91/258 (35%), Gaps = 40/258 (15%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
+ G V+I ++ N + +R ++PNI+ +L S V +
Sbjct: 37 YTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNPNIVNYLDSYLVGD---- 90
Query: 97 STKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156
+++V E + S + ++ E + A + +A+ FL+ +++H ++
Sbjct: 91 ----ELWVVMEYLAGGS--LTDVVTETCMDEGQIAAVCRECLQALEFLH-SNQVIHRDIK 143
Query: 157 LSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRK 216
++++ KL F ++ + + W+ P + + +
Sbjct: 144 SDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWM-----APEVVTRKAYGP--- 195
Query: 217 SPPWSIDSWGLGCLIYELFSGMRL----SKTEELRN-------TASIPKSLLPDYQRLLS 265
+D W LG + E+ G + L P+ L ++ L+
Sbjct: 196 ----KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLN 251
Query: 266 SM----PSRRLNSSKLIE 279
+R ++ +L++
Sbjct: 252 RCLDMDVEKRGSAKELLQ 269
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 66.2 bits (161), Expect = 3e-12
Identities = 46/309 (14%), Positives = 99/309 (32%), Gaps = 52/309 (16%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGH-LAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95
+ + V+I +S + Q V+ L+ +RHPN + + E+
Sbjct: 32 YFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH--- 88
Query: 96 TSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNV 155
T ++V E S + ++ A + + +++L + ++H +V
Sbjct: 89 -----TAWLVME-YCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYL-HSHNMIHRDV 141
Query: 156 CLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAW--LVGAQYKPVELAKSDWTA 213
++++++ KL F + + G A ++ + K D
Sbjct: 142 KAGNILLSEPGLVKLGDFG-SASIMAPANSFVGTPYWMAPEVILAMDEGQYD-GKVDV-- 197
Query: 214 VRKSPPWSIDSWGLGCLIYELFSGMR----LSKTEELRNTAS------IPKSLLPDYQRL 263
W LG EL ++ L + A ++
Sbjct: 198 -----------WSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNF 246
Query: 264 LSSM----PSRRLNSSKLIENSVGDFWMTEYFQNKLVDTIHFMEILNLKDSVE--KDTFF 317
+ S P R S L+++ + + T+ I KD+V + +
Sbjct: 247 VDSCLQKIPQDRPTSEVLLKH--------RFVLRERPPTVIMDLIQRTKDAVRELDNLQY 298
Query: 318 RKLPNLAEQ 326
RK+ + Q
Sbjct: 299 RKMKKILFQ 307
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.6 bits (157), Expect = 6e-12
Identities = 47/267 (17%), Positives = 97/267 (36%), Gaps = 43/267 (16%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95
+ K +++ + + G R V+ +RHPNIL
Sbjct: 23 YLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT--- 79
Query: 96 TSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNV 155
+Y++ E PL +EL ++ A + ++A A+S+ + +++H ++
Sbjct: 80 -----RVYLILEY-APLGTVYRELQKLSKFDEQRTATYITELANALSYCH-SKRVIHRDI 132
Query: 156 CLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVG-AQYKPVELAKSDWTAV 214
++++ + K+ F + + P + L G Y P E+ +
Sbjct: 133 KPENLLLGSAGELKIADFGW---------SVHAPSSRRTTLCGTLDYLPPEMIE------ 177
Query: 215 RKSPPWSIDSWGLGCLIYELFSGMRLSKTEE--------LRNTASIPKSLLPDYQRLLSS 266
+ +D W LG L YE G + R + P + + L+S
Sbjct: 178 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR 237
Query: 267 M----PSRRLNSSKLIENSVGDFWMTE 289
+ PS+R +++E+ W+T
Sbjct: 238 LLKHNPSQRPMLREVLEHP----WITA 260
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.1 bits (155), Expect = 1e-11
Identities = 26/213 (12%), Positives = 66/213 (30%), Gaps = 22/213 (10%)
Query: 42 KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKIT 101
K G V++ S + A + + +RH NIL F+ + +N T
Sbjct: 23 KWRGEEVAVKIFSSREERSWFREAE---IYQTVMLRHENILGFIAADNKDN----GTWTQ 75
Query: 102 IYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDC-------KLVH 152
+++V++ L + + + + A ++ L+ + + H
Sbjct: 76 LWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL----STASGLAHLHMEIVGTQGKPAIAH 131
Query: 153 GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWT 212
++ +++V + + + D + + Y E+
Sbjct: 132 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR--YMAPEVLDDSIN 189
Query: 213 AVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE 245
D + +G + +E+ + E
Sbjct: 190 MKHFESFKRADIYAMGLVFWEIARRCSIGGIHE 222
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 64.3 bits (156), Expect = 1e-11
Identities = 44/271 (16%), Positives = 98/271 (36%), Gaps = 44/271 (16%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
+ T + G+ + + + D R ++ + +RHP ++ + E +N
Sbjct: 43 HRVTERATGNNFAAKFVMTPHESD--KETVRKEIQTMSVLRHPTLVNLHDAFEDDN---- 96
Query: 97 STKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWG-LNQIAKAVSFLNNDCKLVHGNV 155
+ ++ E M E +++ E ++ E A + Q+ K + ++ + VH ++
Sbjct: 97 ----EMVMIYE-FMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH-ENNYVHLDL 150
Query: 156 CLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVR 215
+++ T +L L +F G + A++ E+A+
Sbjct: 151 KPENIMFTTKRSNEL----KLIDF-GLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYY 205
Query: 216 KSPPWSIDSWGLGCLIYELFSG------------MRLSKTEELRNTASIPKSLLPDYQRL 263
D W +G L Y L SG +R K+ + S + D +
Sbjct: 206 ------TDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDF 259
Query: 264 LSSM----PSRRLNSSKLIENSVGDFWMTEY 290
+ + P+ R+ + +E+ W+T
Sbjct: 260 IRKLLLADPNTRMTIHQALEHP----WLTPG 286
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 63.5 bits (154), Expect = 1e-11
Identities = 45/256 (17%), Positives = 85/256 (33%), Gaps = 48/256 (18%)
Query: 42 KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKIT 101
G+ V++ I D A + +RH N++ L K
Sbjct: 27 DYRGNKVAVKCIK----NDATAQAFLAEASVMTQLRHSNLVQLLGVI-------VEEKGG 75
Query: 102 IYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSS 159
+YIVTE + L + ++ G D + L + +A+ +L VH ++ +
Sbjct: 76 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL-DVCEAMEYLE-GNNFVHRDLAARN 133
Query: 160 VVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYA--WLVGAQYKPVELAKSDWTAVRKS 217
V+V++ K+ F + E + P+ A L ++ KSD
Sbjct: 134 VLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFST----KSDV------ 183
Query: 218 PPWSIDSWGLGCLIYELFSGMRLSKTEELRNTA----------SIPKSLLPDYQRLLSSM 267
W G L++E++S R+ P P ++ +
Sbjct: 184 -------WSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNC 236
Query: 268 ----PSRRLNSSKLIE 279
+ R + +L E
Sbjct: 237 WHLDAAMRPSFLQLRE 252
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 63.1 bits (153), Expect = 2e-11
Identities = 40/263 (15%), Positives = 87/263 (33%), Gaps = 43/263 (16%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
++G + V+ + + + L+ ++HPNI+ F S E
Sbjct: 26 YKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWE----STV 81
Query: 97 STKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFL-NNDCKLVHG 153
K I +VTE L +K + + + QI K + FL ++H
Sbjct: 82 KGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCR---QILKGLQFLHTRTPPIIHR 138
Query: 154 NVCLSSVVVT-QTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVG-AQYKPVELAKSDW 211
++ ++ +T T K+ L+ + A ++G ++ E+ + +
Sbjct: 139 DLKCDNIFITGPTGSVKIGDLG-LATLKRASFAKA--------VIGTPEFMAPEMYEEKY 189
Query: 212 TAVRKSPPWSIDSWGLGCLIYELFSGMR-----------LSKTEELRNTASIPKSLLPDY 260
S+D + G + E+ + + AS K +P+
Sbjct: 190 DE-------SVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEV 242
Query: 261 QRLLSSM----PSRRLNSSKLIE 279
+ ++ R + L+
Sbjct: 243 KEIIEGCIRQNKDERYSIKDLLN 265
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 63.2 bits (153), Expect = 3e-11
Identities = 36/208 (17%), Positives = 69/208 (33%), Gaps = 34/208 (16%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
F+ + K G ++ I + ++ L P I+ F + +
Sbjct: 23 FKVSHKPSGLVMARKLIH-LEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG---- 77
Query: 97 STKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154
I I E + L + +K+ G Q + + K +++L K++H +
Sbjct: 78 ----EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI---AVIKGLTYLREKHKIMHRD 130
Query: 155 VCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYA---WLVGAQYKPVELAKSDW 211
V S+++V + KL F V + + + Y L G Y +SD
Sbjct: 131 VKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSV----QSDI 186
Query: 212 TAVRKSPPWSIDSWGLGCLIYELFSGMR 239
W +G + E+ G
Sbjct: 187 -------------WSMGLSLVEMAVGRY 201
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.7 bits (151), Expect = 3e-11
Identities = 35/203 (17%), Positives = 77/203 (37%), Gaps = 21/203 (10%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
F+ +++ V++ + + +G ++A + L+ ++H NI V D
Sbjct: 19 FKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI--------VRLHDVL 70
Query: 97 STKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156
+ + +V E +K + G E L Q+ K + F ++ ++H ++
Sbjct: 71 HSDKKLTLVFEFCDQDLKKYFD-SCNGDLDPEIVKSFLFQLLKGLGFCHS-RNVLHRDLK 128
Query: 157 LSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRK 216
++++ + + KL F + F + ++ + P L +
Sbjct: 129 PQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWY-----RPPDVLFGAKLY---- 179
Query: 217 SPPWSIDSWGLGCLIYELFSGMR 239
SID W GC+ EL + R
Sbjct: 180 --STSIDMWSAGCIFAELANAGR 200
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.8 bits (152), Expect = 4e-11
Identities = 43/318 (13%), Positives = 93/318 (29%), Gaps = 52/318 (16%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
+ + + + L RH NIL S E
Sbjct: 22 HRCVETSSKKTYMAKFVKVKGTDQ---VLVKKEISILNIARHRNILHLHESFESME---- 74
Query: 97 STKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154
+ ++ E + + E+I E ++R+ ++Q+ +A+ FL+ + H +
Sbjct: 75 ----ELVMIFEFISGLDIFERINTSAFELNERE--IVSYVHQVCEALQFLH-SHNIGHFD 127
Query: 155 VCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAV 214
+ +++ + + F + G + + Y P +
Sbjct: 128 IRPENIIYQTRRSSTIKIIE----FGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVST- 182
Query: 215 RKSPPWSIDSWGLGCLIYELFSG------------MRLSKTEELRNTASIPKSLLPDYQR 262
+ D W LG L+Y L SG + E K + +
Sbjct: 183 ------ATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMD 236
Query: 263 LLSSM----PSRRLNSSKLIENSVGDFWMTEYFQNKLVDTIHFMEILNLKDSVEKDTFFR 318
+ + R+ +S+ +++ W+ + + I LK T +
Sbjct: 237 FVDRLLVKERKSRMTASEALQHP----WLKQKIERVSTKVIR-----TLKHRRYYHTLIK 287
Query: 319 KLPNLAEQLPRQIVLKKL 336
K N+ R +
Sbjct: 288 KDLNMVVSAARISCGGAI 305
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.6 bits (151), Expect = 4e-11
Identities = 42/244 (17%), Positives = 91/244 (37%), Gaps = 24/244 (9%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
++ +K G V++ I +G + A + L+ + HPNI V+ +D
Sbjct: 19 YKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI--------VKLLDVI 70
Query: 97 STKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156
T+ +Y+V E + +K + L Q+ + ++F ++ ++H ++
Sbjct: 71 HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-VLHRDLK 129
Query: 157 LSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRK 216
++++ KL F + F ++ + P L K
Sbjct: 130 PQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY-----RAPEILLGC------K 178
Query: 217 SPPWSIDSWGLGCLIYELFSGMRL----SKTEELRNTASIPKSLLPDYQRLLSSMPSRRL 272
++D W LGC+ E+ + L S+ ++L + ++SMP +
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 273 NSSK 276
+ K
Sbjct: 239 SFPK 242
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 62.8 bits (152), Expect = 5e-11
Identities = 32/260 (12%), Positives = 87/260 (33%), Gaps = 44/260 (16%)
Query: 37 FQGTSKDDGSPVSIFSIS----GTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92
+ D G ++ + + R + + T P I+ ++ +
Sbjct: 21 YGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD 80
Query: 93 IDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVH 152
+ + + +M + L G + + +I + ++ + +V+
Sbjct: 81 --------KLSFILD-LMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH-NRFVVY 130
Query: 153 GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQY-AWLVGAQYKPVELAKSDW 211
++ +++++ + ++ + +F A+ Y A V + + + +DW
Sbjct: 131 RDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYD-SSADW 189
Query: 212 TAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASI-----------PKSLLPDY 260
+ LGC++++L G + + ++ I P S P+
Sbjct: 190 -------------FSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPEL 236
Query: 261 QRLLSSM----PSRRLNSSK 276
+ LL + +RRL
Sbjct: 237 RSLLEGLLQRDVNRRLGCLG 256
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.2 bits (148), Expect = 1e-10
Identities = 39/277 (14%), Positives = 97/277 (35%), Gaps = 35/277 (12%)
Query: 37 FQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95
+I + + ++ + + + HP + + + +
Sbjct: 25 VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE--- 81
Query: 96 TSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNV 155
+Y E +K + GS + + +I A+ +L+ ++H ++
Sbjct: 82 -----KLYFGLS-YAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG-IIHRDL 134
Query: 156 CLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVR 215
++++ + + ++ F ++ A +++ AQY EL
Sbjct: 135 KPENILLNEDMHIQITDFGTAKVLSPESKQAR----ANSFVGTAQYVSPELLTE------ 184
Query: 216 KSPPWSIDSWGLGCLIYELFSGMRLSKTEE--------LRNTASIPKSLLPDYQRLLSSM 267
KS S D W LGC+IY+L +G+ + ++ P+ P + L+ +
Sbjct: 185 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKL 244
Query: 268 ----PSRRLNSSKLIENSVGDFWMTEYFQNKLVDTIH 300
++RL ++ G +F++ + +H
Sbjct: 245 LVLDATKRLGCEEM--EGYGPLKAHPFFESVTWENLH 279
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 60.5 bits (146), Expect = 1e-10
Identities = 44/260 (16%), Positives = 90/260 (34%), Gaps = 34/260 (13%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95
V++ + A+D R + + HP I+A + E E
Sbjct: 24 HLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET--- 80
Query: 96 TSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNV 155
YIV E + + EG + + +A++F + ++H +V
Sbjct: 81 -PAGPLPYIVME-YVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH-QNGIIHRDV 137
Query: 156 CLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVG-AQYKPVELAKSDWTAV 214
++++++ T K+ F + + + Q A ++G AQY E A+
Sbjct: 138 KPANIMISATNAVKVMDFGIARAIADSGN----SVTQTAAVIGTAQYLSPEQAR------ 187
Query: 215 RKSPPWSIDSWGLGCLIYELFSG------------MRLSKTEELRNTASIPKSLLPDYQR 262
S D + LGC++YE+ +G E+ ++ + L D
Sbjct: 188 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDA 247
Query: 263 LLSSM----PSRRLNSSKLI 278
++ P R ++ +
Sbjct: 248 VVLKALAKNPENRYQTAAEM 267
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.7 bits (144), Expect = 4e-10
Identities = 42/258 (16%), Positives = 76/258 (29%), Gaps = 40/258 (15%)
Query: 37 FQGTSKDDGSPVSI--FSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94
F K +I D HP +
Sbjct: 19 FLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFL--------THMFC 70
Query: 95 ATSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVH 152
TK ++ V E + L I+ R +YA +I + FL+ +V+
Sbjct: 71 TFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAA---EIILGLQFLH-SKGIVY 126
Query: 153 GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWT 212
++ L ++++ + K+ F + E + N + P L +
Sbjct: 127 RDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDY-----IAPEILLGQKYN 181
Query: 213 AVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTA--------SIPKSLLPDYQRLL 264
S+D W G L+YE+ G ++ P+ L + + LL
Sbjct: 182 H-------SVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLL 234
Query: 265 SSM----PSRRLNSSKLI 278
+ P +RL I
Sbjct: 235 VKLFVREPEKRLGVRGDI 252
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.8 bits (142), Expect = 4e-10
Identities = 46/270 (17%), Positives = 96/270 (35%), Gaps = 56/270 (20%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
++G D V++ ++ T L A +N V LR RH NIL F+
Sbjct: 25 YKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM---------GY 72
Query: 97 STKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154
ST + IVT+ L + + + Q A+ + +L+ ++H +
Sbjct: 73 STAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI--ARQTAQGMDYLHAKS-IIHRD 129
Query: 155 VCLSSVVVTQTLDWKLHAF---DVLSEFDGNNEAAN--GPMLQYAW--LVGAQYKPVELA 207
+ +++ + + L K+ F V S + G+++ G +L A + P
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS-F 188
Query: 208 KSDWTAVRKSPPWSIDSWGLGCLIYELFSG--------------MRLSKTEELRNTASIP 253
+SD + G ++YEL +G + + + + +
Sbjct: 189 QSDV-------------YAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVR 235
Query: 254 KSLLPDYQRLLSSM----PSRRLNSSKLIE 279
+ +RL++ R +++
Sbjct: 236 SNCPKAMKRLMAECLKKKRDERPLFPQILA 265
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.8 bits (139), Expect = 1e-09
Identities = 35/260 (13%), Positives = 78/260 (30%), Gaps = 50/260 (19%)
Query: 42 KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKIT 101
K V++ + ++ + +P I+ + E E+
Sbjct: 31 KKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAES--------- 81
Query: 102 IYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVV 161
+V E + L K L +D+ ++Q++ + +L VH ++ +V+
Sbjct: 82 WMLVME-MAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE-SNFVHRDLAARNVL 139
Query: 162 VTQTLDWKLHAFDVLSEFDGNNEAAN------GPMLQYA--WLVGAQYKPVELAKSDWTA 213
+ K+ F + + P+ YA + ++ KSD
Sbjct: 140 LVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS----KSDV-- 193
Query: 214 VRKSPPWSIDSWGLGCLIYEL-------FSGMRLSKTEEL---RNTASIPKSLLPDYQRL 263
W G L++E + GM+ S+ + P + L
Sbjct: 194 -----------WSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDL 242
Query: 264 LSSM----PSRRLNSSKLIE 279
++ R + +
Sbjct: 243 MNLCWTYDVENRPGFAAVEL 262
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.9 bits (139), Expect = 2e-09
Identities = 49/334 (14%), Positives = 107/334 (32%), Gaps = 39/334 (11%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
+Q D G V+I + ++ +R + H NI+ + +
Sbjct: 37 YQAKLCDSGELVAIKKVLQDKRF------KNRELQIMRKLDHCNIVRLRYF--FYSSGEK 88
Query: 97 STKITIYIVTEPVMPLSEKIKELGLEGSQR-DEYYAWG-LNQIAKAVSFLNNDCKLVHGN 154
++ + +V + V ++ Q Y + Q+ +++++++ + H +
Sbjct: 89 KDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-SFGICHRD 147
Query: 155 VCLSSVVVTQ-TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTA 213
+ ++++ T KL F + P + Y + + +D+T+
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-----PNVSYICSRYYRAPELIFGATDYTS 202
Query: 214 VRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT-ASIPKSLLPDYQRLLSSMPSRRL 272
SID W GC++ EL G + + + I K L + + M
Sbjct: 203 -------SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 255
Query: 273 NSSKLIENSVGDFWMTEYFQNKLVDTIHFMEILNLKDSVE--------KDTFFRKLPNLA 324
W + + I L +FF +L +
Sbjct: 256 EFK--FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 313
Query: 325 EQLPRQIVLKKLLPLLASALEFGSAAAPALTALL 358
+LP + P L + ++ P L +L
Sbjct: 314 VKLPN----GRDTPALFNFTTQELSSNPPLATIL 343
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.6 bits (136), Expect = 3e-09
Identities = 40/253 (15%), Positives = 84/253 (33%), Gaps = 41/253 (16%)
Query: 43 DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITI 102
+ + V++ S+ + ++ ++H ++ E I
Sbjct: 35 NGHTKVAVKSLKQGSMSPDAF---LAEANLMKQLQHQRLVRLYAVVTQEP---------I 82
Query: 103 YIVTEPVMPLSEKIKELGLEGSQRDEYYAWGL-NQIAKAVSFLNNDCKLVHGNVCLSSVV 161
YI+TE + S G + + QIA+ ++F+ + +H ++ ++++
Sbjct: 83 YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI-EERNYIHRDLRAANIL 141
Query: 162 VTQTLDWKLHAFDVLSEFDGNN-EAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPW 220
V+ TL K+ F + + N A G W P + +T
Sbjct: 142 VSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW-----TAPEAINYGTFTI------- 189
Query: 221 SIDSWGLGCLIYELFSGMRL-----SKTEELRNTASIPKSLLPDY---------QRLLSS 266
D W G L+ E+ + R+ + E ++N + + PD +
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKE 249
Query: 267 MPSRRLNSSKLIE 279
P R L
Sbjct: 250 RPEDRPTFDYLRS 262
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.2 bits (137), Expect = 3e-09
Identities = 48/296 (16%), Positives = 105/296 (35%), Gaps = 27/296 (9%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
+ V+I IS Q + +K L RH NI+ I+
Sbjct: 25 CSAYDNVNKVRVAIKKISPFEHQ-TYCQRTLREIKILLRFRHENIIGINDIIRAPTIE-- 81
Query: 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNV 155
+Y+VT + L + +K L + I + + ++ + ++H ++
Sbjct: 82 -QMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQ----ILRGLKYI-HSANVLHRDL 135
Query: 156 CLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVR 215
S++++ T D K+ F + D ++ + ++ Y+ E+ + +
Sbjct: 136 KPSNLLLNTTCDLKICDFGLARVADPDH---DHTGFLTEYVATRWYRAPEIMLNSKGYTK 192
Query: 216 KSPPWSIDSWGLGCLIYELFSGMRL----SKTEELRNTASIPKSLLPDYQRLLSSMPSRR 271
ID W +GC++ E+ S + ++L + I S + + ++ +R
Sbjct: 193 S-----IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 247
Query: 272 LNSSKLIENSVGDFWMTEYFQNKLVDTIHFMEILNLKD--SVE---KDTFFRKLPN 322
S +N V + +K +D + M N VE + + +
Sbjct: 248 YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 303
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.6 bits (136), Expect = 4e-09
Identities = 44/295 (14%), Positives = 101/295 (34%), Gaps = 47/295 (15%)
Query: 73 LRTVRHPNILAFLHSTEVENIDATSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYY 130
R + P+I+ + E + + + + IV E L +I++ G + E
Sbjct: 59 WRASQCPHIVRIVDVYE----NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 114
Query: 131 AWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPM 190
+ I +A+ +L+ + H +V +++ T + +A L++F E +
Sbjct: 115 EI-MKSIGEAIQYLH-SINIAHRDVKPENLLYT---SKRPNAILKLTDFGFAKETTSHNS 169
Query: 191 LQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG------------- 237
L P L + S D W LG ++Y L G
Sbjct: 170 LTTPCYTPYYVAPEVLGPEKYDK-------SCDMWSLGVIMYILLCGYPPFYSNHGLAIS 222
Query: 238 ---MRLSKTEELRNTASIPKSLLPDYQRLLSSM----PSRRLNSSKLIENSVGDFWMTEY 290
+ + + + + L+ ++ P++R+ ++ + + W+ +
Sbjct: 223 PGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP----WIMQS 278
Query: 291 FQ--NKLVDTIHFMEILNLKDSVEKDTFFRKLPNL---AEQLPRQIVLKKLLPLL 340
+ + T ++ + K+ L + EQ+ + + PLL
Sbjct: 279 TKVPQTPLHTSRVLKEDKERWEDVKEEMTSALATMRVDYEQIKIKKIEDASNPLL 333
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.4 bits (135), Expect = 4e-09
Identities = 38/204 (18%), Positives = 78/204 (38%), Gaps = 24/204 (11%)
Query: 42 KDDGSPVSIFSISGTNAQDGHLAAARNGV---KRLRTVRHPNILAFLHSTEVENIDATST 98
K+ G V++ + ++G + V + L T HPN++ +V + T
Sbjct: 30 KNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLF---DVCTVSRTDR 86
Query: 99 KITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLS 158
+ + +V E V + E E + Q+ + + FL+ ++VH ++
Sbjct: 87 ETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH-SHRVVHRDLKPQ 145
Query: 159 SVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYK--PVELAKSDWTAVRK 216
+++VT + KL F + + + +V + P L +S +
Sbjct: 146 NILVTSSGQIKLADFGLARIYS--------FQMALTSVVVTLWYRAPEVLLQSSYAT--- 194
Query: 217 SPPWSIDSWGLGCLIYELFSGMRL 240
+D W +GC+ E+F L
Sbjct: 195 ----PVDLWSVGCIFAEMFRRKPL 214
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.9 bits (134), Expect = 5e-09
Identities = 46/282 (16%), Positives = 94/282 (33%), Gaps = 55/282 (19%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKR----LRTVRHPNILAFLHSTEVEN 92
+ K G + I + +R ++R L+ ++HPN++ E +
Sbjct: 27 KKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT 86
Query: 93 IDATSTKITIYIVTEPV---MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCK 149
+ ++ E V ++ L + E+ LN + S
Sbjct: 87 --------DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFD 138
Query: 150 LVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVG-AQYKPVELAK 208
L N+ L V + K+ F + + D NE + + G ++ E+
Sbjct: 139 LKPENIMLLDRNVPK-PRIKIIDFGLAHKIDFGNE--------FKNIFGTPEFVAPEIVN 189
Query: 209 SDWTAVRKSPPWSIDSWGLGCLIYELFSG----MRLSKTEELRNTASIPKSLLPDY---- 260
+ + D W +G + Y L SG + +K E L N +++ +Y
Sbjct: 190 YEPLGLE------ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 243
Query: 261 --------QRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQNK 294
+RLL P +R+ +++ + + K
Sbjct: 244 SALAKDFIRRLLVKDPKKRMTIQDSLQH--------PWIKPK 277
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.0 bits (134), Expect = 7e-09
Identities = 31/204 (15%), Positives = 78/204 (38%), Gaps = 20/204 (9%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
G+ V+I + + A ++ L+ +RH N++ L + +
Sbjct: 35 CSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPD--ETL 92
Query: 97 STKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156
Y+V + K+ + G R ++ + Q+ K + ++ + ++H ++
Sbjct: 93 DDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVY---QMLKGLRYI-HAAGIIHRDLK 148
Query: 157 LSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRK 216
++ V + + K+ F + + D ++V Y+ E+ +
Sbjct: 149 PGNLAVNEDCELKILDFGLARQADSE---------MTGYVVTRWYRAPEVILN-----WM 194
Query: 217 SPPWSIDSWGLGCLIYELFSGMRL 240
++D W +GC++ E+ +G L
Sbjct: 195 RYTQTVDIWSVGCIMAEMITGKTL 218
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.9 bits (134), Expect = 8e-09
Identities = 36/253 (14%), Positives = 86/253 (33%), Gaps = 35/253 (13%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95
K G ++ + +A + L+ RHP + A ++ + +
Sbjct: 22 ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD--- 78
Query: 96 TSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNV 155
++ + L + + +R +Y +I A+ + + +V+ ++
Sbjct: 79 ---RLCFVMEYANGGELFFHLSRERVFTEERARFYGA---EIVSALEY-LHSRDVVYRDI 131
Query: 156 CLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVR 215
L ++++ + K+ F + E + +L +
Sbjct: 132 KLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYL------------APEVLED 179
Query: 216 KSPPWSIDSWGLGCLIYELFSGMRLSKTEE--------LRNTASIPKSLLPDYQRLLSSM 267
++D WGLG ++YE+ G ++ L P++L P+ + LL+ +
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGL 239
Query: 268 ----PSRRLNSSK 276
P +RL
Sbjct: 240 LKKDPKQRLGGGP 252
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 54.7 bits (130), Expect = 2e-08
Identities = 54/337 (16%), Positives = 109/337 (32%), Gaps = 46/337 (13%)
Query: 20 PYNIGDPYPSA---------WGSWSH-FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNG 69
P G+PY A WG +S + + + V++ + + AA +
Sbjct: 3 PAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIV---RGDKVYTEAAEDE 59
Query: 70 VKRLRTVRHPNILAFLHSTEVENI--------DATSTKITIYIVTEPVMPLSEKIKELGL 121
+K L+ V + S +I + + +V E + + +
Sbjct: 60 IKLLQRVNDADNTK-EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYE 118
Query: 122 EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181
Y Q+ + +++ C ++H ++ +V++ D + + G
Sbjct: 119 HRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIV-DSPENLIQIKIADLG 177
Query: 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLS 241
N + +Y+ E+ D W CLI+EL +G L
Sbjct: 178 NACWYDEHYTNSIQ--TREYRSPEVLL------GAPWGCGADIWSTACLIFELITGDFLF 229
Query: 242 KTEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYFQNKLVDTIHF 301
+ +E + + LL +PS L + K + T + L+ I
Sbjct: 230 EPDEGHSYTK-DDDHIAQIIELLGELPSYLLRNGK--------YTRTFFNSRGLLRNISK 280
Query: 302 MEILNLKDSV-EKDTFFRKLPNLAEQLPRQIVLKKLL 337
++ L+D + EK F + L +L
Sbjct: 281 LKFWPLEDVLTEKYKFSKDEAKEISDF-----LSPML 312
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 53.7 bits (128), Expect = 2e-08
Identities = 41/249 (16%), Positives = 93/249 (37%), Gaps = 25/249 (10%)
Query: 42 KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKIT 101
+ G ++ I +G + + L+ ++H NI V+ D TK
Sbjct: 23 NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI--------VKLYDVIHTKKR 74
Query: 102 IYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVV 161
+ +V E + +K+ ++ EG L Q+ +++ + D +++H ++ +++
Sbjct: 75 LVLVFEHLDQDLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYCH-DRRVLHRDLKPQNLL 132
Query: 162 VTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWS 221
+ + + K+ F L+ G + W Y+ ++ K +
Sbjct: 133 INREGELKIADFG-LARAFGIPVRKYTHEIVTLW-----YRAPDVLMGS-----KKYSTT 181
Query: 222 IDSWGLGCLIYELFSGMRL----SKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKL 277
ID W +GC+ E+ +G L S+ ++L I + ++ +P N +
Sbjct: 182 IDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVY 241
Query: 278 IENSVGDFW 286
F
Sbjct: 242 EPLPWESFL 250
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 53.2 bits (127), Expect = 4e-08
Identities = 40/257 (15%), Positives = 88/257 (34%), Gaps = 36/257 (14%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
++G K V++ ++ + ++ ++HPN++ L E
Sbjct: 34 YEGVWKKYSLTVAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLGVCTREP---- 86
Query: 97 STKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156
I L + ++E + QI+ A+ +L +H ++
Sbjct: 87 --PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT-QISSAMEYL-EKKNFIHRDLA 142
Query: 157 LSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRK 216
+ +V + K+ F + G+ A+ P LA + ++ K
Sbjct: 143 ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK----WTAPESLAYNKFSI--K 196
Query: 217 SPPWSIDSWGLGCLIYEL-------FSGMRLSKTEEL---RNTASIPKSLLPDYQRLLSS 266
S W+ G L++E+ + G+ LS+ EL P+ L+ +
Sbjct: 197 SDVWA-----FGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 251
Query: 267 M----PSRRLNSSKLIE 279
PS R + +++ +
Sbjct: 252 CWQWNPSDRPSFAEIHQ 268
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.9 bits (126), Expect = 4e-08
Identities = 51/306 (16%), Positives = 101/306 (33%), Gaps = 36/306 (11%)
Query: 37 FQGTSKDDGSPVSIFSIS---GTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93
++ K+ V+I I + A+DG A +K L+ + HPNI+ L + ++
Sbjct: 15 YKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS- 73
Query: 94 DATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHG 153
I +V + + E I + A+ L + + +L+ ++H
Sbjct: 74 -------NISLVFDFMETDLEVIIKDNSLVLTPSHIKAYML-MTLQGLEYLHQHW-ILHR 124
Query: 154 NVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTA 213
++ +++++ + KL F + F + +V Y+ EL
Sbjct: 125 DLKPNNLLLDENGVLKLADFGLAKSFG------SPNRAYTHQVVTRWYRAPELLFGARMY 178
Query: 214 VRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASIPKSLLPDYQRLLSSMPSRRLN 273
D W +GC++ EL + + + + L P
Sbjct: 179 GVGV-----DMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTE--EQWPDMCSL 231
Query: 274 SSKLIENSVGDFWMTEYFQNKLVDTIHFMEILNLKDSVE--------KDTFFRKLPNLAE 325
+ S + F D + ++ L L + K +F P
Sbjct: 232 PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTP 291
Query: 326 --QLPR 329
QLPR
Sbjct: 292 GCQLPR 297
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.6 bits (125), Expect = 8e-08
Identities = 40/299 (13%), Positives = 102/299 (34%), Gaps = 29/299 (9%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
G V++ +S H ++ L+ ++H N++ L +
Sbjct: 35 CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV--FTPARSL 92
Query: 97 STKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156
+Y+VT + I + D++ + + QI + + ++ + ++H ++
Sbjct: 93 EEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYI-HSADIIHRDLK 148
Query: 157 LSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRK 216
S++ V + + K+ F + D ++ Y+ E+ +
Sbjct: 149 PSNLAVNEDCELKILDFGLARHTD---------DEMTGYVATRWYRAPEIMLNWM----- 194
Query: 217 SPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTAS-IPKSLLPDYQRLLSSMPSRRLNSS 275
++D W +GC++ EL +G L + + I + + LL + S +
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNY 254
Query: 276 KLIENSVGDFWMTEYFQNKLVDTIHFMEILNLKDSVE--------KDTFFRKLPNLAEQ 326
+ F + +E + + DS + +F + + ++
Sbjct: 255 IQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE 313
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 52.0 bits (124), Expect = 1e-07
Identities = 37/252 (14%), Positives = 78/252 (30%), Gaps = 40/252 (15%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95
S+ +G ++ + + + L V HP I +
Sbjct: 21 HLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFI--------IRMWGT 72
Query: 96 TSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGL-NQIAKAVSFLNNDCKLVHGN 154
I+++ + + ++ L + + A ++ A+ +L+ +++ +
Sbjct: 73 FQDAQQIFMIMDYIE--GGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLH-SKDIIYRD 129
Query: 155 VCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAV 214
+ ++++ + K+ F G Y E+ +
Sbjct: 130 LKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTP---------DYIAPEVVST----- 175
Query: 215 RKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTA--------SIPKSLLPDYQRLLSS 266
K SID W G LIYE+ +G T P D + LLS
Sbjct: 176 -KPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSR 234
Query: 267 M----PSRRLNS 274
+ S+RL +
Sbjct: 235 LITRDLSQRLGN 246
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 51.8 bits (123), Expect = 1e-07
Identities = 28/281 (9%), Positives = 73/281 (25%), Gaps = 44/281 (15%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
+ GT G V+I K + ++ + +
Sbjct: 24 YLGTDIAAGEEVAIKLECVKTKHP----QLHIESKIYKMMQGGVGIPTIR-------WCG 72
Query: 97 STKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156
+ +V E ++ S + + +Q+ + +++ +H +V
Sbjct: 73 AEGDYNVMVME-LLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH-SKNFIHRDVK 130
Query: 157 LSSVVVTQTLDWKL---HAFDVLSEFDGNNEAANGPMLQYAWLVG-AQYKPVELAKSDWT 212
+ ++ L F + ++ + P + L G A+Y +
Sbjct: 131 PDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLG--- 187
Query: 213 AVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTA----------------SIPKSL 256
D LG ++ G + + + K
Sbjct: 188 ---IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGY 244
Query: 257 LPDYQRLLSSM----PSRRLNSSKLIENSVGDFWMTEYFQN 293
++ L+ + + S L + + + + F
Sbjct: 245 PSEFATYLNFCRSLRFDDKPDYSYLRQ-LFRNLFHRQGFSY 284
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.8 bits (123), Expect = 1e-07
Identities = 36/277 (12%), Positives = 83/277 (29%), Gaps = 48/277 (17%)
Query: 32 GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91
+ + V++ + + +H NI +
Sbjct: 32 AEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNI--------IN 83
Query: 92 NIDATSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLN-------------Q 136
+ A + +Y++ E L E ++ G + + Q
Sbjct: 84 LLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQ 143
Query: 137 IAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWL 196
+A+ + +L K +H ++ +V+VT+ K+ F + + +
Sbjct: 144 VARGMEYLA-SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN----GR 198
Query: 197 VGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL----SKTEELR----- 247
+ ++ E + D W G L++E+F+ EEL
Sbjct: 199 LPVKWMAPEALFD------RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 252
Query: 248 -NTASIPKSLLPDYQRLLSSM----PSRRLNSSKLIE 279
+ P + + ++ PS+R +L+E
Sbjct: 253 GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 289
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.7 bits (118), Expect = 5e-07
Identities = 36/253 (14%), Positives = 75/253 (29%), Gaps = 41/253 (16%)
Query: 44 DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103
V+I I + + K + + H ++ + + I+
Sbjct: 27 GQYDVAIKMIKEGSMSEDEF---IEEAKVMMNLSHEKLVQL--------YGVCTKQRPIF 75
Query: 104 IVTEPVMPLSEKIKELGLEGSQRDEYYAWGL-NQIAKAVSFLNNDCKLVHGNVCLSSVVV 162
I+TE M + L + + + +A+ +L + +H ++ + +V
Sbjct: 76 IITEY-MANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRDLAARNCLV 133
Query: 163 TQTLDWKLHAFDVLSEF-DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWS 221
K+ F + D ++ G W P L S +++
Sbjct: 134 NDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWS-----PPEVLMYSKFSS-------K 181
Query: 222 IDSWGLGCLIYEL-------FSGMRLSKTEEL---RNTASIPKSLLPDYQRLLSSM---- 267
D W G L++E+ + S+T E P ++ S
Sbjct: 182 SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEK 241
Query: 268 PSRRLNSSKLIEN 280
R L+ N
Sbjct: 242 ADERPTFKILLSN 254
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.8 bits (118), Expect = 5e-07
Identities = 35/255 (13%), Positives = 79/255 (30%), Gaps = 36/255 (14%)
Query: 40 TSKDDGSPVSI--FSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97
+ D G ++ + + R + L +R L LH
Sbjct: 47 SGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE----- 101
Query: 98 TKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCL 157
TK+ + + L + + + + +I A+ L+ +++ ++ L
Sbjct: 102 TKLHLILDYINGGELFTHLSQ---RERFTEHEVQIYVGEIVLALEHLH-KLGIIYRDIKL 157
Query: 158 SSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKS 217
++++ L F + EF + + +A
Sbjct: 158 ENILLDSNGHVVLTDFGLSKEFVAD---------ETERAYDFCGTIEYMAPDIVRGGDSG 208
Query: 218 PPWSIDSWGLGCLIYELFSGMRLSKTEELRNTAS------------IPKSLLPDYQRLLS 265
++D W LG L+YEL +G + +N+ + P+ + + L+
Sbjct: 209 HDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQ 268
Query: 266 SM----PSRRLNSSK 276
+ P +RL
Sbjct: 269 RLLMKDPKKRLGCGP 283
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 49.8 bits (118), Expect = 6e-07
Identities = 35/259 (13%), Positives = 73/259 (28%), Gaps = 32/259 (12%)
Query: 37 FQGTSKDDGSPVSIFSIS--GTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94
G K G +I + + + + HPN++
Sbjct: 43 CSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKST-- 100
Query: 95 ATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154
+ I+TE + S +G L IA + +L + VH +
Sbjct: 101 ------PVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN-YVHRD 153
Query: 155 VCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAV 214
+ +++V L K+ F + + + P+ +
Sbjct: 154 LAARNILVNSNLVCKVSDFGLSRFLEDDTS------DPTYTSALGGKIPIRWTAPEAIQY 207
Query: 215 RKSPPWSIDSWGLGCLIYELFSGMRL----SKTEELRN------TASIPKSLLPDYQRLL 264
RK S D W G +++E+ S +++ N P +L+
Sbjct: 208 RKFTSAS-DVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLM 266
Query: 265 SSM----PSRRLNSSKLIE 279
+ R +++
Sbjct: 267 LDCWQKDRNHRPKFGQIVN 285
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.0 bits (116), Expect = 9e-07
Identities = 28/237 (11%), Positives = 75/237 (31%), Gaps = 34/237 (14%)
Query: 58 AQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIK 117
+Q + V + ++ H N++ + +VTE S +
Sbjct: 50 SQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPM---------KMVTELAPLGSLLDR 100
Query: 118 ELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177
+G + Q+A+ + +L + +H ++ ++++ K+ F ++
Sbjct: 101 LRKHQGHFLLGTLSRYAVQVAEGMGYLESKR-FIHRDLAARNLLLATRDLVKIGDFGLMR 159
Query: 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
N++ + + + ++ + D+W G ++E+F+
Sbjct: 160 ALPQNDD----HYVMQEHRKVPFAWC-----APESLKTRTFSHASDTWMFGVTLWEMFTY 210
Query: 238 MR-----------LSKTEELRNTASIPKSLLPDYQRLLSSM----PSRRLNSSKLIE 279
+ L K ++ P+ D ++ P R L +
Sbjct: 211 GQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD 267
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.2 bits (114), Expect = 1e-06
Identities = 41/248 (16%), Positives = 77/248 (31%), Gaps = 54/248 (21%)
Query: 67 RNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIKELGLEGSQR 126
+ ++ +RH ++ E I YIVTE + S G G
Sbjct: 60 LQEAQVMKKLRHEKLVQLYAVVSEEPI---------YIVTEYMSKGSLLDFLKGETGKYL 110
Query: 127 DEYYAWGL-NQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNN-- 183
+ QIA ++++ VH ++ ++++V + L K+ F + + N
Sbjct: 111 RLPQLVDMAAQIASGMAYVER-MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 169
Query: 184 --EAANGPMLQYA--WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMR 239
+ A P+ A + ++ KSD W G L+ EL + R
Sbjct: 170 ARQGAKFPIKWTAPEAALYGRFTI----KSDV-------------WSFGILLTELTTKGR 212
Query: 240 LSKTEELRNTA----------SIPKSLLPDYQRLLSSM----PSRRLNSSKLIENSVGDF 285
+ + P L+ P R L
Sbjct: 213 VPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA------ 266
Query: 286 WMTEYFQN 293
++ +YF +
Sbjct: 267 FLEDYFTS 274
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.3 bits (114), Expect = 2e-06
Identities = 32/261 (12%), Positives = 78/261 (29%), Gaps = 43/261 (16%)
Query: 42 KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKIT 101
