Citrus Sinensis ID: 004032

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------78

MAPSLSKNVLDAIGLLDSQIPPSISLEGSNFLANGHPIFTQVPINIIATPSPFTSANKTKHTAGCFVGFDADESSDRHVVPIGKLNGIRFMSIFRFKAWWTTHWVGNSGKDMEHETHLMILDKNDLGRPYVLLLPILEGPFRASLQPGTDNYVDMCVESGSSQIRCSSFRSCLYMRVGDDPYSLVKEAMKVVRVHLGTFKLLEEKTVPGIVDKFGWCTWDAFYLQVHPKGVYEGVKGLVEGGCPPGLVLIDDGWQSICHDDEPIIDQEGMNRTSAGEQMPCRLIDFEENYKFRDYKSPRVPSNKGMGAFVRDLKDEFKSVEHVYVWHALCGYWGGIRPNVAGMPESRLIAPKLSQGLQTTMEDLAVEKIVDNGVGLVPPELVQNLYEGLHSHLESVGIDGVKVDVIHLLEMVAEDFGGRVELAKAYYKALTASVRKHFKGNGVIASMEHCNDFMYLGTETISLGRVGDDFWCSDPKGVKNGTFWLQGCHMVHCAYNSLWMGNVIQPDWDMFQSTHPCAEFHAASRAISGGPIYISDSVGNHNFDLLKALVMPDGSILRCQFYALPTRDCLFENPLHDGKTVLKIWNLNKHTGVLGLFNCQGGGWCSVTRKNVGFSMFSNTLTCLASPNDIEWNNGKDPISVKGVDVFAVYKFQENKLKLLKFSDDLEVTVEPFNFELLTVSPVTVLPKGSIQFAPIGLVNMLNTGGAVQSLAFDDDENLVRIEVKGCGEMKVFASEKPLMCKVDGASAEFSYEDQMATVQVPWPNNSSKLTVVEFLFE

cccccccccccccccccccccccEEEEccEEEEccEEccccccccEEEccccccccccccccccEEEEEEcccccccEEEEccccccccEEEEEEEccccccccccccccccccccEEEEEEEccccccEEEEEEEEcccEEEEEcccccccEEEEEEccccccccccccEEEEEEEcccHHHHHHHHHHHHHHHHccccccccccccccccccccccHHccccccccHHHHHHHHHHHHccccccEEEEEcccEEEccccccccccccccccccccccccccccHHHcccccccccccccccccHHHHHHHHHHHcccccEEEEEEHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccEEEEcccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccEEEcccccccccccccccEEEEEEcccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHccccEEEEcccccccHHHHHHHHccccccEEEEEcccccccccccccccccccEEEEEEcccccEEEEEEEcccccccccEEcccccccccccEEEcccccccccccccccccccccEEEEEEEEcccEEEEEcccccEEEEEccccEEEEEEEEEEEEccccEEEEEEccEEcccccccEEEEEEEccccEEEEEEEEEEEEEEEEcccccEEEEccEEEEEEEEccEEEEEEEccccccccEEEEEEEc

cccccccccccccccccccccccEEEcccEEEEccEEEEccccccEEEEcccccccccccccccEEEEEcccccccccEEEcccccccEEEEEEEEEcHHHccccccccccccHcEEEEEEEccccccEEEEEEEEccccEEEEEEcccccEEEEEEEccccccccccccEEEEEEccccHHHHHHHHHHHHHHHHccccHHHHccccHHHHccccccHHHHHccccHHHHHHHHHHHHHcccccEEEEEEccccEccccccccccccccHHcccccHHHHHHHccHHHHccccccccccccccHHHHHHHHHHHHcccccEEEEEEHHHcccccccccccccccccEEEcccccccccccccccHHHHHccccccccHHHHHHHHHHHHHHHHHccccEEEEcHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccEEEEccccccHHEccccccEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHccccEEEEcccccccHHHHHHHccccccEEccccccccccHHccccccccccEEEEEEEcccccEEEEEEEcccccccHHHccccccccccccEEEEEcHHHccccccccccccccccEEEEEEEcccEEEEEcccccEEEEEccccEEEEEEEEEEEcccccEEEEEEEEHHccccccEEEEEEEccccEEEEEEEEEcEEEEEEEcccccEEEEccEEEEEEEcccEEEEEEccccccccEEEEEEEEc

MAPSLSKNVLDAIglldsqippsislegsnflanghpiftqvpiniiatpspftsanktkhtagcfvgfdadessdrhvvpigklngiRFMSIFRFKAWWTthwvgnsgkdmeheTHLMildkndlgrpyvlllpilegpfraslqpgtdnyVDMCVesgssqircssfrsclymrvgddpySLVKEAMKVVRVHLGTFklleektvpgivdkfgwctwdafylqvhpkgvyegvkglveggcppglvliddgwqsichddepiidqegmnrtsageqmpcrlidfeenykfrdyksprvpsnkgmgAFVRDLKDEFKSVEHVYVWHALCgywggirpnvagmpesrliaPKLSQGLQTTMEDLAVEKIVdngvglvppeLVQNLYEGLHSHLesvgidgvKVDVIHLLEMVAEDFGGRVELAKAYYKALTASVRKHFKGNGVIASMEHCNDFMYLGTEtislgrvgddfwcsdpkgvkngtfwlQGCHMVHCaynslwmgnviqpdwdmfqsthpcaefhaasraisggpiyisdsvgnhNFDLLKalvmpdgsilrcqfyalptrdclfenplhdgktVLKIWNLNKhtgvlglfncqgggwcsvtrknvgfsmfsntltclaspndiewnngkdpisvkgVDVFAVYKFQENKLkllkfsddlevtvepfnfelltvspvtvlpkgsiqfapiglvnmlntggavqslafdddenlVRIEVKGCgemkvfasekplmckvdgasaefsyedqmatvqvpwpnnsskltVVEFLFE