+ + V+I +++ + N ++ +++ L
Sbjct: 47 DEPETRVAIKTVNEAASMR-ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ--------P 97
Query: 102 IYIVTEPVM---------PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVH 152
++ E + L + + +IA +++LN K VH
Sbjct: 98 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA-NKFVH 156
Query: 153 GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWT 212
++ + +V + K+ F + + + G L+ ++ E K
Sbjct: 157 RDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG----GKGLLPVRWMSPESLKDG-- 210
Query: 213 AVRKSPPWSIDSWGLGCLIYELFSGMR-----LSKTEELR-----NTASIPKSLLPDYQR 262
+ + W G +++E+ + LS + LR P +
Sbjct: 211 --VFTTYSDV--WSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFE 266
Query: 263 LLSSM----PSRRLNSSKLIE 279
L+ P R + ++I
Sbjct: 267 LMRMCWQYNPKMRPSFLEIIS 287
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.8 bits (113), Expect = 2e-06
Identities = 32/251 (12%), Positives = 81/251 (32%), Gaps = 39/251 (15%)
Query: 44 DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103
+ V+I +I + + + + HP ++ + I
Sbjct: 28 NKDKVAIKTIREGAMSEEDF---IEEAEVMMKLSHPKLVQL--------YGVCLEQAPIC 76
Query: 104 IVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT 163
+V E + G E + + +++L C ++H ++ + +V
Sbjct: 77 LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVG 135
Query: 164 QTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVG-AQYKPVELAKSDWTAVRKSPPWSI 222
+ K+ S+F + ++ E+ + +
Sbjct: 136 ENQVIKV------SDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK------S 183
Query: 223 DSWGLGCLIYELFSGMRL-----SKTEELRNTAS-----IPKSLLPDYQRLLSSM----P 268
D W G L++E+FS ++ S +E + + ++ P+ ++++ P
Sbjct: 184 DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERP 243
Query: 269 SRRLNSSKLIE 279
R S+L+
Sbjct: 244 EDRPAFSRLLR 254
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.2 bits (114), Expect = 2e-06
Identities = 33/257 (12%), Positives = 75/257 (29%), Gaps = 42/257 (16%)
Query: 41 SKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKI 100
+ V+I + + + + + +P I+ + + E
Sbjct: 32 MRKKQIDVAIKVLK-QGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA-------- 82
Query: 101 TIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWG-LNQIAKAVSFLNNDCKLVHGNVCLSS 159
+ +V E + K L + + L+Q++ + +L VH ++ +
Sbjct: 83 -LMLVME-MAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE-KNFVHRDLAARN 139
Query: 160 VVVTQTLDWKLHAF---DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRK 216
V++ K+ F L D A + W Y P + +++
Sbjct: 140 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKW-----YAPECINFRKFSS--- 191
Query: 217 SPPWSIDSWGLGCLIYEL-------FSGMRLSKTEEL---RNTASIPKSLLPDYQRLLSS 266
D W G ++E + M+ + P P+ L+S
Sbjct: 192 ----RSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSD 247
Query: 267 M----PSRRLNSSKLIE 279
R + + +
Sbjct: 248 CWIYKWEDRPDFLTVEQ 264
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.9 bits (113), Expect = 2e-06
Identities = 40/267 (14%), Positives = 82/267 (30%), Gaps = 39/267 (14%)
Query: 37 FQGTSKDDGS--PVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENI 93
+ K DG +I + ++D H ++ L + HPNI+ L + E
Sbjct: 27 LKARIKKDGLRMDAAIKRMKEYASKDDH-RDFAGELEVLCKLGHHPNIINLLGACEHRGY 85
Query: 94 D------ATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGL-NQIAKAVSFLNN 146
A + ++ V+ S +A+ + +L+
Sbjct: 86 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ 145
Query: 147 DCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVEL 206
+ +H ++ +++V + K+ F LS L W L
Sbjct: 146 -KQFIHRDLAARNILVGENYVAKIADFG-LSRGQEVYVKKTMGRLPVRW-----MAIESL 198
Query: 207 AKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL-----SKTEELRNTAS-----IPKSL 256
S +T + D W G L++E+ S + E P +
Sbjct: 199 NYSVYTT-------NSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNC 251
Query: 257 LPDYQRLLSSM----PSRRLNSSKLIE 279
+ L+ P R + ++++
Sbjct: 252 DDEVYDLMRQCWREKPYERPSFAQILV 278
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.9 bits (113), Expect = 3e-06
Identities = 38/263 (14%), Positives = 84/263 (31%), Gaps = 43/263 (16%)
Query: 37 FQGTSKDDGS----PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92
++G +G PV+I + + + + + +V +P++ L
Sbjct: 26 YKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVDNPHVCRLLGICLTST 84
Query: 93 IDATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVH 152
+ ++T+ + + + +Y QIAK +++L + +LVH
Sbjct: 85 ---------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED-RRLVH 134
Query: 153 GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEA--ANGPMLQYAWLVGAQYKPVELAKSD 210
++ +V+V K+ F + + A G + W+ +E
Sbjct: 135 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM------ALESIL-- 186
Query: 211 WTAVRKSPPWSIDSWGLGCLIYEL-------FSGMRLSKTEEL---RNTASIPKSLLPDY 260
+ D W G ++EL + G+ S+ + P D
Sbjct: 187 ----HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDV 242
Query: 261 QRLLSSM----PSRRLNSSKLIE 279
++ R +LI
Sbjct: 243 YMIMVKCWMIDADSRPKFRELII 265
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.5 bits (112), Expect = 3e-06
Identities = 37/260 (14%), Positives = 79/260 (30%), Gaps = 48/260 (18%)
Query: 40 TSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99
+ ++ V+I + D +R HP+I+ + T+
Sbjct: 30 SPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI---------TE 79
Query: 100 ITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSS 159
++I+ E + + S Q++ A+++L + VH ++ +
Sbjct: 80 NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL-ESKRFVHRDIAARN 138
Query: 160 VVVTQTLDWKLHAFDVLSEFDGNNEAAN----GPMLQYAW--LVGAQYKPVELAKSDWTA 213
V+V+ KL F + + + P+ A + ++ SD
Sbjct: 139 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS----ASDV-- 192
Query: 214 VRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTA----------SIPKSLLPDYQRL 263
W G ++E+ N +P + P L
Sbjct: 193 -----------WMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSL 241
Query: 264 LSSM----PSRRLNSSKLIE 279
++ PSRR ++L
Sbjct: 242 MTKCWAYDPSRRPRFTELKA 261
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 47.5 bits (112), Expect = 3e-06
Identities = 25/207 (12%), Positives = 59/207 (28%), Gaps = 25/207 (12%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
F+GT+ + V+I + R+ + + + + ++
Sbjct: 22 FEGTNLLNNQQVAIKFEP----RRSDAPQLRDEYRTYKLLAGCTGIPNVY-------YFG 70
Query: 97 STKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVH---- 152
+ +V + + P E + +L Q+ V ++ + LV+
Sbjct: 71 QEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMA-AKQMLARVQSIH-EKSLVYRDIK 128
Query: 153 -GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVG-AQYKPVELAKSD 210
N + + F ++ + + P + L G A+Y +
Sbjct: 129 PDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHL-- 186
Query: 211 WTAVRKSPPWSIDSWGLGCLIYELFSG 237
+ D LG + G
Sbjct: 187 ----GREQSRRDDLEALGHVFMYFLRG 209
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 46.4 bits (109), Expect = 7e-06
Identities = 34/281 (12%), Positives = 84/281 (29%), Gaps = 57/281 (20%)
Query: 36 HFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95
+ + V++ + A A + + +PNI+ L V
Sbjct: 34 APGLLPYEPFTMVAVKMLK-EEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK--- 89
Query: 96 TSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYYAWGLN------------------ 135
+ ++ E L+E ++ + +
Sbjct: 90 -----PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLC 144
Query: 136 ---QIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQ 192
Q+A +++L+ K VH ++ + +V + + K+ F + +
Sbjct: 145 IARQVAAGMAYLSE-RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY----KAD 199
Query: 193 YAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMR-----LSKTEELR 247
+ ++ P E + D W G +++E+FS ++ E +
Sbjct: 200 GNDAIPIRWMPPESIFYNRYTTE------SDVWAYGVVLWEIFSYGLQPYYGMAHEEVIY 253
Query: 248 -----NTASIPKSLLPDYQRLLSSM----PSRRLNSSKLIE 279
N + P++ + L+ P+ R + +
Sbjct: 254 YVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHR 294
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.5 bits (109), Expect = 7e-06
Identities = 46/324 (14%), Positives = 101/324 (31%), Gaps = 46/324 (14%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96
V+I +S H A + ++ V H NI++ L+ +
Sbjct: 34 CAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 93
Query: 97 STKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156
+ + VM L + ++ E ++ L Q+ + L++ +H ++
Sbjct: 94 FQDVYL------VMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI-IHRDLK 146
Query: 157 LSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYK--PVELAKSDWTAV 214
S++VV K+ F + + V +Y P + +
Sbjct: 147 PSNIVVKSDCTLKILDFGLARTAGTSF--------MMTPYVVTRYYRAPEVILGMGYK-- 196
Query: 215 RKSPPWSIDSWGLGCLIYELFSGMRL----SKTEELRN--------TASIPKSLLPDYQR 262
++D W +GC++ E+ L ++ K L P +
Sbjct: 197 -----ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 251
Query: 263 LLSSMPSRRLNSSKLIENSVGDFWMTEYFQNKLVDTIHFMEILNLKDSVE--------KD 314
+ + P + + +E+ + K + + + D + +
Sbjct: 252 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 311
Query: 315 TFFRKLPNLAE--QLPRQIVLKKL 336
+ + AE P QI K+L
Sbjct: 312 PYINVWYDPAEVEAPPPQIYDKQL 335
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.2 bits (106), Expect = 1e-05
Identities = 33/256 (12%), Positives = 74/256 (28%), Gaps = 33/256 (12%)
Query: 38 QGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97
+ +S PV+I ++ + + H NI + S
Sbjct: 29 KTSSGKKEVPVAIKTLK-AGYTEKQRVDFLGEAGIMGQFSHHNI--------IRLEGVIS 79
Query: 98 TKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCL 157
+ I+TE + + +G L IA + + + VH ++
Sbjct: 80 KYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKY-LANMNYVHRDLAA 138
Query: 158 SSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKS 217
+++V L K+ + LS ++ A + + E +
Sbjct: 139 RNILVNSNLVCKV-SDFGLSRVLEDDPEATYTTSGGKIPIR--WTAPEAISY------RK 189
Query: 218 PPWSIDSWGLGCLIYELFSGMRLSKTEELRNTA----------SIPKSLLPDYQRLLSSM 267
+ D W G +++E+ + E + P +L+
Sbjct: 190 FTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQC 249
Query: 268 ----PSRRLNSSKLIE 279
+RR + ++
Sbjct: 250 WQQERARRPKFADIVS 265
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.2 bits (106), Expect = 2e-05
Identities = 33/236 (13%), Positives = 68/236 (28%), Gaps = 30/236 (12%)
Query: 58 AQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPVMPLSEKIK 117
G ++ ++ HPN+L+ L ++ + +V M +
Sbjct: 67 TDIGEVSQFLTEGIIMKDFSHPNVLSLLGI-------CLRSEGSPLVVLPY-MKHGDLRN 118
Query: 118 ELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177
+ E G K VH ++ + ++ + K+ A L+
Sbjct: 119 FIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKV-ADFGLA 177
Query: 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG 237
+ E + A L L +T D W G L++EL +
Sbjct: 178 RDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT-------KSDVWSFGVLLWELMTR 230
Query: 238 MR-----LSKTEELRNTASIPKSLLPDY---------QRLLSSMPSRRLNSSKLIE 279
++ + + L P+Y + R + S+L+
Sbjct: 231 GAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 286
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 45.2 bits (106), Expect = 2e-05
Identities = 34/253 (13%), Positives = 78/253 (30%), Gaps = 42/253 (16%)
Query: 37 FQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95
K+ G+ ++ + + N + L+ V P ++
Sbjct: 58 MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF------SFK 111
Query: 96 TSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNV 155
++ + + + + ++ +G +YA QI +L+ L++ ++
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA---QIVLTFEYLH-SLDLIYRDL 167
Query: 156 CLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPM--LQYAWLVGAQYKPVELAKSDWTA 213
++++ Q ++ F G G L ++ Y DW
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNK----AVDW-- 221
Query: 214 VRKSPPWSIDSWGLGCLIYELFSG------------MRLSKTEELRNTASIPKSLLPDYQ 261
W LG LIYE+ +G + ++R + L +
Sbjct: 222 -----------WALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 270
Query: 262 RLLSSMPSRRLNS 274
LL ++R +
Sbjct: 271 NLLQVDLTKRFGN 283
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.4 bits (104), Expect = 4e-05
Identities = 37/282 (13%), Positives = 85/282 (30%), Gaps = 58/282 (20%)
Query: 36 HFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENID 94
+ + V++ + A A + +K + + H NI+ L + +
Sbjct: 58 AYGISKTGVSIQVAVKMLK-EKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG-- 114
Query: 95 ATSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWG------------------- 133
IY++ E L ++ + S+ + Y
Sbjct: 115 ------PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLC 168
Query: 134 -LNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQ 192
Q+AK + FL VH ++ +V+VT K+ F + + ++ +++
Sbjct: 169 FAYQVAKGMEFL-EFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY----VVR 223
Query: 193 YAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMR-----LSKTEELR 247
+ ++ E + + S+ G L++E+FS +
Sbjct: 224 GNARLPVKWMAPESLFEGIY----TIKSDVWSY--GILLWEIFSLGVNPYPGIPVDANFY 277
Query: 248 N------TASIPKSLLPDYQRLLSSM----PSRRLNSSKLIE 279
P + ++ S +R + L
Sbjct: 278 KLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTS 319
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.0 bits (103), Expect = 4e-05
Identities = 36/279 (12%), Positives = 83/279 (29%), Gaps = 57/279 (20%)
Query: 36 HFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENID 94
+ D V++ + +A A + +K L + H NI+ L + +
Sbjct: 44 AYGLIKSDAAMTVAVKMLK-PSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG-- 100
Query: 95 ATSTKITIYIVTE--PVMPLSEKIKELGLEGSQRDEYYAWGLN---------------QI 137
++TE L ++ A + Q+
Sbjct: 101 ------PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQV 154
Query: 138 AKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL--HAFDVLSEFDGNNEAANGPMLQYAW 195
AK ++FL + +H ++ ++++T K+ + D N L W
Sbjct: 155 AKGMAFLAS-KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKW 213
Query: 196 LVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTA----- 250
+ + + + D W G ++ELFS ++
Sbjct: 214 M------------APESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 261
Query: 251 ------SIPKSLLPDYQRLLSSM----PSRRLNSSKLIE 279
P+ + ++ + P +R ++++
Sbjct: 262 KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 778 | |||
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 99.97 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.68 | |
| d1b3ua_ | 588 | Constant regulatory domain of protein phosphatase | 99.2 | |
| d1b3ua_ | 588 | Constant regulatory domain of protein phosphatase | 99.18 | |
| d1ibrb_ | 458 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 98.07 | |
| d2vglb_ | 579 | Adaptin beta subunit N-terminal fragment {Human (H | 97.77 | |
| d2vglb_ | 579 | Adaptin beta subunit N-terminal fragment {Human (H | 97.69 | |
| d1q1sc_ | 434 | Importin alpha {Mouse (Mus musculus) [TaxId: 10090 | 97.6 | |
| d1ibrb_ | 458 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 97.56 | |
| d1u6gc_ | 1207 | Cullin-associated NEDD8-dissociated protein 1 (Tip | 97.39 | |
| d1oyza_ | 276 | Hypothetical protein YibA {Escherichia coli [TaxId | 97.34 | |
| d1q1sc_ | 434 | Importin alpha {Mouse (Mus musculus) [TaxId: 10090 | 97.11 | |
| d1te4a_ | 111 | MTH187 {Archaeon Methanobacterium thermoautotrophi | 97.09 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 97.06 | |
| d1u6gc_ | 1207 | Cullin-associated NEDD8-dissociated protein 1 (Tip | 96.97 | |
| d1qgra_ | 876 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 96.95 | |
| d1qbkb_ | 888 | Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 | 96.77 | |
| d1wa5b_ | 503 | Karyopherin alpha {Baker's yeast (Saccharomyces ce | 96.66 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 96.62 | |
| d1wa5b_ | 503 | Karyopherin alpha {Baker's yeast (Saccharomyces ce | 96.44 | |
| d1xqra1 | 264 | Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi | 96.42 | |
| d1qgra_ | 876 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 96.24 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 96.24 | |
| d2vgla_ | 584 | Adaptin alpha C subunit N-terminal fragment {Mouse | 96.09 | |
| d2bpta1 | 861 | Importin beta {Baker's yeast (Saccharomyces cerevi | 96.09 | |
| d1te4a_ | 111 | MTH187 {Archaeon Methanobacterium thermoautotrophi | 95.84 | |
| d1qbkb_ | 888 | Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 | 95.62 | |
| d1xqra1 | 264 | Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi | 95.32 | |
| d1oyza_ | 276 | Hypothetical protein YibA {Escherichia coli [TaxId | 95.31 | |
| d2vgla_ | 584 | Adaptin alpha C subunit N-terminal fragment {Mouse | 95.09 | |
| d2bpta1 | 861 | Importin beta {Baker's yeast (Saccharomyces cerevi | 94.76 | |
| d1xm9a1 | 457 | Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} | 94.56 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 94.06 | |
| d1lrva_ | 233 | Leucine-rich repeat variant {Azotobacter vinelandi | 93.51 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 93.44 | |
| d1jdha_ | 529 | beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | 93.39 | |
| d1jdha_ | 529 | beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | 92.38 | |
| d1xm9a1 | 457 | Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} | 88.37 | |
| d1lrva_ | 233 | Leucine-rich repeat variant {Azotobacter vinelandi | 84.52 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 83.17 |
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-43 Score=374.92 Aligned_cols=248 Identities=17% Similarity=0.245 Sum_probs=203.3
Q ss_pred hhhhhccccCCCCCCCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCC
Q 004025 2 FKFLKGVVGGSGAGVKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPN 80 (778)
Q Consensus 2 ~~~lk~~~~~s~~~~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPn 80 (778)
++.|++.+. .++ +..+|++.++||.|+ | +||+|+++.+|+.||||++...... ..+.+.+|+++|++++|||
T Consensus 6 ~~~l~~~~~-~~d--p~~~Y~~~~~iG~G~fg--~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~Hpn 78 (293)
T d1yhwa1 6 LEKLRSIVS-VGD--PKKKYTRFEKIGQGASG--TVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKNPN 78 (293)
T ss_dssp HHHHHHHSB-SSC--TTTTBCSCEECCCSSSC--EEEEEEBTTTCCEEEEEEEEGGGCS--CHHHHHHHHHHHHHCCCTT
T ss_pred HHHHhccCC-CCC--cccccEEEEEEecCcCc--EEEEEEECCCCCEEEEEEEecccCh--HHHHHHHHHHHHHhCCCCC
Confidence 345666663 222 456799999999999 9 9999999999999999999865333 3467899999999999999
Q ss_pred eeeEeeeeEecccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCC
Q 004025 81 ILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLS 158 (778)
Q Consensus 81 Ilk~~d~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~ 158 (778)
|++++++++++ .++||||||| ++|.+++.+... ....++.++.||+.||.|||+ .+|+||||||+
T Consensus 79 Iv~~~~~~~~~--------~~~~ivmEy~~gg~L~~~~~~~~l----~~~~~~~i~~qi~~aL~yLH~-~~iiHrDiKp~ 145 (293)
T d1yhwa1 79 IVNYLDSYLVG--------DELWVVMEYLAGGSLTDVVTETCM----DEGQIAAVCRECLQALEFLHS-NQVIHRDIKSD 145 (293)
T ss_dssp BCCEEEEEEET--------TEEEEEEECCTTCBHHHHHHHSCC----CHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGG
T ss_pred EeeEeEEEEEC--------CEEEEEEEecCCCcHHHHhhccCC----CHHHHHHHHHHHHHHHHHHHH-CCCcccCCcHH
Confidence 99999999874 3899999999 579888776543 344566779999999999996 89999999999
Q ss_pred CeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCC
Q 004025 159 SVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM 238 (778)
Q Consensus 159 NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~ 238 (778)
||+++.+|.+||+|||+++.+..... ......++..|+|||++.+ ..++.++|||||||++|+|++|.
T Consensus 146 NILl~~~~~vkl~DFG~a~~~~~~~~------~~~~~~gt~~Y~aPE~~~~------~~~~~~~DiwSlGvilyemltG~ 213 (293)
T d1yhwa1 146 NILLGMDGSVKLTDFGFCAQITPEQS------KRSTMVGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMIEGE 213 (293)
T ss_dssp GEEECTTCCEEECCCTTCEECCSTTC------CBCCCCSCGGGCCHHHHSS------SCBCTHHHHHHHHHHHHHHHHSS
T ss_pred HeEECCCCcEeeccchhheeeccccc------cccccccCCCccChhhhcC------CCCCchhceehHhHHHHHHhhCC
Confidence 99999999999999999988754321 1122345668999999987 35778999999999999999999
Q ss_pred CCCChhh----hh-----------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 239 RLSKTEE----LR-----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 239 ~p~~~~~----l~-----------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+||.... +. ....++..+.+++.+||..||.+|||+.++++|+
T Consensus 214 ~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~Hp 271 (293)
T d1yhwa1 214 PPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQ 271 (293)
T ss_dssp CTTTTSCHHHHHHHHHHHCSCCCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTCG
T ss_pred CCCCCCCHHHHHHHHHhCCCCCCCCcccCCHHHHHHHHHHccCChhHCcCHHHHhcCH
Confidence 9985421 10 1134667789999999999999999999999998
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-43 Score=371.04 Aligned_cols=243 Identities=19% Similarity=0.224 Sum_probs=190.2
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.||.|+ | +||+|+++.+|+.||||++......+...+.+.+|+++|++|+||||+++++++.++.
T Consensus 4 edy~~~~~iG~G~fg--~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~----- 76 (269)
T d2java1 4 EDYEVLYTIGTGSYG--RCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRT----- 76 (269)
T ss_dssp GGEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC-------
T ss_pred hhCEEeEEEecCCCe--EEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCC-----
Confidence 4699999999998 8 9999999999999999999887666666778999999999999999999999987543
Q ss_pred cccEEEEEecCC--cChHHHHHHhCc-CCCcchHHHHHHHHHHHHHHHHHHcCC----CccccccCCCCeEEcCCCcEEE
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDC----KLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~----~ivH~dLkp~NI~v~~~g~~KL 170 (778)
...+||||||| ++|.+++..... .....+..+..++.||+.||.|||+.. +|+||||||+|||++.+|.+||
T Consensus 77 -~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl 155 (269)
T d2java1 77 -NTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKL 155 (269)
T ss_dssp ---CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEE
T ss_pred -CCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEE
Confidence 34799999999 589999875432 222334556677999999999999622 4999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh---
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--- 247 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~--- 247 (778)
+|||+++.+..... ......+++.|+|||++.+ ..++.++|||||||++|||++|.+||......
T Consensus 156 ~DFG~a~~~~~~~~------~~~~~~gt~~Y~APE~l~~------~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~ 223 (269)
T d2java1 156 GDFGLARILNHDTS------FAKAFVGTPYYMSPEQMNR------MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELA 223 (269)
T ss_dssp CCHHHHHHC-----------------CCCSCCCHHHHTT------CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred eeccceeecccCCC------ccccCCCCcccCCHHHHcC------CCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHH
Confidence 99999988754321 1122345678999999876 36788999999999999999999998643211
Q ss_pred ------cc----CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ------NT----ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ------~~----~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. ..+|+.+.+++.+||..||.+|||+.++++||
T Consensus 224 ~~i~~~~~~~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp 267 (269)
T d2java1 224 GKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENP 267 (269)
T ss_dssp HHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred HHHHcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHHhCC
Confidence 11 34667789999999999999999999999998
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-43 Score=369.96 Aligned_cols=235 Identities=18% Similarity=0.275 Sum_probs=196.9
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
.+|++++.||.|+ | +||+|+++.+|+.||||++.+.... ....+.+.+|+++|+.++||||++++++++++
T Consensus 6 ~dy~i~~~iG~G~fg--~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~----- 78 (263)
T d2j4za1 6 EDFEIGRPLGKGKFG--NVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA----- 78 (263)
T ss_dssp GGEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS-----
T ss_pred hHeEEEEEEecCCCc--EEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEEC-----
Confidence 3699999999998 8 9999999999999999999754222 23456788999999999999999999999874
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+||||||| ++|.+++...+.. .+..+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|||
T Consensus 79 ---~~~~ivmEy~~~g~L~~~l~~~~~l---~e~~~~~i~~qi~~al~~lH~-~~ivHrDiKp~Nill~~~~~~kl~DFG 151 (263)
T d2j4za1 79 ---TRVYLILEYAPLGTVYRELQKLSKF---DEQRTATYITELANALSYCHS-KRVIHRDIKPENLLLGSAGELKIADFG 151 (263)
T ss_dssp ---SEEEEEEECCTTCBHHHHHHHHSSC---CHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEECTTSCEEECCCC
T ss_pred ---CEEEEEEeecCCCcHHHHHhhcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeeeeeeccccceecCCCCEeecccc
Confidence 4899999999 5899999876532 344566679999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------ 248 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~------ 248 (778)
++....... .....++..|+|||++.+ ..++.++|||||||++|||++|..||.......
T Consensus 152 ~a~~~~~~~--------~~~~~Gt~~Y~APE~~~~------~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~ 217 (263)
T d2j4za1 152 WSVHAPSSR--------RTTLCGTLDYLPPEMIEG------RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 217 (263)
T ss_dssp SCSCCCCCC--------CEETTEEGGGCCHHHHTT------CCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH
T ss_pred eeeecCCCc--------ccccCCCCcccCHHHHcC------CCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence 997765421 112345669999999987 467889999999999999999999986532211
Q ss_pred ------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+|+.+.+++.+||..||.+|||+.++++|+
T Consensus 218 ~~~~~~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~hp 256 (263)
T d2j4za1 218 RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP 256 (263)
T ss_dssp TTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTCH
T ss_pred cCCCCCCccCCHHHHHHHHHHccCCHhHCcCHHHHHcCc
Confidence 124667788999999999999999999999998
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.5e-44 Score=375.35 Aligned_cols=239 Identities=15% Similarity=0.170 Sum_probs=193.1
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.||+|+ | +||+|+++.+|+.||||++.++...+ ..+.+++|+++|++|+||||++++++++++
T Consensus 5 ~dy~~~~~lG~G~fg--~V~~~~~~~~~~~vAiK~i~~~~~~~-~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~------ 75 (271)
T d1nvra_ 5 EDWDLVQTLGEGAYG--EVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENVVKFYGHRREG------ 75 (271)
T ss_dssp TEEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHTCCCTTBCCEEEEEEET------
T ss_pred cceEEEEEEecCcCe--EEEEEEECCCCCEEEEEEEehhhcch-HHHHHHHHHHHHHhCCCCCEeeEeeeeccC------
Confidence 4699999999998 8 99999999999999999998754332 345688999999999999999999999874
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+||||||| ++|.++|..... ..+..+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|||+
T Consensus 76 --~~~~ivmEy~~gg~L~~~l~~~~~---l~e~~~~~i~~qi~~al~ylH~-~~IiHrDiKp~NILl~~~~~~KL~DFG~ 149 (271)
T d1nvra_ 76 --NIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMAGVVYLHG-IGITHRDIKPENLLLDERDNLKISDFGL 149 (271)
T ss_dssp --TEEEEEEECCTTEEGGGGSBTTTB---CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred --ceeEEEEeccCCCcHHHHHhcCCC---CCHHHHHHHHHHHHHHHHHHHH-cCCccCcccHHHEEECCCCCEEEccchh
Confidence 4899999999 479988865432 2344566779999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh--------h
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------R 247 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l--------~ 247 (778)
++.+....... ......++..|+|||++.+. ..++.++|||||||++|||++|.+||..... .
T Consensus 150 a~~~~~~~~~~----~~~~~~GT~~Y~APE~~~~~-----~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~ 220 (271)
T d1nvra_ 150 ATVFRYNNRER----LLNKMCGTLPYVAPELLKRR-----EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 220 (271)
T ss_dssp CEECEETTEEC----CBCCCCSCGGGSCTHHHHCS-----SBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHH
T ss_pred heeeccCCccc----cccceeeCcCccCHhHhcCC-----CCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHh
Confidence 98775432111 11223456699999998763 2345789999999999999999999853211 0
Q ss_pred -------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....++..+.+++.+||+.||.+|||+.++++|+
T Consensus 221 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hp 261 (271)
T d1nvra_ 221 EKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDR 261 (271)
T ss_dssp TTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCT
T ss_pred cCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCH
Confidence 0135677888999999999999999999999998
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.8e-43 Score=377.13 Aligned_cols=238 Identities=16% Similarity=0.181 Sum_probs=197.2
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
+...+|++.++||.|+ | +||+|+++.+|+.||||++.+... ......+.+|+++|++|+||||++++++++++
T Consensus 3 l~~d~y~~~~~iG~G~fg--~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--- 76 (322)
T d1s9ja_ 3 LKDDDFEKISELGAGNGG--VVFKVSHKPSGLVMARKLIHLEIK-PAIRNQIIRELQVLHECNSPYIVGFYGAFYSD--- 76 (322)
T ss_dssp CCGGGEEEEEEEECCSSC--CEEEEEETTTTEEEEEEEEECCCC-TTHHHHHHHHGGGGGGCCCTTBCCEEEEEECS---
T ss_pred CCccCCEEEEEEecCCCe--EEEEEEECCCCcEEEEEEEChhhC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC---
Confidence 4567899999999999 9 899999999999999999986533 34456789999999999999999999999874
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
.++||||||| ++|.+++.+.+. .....++.++.||+.||.|||+.++|+||||||+||+++.+|.+||+|
T Consensus 77 -----~~~~iVmEy~~gg~L~~~l~~~~~---l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~D 148 (322)
T d1s9ja_ 77 -----GEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCD 148 (322)
T ss_dssp -----SEEEEEEECCTTEEHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECC
T ss_pred -----CEEEEEEEcCCCCcHHHHHhhcCC---CCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEee
Confidence 4899999999 479999987653 234556777999999999999645899999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN---- 248 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~---- 248 (778)
||++..+.... .....++..|+|||++.+ ..++.++|||||||++|||++|+.||.......
T Consensus 149 FGla~~~~~~~--------~~~~~GT~~Y~APEvl~~------~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~ 214 (322)
T d1s9ja_ 149 FGVSGQLIDSM--------ANSFVGTRSYMSPERLQG------THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM 214 (322)
T ss_dssp CCCCHHHHHHT--------C---CCSSCCCCHHHHHC------SCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHH
T ss_pred CCCccccCCCc--------cccccCCccccCchHHcC------CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence 99998764321 123456779999999987 468889999999999999999998884321000
Q ss_pred -----------------------------------------------c-----CCCCcchHHHHHHHhccCCCCCCChHH
Q 004025 249 -----------------------------------------------T-----ASIPKSLLPDYQRLLSSMPSRRLNSSK 276 (778)
Q Consensus 249 -----------------------------------------------~-----~~iP~~L~~~i~~lL~~dP~~Rps~~~ 276 (778)
. ..++..+.+++.+||..||.+|||+++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e 294 (322)
T d1s9ja_ 215 FGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQ 294 (322)
T ss_dssp C------------------------------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred HHHHhcCCcccCCcccccccccccccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHH
Confidence 0 012345788999999999999999999
Q ss_pred HHhcc
Q 004025 277 LIENS 281 (778)
Q Consensus 277 lL~~~ 281 (778)
+|+|+
T Consensus 295 ~L~Hp 299 (322)
T d1s9ja_ 295 LMVHA 299 (322)
T ss_dssp HHTSH
T ss_pred HhhCH
Confidence 99998
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6e-42 Score=360.56 Aligned_cols=236 Identities=15% Similarity=0.172 Sum_probs=194.3
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCcc
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~~ 99 (778)
|++.++||.|+ | +||+|+++.++..||||++......+...+.+.+|+++|++|+||||++++++++....+ .
T Consensus 11 ~~~~~~iG~G~fg--~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~----~ 84 (270)
T d1t4ha_ 11 LKFDIEIGRGSFK--TVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKG----K 84 (270)
T ss_dssp EEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSS----C
T ss_pred EEeeeEEecCcCc--EEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeecccc----C
Confidence 47888999998 8 999999999999999999987655555677899999999999999999999999864322 3
Q ss_pred cEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCC--ccccccCCCCeEEc-CCCcEEEEecc
Q 004025 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCK--LVHGNVCLSSVVVT-QTLDWKLHAFD 174 (778)
Q Consensus 100 ~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~--ivH~dLkp~NI~v~-~~g~~KL~dFg 174 (778)
..+||||||| ++|.+++.+.... ....+..++.||+.||.|||+ .+ |+||||||+||+++ .+|.+||+|||
T Consensus 85 ~~~~ivmE~~~~g~L~~~l~~~~~~---~~~~~~~~~~qi~~gl~yLH~-~~~~IiHrDiKp~NILl~~~~~~~Kl~DFG 160 (270)
T d1t4ha_ 85 KCIVLVTELMTSGTLKTYLKRFKVM---KIKVLRSWCRQILKGLQFLHT-RTPPIIHRDLKCDNIFITGPTGSVKIGDLG 160 (270)
T ss_dssp EEEEEEEECCCSCBHHHHHHHHSSC---CHHHHHHHHHHHHHHHHHHHT-SSSCCCCSCCCGGGEEESSTTSCEEECCTT
T ss_pred CEEEEEEeCCCCCcHHHHHhccccc---cHHHHHHHHHHHHHHHHHHHH-CCCCEEeCCcChhhceeeCCCCCEEEeecC
Confidence 5899999999 5899999876532 234456669999999999996 66 99999999999997 58999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh----hh-hcc
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----EL-RNT 249 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~----~l-~~~ 249 (778)
+++...... .....+++.|+|||++.+ .++.++|||||||++|||++|..||... .+ +.+
T Consensus 161 la~~~~~~~--------~~~~~GT~~Y~aPE~~~~-------~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i 225 (270)
T d1t4ha_ 161 LATLKRASF--------AKAVIGTPEFMAPEMYEE-------KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRV 225 (270)
T ss_dssp GGGGCCTTS--------BEESCSSCCCCCGGGGGT-------CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHH
T ss_pred cceeccCCc--------cCCcccCccccCHHHhCC-------CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHH
Confidence 998654321 123356779999999865 4678999999999999999999998532 11 111
Q ss_pred ----------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 250 ----------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 250 ----------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
..+++.+.+++.+||..||++|||+.++|+|+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~Hp 267 (270)
T d1t4ha_ 226 TSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHA 267 (270)
T ss_dssp TTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred HcCCCCcccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCCc
Confidence 23566789999999999999999999999998
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.1e-42 Score=364.43 Aligned_cols=241 Identities=15% Similarity=0.186 Sum_probs=195.4
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..|++.+.||.|+ | +||+|+++.+|..||||++.+.... ..+.+.+|+++|++|+||||++++++++++
T Consensus 12 d~Y~i~~~iG~G~fg--~Vy~~~~~~~~~~vAvK~i~~~~~~--~~~~~~~E~~il~~l~HpnIv~l~~~~~~~------ 81 (288)
T d2jfla1 12 DFWEIIGELGDGAFG--KVYKAQNKETSVLAAAKVIDTKSEE--ELEDYMVEIDILASCDHPNIVKLLDAFYYE------ 81 (288)
T ss_dssp GTEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEECSSSG--GGGGTHHHHHHHHHCCCTTBCCEEEEEEET------
T ss_pred cCeEEeEEEeeCCCc--EEEEEEECCCCeEEEEEEECcCCHH--HHHHHHHHHHHHHhCCCCCCCeEEEEEeeC------
Confidence 4599999999998 8 9999999999999999999875332 355688999999999999999999999874
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+||||||| ++|.+++.+... ...+..+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|||+
T Consensus 82 --~~~~lvmEy~~~g~L~~~~~~~~~--~l~e~~~~~i~~qi~~gL~ylH~-~~ivHrDiKp~NIll~~~~~~Kl~DFG~ 156 (288)
T d2jfla1 82 --NNLWILIEFCAGGAVDAVMLELER--PLTESQIQVVCKQTLDALNYLHD-NKIIHRDLKAGNILFTLDGDIKLADFGV 156 (288)
T ss_dssp --TEEEEEEECCTTEEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred --CeEEEEEecCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH-CCEEEeecChhheeECCCCCEEEEechh
Confidence 3899999999 579888776432 12344566779999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh--------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~-------- 247 (778)
+....... .......++..|+|||++..... ....++.++|+|||||++|||++|.+||......
T Consensus 157 a~~~~~~~------~~~~~~~Gt~~y~APE~l~~~~~-~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~ 229 (288)
T d2jfla1 157 SAKNTRTI------QRRDSFIGTPYWMAPEVVMCETS-KDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAK 229 (288)
T ss_dssp CEECHHHH------HHHTCCCSCCTTCCHHHHTTCST-TTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHH
T ss_pred hhccCCCc------ccccccccccccCCHHHHhhccc-CCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHc
Confidence 87654311 01112345668999999864211 1145778999999999999999999998642211
Q ss_pred -------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|..+.+++++||+.||.+|||+.++++|+
T Consensus 230 ~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~hp 270 (288)
T d2jfla1 230 SEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHP 270 (288)
T ss_dssp SCCCCCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTSG
T ss_pred CCCCCCCccccCCHHHHHHHHHHccCChhHCcCHHHHhcCc
Confidence 1134677889999999999999999999999998
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-42 Score=366.95 Aligned_cols=237 Identities=14% Similarity=0.227 Sum_probs=192.0
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
.+|++++.||.|+ | +||+|+++.+|+.||||++.+... .+...+.+.+|+++|++|+||||++++++++++
T Consensus 8 ~dy~i~~~lG~G~fg--~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~----- 80 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFS--TVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDD----- 80 (288)
T ss_dssp GGEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECS-----
T ss_pred CCCEEEEEEeeCCCe--EEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEEC-----
Confidence 3699999999999 9 999999999999999999985422 123456789999999999999999999999874
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+||||||| ++|.+++...+.. .+..+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|||
T Consensus 81 ---~~~~ivmEy~~gg~L~~~~~~~~~l---~e~~~~~~~~qi~~al~ylH~-~~iiHrDiKp~NIll~~~~~vkl~DFG 153 (288)
T d1uu3a_ 81 ---EKLYFGLSYAKNGELLKYIRKIGSF---DETCTRFYTAEIVSALEYLHG-KGIIHRDLKPENILLNEDMHIQITDFG 153 (288)
T ss_dssp ---SEEEEEECCCTTEEHHHHHHHHSSC---CHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECTTSCEEECCCT
T ss_pred ---CEEEEEEEccCCCCHHHhhhccCCC---CHHHHHHHHHHHHHHHHhhcc-ccEEcCcCCccccccCCCceEEecccc
Confidence 4899999999 5799998876542 344466679999999999996 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh-------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------- 247 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------- 247 (778)
+++.+...... .......++..|+|||++.+ ..++.++|||||||++|||++|..||......
T Consensus 154 ~a~~~~~~~~~----~~~~~~~GT~~Y~APE~~~~------~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~ 223 (288)
T d1uu3a_ 154 TAKVLSPESKQ----ARANSFVGTAQYVSPELLTE------KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 223 (288)
T ss_dssp TCEECC--------------CCCCGGGCCHHHHHT------CCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred cceecccCCcc----cccccccCCccccCceeecc------CCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHH
Confidence 99887543211 11122345669999999886 46788999999999999999999998643211
Q ss_pred -cc----CCCCcchHHHHHHHhccCCCCCCChHHHHh
Q 004025 248 -NT----ASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 248 -~~----~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
.. ..+++.+.+++++||..||.+|||++++++
T Consensus 224 ~~~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~ 260 (288)
T d1uu3a_ 224 KLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEG 260 (288)
T ss_dssp TTCCCCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTC
T ss_pred cCCCCCCccCCHHHHHHHHHHccCCHhHCcCHHHHcC
Confidence 11 345667888999999999999999988543
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.4e-41 Score=364.37 Aligned_cols=235 Identities=18% Similarity=0.233 Sum_probs=181.9
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..|++.+.||.|+ | +||+|+++.+|+.||||++.+..... ....+.+|+++|++|+||||++++++++++
T Consensus 9 d~Y~~~~~lG~G~fg--~Vy~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~------ 79 (307)
T d1a06a_ 9 DIYDFRDVLGTGAFS--EVILAEDKRTQKLVAIKCIAKKALEG-KEGSMENEIAVLHKIKHPNIVALDDIYESG------ 79 (307)
T ss_dssp GTEEEEEESBSGGGG--GEEEEEETTTCCEEEEEEEEC-----------CHHHHHHHTCCCTTBCCEEEEEECS------
T ss_pred cceEEEEEEeeccCe--EEEEEEECCCCCEEEEEEEchHHhhh-HHHHHHHHHHHHHhCCCCCCCcEEEEEEEC------
Confidence 3599999999999 8 89999999999999999998754332 345688999999999999999999999874
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEc---CCCcEEEEe
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT---QTLDWKLHA 172 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~---~~g~~KL~d 172 (778)
.++||||||| ++|.++|...+. ..+..+..++.||+.||.|||+ .+++||||||+||++. .+|.+||+|
T Consensus 80 --~~~~lvmE~~~gg~L~~~l~~~~~---l~e~~~~~~~~qi~~al~ylH~-~~iiHrDiKp~Nil~~~~~~~~~vkl~D 153 (307)
T d1a06a_ 80 --GHLYLIMQLVSGGELFDRIVEKGF---YTERDASRLIFQVLDAVKYLHD-LGIVHRDLKPENLLYYSLDEDSKIMISD 153 (307)
T ss_dssp --SEEEEEECCCCSCBHHHHHHTCSC---CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEESSSSTTCCEEECC
T ss_pred --CEEEEEEeccCCCcHHHhhhcccC---CCHHHHHHHHHHHHHHHHhhhh-ceeeeEEecccceeecccCCCceEEEec
Confidence 4899999999 589999976543 2344566779999999999996 8999999999999995 578999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh-----
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----- 247 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~----- 247 (778)
||+++....... .....++..|+|||++.+ ..++.++|+|||||++|||++|.+||......
T Consensus 154 FG~a~~~~~~~~-------~~~~~GT~~y~APE~~~~------~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~ 220 (307)
T d1a06a_ 154 FGLSKMEDPGSV-------LSTACGTPGYVAPEVLAQ------KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQ 220 (307)
T ss_dssp C-------------------------CTTSCHHHHTT------CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred cceeEEccCCCe-------eeeeeeCccccCcHHHcC------CCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 999986654211 122356679999999887 36788999999999999999999998643211
Q ss_pred -----------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -----------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|+.+.+++.+||..||.+|||+.++++|+
T Consensus 221 i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp 265 (307)
T d1a06a_ 221 ILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHP 265 (307)
T ss_dssp HHTTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHST
T ss_pred HhccCCCCCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcCH
Confidence 0135677889999999999999999999999998
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-41 Score=359.59 Aligned_cols=236 Identities=18% Similarity=0.214 Sum_probs=197.3
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch----hHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD----GHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~----~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~ 93 (778)
..|++++.||.|+ | +||+|+++.+|+.||||++.+..... ...+.+++|+++|++|+||||++++++++++
T Consensus 10 d~Y~~~~~lG~G~fg--~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~-- 85 (293)
T d1jksa_ 10 DYYDTGEELGSGQFA--VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENK-- 85 (293)
T ss_dssp GTEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS--
T ss_pred cCEEEeEEEecCCCe--EEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC--
Confidence 4699999999998 8 99999999999999999998653322 3467899999999999999999999999874
Q ss_pred ccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC----c
Q 004025 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL----D 167 (778)
Q Consensus 94 ~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g----~ 167 (778)
.++||||||| ++|.++|...+. .....+..++.||+.||.|||+ .+++||||||+||+++.+| .
T Consensus 86 ------~~~~iv~E~~~gg~L~~~i~~~~~---l~~~~~~~~~~qi~~al~yLH~-~~ivHrDiKp~Nill~~~~~~~~~ 155 (293)
T d1jksa_ 86 ------TDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHS-LQIAHFDLKPENIMLLDRNVPKPR 155 (293)
T ss_dssp ------SEEEEEEECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEESCSSSSSCC
T ss_pred ------CEEEEEEEcCCCccccchhccccc---cchhHHHHHHHHHHHHHHhhhh-cceeecccccceEEEecCCCcccc
Confidence 4899999999 589999987653 2344566779999999999996 8999999999999999877 4
Q ss_pred EEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh
Q 004025 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR 247 (778)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~ 247 (778)
+||+|||++........ .....++..|+|||++.+ ..++.++|+|||||++|||++|..||......
T Consensus 156 vkl~DfG~a~~~~~~~~-------~~~~~~t~~y~APE~~~~------~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~ 222 (293)
T d1jksa_ 156 IKIIDFGLAHKIDFGNE-------FKNIFGTPEFVAPEIVNY------EPLGLEADMWSIGVITYILLSGASPFLGDTKQ 222 (293)
T ss_dssp EEECCCTTCEECTTSCB-------CSCCCCCGGGCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred eEecchhhhhhcCCCcc-------ccccCCCCcccCHHHHcC------CCCCCcccchhhhHHHHHHHcCCCCCCCCCHH
Confidence 99999999988754321 112244568999999986 35778999999999999999999998643211
Q ss_pred ----c------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ----N------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ----~------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ...+|..+.+++++||..||.+|||++++++|+
T Consensus 223 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp 272 (293)
T d1jksa_ 223 ETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 272 (293)
T ss_dssp HHHHHHHTTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHST
T ss_pred HHHHHHHhcCCCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcCc
Confidence 1 135677889999999999999999999999998
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.4e-41 Score=362.69 Aligned_cols=235 Identities=15% Similarity=0.119 Sum_probs=192.7
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.|++.++||.|+ | +||+|+++.+|+.||||++.+..... ...+.+.+|+++|++|+||||+++++++.++
T Consensus 16 ~y~~l~~lG~G~fg--~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~------ 87 (309)
T d1u5ra_ 16 LFSDLREIGHGSFG--AVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE------ 87 (309)
T ss_dssp HEEEEEEEEECSSS--EEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEET------
T ss_pred hcEeeEEEecCCCe--EEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEEC------
Confidence 499999999999 9 99999999999999999998765433 4566789999999999999999999999874
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
.++||||||| +.|..++..... .....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|||+
T Consensus 88 --~~~~iv~E~~~~g~l~~~~~~~~~---l~e~~~~~i~~qi~~aL~yLH~-~~iiHrDiKp~NILl~~~~~~Kl~DFG~ 161 (309)
T d1u5ra_ 88 --HTAWLVMEYCLGSASDLLEVHKKP---LQEVEIAAVTHGALQGLAYLHS-HNMIHRDVKAGNILLSEPGLVKLGDFGS 161 (309)
T ss_dssp --TEEEEEEECCSEEHHHHHHHHTSC---CCHHHHHHHHHHHHHHHHHHHH-TTCBCCCCSGGGEEEETTTEEEECCCTT
T ss_pred --CEEEEEEEecCCCchHHHHHhCCC---CCHHHHHHHHHHHHHHHHHHHh-CCEeccCCCcceEEECCCCCEEEeeccc
Confidence 4899999999 346555554432 2344466779999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----hc---
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN--- 248 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~~--- 248 (778)
+...... ....++..|+|||++.+... ..++.++|||||||++|||++|..||..... ..
T Consensus 162 a~~~~~~----------~~~~GT~~Y~APE~~~~~~~---~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~ 228 (309)
T d1u5ra_ 162 ASIMAPA----------NSFVGTPYWMAPEVILAMDE---GQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ 228 (309)
T ss_dssp CBSSSSB----------CCCCSCGGGCCHHHHTTTTS---CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH
T ss_pred ccccCCC----------CccccCccccCHHHHhccCC---CCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence 9876432 12245668999999865211 3467899999999999999999998853211 10
Q ss_pred -------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+|..+.+++.+||..||.+|||++++++|+
T Consensus 229 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~Hp 268 (309)
T d1u5ra_ 229 NESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 268 (309)
T ss_dssp SCCCCCSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHCcCChhHCcCHHHHHhCH
Confidence 124677899999999999999999999999998
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=4.2e-41 Score=362.01 Aligned_cols=233 Identities=15% Similarity=0.193 Sum_probs=194.7
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
+|++.+.||.|+ | +||+|+++.+|+.||||++.+.... ....+.+.+|+++|+.++||||++++++++++
T Consensus 5 dy~i~~~lG~G~fg--~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~------ 76 (316)
T d1fota_ 5 DFQILRTLGTGSFG--RVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDA------ 76 (316)
T ss_dssp GEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECS------
T ss_pred HeEEEEEEecCcCc--EEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeC------
Confidence 599999999998 8 9999999999999999999754221 23466789999999999999999999999874
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+||||||| ++|..++...... ....++.++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|||+
T Consensus 77 --~~~~ivmE~~~gg~l~~~~~~~~~~---~~~~~~~~~~qi~~al~~lH~-~~iiHrDiKp~NILl~~~g~vkL~DFG~ 150 (316)
T d1fota_ 77 --QQIFMIMDYIEGGELFSLLRKSQRF---PNPVAKFYAAEVCLALEYLHS-KDIIYRDLKPENILLDKNGHIKITDFGF 150 (316)
T ss_dssp --SEEEEEECCCCSCBHHHHHHHTSSC---CHHHHHHHHHHHHHHHHHHHT-TTEECCCCCGGGEEECTTSCEEECCCSS
T ss_pred --CeeeeEeeecCCccccccccccccc---cccHHHHHHHHHHHhhhhhcc-CcEEccccCchheeEcCCCCEEEecCcc
Confidence 4899999999 4688887765543 234455668999999999995 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh--------
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~-------- 247 (778)
++...... ....++..|+|||++.+ ..++.++|+|||||++|||++|..||......
T Consensus 151 a~~~~~~~---------~~~~Gt~~Y~APE~l~~------~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~ 215 (316)
T d1fota_ 151 AKYVPDVT---------YTLCGTPDYIAPEVVST------KPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILN 215 (316)
T ss_dssp CEECSSCB---------CCCCSCTTTCCHHHHTT------CCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH
T ss_pred ceEecccc---------ccccCcccccCHHHHcC------CCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHc
Confidence 98875421 12345669999999876 35778999999999999999999998643211
Q ss_pred c----cCCCCcchHHHHHHHhccCCCCCC-----ChHHHHhcc
Q 004025 248 N----TASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENS 281 (778)
Q Consensus 248 ~----~~~iP~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~ 281 (778)
. ...+|+.+.+++.+||..||.+|+ +++++++||
T Consensus 216 ~~~~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp 258 (316)
T d1fota_ 216 AELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHP 258 (316)
T ss_dssp CCCCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSG
T ss_pred CCCCCCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcCc
Confidence 1 134667789999999999999996 899999998
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=3.8e-41 Score=355.73 Aligned_cols=247 Identities=15% Similarity=0.200 Sum_probs=203.8
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-------hHHHHHHHHHHHHhcCC-CCCeeeEeeeeE
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-------GHLAAARNGVKRLRTVR-HPNILAFLHSTE 89 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~-------~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e 89 (778)
.+|++.+.||.|+ | +||+|+++.+|+.||||++.+..... ...+.+.+|+.+|++|+ ||||++++++++
T Consensus 3 ~~y~~~~~iG~G~~g--~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 80 (277)
T d1phka_ 3 ENYEPKEILGRGVSS--VVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 80 (277)
T ss_dssp TTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred ccCEEceEEecCcCe--EEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecc
Confidence 5799999999998 8 99999999999999999998764322 23456889999999997 999999999998
Q ss_pred ecccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCc
Q 004025 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD 167 (778)
Q Consensus 90 ~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~ 167 (778)
++ .++||||||| ++|.++|+..+.. ....+..++.||+.||.|||+ ++|+||||||+||+++.+|.
T Consensus 81 ~~--------~~~~ivmE~~~~g~L~~~l~~~~~l---~e~~~~~~~~qi~~al~~lH~-~~ivHrDlkp~Nill~~~~~ 148 (277)
T d1phka_ 81 TN--------TFFFLVFDLMKKGELFDYLTEKVTL---SEKETRKIMRALLEVICALHK-LNIVHRDLKPENILLDDDMN 148 (277)
T ss_dssp CS--------SEEEEEEECCTTCBHHHHHHHHSSC---CHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECTTCC
T ss_pred cC--------cceEEEEEcCCCchHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHH-cCCcccccccceEEEcCCCC
Confidence 74 4899999999 5899999876532 344566679999999999996 99999999999999999999
Q ss_pred EEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh
Q 004025 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR 247 (778)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~ 247 (778)
+||+|||+++.+..... .....++..|++||++.+.-......++.++|+|||||++|||++|+.||......
T Consensus 149 ~kl~DFG~a~~~~~~~~-------~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~ 221 (277)
T d1phka_ 149 IKLTDFGFSCQLDPGEK-------LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM 221 (277)
T ss_dssp EEECCCTTCEECCTTCC-------BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred eEEccchheeEccCCCc-------eeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHH
Confidence 99999999988754211 12234556899999987643333445678999999999999999999998643211
Q ss_pred ----------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcccCCcccccc
Q 004025 248 ----------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEY 290 (778)
Q Consensus 248 ----------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~f 290 (778)
....+|+.+.+++++||+.||.+||++.++++|+ |++.|
T Consensus 222 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~----~~~~~ 276 (277)
T d1phka_ 222 LMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHP----FFQQY 276 (277)
T ss_dssp HHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSG----GGCTT
T ss_pred HHHHHHHhCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCH----HHHHh
Confidence 0125677899999999999999999999999999 66654
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.5e-41 Score=363.46 Aligned_cols=237 Identities=16% Similarity=0.199 Sum_probs=198.1
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
.+|++.+.||.|+ | +||+|+++.+|+.||||++.++.. .....+.+.+|+++|++++||||++++++++++
T Consensus 5 ~dy~~~~~lG~G~fg--~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~----- 77 (337)
T d1o6la_ 5 NDFDYLKLLGKGTFG--KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH----- 77 (337)
T ss_dssp GGEEEEEEEEECSSE--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECS-----
T ss_pred HhcEEEEEEecCcCe--EEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccc-----
Confidence 4699999999998 8 999999999999999999986432 123456788999999999999999999999974
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
.++||||||| ++|..++...+.. .++.++.++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|||
T Consensus 78 ---~~~~iv~ey~~gg~L~~~~~~~~~~---~e~~~~~~~~qil~al~ylH~-~~iiHRDlKP~NILl~~~g~vkl~DFG 150 (337)
T d1o6la_ 78 ---DRLCFVMEYANGGELFFHLSRERVF---TEERARFYGAEIVSALEYLHS-RDVVYRDIKLENLMLDKDGHIKITDFG 150 (337)
T ss_dssp ---SEEEEEEECCTTCBHHHHHHHHSCC---CHHHHHHHHHHHHHHHHHHHH-TTCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred ---cccccceeccCCCchhhhhhcccCC---cHHHHHHHHHHHhhhhhhhhh-cCccccccCHHHeEecCCCCEEEeecc
Confidence 4899999999 5799999886643 344567779999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhhc------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------ 248 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~~------ 248 (778)
+++....... ......+++.|+|||++.+ ..++.++|+|||||++|||++|.+||.......
T Consensus 151 ~a~~~~~~~~------~~~~~~GT~~Y~aPE~~~~------~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~ 218 (337)
T d1o6la_ 151 LCKEGISDGA------TMKTFCGTPEYLAPEVLED------NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218 (337)
T ss_dssp TCBCSCCTTC------CBCCCEECGGGCCGGGGSS------SCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred cccccccCCc------ccccceeCHHHhhhhhccC------CCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHh
Confidence 9987654221 1223456679999999987 467889999999999999999999986543211
Q ss_pred ------cCCCCcchHHHHHHHhccCCCCCCC-----hHHHHhcc
Q 004025 249 ------TASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENS 281 (778)
Q Consensus 249 ------~~~iP~~L~~~i~~lL~~dP~~Rps-----~~~lL~~~ 281 (778)
...++..+.+++++||..||.+|++ +.++++|+
T Consensus 219 ~~~~~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp 262 (337)
T d1o6la_ 219 MEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHR 262 (337)
T ss_dssp HCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSG
T ss_pred cCCCCCCccCCHHHHHHHHhhccCCchhhcccccccHHHHHcCc
Confidence 1346677889999999999999995 89999998
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=5.2e-41 Score=366.21 Aligned_cols=234 Identities=19% Similarity=0.282 Sum_probs=195.5
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
+|++.+.||.|+ | +||+|+++.+|+.||||++.+.. ....+.+++|+++|++|+||||++++++++++
T Consensus 27 ~Y~i~~~lG~G~fg--~Vy~~~~~~~g~~vAvK~i~~~~--~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~------- 95 (350)
T d1koaa2 27 HYDIHEELGTGAFG--VVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDD------- 95 (350)
T ss_dssp TEEEEEEEEEETTE--EEEEEEETTTTEEEEEEEECCCS--HHHHHHHHHHHHHHHHTCCTTBCCEEEEEEET-------
T ss_pred CeEEEEEEecCcCe--EEEEEEECCCCCEEEEEEEcccc--hhhHHHHHHHHHHHHhCCCCCCCcEEEEEEEC-------
Confidence 699999999999 8 99999999999999999997643 33456789999999999999999999999874
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC--CCcEEEEecc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ--TLDWKLHAFD 174 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~--~g~~KL~dFg 174 (778)
..+||||||| ++|.++|.... +...+..+..++.||+.||.|||+ .+++||||||+||+++. +|.+||+|||
T Consensus 96 -~~~~ivmE~~~gg~L~~~l~~~~--~~l~e~~~~~i~~qi~~aL~ylH~-~~iiHrDiKp~NIll~~~~~~~vkL~DFG 171 (350)
T d1koaa2 96 -NEMVMIYEFMSGGELFEKVADEH--NKMSEDEAVEYMRQVCKGLCHMHE-NNYVHLDLKPENIMFTTKRSNELKLIDFG 171 (350)
T ss_dssp -TEEEEEECCCCSCBHHHHHTCTT--SCBCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEESSTTSCCEEECCCT
T ss_pred -CEEEEEEEcCCCCCHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHh-cCCeeeeechhHeeeccCCCCeEEEeecc
Confidence 4899999999 58999885432 123345567779999999999996 99999999999999964 6889999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----hc--
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN-- 248 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~~-- 248 (778)
+++.+..... .....++..|+|||++.+ ..++.++|||||||++|||++|..||..... ..
T Consensus 172 ~a~~~~~~~~-------~~~~~gT~~Y~aPEv~~~------~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~ 238 (350)
T d1koaa2 172 LTAHLDPKQS-------VKVTTGTAEFAAPEVAEG------KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVK 238 (350)
T ss_dssp TCEECCTTSC-------EEEECSCTTTCCHHHHHT------CCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred hheecccccc-------cceecCcccccCHHHHcC------CCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9988765321 223355679999999886 3567899999999999999999999864321 11
Q ss_pred ----------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ----------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+++.+.+++.+||..||.+|||++++|+|+
T Consensus 239 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hp 281 (350)
T d1koaa2 239 SCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHP 281 (350)
T ss_dssp HTCCCSCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHST
T ss_pred hCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCc
Confidence 134677889999999999999999999999998
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=4.8e-41 Score=366.72 Aligned_cols=234 Identities=16% Similarity=0.233 Sum_probs=195.1
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
.|++.+.||.|+ | +||+|+++.+|+.||||++.+... .....+++|+++|++|+||||++++++++++
T Consensus 30 ~Y~i~~~lG~G~fg--~V~~a~~~~~~~~vAiK~i~~~~~--~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~------- 98 (352)
T d1koba_ 30 YYDILEELGSGAFG--VVHRCVEKATGRVFVAKFINTPYP--LDKYTVKNEISIMNQLHHPKLINLHDAFEDK------- 98 (352)
T ss_dssp TEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEECCSH--HHHHHHHHHHHHHTTCCSTTBCCEEEEEECS-------
T ss_pred ceEEEEEEecCCCe--EEEEEEECCCCCEEEEEEECCcch--hHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC-------
Confidence 599999999998 8 999999999999999999986532 2345788999999999999999999999874
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEc--CCCcEEEEecc
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT--QTLDWKLHAFD 174 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~--~~g~~KL~dFg 174 (778)
..+||||||| ++|.+++...+. ...+..+..++.||+.||.|||+ ++|+||||||+||+|+ .+|.+||+|||
T Consensus 99 -~~~~ivmE~~~gg~L~~~~~~~~~--~l~e~~~~~i~~qi~~aL~ylH~-~~iiHRDiKp~NILl~~~~~~~vkL~DFG 174 (352)
T d1koba_ 99 -YEMVLILEFLSGGELFDRIAAEDY--KMSEAEVINYMRQACEGLKHMHE-HSIVHLDIKPENIMCETKKASSVKIIDFG 174 (352)
T ss_dssp -SEEEEEEECCCCCBHHHHTTCTTC--CBCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEESSTTCCCEEECCCT
T ss_pred -CEEEEEEEcCCCChHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH-CCeeecccccccccccccCCCeEEEeecc
Confidence 4899999999 579887655431 13345567779999999999996 9999999999999998 67899999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----hc--
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN-- 248 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~~-- 248 (778)
++..+..... .....++..|+|||++.+ ..++.++|||||||++|||++|.+||..... ..
T Consensus 175 la~~~~~~~~-------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~ 241 (352)
T d1koba_ 175 LATKLNPDEI-------VKVTTATAEFAAPEIVDR------EPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVK 241 (352)
T ss_dssp TCEECCTTSC-------EEEECSSGGGCCHHHHTT------CCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHH
T ss_pred cceecCCCCc-------eeeccCcccccCHHHHcC------CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9988765311 222345568999999886 4678899999999999999999999864321 11
Q ss_pred ----------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ----------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+|+.+.+++.+||..||.+|||+.++|+|+
T Consensus 242 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~Hp 284 (352)
T d1koba_ 242 RCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHP 284 (352)
T ss_dssp HCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTST
T ss_pred hCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCH
Confidence 135677889999999999999999999999998
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-40 Score=352.33 Aligned_cols=240 Identities=18% Similarity=0.255 Sum_probs=192.2
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.+.||.|+ | +||+|+++.+|+.||||++......+...+.+.+|+++|++++||||++++++++++
T Consensus 2 d~Y~~~~~lG~G~fg--~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~------ 73 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYG--VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE------ 73 (298)
T ss_dssp TTEEEEEEEEECSSS--EEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEET------
T ss_pred CCCEeccEEecCcCe--EEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccc------
Confidence 3799999999999 9 999999999999999999976544444456788999999999999999999999874
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
.++||||||| +.+..++....... ..+..+..++.||+.||.|||+ .+||||||||+||+++.++.+||+|||++
T Consensus 74 --~~~~iv~e~~~~~~~~~~~~~~~~~-l~e~~~~~~~~qil~~L~yLH~-~~IiHrDiKpeNIl~~~~~~~kl~DFG~a 149 (298)
T d1gz8a_ 74 --NKLYLVFEFLHQDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAFCHS-HRVLHRDLKPQNLLINTEGAIKLADFGLA 149 (298)
T ss_dssp --TEEEEEEECCSEEHHHHHHHTTTTC-CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEECTTSCEEECSTTHH
T ss_pred --cceeEEEeecCCchhhhhhhhcccC-CCHHHHHHHHHHHHHHHHHhhc-CCEEccccCchheeecccCcceeccCCcc
Confidence 4899999999 56666665543222 3345577779999999999996 99999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hh-----
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LR----- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~----- 247 (778)
......... .....++..|+|||++... ..++.++|+|||||++|+|++|..||.... +.
T Consensus 150 ~~~~~~~~~------~~~~~gt~~y~apE~~~~~-----~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~ 218 (298)
T d1gz8a_ 150 RAFGVPVRT------YTHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 218 (298)
T ss_dssp HHHCCCSBC------TTCCBCCCTTCCHHHHTTC-----SSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred eeccCCccc------ceeecccceeeehhhhccc-----cCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHh
Confidence 877543211 1223456799999987663 346789999999999999999999985321 00
Q ss_pred --------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 --------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 --------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+++.+.+++++||..||.+|||+.++++|+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ 284 (298)
T d1gz8a_ 219 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 284 (298)
T ss_dssp HCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSG
T ss_pred cCCCchhhccccccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCH
Confidence 0013445678899999999999999999999998
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.6e-40 Score=362.43 Aligned_cols=234 Identities=15% Similarity=0.200 Sum_probs=196.9
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
.+|++.+.||.|+ | +||+|+++.+|+.||||++.+.... ....+.+.+|+++|+.++||||++++++++..
T Consensus 41 d~y~i~~~lG~G~fg--~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~----- 113 (350)
T d1rdqe_ 41 DQFDRIKTLGTGSFG--RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN----- 113 (350)
T ss_dssp GGEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS-----
T ss_pred cCeEEEEEeecCcCc--EEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccc-----
Confidence 4699999999999 9 9999999999999999999754221 23456789999999999999999999999874
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+|+||||+ ++|..++...+.. ....++.++.||+.||.|||+ .+||||||||+||+++.+|.+||+|||
T Consensus 114 ---~~~~~v~e~~~~g~l~~~l~~~~~l---~e~~~~~i~~qi~~aL~yLH~-~~iiHRDIKP~NILl~~~g~ikL~DFG 186 (350)
T d1rdqe_ 114 ---SNLYMVMEYVAGGEMFSHLRRIGRF---SEPHARFYAAQIVLTFEYLHS-LDLIYRDLKPENLLIDQQGYIQVTDFG 186 (350)
T ss_dssp ---SEEEEEEECCTTCBHHHHHHHHCCC---CHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred ---cccccccccccccchhhhHhhcCCC---CHHHHHHHHHHHHHHHHHHHh-CCEecCcCCHHHcccCCCCCEEeeece
Confidence 4899999999 5788888776532 344567779999999999996 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh-------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------- 247 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------- 247 (778)
+++.+.... ....++..|+|||++.+ ..++.++|+|||||++|||++|.+||......
T Consensus 187 ~a~~~~~~~---------~~~~Gt~~Y~APE~~~~------~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~ 251 (350)
T d1rdqe_ 187 FAKRVKGRT---------WTLCGTPEALAPEIILS------KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 251 (350)
T ss_dssp TCEECSSCB---------CCCEECGGGCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred eeeeccccc---------ccccCccccCCHHHHcC------CCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHh
Confidence 998875421 12345668999999987 46778999999999999999999998653211
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCC-----ChHHHHhcc
Q 004025 248 -----NTASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENS 281 (778)
Q Consensus 248 -----~~~~iP~~L~~~i~~lL~~dP~~Rp-----s~~~lL~~~ 281 (778)
....+++.+.+++++||..||.+|+ +++++++|+
T Consensus 252 ~~~~~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp 295 (350)
T d1rdqe_ 252 SGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHK 295 (350)
T ss_dssp HCCCCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSG
T ss_pred cCCCCCCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcCc
Confidence 1245777899999999999999995 899999998
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=5.2e-40 Score=360.22 Aligned_cols=237 Identities=14% Similarity=0.162 Sum_probs=193.1
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch----hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD----GHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~----~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~ 92 (778)
-.+|++.+.||.|+ | +||+|+++.+|+.||||++.+..... .......+++++++.++||||++++++++++
T Consensus 3 lddy~i~~~lG~G~fg--~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~- 79 (364)
T d1omwa3 3 MNDFSVHRIIGRGGFG--EVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP- 79 (364)
T ss_dssp STTEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECS-
T ss_pred HHhCeeeeEEecCCCe--EEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEEC-
Confidence 35799999999999 9 99999999999999999997532211 1222234557888888999999999999874
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEE
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
..+||||||| ++|..+|...... .+..+..++.||+.||.|||+ .+++||||||+||+++.+|.+||
T Consensus 80 -------~~~~ivmE~~~gg~L~~~l~~~~~~---~e~~~~~~~~qi~~aL~ylH~-~~iiHrDlKP~NILl~~~g~iKl 148 (364)
T d1omwa3 80 -------DKLSFILDLMNGGDLHYHLSQHGVF---SEADMRFYAAEIILGLEHMHN-RFVVYRDLKPANILLDEHGHVRI 148 (364)
T ss_dssp -------SEEEEEECCCCSCBHHHHHHHHCSC---CHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECSSSCEEE
T ss_pred -------CEEEEEEEecCCCcHHHHHHhcccc---cHHHHHHHHHHHHHHHHHHHH-CCccceeeccceeEEcCCCcEEE
Confidence 4899999999 5799999876543 234566779999999999996 99999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---- 246 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l---- 246 (778)
+|||+++.+.... .....++..|+|||++..+ ..++.++|+|||||++|||++|..||.....
T Consensus 149 ~DFGla~~~~~~~--------~~~~~GT~~y~APE~~~~~-----~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~ 215 (364)
T d1omwa3 149 SDLGLACDFSKKK--------PHASVGTHGYMAPEVLQKG-----VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH 215 (364)
T ss_dssp CCCTTCEECSSSC--------CCSCCSCGGGCCHHHHSTT-----CCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHH
T ss_pred eeeceeeecCCCc--------ccccccccccchhHHhhcC-----CCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 9999998775421 1123456799999998753 4578899999999999999999999864211
Q ss_pred ---hc--------cCCCCcchHHHHHHHhccCCCCCCC-----hHHHHhcc
Q 004025 247 ---RN--------TASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENS 281 (778)
Q Consensus 247 ---~~--------~~~iP~~L~~~i~~lL~~dP~~Rps-----~~~lL~~~ 281 (778)
+. ...+++.+.+++.+||..||.+||+ ++++++|+
T Consensus 216 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp 266 (364)
T d1omwa3 216 EIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESP 266 (364)
T ss_dssp HHHHHSSSCCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSG
T ss_pred HHHHhcccCCCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcCc
Confidence 11 1356778999999999999999999 69999998
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-40 Score=352.66 Aligned_cols=235 Identities=19% Similarity=0.249 Sum_probs=182.5
Q ss_pred eccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch---hHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 23 IGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD---GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 23 i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~---~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
..+.||.|+ | +||+|+++.+|+.||||++....... ...+.+.+|+++|++++||||+++++++..+
T Consensus 2 ~l~~lG~G~fg--~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~------- 72 (299)
T d1ua2a_ 2 KLDFLGEGQFA--TVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHK------- 72 (299)
T ss_dssp EEEEEEEETTE--EEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCT-------
T ss_pred cceEeccCcCe--EEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccC-------
Confidence 356789998 8 99999999999999999997643222 2345688999999999999999999999874
Q ss_pred ccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 99 ~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
.++||||||| +.+...+..... ...+..+..+++||+.||+|||+ .+++||||||+||+++.+|.+||+|||++.
T Consensus 73 -~~~~ivmE~~~~~~~~~~~~~~~--~l~~~~~~~~~~qil~aL~~lH~-~~iiHrDiKp~NIli~~~~~~KL~DFG~a~ 148 (299)
T d1ua2a_ 73 -SNISLVFDFMETDLEVIIKDNSL--VLTPSHIKAYMLMTLQGLEYLHQ-HWILHRDLKPNNLLLDENGVLKLADFGLAK 148 (299)
T ss_dssp -TCCEEEEECCSEEHHHHHTTCCS--SCCSSHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred -CceeehhhhhcchHHhhhhhccc--CCCHHHHHHHHHHHHHHHHHhhc-cceecccCCcceEEecCCCccccccCcccc
Confidence 3899999999 444444433221 12233466779999999999996 999999999999999999999999999998
Q ss_pred ccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hhc-----
Q 004025 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRN----- 248 (778)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~~----- 248 (778)
........ .....++..|+|||++.+. ..++.++|||||||++|||++|.+||.... +..
T Consensus 149 ~~~~~~~~------~~~~~gt~~y~aPE~~~~~-----~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~ 217 (299)
T d1ua2a_ 149 SFGSPNRA------YTHQVVTRWYRAPELLFGA-----RMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETL 217 (299)
T ss_dssp TTTSCCCC------CCCSCCCCTTCCHHHHTTC-----SCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHH
T ss_pred ccCCCccc------ccceecChhhccHHHHccC-----CCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhc
Confidence 76553211 1223556789999998753 457889999999999999999998885321 100
Q ss_pred -------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+++.+.+++++||..||++|||+.++|+|+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp 281 (299)
T d1ua2a_ 218 GTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK 281 (299)
T ss_dssp CCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred CCCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCH
Confidence 023456788899999999999999999999998
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.7e-40 Score=354.61 Aligned_cols=234 Identities=17% Similarity=0.228 Sum_probs=194.0
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++++.||.|+ | +||+|+++.+|+.||||++.++.. ....+++|+++|++++||||++++++++++
T Consensus 5 ~rY~i~~~lG~G~fg--~Vy~~~~~~~~~~~AiK~i~~~~~---~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~------ 73 (321)
T d1tkia_ 5 EKYMIAEDLGRGEFG--IVHRCVETSSKKTYMAKFVKVKGT---DQVLVKKEISILNIARHRNILHLHESFESM------ 73 (321)
T ss_dssp TTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEECCCTH---HHHHHHHHHHHHHHSCCTTBCCEEEEEEET------
T ss_pred cceEEEEEEecCCCe--EEEEEEECCCCcEEEEEEEcCCcc---cHHHHHHHHHHHHhCCCCCCCeEEEEEEEC------
Confidence 3699999999998 8 999999999999999999986532 234688999999999999999999999974
Q ss_pred cccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCC--CcEEEEec
Q 004025 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT--LDWKLHAF 173 (778)
Q Consensus 98 ~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~--g~~KL~dF 173 (778)
.++||||||| ++|.++|...+. ...+..+..++.||+.||.|||+ .+|+||||||+||+++.+ +.+||+||
T Consensus 74 --~~~~lvmE~~~gg~L~~~i~~~~~--~l~e~~~~~i~~qi~~al~yLH~-~~iiHrDlKp~NIll~~~~~~~ikl~DF 148 (321)
T d1tkia_ 74 --EELVMIFEFISGLDIFERINTSAF--ELNEREIVSYVHQVCEALQFLHS-HNIGHFDIRPENIIYQTRRSSTIKIIEF 148 (321)
T ss_dssp --TEEEEEECCCCCCBHHHHHTSSSC--CCCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEESSSSCCCEEECCC
T ss_pred --CEEEEEEecCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH-cCCCcccccccceeecCCCceEEEEccc
Confidence 4899999999 479999976542 12345567779999999999996 899999999999999854 57999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh----c-
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----N- 248 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~----~- 248 (778)
|++....... ......++..|++||...+ ..++.++|+|||||++|+|++|.+||...... .
T Consensus 149 G~~~~~~~~~-------~~~~~~~t~~y~ape~~~~------~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i 215 (321)
T d1tkia_ 149 GQARQLKPGD-------NFRLLFTAPEYYAPEVHQH------DVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENI 215 (321)
T ss_dssp TTCEECCTTC-------EEEEEESCGGGSCHHHHTT------CEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH
T ss_pred chhhccccCC-------cccccccccccccchhccC------CCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 9998775421 1122345568999999876 35678999999999999999999998643211 1
Q ss_pred -----------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -----------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...++..+.+++++||..||.+||++.++++|+
T Consensus 216 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp 259 (321)
T d1tkia_ 216 MNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHP 259 (321)
T ss_dssp HHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred HhCCCCCChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhcCH
Confidence 135677889999999999999999999999998
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.8e-40 Score=345.44 Aligned_cols=242 Identities=17% Similarity=0.200 Sum_probs=188.8
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
++...|++++.||.|+ | +||+|+.+ ..||||++..........+.+++|+++|++++||||+++++++..
T Consensus 5 i~~~~~~~~~~lG~G~fg--~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~---- 75 (276)
T d1uwha_ 5 IPDGQITVGQRIGSGSFG--TVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA---- 75 (276)
T ss_dssp CCTTCCCCCSEEEECSSC--EEEEEESS---SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS----
T ss_pred cccccEEEEEEEeeCCCc--EEEEEEEC---CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec----
Confidence 4556799999999999 9 99999864 369999998765555667889999999999999999999997643
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
..+||||||| ++|.++|...... .....+..++.||+.||.|||+ .+||||||||+||+++.+|.+||+|
T Consensus 76 -----~~~~lv~Ey~~~g~L~~~l~~~~~~--~~~~~~~~i~~qi~~gl~yLH~-~~ivHrDlKp~NiLl~~~~~~Kl~D 147 (276)
T d1uwha_ 76 -----PQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGMDYLHA-KSIIHRDLKSNNIFLHEDLTVKIGD 147 (276)
T ss_dssp -----SSCEEEEECCCEEEHHHHHHTSCCC--CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEEETTSSEEECC
T ss_pred -----cEEEEEEecCCCCCHHHHHhhccCC--CCHHHHHHHHHHHHHHHHHHhc-CCEeccccCHHHEEEcCCCCEEEcc
Confidence 2589999999 5899999764321 2334456679999999999996 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChh----hhh-
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----ELR- 247 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~----~l~- 247 (778)
||+++........ .......++..|+|||++.+.- ...++.++|||||||++|||++|..||... .+.
T Consensus 148 FGla~~~~~~~~~----~~~~~~~gt~~y~APE~l~~~~---~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~ 220 (276)
T d1uwha_ 148 FGLATVKSRWSGS----HQFEQLSGSILWMAPEVIRMQD---KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF 220 (276)
T ss_dssp CCCSCC----------------CCCCGGGCCHHHHTTCS---SCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHH
T ss_pred ccceeeccccCCc----ccccccccCcccCCHHHHhccc---CCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHH
Confidence 9999776542111 0111223456899999986521 124678999999999999999999998531 110
Q ss_pred -------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|+.+.+++.+||..||.+|||+.+++++.
T Consensus 221 ~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~L 267 (276)
T d1uwha_ 221 MVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 267 (276)
T ss_dssp HHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHhcCCCCCcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHH
Confidence 0135678899999999999999999999998764
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.7e-40 Score=352.29 Aligned_cols=237 Identities=15% Similarity=0.185 Sum_probs=193.2
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHh-cCCCCCeeeEeeeeEeccccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLR-TVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ev~~Lk-~LrHPnIlk~~d~~e~e~~~g 95 (778)
.+|++++.||.|+ | +||+|+++.+|+.||||++.+... .+...+.+.+|..++. .++||||++++++++++
T Consensus 2 ddy~i~~~iG~G~fg--~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~---- 75 (320)
T d1xjda_ 2 EDFILHKMLGKGSFG--KVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTK---- 75 (320)
T ss_dssp TTEEEEEEEEECSSS--EEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECS----
T ss_pred CCeEEeeEEecCCCc--EEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccC----
Confidence 3699999999999 9 999999999999999999975321 1223455666777665 78999999999999874
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..+||||||| ++|.+++...... .+..+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+||
T Consensus 76 ----~~~yivmEy~~~g~L~~~i~~~~~~---~e~~~~~~~~qi~~al~ylH~-~~iiHrDikp~NiL~~~~~~~kl~DF 147 (320)
T d1xjda_ 76 ----ENLFFVMEYLNGGDLMYHIQSCHKF---DLSRATFYAAEIILGLQFLHS-KGIVYRDLKLDNILLDKDGHIKIADF 147 (320)
T ss_dssp ----SEEEEEEECCTTCBHHHHHHHHSSC---CHHHHHHHHHHHHHHHHHHHH-TTCBCCCCCGGGEEECTTSCEEECCC
T ss_pred ----CceeEEEeecCCCcHHHHhhccCCC---CHHHHHHHHHHHHHHHHHHHh-CCeeeccCcccceeecCCCceecccc
Confidence 4899999999 6899999876543 234466779999999999996 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------ 247 (778)
|+++....... ......++..|+|||++.+ ..++.++|+|||||++|||++|..||......