MAPSLSKNVLDAIGLLDSQIPPSISLEGSNFLANGHPIFTQVPINIIATPSPFTSANKTKHTAGCFVGfdadessdrhvVPIGKLNGIRFMSIFRFKAWWTTHWVGNSGKDMEHETHLMILDKNDLGRPYVLLLPILEGPFRASLQPGTDNYVDMCVESGSSQIRCSSFRSCLYMRVGDDPYSLVKEAMKVVRVHLGtfklleektvpGIVDKFGWCTWDAFYLQVHPKGVYEGVKGLVEGGCPPGLVLIDDGWQSICHDDEPIIDQEGMNRTSAGEQMPCRLIDFEENYKfrdyksprvpsnkgMGAFVRDLKDEFKSVEHVYVWHALCGYWGGIRPNVAGMPESRLIAPKLSQGLQTTMEDLAVEKIVDNGVGLVPPELVQNLYEGLHSHLESVGIDGVKVDVIHLLEMVAEDFGGRVELAKAYYKALTASVRKHFKGNGVIASMEHCNDFMYLGTETISLGRVGDDFWCSDPKGVKNGTFWLQGCHMVHCAYNSLWMGNVIQPDWDMFQSTHPCAEFHAASRAISGGPIYISDSVGNHNFDLLKALVMPDGSILRCQFYALPTRDCLFENPLHDGKTVLKIWNLNKHTGVLGLFNCQGGGWCSVTRKNVGFSMFSNTLTCLASPNDIEWNNGKDPISVKGVDVFAVYKFQENKLKLLKFSDDLEVTVEPFNFELLTVSPVTVLPKGSIQFAPIGLVNMLNTGGAVQSLAFDDDENLVRIEVKGCGEMKVFASEKPLMCKVDGASAEFSYEDQMAtvqvpwpnnssKLTVVEFLFE

*********LDAIGLLDSQIPPSISLEGSNFLANGHPIFTQVPINIIATPSPFTSANKTKHTAGCFVGFDADESSDRHVVPIGKLNGIRFMSIFRFKAWWTTHWVGNSGKDMEHETHLMILDKNDLGRPYVLLLPILEGPFRASLQPGTDNYVDMCVESGSSQIRCSSFRSCLYMRVGDDPYSLVKEAMKVVRVHLGTFKLLEEKTVPGIVDKFGWCTWDAFYLQVHPKGVYEGVKGLVEGGCPPGLVLIDDGWQSICHDDEPIID************MPCRLIDFEENYKFRDYK********GMGAFVRDLKDEFKSVEHVYVWHALCGYWGGIRPNVAGMPESRLIAPKLSQGLQTTMEDLAVEKIVDNGVGLVPPELVQNLYEGLHSHLESVGIDGVKVDVIHLLEMVAEDFGGRVELAKAYYKALTASVRKHFKGNGVIASMEHCNDFMYLGTETISLGRVGDDFWCSDPKGVKNGTFWLQGCHMVHCAYNSLWMGNVIQPDWDMFQSTHPCAEFHAASRAISGGPIYISDSVGNHNFDLLKALVMPDGSILRCQFYALPTRDCLFENPLHDGKTVLKIWNLNKHTGVLGLFNCQGGGWCSVTRKNVGFSMFSNTLTCLASPNDIEWNNGKDPISVKGVDVFAVYKFQENKLKLLKFSDDLEVTVEPFNFELLTVSPVTVLPKGSIQFAPIGLVNMLNTGGAVQSLAFDDDENLVRIEVKGCGEMKVFASEKPLMCKVDGASAEFSYEDQMATVQVPWPNNSSKLTVVEFL**

**********************SISLEGSNFLANGHPIFTQVPINIIATPSPF***********CFVGF*******RHVVPIGKLNGIRFMSIFRFKAWWTTHWVGNSGKDMEHETHLMILDKNDLGRPYVLLLPILEGPFRASLQPGTDNYVDMCVESGSSQIRCSSFRSCLYMRVGDDPYSLVKEAMKVVR****************IVDKFGWCTWDAFYLQVHPKGVYEGVKGLVEGGCPPGLVLIDDGWQSICHDDEPIIDQEGMNRTSAGEQMPCRLIDFEEN**************KGMGAFVRDLKDEFKSVEHVYVWHALCGYWGGIRPNVAGMPESRLIAPKLSQGLQTTMEDLAVEKIVDNGVGLVPPELVQNLYEGLHSHLESVGIDGVKVDVIHLLEMVAEDFGGRVELAKAYYKALTASVRKHFKGNGVIASMEHCNDFMYLGTETISLGRVGDDFWCSDPKGVKNGTFWLQGCHMVHCAYNSLWMGNVIQPDWDMFQSTHPCAEFHAASRAISGGPIYISDSVGNHNFDLLKALVMPDGSILRCQFYALPTRDCLFENPLHDGKTVLKIWNLNKHTGVLGLFNCQGGGWCSVTRKNVGFSMFSNTLTCLASPNDIEWNNGKDPISVKGVDVFAVYKFQENKLKLLKFSDDLEVTVEPFNFELLTVSPVTVLPKGSIQFAPIGLVNMLNTGGAVQSLAFDDDENLVRIEVKGCGEMKVFASEKPLMCKVDGASAEFSYEDQMATVQVPWPNNSSKLTVVEFLFE

****************DSQIPPSISLEGSNFLANGHPIFTQVPINIIATPSPFTSANKTKHTAGCFVGFDADESSDRHVVPIGKLNGIRFMSIFRFKAWWTTHWVGNSGKDMEHETHLMILDKNDLGRPYVLLLPILEGPFRASLQPGTDNYVDMCVESGSSQIRCSSFRSCLYMRVGDDPYSLVKEAMKVVRVHLGTFKLLEEKTVPGIVDKFGWCTWDAFYLQVHPKGVYEGVKGLVEGGCPPGLVLIDDGWQSICHDDEPIIDQEGMNRTSAGEQMPCRLIDFEENYKFRDYKSPRVPSNKGMGAFVRDLKDEFKSVEHVYVWHALCGYWGGIRPNVAGMPESRLIAPKLSQGLQTTMEDLAVEKIVDNGVGLVPPELVQNLYEGLHSHLESVGIDGVKVDVIHLLEMVAEDFGGRVELAKAYYKALTASVRKHFKGNGVIASMEHCNDFMYLGTETISLGRVGDDFWCSDPKGVKNGTFWLQGCHMVHCAYNSLWMGNVIQPDWDMFQSTHPCAEFHAASRAISGGPIYISDSVGNHNFDLLKALVMPDGSILRCQFYALPTRDCLFENPLHDGKTVLKIWNLNKHTGVLGLFNCQGGGWCSVTRKNVGFSMFSNTLTCLASPNDIEWNNGKDPISVKGVDVFAVYKFQENKLKLLKFSDDLEVTVEPFNFELLTVSPVTVLPKGSIQFAPIGLVNMLNTGGAVQSLAFDDDENLVRIEVKGCGEMKVFASEKPLMCKVDGASAEFSYEDQMATVQVPWPNNSSKLTVVEFLFE

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		778	2.2.26 [Sep-21-2011]
Q8VWN6		798	Galactinol--sucrose galac	N/A	no	0.994	0.969	0.684	0.0
Q9FND9		783	Probable galactinol--sucr	yes	no	0.961	0.955	0.646	0.0
Q5VQG4		783	Galactinol--sucrose galac	yes	no	0.983	0.977	0.627	0.0
Q94A08		773	Probable galactinol--sucr	no	no	0.916	0.922	0.395	1e-161
Q8RX87		749	Probable galactinol--sucr	no	no	0.933	0.969	0.397	1e-160
Q84VX0		754	Probable galactinol--sucr	no	no	0.916	0.945	0.396	1e-148
Q93XK2		853	Stachyose synthase OS=Pis	N/A	no	0.620	0.566	0.494	1e-138
Q9SYJ4		876	Probable galactinol--sucr	no	no	0.610	0.542	0.476	1e-133
Q97U94		648	Alpha-galactosidase OS=Su	yes	no	0.476	0.572	0.277	1e-31

>sp\|Q8VWN6\|RFS_PEA Galactinol--sucrose galactosyltransferase OS=Pisum sativum GN=RFS PE=1 SV=1	Back alignment and function desciption

 Score = 1147 bits (2966), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 545/796 (68%), Positives = 643/796 (80%), Gaps = 22/796 (2%)

Query: 3   PSLSKNVL--DAIGLLDSQIPP--SISLEGS-NFLANGHPIFTQVPINII---------- 47
           PS++K     D I  +D    P  SISL+ S NFL NGHP  TQVP NI           
Sbjct: 4   PSITKTATQQDVISTVDIGNSPLLSISLDQSRNFLVNGHPFLTQVPPNITTTTTSTPSPF 63

Query: 48  ----ATPSPFTSANKTKHTAGCFVGFDADESSDRHVVPIGKLNGIRFMSIFRFKAWWTTH 103
               +      + N T    GCFVGF+  E+   HVVP+GKL GI+F SIFRFK WWTTH
Sbjct: 64  LDFKSNKDTIANNNNTLQQQGCFVGFNTTEAKSHHVVPLGKLKGIKFTSIFRFKVWWTTH 123

Query: 104 WVGNSGKDMEHETHLMILDKN-DLGRPYVLLLPILEGPFRASLQPGTDNYVDMCVESGSS 162
           WVG +G +++HET ++ILDKN  LGRPYVLLLPILE  FR SLQPG ++YVDM VESGS+
Sbjct: 124 WVGTNGHELQHETQILILDKNISLGRPYVLLLPILENSFRTSLQPGLNDYVDMSVESGST 183

Query: 163 QIRCSSFRSCLYMRVGDDPYSLVKEAMKVVRVHLGTFKLLEEKTVPGIVDKFGWCTWDAF 222
            +  S+F++CLY+ + +DPY LVKEA+KV++  LGTFK LEEKT P I++KFGWCTWDAF
Sbjct: 184 HVTGSTFKACLYLHLSNDPYRLVKEAVKVIQTKLGTFKTLEEKTPPSIIEKFGWCTWDAF 243

Query: 223 YLQVHPKGVYEGVKGLVEGGCPPGLVLIDDGWQSICHDDE-PIIDQEGMNRTSAGEQMPC 281
           YL+VHPKGV+EGVK L +GGCPPG V+IDDGWQSI HDD+ P+ +++GMNRTSAGEQMPC
Sbjct: 244 YLKVHPKGVWEGVKALTDGGCPPGFVIIDDGWQSISHDDDDPVTERDGMNRTSAGEQMPC 303

Query: 282 RLIDFEENYKFRDYKSPRVPSNKGMGAFVRDLKDEFKSVEHVYVWHALCGYWGGIRPNVA 341
           RLI +EENYKFR+Y++      KG+  FVRDLK+EF+SVE VYVWHALCGYWGG+RP V 
Sbjct: 304 RLIKYEENYKFREYENGDNGGKKGLVGFVRDLKEEFRSVESVYVWHALCGYWGGVRPKVC 363