T Consensus 148 G~a~~~~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i 215 (320)
T d1xjda_ 148 GMCKENMLGDA------KTNTFCGTPDYIAPEILLG------QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 215 (320)
T ss_dssp TTCBCCCCTTC------CBCCCCSCGGGCCHHHHTT------CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred chhhhcccccc------cccccCCCCCcCCHHHHcC------CCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 99986654221 1222345668999999987 46788999999999999999999999643211
Q ss_pred --c----cCCCCcchHHHHHHHhccCCCCCCChH-HHHhcc
Q 004025 248 --N----TASIPKSLLPDYQRLLSSMPSRRLNSS-KLIENS 281 (778)
Q Consensus 248 --~----~~~iP~~L~~~i~~lL~~dP~~Rps~~-~lL~~~ 281 (778)
. ...+|+.+.+++++||..||.+||++. ++++|+
T Consensus 216 ~~~~~~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~hp 256 (320)
T d1xjda_ 216 RMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHP 256 (320)
T ss_dssp HHCCCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSG
T ss_pred HcCCCCCCccCCHHHHHHHHHhcccCCCCCcCHHHHHHhCc
Confidence 1 134677889999999999999999995 899998
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.2e-39 Score=345.87 Aligned_cols=237 Identities=15% Similarity=0.211 Sum_probs=190.1
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|+++++||.|+ | +||+|+++.+|+.||||++..... ..+.+.+|+++|++|+||||+++++++.++
T Consensus 15 ~~~~~~~~~~iG~G~fg--~Vy~a~~~~~~~~vAvK~i~~~~~---~~~~~~~E~~il~~l~HpnIv~~~~~~~~~---- 85 (287)
T d1opja_ 15 ERTDITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTRE---- 85 (287)
T ss_dssp CGGGEEEEEETTTTTTS--SEEEEEEGGGTEEEEEEECCTTCS---CHHHHHHHHHHHHHCCCTTBCCEEEEECSS----
T ss_pred cHHHeEEeeEEeeCCCe--EEEEEEECCCCeEEEEEEECCccc---hHHHHHHHHHHHHhCCCCCEecCCccEeeC----
Confidence 344689999999999 9 899999999999999999875432 245688999999999999999999999764
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
..+||||||| ++|..++...... ......+..++.||+.||+|||+ .+|+||||||+||+|+.+|.+||+||
T Consensus 86 ----~~~~iv~E~~~~g~l~~~l~~~~~~-~~~~~~~~~i~~qi~~gL~yLH~-~~iiHrDlKp~NILl~~~~~~Kl~DF 159 (287)
T d1opja_ 86 ----PPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLVGENHLVKVADF 159 (287)
T ss_dssp ----SSCEEEEECCTTCBHHHHHHHSCTT-TSCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEECGGGCEEECCC
T ss_pred ----CeeEEEeecccCcchHHHhhhcccc-chHHHHHHHHHHHHHHHHHHHHH-CCcccCccccCeEEECCCCcEEEccc
Confidence 3789999999 5799998765432 22344466679999999999996 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCC-CChhhhh-----
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL-SKTEELR----- 247 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p-~~~~~l~----- 247 (778)
|+++....... .......++..|+|||++.+ ..++.++|||||||++|||++|+.| +......
T Consensus 160 G~a~~~~~~~~-----~~~~~~~g~~~y~aPE~~~~------~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~ 228 (287)
T d1opja_ 160 GLSRLMTGDTY-----TAHAGAKFPIKWTAPESLAY------NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL 228 (287)
T ss_dssp CCTTTCCSSSS-----EEETTEEECGGGCCHHHHHH------CCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH
T ss_pred cceeecCCCCc-----eeeccccccccccChHHHcC------CCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHH
Confidence 99987654321 11111233458999999876 3678899999999999999997654 4322111
Q ss_pred --------ccCCCCcchHHHHHHHhccCCCCCCChHHHHh
Q 004025 248 --------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 248 --------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
....+|..+.+++.+||+.||.+|||+.++++
T Consensus 229 i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~ 268 (287)
T d1opja_ 229 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 268 (287)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HhcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 11357778999999999999999999999876
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.3e-40 Score=345.06 Aligned_cols=237 Identities=20% Similarity=0.234 Sum_probs=192.0
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch----hHHHHHHHHHHHHhcCC--CCCeeeEeeeeEe
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD----GHLAAARNGVKRLRTVR--HPNILAFLHSTEV 90 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~----~~~~~~~~ev~~Lk~Lr--HPnIlk~~d~~e~ 90 (778)
..+|++++.||+|+ | +||+|+++.+|+.||||++.+....+ .....+.+|+.+|++++ ||||+++++++++
T Consensus 3 ~~~Y~i~~~lG~G~fg--~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~ 80 (273)
T d1xwsa_ 3 ESQYQVGPLLGSGGFG--SVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 80 (273)
T ss_dssp TTTEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CCeEEEeEEEeeCCCe--EEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEee
Confidence 34799999999998 8 99999999999999999998643221 11233668999999997 9999999999987
Q ss_pred cccccCCcccEEEEEecCCc---ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC-CC
Q 004025 91 ENIDATSTKITIYIVTEPVM---PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ-TL 166 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v~---~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~-~g 166 (778)
+ ..+|+||||+. .+.+++...... .++.++.++.||+.||.|||+ .+++||||||+||+++. ++
T Consensus 81 ~--------~~~~lv~e~~~~~~~l~~~~~~~~~l---~e~~~~~~~~qi~~al~~lH~-~~iiHrDiKp~NIll~~~~~ 148 (273)
T d1xwsa_ 81 P--------DSFVLILERPEPVQDLFDFITERGAL---QEELARSFFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRG 148 (273)
T ss_dssp S--------SEEEEEEECCSSEEEHHHHHHHHCSC---CHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEEETTTT
T ss_pred C--------CeEEEEEEeccCcchHHHHHhccCCC---CHHHHHHHHHHHHHHHHHHHH-CCCccccCcccceEEecCCC
Confidence 4 48999999993 477777765432 344566679999999999996 99999999999999985 57
Q ss_pred cEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh
Q 004025 167 DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL 246 (778)
Q Consensus 167 ~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l 246 (778)
.+||+|||++....... .....++..|+|||++.+. ..++.++|+|||||++|||++|..||...+-
T Consensus 149 ~vkl~DFG~a~~~~~~~--------~~~~~GT~~y~aPE~~~~~-----~~~~~~~DiwSlGvilyell~g~~Pf~~~~~ 215 (273)
T d1xwsa_ 149 ELKLIDFGSGALLKDTV--------YTDFDGTRVYSPPEWIRYH-----RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 215 (273)
T ss_dssp EEEECCCTTCEECCSSC--------BCCCCSCGGGSCHHHHHHS-----CBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH
T ss_pred eEEECccccceeccccc--------ccccccCCCcCCHHHHcCC-----CCCCcccccccceeeehhHhhCCCCCCCchH
Confidence 99999999998654321 1123456689999998763 2345689999999999999999999875431
Q ss_pred --h----ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 --R----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 --~----~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+ -...+|..+.+++++||..||.+|||+.++++|+
T Consensus 216 i~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp 256 (273)
T d1xwsa_ 216 IIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHP 256 (273)
T ss_dssp HHHCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred HhhcccCCCCCCCHHHHHHHHHHccCCHhHCcCHHHHhcCH
Confidence 1 1246788899999999999999999999999998
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=4.7e-39 Score=340.67 Aligned_cols=238 Identities=15% Similarity=0.253 Sum_probs=190.5
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.++||.|+ | +||+|+++ +|+.||||++......+...+.+.+|+++|++|+||||++++++++.++
T Consensus 2 ~~Y~~~~~iG~G~fg--~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~----- 73 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYG--VVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKK----- 73 (286)
T ss_dssp CSEEEEEEEEEETTE--EEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSS-----
T ss_pred CCceeccEEecCCCc--EEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCC-----
Confidence 3799999999998 8 99999986 7899999999876555555678899999999999999999999998743
Q ss_pred cccEEEEEecCCc-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
.+||++|++. .+...+.... .......+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|||++
T Consensus 74 ---~~~i~~e~~~~~~~~~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~-~~IvHrDiKp~NIll~~~~~~kl~DfG~a 147 (286)
T d1ob3a_ 74 ---RLVLVFEHLDQDLKKLLDVCE--GGLESVTAKSFLLQLLNGIAYCHD-RRVLHRDLKPQNLLINREGELKIADFGLA 147 (286)
T ss_dssp ---CEEEEEECCSEEHHHHHHTST--TCCCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEECTTSCEEECCTTHH
T ss_pred ---ceeEEEEeehhhhHHHHHhhc--CCcchhhhHHHHHHHHHHHHHhcc-CcEEecCCCCceeeEcCCCCEEecccccc
Confidence 8999999994 4554444322 223455677789999999999996 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hhc----
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRN---- 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~~---- 248 (778)
........ ......++..|++||.+.+. ..++.++|+|||||++|||++|+.||.... +.+
T Consensus 148 ~~~~~~~~------~~~~~~~~~~y~~pE~~~~~-----~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~ 216 (286)
T d1ob3a_ 148 RAFGIPVR------KYTHEIVTLWYRAPDVLMGS-----KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRI 216 (286)
T ss_dssp HHHCC---------------CCCTTCCHHHHTTC-----CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred eecccCcc------ccceecccchhhhHHHHhCC-----CCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHh
Confidence 87754321 11223455689999998763 456889999999999999999999985321 000
Q ss_pred ---------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 ---------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ---------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+++.+.+++++||..||++|||+.++++|+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp 282 (286)
T d1ob3a_ 217 LGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHA 282 (286)
T ss_dssp HCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSG
T ss_pred hCCCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcCc
Confidence 123455678899999999999999999999998
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=6.7e-39 Score=338.10 Aligned_cols=243 Identities=18% Similarity=0.222 Sum_probs=191.4
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
..+|++.+.||.|+ | +||+|+++.+|+.||||++.+.... ......+.+|+++|+.++||||++++++++.++..
T Consensus 6 ~drY~i~~~lG~G~fg--~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~- 82 (277)
T d1o6ya_ 6 SDRYELGEILGFGGMS--EVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPA- 82 (277)
T ss_dssp TTTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSS-
T ss_pred cceeEEeEEEeeCCCe--EEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCC-
Confidence 35699999999998 8 9999999999999999999876443 34567799999999999999999999999876532
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
...+||||||| ++|..++...+.. ....+..++.||+.||.|||+ .+++||||||+||+++.++..+|+||
T Consensus 83 ---~~~~~lvmE~~~g~~L~~~~~~~~~l---~~~~~~~i~~qi~~al~~lH~-~~iiHrDiKP~NIll~~~~~~~l~d~ 155 (277)
T d1o6ya_ 83 ---GPLPYIVMEYVDGVTLRDIVHTEGPM---TPKRAIEVIADACQALNFSHQ-NGIIHRDVKPANIMISATNAVKVMDF 155 (277)
T ss_dssp ---SEEEEEEEECCCEEEHHHHHHHHCSC---CHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEEETTSCEEECCC
T ss_pred ---CceEEEEEECCCCCEehhhhcccCCC---CHHHHHHHHHHHHHHHHHHHh-CCccCccccCcccccCccccceeehh
Confidence 34789999999 4799888776532 344466679999999999996 99999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh------
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~------ 247 (778)
|++......... ........++..|+|||++.+ ..++.++|||||||++|||++|.+||......
T Consensus 156 ~~~~~~~~~~~~---~~~~~~~~Gt~~Y~aPE~~~~------~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~ 226 (277)
T d1o6ya_ 156 GIARAIADSGNS---VTQTAAVIGTAQYLSPEQARG------DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQH 226 (277)
T ss_dssp TTCEECC-------------------TTCCHHHHTT------CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred hhhhhhcccccc---ccccccccCcccccCHHHHcC------CCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHH
Confidence 998766442211 111223355679999999876 35778999999999999999999998643211
Q ss_pred ----------ccCCCCcchHHHHHHHhccCCCCCC-ChHHHHh
Q 004025 248 ----------NTASIPKSLLPDYQRLLSSMPSRRL-NSSKLIE 279 (778)
Q Consensus 248 ----------~~~~iP~~L~~~i~~lL~~dP~~Rp-s~~~lL~ 279 (778)
....+|+.+.+++.+||..||.+|| +++++++
T Consensus 227 ~~~~~~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~ 269 (277)
T d1o6ya_ 227 VREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRA 269 (277)
T ss_dssp HHCCCCCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred HhcCCCCCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHH
Confidence 1246788899999999999999999 5666543
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.6e-39 Score=337.06 Aligned_cols=236 Identities=13% Similarity=0.111 Sum_probs=180.4
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
..+|++.++||.|+ | +||+|+++ +++.||||++...... .+.+.+|++.+++++||||+++++++..+
T Consensus 4 p~~~~~~~~iG~G~fg--~Vy~~~~~-~~~~vAvK~i~~~~~~---~~~~~~E~~~l~~l~HpnIv~~~g~~~~~----- 72 (263)
T d1sm2a_ 4 PSELTFVQEIGSGQFG--LVHLGYWL-NKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCLEQ----- 72 (263)
T ss_dssp CSCEEEEEEEECCSSC--CEEEEEET-TTEEEEEEECCSSSSC---HHHHHHHHHHHHHCCCTTBCCEEEEECSS-----
T ss_pred hHHcEEEEEEeeCCCe--EEEEEEEC-CCCEEEEEEECCCcCc---HHHHHHHHHHHHhcCCCCcccccceeccC-----
Confidence 35799999999999 9 89999987 5778999999764333 34688999999999999999999999864
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+||||||| ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 73 ---~~~~lv~E~~~~g~L~~~l~~~~~~--~~~~~~~~i~~qia~gl~~lH~-~~iiHrDlKp~Nill~~~~~~Kl~DFG 146 (263)
T d1sm2a_ 73 ---APICLVFEFMEHGCLSDYLRTQRGL--FAAETLLGMCLDVCEGMAYLEE-ACVIHRDLAARNCLVGENQVIKVSDFG 146 (263)
T ss_dssp ---SSCEEEEECCTTCBHHHHHHTTTTC--CCHHHHHHHHHHHHHHHHHHHH-TTCCCTTCSGGGEEECGGGCEEECSCC
T ss_pred ---CceEEEEEecCCCcHHHHhhccccC--CCHHHHHHHHHHHHHHHHhhhc-cceeecccchhheeecCCCCeEecccc
Confidence 3789999999 5899988765322 2233445569999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhC-CCCCChhhh----hc-
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG-MRLSKTEEL----RN- 248 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg-~~p~~~~~l----~~- 248 (778)
+++........ ......++..|+|||++.+ ..++.++|+|||||++|||+++ .+++..... ..
T Consensus 147 la~~~~~~~~~-----~~~~~~gt~~y~aPE~l~~------~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i 215 (263)
T d1sm2a_ 147 MTRFVLDDQYT-----SSTGTKFPVKWASPEVFSF------SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 215 (263)
T ss_dssp -----------------------CTTSCCHHHHTT------CCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHH
T ss_pred hheeccCCCce-----eecceecCcccCChHHhcC------CCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHH
Confidence 99877543211 1122345568999999886 3678899999999999999995 555543211 11
Q ss_pred --------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 --------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 --------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+|..+.+++.+||..||.+||++.+++++-
T Consensus 216 ~~~~~~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L 256 (263)
T d1sm2a_ 216 STGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQL 256 (263)
T ss_dssp HHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HhcCCCCCccccCHHHHHHHHHHccCCHhHCcCHHHHHHHH
Confidence 134567789999999999999999999998763
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=4.5e-39 Score=343.50 Aligned_cols=243 Identities=14% Similarity=0.154 Sum_probs=179.7
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCC---cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGS---PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~---~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~ 92 (778)
....|++++.||.|+ | +||+|+++.+|+ .|+||.+.... .+...+.+.+|+++|++|+||||+++++++..+
T Consensus 24 ~~~~~~~~~~lG~G~fg--~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~- 99 (299)
T d1jpaa_ 24 DISCVKIEQVIGAGEFG--EVCSGHLKLPGKREIFVAIKTLKSGY-TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKS- 99 (299)
T ss_dssp CGGGEEEEEEEEECSSS--EEEEEEECC---CCEEEEEEECCSSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS-
T ss_pred ChhhcEEeeEEeeCCCe--EEEEEEEeCCCCEEEEEEEEEECccc-CHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeC-
Confidence 345699999999999 9 999999988775 48888876543 334566789999999999999999999999763
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEE
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
..+||||||| ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+|+.+|.+||
T Consensus 100 -------~~~~iv~Ey~~~g~L~~~~~~~~~~--l~~~~~~~i~~qia~gl~yLH~-~~iiHrDlKp~NILl~~~~~~Kl 169 (299)
T d1jpaa_ 100 -------TPVMIITEFMENGSLDSFLRQNDGQ--FTVIQLVGMLRGIAAGMKYLAD-MNYVHRDLAARNILVNSNLVCKV 169 (299)
T ss_dssp -------SSCEEEEECCTTEEHHHHHHTTTTC--SCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEECTTCCEEE
T ss_pred -------CEEEEEEEecCCCcceeeeccccCC--CCHHHHHHHHHHHHHHHHHHhh-CCCccCccccceEEECCCCcEEE
Confidence 3799999999 5798888764321 2233455669999999999996 89999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh--
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR-- 247 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~-- 247 (778)
+|||+++.+........ ........++..|+|||++.+ ..++.++|||||||++|||++ |.+||......
T Consensus 170 ~DFGla~~~~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~------~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~ 242 (299)
T d1jpaa_ 170 SDFGLSRFLEDDTSDPT-YTSALGGKIPIRWTAPEAIQY------RKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDV 242 (299)
T ss_dssp CCC------------------------CGGGSCHHHHHS------CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH
T ss_pred CCcccceEccCCCCcce-eeecccccCCccccCHHHHhc------CCCCcccccccchHHHHHHHhCCCCCCCCCCHHHH
Confidence 99999987765321111 000111234558999999876 367789999999999999997 78887532111
Q ss_pred -----------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 248 -----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 248 -----------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
....+|..+.+++.+||+.||.+||++.++++.
T Consensus 243 ~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~ 286 (299)
T d1jpaa_ 243 INAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNT 286 (299)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred HHHHHcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 113567789999999999999999999998865
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-38 Score=347.40 Aligned_cols=241 Identities=16% Similarity=0.263 Sum_probs=192.5
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
...|++.++||.|+ | +||+|+++.+|+.||||++.+....+...+.+.+|+++|+.|+||||+++++++......
T Consensus 17 ~~~Y~~i~~lG~G~fg--~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~-- 92 (346)
T d1cm8a_ 17 RAVYRDLQPVGSGAYG--AVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETL-- 92 (346)
T ss_dssp BSSEEEEEEC--------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSST--
T ss_pred CCcEEEEEEEecCCCe--EEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccc--
Confidence 45799999999999 9 899999999999999999987666666678899999999999999999999999764311
Q ss_pred CcccEEEEEecCCcC-hHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 97 STKITIYIVTEPVMP-LSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 97 ~~~~~lyIVtE~v~~-L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
....++|||||||+. |..+++...+ ....++.++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|||+
T Consensus 93 ~~~~~~~lv~e~~~~~l~~~~~~~~l----~~~~~~~~~~qi~~aL~~LH~-~~IiHrDiKp~NIL~~~~~~~kl~Dfg~ 167 (346)
T d1cm8a_ 93 DDFTDFYLVMPFMGTDLGKLMKHEKL----GEDRIQFLVYQMLKGLRYIHA-AGIIHRDLKPGNLAVNEDCELKILDFGL 167 (346)
T ss_dssp TTCCCCEEEEECCSEEHHHHHHHCCC----CHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred cccceEEEEEecccccHHHHHHhccc----cHHHHHHHHHHHHHHHHHHHh-CCCcccccCcchhhcccccccccccccc
Confidence 013468999999964 6666655432 345577779999999999996 9999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----h----
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R---- 247 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~---- 247 (778)
+....... ....++..|+|||++.+. ..++.++|+|||||++|+|++|.+||..... .
T Consensus 168 a~~~~~~~---------~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~ 233 (346)
T d1cm8a_ 168 ARQADSEM---------TGYVVTRWYRAPEVILNW-----MRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMK 233 (346)
T ss_dssp CEECCSSC---------CSSCSCGGGCCTHHHHTT-----TCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred eeccCCcc---------ccccccccccCHHHHcCC-----CCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHh
Confidence 98775421 122455689999998753 3567899999999999999999998853210 0
Q ss_pred -----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -----------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+++.+.+++++||..||.+|||+.++|+|+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp 302 (346)
T d1cm8a_ 234 VTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHP 302 (346)
T ss_dssp HHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred ccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcCh
Confidence 0123456678899999999999999999999998
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.8e-39 Score=346.21 Aligned_cols=235 Identities=17% Similarity=0.219 Sum_probs=189.6
Q ss_pred CCceecc-CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHh-cCCCCCeeeEeeeeEeccccc
Q 004025 19 LPYNIGD-PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLR-TVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 19 ~~Y~i~~-~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk-~LrHPnIlk~~d~~e~e~~~g 95 (778)
.+|.|.+ .||.|+ | +||+|+++.+|+.||||++... ..+++|+.++. .++||||++++++|++....
T Consensus 11 ~~y~i~~~~lG~G~fg--~Vy~a~~~~~~~~vAiK~i~~~-------~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~- 80 (335)
T d2ozaa1 11 DDYKVTSQVLGLGING--KVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAG- 80 (335)
T ss_dssp GTEEEEEEEEEECSSC--EEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT-
T ss_pred cCEEEeeEEeeeccCe--EEEEEEECCCCCEEEEEEECCc-------HHHHHHHHHHHHhcCCCCCCeEEEEEeecccC-
Confidence 3698865 599999 9 9999999999999999999742 35778998865 45899999999999863211
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC---CCcEEE
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ---TLDWKL 170 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~---~g~~KL 170 (778)
..++||||||| ++|.++|...+.. ...+..++.++.||+.||.|||+ .+|+||||||+||+++. .+.+||
T Consensus 81 ---~~~~~ivmEy~~gg~L~~~i~~~~~~-~l~e~~~~~i~~qi~~al~ylH~-~~iiHRDiKp~NIll~~~~~~~~~Kl 155 (335)
T d2ozaa1 81 ---RKCLLIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKL 155 (335)
T ss_dssp ---EEEEEEEEECCCSEEHHHHHHSCSCC-CEEHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEESCSSTTCCEEE
T ss_pred ---CCEEEEEEECCCCCcHHHHHHhcCCC-CcCHHHHHHHHHHHHHHHHHHHH-cCCccccccccccccccccccccccc
Confidence 35899999999 5899999865322 23455677889999999999996 99999999999999985 567999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh---
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--- 247 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~--- 247 (778)
+|||+++....... .....+++.|+|||++.+ ..++.++|+|||||++|+|++|.+||......
T Consensus 156 ~DFG~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~------~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~ 222 (335)
T d2ozaa1 156 TDFGFAKETTSHNS-------LTTPCYTPYYVAPEVLGP------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS 222 (335)
T ss_dssp CCCTTCEECCCCCC-------CCCCSCCCSSCCCCCCCG------GGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC---
T ss_pred cccceeeeccCCCc-------cccccCCcccCCcHHHcC------CCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHH
Confidence 99999987765321 122346679999999876 35778999999999999999999998643210
Q ss_pred -----cc------------CCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 -----NT------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 -----~~------------~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.+ ..+++.+.+++++||..||.+||++.++++|+
T Consensus 223 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp 273 (335)
T d2ozaa1 223 PGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 273 (335)
T ss_dssp -----CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSH
T ss_pred HHHHHHHhcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCH
Confidence 00 13566788999999999999999999999998
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-38 Score=340.46 Aligned_cols=244 Identities=19% Similarity=0.278 Sum_probs=186.2
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCC-CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC---CCCCeeeEeeeeEecc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDD-GSPVSIFSISGTNAQDGHLAAARNGVKRLRTV---RHPNILAFLHSTEVEN 92 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~-g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L---rHPnIlk~~d~~e~e~ 92 (778)
..+|++.++||.|+ | +||+|+++.+ ++.||||++......+.....+.+|+.+|+.| +||||+++++++....
T Consensus 6 ~~~Y~i~~~LG~G~fg--~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~ 83 (305)
T d1blxa_ 6 DQQYECVAEIGEGAYG--KVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 83 (305)
T ss_dssp GGTEEEEEEEEEETTE--EEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred cCCEEEEEEEecccCe--EEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccc
Confidence 35799999999998 8 9999999765 56799999975433332222345666665554 8999999999987532
Q ss_pred cccCCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEE
Q 004025 93 IDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~ 171 (778)
.+. ..++|++|||+ +.+..++...... ......++.++.||+.||.|||+ .+|+||||||+||+++.+|.+||+
T Consensus 84 ~~~---~~~~~~~~e~~~~~~~~~~~~~~~~-~~~~~~~~~~~~qi~~aL~yLH~-~~ivHrDiKp~NILi~~~~~~kl~ 158 (305)
T d1blxa_ 84 TDR---ETKLTLVFEHVDQDLTTYLDKVPEP-GVPTETIKDMMFQLLRGLDFLHS-HRVVHRDLKPQNILVTSSGQIKLA 158 (305)
T ss_dssp CSS---EEEEEEEEECCSCBHHHHHHHSCTT-CSCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEECTTCCEEEC
T ss_pred ccc---CceEEEEEEeccCCchhhhhhccCC-CCCHHHHHHHHHHHHHHHHHHHh-CCEEecCCCccEEEEcCCCCeeec
Confidence 211 35899999999 4454444433322 23345567789999999999996 899999999999999999999999
Q ss_pred ecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hh
Q 004025 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LR 247 (778)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~ 247 (778)
|||++....... ......++..|+|||++.+ ..++.++|||||||++|||++|.+||.... +.
T Consensus 159 dfg~~~~~~~~~-------~~~~~~gT~~Y~APE~~~~------~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~ 225 (305)
T d1blxa_ 159 DFGLARIYSFQM-------ALTSVVVTLWYRAPEVLLQ------SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLG 225 (305)
T ss_dssp SCCSCCCCCGGG-------GGCCCCCCCTTCCHHHHTT------CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred chhhhhhhcccc-------cCCCcccChhhcCcchhcC------CCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHH
Confidence 999987654321 1223356679999999876 467889999999999999999999985321 00
Q ss_pred c-----------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 N-----------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ~-----------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
. ...+++.+.+++.+||..||.+|||+.++|+||
T Consensus 226 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hp 294 (305)
T d1blxa_ 226 KILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHP 294 (305)
T ss_dssp HHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred HHHHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCh
Confidence 0 123456678899999999999999999999998
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-38 Score=331.38 Aligned_cols=236 Identities=13% Similarity=0.127 Sum_probs=190.1
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
..+|+++++||+|+ | +||+|+++ ++..||||++.+.... .+.+.+|++++++++||||+++++++.++
T Consensus 3 ~~~~~~~~~iG~G~fg--~Vy~~~~~-~~~~vAvK~l~~~~~~---~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~----- 71 (258)
T d1k2pa_ 3 PKDLTFLKELGTGQFG--VVKYGKWR-GQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQLYGVCTKQ----- 71 (258)
T ss_dssp CCCCCCCCCCCEETTE--EEEEEEET-TTEEEEEEEEESSSSC---HHHHHHHHHHHHTCCCTTBCCEEEEECCS-----
T ss_pred hHHCEEeEEEecCCCe--EEEEEEEC-CCCEEEEEEECcCcCC---HHHHHHHHHHHHhcCCCceeeEEEEEeeC-----
Confidence 35799999999999 8 99999986 7889999999875443 34688999999999999999999999764
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
..+|+||||+ ++|..++...... .....+..++.||++||.|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 72 ---~~~~iv~Ey~~~g~l~~~~~~~~~~--~~~~~~~~i~~qi~~gl~~LH~-~~iiH~dlk~~Nill~~~~~~kl~DfG 145 (258)
T d1k2pa_ 72 ---RPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLES-KQFLHRDLAARNCLVNDQGVVKVSDFG 145 (258)
T ss_dssp ---SSEEEEEECCTTEEHHHHHHSGGGC--CCHHHHHHHHHHHHHHHHHHHH-TTBCCSCCSGGGEEECTTCCEEECCCS
T ss_pred ---CceEEEEEccCCCcHHHhhhccccC--CcHHHHHHHHHHHHHHHHHHhh-cCcccccccceeEEEcCCCcEEECcch
Confidence 3799999999 5688887654322 2233455669999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh-------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL------- 246 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l------- 246 (778)
+++.+...... ......++..|+|||++.+ ..++.++|||||||++|||++ |..||.....
T Consensus 146 ~a~~~~~~~~~-----~~~~~~~t~~y~aPE~~~~------~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i 214 (258)
T d1k2pa_ 146 LSRYVLDDEYT-----SSVGSKFPVRWSPPEVLMY------SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI 214 (258)
T ss_dssp SCCBCSSSSCC-----CCCCSCCCGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHH
T ss_pred hheeccCCCce-----eecccCCCCCcCCcHHhcC------CCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHH
Confidence 99876543211 1112334558999999886 367789999999999999998 7888764221
Q ss_pred hc------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 RN------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 ~~------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. ...+|..+.+++.+||+.||.+|||+.++++|-
T Consensus 215 ~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 255 (258)
T d1k2pa_ 215 AQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNI 255 (258)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred HhCCCCCCcccccHHHHHHHHHHccCCHhHCcCHHHHHHHh
Confidence 11 134567789999999999999999999999863
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-38 Score=337.73 Aligned_cols=240 Identities=15% Similarity=0.136 Sum_probs=187.2
Q ss_pred CCCCceecc-CCCCCC-CceEEEEeEECCC--CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecc
Q 004025 17 KDLPYNIGD-PYPSAW-GSWSHFQGTSKDD--GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (778)
Q Consensus 17 ~~~~Y~i~~-~lg~g~-g~w~Vy~g~~k~~--g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~ 92 (778)
...+|.+.+ +||.|+ | +||+|+.+.+ +..||||++.... .....+.+.+|+++|++|+||||++++++++.+
T Consensus 6 ~~~~~~~~~~~iG~G~fg--~Vy~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~- 81 (285)
T d1u59a_ 6 KRDNLLIADIELGCGNFG--SVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE- 81 (285)
T ss_dssp CGGGEEEEEEEEECCTTE--EEEEEEEC---CCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESS-
T ss_pred cccCeEECCcEEecccCe--EEEEEEEecCCCcEEEEEEEEChhc-CHHHHHHHHHHHHHHHhCCCCCEeeEeeeeccC-
Confidence 345688888 599998 8 9999987654 4479999997643 334567789999999999999999999998753
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEE
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
.+||||||| ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||
T Consensus 82 --------~~~lvmE~~~~g~L~~~l~~~~~--~l~~~~~~~i~~qi~~gL~ylH~-~~iiHrDlKp~Nill~~~~~~Kl 150 (285)
T d1u59a_ 82 --------ALMLVMEMAGGGPLHKFLVGKRE--EIPVSNVAELLHQVSMGMKYLEE-KNFVHRDLAARNVLLVNRHYAKI 150 (285)
T ss_dssp --------SEEEEEECCTTEEHHHHHTTCTT--TSCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEEEETTEEEE
T ss_pred --------eEEEEEEeCCCCcHHHHhhcccc--CCCHHHHHHHHHHHHHHHHHHHh-CCeecCcCchhheeeccCCceee
Confidence 589999999 589998755331 12334456679999999999996 89999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh---
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL--- 246 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l--- 246 (778)
+|||+++.+........ ......++..|+|||++.++ .++.++|||||||++|||++ |..||.....
T Consensus 151 ~DFGla~~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~ 221 (285)
T d1u59a_ 151 SDFGLSKALGADDSYYT---ARSAGKWPLKWYAPECINFR------KFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV 221 (285)
T ss_dssp CCCTTCEECTTCSCEEC---CCCSSCCCGGGCCHHHHHHC------EECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHH
T ss_pred ccchhhhcccccccccc---cccccccCccccChHHHhCC------CCCccchhhcchHHHHHHHhCCCCCCCCCCHHHH
Confidence 99999988765321111 11122344589999998763 56789999999999999998 8888853211
Q ss_pred ----h------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 247 ----R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 247 ----~------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
. ....+|..+.+++.+||..||.+||++.++++.
T Consensus 222 ~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~ 265 (285)
T d1u59a_ 222 MAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQR 265 (285)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHHHHcCCCCCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 1 114567789999999999999999999988654
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.3e-38 Score=340.65 Aligned_cols=250 Identities=18% Similarity=0.285 Sum_probs=195.6
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
-+|++.++||.|+ | +||+|+++.+|+.||||++.+.. .....+.+.+|+.+|++|+||||+++++++..+....
T Consensus 8 ~rY~~~~~LG~G~fg--~Vy~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~-- 82 (345)
T d1pmea_ 8 PRYTNLSYIGEGAYG--MVCSAYDNVNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ-- 82 (345)
T ss_dssp TTEEEEEECC---CC--CEEEEEETTTCSEEEEEEECCTT-CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTT--
T ss_pred CCeEEEEEEeeccCe--EEEEEEECCCCcEEEEEEEehhc-ChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccc--
Confidence 3699999999999 9 89999999999999999997643 3445677899999999999999999999997643211
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
..++|+++|++ ++|.++++.... ....++.++.||+.||.|||+ ++|+||||||+||+++.+|.+||+|||++
T Consensus 83 -~~~~~l~~~~~~g~L~~~l~~~~l----~~~~i~~i~~qil~al~yLH~-~~iiHRDIKp~NILl~~~~~~kl~DfG~a 156 (345)
T d1pmea_ 83 -MKDVYLVTHLMGADLYKLLKTQHL----SNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKICDFGLA 156 (345)
T ss_dssp -CCCEEEEEECCCEEHHHHHHHCCC----CHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred -cceEEEEEeecCCchhhhhhcCCC----CHHHHHHHHHHHHHHHHHHHH-CCCcCCCCCcceEEECCCCCEEEcccCce
Confidence 23577777776 579999987543 355577889999999999996 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh---------
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~--------- 247 (778)
.......... .......++..|+|||++..+ ..++.++|+||+||++|+|++|.+||......
T Consensus 157 ~~~~~~~~~~---~~~~~~~gt~~y~aPE~l~~~-----~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~ 228 (345)
T d1pmea_ 157 RVADPDHDHT---GFLTEYVATRWYRAPEIMLNS-----KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 228 (345)
T ss_dssp EECCGGGCBC---CTTCCCCSCGGGCCGGGTTTB-----CSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred eeccCCCccc---eeeccccccceechHHHhhcC-----CCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhh
Confidence 8765432111 111223455689999998654 45678999999999999999999998532100
Q ss_pred ----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcccCCccccccc
Q 004025 248 ----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYF 291 (778)
Q Consensus 248 ----------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff 291 (778)
....++..+.+++.+||..||..||++.++|+|+ |+..++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hp----f~~~~~ 302 (345)
T d1pmea_ 229 LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP----YLEQYY 302 (345)
T ss_dssp HCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSG----GGTTTC
T ss_pred ccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCH----hhccCC
Confidence 0123445688999999999999999999999998 555443
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.4e-39 Score=345.33 Aligned_cols=243 Identities=17% Similarity=0.153 Sum_probs=189.0
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCC-----cEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeE
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGS-----PVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTE 89 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~-----~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e 89 (778)
+..+|++++.||.|+ | +||+|+++.+++ .|+||.+...... .....+.+|+++|+++ +||||++++++++
T Consensus 35 ~~~~~~l~~~lG~G~fG--~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~ 111 (325)
T d1rjba_ 35 PRENLEFGKVLGSGAFG--KVMNATAYGISKTGVSIQVAVKMLKEKADS-SEREALMSELKMMTQLGSHENIVNLLGACT 111 (325)
T ss_dssp CGGGEEEEEEEEECSSE--EEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred CHHHeEEeeEEeeCCCe--EEEEEEEcCCCcccceeEEEEEEeccccCH-HHHHHHHHHHHHHHHhcCCCcEeEEEEEEe
Confidence 334689999999998 8 999999876654 5999998754322 3345688999999998 8999999999998
Q ss_pred ecccccCCcccEEEEEecCC--cChHHHHHHhCcC--------------------CCcchHHHHHHHHHHHHHHHHHHcC
Q 004025 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLE--------------------GSQRDEYYAWGLNQIAKAVSFLNND 147 (778)
Q Consensus 90 ~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~--------------------~~~~~~~i~~gl~QI~~aL~fLH~~ 147 (778)
++ ..+||||||| ++|.++|+..... .......+..++.||+.||.|||+
T Consensus 112 ~~--------~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~- 182 (325)
T d1rjba_ 112 LS--------GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF- 182 (325)
T ss_dssp SS--------SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH-
T ss_pred eC--------CeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh-
Confidence 74 3799999999 5899999765311 112233456679999999999996
Q ss_pred CCccccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHH
Q 004025 148 CKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGL 227 (778)
Q Consensus 148 ~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSL 227 (778)
.+|+||||||+||+++.+|.+||+|||+++....... ........++..|+|||++.+ ..++.++|||||
T Consensus 183 ~~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~----~~~~~~~~gt~~y~aPE~l~~------~~~~~~~DiwS~ 252 (325)
T d1rjba_ 183 KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN----YVVRGNARLPVKWMAPESLFE------GIYTIKSDVWSY 252 (325)
T ss_dssp TTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTT----SEEETTEEECGGGCCHHHHHH------CCCCHHHHHHHH
T ss_pred CCeeeccCchhccccccCCeEEEeeccccccccCCCc----eeeeccccCCCccCChHHHcC------CCCCcceeccch
Confidence 8999999999999999999999999999987654321 111112334568999999876 367889999999
Q ss_pred HHHHHHHHh-CCCCCChhh----hh----c------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 228 GCLIYELFS-GMRLSKTEE----LR----N------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 228 G~liyel~t-g~~p~~~~~----l~----~------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
||++|||++ |.+||.... +. . ...+|+.+.+++.+||+.||.+|||+++++++-
T Consensus 253 Gvil~emlt~g~~Pf~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L 321 (325)
T d1rjba_ 253 GILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 321 (325)
T ss_dssp HHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred hHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 999999997 788885421 11 1 135677899999999999999999999999863
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.7e-38 Score=331.87 Aligned_cols=243 Identities=18% Similarity=0.236 Sum_probs=194.9
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.++||.|+ | +||+|+++.+|+.||||++......+.....+.+|+.+|+.++||||++++++++..
T Consensus 2 ~ry~~i~~LG~G~fg--~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~------ 73 (292)
T d1unla_ 2 QKYEKLEKIGEGTYG--TVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD------ 73 (292)
T ss_dssp CSEEEEEEEEECSSS--EEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECS------
T ss_pred CCCEeeeEEecCcCe--EEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccc------
Confidence 3699999999998 8 999999999999999999987766666778899999999999999999999999874
Q ss_pred cccEEEEEecCCc--ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEeccc
Q 004025 98 TKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (778)
Q Consensus 98 ~~~~lyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgl 175 (778)
..+|||+|++. .|..++...+. .....+..++.|++.||+|||+ .+|+||||||+||+++.++..||+|||.
T Consensus 74 --~~~~iv~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~q~~~aL~~lH~-~~IvHrDiKP~NIli~~~~~~kl~DFG~ 147 (292)
T d1unla_ 74 --KKLTLVFEFCDQDLKKYFDSCNGD---LDPEIVKSFLFQLLKGLGFCHS-RNVLHRDLKPQNLLINRNGELKLANFGL 147 (292)
T ss_dssp --SEEEEEEECCSEEHHHHHHHTTTC---CCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEECTTCCEEECCCTT
T ss_pred --cceeEEeeeccccccccccccccc---cchhHHHHHHHHHHHHHHHhhc-CCEeeecccCcccccccCCceeeeecch
Confidence 48999999993 45555554432 2344566779999999999996 9999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCC-Chhh----hhc--
Q 004025 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLS-KTEE----LRN-- 248 (778)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~-~~~~----l~~-- 248 (778)
+......... ......+..|+|||++.+. ..++.++|+|||||++|||++|+.|| .... +..
T Consensus 148 a~~~~~~~~~------~~~~~~~~~~~~pe~~~~~-----~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~ 216 (292)
T d1unla_ 148 ARAFGIPVRC------YSAEVVTLWYRPPDVLFGA-----KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIF 216 (292)
T ss_dssp CEECCSCCSC------CCSCCSCGGGCCHHHHTTC-----SCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHH
T ss_pred hhcccCCCcc------ceeeccccchhhhhHhccC-----CCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHH
Confidence 9887653211 1112334578999998764 34678999999999999999998764 2110 000
Q ss_pred -----------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcccCCcccccc
Q 004025 249 -----------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEY 290 (778)
Q Consensus 249 -----------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~f 290 (778)
...+++.+.+++++||..||++|||++++|+|+ |+++|
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp----~f~~~ 289 (292)
T d1unla_ 217 RLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHP----YFSDF 289 (292)
T ss_dssp HHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSG----GGSSC
T ss_pred hhcCCCChhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcCh----hhcCC
Confidence 012345677899999999999999999999998 66554
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-38 Score=340.39 Aligned_cols=251 Identities=17% Similarity=0.253 Sum_probs=186.9
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.++||+|+ | +||+|+++.+|+.||||++.+....+.....+.+|+++|++|+||||+++++.+.........
T Consensus 10 ~rY~i~~~LG~G~fg--~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~ 87 (318)
T d3blha1 10 SKYEKLAKIGQGTFG--EVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 87 (318)
T ss_dssp GGEEEEEEEEECSSS--EEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC-------
T ss_pred CCEEEEEEEecCcCe--EEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccc
Confidence 4799999999999 9 999999999999999999987655555566788999999999999999999998653211011
Q ss_pred cccEEEEEecCCc-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
...++|+|||||. .+...+.... .......++.++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|||++
T Consensus 88 ~~~~~~iv~e~~~~~~~~~~~~~~--~~~~~~~~~~i~~qil~~l~~lH~-~~ivHrDlKp~NILl~~~~~~kl~dfg~~ 164 (318)
T d3blha1 88 CKGSIYLVFDFCEHDLAGLLSNVL--VKFTLSEIKRVMQMLLNGLYYIHR-NKILHRDMKAANVLITRDGVLKLADFGLA 164 (318)
T ss_dssp ---CEEEEEECCCEEHHHHHTCTT--CCCCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEECTTSCEEECCCTTC
T ss_pred cCceEEEEEeccCCCccchhhhcc--cccccHHHHHHHHHHHHHHHHhcc-CCEEecCcCchheeecCCCcEEeeeccee
Confidence 1347999999994 4544443322 123344567789999999999996 99999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh----hc----
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN---- 248 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l----~~---- 248 (778)
..+......... ......++..|+|||++.+. ..++.++|+|||||++|||++|++||..... ..