Query: 342 GMPESRLIAPKLSQGLQTTMEDLAVEKIVDNGVGLVPPELVQNLYEGLHSHLESVGIDGV 401
           GMPE++++ PKLS G++ TMEDLAV+KIV+NGVGLVPP L Q +++G+HSHLES GIDGV
Sbjct: 364 GMPEAKVVVPKLSPGVKMTMEDLAVDKIVENGVGLVPPNLAQEMFDGIHSHLESAGIDGV 423

Query: 402 KVDVIHLLEMVAEDFGGRVELAKAYYKALTASVRKHFKGNGVIASMEHCNDFMYLGTETI 461
           KVDVIHLLE+++E++GGRVELAKAYYKALT+SV KHFKGNGVIASMEHCNDF  LGTE I
Sbjct: 424 KVDVIHLLELLSEEYGGRVELAKAYYKALTSSVNKHFKGNGVIASMEHCNDFFLLGTEAI 483

Query: 462 SLGRVGDDFWCSDPKGVKNGTFWLQGCHMVHCAYNSLWMGNVIQPDWDMFQSTHPCAEFH 521
           SLGRVGDDFWC DP G  NGT+WLQGCHMVHCAYNSLWMGN I PDWDMFQSTHPCAEFH
Sbjct: 484 SLGRVGDDFWCCDPSGDPNGTYWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFH 543

Query: 522 AASRAISGGPIYISDSVGNHNFDLLKALVMPDGSILRCQFYALPTRDCLFENPLHDGKTV 581
           AASRAISGGP+Y+SD VGNHNF LLK+ V+PDGSILRCQ YALPTRDCLFE+PLH+GKT+
Sbjct: 544 AASRAISGGPVYVSDCVGNHNFKLLKSFVLPDGSILRCQHYALPTRDCLFEDPLHNGKTM 603

Query: 582 LKIWNLNKHTGVLGLFNCQGGGWCSVTRKNVGFSMFSNTLTCLASPNDIEWNNGKDPISV 641
           LKIWNLNK+ GVLGLFNCQGGGWC  TR+N   S FS+ +TC ASP DIEW NGK P+ +
Sbjct: 604 LKIWNLNKYAGVLGLFNCQGGGWCPETRRNKSASEFSHAVTCYASPEDIEWCNGKTPMDI 663

Query: 642 KGVDVFAVYKFQENKLKLLKFSDDLEVTVEPFNFELLTVSPVTVLPKGSIQFAPIGLVNM 701
           KGVDVFAVY F+E KL L+K SD LEV++EPF+FEL+TVSP+ V  K  IQFAPIGLVNM
Sbjct: 664 KGVDVFAVYFFKEKKLSLMKCSDRLEVSLEPFSFELMTVSPLKVFSKRLIQFAPIGLVNM 723

Query: 702 LNTGGAVQSLAFDDDENLVRIEVKGCGEMKVFASEKPLMCKVDGASAEFSYEDQMATVQV 761
           LN+GGAVQSL FDD  +LV+I V+GCGE+ VFASEKP+ CK+DG S EF YED+M  VQ+
Sbjct: 724 LNSGGAVQSLEFDDSASLVKIGVRGCGELSVFASEKPVCCKIDGVSVEFDYEDKMVRVQI 783

Query: 762 PWPNNSSKLTVVEFLF 777
            WP  SS L++VEFLF
Sbjct: 784 LWP-GSSTLSLVEFLF 798

Transglycosidase operating by a ping-pong reaction mechanism. Involved in the synthesis of raffinose, a major soluble carbohydrate in seeds, roots and tubers. Able to utilize D-ononitol and D-pinitol as acceptors. May also act as a glycoside hydrolase.
Pisum sativum (taxid: 3888)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 8EC: 2

>sp\|Q9FND9\|RFS5_ARATH Probable galactinol--sucrose galactosyltransferase 5 OS=Arabidopsis thaliana GN=RFS5 PE=1 SV=1	Back alignment and function description

>sp\|Q5VQG4\|RFS_ORYSJ Galactinol--sucrose galactosyltransferase OS=Oryza sativa subsp. japonica GN=RFS PE=1 SV=1	Back alignment and function description

>sp\|Q94A08\|RFS2_ARATH Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana GN=RFS2 PE=2 SV=2	Back alignment and function description

>sp\|Q8RX87\|RFS6_ARATH Probable galactinol--sucrose galactosyltransferase 6 OS=Arabidopsis thaliana GN=RFS6 PE=2 SV=2	Back alignment and function description

>sp\|Q84VX0\|RFS1_ARATH Probable galactinol--sucrose galactosyltransferase 1 OS=Arabidopsis thaliana GN=RFS1 PE=2 SV=1	Back alignment and function description

>sp\|Q93XK2\|STSYN_PEA Stachyose synthase OS=Pisum sativum GN=STS1 PE=1 SV=1	Back alignment and function description

>sp\|Q9SYJ4\|RFS4_ARATH Probable galactinol--sucrose galactosyltransferase 4 OS=Arabidopsis thaliana GN=RFS4 PE=2 SV=3	Back alignment and function description

>sp\|Q97U94\|AGAL_SULSO Alpha-galactosidase OS=Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=galS PE=1 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		778
224133642		765	predicted protein [Populus trichocarpa]	0.982	0.998	0.787	0.0
225456938		780	PREDICTED: galactinol--sucrose galactosy	0.997	0.994	0.765	0.0
356516648		781	PREDICTED: galactinol--sucrose galactosy	0.996	0.992	0.736	0.0
357461865		786	Galactinol-sucrose galactosyltransferase	0.994	0.984	0.737	0.0
225452378		775	PREDICTED: galactinol--sucrose galactosy	0.988	0.992	0.725	0.0
224131914		775	predicted protein [Populus trichocarpa]	0.985	0.989	0.694	0.0
75161213		798	RecName: Full=Galactinol--sucrose galact	0.994	0.969	0.684	0.0
255567355		787	Stachyose synthase precursor, putative [	0.996	0.984	0.686	0.0
449446690		784	PREDICTED: probable galactinol--sucrose	0.994	0.987	0.687	0.0
224133028		783	predicted protein [Populus trichocarpa]	0.996	0.989	0.695	0.0

>gi\|224133642\|ref\|XP_002321625.1\| predicted protein [Populus trichocarpa] gi\|222868621\|gb\|EEF05752.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score = 1298 bits (3358), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 603/766 (78%), Positives = 685/766 (89%), Gaps = 2/766 (0%)

Query: 13  IGLLDSQIPPSISLEGSNFLANGHPIFTQVPINIIATPSPFTSANKTKHTAGCFVGFDAD 72
           +GL+D + P SI+LEG NFLANGHP+ T+VP NIIATPSPF S+NKTK+  GCFVGFDA 
Sbjct: 1   MGLVDGEQPLSITLEGKNFLANGHPVLTEVPTNIIATPSPFLSSNKTKNLVGCFVGFDAH 60

Query: 73  ESSDRHVVPIGKLNGIRFMSIFRFKAWWTTHWVGNSGKDMEHETHLMILDKNDLGRPYVL 132
           E    HVVPIGKL+GIRFMSIFRFK WWTTHW+GNSGKD+EHET +MILD+NDLGRPYVL
Sbjct: 61  EPKSHHVVPIGKLSGIRFMSIFRFKVWWTTHWIGNSGKDVEHETQIMILDRNDLGRPYVL 120

Query: 133 LLPILEGPFRASLQPGTDNYVDMCVESGSSQIRCSSFRSCLYMRVGDDPYSLVKEAMKVV 192
           LLP+LEGPFRASLQPG ++ VD+CVESGSSQ+  SSFRSCLYM VGDDPYSLVKEAMKV+
Sbjct: 121 LLPLLEGPFRASLQPGVNDNVDICVESGSSQVCGSSFRSCLYMHVGDDPYSLVKEAMKVI 180

Query: 193 RVHLGTFKLLEEKTVPGIVDKFGWCTWDAFYLQVHPKGVYEGVKGLVEGGCPPGLVLIDD 252
           RVHLGTF+LLEEKT PGIVDKFGWCTWDAFYL VHPKGV EGVKGLVEGGCPPG+VLIDD
Sbjct: 181 RVHLGTFRLLEEKTPPGIVDKFGWCTWDAFYLTVHPKGVREGVKGLVEGGCPPGMVLIDD 240

Query: 253 GWQSICHDDEPIIDQEGMNRTSAGEQMPCRLIDFEENYKFRDYKSPRVPSNKGMGAFVRD 312
           GWQSICHDD+PI +QEGMNRT+AGEQMPCRL+ FEENYKFRDY+SP+VPS +GM AF+RD
Sbjct: 241 GWQSICHDDDPISEQEGMNRTAAGEQMPCRLVKFEENYKFRDYESPKVPSGRGMSAFIRD 300

Query: 313 LKDEFKSVEHVYVWHALCGYWGGIRPNVAG-MPESRLIAPKLSQGLQTTMEDLAVEKIVD 371
           LK+EF ++EHVY+WHA+CGYWGG+RP V G MPESR+I+PKLS  LQ TMEDLAV+KIV+
Sbjct: 301 LKEEFGTIEHVYIWHAVCGYWGGVRPAVGGNMPESRVISPKLSPSLQMTMEDLAVDKIVN 360

Query: 372 NGVGLVPPELVQNLYEGLHSHLESVGIDGVKVDVIHLLEMVAEDFGGRVELAKAYYKALT 431
           NGVGLV PEL   +YEGLHSHLES GIDGVKVDVIHLLEM++E+FGGRV LA+AYYKALT
Sbjct: 361 NGVGLVQPELAYKMYEGLHSHLESAGIDGVKVDVIHLLEMLSEEFGGRVALAEAYYKALT 420

Query: 432 ASVRKHFKGNGVIASMEHCNDFMYLGTETISLGRVGDDFWCSDPKGVKNGTFWLQGCHMV 491
           ASVRKHFKGNGVIASMEHCNDFM+LGTE I+LGRVGDDFWC+DP G  NGT+WLQGCHMV
Sbjct: 421 ASVRKHFKGNGVIASMEHCNDFMFLGTEAIALGRVGDDFWCTDPSGDPNGTYWLQGCHMV 480

Query: 492 HCAYNSLWMGNVIQPDWDMFQSTHPCAEFHAASRAISGGPIYISDSVGNHNFDLLKALVM 551
           HCAYNSLWMGN I PDWDMFQSTHPCAEFHAASRAISGGPIY+SDSVG HNF LLKALV+
Sbjct: 481 HCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGGPIYVSDSVGKHNFKLLKALVL 540

Query: 552 PDGSILRCQFYALPTRDCLFENPLHDGKTVLKIWNLNKHTGVLGLFNCQGGGWCSVTRKN 611
           PDGSILRCQ+YALP RDCLFE+PLHDGKT+LKIWNLNK+TGVLG+FNCQGGGWC V R+N
Sbjct: 541 PDGSILRCQYYALPARDCLFEDPLHDGKTMLKIWNLNKYTGVLGIFNCQGGGWCPVARRN 600

Query: 612 VGFSMFSNTLTCLASPNDIEWNNGKDPISVKGVDVFAVYKFQENKLKLLKFSDDLEVTVE 671
              + FS ++TC ASP DIEWN+GK PISVKGVDVFAVY F+E K++LLK S+ LE+++E
Sbjct: 601 KSANQFSQSVTCSASPKDIEWNSGKSPISVKGVDVFAVYMFKEKKVRLLKSSEKLEISLE 660