T Consensus 165 ~~~~~~~~~~~~--~~~~~~gT~~Y~aPE~~~~~-----~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~ 237 (318)
T d3blha1 165 RAFSLAKNSQPN--RYTNRVVTLWYRPPELLLGE-----RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQL 237 (318)
T ss_dssp EECCC-----CC--CCCSCCSCGGGCCHHHHTTC-----SSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred eecccccccccc--cccceecCHHHhhHHHHcCC-----CCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHh
Confidence 877643221111 12223456699999998763 4577899999999999999999999863210 00
Q ss_pred cC-----------------------C-------------CCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 TA-----------------------S-------------IPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 ~~-----------------------~-------------iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. . ..+.+.+++.+||..||++|+|+.++|+|+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hp 306 (318)
T d3blha1 238 CGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD 306 (318)
T ss_dssp HCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred cCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcCh
Confidence 00 0 122346789999999999999999999998
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-38 Score=336.03 Aligned_cols=237 Identities=16% Similarity=0.179 Sum_probs=185.4
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
++..+|++.++||.|+ | +||+|+.+ ++..||||++...... .+.+.+|+++|++|+||||+++++++..+
T Consensus 10 i~~~~~~~~~~iG~G~fg--~Vy~~~~~-~~~~vAvK~~~~~~~~---~~~~~~E~~~l~~l~HpnIv~~~g~~~~~--- 80 (272)
T d1qpca_ 10 VPRETLKLVERLGAGQFG--EVWMGYYN-GHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVVTQE--- 80 (272)
T ss_dssp CCGGGEEEEEEEEEETTE--EEEEEEET-TTEEEEEEEECTTSSC---HHHHHHHHHHHHHCCCTTBCCEEEEECSS---
T ss_pred cCHHHeEEeEEEecCCCc--EEEEEEEC-CCCEEEEEEEccCcCC---HHHHHHHHHHHHhCCCCCEeEEEeeeccC---
Confidence 3455799999999998 8 99999986 5788999999764332 35689999999999999999999987542
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
.+||||||| ++|.+++....... .....+..++.||+.||.|||+ .+|+||||||+||+|+.+|.+||+|
T Consensus 81 ------~~~iv~Ey~~~g~L~~~~~~~~~~~-l~~~~~~~i~~qi~~gl~~lH~-~~ivHrDiKp~NIll~~~~~~Kl~D 152 (272)
T d1qpca_ 81 ------PIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEE-RNYIHRDLRAANILVSDTLSCKIAD 152 (272)
T ss_dssp ------SCEEEEECCTTCBHHHHTTSHHHHT-CCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECTTSCEEECC
T ss_pred ------CeEEEEEeCCCCcHHHHHhhcCCCC-CCHHHHHHHHHHHHHHHHHHHh-CCcccCccchhheeeecccceeecc
Confidence 579999999 57888765432111 1233455669999999999996 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCC-CCCChhh------
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM-RLSKTEE------ 245 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~-~p~~~~~------ 245 (778)
||+++.+...... ......++..|+|||++.++ .++.++|||||||++|||++|+ +++....
T Consensus 153 FGla~~~~~~~~~-----~~~~~~gt~~y~APE~~~~~------~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~ 221 (272)
T d1qpca_ 153 FGLARLIEDNEYT-----AREGAKFPIKWTAPEAINYG------TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 221 (272)
T ss_dssp CTTCEECSSSCEE-----CCTTCCCCTTTSCHHHHHHC------EECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHH
T ss_pred ccceEEccCCccc-----cccccCCcccccChHHHhCC------CCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 9999887643211 11122345589999998763 4678999999999999999965 4443211
Q ss_pred -hh------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 246 -LR------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 246 -l~------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
+. ....+|+.+.+++++||+.||.+|||+.++++.
T Consensus 222 ~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~ 263 (272)
T d1qpca_ 222 NLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSV 263 (272)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHhcCCCCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 11 113577889999999999999999999999873
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-38 Score=331.78 Aligned_cols=240 Identities=16% Similarity=0.179 Sum_probs=180.0
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCC---CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEec
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDG---SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g---~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e 91 (778)
++..+|++++.||.|+ | +||+|+++.++ ..|+||.+... ..+...+.+.+|+++|++++||||+++++++.+
T Consensus 4 i~~~~~~l~~~iG~G~fg--~Vy~a~~~~~~~~~~~vaik~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~- 79 (273)
T d1mp8a_ 4 IQRERIELGRCIGEGQFG--DVHQGIYMSPENPALAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVITE- 79 (273)
T ss_dssp CCGGGEEEEEEEEECSSS--EEEEEEECCC--CCEEEEEEECTTT-TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-
T ss_pred cCHHHeEEEEEEeeCCCc--EEEEEEEecCCceeEEEEEEEeccc-cCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 3445799999999999 9 99999987654 35888887643 334456779999999999999999999999863
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEE
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~K 169 (778)
..+||||||| ++|..++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+|
T Consensus 80 --------~~~~iv~E~~~~g~l~~~~~~~~~--~l~~~~~~~~~~qi~~gl~ylH~-~~iiHrDlKp~NIll~~~~~~K 148 (273)
T d1mp8a_ 80 --------NPVWIIMELCTLGELRSFLQVRKY--SLDLASLILYAYQLSTALAYLES-KRFVHRDIAARNVLVSSNDCVK 148 (273)
T ss_dssp --------SSCEEEEECCTTEEHHHHHHHTTT--TSCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEEEETTEEE
T ss_pred --------CeEEEEEEeccCCcHHhhhhccCC--CCCHHHHHHHHHHHHHHhhhhcc-cCeeccccchhheeecCCCcEE
Confidence 2689999999 568887765432 12344466679999999999996 9999999999999999999999
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh-
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR- 247 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~- 247 (778)
|+|||+++.+..... .......++..|+|||++.+ ..++.++|+|||||++|||++ |.+||......
T Consensus 149 l~DfG~a~~~~~~~~-----~~~~~~~gt~~y~apE~l~~------~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~ 217 (273)
T d1mp8a_ 149 LGDFGLSRYMEDSTY-----YKASKGKLPIKWMAPESINF------RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 217 (273)
T ss_dssp ECC------------------------CCGGGCCHHHHHH------CCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG
T ss_pred EccchhheeccCCcc-----eeccceecCcccchhhHhcc------CCCCCccccccchHHHHHHHhcCCCCCCCCCHHH
Confidence 999999987654221 11122234458999999876 367789999999999999998 77887543211
Q ss_pred ------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 248 ------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 248 ------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
....+|..+.+++.+||+.||.+|||+.+++++-
T Consensus 218 ~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L 263 (273)
T d1mp8a_ 218 VIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 263 (273)
T ss_dssp HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHH
Confidence 1235777899999999999999999999998763
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.6e-38 Score=330.44 Aligned_cols=242 Identities=15% Similarity=0.173 Sum_probs=180.3
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCC----CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEe
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDG----SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g----~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~ 90 (778)
+....|++++.||.|+ | +||+|+.+.++ ..||||++.... .+.....+.+|+++|++|+||||+++++++.+
T Consensus 4 i~~~~~~~~~~iG~G~fG--~Vy~~~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~ 80 (283)
T d1mqba_ 4 IHPSCVTRQKVIGAGEFG--EVYKGMLKTSSGKKEVPVAIKTLKAGY-TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK 80 (283)
T ss_dssp CCTTTEEEEEEEEECSSS--EEEEEEEEC---CCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred CCHHHeEeeeEEeeCCCe--EEEEEEEeCCCCEEEEEEEEEEECccc-ChHHHHHHHHHHHHHHhcCCCCEeeeeEEEec
Confidence 4445799999999999 9 99999988665 369999997643 33445678899999999999999999999976
Q ss_pred cccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcE
Q 004025 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDW 168 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~ 168 (778)
+ ..+|+||||| +.|.+++...... .....+..++.||+.||.|||+ .+|+||||||+||+|+.+|.+
T Consensus 81 ~--------~~~~~v~e~~~~~~l~~~~~~~~~~--~~~~~~~~i~~~i~~gl~~lH~-~~iiHrDlKp~NILl~~~~~~ 149 (283)
T d1mqba_ 81 Y--------KPMMIITEYMENGALDKFLREKDGE--FSVLQLVGMLRGIAAGMKYLAN-MNYVHRDLAARNILVNSNLVC 149 (283)
T ss_dssp S--------SSEEEEEECCTTEEHHHHHHHTTTC--SCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEECTTCCE
T ss_pred C--------CceEEEEEecccCcchhhhhccccc--ccHHHHHHHHHHHHHhhhhccc-cccccCccccceEEECCCCeE
Confidence 3 3789999999 3577766654321 2233455679999999999996 999999999999999999999
Q ss_pred EEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCC-CChh---
Q 004025 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL-SKTE--- 244 (778)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p-~~~~--- 244 (778)
||+|||+++.+...... ........++..|+|||++.+ ..++.++|||||||++|||++|+.+ +...
T Consensus 150 Kl~DFGla~~~~~~~~~---~~~~~~~~gt~~Y~APE~l~~------~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~ 220 (283)
T d1mqba_ 150 KVSDFGLSRVLEDDPEA---TYTTSGGKIPIRWTAPEAISY------RKFTSASDVWSFGIVMWEVMTYGERPYWELSNH 220 (283)
T ss_dssp EECCCCC--------------------CCCGGGSCHHHHHS------CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH
T ss_pred EEcccchhhcccCCCcc---ceEeccCCCCccccCHHHHcc------CCCCCcccccccHHHHHHHHhCCCCccccCCHH
Confidence 99999999877543211 111112234558999999876 3678899999999999999996544 3321
Q ss_pred hh----h------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 245 EL----R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 245 ~l----~------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
++ . ....+|..+.+++.+||+.||.+||++.++++.
T Consensus 221 ~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~ 266 (283)
T d1mqba_ 221 EVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSI 266 (283)
T ss_dssp HHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred HHHHHHhccCCCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHH
Confidence 11 1 113467779999999999999999999998764
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-38 Score=335.05 Aligned_cols=235 Identities=14% Similarity=0.163 Sum_probs=181.7
Q ss_pred ceecc-CCCCCC-CceEEEEeEECC--CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccC
Q 004025 21 YNIGD-PYPSAW-GSWSHFQGTSKD--DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (778)
Q Consensus 21 Y~i~~-~lg~g~-g~w~Vy~g~~k~--~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~ 96 (778)
+.+.+ +||+|+ | +||+|+.+. +++.||||++..........+.+.+|+++|++|+||||++++++++.+
T Consensus 8 ~~le~k~iG~G~fG--~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~----- 80 (277)
T d1xbba_ 8 LTLEDKELGSGNFG--TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE----- 80 (277)
T ss_dssp EEEEEEEEEECSSE--EEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESS-----
T ss_pred CeecCCCcccCCCe--EEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccC-----
Confidence 34443 699998 8 999998653 457899999976544445567899999999999999999999998753
Q ss_pred CcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecc
Q 004025 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (778)
Q Consensus 97 ~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFg 174 (778)
.+||||||| ++|.+++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 81 ----~~~lvmE~~~~g~L~~~l~~~~~l---~~~~~~~i~~qi~~gl~ylH~-~~iiHrDlKp~Nill~~~~~~kl~DFG 152 (277)
T d1xbba_ 81 ----SWMLVMEMAELGPLNKYLQQNRHV---KDKNIIELVHQVSMGMKYLEE-SNFVHRDLAARNVLLVTQHYAKISDFG 152 (277)
T ss_dssp ----SEEEEEECCTTEEHHHHHHHCTTC---CHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEEEETTEEEECCCT
T ss_pred ----CEEEEEEcCCCCcHHHHHhhccCC---CHHHHHHHHHHHHHHHhhHHh-CCcccCCCcchhhcccccCcccccchh
Confidence 478999999 5799998875432 234456669999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhh-------
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL------- 246 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l------- 246 (778)
+++.+....... .......++..|+|||++.+. .++.++|||||||++|||++ |.+||.....
T Consensus 153 la~~~~~~~~~~---~~~~~~~gt~~y~APE~l~~~------~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i 223 (277)
T d1xbba_ 153 LSKALRADENYY---KAQTHGKWPVKWYAPECINYY------KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 223 (277)
T ss_dssp TCEECCTTCSEE---EC----CCCGGGCCHHHHHHC------EEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH
T ss_pred hhhhcccccccc---ccccccCCCceecCchhhcCC------CCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHH
Confidence 998775432110 011122345589999998763 46779999999999999997 7888864211
Q ss_pred hc------cCCCCcchHHHHHHHhccCCCCCCChHHHHh
Q 004025 247 RN------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 247 ~~------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
.. ...+|..+.+++.+||+.||.+||+++++++
T Consensus 224 ~~~~~~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~ 262 (277)
T d1xbba_ 224 EKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL 262 (277)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HcCCCCCCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 11 1356778999999999999999999999865
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-37 Score=338.07 Aligned_cols=240 Identities=17% Similarity=0.250 Sum_probs=188.6
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
..|+..+.||.|+ | +||+|+++.+|+.||||++.+... ...+|+++|++|+||||+++++++...... .
T Consensus 20 ~~Y~~~k~LG~G~fg--~Vy~a~~~~~~~~vAiK~i~~~~~------~~~~Ei~il~~l~h~niv~~~~~~~~~~~~--~ 89 (350)
T d1q5ka_ 20 VSYTDTKVIGNGSFG--VVYQAKLCDSGELVAIKKVLQDKR------FKNRELQIMRKLDHCNIVRLRYFFYSSGEK--K 89 (350)
T ss_dssp EEEEEEEEEEEETTE--EEEEEEETTTCCEEEEEEEECCSS------SCCHHHHHHHHCCCTTBCCEEEEEEEC--C--C
T ss_pred CCcEeeeEEeeCcCe--EEEEEEECCCCCEEEEEEECccch------HHHHHHHHHHhcCCCCCCcEEEEEEecCcc--C
Confidence 4699999999998 8 999999999999999999986432 234799999999999999999998643211 0
Q ss_pred cccEEEEEecCCc-ChHHHHHHhC-cCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC-cEEEEecc
Q 004025 98 TKITIYIVTEPVM-PLSEKIKELG-LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-DWKLHAFD 174 (778)
Q Consensus 98 ~~~~lyIVtE~v~-~L~~~L~~~~-~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g-~~KL~dFg 174 (778)
...++|||||||. .+...+.... .........++.+++||+.||+|||+ ++|+||||||+||+++.+| .+||+|||
T Consensus 90 ~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~-~~IiHrDiKp~NILl~~~~~~~kl~DFG 168 (350)
T d1q5ka_ 90 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFG 168 (350)
T ss_dssp SCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT-TTEECCCCCGGGEEECTTTCCEEECCCT
T ss_pred CceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHh-cCCcccCCCcceEEEecCCCceeEeccc
Confidence 1458999999994 5655554322 12223345577789999999999995 9999999999999999775 89999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----hhc--
Q 004025 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRN-- 248 (778)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~----l~~-- 248 (778)
++..+..... .....++..|+|||.+.+. ..++.++|||||||++|||++|.+||.... +..
T Consensus 169 ~a~~~~~~~~-------~~~~~gt~~y~aPE~~~~~-----~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~ 236 (350)
T d1q5ka_ 169 SAKQLVRGEP-------NVSYICSRYYRAPELIFGA-----TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 236 (350)
T ss_dssp TCEECCTTSC-------CCSCCSCTTSCCHHHHTTC-----SSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHH
T ss_pred chhhccCCcc-------cccccccccccChHHhhcc-----cCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHH
Confidence 9987754321 1223566799999987753 467889999999999999999999985321 000
Q ss_pred -----------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -----------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -----------------------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+++.+.+++.+||..||.+|||+.++|+|+
T Consensus 237 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp 304 (350)
T d1q5ka_ 237 KVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 304 (350)
T ss_dssp HHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred HHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCH
Confidence 013456788999999999999999999999998
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-37 Score=334.63 Aligned_cols=240 Identities=16% Similarity=0.192 Sum_probs=184.2
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCC----cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEec
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGS----PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~----~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e 91 (778)
+..+|++.+.||.|+ | +||+|+++.+|+ .|+||.+.... .....+.+.+|+++|++|+||||+++++++.++
T Consensus 7 k~~dy~~~~~lG~G~fG--~Vy~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~ 83 (317)
T d1xkka_ 7 KETEFKKIKVLGSGAFG--TVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTS 83 (317)
T ss_dssp CTTTEEEEEEEEECSSE--EEEEEEECC----CCEEEEEEEECC-----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred CHHHCEEeeEEecCCCe--EEEEEEEcCCCCEEEEEEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence 345799999999999 8 999999998887 57888776432 223456789999999999999999999999753
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEE
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~K 169 (778)
..|+++|++ ++|.+++...... .....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+|
T Consensus 84 ---------~~~~v~e~~~~~~l~~~~~~~~~~--~~~~~~~~i~~qi~~gl~yLH~-~~iiHrDlKp~NIll~~~~~~k 151 (317)
T d1xkka_ 84 ---------TVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNYLED-RRLVHRDLAARNVLVKTPQHVK 151 (317)
T ss_dssp ---------SEEEEEECCTTCBHHHHHHHTSSS--CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEEEETTEEE
T ss_pred ---------CeeEEEEeccCCcccccccccccC--CCHHHHHHHHHHHHHHHHHHHH-cCcccCcchhhcceeCCCCCeE
Confidence 467778887 5788877765422 2234455669999999999996 8999999999999999999999
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhhc
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELRN 248 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~~ 248 (778)
|+|||+++.+...... .......++..|+|||++.+ ..++.++|||||||++|||++ |.+||.......
T Consensus 152 l~DFGla~~~~~~~~~----~~~~~~~gt~~y~APE~l~~------~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~ 221 (317)
T d1xkka_ 152 ITDFGLAKLLGAEEKE----YHAEGGKVPIKWMALESILH------RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 221 (317)
T ss_dssp ECCCSHHHHTTTTCC------------CCTTTSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGG
T ss_pred eeccccceeccccccc----ccccccccCccccChHHHhc------CCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHH
Confidence 9999999887543211 11122245569999999876 367889999999999999998 677776422111
Q ss_pred -------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 249 -------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 249 -------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
...+|..+.+++.+||+.||.+||++.+++++.
T Consensus 222 ~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l 267 (317)
T d1xkka_ 222 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEF 267 (317)
T ss_dssp HHHHHHHTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHHHcCCCCCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHH
Confidence 134667789999999999999999999999874
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.6e-37 Score=333.87 Aligned_cols=246 Identities=17% Similarity=0.247 Sum_probs=189.3
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.++||.|+ | +||+|+++.+|+.||||++.+..........+.+|+.+|+.++||||+++++++..+... .
T Consensus 17 ~~Y~i~~~LG~G~fg--~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~--~ 92 (355)
T d2b1pa1 17 KRYQNLKPIGSGAQG--IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL--E 92 (355)
T ss_dssp TTEEEEEECSCC--C--EEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCST--T
T ss_pred CCeEEEEEeecCcCe--EEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEeccccc--c
Confidence 4699999999999 9 999999999999999999998766666677899999999999999999999999754210 1
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
...++||||||| +.|...+.. ......++.++.||+.||.|||+ .+|+||||||+||+++.++.+|++|||++
T Consensus 93 ~~~~~~iv~Ey~~~~l~~~~~~-----~~~~~~i~~~~~qil~gl~~LH~-~giiHrDlKP~Nil~~~~~~~kl~df~~~ 166 (355)
T d2b1pa1 93 EFQDVYLVMELMDANLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLA 166 (355)
T ss_dssp TCCEEEEEEECCSEEHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEECTTCCEEECCCCC-
T ss_pred cCceeEEEEeccchHHHHhhhc-----CCCHHHHHHHHHHHHHHHHHhhh-cccccccCCccccccccccceeeechhhh
Confidence 146999999999 456655532 12345577789999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh---------
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~--------- 247 (778)
+...... ......++..|+|||++.+ ..++.++||||+||++|+|++|.+||......
T Consensus 167 ~~~~~~~-------~~~~~~~t~~y~aPE~l~~------~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~ 233 (355)
T d2b1pa1 167 RTAGTSF-------MMTPYVVTRYYRAPEVILG------MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 233 (355)
T ss_dssp ---------------------CCTTCCHHHHTT------CCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred hcccccc-------ccccccccccccChhhhcC------CCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHh
Confidence 7665421 1222345679999999987 46778999999999999999999998532100
Q ss_pred ---------------------cc---C---------------------CCCcchHHHHHHHhccCCCCCCChHHHHhccc
Q 004025 248 ---------------------NT---A---------------------SIPKSLLPDYQRLLSSMPSRRLNSSKLIENSV 282 (778)
Q Consensus 248 ---------------------~~---~---------------------~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~ 282 (778)
.. . .++..+.+++++||..||.+|||++++|+||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hp- 312 (355)
T d2b1pa1 234 LGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP- 312 (355)
T ss_dssp HCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTST-
T ss_pred ccCCCHHHHHHhhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCc-
Confidence 00 0 0123457789999999999999999999999
Q ss_pred CCccccccc
Q 004025 283 GDFWMTEYF 291 (778)
Q Consensus 283 ~~~w~~~ff 291 (778)
|++.++
T Consensus 313 ---w~~~~~ 318 (355)
T d2b1pa1 313 ---YINVWY 318 (355)
T ss_dssp ---TTGGGC
T ss_pred ---ccCCCC
Confidence 665544
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=2.4e-37 Score=333.83 Aligned_cols=232 Identities=16% Similarity=0.227 Sum_probs=186.3
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEeccccc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDA 95 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~g 95 (778)
..+|++.++||.|+ | +||+|+++.+|+.||||++... ..+.+.+|+.+|+.|+ ||||++++++++...
T Consensus 34 ~d~y~i~~~LG~G~fg--~V~~a~~~~~~~~vAiK~i~~~-----~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~--- 103 (328)
T d3bqca1 34 QDDYQLVRKLGRGKYS--EVFEAINITNNEKVVVKILKPV-----KKKKIKREIKILENLRGGPNIITLADIVKDPV--- 103 (328)
T ss_dssp GGGEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEECSS-----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTT---
T ss_pred CcCeEEEEEEecCcCe--EEEEEEECCCCCEEEEEEECHH-----HHHHHHHHHHHHHhccCCCCCcEEEEEEEecC---
Confidence 34699999999998 8 9999999999999999999753 2346889999999996 999999999998654
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCC-cEEEEe
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-DWKLHA 172 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g-~~KL~d 172 (778)
..++|+||||| ++|..+.+ ......++.++.||+.||.|||+ .+|+||||||+||+|+.++ .+||+|
T Consensus 104 ---~~~~~~v~e~~~~~~L~~~~~------~l~e~~i~~i~~qil~aL~~LH~-~gIvHrDiKp~NILi~~~~~~vkl~D 173 (328)
T d3bqca1 104 ---SRTPALVFEHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCHS-MGIMHRDVKPHNVMIDHEHRKLRLID 173 (328)
T ss_dssp ---TCSEEEEEECCCSCBGGGTTT------SCCHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEEETTTTEEEECC
T ss_pred ---CCceeEEEeecCCCcHHHHhc------CCCHHHHHHHHHHHHHHHHHHhh-cccccccccccceEEcCCCCeeeecc
Confidence 34799999999 35655432 13355577889999999999996 9999999999999998655 699999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-----h-
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-----L- 246 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-----l- 246 (778)
||++........ .....++..|+|||.+.+. ..++.++|+|||||++|||++|+.||.... .
T Consensus 174 FG~a~~~~~~~~-------~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~ 241 (328)
T d3bqca1 174 WGLAEFYHPGQE-------YNVRVASRYFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 241 (328)
T ss_dssp GGGCEECCTTCC-------CCSCCSCGGGCCHHHHTTC-----CCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHH
T ss_pred cccceeccCCCc-------ccccccCccccCcccccCC-----CCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHH
Confidence 999987764321 1122445689999998764 456889999999999999999998874210 0
Q ss_pred --------------------------hc------------------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 247 --------------------------RN------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 247 --------------------------~~------------------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.. ...+++.+.+++++||..||.+|||++++|+|+
T Consensus 242 ~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp 320 (328)
T d3bqca1 242 RIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 320 (328)
T ss_dssp HHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred HHHHHHCCchhhhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCc
Confidence 00 012445678899999999999999999999998
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-37 Score=324.35 Aligned_cols=232 Identities=18% Similarity=0.230 Sum_probs=179.0
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEeccccc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g 95 (778)
...+|++++.||.|+ | +||+|+.+ |..||||+++++. ..+.+++|+++|++|+||||+++++++..+
T Consensus 5 ~~~~~~~~~~lG~G~fg--~Vy~~~~~--~~~vAvK~i~~~~----~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~---- 72 (262)
T d1byga_ 5 NMKELKLLQTIGKGEFG--DVMLGDYR--GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEE---- 72 (262)
T ss_dssp CGGGEEEEEEEEECSSC--EEEEEEET--TEEEEEEECCCCC------HHHHHTHHHHTTCCCTTBCCEEEEECCC----
T ss_pred CHHHeEEeEEEecCCCe--EEEEEEEC--CeEEEEEEECcHH----HHHHHHHHHHHHHhCCCCCEeeEEEEEEec----
Confidence 445799999999999 9 99999985 7799999997542 345688999999999999999999987532
Q ss_pred CCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEec
Q 004025 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (778)
Q Consensus 96 ~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dF 173 (778)
...+||||||+ ++|.++|....... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+||
T Consensus 73 ---~~~~~lv~ey~~~g~L~~~l~~~~~~~-l~~~~~~~i~~~i~~al~ylH~-~~ivH~dlkp~Nil~~~~~~~kl~df 147 (262)
T d1byga_ 73 ---KGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEG-NNFVHRDLAARNVLVSEDNVAKVSDF 147 (262)
T ss_dssp -----CCEEEECCCTTEEHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEECTTSCEEECCC
T ss_pred ---CCcEEEEEeccCCCCHHHHHHhcCCCC-CCHHHHHHHHHHHHhhcccccc-CceeccccchHhheecCCCCEeeccc
Confidence 23689999999 57999987643211 1233345569999999999996 89999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhhc----
Q 004025 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELRN---- 248 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~~---- 248 (778)
|+++....... ....+..|+|||++.+ ..++.++|||||||++|||++ |.+|+......+
T Consensus 148 g~s~~~~~~~~---------~~~~~~~y~aPE~l~~------~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~ 212 (262)
T d1byga_ 148 GLTKEASSTQD---------TGKLPVKWTAPEALRE------KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR 212 (262)
T ss_dssp CC---------------------CCTTTSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHH
T ss_pred ccceecCCCCc---------cccccccCCChHHHhC------CCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHH
Confidence 99987654211 1234558999999876 357789999999999999998 677765422111
Q ss_pred ---------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 249 ---------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 249 ---------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
...+|+.+.+++.+||..||.+|||+.+++++
T Consensus 213 i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~ 253 (262)
T d1byga_ 213 VEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ 253 (262)
T ss_dssp HTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHcCCCCCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence 13466789999999999999999999999875
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.4e-37 Score=335.09 Aligned_cols=246 Identities=16% Similarity=0.267 Sum_probs=192.7
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++.++||.|+ | +||+|+++.+|+.||||++.+........+.+.+|+++|++|+||||+++++++...... .
T Consensus 18 ~rY~i~~~LG~G~fg--~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~--~ 93 (348)
T d2gfsa1 18 ERYQNLSPVGSGAYG--SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSL--E 93 (348)
T ss_dssp TTEEEEEECGGGTTS--SEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSST--T
T ss_pred CCeEEEEEEecCCCe--EEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeecccc--c
Confidence 4699999999999 9 899999999999999999987666556677889999999999999999999998643210 0
Q ss_pred cccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEecccc
Q 004025 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (778)
Q Consensus 98 ~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~dFgla 176 (778)
....+|+++|++ ++|.+++.... .....++.++.||+.||.|||+ ++|+||||||+||+++.+|..||+|||++
T Consensus 94 ~~~~~~i~~~~~gg~L~~~~~~~~----l~e~~~~~i~~qil~aL~~LH~-~giiHrDiKp~NILi~~~~~~kl~dfg~a 168 (348)
T d2gfsa1 94 EFNDVYLVTHLMGADLNNIVKCQK----LTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLA 168 (348)
T ss_dssp TCCCCEEEEECCSEEHHHHHTTCC----CCHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEECTTCCEEECCC---
T ss_pred cCceEEEEEeecCCchhhhccccc----ccHHHHHHHHHHHHHHHHHHHh-CCCcccccCCccccccccccccccccchh
Confidence 023566666655 57999886543 2345577789999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh---------
Q 004025 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------- 247 (778)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~--------- 247 (778)
...... .....++..|+|||+..+. ..++.++|+|||||++|+|++|.+||......
T Consensus 169 ~~~~~~---------~~~~~g~~~y~apE~~~~~-----~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~ 234 (348)
T d2gfsa1 169 RHTDDE---------MTGYVATRWYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 234 (348)
T ss_dssp -CCTGG---------GSSSCHHHHTSCHHHHTTC-----SCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred cccCcc---------cccccccccccCchhhcCC-----ccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 765432 1122344589999987653 35678999999999999999999998532100
Q ss_pred ----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcccCCccccccc
Q 004025 248 ----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSVGDFWMTEYF 291 (778)
Q Consensus 248 ----------------------------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~~~~~w~~~ff 291 (778)
....++..+.+++++||..||.+|||+.++|+|+ |++.+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp----~f~~~~ 308 (348)
T d2gfsa1 235 VGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA----YFAQYH 308 (348)
T ss_dssp HCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG----GGTTTC
T ss_pred cCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCH----hhCCCC
Confidence 0123566788899999999999999999999999 665543
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-37 Score=325.70 Aligned_cols=239 Identities=13% Similarity=0.178 Sum_probs=179.2
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCC-C--CcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDD-G--SPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~-g--~~VaIK~~~~~~~~-~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~ 92 (778)
..+|++.++||.|+ | +||+|+.+.+ + ..||||++.+.... +...+.+.+|+++|++|+||||++++++++++
T Consensus 7 ~~d~~~~~~iG~G~fg--~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~- 83 (273)
T d1u46a_ 7 EKDLRLLEKLGDGSFG--VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP- 83 (273)
T ss_dssp GGGEEEEEECC----C--CCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS-
T ss_pred hHHeEEEEEEecCCCe--EEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeec-
Confidence 35699999999999 9 8999987543 3 36899998765332 24567789999999999999999999999752
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEE
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
.+|+||||| ++|.+++...... .....+..++.||+.||.|||+ .+|+||||||+||+++.++.+||
T Consensus 84 --------~~~lv~e~~~~~~l~~~~~~~~~~--l~~~~~~~~~~qi~~gl~ylH~-~~iiHrDikp~NIll~~~~~vkl 152 (273)
T d1u46a_ 84 --------PMKMVTELAPLGSLLDRLRKHQGH--FLLGTLSRYAVQVAEGMGYLES-KRFIHRDLAARNLLLATRDLVKI 152 (273)
T ss_dssp --------SCEEEEECCTTCBHHHHHHHHGGG--SCHHHHHHHHHHHHHHHHHHHH-TTEECSCCCGGGEEEEETTEEEE
T ss_pred --------chheeeeeecCcchhhhhhcccCC--CCHHHHHHHHHHHHHHHHHhhh-CCEeeeeecHHHhccccccceee
Confidence 579999999 5787776654321 2334456679999999999996 89999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh-CCCCCChhhhh--
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR-- 247 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t-g~~p~~~~~l~-- 247 (778)
+|||+++.+....... .......++..|+|||++.+. .++.++|+|||||++|||++ |.+||......
T Consensus 153 ~DfGl~~~~~~~~~~~---~~~~~~~~~~~~~aPE~~~~~------~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~ 223 (273)
T d1u46a_ 153 GDFGLMRALPQNDDHY---VMQEHRKVPFAWCAPESLKTR------TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI 223 (273)
T ss_dssp CCCTTCEECCC-CCEE---EC-----CCGGGCCHHHHHHC------EEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH
T ss_pred ccchhhhhcccCCCcc---eecCccccCcccCCHHHHhCC------CCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHH
Confidence 9999999876532211 111111234489999999873 56778999999999999997 78888542111
Q ss_pred ------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHh
Q 004025 248 ------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 248 ------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
....+|..+.+++.+||+.||++|||+.++++
T Consensus 224 ~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~ 267 (273)
T d1u46a_ 224 LHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD 267 (273)
T ss_dssp HHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHhCCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 12457788999999999999999999998864
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-37 Score=326.48 Aligned_cols=236 Identities=19% Similarity=0.184 Sum_probs=180.6
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccc
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~ 94 (778)
+...+|++++.||+|+ | +||+|+++.+ ..||||++...... .+.+.+|+.+|++++||||+++++++..+
T Consensus 14 i~~~~~~i~~~iG~G~fg--~Vy~~~~~~~-~~vAiK~l~~~~~~---~~~~~~E~~~l~~l~h~nIv~~~g~~~~~--- 84 (285)
T d1fmka3 14 IPRESLRLEVKLGQGCFG--EVWMGTWNGT-TRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSEE--- 84 (285)
T ss_dssp CCGGGEEEEEEEEECSSC--EEEEEEETTT-EEEEEEECCTTSSC---HHHHHHHHHHHHHCCCTTBCCEEEEECSS---
T ss_pred cCHHHEEEeeEEeeCCCe--EEEEEEECCC-CEEEEEEECcccCC---HHHHHHHHHHHHhcccCCEeEEEEEEecC---
Confidence 4556799999999999 9 9999998754 57999999754332 35688999999999999999999988532
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEEEe
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL~d 172 (778)
.+|+||||| ++|..++....... .....+..++.||+.||+|||+ .+++||||||+||+|+.+|.+||+|
T Consensus 85 ------~~~lv~Ey~~~g~l~~~~~~~~~~~-l~~~~~~~i~~~i~~gl~~LH~-~~ivH~DlKp~NIll~~~~~~kl~D 156 (285)
T d1fmka3 85 ------PIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER-MNYVHRDLRAANILVGENLVCKVAD 156 (285)
T ss_dssp ------SCEEEECCCTTCBHHHHHSHHHHTT-CCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEECGGGCEEECC
T ss_pred ------CeEEEEEecCCCchhhhhhhccccc-chHHHHHHHHHHHHHHHHHHhh-hheecccccceEEEECCCCcEEEcc
Confidence 579999999 56887775532211 2234456679999999999996 8999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCC-CChhh----h-
Q 004025 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL-SKTEE----L- 246 (778)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p-~~~~~----l- 246 (778)
||+++.+..... .......++..|+|||++.+ ..++.++|||||||++|||++|+.+ +.... +
T Consensus 157 fGla~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~------~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~ 225 (285)
T d1fmka3 157 FGLARLIEDNEY-----TARQGAKFPIKWTAPEAALY------GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD 225 (285)
T ss_dssp CCTTC-------------------CCGGGSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHH
T ss_pred cchhhhccCCCc-----eeeccccccccccChHHHhC------CCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 999987654211 11122334568999999876 3677899999999999999996544 33211 1
Q ss_pred --h------ccCCCCcchHHHHHHHhccCCCCCCChHHHHh
Q 004025 247 --R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 247 --~------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
. ....+|+.+.+++.+||+.||.+||+++++++
T Consensus 226 ~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~ 266 (285)
T d1fmka3 226 QVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 266 (285)
T ss_dssp HHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhcCCCCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence 1 12456778999999999999999999999876
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=5.3e-37 Score=327.56 Aligned_cols=241 Identities=15% Similarity=0.137 Sum_probs=189.1
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECC-----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEe
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKD-----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~-----~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~ 90 (778)
+..+|++.++||.|+ | +||+|+.+. +++.||||++.... .....+.+.+|+.+|++|+||||+++++++..
T Consensus 11 p~~~~~~~~~lG~G~fG--~Vy~a~~~~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~ 87 (301)
T d1lufa_ 11 PRNNIEYVRDIGEGAFG--RVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDNPNIVKLLGVCAV 87 (301)
T ss_dssp CGGGCEEEEEEEECSSC--EEEEEEEETSSTTSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred CHHHcEEeEEEeeCCCe--EEEEEEECCCccCCCCeEEEEEEEChhc-ChHHHHHHHHHHHHHHhcCCCCcccceeeecc
Confidence 445799999999999 9 999999763 56789999987543 33456678999999999999999999999986
Q ss_pred cccccCCcccEEEEEecCC--cChHHHHHHhCcCC---------------------CcchHHHHHHHHHHHHHHHHHHcC
Q 004025 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLEG---------------------SQRDEYYAWGLNQIAKAVSFLNND 147 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~---------------------~~~~~~i~~gl~QI~~aL~fLH~~ 147 (778)
. ..+|+||||+ ++|.++|....... ......+..++.||+.||.|||+
T Consensus 88 ~--------~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~- 158 (301)
T d1lufa_ 88 G--------KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE- 158 (301)
T ss_dssp S--------SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH-
T ss_pred C--------CceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhccc-
Confidence 3 3789999999 57999997643210 11223355669999999999996
Q ss_pred CCccccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHH
Q 004025 148 CKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGL 227 (778)
Q Consensus 148 ~~ivH~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSL 227 (778)
.++|||||||+||+++.++.+||+|||+++.+...+... ......++..|+|||++.+ ..++.++|+|||
T Consensus 159 ~~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~t~ksDVwS~ 228 (301)
T d1lufa_ 159 RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK----ADGNDAIPIRWMPPESIFY------NRYTTESDVWAY 228 (301)
T ss_dssp TTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC--------CCBCGGGCCHHHHHH------CCCCHHHHHHHH
T ss_pred CCeEeeEEcccceEECCCCcEEEccchhheeccCCcccc----ccCCCCcCcCcCCHHHHcc------CCCChhhhhccc
Confidence 899999999999999999999999999998765432111 1112234458999999886 467889999999
Q ss_pred HHHHHHHHhCC-CCCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHh
Q 004025 228 GCLIYELFSGM-RLSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (778)
Q Consensus 228 G~liyel~tg~-~p~~~~~l~-------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~ 279 (778)
||++|||++|. +||...... ....+|..+.+++.+||+.+|.+|||+.++++
T Consensus 229 Gvvl~ell~~~~~p~~~~~~~e~~~~v~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~ 294 (301)
T d1lufa_ 229 GVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHR 294 (301)
T ss_dssp HHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hhhHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 99999999985 566432111 11356778999999999999999999999865
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.5e-37 Score=326.79 Aligned_cols=238 Identities=13% Similarity=0.166 Sum_probs=185.7
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCC--cEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeEecccc
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGS--PVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENID 94 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~--~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e~e~~~ 94 (778)
.+|++++.||.|+ | +||+|+++.+|. .|+||.+...... ...+.+.+|+++|+++ +||||+++++++.++
T Consensus 10 ~~~~~~~~iG~G~fg--~Vy~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~--- 83 (309)
T d1fvra_ 10 NDIKFQDVIGEGNFG--QVLKARIKKDGLRMDAAIKRMKEYASK-DDHRDFAGELEVLCKLGHHPNIINLLGACEHR--- 83 (309)
T ss_dssp GGCEEEEEEECGGGC--EEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEET---
T ss_pred HHcEEEEEEeeCCCc--EEEEEEECCCCeEEEEEEEEECcccCh-HHHHHHHHHHHHHHhccCCCCEeeEEEEEecC---
Confidence 4799999999999 9 999999998886 4777887643322 3456789999999999 799999999999874
Q ss_pred cCCcccEEEEEecCC--cChHHHHHHhC-------------cCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCC
Q 004025 95 ATSTKITIYIVTEPV--MPLSEKIKELG-------------LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSS 159 (778)
Q Consensus 95 g~~~~~~lyIVtE~v--~~L~~~L~~~~-------------~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~N 159 (778)
..+||||||| ++|.++|.... .........+..++.||+.||.|||+ .+++||||||+|
T Consensus 84 -----~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~-~~iiHrDlkp~N 157 (309)
T d1fvra_ 84 -----GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ-KQFIHRDLAARN 157 (309)
T ss_dssp -----TEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGG
T ss_pred -----CeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhc-CCccccccccce
Confidence 3899999999 68999987542 11222334456679999999999996 899999999999
Q ss_pred eEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCC-
Q 004025 160 VVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM- 238 (778)
Q Consensus 160 I~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~- 238 (778)
||++.++.+||+|||+++....... .....++..|+|||.+.+ ..++.++|+|||||++|||++|.
T Consensus 158 IL~~~~~~~kl~DfG~a~~~~~~~~-------~~~~~gt~~y~aPE~l~~------~~~~~~sDvwSfGvil~ell~~~~ 224 (309)
T d1fvra_ 158 ILVGENYVAKIADFGLSRGQEVYVK-------KTMGRLPVRWMAIESLNY------SVYTTNSDVWSYGVLLWEIVSLGG 224 (309)
T ss_dssp EEECGGGCEEECCTTCEESSCEECC-------C----CCTTTCCHHHHHH------CEECHHHHHHHHHHHHHHHHTTSC
T ss_pred EEEcCCCceEEcccccccccccccc-------ccceecCCcccchHHhcc------CCCCccceeehhHHHHHHHHhcCC
Confidence 9999999999999999976543211 112234568999999876 35678999999999999999976
Q ss_pred CCCChhh-------hhc------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 239 RLSKTEE-------LRN------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 239 ~p~~~~~-------l~~------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+||.... +.+ ...+|+.+.+++.+||+.||++||++.+++++-
T Consensus 225 ~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L 280 (309)
T d1fvra_ 225 TPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSL 280 (309)
T ss_dssp CTTTTCCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHhcCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 4564321 111 135677899999999999999999999999763
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-36 Score=324.61 Aligned_cols=245 Identities=16% Similarity=0.170 Sum_probs=180.9
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCC-----CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeee
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDD-----GSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHST 88 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~-----g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~ 88 (778)
++..+|+++++||.|+ | +||+|+++.. ++.||||++...... ...+.+.+|+..+.++ +||||+.+++++
T Consensus 10 i~~~~y~~~~~iG~G~fG--~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~-~~~~~~~~e~~~l~~~~~h~~iv~~~~~~ 86 (299)
T d1ywna1 10 FPRDRLKLGKPLGRGAFG--QVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRALMSELKILIHIGHHLNVVNLLGAC 86 (299)
T ss_dssp CCGGGEEEEEEEEECSSC--EEEEEEEESTTSSSCEEEEEEEEC----CH-HHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred ccHHHEEEeeEEeecCCe--EEEEEEEcCCCcccCCeEEEEEEEccccCc-HHHHHHHHHHHHHHhhcCCCeEEEeeeee
Confidence 3446799999999999 9 9999997543 467999998754333 3455677777877776 689999999988
Q ss_pred EecccccCCcccEEEEEecCC--cChHHHHHHhCcC-------------CCcchHHHHHHHHHHHHHHHHHHcCCCcccc
Q 004025 89 EVENIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHG 153 (778)
Q Consensus 89 e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~-------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~ 153 (778)
..++ ..+||||||| ++|.++|+..... .......+..++.||+.||.|||+ .+|+||
T Consensus 87 ~~~~-------~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~-~~ivHr 158 (299)
T d1ywna1 87 TKPG-------GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS-RKCIHR 158 (299)
T ss_dssp CSTT-------SCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHH-TTCCCS
T ss_pred ccCC-------CeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHh-CCCcCC
Confidence 6542 3789999999 6899999865321 112234466679999999999996 899999
Q ss_pred ccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHH
Q 004025 154 NVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYE 233 (778)
Q Consensus 154 dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liye 233 (778)
||||+||+|+.+|.+||+|||+++........ .......++..|+|||++.+ ..++.++|||||||++||
T Consensus 159 DlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~----~~~~~~~gt~~y~APE~l~~------~~~~~~sDiwS~Gvil~e 228 (299)
T d1ywna1 159 DLAARNILLSEKNVVKICDFGLARDIYKDPDY----VRKGDARLPLKWMAPETIFD------RVYTIQSDVWSFGVLLWE 228 (299)
T ss_dssp CCCGGGEEECGGGCEEECC------CCSCTTS----CCTTSCCCGGGGCCHHHHHH------CCCCHHHHHHHHHHHHHH
T ss_pred cCCccceeECCCCcEEEccCcchhhccccccc----cccCceeeCccccchhHhhc------CCCCcccceeehHHHHHH
Confidence 99999999999999999999999876543221 11122244568999999886 367889999999999999
Q ss_pred HHhCC-CCCChhh----h----hc------cCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 234 LFSGM-RLSKTEE----L----RN------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 234 l~tg~-~p~~~~~----l----~~------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
|++|. +||.... + .. ...+|+.+.+++.+||+.||.+|||+.++++|-
T Consensus 229 llt~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L 291 (299)
T d1ywna1 229 IFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 291 (299)
T ss_dssp HHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHhCCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 99875 5664321 1 11 134667899999999999999999999999874
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.2e-37 Score=330.20 Aligned_cols=240 Identities=15% Similarity=0.239 Sum_probs=190.7
Q ss_pred CCceeccCCCCCC-CceEEEEeEE---CCCCCcEEEEEEeCCCC--chhHHHHHHHHHHHHhcCCC-CCeeeEeeeeEec
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTS---KDDGSPVSIFSISGTNA--QDGHLAAARNGVKRLRTVRH-PNILAFLHSTEVE 91 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~---k~~g~~VaIK~~~~~~~--~~~~~~~~~~ev~~Lk~LrH-PnIlk~~d~~e~e 91 (778)
.+|++.+.||.|+ | +||+|++ +.+|+.||||++.+... .....+.+.+|+++|++++| |||+++++.+++.
T Consensus 24 ~~y~~~~~IG~G~fg--~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~ 101 (322)
T d1vzoa_ 24 ENFELLKVLGTGAYG--KVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE 101 (322)
T ss_dssp GGEEEEEEEEETTTE--EEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET
T ss_pred hceEEEEEEecCCCe--EEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccC
Confidence 4699999999999 8 9999987 45689999999975432 11234567899999999987 8999999999874
Q ss_pred ccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEE
Q 004025 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~K 169 (778)
..+|+||||+ ++|..++....... +..+...+.||+.||.|||+ .+++||||||+||+++.+|.+|
T Consensus 102 --------~~~~~v~e~~~~~~L~~~i~~~~~~~---e~~~~~~~~Qi~~al~~lH~-~~ivHrDiKp~Nill~~~~~vk 169 (322)
T d1vzoa_ 102 --------TKLHLILDYINGGELFTHLSQRERFT---EHEVQIYVGEIVLALEHLHK-LGIIYRDIKLENILLDSNGHVV 169 (322)
T ss_dssp --------TEEEEEECCCCSCBHHHHHHHHSCCC---HHHHHHHHHHHHHHHHHHHH-TTCCCCCCCGGGEEECTTSCEE
T ss_pred --------CceeeeeecccccHHHHHHHhccccc---HHHHHHHHHHHHHHHHHhhc-CCEEeccCCccceeecCCCCEE
Confidence 4899999999 58999998876432 33455568999999999996 9999999999999999999999
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhhh--
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-- 247 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l~-- 247 (778)
|+|||++..+...... ......+...|++||.+.+.- ..++.++|||||||++|||++|..||......
T Consensus 170 L~DFG~a~~~~~~~~~-----~~~~~~g~~~~~~pe~~~~~~----~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~ 240 (322)
T d1vzoa_ 170 LTDFGLSKEFVADETE-----RAYDFCGTIEYMAPDIVRGGD----SGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS 240 (322)
T ss_dssp ESCSSEEEECCGGGGG-----GGCGGGSCCTTCCHHHHTTCC-------CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC
T ss_pred Eeeccchhhhcccccc-----cccccccccccchhHHhhcCC----cCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 9999999876542211 112234556899999987531 24667899999999999999999998643211
Q ss_pred ----------c----cCCCCcchHHHHHHHhccCCCCCCC-----hHHHHhcc
Q 004025 248 ----------N----TASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENS 281 (778)
Q Consensus 248 ----------~----~~~iP~~L~~~i~~lL~~dP~~Rps-----~~~lL~~~ 281 (778)
. ...++..+.+++++||..||.+|++ ++++++|+
T Consensus 241 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hp 293 (322)
T d1vzoa_ 241 QAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 293 (322)
T ss_dssp HHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred HHHHHHhcccCCCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCH
Confidence 1 1246667899999999999999995 79999998
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-36 Score=321.69 Aligned_cols=243 Identities=15% Similarity=0.227 Sum_probs=188.2
Q ss_pred CCCCCceeccCCCCCC-CceEEEEeEECCCC-------CcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEee
Q 004025 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDG-------SPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLH 86 (778)
Q Consensus 16 ~~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g-------~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d 86 (778)
++...|++++.||.|+ | .||+|+.+.++ ..||||++.+.. .+.....+.+|+..++++ +||||+++++
T Consensus 10 i~~~~~~l~~~iG~G~fg--~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~e~~~l~~~~~HpnIv~~~~ 86 (299)
T d1fgka_ 10 LPRDRLVLGKPLGEGAFG--QVVLAEAIGLDKDKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLLG 86 (299)
T ss_dssp CCGGGEEEEEECC-------CEEEEEEECC----CCCEEEEEEECCCTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred ccHHHeEEeeEEeecCCc--EEEEEEEcCCCcccccCceEEEEEEECccc-ChHHHHHHHHHHHHHHHhcCCCeEEeccc
Confidence 3456899999999999 8 89999976554 379999997653 334456788888988888 8999999999
Q ss_pred eeEecccccCCcccEEEEEecCC--cChHHHHHHhCcC-------------CCcchHHHHHHHHHHHHHHHHHHcCCCcc
Q 004025 87 STEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLV 151 (778)
Q Consensus 87 ~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~-------------~~~~~~~i~~gl~QI~~aL~fLH~~~~iv 151 (778)
++.++ ..+|+||||| ++|.++|...... .......+..+++||+.||.|||+ .++|
T Consensus 87 ~~~~~--------~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~-~~iv 157 (299)
T d1fgka_ 87 ACTQD--------GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS-KKCI 157 (299)
T ss_dssp EECSS--------SSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHH-TTCC
T ss_pred ccccC--------CeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhh-CCEE
Confidence 99864 3799999999 6899999765421 122344566779999999999996 9999
Q ss_pred ccccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHH
Q 004025 152 HGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLI 231 (778)
Q Consensus 152 H~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~li 231 (778)
||||||+||+++.+|..||+|||++.......... ......++..|+|||.+.+ ..++.++|||||||++
T Consensus 158 HrDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~l~~------~~y~~k~DiwS~Gvvl 227 (299)
T d1fgka_ 158 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK----KTTNGRLPVKWMAPEALFD------RIYTHQSDVWSFGVLL 227 (299)
T ss_dssp CSCCSGGGEEECTTCCEEECSTTCCCCGGGCCTTC----CCTTSCCGGGGSCHHHHHH------CCCCHHHHHHHHHHHH
T ss_pred eeeecccceeecCCCCeEeccchhhcccccccccc----ccccCCCChhhhhhhHhcC------CCCCchhhhHHhHHHH
Confidence 99999999999999999999999998776532111 1112234458999999876 3678899999999999
Q ss_pred HHHHh-CCCCCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 232 YELFS-GMRLSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 232 yel~t-g~~p~~~~~l~-------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
|||++ |.+||...... ....+|+.+.+++.+||+.||..|||+.++++.
T Consensus 228 ~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~ 290 (299)
T d1fgka_ 228 WEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 290 (299)
T ss_dssp HHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHhccCCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence 99998 67777532211 113567789999999999999999999999874
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.6e-36 Score=319.66 Aligned_cols=243 Identities=15% Similarity=0.174 Sum_probs=187.2
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCC---cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecc
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGS---PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~---~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~ 92 (778)
..+.+.+.+.||.|+ | +||+|++..++. .||||.+++. ......+.+.+|+++|++|+||||+++++++...
T Consensus 25 ~~~~~~~~~~iG~G~fg--~Vyk~~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~- 100 (311)
T d1r0pa_ 25 SSLIVHFNEVIGRGHFG--CVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS- 100 (311)
T ss_dssp GGEEEEEEEEEEEETTE--EEEEEEECC----CEEEEEEEECCC-CCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEET-
T ss_pred HHceeccceEEeecCCe--EEEEEEEECCCCEEEEEEEEEECcc-cCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEec-
Confidence 344566688899998 8 999999876543 5899999753 3445567899999999999999999999997653
Q ss_pred cccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcCCCcEEE
Q 004025 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (778)
Q Consensus 93 ~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~~g~~KL 170 (778)
+..+|+||||| ++|.+++....... ....+..++.||+.||.|||+ .+|+||||||+||++++++.+||
T Consensus 101 ------~~~~~lv~E~~~~g~l~~~~~~~~~~~--~~~~~~~i~~qia~gL~~lH~-~~iiHrDLK~~NILl~~~~~~kL 171 (311)
T d1r0pa_ 101 ------EGSPLVVLPYMKHGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMKFLAS-KKFVHRDLAARNCMLDEKFTVKV 171 (311)
T ss_dssp ------TTEEEEEEECCTTCBHHHHHHCTTCCC--BHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEECTTCCEEE
T ss_pred ------CCceEEEEEEeecCchhhhhccccccc--hHHHHHHHHHHHHHhhhhhcc-cCcccCCccHHhEeECCCCCEEE
Confidence 23799999999 57888877544322 223345569999999999996 89999999999999999999999
Q ss_pred EecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh-h---
Q 004025 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-L--- 246 (778)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~-l--- 246 (778)
+|||+++.......... .......++..|+|||.+.+ ..++.++|||||||++|||++|+.||.... .
T Consensus 172 ~DFG~~~~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~------~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~ 243 (311)
T d1r0pa_ 172 ADFGLARDMYDKEFDSV--HNKTGAKLPVKWMALESLQT------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI 243 (311)
T ss_dssp CSSGGGCCTTTTTCCCT--TCTTCSSCCGGGSCHHHHHH------CCCCHHHHHHHHHHHHHHHHTTSCCSCC------C
T ss_pred ecccchhhccccccccc--eecccccccccccChHHHhc------CCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHH
Confidence 99999987765322111 11112234558999999876 367889999999999999999776653211 0
Q ss_pred ----------hccCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 247 ----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 247 ----------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
.....+|+.+.+++.+||..||++||++.+++++
T Consensus 244 ~~~i~~g~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~ 287 (311)
T d1r0pa_ 244 TVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 287 (311)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHcCCCCCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 0113567789999999999999999999999876
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.6e-36 Score=319.94 Aligned_cols=244 Identities=13% Similarity=0.172 Sum_probs=181.3
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCCc
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~~ 98 (778)
.|.+.++||.|+ | +||+|+. +|+.||||++... .......+.|+..++.++||||+++++++..+...
T Consensus 4 ~~~l~~~iG~G~fg--~Vy~~~~--~g~~vAvK~~~~~---~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~---- 72 (303)
T d1vjya_ 4 TIVLQESIGKGRFG--EVWRGKW--RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGT---- 72 (303)
T ss_dssp GEEEEEEEECCSSS--EEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSS----
T ss_pred EEEEEEEEeeCCCe--EEEEEEE--CCEEEEEEEECcc---chhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCc----
Confidence 588999999999 8 9999997 5899999999643 22223345677788889999999999999876532
Q ss_pred ccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHc-------CCCccccccCCCCeEEcCCCcEE
Q 004025 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNN-------DCKLVHGNVCLSSVVVTQTLDWK 169 (778)
Q Consensus 99 ~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~-------~~~ivH~dLkp~NI~v~~~g~~K 169 (778)
...+||||||| ++|..+|++.... ......++.|++.||.|||+ +.+|+||||||+||+|+.+|.+|
T Consensus 73 ~~~~~lv~Ey~~~g~L~~~l~~~~l~----~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~K 148 (303)
T d1vjya_ 73 WTQLWLVSDYHEHGSLFDYLNRYTVT----VEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC 148 (303)
T ss_dssp SEEEEEEEECCTTCBHHHHHHHCCBC----HHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEE
T ss_pred ceEEEEEEecccCCCHHHHHhcCCCC----HHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeE
Confidence 35799999999 6899999876532 23334558999999999995 25899999999999999999999
Q ss_pred EEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh----
Q 004025 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE---- 245 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~---- 245 (778)
|+|||+++.......... .......++..|+|||++.+........++.++|+|||||+||||++|.+++....
T Consensus 149 l~DFGl~~~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~ 226 (303)
T d1vjya_ 149 IADLGLAVRHDSATDTID--IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL 226 (303)
T ss_dssp ECCCTTCEEEETTTTEEC--C----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCC
T ss_pred EEecCccccccCCCccee--ccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCccccccc
Confidence 999999987755322111 11122345669999999876422111124568999999999999999976652110
Q ss_pred --------------hhc-------cCCCCc---------chHHHHHHHhccCCCCCCChHHHHhc
Q 004025 246 --------------LRN-------TASIPK---------SLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 246 --------------l~~-------~~~iP~---------~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
+.. ...+|. .+.+++.+||+.||.+|||+.++++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~ 291 (303)
T d1vjya_ 227 PYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT 291 (303)
T ss_dssp TTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred chhhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence 000 012332 26778899999999999999998865
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-35 Score=317.69 Aligned_cols=242 Identities=15% Similarity=0.174 Sum_probs=189.4
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEEC-----CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeeEeeeeE
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSK-----DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTE 89 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k-----~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~L-rHPnIlk~~d~~e 89 (778)
+..+|++++.||.|+ | +||+|+.+ .+++.||||++.... .......+.+|+.+++.+ +||||++++++++
T Consensus 21 ~~~~~~l~~~iG~G~fg--~Vy~a~~~~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~ 97 (311)
T d1t46a_ 21 PRNRLSFGKTLGAGAFG--KVVEATAYGLIKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHMNIVNLLGACT 97 (311)
T ss_dssp CGGGEEEEEEEEECSSE--EEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred CHHHeEEeeEEeecCCe--EEEEEEEeccccCCCCeEEEEEEECccc-CHHHHHHHHHHHHHHHhccCCCCEEEEEEEEe
Confidence 345678899999998 8 99999863 456789999997643 334456788999999999 6999999999998
Q ss_pred ecccccCCcccEEEEEecCC--cChHHHHHHhCcC---------------CCcchHHHHHHHHHHHHHHHHHHcCCCccc
Q 004025 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLE---------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVH 152 (778)
Q Consensus 90 ~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~---------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH 152 (778)
+. ..+||||||| ++|..+|...... .......+..++.||+.||.|||+ .+++|
T Consensus 98 ~~--------~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~-~~ivH 168 (311)
T d1t46a_ 98 IG--------GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS-KNCIH 168 (311)
T ss_dssp SS--------SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH-TTCCC
T ss_pred eC--------CEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh-CCeee
Confidence 64 3789999999 5799998765421 112233455669999999999996 89999
Q ss_pred cccCCCCeEEcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHH
Q 004025 153 GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIY 232 (778)
Q Consensus 153 ~dLkp~NI~v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liy 232 (778)
|||||+||+++.+|..||+|||+++....... ........++..|+|||++.+ ..++.++|+|||||++|
T Consensus 169 rDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DIwS~G~~l~ 238 (311)
T d1t46a_ 169 RDLAARNILLTHGRITKICDFGLARDIKNDSN----YVVKGNARLPVKWMAPESIFN------CVYTFESDVWSYGIFLW 238 (311)
T ss_dssp SCCSGGGEEEETTTEEEECCCGGGSCTTSCTT----SEECSSSEECGGGCCHHHHHH------CCCCHHHHHHHHHHHHH
T ss_pred cccccccccccccCcccccccchheeccCCCc----ceEeeecccChHHcCHHHhcC------CCCCCcccccchHHHHH
Confidence 99999999999999999999999987765321 111122344568999999876 36788999999999999
Q ss_pred HHHh-CCCCCChh----hhhc----------cCCCCcchHHHHHHHhccCCCCCCChHHHHhc
Q 004025 233 ELFS-GMRLSKTE----ELRN----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (778)
Q Consensus 233 el~t-g~~p~~~~----~l~~----------~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~ 280 (778)
||++ |.+++... .+.. ...+|..+.+++.+||+.||++||++.++++.
T Consensus 239 ellt~g~p~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~ 301 (311)
T d1t46a_ 239 ELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL 301 (311)
T ss_dssp HHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 9998 55555432 1111 13567889999999999999999999998864
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-35 Score=316.99 Aligned_cols=243 Identities=13% Similarity=0.147 Sum_probs=190.9
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECC-----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEe
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKD-----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~-----~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~ 90 (778)
...+|+++++||.|+ | +||+|+++. ++..||||+++... .......+.+|++++++++||||+++++++..
T Consensus 18 ~~~~~~l~~~lG~G~fG--~Vy~a~~~~~~~~~~~~~VAvK~~~~~~-~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~ 94 (308)
T d1p4oa_ 18 AREKITMSRELGQGSFG--MVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 94 (308)
T ss_dssp CGGGEEEEEEEEECSSS--EEEEEEEEEEETTEEEEEEEEEECCTTS-CHHHHHHHHHHHHHGGGCCCTTBCCEEEEECS
T ss_pred cHHHeEEeeEEeeCCCe--EEEEEEECCcccCCCCcEEEEEEECccc-ChHHHHHHHHHHHHHHHcCCCCEeeeeeEEec
Confidence 345799999999999 9 999998753 35789999997543 33455678999999999999999999999976
Q ss_pred cccccCCcccEEEEEecCC--cChHHHHHHhC-------cCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeE
Q 004025 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELG-------LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVV 161 (778)
Q Consensus 91 e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~-------~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~ 161 (778)
+ ..+||||||| ++|..++.... .........+..++.||+.||.|||+ ++|+||||||+||+
T Consensus 95 ~--------~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~-~~ivHrDlk~~NiL 165 (308)
T d1p4oa_ 95 G--------QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA-NKFVHRDLAARNCM 165 (308)
T ss_dssp S--------SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH-TTCBCSCCSGGGEE
T ss_pred C--------CceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhh-CCeeeceEcCCcee
Confidence 4 3789999999 67988886532 11112334466679999999999996 89999999999999
Q ss_pred EcCCCcEEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCC-CC
Q 004025 162 VTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM-RL 240 (778)
Q Consensus 162 v~~~g~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~-~p 240 (778)
++.++.+||+|||+++.+..... ........++..|++||.+.+ ..++.++|+|||||++|||++|. +|
T Consensus 166 ld~~~~~Kl~DFGla~~~~~~~~----~~~~~~~~~t~~y~aPe~l~~------~~~~~~~Dv~S~G~il~El~t~~~~p 235 (308)
T d1p4oa_ 166 VAEDFTVKIGDFGMTRDIYETDY----YRKGGKGLLPVRWMSPESLKD------GVFTTYSDVWSFGVVLWEIATLAEQP 235 (308)
T ss_dssp ECTTCCEEECCTTCCCGGGGGGC----EEGGGSSEECGGGCCHHHHHH------CCCCHHHHHHHHHHHHHHHHHTSCCT
T ss_pred ecCCceEEEeecccceeccCCcc----eeeccceecccccCCHHHHcc------CCCCcccccccHHHHHHHHHhCCCCC
Confidence 99999999999999987654321 111222345568999999876 35677999999999999999985 66
Q ss_pred CChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHHhcc
Q 004025 241 SKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 241 ~~~~~l~-------------~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
+...... ....+|..+.+++.+||+.+|.+|||+.+++++-
T Consensus 236 ~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L 289 (308)
T d1p4oa_ 236 YQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 289 (308)
T ss_dssp TTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCCHHHHHHHHHhCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 6432111 1135667899999999999999999999998753
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.3e-34 Score=308.32 Aligned_cols=238 Identities=12% Similarity=0.038 Sum_probs=184.4
Q ss_pred CCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeeEeeeeEecccccCC
Q 004025 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 19 ~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrHPnIlk~~d~~e~e~~~g~~ 97 (778)
.+|++++.||.|+ | +||+|+++.+|+.||||++..+...+ .+.+|+++++.++|++++..+..+..+
T Consensus 7 ~rY~l~~~iG~G~fG--~Vy~a~~~~~~~~vAvK~~~~~~~~~----~~~~E~~i~~~l~~~~~i~~~~~~~~~------ 74 (299)
T d1ckia_ 7 NRYRLGRKIGSGSFG--DIYLGTDIAAGEEVAIKLECVKTKHP----QLHIESKIYKMMQGGVGIPTIRWCGAE------ 74 (299)
T ss_dssp TTEEEEEEEEECSSS--EEEEEEETTTTEEEEEEEEESCTTSC----CHHHHHHHHHHSTTSTTCCCEEEEEEE------
T ss_pred CEEEEeEEEeeCCCc--EEEEEEECCCCCEEEEEEEchhccCH----HHHHHHHHHHHccCCCcccEEEEEEec------
Confidence 3699999999999 9 99999999999999999988654332 367899999999987766655555433
Q ss_pred cccEEEEEecCCc-ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC---CCcEEEEec
Q 004025 98 TKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ---TLDWKLHAF 173 (778)
Q Consensus 98 ~~~~lyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~---~g~~KL~dF 173 (778)
....||||||++ .|...+..... ......+..++.||+.||+|||+ .+|+||||||+||+++. ++.+||+||
T Consensus 75 -~~~~~ivme~~~~~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~-~~iiHrDiKp~NIl~~~~~~~~~vkl~DF 150 (299)
T d1ckia_ 75 -GDYNVMVMELLGPSLEDLFNFCSR--KFSLKTVLLLADQMISRIEYIHS-KNFIHRDVKPDNFLMGLGKKGNLVYIIDF 150 (299)
T ss_dssp -TTEEEEEEECCCCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHH-TTEECSCCCGGGEEECCGGGTTCEEECCC
T ss_pred -CCEEEEEEEEcCCchhhhhhhccC--CCcHHHHHHHHHHHHHHHHHHHH-CCeeeccCCHhhccccccCCCceeeeecc
Confidence 348999999994 57776655432 12344566779999999999996 99999999999999874 456999999
Q ss_pred ccccccCCCCCCCCCCcccc-ccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhhh------
Q 004025 174 DVLSEFDGNNEAANGPMLQY-AWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------ 246 (778)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~-~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~l------ 246 (778)
|+++.+.........+.... ...++..|+|||++.+ ..++.++|+|||||++|||++|..||.....
T Consensus 151 G~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~ 224 (299)
T d1ckia_ 151 GLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLG------IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK 224 (299)
T ss_dssp SSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTT------BCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------
T ss_pred CcceeccccccccceeccccCCcCCCccccCHHHHhC------CCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHH
Confidence 99998865432222122222 2345669999999887 4678899999999999999999998853110
Q ss_pred --------------hccCCCCcchHHHHHHHhccCCCCCCChHHHH
Q 004025 247 --------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLI 278 (778)
Q Consensus 247 --------------~~~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL 278 (778)
.....+|+.+.+++.+|++.+|.+||++.++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~ 270 (299)
T d1ckia_ 225 YERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLR 270 (299)
T ss_dssp HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHH
T ss_pred HHHhhcccCCCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHH
Confidence 01246888999999999999999999987654
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=4.2e-34 Score=303.80 Aligned_cols=238 Identities=13% Similarity=0.105 Sum_probs=189.2
Q ss_pred CCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCC-CCeeeEeeeeEeccccc
Q 004025 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRH-PNILAFLHSTEVENIDA 95 (778)
Q Consensus 18 ~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~LrH-PnIlk~~d~~e~e~~~g 95 (778)
+.+|+|++.||+|+ | +||+|+++.+|+.||||++......+ .+++|++.++.|+| |||+.++++++..
T Consensus 4 g~~Y~i~~~iG~G~fG--~Vy~a~~~~~~~~vAvK~~~~~~~~~----~~~~e~~~~~~l~~~~~i~~~~~~~~~~---- 73 (293)
T d1csna_ 4 GVHYKVGRRIGEGSFG--VIFEGTNLLNNQQVAIKFEPRRSDAP----QLRDEYRTYKLLAGCTGIPNVYYFGQEG---- 73 (293)
T ss_dssp TTTEEEEEEEEECSSC--EEEEEEETTTTEEEEEEEEECCTTSC----CHHHHHHHHHHTTTCTTCCCEEEEEEET----
T ss_pred CCceEEEEEEecCCCe--EEEEEEECCCCCEEEEEEEccccCcH----HHHHHHHHHHHhcCCCCCCEEEEEeecC----
Confidence 35799999999999 9 99999999999999999987654332 46788999999975 8999999998864
Q ss_pred CCcccEEEEEecCC-cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEEcC-----CCcEE
Q 004025 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ-----TLDWK 169 (778)
Q Consensus 96 ~~~~~~lyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v~~-----~g~~K 169 (778)
...|+||||+ ++|..++...+.. .....+..++.|++.||.|||+ .+|+||||||+||+++. .+.+|
T Consensus 74 ----~~~~~vme~~~~~l~~~~~~~~~~--~~~~~~~~i~~q~~~~l~~lH~-~giiHrDiKp~Nili~~~~~~~~~~vk 146 (293)
T d1csna_ 74 ----LHNVLVIDLLGPSLEDLLDLCGRK--FSVKTVAMAAKQMLARVQSIHE-KSLVYRDIKPDNFLIGRPNSKNANMIY 146 (293)
T ss_dssp ----TEEEEEEECCCCBHHHHHHHTTTC--CCHHHHHHHHHHHHHHHHHHHT-TTEECCCCCGGGEEECCSSSTTTTCEE
T ss_pred ----CccEEEEEecCCCHHHHHHhhccc--hhhHHHHHHHHHHHHHHHHHHH-CCceeccCCccceeecCcccccCCceE
Confidence 4899999999 4688888765432 2344456679999999999995 99999999999999974 67899
Q ss_pred EEecccccccCCCCCCCCCCcc-ccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHhCCCCCChhh---
Q 004025 170 LHAFDVLSEFDGNNEAANGPML-QYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE--- 245 (778)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~-~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~tg~~p~~~~~--- 245 (778)
|+|||+++.+.........+.. .....++..|+|||++.+ ..++.++|+|||||++|||++|..||....
T Consensus 147 l~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~------~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~ 220 (293)
T d1csna_ 147 VVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLG------REQSRRDDLEALGHVFMYFLRGSLPWQGLKAAT 220 (293)
T ss_dssp ECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT------CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCC
T ss_pred EcccceeEEcccCccccceeecccCceEEchhhcCHHHhcC------CCCChHHHHHHhhHHHHHHHhCCCcCCCccchh
Confidence 9999999887654322111111 223345679999999886 467889999999999999999999985311
Q ss_pred -------h---------hc-cCCCCcchHHHHHHHhccCCCCCCChHHHH
Q 004025 246 -------L---------RN-TASIPKSLLPDYQRLLSSMPSRRLNSSKLI 278 (778)
Q Consensus 246 -------l---------~~-~~~iP~~L~~~i~~lL~~dP~~Rps~~~lL 278 (778)
+ .. ...+|+.+.+++..|+..+|..||+.+.+.
T Consensus 221 ~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~ 270 (293)
T d1csna_ 221 NKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQ 270 (293)
T ss_dssp HHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHH
T ss_pred HHHHHHHHHhccCCCChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHH
Confidence 0 01 146899999999999999999999976654
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=9.1e-33 Score=301.14 Aligned_cols=239 Identities=16% Similarity=0.184 Sum_probs=180.7
Q ss_pred CCCCceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-----------CCCeeeE
Q 004025 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-----------HPNILAF 84 (778)
Q Consensus 17 ~~~~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-----------HPnIlk~ 84 (778)
.+-+|+++++||.|+ | +||+|+++.+|+.||||++.+. ....+.+.+|+++|+.++ ||||+++
T Consensus 11 ~~~rY~i~~~LG~G~fg--~Vy~~~~~~~g~~vAvKvi~~~---~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~ 85 (362)
T d1q8ya_ 11 KDARYILVRKLGWGHFS--TVWLAKDMVNNTHVAMKIVRGD---KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKL 85 (362)
T ss_dssp TTTTEEEEEEEEECSSE--EEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCC
T ss_pred cCCcEEEEEEEeeCCCe--EEEEEEECCCCCEEEEEEEecc---ccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEE
Confidence 344699999999998 8 9999999999999999999753 233456788999888875 5789999
Q ss_pred eeeeEecccccCCcccEEEEEecCC--cChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeEE
Q 004025 85 LHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV 162 (778)
Q Consensus 85 ~d~~e~e~~~g~~~~~~lyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~v 162 (778)
+++++... ....+++++++ ....................++.++.||+.||.|||+..+|+||||||+||++
T Consensus 86 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll 159 (362)
T d1q8ya_ 86 LDHFNHKG------PNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLM 159 (362)
T ss_dssp CEEEEEEE------TTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEE
T ss_pred EEEeeecc------ccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeee
Confidence 99987654 33566666665 33333333333333344556788899999999999976899999999999999
Q ss_pred cCCCc------EEEEecccccccCCCCCCCCCCccccccccCCCCCCccccccccccccCCCCCcchhHHHHHHHHHHHh
Q 004025 163 TQTLD------WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS 236 (778)
Q Consensus 163 ~~~g~------~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~DiwSLG~liyel~t 236 (778)
+.+|. +||+|||.+....... ....++..|+|||++.+ ..++.++|+|||||++++|++
T Consensus 160 ~~~~~~~~~~~~kl~dfg~s~~~~~~~---------~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlG~il~el~~ 224 (362)
T d1q8ya_ 160 EIVDSPENLIQIKIADLGNACWYDEHY---------TNSIQTREYRSPEVLLG------APWGCGADIWSTACLIFELIT 224 (362)
T ss_dssp EEEETTTTEEEEEECCCTTCEETTBCC---------CSCCSCGGGCCHHHHHT------CCCCTHHHHHHHHHHHHHHHH
T ss_pred eccCcccccceeeEeeccccccccccc---------ccccccccccChhhccc------cCCCccccccchHHHHHHHHH
Confidence 87654 9999999987664321 12245568999999876 367789999999999999999
Q ss_pred CCCCCChhhh--------------h---------------------------cc---------------CC----CCcch
Q 004025 237 GMRLSKTEEL--------------R---------------------------NT---------------AS----IPKSL 256 (778)
Q Consensus 237 g~~p~~~~~l--------------~---------------------------~~---------------~~----iP~~L 256 (778)
|+.||..... . .+ .. .++.+
T Consensus 225 g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (362)
T d1q8ya_ 225 GDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEI 304 (362)
T ss_dssp SSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHH
T ss_pred CCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHH
Confidence 9998753210 0 00 01 12346
Q ss_pred HHHHHHHhccCCCCCCChHHHHhcc
Q 004025 257 LPDYQRLLSSMPSRRLNSSKLIENS 281 (778)
Q Consensus 257 ~~~i~~lL~~dP~~Rps~~~lL~~~ 281 (778)
.+++.+||..||.+|||+.++|+|+
T Consensus 305 ~dll~~mL~~dP~~Rpta~e~L~Hp 329 (362)
T d1q8ya_ 305 SDFLSPMLQLDPRKRADAGGLVNHP 329 (362)
T ss_dssp HHHHGGGGCSSTTTCBCHHHHHTCG
T ss_pred HHHHHHHCCCChhHCcCHHHHhcCc
Confidence 6778999999999999999999998
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.68 E-value=2.2e-17 Score=162.61 Aligned_cols=134 Identities=15% Similarity=0.077 Sum_probs=100.9
Q ss_pred ceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc----------------hhHHHHHHHHHHHHhcCCCCCeee
Q 004025 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ----------------DGHLAAARNGVKRLRTVRHPNILA 83 (778)
Q Consensus 21 Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~----------------~~~~~~~~~ev~~Lk~LrHPnIlk 83 (778)
|.++++||+|+ | +||+|++. +|+.||||++...... ......+.+|+..|.++.|+++..
T Consensus 2 ~~vg~~IG~G~~g--~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~ 78 (191)
T d1zara2 2 DAIGKLMGEGKES--AVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPK 78 (191)
T ss_dssp SEEEEEEEECSSE--EEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCC
T ss_pred chhCCEeeeCcce--EEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcce
Confidence 67899999998 8 99999986 6899999987532110 011234567899999999999998
Q ss_pred EeeeeEecccccCCcccEEEEEecCCc--ChHHHHHHhCcCCCcchHHHHHHHHHHHHHHHHHHcCCCccccccCCCCeE
Q 004025 84 FLHSTEVENIDATSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVV 161 (778)
Q Consensus 84 ~~d~~e~e~~~g~~~~~~lyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dLkp~NI~ 161 (778)
.++... .+++|||+. ++.. ..... ...++.||+.+|.|||+ ++++||||||+||+
T Consensus 79 ~~~~~~------------~~lvme~~~~~~~~~------l~~~~----~~~i~~ql~~~l~~lH~-~giiHrDiKP~NIL 135 (191)
T d1zara2 79 VYAWEG------------NAVLMELIDAKELYR------VRVEN----PDEVLDMILEEVAKFYH-RGIVHGDLSQYNVL 135 (191)
T ss_dssp EEEEET------------TEEEEECCCCEEGGG------CCCSC----HHHHHHHHHHHHHHHHH-TTEECSCCSTTSEE
T ss_pred EEEecC------------CEEEEEeeccccccc------hhhHH----HHHHHHHHHHHHHHHhh-CCEEEccCChhhee
Confidence 886532 278999994 2221 11111 23348999999999996 89999999999999
Q ss_pred EcCCCcEEEEecccccccCC
Q 004025 162 VTQTLDWKLHAFDVLSEFDG 181 (778)
Q Consensus 162 v~~~g~~KL~dFgla~~~~~ 181 (778)
++++| ++|+|||.+.....
T Consensus 136 v~~~~-~~liDFG~a~~~~~ 154 (191)
T d1zara2 136 VSEEG-IWIIDFPQSVEVGE 154 (191)
T ss_dssp EETTE-EEECCCTTCEETTS
T ss_pred eeCCC-EEEEECCCcccCCC
Confidence 98654 89999999877653
|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Constant regulatory domain of protein phosphatase 2a, pr65alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.20 E-value=7.2e-11 Score=133.71 Aligned_cols=235 Identities=15% Similarity=0.143 Sum_probs=187.4
Q ss_pred hhHHhhhcccCChhhHhHhhhhchhhhcCCChhhhhhchHHHHHHHHhhCCC--CchhhHHHHHhccCCChhhhhhhhHH
Q 004025 298 TIHFMEILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSA--AAPALTALLKMGSWLSTEEFSVKVLP 375 (778)
Q Consensus 298 ~~~~Le~l~~k~~~EK~~F~~~L~~~l~~fp~~~~~~kILP~Ll~~~~~~~~--~~~~L~~llki~~~l~~eef~~~i~P 375 (778)
.+.++.++...+++.+....+.|....+..-..-..+.++|.|...+...+. ...+...+.+|+..++.+++...+.|
T Consensus 50 lip~l~~~~~~~~ev~~~~~~~l~~~~~~~~~~~~~~~ll~~l~~l~~~~~~~Vr~~a~~~l~~i~~~~~~~~~~~~l~p 129 (588)
T d1b3ua_ 50 LLPFLTDTIYDEDEVLLALAEQLGTFTTLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRAISHEHSPSDLEAHFVP 129 (588)
T ss_dssp HHHHHHHTCCCCHHHHHHHHHHHTTCSGGGTSGGGGGGGHHHHHHHTTSSCHHHHHHHHHHHHHHHTTSCHHHHHHTHHH
T ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 4455555533333334444444443332221122456788887766554432 22456677889999999999999999
Q ss_pred HHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHHHHHH
Q 004025 376 TIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYL 455 (778)
Q Consensus 376 ~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~LL~~l 455 (778)
.+..|..+.....|...+.-+..+..+++.... ..+++.+...+.|.++.||..+.+++..++..++...+..+|++.|
T Consensus 130 ~i~~L~~~~~~~~r~~a~~ll~~~~~~~~~~~~-~~l~~~~~~l~~D~~~~VR~~a~~~l~~~~~~~~~~~~~~~l~~~l 208 (588)
T d1b3ua_ 130 LVKRLAGGDWFTSRTSACGLFSVCYPRVSSAVK-AELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDNVKSEIIPMF 208 (588)
T ss_dssp HHHHHHTCSSHHHHHHHGGGHHHHTTTSCHHHH-HHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTSCHHHHHHTHHHHH
T ss_pred HHHHHhcccchHHHHHHHHHHHHHHHHhhHHHH-HHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHH
Confidence 999998887778899999999999999988754 5689999999999999999999999999999999999999999999
Q ss_pred HhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhhheeee--cc------------------
Q 004025 456 SKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL--SY------------------ 515 (778)
Q Consensus 456 aklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~l~a--~~------------------ 515 (778)
..+..|++..||..+..|++.|+..++.+.+...+++.|. ..+.|+.+.+|.++..+ .+
T Consensus 209 ~~l~~d~~~~vr~~a~~~l~~i~~~~~~~~~~~~i~~~l~-~~~~D~~~~Vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~ 287 (588)
T d1b3ua_ 209 SNLASDEQDSVRLLAVEACVNIAQLLPQEDLEALVMPTLR-QAAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQ 287 (588)
T ss_dssp HHHHTCSCHHHHTTHHHHHHHHHHHSCHHHHHHHTHHHHH-HHHTCSSHHHHHHHHHTHHHHHHHHCHHHHHHTHHHHHH
T ss_pred HHHhcCCchhhHHHHHHHHHHhhccCCHHHHHHHHHHHHH-HhcccccHHHHHHHHHhHHHHHHHhhhhhhhhhhhHHHH
Confidence 9999999999999999999999999999888889999999 99999999999988776 10
Q ss_pred -----CCHHHHHHHHHHHHHHHHH
Q 004025 516 -----LNCDVRSKAFQAVDQFLQI 534 (778)
Q Consensus 516 -----~~~~VR~~a~~~~~~~l~~ 534 (778)
.+.+||..|.+.+..++..