Query: 672 PFNFELLTVSPVTVLPKGSIQFAPIGLVNMLNTGGAVQSLAFDDDENLVRIEVKGCGEMK 731
           PFN++LLTVSPVTVLP+ SIQFAPIGLVNMLNTGGA+QS+   DDE+L+RI VKG GEM+
Sbjct: 661 PFNYDLLTVSPVTVLPRKSIQFAPIGLVNMLNTGGAIQSVMVVDDESLIRIGVKGSGEMR 720

Query: 732 VFASEKPLMCKVDGASAEFSYEDQMATVQVPWPNNSSKLTVVEFLF 777
           VFAS  P+ CK+DG   EF + DQM T+QVPWP +S KL+V+EFLF
Sbjct: 721 VFASGNPVSCKIDGVDVEFCFHDQMVTIQVPWP-SSPKLSVMEFLF 765

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|225456938\|ref\|XP_002281483.1\| PREDICTED: galactinol--sucrose galactosyltransferase [Vitis vinifera] gi\|297733731\|emb\|CBI14978.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356516648\|ref\|XP_003527005.1\| PREDICTED: galactinol--sucrose galactosyltransferase-like [Glycine max] gi\|187610414\|gb\|ACD13461.1\| raffionse synthase 2 [Glycine max]	Back alignment and taxonomy information

>gi\|357461865\|ref\|XP_003601214.1\| Galactinol-sucrose galactosyltransferase [Medicago truncatula] gi\|355490262\|gb\|AES71465.1\| Galactinol-sucrose galactosyltransferase [Medicago truncatula]	Back alignment and taxonomy information

>gi\|225452378\|ref\|XP_002275628.1\| PREDICTED: galactinol--sucrose galactosyltransferase [Vitis vinifera] gi\|296087624\|emb\|CBI34880.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|224131914\|ref\|XP_002328139.1\| predicted protein [Populus trichocarpa] gi\|222837654\|gb\|EEE76019.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|75161213\|sp\|Q8VWN6.1\|RFS_PEA RecName: Full=Galactinol--sucrose galactosyltransferase; AltName: Full=Raffinose synthase gi\|18181865\|emb\|CAD20127.2\| raffinose synthase [Pisum sativum]	Back alignment and taxonomy information

>gi\|255567355\|ref\|XP_002524657.1\| Stachyose synthase precursor, putative [Ricinus communis] gi\|223536018\|gb\|EEF37676.1\| Stachyose synthase precursor, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|449446690\|ref\|XP_004141104.1\| PREDICTED: probable galactinol--sucrose galactosyltransferase 5-like [Cucumis sativus] gi\|124057819\|gb\|ABD72603.1\| raffinose synthase [Cucumis sativus]	Back alignment and taxonomy information

>gi\|224133028\|ref\|XP_002327943.1\| predicted protein [Populus trichocarpa] gi\|222837352\|gb\|EEE75731.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		778
TAIR\|locus:2170528		783	SIP1 "AT5G40390" [Arabidopsis	0.988	0.982	0.634	1e-283
UNIPROTKB\|Q5VQG4		783	RFS "Galactinol--sucrose galac	0.983	0.977	0.628	1.6e-276
UNIPROTKB\|Q93XK2		853	STS1 "Stachyose synthase" [Pis	0.620	0.566	0.494	5.4e-195
TAIR\|locus:2141425		876	STS "AT4G01970" [Arabidopsis t	0.628	0.558	0.476	4.5e-189
TAIR\|locus:2103488		773	SIP2 "AT3G57520" [Arabidopsis	0.853	0.858	0.415	1.1e-150
TAIR\|locus:2020452		754	SIP1 "AT1G55740" [Arabidopsis	0.916	0.945	0.404	2.2e-146
UNIPROTKB\|Q97U94		648	galS "Alpha-galactosidase" [Su	0.152	0.183	0.390	3.9e-28
UNIPROTKB\|G4NBB7		908	MGG_11554 "Seed imbibition pro	0.359	0.308	0.290	1.1e-27
ASPGD\|ASPL0000010056		863	aglF [Emericella nidulans (tax	0.284	0.256	0.337	1e-23
UNIPROTKB\|Q8A170		693	BT_3797 "Possible alpha-galact	0.384	0.431	0.259	1e-10

TAIR\|locus:2170528 SIP1 "AT5G40390" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2726 (964.7 bits), Expect = 1.0e-283, P = 1.0e-283
 Identities = 500/788 (63%), Positives = 611/788 (77%)

Query:     2 APSLSKNVLDAIGLLDSQIPPSISLEGSNFLANGHPIFTQVPINIIATPSPFT---SANK 58
             +P L+K+  D+ G+          LE S  LANG  + T VP+N+  T SP+        
Sbjct:     3 SPCLTKS--DS-GINGVDFTEKFRLEDSTLLANGQVVLTDVPVNVTLTSSPYLVDKDGVP 59

Query:    59 TKHTAGCFVGFDAD-ESSDRHVVPIGKLNGIRFMSIFRFKAWWTTHWVGNSGKDMEHETH 117
                +AG F+GF+ D E    HV  IGKL  IRFMSIFRFK WWTTHWVG++G+D+E+ET 
Sbjct:    60 LDVSAGSFIGFNLDGEPKSHHVASIGKLKNIRFMSIFRFKVWWTTHWVGSNGRDIENETQ 119

Query:   118 LMILDKNDL--------GRPYVLLLPILEGPFRASLQPGTDNYVDMCVESGSSQIRCSSF 169
             ++ILD++          GRPYVLLLP+LEG FR+S Q G D+ V +CVESGS+++  S F
Sbjct:   120 IIILDQSGSDSGPGSGSGRPYVLLLPLLEGSFRSSFQSGEDDDVAVCVESGSTEVTGSEF 179

Query:   170 RSCLYMRVGDDPYSLVKEAMKVVRVHLGTFKLLEEKTVPGIVDKFGWCTWDAFYLQVHPK 229
             R  +Y+  GDDP+ LVK+AMKV+RVH+ TFKLLEEK+ PGIVDKFGWCTWDAFYL V+P 
Sbjct:   180 RQIVYVHAGDDPFKLVKDAMKVIRVHMNTFKLLEEKSPPGIVDKFGWCTWDAFYLTVNPD 239

Query:   230 GVYEGVKGLVEGGCPPGLVLIDDGWQSICHDDEPIIDQEGMNRTSAGEQMPCRLIDFEEN 289
             GV++GVK LV+GGCPPGLVLIDDGWQSI HD + I D EGMN T AGEQMPCRL+ FEEN
Sbjct:   240 GVHKGVKCLVDGGCPPGLVLIDDGWQSIGHDSDGI-DVEGMNITVAGEQMPCRLLKFEEN 298

Query:   290 YKFRDYKSPRVPSNKGMGAFVRDLKDEFKSVEHVYVWHALCGYWGGIRPNVAGMPESRLI 349
             +KF+DY SP+  ++ GM AFVRDLKDEF +V+++YVWHALCGYWGG+RP    +P S +I
Sbjct:   299 HKFKDYVSPKDQNDVGMKAFVRDLKDEFSTVDYIYVWHALCGYWGGLRPEAPALPPSTII 358

Query:   350 APKLSQGLQTTMEDLAVEKIVDNGVGLVPPELVQNLYEGLHSHLESVGIDGVKVDVIHLL 409
              P+LS GL+ TMEDLAV+KI++ G+G   P+L +  YEGLHSHL++ GIDGVKVDVIH+L
Sbjct:   359 RPELSPGLKLTMEDLAVDKIIETGIGFASPDLAKEFYEGLHSHLQNAGIDGVKVDVIHIL 418

Query:   410 EMVAEDFGGRVELAKAYYKALTASVRKHFKGNGVIASMEHCNDFMYLGTETISLGRVGDD 469
             EM+ + +GGRV+LAKAY+KALT+SV KHF GNGVIASMEHCNDFM+LGTE ISLGRVGDD
Sbjct:   419 EMLCQKYGGRVDLAKAYFKALTSSVNKHFNGNGVIASMEHCNDFMFLGTEAISLGRVGDD 478

Query:   470 FWCSDPKGVKNGTFWLQGCHMVHCAYNSLWMGNVIQPDWDMFQSTHPCAEFHAASRAISG 529
             FWC+DP G  NGTFWLQGCHMVHCAYNSLWMGN IQPDWDMFQSTHPCAEFHAASRAISG
Sbjct:   479 FWCTDPSGDPNGTFWLQGCHMVHCAYNSLWMGNFIQPDWDMFQSTHPCAEFHAASRAISG 538

Query:   530 GPIYISDSVGNHNFDLLKALVMPDGSILRCQFYALPTRDCLFENPLHDGKTVLKIWNLNK 589
             GPIYISD VG H+FDLLK LV+P+GSILRC++YALPTRD LFE+PLHDGKT+LKIWNLNK
Sbjct:   539 GPIYISDCVGKHDFDLLKRLVLPNGSILRCEYYALPTRDRLFEDPLHDGKTMLKIWNLNK 598

Query:   590 HTGVLGLFNCQGGGWCSVTRKNVGFSMFSNTLTCLASPNDIEWNNGKDPISVKGVDVFAV 649
             +TGV+G FNCQGGGWC  TR+N  FS   NTLT   SP D+EWN+G  PIS+  V+ FA+
Sbjct:   599 YTGVIGAFNCQGGGWCRETRRNQCFSECVNTLTATTSPKDVEWNSGSSPISIANVEEFAL 658

Query:   650 YKFQENKLKLLKFSDDLEVTVEPFNFELLTVSPVTVLPKGSIQFAPIGLVNMLNTGGAVQ 709
             +  Q  KL L   +DDLE+T+EPF FEL+TVSPV  +   S++FAPIGLVNMLNT GA++
Sbjct:   659 FLSQSKKLLLSGLNDDLELTLEPFKFELITVSPVVTIEGNSVRFAPIGLVNMLNTSGAIR 718

Query:   710 SLAFDDDENLVRIEVKGCGEMKVFASEKPLMCKVDGASAEFSYEDQMATVQVPWPNNSSK 769
             SL ++D+   V + V G GE +V+AS+KP+ C +DG   EF YED M  VQVPW +    
Sbjct:   719 SLVYNDES--VEVGVFGAGEFRVYASKKPVSCLIDGEVVEFGYEDSMVMVQVPW-SGPDG 775

Query:   770 LTVVEFLF 777
             L+ +++LF
Sbjct:   776 LSSIQYLF 783

GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005986 "sucrose biosynthetic process" evidence=IMP

GO:0010325 "raffinose family oligosaccharide biosynthetic process" evidence=IMP

GO:0019593 "mannitol biosynthetic process" evidence=IMP

GO:0047274 "galactinol-sucrose galactosyltransferase activity" evidence=ISS

GO:0009507 "chloroplast" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IEP

GO:0009414 "response to water deprivation" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IDA

UNIPROTKB\|Q5VQG4 RFS "Galactinol--sucrose galactosyltransferase" [Oryza sativa Japonica Group (taxid:39947)]	Back alignment and assigned GO terms

UNIPROTKB\|Q93XK2 STS1 "Stachyose synthase" [Pisum sativum (taxid:3888)]	Back alignment and assigned GO terms