T Consensus 288 ~ll~d~~~~vr~~a~~~l~~~~~~ 311 (588)
T d1b3ua_ 288 NLMKDCEAEVRAAASHKVKEFCEN 311 (588)
T ss_dssp HHHTCSSHHHHHHHHHHHHHHHHT
T ss_pred HHHhccchHHHHHHHHHHHHHHHH
Confidence 7899999999988877654
|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Constant regulatory domain of protein phosphatase 2a, pr65alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.18 E-value=3.8e-11 Score=136.11 Aligned_cols=207 Identities=18% Similarity=0.164 Sum_probs=126.0
Q ss_pred ChhhHhHhhhhchhhhcCCChhhhhhchHHHHHHHHhhCCC--CchhhHHHHHhccCCChhhhhhhhHHHHHHhhcCChH
Q 004025 309 DSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSA--AAPALTALLKMGSWLSTEEFSVKVLPTIVKLFASNDR 386 (778)
Q Consensus 309 ~~~EK~~F~~~L~~~l~~fp~~~~~~kILP~Ll~~~~~~~~--~~~~L~~llki~~~l~~eef~~~i~P~i~~lF~~~Dr 386 (778)
+++-+...++.+......+........++|.|.+.++...- ...++..+-.++..+..+.|...+.|.+..++.++..
T Consensus 376 ~~~v~~~~~~~l~~~~~~~~~~~~~~~ll~~l~~~~~d~~~~~r~~~~~~l~~l~~~~~~~~~~~~l~~~l~~~l~D~~~ 455 (588)
T d1b3ua_ 376 CPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVY 455 (588)
T ss_dssp CHHHHHHHHTTCHHHHHHSCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHGGGCSSH
T ss_pred hhhhhhHHHHHHHHHHhhcchhhhhhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcChHhHHHHHHHHHHhhccCCch
Confidence 33444555555555555555555555566666655543321 1112222334444455566666666666666666666
Q ss_pred HHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHHHHHHHhhccCCCCcc
Q 004025 387 AIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAI 466 (778)
Q Consensus 387 ~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~LL~~laklq~D~~~~I 466 (778)
.||...++.|..++..++++...+.|+|.+...+.|.+..+|..++.++..+++.++.....++++|.|.++..|+.|.|
T Consensus 456 ~VR~~A~~~L~~l~~~~~~~~~~~~i~~~l~~~~~~~~~~~R~~~~~~l~~l~~~~~~~~~~~~ilp~ll~~~~D~v~nV 535 (588)
T d1b3ua_ 456 AIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMAGDPVANV 535 (588)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHTHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHGGGCSCHHH
T ss_pred hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHcCCCCHHH
Confidence 66666666666666666666666666666666666666666766666666666666666666666666666666666667
Q ss_pred hhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhhheeeeccCCHHHHHHHHHHHHH
Q 004025 467 RTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKILSYLNCDVRSKAFQAVDQ 530 (778)
Q Consensus 467 Rtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~l~a~~~~~~VR~~a~~~~~~ 530 (778)
|.+++.+|++|.++++.+..+..+.+++. +.+.|+. .+||..|.++++.
T Consensus 536 R~~a~~~l~~i~~~~~~~~~~~~i~~~l~-~L~~D~d--------------~dVr~~A~~al~~ 584 (588)
T d1b3ua_ 536 RFNVAKSLQKIGPILDNSTLQSEVKPILE-KLTQDQD--------------VDVKYFAQEALTV 584 (588)
T ss_dssp HHHHHHHHHHHGGGSCHHHHHHHHHHHHH-HHTTCSS--------------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCcHhHHHHHHHHHH-HHcCCCC--------------HHHHHHHHHHHHH
Confidence 77766677777666666555555666666 6666654 5666666666654
|
| >d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin beta species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.07 E-value=0.00012 Score=77.42 Aligned_cols=223 Identities=11% Similarity=0.106 Sum_probs=154.8
Q ss_pred hhHhHhhhhchhhhcCCChhhh---hhchHHHHHHHHhhCCCCchh----hHHHHHhccCC----ChhhhhhhhHHHHHH
Q 004025 311 VEKDTFFRKLPNLAEQLPRQIV---LKKLLPLLASALEFGSAAAPA----LTALLKMGSWL----STEEFSVKVLPTIVK 379 (778)
Q Consensus 311 ~EK~~F~~~L~~~l~~fp~~~~---~~kILP~Ll~~~~~~~~~~~~----L~~llki~~~l----~~eef~~~i~P~i~~ 379 (778)
..+...+..+....+....... ...+++.++..+........+ +..+..+.... ..+.+...+.+.+..
T Consensus 144 ~~~~~~l~~l~~~~~~~~~~~~~~~~~~il~~~~~~l~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 223 (458)
T d1ibrb_ 144 HMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCE 223 (458)
T ss_dssp HHHHHHHHHHHHHHHHSCGGGTGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHTTTTHHHHTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHhHhhHHH
Confidence 3444555555555554444433 344678888777654433222 22233333322 234455667888899
Q ss_pred hhcCChHHHHHHHHHhHHHHHhhcChh---hhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhcc---------------
Q 004025 380 LFASNDRAIRVALLQHIDQYGQSFSAQ---VVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPK--------------- 441 (778)
Q Consensus 380 lF~~~Dr~iR~~LL~~l~~~~~~l~~~---~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pk--------------- 441 (778)
++.++|..+|...++.|..+++..+.. .+.+.+++.+..++.+.+..+|..++..+..++..
T Consensus 224 ~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~l~~i~~~~~~~~~~~~~~~~~~ 303 (458)
T d1ibrb_ 224 ATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQG 303 (458)
T ss_dssp HTTCSSHHHHHHHHHHHHHHHHHCGGGCTTTTTTTHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCSS
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHhh
Confidence 999999999999999999998877653 34555677778888999999999888777665421
Q ss_pred ----CC----hhhHhHHHHHHHHhhcc-------CCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCchh
Q 004025 442 ----LS----QRTISGSLLKYLSKLQV-------DEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPA 506 (778)
Q Consensus 442 ----L~----~~~l~~~LL~~laklq~-------D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~ 506 (778)
+. .......+++.+..... |.+..+|.....|++.++..+++.. -..|++.+. ..++|+.|..
T Consensus 304 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~-~~~l~~~i~-~~l~s~~~~~ 381 (458)
T d1ibrb_ 304 RPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDI-VPHVLPFIK-EHIKNPDWRY 381 (458)
T ss_dssp SCSSCCCCCHHHHHHHHHHHHHHHHTTCCCSSCCTTCCSHHHHHHHHHHHHHHHTTTTH-HHHHHHHHH-HHTTCSSHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHhhhhcchhhhccccccHHHHHHHHHHHHHHhccHhh-hhHHHHHHH-HHhcCCCHHH
Confidence 11 12234556666666543 3456799999999999999998765 456788888 9999999999
Q ss_pred hhheeee--------------cc--------------CCHHHHHHHHHHHHHHHHHH
Q 004025 507 RGAAKIL--------------SY--------------LNCDVRSKAFQAVDQFLQIV 535 (778)
Q Consensus 507 R~A~l~a--------------~~--------------~~~~VR~~a~~~~~~~l~~l 535 (778)
|.||+++ .| ++..||..|..++..|.+.+
T Consensus 382 r~aal~~l~~i~~~~~~~~~~~~l~~i~~~l~~~l~d~~~~VR~~a~~~l~~i~~~~ 438 (458)
T d1ibrb_ 382 RDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELL 438 (458)
T ss_dssp HHHHHHHHHHTSSSSCTTTTCTTTTTHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHh
Confidence 9999987 01 78999999999998877554
|
| >d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.60 E-value=0.00011 Score=77.98 Aligned_cols=186 Identities=13% Similarity=0.130 Sum_probs=128.9
Q ss_pred CChhhhhhchHHHHHHHHhhCCCC--chhhHHHHHhccCCCh---hhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHh
Q 004025 327 LPRQIVLKKLLPLLASALEFGSAA--APALTALLKMGSWLST---EEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQ 401 (778)
Q Consensus 327 fp~~~~~~kILP~Ll~~~~~~~~~--~~~L~~llki~~~l~~---eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~ 401 (778)
.........++|.|...+...+.. ..++..+-.++..-.. .-+...++|.+++++...+..++...+.-+..+..
T Consensus 180 ~~~~~~~~~~l~~l~~ll~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~Lv~ll~~~~~~~~~~al~~l~~l~~ 259 (434)
T d1q1sc_ 180 APPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVT 259 (434)
T ss_dssp CCCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTT
T ss_pred cchhhhhhhHHHHHHHHHhccccchhhhHHhhhcccchhhhhhHHHHhhcccchhcccccccchhhhhhchhhhhhhHHh
Confidence 344445566788887766554321 1122223333332111 11334578999999999999888777777776654
Q ss_pred h---cChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCCh---hhHhHHHHHHHHhhccCCCCcchhhHHHHHH
Q 004025 402 S---FSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQ---RTISGSLLKYLSKLQVDEEPAIRTNTTILLG 475 (778)
Q Consensus 402 ~---l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~---~~l~~~LL~~laklq~D~~~~IRtnt~icl~ 475 (778)
. .....++..+++.+...+.+.++.+|+.++..+..++-.-.+ ..++..+++.|-.+..+.++.||.+++.+|+
T Consensus 260 ~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~~~i~~li~~l~~~~~~v~~~a~~~l~ 339 (434)
T d1q1sc_ 260 GTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAIT 339 (434)
T ss_dssp SCHHHHHHHHHTTGGGGHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHSSCHHHHHHHHHHHH
T ss_pred hhhHHHHHHHhccccchHHHhhcccchhhhHHHHHHHhhhccccchhHHHHhhhhhHHHHHHHHhccChHHHHHHHHHHH
Confidence 3 334466778899999999999999999999998888753222 1234557788877777888999999999999
Q ss_pred Hhhhhcccccchhh----hHHHHHhhhhcCCCchhhhheeee
Q 004025 476 NIASHLNEGTRKRV----LINAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 476 kIa~~L~~~~~~~v----L~~af~~~~lkD~f~~~R~A~l~a 513 (778)
.++.+-+.+....+ +++.+. ..|.+.....+.+++.+
T Consensus 340 nl~~~~~~~~~~~l~~~~~i~~L~-~ll~~~d~~~~~~~l~~ 380 (434)
T d1q1sc_ 340 NYTSGGTVEQIVYLVHCGIIEPLM-NLLSAKDTKIIQVILDA 380 (434)
T ss_dssp HHHHHSCHHHHHHHHHTTCHHHHH-HHTTSSCHHHHHHHHHH
T ss_pred HHHhcCCHHHHHHHHHCCcHHHHH-HHhcCCCHHHHHHHHHH
Confidence 99988776554443 367787 88888888888887776
|
| >d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin beta species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.56 E-value=0.00022 Score=75.25 Aligned_cols=125 Identities=13% Similarity=0.134 Sum_probs=97.4
Q ss_pred hhhhHHHHHHhhc-------CChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccC
Q 004025 370 SVKVLPTIVKLFA-------SNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKL 442 (778)
Q Consensus 370 ~~~i~P~i~~lF~-------~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL 442 (778)
...+.|.+..... ..+..+|......+..+...++++.+ ..++|.+..++.+.+..+|++++.++..++...
T Consensus 318 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~~-~~l~~~i~~~l~s~~~~~r~aal~~l~~i~~~~ 396 (458)
T d1ibrb_ 318 LQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIV-PHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGP 396 (458)
T ss_dssp HHHHHHHHHHHTTCCCSSCCTTCCSHHHHHHHHHHHHHHHTTTTHH-HHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSS
T ss_pred HHHHhhhHHhhhhcchhhhccccccHHHHHHHHHHHHHHhccHhhh-hHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhc
Confidence 3445566666543 22336888888999999998887654 679999999999999999999999999988765
Q ss_pred Chhh---HhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccc-hhhhHHHHH
Q 004025 443 SQRT---ISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTR-KRVLINAFT 495 (778)
Q Consensus 443 ~~~~---l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~-~~vL~~af~ 495 (778)
.... ...++++.|..+..|+.+.||.+++.|||+|++++..... ..+|.+.+.
T Consensus 397 ~~~~~~~~l~~i~~~l~~~l~d~~~~VR~~a~~~l~~i~~~~~~~~~~~~~l~~ll~ 453 (458)
T d1ibrb_ 397 EPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAAINDVYLAPLLQ 453 (458)
T ss_dssp CTTTTCTTTTTHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHGGGGCCSTTTHHHHHH
T ss_pred CHhHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHH
Confidence 4332 3567999999999999999999999999999999976543 444444444
|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Cullin-associated NEDD8-dissociated protein 1 (Tip120) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.39 E-value=0.0011 Score=79.68 Aligned_cols=251 Identities=10% Similarity=0.095 Sum_probs=156.2
Q ss_pred hHHHHHHHhccCCCCCCChH-HHHhcccCCccccccc--cch-hhhhhH-HhhhcccCChhhHhHhhhhchhhhcCCChh
Q 004025 256 LLPDYQRLLSSMPSRRLNSS-KLIENSVGDFWMTEYF--QNK-LVDTIH-FMEILNLKDSVEKDTFFRKLPNLAEQLPRQ 330 (778)
Q Consensus 256 L~~~i~~lL~~dP~~Rps~~-~lL~~~~~~~w~~~ff--~n~-lv~~~~-~Le~l~~k~~~EK~~F~~~L~~~l~~fp~~ 330 (778)
+..++.+|-+.||.-|..+. ++++.-.. .++ .+. ..++.. .+.-+.-++++-+..-.+.|..+...+++.
T Consensus 5 ~~~ll~k~~~~D~d~R~ma~~dl~~~l~~-----~~~~~~~~~~~~i~~~ll~~L~D~~~~Vq~~A~k~l~~l~~~~~~~ 79 (1207)
T d1u6gc_ 5 ISNLLEKMTSSDKDFRFMATNDLMTELQK-----DSIKLDDDSERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKVKEY 79 (1207)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHHTSS-----SCCSCCTTHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHTTSCHH
T ss_pred HHHHHHhcCCCCHhHHHHHHHHHHHHHhh-----cccccChHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhCcHh
Confidence 44567788888888885442 33332110 122 111 111111 233344566666777777788777777765
Q ss_pred hhhhchHHHHHHHHhhCCCC-----chhhHHHHHh-ccCCCh----hhhhhhhHHHHHHhh-cCChHHHHHHHHHhHHHH
Q 004025 331 IVLKKLLPLLASALEFGSAA-----APALTALLKM-GSWLST----EEFSVKVLPTIVKLF-ASNDRAIRVALLQHIDQY 399 (778)
Q Consensus 331 ~~~~kILP~Ll~~~~~~~~~-----~~~L~~llki-~~~l~~----eef~~~i~P~i~~lF-~~~Dr~iR~~LL~~l~~~ 399 (778)
.. ..+++.|+..+...... ...|..++.. ...... ......+++.+.... ...+..+|...++-+..+
T Consensus 80 ~~-~~l~~~L~~~l~~~~~~~r~~~~~~L~~i~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~~al~~l~~l 158 (1207)
T d1u6gc_ 80 QV-ETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMADM 158 (1207)
T ss_dssp HH-HHHHHHHHHHTTCSSSHHHHHHHHHHHHHHHHCC-----CCTHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHHHH
T ss_pred hH-HHHHHHHHHHhcCCchhhhHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHH
Confidence 43 45677777766433221 1123333221 111111 223333444444433 345678999999999888
Q ss_pred HhhcChhhh--hhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHHHHHHHhhccCCCCcchhhHHHHHHHh
Q 004025 400 GQSFSAQVV--DEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNI 477 (778)
Q Consensus 400 ~~~l~~~~v--~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kI 477 (778)
+.+++.... ...|++.++..+.+.++.||..++.++-.++..++...+..-+-..+..+..+....+|-..+-||+.|
T Consensus 159 ~~~~g~~l~~~~~~il~~l~~~l~~~~~~vR~~A~~~l~~l~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~~~~~l~~l 238 (1207)
T d1u6gc_ 159 LSRQGGLLVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGNIVFVDLIEHLLSELSKNDSMSTTRTYIQCIAAI 238 (1207)
T ss_dssp HHHTCSSCTTTHHHHHHHHGGGGGCSSHHHHHHHHHHHHHHTTTC----CTTHHHHHHHHHHHTCSSCSCTTHHHHHHHH
T ss_pred HHHhhHhhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHH
Confidence 888876432 356899999999999999999999999999999988766544444555666778888888899999999
Q ss_pred hhhcccccch--hhhHHHHHhhhhcCCCchhhhheeee
Q 004025 478 ASHLNEGTRK--RVLINAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 478 a~~L~~~~~~--~vL~~af~~~~lkD~f~~~R~A~l~a 513 (778)
+...+..... .-+++... +.+.+.....|.+++.+
T Consensus 239 ~~~~~~~~~~~l~~i~~~l~-~~l~~~~~~~r~~al~~ 275 (1207)
T d1u6gc_ 239 SRQAGHRIGEYLEKIIPLVV-KFCNVDDDELREYCIQA 275 (1207)
T ss_dssp HHHSSGGGTTSCTTHHHHHH-HHHSSCCTTTHHHHHHH
T ss_pred HHHcchhhHHHHHHHHHHHH-HHhcCccHHHHHHHHHH
Confidence 9877653322 34577777 78999999999888776
|
| >d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: PBS lyase HEAT-like repeat domain: Hypothetical protein YibA species: Escherichia coli [TaxId: 562]
Probab=97.34 E-value=0.00065 Score=66.90 Aligned_cols=144 Identities=11% Similarity=0.030 Sum_probs=107.9
Q ss_pred hHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHHH
Q 004025 373 VLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLL 452 (778)
Q Consensus 373 i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~LL 452 (778)
....|++++.++|..||...+..|-.+.. +..+|.++..+.|.++.+|..++.++..+...-.... ..+-
T Consensus 20 ~~~~L~~~L~d~~~~vR~~A~~~L~~~~~--------~~~~~~l~~~l~d~~~~vr~~a~~aL~~l~~~~~~~~--~~~~ 89 (276)
T d1oyza_ 20 NDDELFRLLDDHNSLKRISSARVLQLRGG--------QDAVRLAIEFCSDKNYIRRDIGAFILGQIKICKKCED--NVFN 89 (276)
T ss_dssp CHHHHHHHTTCSSHHHHHHHHHHHHHHCC--------HHHHHHHHHHHTCSSHHHHHHHHHHHHHSCCCTTTHH--HHHH
T ss_pred CHHHHHHHhcCCCHHHHHHHHHHHHhhCC--------HhHHHHHHHHHcCCCHHHHHHHHHHHHHhcccccccc--chHH
Confidence 35668899999999999999998876642 3467999999999999999999999887754332211 1122
Q ss_pred HHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhhheeee--cc---------------
Q 004025 453 KYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL--SY--------------- 515 (778)
Q Consensus 453 ~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~l~a--~~--------------- 515 (778)
.++..+..|+++.||.+.+.+|++++..-. .....+++.+. ..+.|+.+..|.+++.+ .+
T Consensus 90 ~l~~~~l~d~~~~vr~~a~~aL~~~~~~~~--~~~~~~~~~l~-~~~~d~~~~vr~~a~~~l~~~~~~~~~~~l~~l~~~ 166 (276)
T d1oyza_ 90 ILNNMALNDKSACVRATAIESTAQRCKKNP--IYSPKIVEQSQ-ITAFDKSTNVRRATAFAISVINDKATIPLLINLLKD 166 (276)
T ss_dssp HHHHHHHHCSCHHHHHHHHHHHHHHHHHCG--GGHHHHHHHHH-HHTTCSCHHHHHHHHHHHHTC---CCHHHHHHHHTC
T ss_pred HHHHHHhcCCChhHHHHHHHHHHHHccccc--hhhHHHHHHHH-HHhcCcchHHHHHHHHHHhhcchHHHHHHHHHhccc
Confidence 234555679999999999999999987643 23456788888 89999999999888876 11
Q ss_pred CCHHHHHHHHHHHH
Q 004025 516 LNCDVRSKAFQAVD 529 (778)
Q Consensus 516 ~~~~VR~~a~~~~~ 529 (778)
.+..||..+...+.
T Consensus 167 ~~~~~~~~~~~~~~ 180 (276)
T d1oyza_ 167 PNGDVRNWAAFAIN 180 (276)
T ss_dssp SSHHHHHHHHHHHH
T ss_pred ccchhhhhHHHHHH
Confidence 56667776665554
|
| >d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.11 E-value=0.0012 Score=69.35 Aligned_cols=205 Identities=15% Similarity=0.165 Sum_probs=145.9
Q ss_pred hhhhchHHHHHHHHhhCCCCc---hhhH----HHHHhcc---CCChhhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHH
Q 004025 331 IVLKKLLPLLASALEFGSAAA---PALT----ALLKMGS---WLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYG 400 (778)
Q Consensus 331 ~~~~kILP~Ll~~~~~~~~~~---~~L~----~llki~~---~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~ 400 (778)
+.....++.|+..+....... ..+. .+..+.. ....-++...++|.++.+....|..++...+.-+..+.
T Consensus 137 i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~l~~ll~~~~~~~~~~a~~~l~~l~ 216 (434)
T d1q1sc_ 137 VIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLT 216 (434)
T ss_dssp HHHTTCHHHHHHHTCSSCGGGSCHHHHHHHHHHHHHHTCCCTTCCCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHT
T ss_pred HHHhhhhhHHHHHHHhcccccchHHHHHHHHHHHHHHhhcccccchhhhhhhHHHHHHHHHhccccchhhhHHhhhcccc
Confidence 455567777777766543221 1111 1222222 22334566778999999999999999988887777776
Q ss_pred hhcC---hhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCCh---hhHhHHHHHHHHhhccCCCCcchhhHHHHH
Q 004025 401 QSFS---AQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQ---RTISGSLLKYLSKLQVDEEPAIRTNTTILL 474 (778)
Q Consensus 401 ~~l~---~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~---~~l~~~LL~~laklq~D~~~~IRtnt~icl 474 (778)
.+-+ ...+...++|.++..+.+.++.+++.+++.+..++..-++ ..++..+++.|.++..++.+.||..++.+|
T Consensus 217 ~~~~~~~~~~~~~~~~~~Lv~ll~~~~~~~~~~al~~l~~l~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~~a~~~L 296 (434)
T d1q1sc_ 217 DGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTM 296 (434)
T ss_dssp SSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGHHHHTTCSSHHHHHHHHHHH
T ss_pred hhhhhhHHHHhhcccchhcccccccchhhhhhchhhhhhhHHhhhhHHHHHHHhccccchHHHhhcccchhhhHHHHHHH
Confidence 5432 2234567999999999999999999999999888753222 334566777888888888999999999999
Q ss_pred HHhhhhcccc---cchhhhHHHHHhhhhcCCCchhhhheeee--c---c------------------------CCHHHHH
Q 004025 475 GNIASHLNEG---TRKRVLINAFTVRALRDTFSPARGAAKIL--S---Y------------------------LNCDVRS 522 (778)
Q Consensus 475 ~kIa~~L~~~---~~~~vL~~af~~~~lkD~f~~~R~A~l~a--~---~------------------------~~~~VR~ 522 (778)
+.|+..-... -.+.-+++.+. +.+.++....|.+++.+ . + .+.+++.
T Consensus 297 ~~l~~~~~~~~~~i~~~~~i~~li-~~l~~~~~~v~~~a~~~l~nl~~~~~~~~~~~l~~~~~i~~L~~ll~~~d~~~~~ 375 (434)
T d1q1sc_ 297 SNITAGRQDQIQQVVNHGLVPFLV-GVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQ 375 (434)
T ss_dssp HHHTTSCHHHHHHHHHTTCHHHHH-HHHHSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHHHHTTSSCHHHHH
T ss_pred hhhccccchhHHHHhhhhhHHHHH-HHHhccChHHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHHHHHhcCCCHHHHH
Confidence 9998643221 12233678888 89999999999999887 0 0 7888999
Q ss_pred HHHHHHHHHHHHHH
Q 004025 523 KAFQAVDQFLQIVK 536 (778)
Q Consensus 523 ~a~~~~~~~l~~l~ 536 (778)
.|.+++..+++..+
T Consensus 376 ~~l~~l~~ll~~~~ 389 (434)
T d1q1sc_ 376 VILDAISNIFQAAE 389 (434)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99998888876554
|
| >d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: PBS lyase HEAT-like repeat domain: MTH187 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=97.09 E-value=0.0003 Score=60.58 Aligned_cols=86 Identities=14% Similarity=0.100 Sum_probs=68.4
Q ss_pred cchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhhh
Q 004025 411 QVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVL 490 (778)
Q Consensus 411 ~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL 490 (778)
..++.++.++.|.++.||..++.++..+. ..+.++.|.++..|+++.||.+++.+||+|.. .-.
T Consensus 22 ~~~~~L~~~l~d~~~~vR~~a~~~L~~~~--------~~~~~~~L~~~l~d~~~~VR~~a~~aL~~i~~--------~~~ 85 (111)
T d1te4a_ 22 EAFEPLLESLSNEDWRIRGAAAWIIGNFQ--------DERAVEPLIKLLEDDSGFVRSGAARSLEQIGG--------ERV 85 (111)
T ss_dssp TTHHHHHHGGGCSCHHHHHHHHHHHGGGC--------SHHHHHHHHHHHHHCCTHHHHHHHHHHHHHCS--------HHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHhcc--------hhhhHHHHHhhhccchhHHHHHHHHHHHHhCc--------cch
Confidence 45678889999999999999999886443 23456677777789999999999999999863 234
Q ss_pred HHHHHhhhhcCCCchhhhheeee
Q 004025 491 INAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 491 ~~af~~~~lkD~f~~~R~A~l~a 513 (778)
++.+. +.++|+....|.+|+.+
T Consensus 86 ~~~L~-~ll~d~~~~vr~~A~~a 107 (111)
T d1te4a_ 86 RAAME-KLAETGTGFARKVAVNY 107 (111)
T ss_dssp HHHHH-HHTTSCCTHHHHHHHHH
T ss_pred HHHHH-HHHcCCCHHHHHHHHHH
Confidence 67777 89999998888887764
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=97.06 E-value=0.001 Score=65.77 Aligned_cols=76 Identities=4% Similarity=-0.056 Sum_probs=45.0
Q ss_pred CceeccCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEecccccCC
Q 004025 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATS 97 (778)
Q Consensus 20 ~Y~i~~~lg~g~-g~w~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e~~~g~~ 97 (778)
+|.+.+....++ . .||+.. .++..+.||........ ....+.+|+..|+.|. +=-+.+++...+.+
T Consensus 15 ~~~~~~~~~G~s~~--~v~rv~--~~~~~~vlk~~~~~~~~--~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~------ 82 (263)
T d1j7la_ 15 KYRCVKDTEGMSPA--KVYKLV--GENENLYLKMTDSRYKG--TTYDVEREKDMMLWLEGKLPVPKVLHFERHD------ 82 (263)
T ss_dssp TSEEEECSCCCSSS--EEEEEE--CSSCEEEEEEECGGGTT--STTCHHHHHHHHHHHTTTSCCCCEEEEEEET------
T ss_pred ceEEEEcCCCCCCC--cEEEEE--eCCCeEEEEEcCCCccc--chhhHHHHHHHHHHHhccCCCCcEEEEEecC------
Confidence 466655543333 4 788765 35677888887643211 1223566777777664 22245566655543
Q ss_pred cccEEEEEecCC
Q 004025 98 TKITIYIVTEPV 109 (778)
Q Consensus 98 ~~~~lyIVtE~v 109 (778)
...|+|||++
T Consensus 83 --~~~~lv~~~l 92 (263)
T d1j7la_ 83 --GWSNLLMSEA 92 (263)
T ss_dssp --TEEEEEEECC
T ss_pred --CceEEEEEec
Confidence 3789999999
|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Cullin-associated NEDD8-dissociated protein 1 (Tip120) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.97 E-value=0.0051 Score=73.59 Aligned_cols=200 Identities=14% Similarity=0.130 Sum_probs=130.7
Q ss_pred hhchHHHHHHHHhhCCCC--chhhHHHHHhccCCChhhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhh---
Q 004025 333 LKKLLPLLASALEFGSAA--APALTALLKMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQV--- 407 (778)
Q Consensus 333 ~~kILP~Ll~~~~~~~~~--~~~L~~llki~~~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~--- 407 (778)
..+|++.|++.++..+.- ..++..+-.+...++.+.. ..+++.+.......+..+|-....-|..++..++...
T Consensus 43 ~~~i~~~ll~~L~D~~~~Vq~~A~k~l~~l~~~~~~~~~-~~l~~~L~~~l~~~~~~~r~~~~~~L~~i~~~l~~~~~~~ 121 (1207)
T d1u6gc_ 43 ERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKVKEYQV-ETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPASSGS 121 (1207)
T ss_dssp HHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHTTSCHHHH-HHHHHHHHHHTTCSSSHHHHHHHHHHHHHHHHCC-----C
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhCcHhhH-HHHHHHHHHHhcCCchhhhHHHHHHHHHHHHhcccccccc
Confidence 567999999998765421 1223333344556665543 5566777666555555556444445555565554332
Q ss_pred -----hhhcchHHHHhhcC-CCcHHHHHHHHHHHHhhhccCChh--hHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhh
Q 004025 408 -----VDEQVYPHVATGFA-DTSAFLREMTLKSMLVLAPKLSQR--TISGSLLKYLSKLQVDEEPAIRTNTTILLGNIAS 479 (778)
Q Consensus 408 -----v~~~I~P~l~~gf~-Dt~~~iRe~tlksi~~l~pkL~~~--~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~ 479 (778)
+...|.+.+..... ..+..+|..++..+..++..+... .....+++.|.....|+.+.||-.++.||+.++.
T Consensus 122 ~~~~~~~~~l~~~l~~~~~~~~~~~v~~~al~~l~~l~~~~g~~l~~~~~~il~~l~~~l~~~~~~vR~~A~~~l~~l~~ 201 (1207)
T d1u6gc_ 122 ALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQGGLLVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHLVM 201 (1207)
T ss_dssp CTHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHHHHHHHTCSSCTTTHHHHHHHHGGGGGCSSHHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 23345555555544 456789999998888877766532 2245788888887789999999999999999999
Q ss_pred hcccccchhhhHHHHHhhhhcCCCchhhhheeee-------------cc--------------CCHHHHHHHHHHHHHHH
Q 004025 480 HLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL-------------SY--------------LNCDVRSKAFQAVDQFL 532 (778)
Q Consensus 480 ~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~l~a-------------~~--------------~~~~VR~~a~~~~~~~l 532 (778)
+++...-..++-..+. ...++.....|.+++.. .| .+.+||+.|..+++.++
T Consensus 202 ~~~~~~~~~~~~~ll~-~l~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~l~~i~~~l~~~l~~~~~~~r~~al~~l~~l~ 280 (1207)
T d1u6gc_ 202 SCGNIVFVDLIEHLLS-ELSKNDSMSTTRTYIQCIAAISRQAGHRIGEYLEKIIPLVVKFCNVDDDELREYCIQAFESFV 280 (1207)
T ss_dssp TC----CTTHHHHHHH-HHHHTCSSCSCTTHHHHHHHHHHHSSGGGTTSCTTHHHHHHHHHSSCCTTTHHHHHHHHHHHH
T ss_pred HCCHHHHHHHHHHHHH-HHccCCCHHHHHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHH
Confidence 9998777776666665 55567777777665544 11 67889999999999887
Q ss_pred HH
Q 004025 533 QI 534 (778)
Q Consensus 533 ~~ 534 (778)
..
T Consensus 281 ~~ 282 (1207)
T d1u6gc_ 281 RR 282 (1207)
T ss_dssp HC
T ss_pred Hh
Confidence 54
|
| >d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin beta species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.95 E-value=0.016 Score=65.78 Aligned_cols=221 Identities=11% Similarity=0.118 Sum_probs=150.9
Q ss_pred HhHhhhhchhhhcCCChhhhh---hchHHHHHHHHhhCCCCch----hhHHHHHhccCC----ChhhhhhhhHHHHHHhh
Q 004025 313 KDTFFRKLPNLAEQLPRQIVL---KKLLPLLASALEFGSAAAP----ALTALLKMGSWL----STEEFSVKVLPTIVKLF 381 (778)
Q Consensus 313 K~~F~~~L~~~l~~fp~~~~~---~kILP~Ll~~~~~~~~~~~----~L~~llki~~~l----~~eef~~~i~P~i~~lF 381 (778)
+...+.-|..+.+.+...... ..|+|.++..+........ ++..+..+...+ ..+.+...++..+..+.
T Consensus 147 ~~~~l~~l~~i~~~~~~~~~~~~~~~il~~i~~~l~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~~~ 226 (876)
T d1qgra_ 147 KESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEAT 226 (876)
T ss_dssp HHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHSTTCSCHHHHHHHHHHHHHHGGGCHHHHTSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHh
Confidence 434444455555544443322 3467888777754432221 222222222222 33456667888888999
Q ss_pred cCChHHHHHHHHHhHHHHHhhcChh---hhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhcc-----------------
Q 004025 382 ASNDRAIRVALLQHIDQYGQSFSAQ---VVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPK----------------- 441 (778)
Q Consensus 382 ~~~Dr~iR~~LL~~l~~~~~~l~~~---~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pk----------------- 441 (778)
..+|..+|...++.|..+++..+.. .+.+.+++.+..++.+.+..++..++..+..++..
T Consensus 227 ~~~~~~v~~~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 306 (876)
T d1qgra_ 227 QCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRP 306 (876)
T ss_dssp TCSSHHHHHHHHHHHHHHHHHSGGGCHHHHTTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred cCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhhh
Confidence 9999999999999999988877654 34567888899999999999888877665555421
Q ss_pred ------CChhhHhHHHHHHHHhhcc-------CCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhh
Q 004025 442 ------LSQRTISGSLLKYLSKLQV-------DEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARG 508 (778)
Q Consensus 442 ------L~~~~l~~~LL~~laklq~-------D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~ 508 (778)
.-.....+.+++.+..+.. |++..+|..+..|+..++..++... -..+++.+. ..+.++.|..|.
T Consensus 307 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~-~~~~~~~i~-~~l~~~~~~~r~ 384 (876)
T d1qgra_ 307 PEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDI-VPHVLPFIK-EHIKNPDWRYRD 384 (876)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHHHTTCCCSSCCTTCCCHHHHHHHHHHHHHHHHGGGG-HHHHHHHHH-HHTTCSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHhcccccccccchHHHHHHHHHHHHHHHhhhhh-hhhhHHHHH-HhhccchHHHHH
Confidence 1123345667777766543 2345699999999999999987654 456788888 999999999999
Q ss_pred heeee-----c---------c--------------CCHHHHHHHHHHHHHHHHHH
Q 004025 509 AAKIL-----S---------Y--------------LNCDVRSKAFQAVDQFLQIV 535 (778)
Q Consensus 509 A~l~a-----~---------~--------------~~~~VR~~a~~~~~~~l~~l 535 (778)
|++.+ . + ++..||..|..++..+.+.+
T Consensus 385 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~ 439 (876)
T d1qgra_ 385 AAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELL 439 (876)
T ss_dssp HHHHHHHHTSSSSCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHc
Confidence 98776 0 0 78899999998888776654
|
| >d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Karyopherin beta2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.77 E-value=0.00085 Score=78.42 Aligned_cols=125 Identities=14% Similarity=0.150 Sum_probs=98.2
Q ss_pred HHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChh--hHhHHHHHHHHhhccCCCC
Q 004025 387 AIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQR--TISGSLLKYLSKLQVDEEP 464 (778)
Q Consensus 387 ~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~--~l~~~LL~~laklq~D~~~ 464 (778)
.+|.+...-|..+...++++.+ ..++|.+...+.+.+..+||.++.++-.++....+. ....+++++|..+..|+.+
T Consensus 372 ~~r~~a~~~L~~l~~~~~~~il-~~~l~~l~~~l~s~~~~~reaa~~alg~i~eg~~~~~~~~l~~li~~l~~~l~d~~~ 450 (888)
T d1qbkb_ 372 NLRKCSAAALDVLANVYRDELL-PHILPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKA 450 (888)
T ss_dssp SSHHHHHHHSTTTTTTCCSSSH-HHHHHHHHHTTTSSSHHHHHHHHHHHHHHTTTSHHHHTTTHHHHHHHHHHHTTSSCH
T ss_pred hHHHHHHHHHhhHhhhhHHHHH-HHHHHHHHHhhccchhHHHHHHHHHhhhhhhhHHHHhcccchhhhHHHHHhccCCCH
Confidence 4566666666666776666544 668899999999999999999999988887655432 2246788999998899999
Q ss_pred cchhhHHHHHHHhhhhcccccch---hhhHHHHHhhhhcCCCchhhhheeee
Q 004025 465 AIRTNTTILLGNIASHLNEGTRK---RVLINAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 465 ~IRtnt~icl~kIa~~L~~~~~~---~vL~~af~~~~lkD~f~~~R~A~l~a 513 (778)
.||..++.|||+++.++...... .-+++.+. ..+.|+.++.|.+|..+
T Consensus 451 ~Vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~~ll-~~l~d~~~~V~~~a~~a 501 (888)
T d1qbkb_ 451 LVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELL-KRILDSNKRVQEAACSA 501 (888)
T ss_dssp HHHHHHHHHHHHTHHHHHSSCHHHHTTTHHHHHH-HHHSSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHH-HHhcCCCHHHHHHHHHH
Confidence 99999999999999988654332 33566666 78999999999998887
|
| >d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Karyopherin alpha species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.66 E-value=0.0043 Score=66.99 Aligned_cols=170 Identities=16% Similarity=0.174 Sum_probs=125.8
Q ss_pred hhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcC---hhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCC
Q 004025 367 EEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFS---AQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLS 443 (778)
Q Consensus 367 eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~---~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~ 443 (778)
-+....++|.++.++...|..++...+.-|..+.+.-+ ...++..+++.++..+...+..++..+++++-.++-.-+
T Consensus 241 ~~~~~~~l~~l~~~l~~~d~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~~al~~l~nl~~~~~ 320 (503)
T d1wa5b_ 241 WSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGND 320 (503)
T ss_dssp HHHHGGGHHHHHHHTTCCCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCH
T ss_pred HHHHHHHHHHHHHHhccccHHHHHHHHHHHHhhccCCchhhhhhhhhhhhhhhhhcccCCchhhhhhHHHHHHHHHHHHH
Confidence 34566789999999999999988877777777765443 235677899999999999999999999999988875433
Q ss_pred h---hhHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccc----hhhhHHHHHhhhhcCCCchhhhheeee--c
Q 004025 444 Q---RTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTR----KRVLINAFTVRALRDTFSPARGAAKIL--S 514 (778)
Q Consensus 444 ~---~~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~----~~vL~~af~~~~lkD~f~~~R~A~l~a--~ 514 (778)
. ..++..+++.|.++...+.+.||-.++-||+.|+.. +++.+ ..-+++.+. ..|..+....|.+++.+ .
T Consensus 321 ~~~~~~~~~~~l~~l~~ll~~~~~~i~~~~~~~l~nl~~~-~~~~~~~i~~~~~l~~li-~~l~~~~~~v~~~a~~~l~n 398 (503)
T d1wa5b_ 321 LQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAG-NTEQIQAVIDANLIPPLV-KLLEVAEYKTKKEACWAISN 398 (503)
T ss_dssp HHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTS-CHHHHHHHHHTTCHHHHH-HHHHHSCHHHHHHHHHHHHH
T ss_pred HHHHhhhccchHHHHHHHhcCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHHccccchhH-HhcccCChhHHHHHHHHHHH
Confidence 2 224556889999998888899999999999999753 22222 223456666 77888888888888776 0
Q ss_pred -------------c----------------CCHHHHHHHHHHHHHHHHHHHHH
Q 004025 515 -------------Y----------------LNCDVRSKAFQAVDQFLQIVKQY 538 (778)
Q Consensus 515 -------------~----------------~~~~VR~~a~~~~~~~l~~l~~~ 538 (778)
+ .+..+...+.+++..+++..+..
T Consensus 399 l~~~~~~~~~~~~~l~~~~~l~~l~~~L~~~d~~~~~~~L~~l~~ll~~~~~~ 451 (503)
T d1wa5b_ 399 ASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMGEAD 451 (503)
T ss_dssp HHHHTTTCTHHHHHHHHTTCHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcccccHHHHHHHHHCCcHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0 67777777777777777655543
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=96.62 E-value=0.0024 Score=67.67 Aligned_cols=29 Identities=17% Similarity=0.211 Sum_probs=25.0
Q ss_pred CCccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 148 CKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 148 ~~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
..++|||+.+.|||+++++ ++|+||+++.
T Consensus 223 ~~LiHGDl~~gNIlv~~~~-~~vID~E~a~ 251 (392)
T d2pula1 223 ETLIHGDLHTGSIFASEHE-TKVIDPEFAF 251 (392)
T ss_dssp CEEECSCCCGGGEEECSSC-EEECCCTTCE
T ss_pred cceeccCCcCCceeEcCCc-eEEechhhcc
Confidence 3699999999999998765 8999999865
|
| >d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Karyopherin alpha species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.44 E-value=0.0065 Score=65.51 Aligned_cols=187 Identities=14% Similarity=0.094 Sum_probs=125.8
Q ss_pred CCChhhhhhchHHHHHHHHhhCCCC--chhhHHHHHhccCCC---hhhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHH
Q 004025 326 QLPRQIVLKKLLPLLASALEFGSAA--APALTALLKMGSWLS---TEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYG 400 (778)
Q Consensus 326 ~fp~~~~~~kILP~Ll~~~~~~~~~--~~~L~~llki~~~l~---~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~ 400 (778)
..+.......++|.|++.+...+.- ..++..+..++..-. ..-+...+++.++.++...+..++...+.-+-.+.
T Consensus 237 ~~~~~~~~~~~l~~l~~~l~~~d~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~~al~~l~nl~ 316 (503)
T d1wa5b_ 237 PQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIV 316 (503)
T ss_dssp SCCCHHHHGGGHHHHHHHTTCCCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHhhccCCchhhhhhhhhhhhhhhhhcccCCchhhhhhHHHHHHHHH
Confidence 4455556667899998887654321 112223333333221 12345578899999999999988877777666665
Q ss_pred hhc---ChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccC---ChhhHhHHHHHHHHhhccCCCCcchhhHHHHH
Q 004025 401 QSF---SAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKL---SQRTISGSLLKYLSKLQVDEEPAIRTNTTILL 474 (778)
Q Consensus 401 ~~l---~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL---~~~~l~~~LL~~laklq~D~~~~IRtnt~icl 474 (778)
..- ....++..+++.+...+.+.++.||+.++.++..++-.= -...++..+++.|..+.....+.||..++.||
T Consensus 317 ~~~~~~~~~~~~~~~l~~l~~ll~~~~~~i~~~~~~~l~nl~~~~~~~~~~i~~~~~l~~li~~l~~~~~~v~~~a~~~l 396 (503)
T d1wa5b_ 317 TGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAEYKTKKEACWAI 396 (503)
T ss_dssp TSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred HHHHHHHHhhhccchHHHHHHHhcCCCHHHHHHHHHHHHHHhhccHHHHHHHHHccccchhHHhcccCChhHHHHHHHHH
Confidence 432 223456678999999999999999999999998876421 12234556778887777777889999999999
Q ss_pred HHhhhhcccc--cc----hhhhHHHHHhhhhcCCCchhhhheeee
Q 004025 475 GNIASHLNEG--TR----KRVLINAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 475 ~kIa~~L~~~--~~----~~vL~~af~~~~lkD~f~~~R~A~l~a 513 (778)
..++.+-... .. +.=++.++. ..|+........++|.+
T Consensus 397 ~nl~~~~~~~~~~~~~l~~~~~l~~l~-~~L~~~d~~~~~~~L~~ 440 (503)
T d1wa5b_ 397 SNASSGGLQRPDIIRYLVSQGCIKPLC-DLLEIADNRIIEVTLDA 440 (503)
T ss_dssp HHHHHHTTTCTHHHHHHHHTTCHHHHH-HHTTTCCHHHHHHHHHH
T ss_pred HHHHhcccccHHHHHHHHHCCcHHHHH-HHhcCCCHHHHHHHHHH
Confidence 9998765431 11 122456677 78887777777776655
|
| >d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HspBP1 domain domain: Hsp70-binding protein 1 (HspBP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.42 E-value=0.0038 Score=61.84 Aligned_cols=137 Identities=12% Similarity=0.137 Sum_probs=105.0
Q ss_pred HHHHHhhcCChHHHHHHHHHhHHHHHhhcC---hhhhhhcchHHHHhhcC-CCcHHHHHHHHHHHHhhhccCChhh---H
Q 004025 375 PTIVKLFASNDRAIRVALLQHIDQYGQSFS---AQVVDEQVYPHVATGFA-DTSAFLREMTLKSMLVLAPKLSQRT---I 447 (778)
Q Consensus 375 P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~---~~~v~~~I~P~l~~gf~-Dt~~~iRe~tlksi~~l~pkL~~~~---l 447 (778)
+.|..+..+.+..||...+.-|..+..+-+ ...+...++|.++..+. +.++.+|+.++.++..++..-.... +
T Consensus 62 ~ll~~ll~s~~~~vr~~A~~~L~~l~~~~~~~~~~~~~~~~i~~Lv~lL~~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~ 141 (264)
T d1xqra1 62 LLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLLQFL 141 (264)
T ss_dssp HHHHTTTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHhhcCCCHHHHHHHHHHHHHHhccchhhHHHHH
Confidence 344557778888999888887777776543 34566788999999985 7789999999999998886554322 3
Q ss_pred hHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhh----hHHHHHhhhhcCCCchhhhheeee
Q 004025 448 SGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRV----LINAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 448 ~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~v----L~~af~~~~lkD~f~~~R~A~l~a 513 (778)
....++.|.++..+....+|.+++-+|+.++.. +++.+..+ .++++. ..|+++....|..++.+
T Consensus 142 ~~~gi~~L~~lL~~~~~~~~~~a~~~L~~l~~~-~~~~~~~~~~~~~v~~L~-~lL~~~~~~~~~~a~~a 209 (264)
T d1xqra1 142 RLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVG-HPEHKGTLCSMGMVQQLV-ALVRTEHSPFHEHVLGA 209 (264)
T ss_dssp HTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHH-CGGGHHHHHHTTHHHHHH-HHHTSCCSTHHHHHHHH
T ss_pred HhhhhhHHHHHHhcCchHHHHHHHHHHHHHHhc-cHHHHHHHHHhhhHHHHH-HHHcCCCHHHHHHHHHH
Confidence 445678888888888899999999999999865 23333333 378888 89999999999999888
|
| >d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin beta species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.24 E-value=0.014 Score=66.41 Aligned_cols=140 Identities=10% Similarity=0.114 Sum_probs=105.3
Q ss_pred hhHHHHHHhhcCCh--HHHHHHHHHhHHHHHhhcChhhhh---hcchHHHHhhcCC--CcHHHHHHHHHHHHhhhccCCh
Q 004025 372 KVLPTIVKLFASND--RAIRVALLQHIDQYGQSFSAQVVD---EQVYPHVATGFAD--TSAFLREMTLKSMLVLAPKLSQ 444 (778)
Q Consensus 372 ~i~P~i~~lF~~~D--r~iR~~LL~~l~~~~~~l~~~~v~---~~I~P~l~~gf~D--t~~~iRe~tlksi~~l~pkL~~ 444 (778)
.++|.|+..+.++| ..+|...|.-|..+.+.+..+.+. +.|++.++.++.+ .+..+|..+++++..+...+..
T Consensus 128 eli~~L~~~l~~~~~~~~~~~~~l~~l~~i~~~~~~~~~~~~~~~il~~i~~~l~~~~~~~~v~~~a~~~l~~~~~~~~~ 207 (876)
T d1qgra_ 128 ELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKA 207 (876)
T ss_dssp THHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHSTTCSCHHHHHHHHHHHHHHGGGCHH
T ss_pred HHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHHHHHhhh
Confidence 47888888887766 467877777787787777765443 4589999999864 4578999999999887766654
Q ss_pred h----hHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhccccc---chhhhHHHHHhhhhcCCCchhhhheee
Q 004025 445 R----TISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGT---RKRVLINAFTVRALRDTFSPARGAAKI 512 (778)
Q Consensus 445 ~----~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~---~~~vL~~af~~~~lkD~f~~~R~A~l~ 512 (778)
. .....+++.+..+..++++.+|.++..||.+|........ ...++...+. .++++.....+..++.
T Consensus 208 ~~~~~~~~~~i~~~l~~~~~~~~~~v~~~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~ 281 (876)
T d1qgra_ 208 NFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITI-EAMKSDIDEVALQGIE 281 (876)
T ss_dssp HHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSGGGCHHHHTTTHHHHHH-HHHTCSSHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH-HHhccccHHHHHHHHH
Confidence 3 3455678888888888899999999999999998876533 2345566666 7788887777766553
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=96.24 E-value=0.01 Score=57.90 Aligned_cols=30 Identities=20% Similarity=0.308 Sum_probs=25.4
Q ss_pred CccccccCCCCeEEcCCCcEEEEecccccc
Q 004025 149 KLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (778)
Q Consensus 149 ~ivH~dLkp~NI~v~~~g~~KL~dFgla~~ 178 (778)
.++|||+.|.||+++.++..-|+||+.+..
T Consensus 176 ~liHgD~~~~Nvl~~~~~~~~iID~~~~~~ 205 (255)
T d1nd4a_ 176 VVTHGDACLPNIMVENGRFSGFIDCGRLGV 205 (255)
T ss_dssp EEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred eEEeCCCCCcceEEeCCceEEEEEchhccc
Confidence 389999999999999876677999997653
|
| >d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin beta species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.09 E-value=0.048 Score=61.31 Aligned_cols=169 Identities=10% Similarity=0.113 Sum_probs=123.7
Q ss_pred hhhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhh---hhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccC
Q 004025 366 TEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQV---VDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKL 442 (778)
Q Consensus 366 ~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~---v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL 442 (778)
...+...+++.+...+..+|..+|...++.+..+++..+... +.+-++..+..++.+.++.+|..++..+..++...
T Consensus 218 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~v~~~~~~~l~~l~~~~ 297 (861)
T d2bpta1 218 REGERNYLMQVVCEATQAEDIEVQAAAFGCLCKIMSKYYTFMKPYMEQALYALTIATMKSPNDKVASMTVEFWSTICEEE 297 (861)
T ss_dssp SHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHGGGCHHHHHHTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhHHHHhHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHH
Confidence 345667788889999999999999999999998888776543 33445566678899999999998887665554321
Q ss_pred Ch-------------------hhHhHHHHHHHHhhcc-------CCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHh
Q 004025 443 SQ-------------------RTISGSLLKYLSKLQV-------DEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTV 496 (778)
Q Consensus 443 ~~-------------------~~l~~~LL~~laklq~-------D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~ 496 (778)
.. .....++++.+..+.. |.+..+|.....||..++..++... -..+.+...
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~- 375 (861)
T d2bpta1 298 IDIAYELAQFPQSPLQSYNFALSSIKDVVPNLLNLLTRQNEDPEDDDWNVSMSAGACLQLFAQNCGNHI-LEPVLEFVE- 375 (861)
T ss_dssp HHHHHHHHHCTTCSCCCCCHHHHHHHHHHHHHHHHTTCCCCC-CCCCCHHHHHHHHHHHHHHHHHGGGG-HHHHHHHHH-
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHhhcchhh-hhhhcchhh-
Confidence 10 1123345555554432 2345799999999999999988654 344566667
Q ss_pred hhhcCCCchhhhheeee-----c---------c--------------CCHHHHHHHHHHHHHHHHHHH
Q 004025 497 RALRDTFSPARGAAKIL-----S---------Y--------------LNCDVRSKAFQAVDQFLQIVK 536 (778)
Q Consensus 497 ~~lkD~f~~~R~A~l~a-----~---------~--------------~~~~VR~~a~~~~~~~l~~l~ 536 (778)
..+.+..+..|.|++.+ . | .+..||+.|..++..+.+.+.
T Consensus 376 ~~~~~~~~~~~~~a~~~l~~i~~~~~~~~~~~~l~~~l~~l~~~l~d~~~~vr~~a~~~l~~l~~~~~ 443 (861)
T d2bpta1 376 QNITADNWRNREAAVMAFGSIMDGPDKVQRTYYVHQALPSILNLMNDQSLQVKETTAWCIGRIADSVA 443 (861)
T ss_dssp HHTTCSSHHHHHHHHHHHHHTSSSSCHHHHHHHHHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHG
T ss_pred hhhhhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhcCcchhhhhHHHHHHHHHHHHhc
Confidence 78899999999999887 0 0 788999999999988877654
|
| >d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: PBS lyase HEAT-like repeat domain: MTH187 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=95.84 E-value=0.0055 Score=52.18 Aligned_cols=86 Identities=17% Similarity=0.193 Sum_probs=68.5
Q ss_pred hHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHHH
Q 004025 373 VLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLL 452 (778)
Q Consensus 373 i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~LL 452 (778)
.++.+++++.+.|..||...+.-|-.+ -. ....|.+..++.|.++.||..++.++-.+- ..+.+
T Consensus 23 ~~~~L~~~l~d~~~~vR~~a~~~L~~~---~~-----~~~~~~L~~~l~d~~~~VR~~a~~aL~~i~--------~~~~~ 86 (111)
T d1te4a_ 23 AFEPLLESLSNEDWRIRGAAAWIIGNF---QD-----ERAVEPLIKLLEDDSGFVRSGAARSLEQIG--------GERVR 86 (111)
T ss_dssp THHHHHHGGGCSCHHHHHHHHHHHGGG---CS-----HHHHHHHHHHHHHCCTHHHHHHHHHHHHHC--------SHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHhc---ch-----hhhHHHHHhhhccchhHHHHHHHHHHHHhC--------ccchH
Confidence 457788899999999998887765432 22 235788999999999999999999997653 24678
Q ss_pred HHHHhhccCCCCcchhhHHHHH
Q 004025 453 KYLSKLQVDEEPAIRTNTTILL 474 (778)
Q Consensus 453 ~~laklq~D~~~~IRtnt~icl 474 (778)
+.|.++..|+++.||-.++..|
T Consensus 87 ~~L~~ll~d~~~~vr~~A~~aL 108 (111)
T d1te4a_ 87 AAMEKLAETGTGFARKVAVNYL 108 (111)
T ss_dssp HHHHHHTTSCCTHHHHHHHHHG
T ss_pred HHHHHHHcCCCHHHHHHHHHHH
Confidence 8888899999999998877655
|
| >d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Karyopherin beta2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.62 E-value=0.008 Score=69.83 Aligned_cols=144 Identities=12% Similarity=0.140 Sum_probs=102.7
Q ss_pred hhhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhh--hhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCCh
Q 004025 367 EEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQV--VDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQ 444 (778)
Q Consensus 367 eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~--v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~ 444 (778)
++....++|.+...+.++++.+|-..+.-|-.+.+.+.... .-.+++|.++.++.|.++.||..++.++-.++..+..
T Consensus 390 ~~il~~~l~~l~~~l~s~~~~~reaa~~alg~i~eg~~~~~~~~l~~li~~l~~~l~d~~~~Vr~~a~~~l~~~~~~~~~ 469 (888)
T d1qbkb_ 390 DELLPHILPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVS 469 (888)
T ss_dssp SSSHHHHHHHHHHTTTSSSHHHHHHHHHHHHHHTTTSHHHHTTTHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTHHHHHS
T ss_pred HHHHHHHHHHHHHhhccchhHHHHHHHHHhhhhhhhHHHHhcccchhhhHHHHHhccCCCHHHHHHHHHHHHHHHHHhhh
Confidence 33445667778888899999999777766666665544332 2246889999999999999999999888766654322
Q ss_pred ---hhHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccc--hhhhHHHHHhhhhcCCCchhhhhee
Q 004025 445 ---RTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTR--KRVLINAFTVRALRDTFSPARGAAK 511 (778)
Q Consensus 445 ---~~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~--~~vL~~af~~~~lkD~f~~~R~A~l 511 (778)
......+++.|.+...|+.+.||.+++.+|+.+.+..+..-. -.-++..+. +.+.+.....+...+
T Consensus 470 ~~~~~~~~~~l~~ll~~l~d~~~~V~~~a~~al~~l~~~~~~~l~p~~~~il~~l~-~~l~~~~~~~~~~~~ 540 (888)
T d1qbkb_ 470 QPPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLV-FAFSKYQHKNLLILY 540 (888)
T ss_dssp SCHHHHTTTHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTTSSGGGHHHHHHHHH-HHTTTCCHHHHHHHH
T ss_pred hhhhhhhhhhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHH-HHHhhhhHHHHHHHH
Confidence 222345777777777899999999999999999988765432 233456666 677777766665543
|
| >d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HspBP1 domain domain: Hsp70-binding protein 1 (HspBP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.32 E-value=0.026 Score=55.51 Aligned_cols=111 Identities=14% Similarity=0.103 Sum_probs=88.8
Q ss_pred hhhhHHHHHHhhc-CChHHHHHHHHHhHHHHHhhcCh---hhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhcc---C
Q 004025 370 SVKVLPTIVKLFA-SNDRAIRVALLQHIDQYGQSFSA---QVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPK---L 442 (778)
Q Consensus 370 ~~~i~P~i~~lF~-~~Dr~iR~~LL~~l~~~~~~l~~---~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pk---L 442 (778)
...++|.+++++. ..+..+|...+.-+..++.+.+. ..+....++.++..+.+.+..+++.++..+..++-. .
T Consensus 99 ~~~~i~~Lv~lL~~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~~gi~~L~~lL~~~~~~~~~~a~~~L~~l~~~~~~~ 178 (264)
T d1xqra1 99 GLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEH 178 (264)
T ss_dssp HTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGG
T ss_pred HcCchHHHHHHhhcCCCHHHHHHHHHHHHHHhccchhhHHHHHHhhhhhHHHHHHhcCchHHHHHHHHHHHHHHhccHHH
Confidence 3467999999985 57788998888777777766553 345677899999999999999999999888877633 2
Q ss_pred ChhhHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhh
Q 004025 443 SQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASH 480 (778)
Q Consensus 443 ~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~ 480 (778)
-...++...++.|..+..++++.+|.+++.+|+.|+..
T Consensus 179 ~~~~~~~~~v~~L~~lL~~~~~~~~~~a~~aL~~L~~~ 216 (264)
T d1xqra1 179 KGTLCSMGMVQQLVALVRTEHSPFHEHVLGALCSLVTD 216 (264)
T ss_dssp HHHHHHTTHHHHHHHHHTSCCSTHHHHHHHHHHHHHTT
T ss_pred HHHHHHhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHhc
Confidence 22334556899999999999999999999999999854
|
| >d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: PBS lyase HEAT-like repeat domain: Hypothetical protein YibA species: Escherichia coli [TaxId: 562]
Probab=95.31 E-value=0.04 Score=53.28 Aligned_cols=128 Identities=15% Similarity=0.150 Sum_probs=78.6
Q ss_pred hhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHH-HhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHH
Q 004025 372 KVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHV-ATGFADTSAFLREMTLKSMLVLAPKLSQRTISGS 450 (778)
Q Consensus 372 ~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l-~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~ 450 (778)
..+|.+++++.++|..||...+.-|..+...-.. .+.+++.+ ...+.|.++.||...+.+|..+.+.-.. ....
T Consensus 50 ~~~~~l~~~l~d~~~~vr~~a~~aL~~l~~~~~~---~~~~~~~l~~~~l~d~~~~vr~~a~~aL~~~~~~~~~--~~~~ 124 (276)
T d1oyza_ 50 DAVRLAIEFCSDKNYIRRDIGAFILGQIKICKKC---EDNVFNILNNMALNDKSACVRATAIESTAQRCKKNPI--YSPK 124 (276)
T ss_dssp HHHHHHHHHHTCSSHHHHHHHHHHHHHSCCCTTT---HHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHCGG--GHHH
T ss_pred hHHHHHHHHHcCCCHHHHHHHHHHHHHhcccccc---ccchHHHHHHHHhcCCChhHHHHHHHHHHHHccccch--hhHH
Confidence 4678888888888888887776666554322221 22223322 2335678888888888888766654322 2245
Q ss_pred HHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhhheeee
Q 004025 451 LLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 451 LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~l~a 513 (778)
+++.+..+..|+.+.||...+.+++++... -.++.+. ..+.+.....|.++..+
T Consensus 125 ~~~~l~~~~~d~~~~vr~~a~~~l~~~~~~--------~~~~~l~-~l~~~~~~~~~~~~~~~ 178 (276)
T d1oyza_ 125 IVEQSQITAFDKSTNVRRATAFAISVINDK--------ATIPLLI-NLLKDPNGDVRNWAAFA 178 (276)
T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHTC-----------CCHHHHH-HHHTCSSHHHHHHHHHH
T ss_pred HHHHHHHHhcCcchHHHHHHHHHHhhcchH--------HHHHHHH-HhcccccchhhhhHHHH
Confidence 777777777788888888777777766532 2234455 66667777766655554
|
| >d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin beta species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.76 E-value=0.45 Score=52.90 Aligned_cols=163 Identities=12% Similarity=0.082 Sum_probs=102.6
Q ss_pred hhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhh-cChhhhhhcchHHHHhhcCCCc-HHHHHHHHHHHHhhhccCCh---
Q 004025 370 SVKVLPTIVKLFASNDRAIRVALLQHIDQYGQS-FSAQVVDEQVYPHVATGFADTS-AFLREMTLKSMLVLAPKLSQ--- 444 (778)
Q Consensus 370 ~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~-l~~~~v~~~I~P~l~~gf~Dt~-~~iRe~tlksi~~l~pkL~~--- 444 (778)
...|...++..+.++++.||-.+-+-+..++.+ ++.... ..++|.++..+.+.+ ..+|+.+++.+-.++..++.
T Consensus 93 ~~~ik~~ll~~l~~~~~~vr~~~a~~i~~i~~~~~p~~~w-peli~~L~~~~~s~~~~~~~~~al~~l~~i~e~~~~~~~ 171 (861)
T d2bpta1 93 KNQIKTNALTALVSIEPRIANAAAQLIAAIADIELPHGAW-PELMKIMVDNTGAEQPENVKRASLLALGYMCESADPQSQ 171 (861)
T ss_dssp HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHGGGTCC-HHHHHHHHHHTSTTSCHHHHHHHHHHHHHHHHTSSTTSS
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhCCcCch-HHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHhhHHHH
Confidence 345666777777888888887777666666654 222211 136777777776554 56788877777776655443
Q ss_pred ---hhHhHHHHHHHHhhcc-CCCCcchhhHHHHHHHhhhhcccccc----hhhhHHHHHhhhhcCCCchhhhheeee---
Q 004025 445 ---RTISGSLLKYLSKLQV-DEEPAIRTNTTILLGNIASHLNEGTR----KRVLINAFTVRALRDTFSPARGAAKIL--- 513 (778)
Q Consensus 445 ---~~l~~~LL~~laklq~-D~~~~IRtnt~icl~kIa~~L~~~~~----~~vL~~af~~~~lkD~f~~~R~A~l~a--- 513 (778)
..+.+-|...+..+.. +....||..++.|++.+..++..... ...++..+. ..++|+.+..|.+++..
T Consensus 172 ~~~~~~~~il~~i~~~~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~l~~ 250 (861)
T d2bpta1 172 ALVSSSNNILIAIVQGAQSTETSKAVRLAALNALADSLIFIKNNMEREGERNYLMQVVC-EATQAEDIEVQAAAFGCLCK 250 (861)
T ss_dssp TTGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHGGGCHHHHTSHHHHHHHHHHHH-HHHTCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHhHhHHhhhhhhHHHHhHH-HHhcCCCHHHHHHHHHHHHH
Confidence 1222223333333333 45578888888888888887764322 233455566 67888888888777655
Q ss_pred ---cc----------------------CCHHHHHHHHHHHHHHHHH
Q 004025 514 ---SY----------------------LNCDVRSKAFQAVDQFLQI 534 (778)
Q Consensus 514 ---~~----------------------~~~~VR~~a~~~~~~~l~~ 534 (778)
.| .+..||.+|.+.+..+...
T Consensus 251 i~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~v~~~~~~~l~~l~~~ 296 (861)
T d2bpta1 251 IMSKYYTFMKPYMEQALYALTIATMKSPNDKVASMTVEFWSTICEE 296 (861)
T ss_dssp HHHHHGGGCHHHHHHTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHH
Confidence 00 6778888888777665544
|
| >d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Plakophilin 1 helical region domain: Plakophilin 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.56 E-value=0.052 Score=55.36 Aligned_cols=109 Identities=16% Similarity=0.073 Sum_probs=83.3
Q ss_pred HHHHHHhhcCChHHHHHHHHHhHHHHHh---hcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChh---hH
Q 004025 374 LPTIVKLFASNDRAIRVALLQHIDQYGQ---SFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQR---TI 447 (778)
Q Consensus 374 ~P~i~~lF~~~Dr~iR~~LL~~l~~~~~---~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~---~l 447 (778)
+|+++++..+.|+.++...+..|-.+.. ..-...+.....|.++..+.+.++.+|+.++.++..++..=++. ..
T Consensus 4 ip~lv~~L~~~~~~~~~~a~~~l~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~aL~~L~~~~~~~~~~i~ 83 (457)
T d1xm9a1 4 IPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETR 83 (457)
T ss_dssp HHHHHHHHHSSCTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHHCCCCHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 7999999999999999999888888763 23444566667899999999999999999999999887433321 12
Q ss_pred hHHHHHHHHhhc-cCCCCcchhhHHHHHHHhhhhcc
Q 004025 448 SGSLLKYLSKLQ-VDEEPAIRTNTTILLGNIASHLN 482 (778)
Q Consensus 448 ~~~LL~~laklq-~D~~~~IRtnt~icl~kIa~~L~ 482 (778)
....++.|.++. .+..+.+|..++-||..++..-.
T Consensus 84 ~~g~v~~li~~l~~~~~~~~~~~a~~~l~~l~~~~~ 119 (457)
T d1xm9a1 84 RQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE 119 (457)
T ss_dssp HTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSSS
T ss_pred HCCChHHHHHHHhccCcHHHHHHHHHHHHHHHhhhh
Confidence 222355555544 46678899999999999998643
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=94.06 E-value=0.066 Score=54.41 Aligned_cols=39 Identities=5% Similarity=-0.130 Sum_probs=27.4
Q ss_pred EEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC
Q 004025 35 SHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR 77 (778)
Q Consensus 35 ~Vy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr 77 (778)
.||+++. .+|+.|++|+....... .+.+..|+..|..|.
T Consensus 37 ~vy~v~~-~dg~~~VlK~~rp~~~s---~~~i~~E~~~l~~L~ 75 (325)
T d1zyla1 37 RVYQFQD-EDRRRFVVKFYRPERWT---ADQILEEHQFALQLV 75 (325)
T ss_dssp EEEEECC-TTCCCEEEEEECTTTSC---HHHHHHHHHHHHHHH
T ss_pred eeEEEEc-CCCCEEEEEEeCCCCCC---HHHHHHHHHHHHHHH
Confidence 7999986 47899999998643222 345667777777664
|
| >d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Leucine-rich repeat variant domain: Leucine-rich repeat variant species: Azotobacter vinelandii [TaxId: 354]
Probab=93.51 E-value=0.0093 Score=58.35 Aligned_cols=106 Identities=20% Similarity=0.182 Sum_probs=65.5
Q ss_pred HHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHHHHH
Q 004025 375 PTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKY 454 (778)
Q Consensus 375 P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~LL~~ 454 (778)
+.+..+..++|..||....+++ +. +.+...+.|.++.||....+.+. .+.
T Consensus 117 ~~L~~Ll~D~d~~VR~~aa~~~-------~~--------~~L~~L~~D~d~~VR~~aA~~~~---------------~~~ 166 (233)
T d1lrva_ 117 EQLEQMAADRDYLVRAYVVQRI-------PP--------GRLFRFMRDEDRQVRKLVAKRLP---------------EES 166 (233)
T ss_dssp GGGGGGTTCSSHHHHHHHHHHS-------CG--------GGGGGTTTCSCHHHHHHHHHHSC---------------GGG
T ss_pred HHHHHHhcCCCHHHHHHHHhcc-------ch--------hHHHHHhcCCCHHHHHHHHHhcC---------------HHH
Confidence 3455566677777777766542 21 22344566777777776554321 134
Q ss_pred HHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhhheeee-------cc--CCHHHHHHHH
Q 004025 455 LSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL-------SY--LNCDVRSKAF 525 (778)
Q Consensus 455 laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~l~a-------~~--~~~~VR~~a~ 525 (778)
|.++..|+++.||.+++-- |+. +... ++++|+.+.+|.++... .. +++.||..|.
T Consensus 167 L~~l~~D~d~~VR~~aa~~-------L~~--------~~L~-~l~~D~d~~VR~aaae~~~~~ll~~L~D~d~~VR~aA~ 230 (233)
T d1lrva_ 167 LGLMTQDPEPEVRRIVASR-------LRG--------DDLL-ELLHDPDWTVRLAAVEHASLEALRELDEPDPEVRLAIA 230 (233)
T ss_dssp GGGSTTCSSHHHHHHHHHH-------CCG--------GGGG-GGGGCSSHHHHHHHHHHSCHHHHHHCCCCCHHHHHHHH
T ss_pred HHHHccCCCHHHHHHHHHh-------cCc--------HHHH-HHHhCCCHHHHHHHHHhccHHHHHHhCCCCHHHHHHHH
Confidence 5667778888888776532 221 3455 77888888888887654 11 7788887775
Q ss_pred H
Q 004025 526 Q 526 (778)
Q Consensus 526 ~ 526 (778)
+
T Consensus 231 ~ 231 (233)
T d1lrva_ 231 G 231 (233)
T ss_dssp C
T ss_pred H
Confidence 3
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=93.44 E-value=0.041 Score=57.68 Aligned_cols=72 Identities=6% Similarity=-0.141 Sum_probs=41.2
Q ss_pred CceeccCCCCCCCceEEEEeEECC-------CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeeEeeeeEec
Q 004025 20 PYNIGDPYPSAWGSWSHFQGTSKD-------DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVE 91 (778)
Q Consensus 20 ~Y~i~~~lg~g~g~w~Vy~g~~k~-------~g~~VaIK~~~~~~~~~~~~~~~~~ev~~Lk~Lr-HPnIlk~~d~~e~e 91 (778)
..+|. +++.|-. -.+|+..... .++.|.++++-.. .. .-...+|.++++.+. +.-..+++.+++.
T Consensus 44 ~l~v~-~l~GGlt-N~~y~v~~~~~~~~~~~~~~~vllRi~g~~-~~---~idr~~E~~i~~~ls~~gl~Pkll~~~~~- 116 (395)
T d1nw1a_ 44 HLRIS-RIKGGMS-NMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ET---ESHLVAESVIFTLLSERHLGPKLYGIFSG- 116 (395)
T ss_dssp GEEEE-EECCCTT-EEEEEEEECTTSCCSSSCCSEEEEEEECSC-CC---HHHHHHHHHHHHHHHHTTSSSCEEEEETT-
T ss_pred ceEEE-EcCCccc-cceEEEEeCCCCccccCCCCcEEEEecCCc-ch---hhHHHHHHHHHHHHHhCCCCCeEEEEcCC-
Confidence 34443 3444431 2788887643 2355777776532 11 123557888888875 4334567776642
Q ss_pred ccccCCcccEEEEEecCC
Q 004025 92 NIDATSTKITIYIVTEPV 109 (778)
Q Consensus 92 ~~~g~~~~~~lyIVtE~v 109 (778)
.+|+||+
T Consensus 117 -----------g~I~efi 123 (395)
T d1nw1a_ 117 -----------GRLEEYI 123 (395)
T ss_dssp -----------EEEECCC
T ss_pred -----------ceEEEEe
Confidence 5688888
|
| >d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: beta-Catenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.39 E-value=0.34 Score=51.51 Aligned_cols=183 Identities=13% Similarity=0.021 Sum_probs=119.8
Q ss_pred hhhhhchHHHHHHHHhhCCCCc--hhhHHHHHhccC--CChhhh-hhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhc-
Q 004025 330 QIVLKKLLPLLASALEFGSAAA--PALTALLKMGSW--LSTEEF-SVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSF- 403 (778)
Q Consensus 330 ~~~~~kILP~Ll~~~~~~~~~~--~~L~~llki~~~--l~~eef-~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l- 403 (778)
.+.....+|.|+..+..+.... .++..+..++.. -....+ ....+|.++.++...+..++...+.-+..+...-
T Consensus 96 ~i~~~g~i~~Li~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~ 175 (529)
T d1jdha_ 96 AIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQ 175 (529)
T ss_dssp HHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHCCCHHHHHHHhCCCCHHHHHHHHHHHHHhhcccchhhhHHHhcCCchHHHHHHHccChHHHHHHHHHHHHHhhhhh
Confidence 3455567899988876543211 122222233322 122333 4457899999999999988877777676665331
Q ss_pred --ChhhhhhcchHHHHhhcC-CCcHHHHHHHHHHHHhhhc--cCChhhHhHHHHHHHHhhccCCCCcchhhHHHHHHHhh
Q 004025 404 --SAQVVDEQVYPHVATGFA-DTSAFLREMTLKSMLVLAP--KLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIA 478 (778)
Q Consensus 404 --~~~~v~~~I~P~l~~gf~-Dt~~~iRe~tlksi~~l~p--kL~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa 478 (778)
....+....++.++..+. .....+++.+...+-.+.- ......+....++.|.++..++...++.+++-||..++
T Consensus 176 ~~~~~~~~~~~~~~L~~ll~~~~~~~~~~~~~~~l~~ls~~~~~~~~~~~~g~~~~L~~ll~~~~~~~~~~a~~~l~~ls 255 (529)
T d1jdha_ 176 ESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLS 255 (529)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSTTHHHHHHHTTHHHHHHTTTTSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccchHHHHHHHhhhhHHHHHHHHHHHhhhhccccccchhhhhhhhhhHHHHhcccchhhhhhhhhHHHhcc
Confidence 122344455777777764 3456788888777766652 22223345567888888888888899999999999998
Q ss_pred hhcccccchhhhHHHHHhhhhcCCCchhhhheeee
Q 004025 479 SHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 479 ~~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~l~a 513 (778)
..-.......-.++.+. +.+++.....|..++.+
T Consensus 256 ~~~~~~~~~~~~i~~Lv-~ll~~~~~~~~~~a~~~ 289 (529)
T d1jdha_ 256 DAATKQEGMEGLLGTLV-QLLGSDDINVVTCAAGI 289 (529)
T ss_dssp TTCTTCSCCHHHHHHHH-HHTTCSCHHHHHHHHHH
T ss_pred ccccchhhhhhcchhhh-hhcccccHHHHHHHHHH
Confidence 76654444455678888 88988888888777665
|
| >d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: beta-Catenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.38 E-value=0.17 Score=54.17 Aligned_cols=144 Identities=12% Similarity=0.118 Sum_probs=71.7
Q ss_pred hhhhhhHHHHHHhhcCChHHHHHHHHHhHHHHHhhcChh--hhh-hcchHHHHhhcCC-CcHHHHHHHHHHHHhhhccCC
Q 004025 368 EFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQ--VVD-EQVYPHVATGFAD-TSAFLREMTLKSMLVLAPKLS 443 (778)
Q Consensus 368 ef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~--~v~-~~I~P~l~~gf~D-t~~~iRe~tlksi~~l~pkL~ 443 (778)
++..+.+|.++++..+.|..+|...+.-+..+..+-... .+. ..+.|.++..+.+ .++.+|+.++.++..+...=.
T Consensus 13 ~~~~~aip~L~~lL~~~~~~v~~~A~~~l~~l~~~~~~~~~~~~~~~~v~~l~~~L~~~~~~~~~~~a~~~L~~l~~~~~ 92 (529)
T d1jdha_ 13 ELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHRE 92 (529)
T ss_dssp ----CHHHHHHHHHTCSCHHHHHHHHHHHHHHHTSHHHHHHHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccHHHHHHHHhhhHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCch
Confidence 455555666666666666666655555555544321111 111 2355666666544 345666666666655542111
Q ss_pred --hhhHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchhh----hHHHHHhhhhcCCCchhhhheeee
Q 004025 444 --QRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRV----LINAFTVRALRDTFSPARGAAKIL 513 (778)
Q Consensus 444 --~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~v----L~~af~~~~lkD~f~~~R~A~l~a 513 (778)
...+....+|.|.++..++++.++.+++-+|+.|+..-.. .|+.+ .++.+. ..|+++....|..+..+
T Consensus 93 ~~~~i~~~g~i~~Li~lL~~~~~~v~~~a~~aL~~l~~~~~~-~~~~~~~~g~i~~Lv-~lL~~~~~~~~~~a~~~ 166 (529)
T d1jdha_ 93 GLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEG-AKMAVRLAGGLQKMV-ALLNKTNVKFLAITTDC 166 (529)
T ss_dssp HHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTT-HHHHHHHHTHHHHHH-HGGGCCCHHHHHHHHHH
T ss_pred hHHHHHHCCCHHHHHHHhCCCCHHHHHHHHHHHHHhhcccch-hhhHHHhcCCchHHH-HHHHccChHHHHHHHHH
Confidence 1122334455566655566666666666666666643221 22222 245555 56666666666555544
|
| >d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Plakophilin 1 helical region domain: Plakophilin 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.37 E-value=0.45 Score=47.90 Aligned_cols=100 Identities=10% Similarity=0.007 Sum_probs=69.8
Q ss_pred chHHHHhhcCCCcHHHHHHHHHHHHhhhcc---CChhhHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhhcccccchh
Q 004025 412 VYPHVATGFADTSAFLREMTLKSMLVLAPK---LSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKR 488 (778)
Q Consensus 412 I~P~l~~gf~Dt~~~iRe~tlksi~~l~pk---L~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~ 488 (778)
-+|.++..+.+.++.+|..++..|-.++-. .-........+|.|.++..++.+.||.+++-||++|+..- ...|..
T Consensus 3 ~ip~lv~~L~~~~~~~~~~a~~~l~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~aL~~L~~~~-~~~~~~ 81 (457)
T d1xm9a1 3 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRS-TTNKLE 81 (457)
T ss_dssp CHHHHHHHHHSSCTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSC-HHHHHH
T ss_pred CHHHHHHHhCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHHCCCCHHHHHHHHHHHHHHHcCC-HHHHHH
Confidence 369999999999999999999999998732 2223344455788889988999999999999999998432 223333
Q ss_pred hh----HHHHHhhhhc-CCCchhhhheeee
Q 004025 489 VL----INAFTVRALR-DTFSPARGAAKIL 513 (778)
Q Consensus 489 vL----~~af~~~~lk-D~f~~~R~A~l~a 513 (778)
+. ++.+. +.++ +.....|..++.+
T Consensus 82 i~~~g~v~~li-~~l~~~~~~~~~~~a~~~ 110 (457)
T d1xm9a1 82 TRRQNGIREAV-SLLRRTGNAEIQKQLTGL 110 (457)
T ss_dssp HHHTTCHHHHH-HHHTTCCCHHHHHHHHHH
T ss_pred HHHCCChHHHH-HHHhccCcHHHHHHHHHH
Confidence 32 55566 5554 3334445544444
|
| >d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Leucine-rich repeat variant domain: Leucine-rich repeat variant species: Azotobacter vinelandii [TaxId: 354]
Probab=84.52 E-value=0.16 Score=49.06 Aligned_cols=91 Identities=15% Similarity=0.158 Sum_probs=67.9
Q ss_pred HHHHHhhcCChHHHHHHHHHhHHHHHhhcChhhhhhcchHHHHhhcCCCcHHHHHHHHHHHHhhhccCChhhHhHHHHHH
Q 004025 375 PTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKY 454 (778)
Q Consensus 375 P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~P~l~~gf~Dt~~~iRe~tlksi~~l~pkL~~~~l~~~LL~~ 454 (778)
+.+..+..++|+.||..+..++ + .+.+.....|.++.||...+..+. . +.
T Consensus 141 ~~L~~L~~D~d~~VR~~aA~~~-------~--------~~~L~~l~~D~d~~VR~~aa~~L~-------~--------~~ 190 (233)
T d1lrva_ 141 GRLFRFMRDEDRQVRKLVAKRL-------P--------EESLGLMTQDPEPEVRRIVASRLR-------G--------DD 190 (233)
T ss_dssp GGGGGTTTCSCHHHHHHHHHHS-------C--------GGGGGGSTTCSSHHHHHHHHHHCC-------G--------GG
T ss_pred hHHHHHhcCCCHHHHHHHHHhc-------C--------HHHHHHHccCCCHHHHHHHHHhcC-------c--------HH
Confidence 4567788899999998877643 2 245677789999999999887652 1 34
Q ss_pred HHhhccCCCCcchhhHHHHHHHhhhhcccccchhhhHHHHHhhhhcCCCchhhhheee
Q 004025 455 LSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKI 512 (778)
Q Consensus 455 laklq~D~~~~IRtnt~icl~kIa~~L~~~~~~~vL~~af~~~~lkD~f~~~R~A~l~ 512 (778)
|.++..|++..||...+ +++. +... +.|+|+.+.+|.+++.
T Consensus 191 L~~l~~D~d~~VR~aaa-------e~~~---------~~ll-~~L~D~d~~VR~aA~~ 231 (233)
T d1lrva_ 191 LLELLHDPDWTVRLAAV-------EHAS---------LEAL-RELDEPDPEVRLAIAG 231 (233)
T ss_dssp GGGGGGCSSHHHHHHHH-------HHSC---------HHHH-HHCCCCCHHHHHHHHC
T ss_pred HHHHHhCCCHHHHHHHH-------Hhcc---------HHHH-HHhCCCCHHHHHHHHH
Confidence 67778899999998765 2322 3344 7899999999998864
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=83.17 E-value=0.14 Score=51.17 Aligned_cols=29 Identities=14% Similarity=0.095 Sum_probs=26.0
Q ss_pred CccccccCCCCeEEcCCCcEEEEeccccc
Q 004025 149 KLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (778)
Q Consensus 149 ~ivH~dLkp~NI~v~~~g~~KL~dFgla~ 177 (778)
++||||+.++||+++.++..-+.||+.++
T Consensus 184 giIHgDl~~dNvl~~~~~v~gvIDF~~~~ 212 (316)
T d2ppqa1 184 GVIHADLFQDNVFFLGDELSGLIDFYFAC 212 (316)
T ss_dssp EEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred ccccCCcchhhhhcccccceeEecccccc
Confidence 69999999999999988767899999875
|