TAIR\|locus:2141425 STS "AT4G01970" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2103488 SIP2 "AT3G57520" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2020452 SIP1 "AT1G55740" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|Q97U94 galS "Alpha-galactosidase" [Sulfolobus solfataricus P2 (taxid:273057)]	Back alignment and assigned GO terms

UNIPROTKB\|G4NBB7 MGG_11554 "Seed imbibition protein" [Magnaporthe oryzae 70-15 (taxid:242507)]	Back alignment and assigned GO terms

ASPGD\|ASPL0000010056 aglF [Emericella nidulans (taxid:162425)]	Back alignment and assigned GO terms

UNIPROTKB\|Q8A170 BT_3797 "Possible alpha-galactosidase" [Bacteroides thetaiotaomicron VPI-5482 (taxid:226186)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5VQG4	RFS_ORYSJ	2, ., 4, ., 1, ., 8, 2	0.6276	0.9832	0.9770	yes	no
Q8VWN6	RFS_PEA	2, ., 4, ., 1, ., 8, 2	0.6846	0.9948	0.9699	N/A	no
Q9FND9	RFS5_ARATH	2, ., 4, ., 1, ., 8, 2	0.6465	0.9614	0.9553	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.4.1.82	0.991
3rd Layer	2.4.1	0.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	fgenesh4_pg.C_LG_XV000565	galactinol-sucrose galactosyltransferase/hydrolase, hydrolyzing O-glycosyl compounds (EC-2.4.1.82) (765 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		778
PLN02711		777	PLN02711, PLN02711, Probable galactinol--sucrose g	0.0
pfam05691		742	pfam05691, Raffinose_syn, Raffinose synthase or se	0.0
PLN02684		750	PLN02684, PLN02684, Probable galactinol--sucrose g	0.0
PLN02982		865	PLN02982, PLN02982, galactinol-raffinose galactosy	0.0
PLN02355		758	PLN02355, PLN02355, probable galactinol--sucrose g	0.0
PLN02219		775	PLN02219, PLN02219, probable galactinol--sucrose g	0.0
PLN02982		865	PLN02982, PLN02982, galactinol-raffinose galactosy	5e-98

>gnl\|CDD\|215381 PLN02711, PLN02711, Probable galactinol--sucrose galactosyltransferase	Back alignment and domain information

 Score = 1540 bits (3989), Expect = 0.0
 Identities = 597/778 (76%), Positives = 673/778 (86%), Gaps = 2/778 (0%)

Query: 1   MAPSLSKNVLDAIGLLDSQIPPSISLEGSNFLANGHPIFTQVPINIIATPSPFTSANKTK 60
           MAPSLSK+   A+GL+D   P  I+LEGSNFLANGHP  + VP NI  TPSP+   NK  
Sbjct: 1   MAPSLSKSNSGAMGLVDGLNPSLITLEGSNFLANGHPFLSDVPDNITLTPSPYLPDNKPI 60

Query: 61  H-TAGCFVGFDADESSDRHVVPIGKLNGIRFMSIFRFKAWWTTHWVGNSGKDMEHETHLM 119
              AG FVGFDA E   RHVVPIGKL  IRFMSIFRFK WWTTHWVG++G+D+E+ET +M
Sbjct: 61  TVGAGSFVGFDAGEPKSRHVVPIGKLKNIRFMSIFRFKVWWTTHWVGSNGRDVENETQMM 120

Query: 120 ILDKNDLGRPYVLLLPILEGPFRASLQPGTDNYVDMCVESGSSQIRCSSFRSCLYMRVGD 179
           ILDK+D GRPYVLLLP++EGPFRASLQPG D+ VD+CVESGS+++  S FRS LYM  GD
Sbjct: 121 ILDKSDSGRPYVLLLPLIEGPFRASLQPGEDDNVDICVESGSTKVCGSEFRSVLYMHAGD 180

Query: 180 DPYSLVKEAMKVVRVHLGTFKLLEEKTVPGIVDKFGWCTWDAFYLQVHPKGVYEGVKGLV 239
           DPY LVK+AMKVVRVHLGTFKLLEEKT PGIVDKFGWCTWDAFYL VHP+GV+EGVKGLV
Sbjct: 181 DPYKLVKDAMKVVRVHLGTFKLLEEKTPPGIVDKFGWCTWDAFYLTVHPQGVWEGVKGLV 240

Query: 240 EGGCPPGLVLIDDGWQSICHDDEPIIDQEGMNRTSAGEQMPCRLIDFEENYKFRDYKSPR 299
           +GGCPPGLVLIDDGWQSICHD++PI DQEGMNRT AGEQMPCRL+ FEENYKFRDY SP+
Sbjct: 241 DGGCPPGLVLIDDGWQSICHDEDPISDQEGMNRTVAGEQMPCRLLKFEENYKFRDYVSPK 300

Query: 300 VPSNKGMGAFVRDLKDEFKSVEHVYVWHALCGYWGGIRPNVAGMPESRLIAPKLSQGLQT 359
             SNKGMGAF+RDLK+EFK+V++VYVWHALCGYWGG+RPNV G+PES+++APKLS GL+ 
Sbjct: 301 SLSNKGMGAFIRDLKEEFKTVDYVYVWHALCGYWGGLRPNVPGLPESKVVAPKLSPGLKM 360

Query: 360 TMEDLAVEKIVDNGVGLVPPELVQNLYEGLHSHLESVGIDGVKVDVIHLLEMVAEDFGGR 419
           TMEDLAV+KIV+NGVGLVPPEL   +YEGLHSHL+SVGIDGVKVDVIHLLEM+ E++GGR
Sbjct: 361 TMEDLAVDKIVNNGVGLVPPELAYQMYEGLHSHLQSVGIDGVKVDVIHLLEMLCEEYGGR 420

Query: 420 VELAKAYYKALTASVRKHFKGNGVIASMEHCNDFMYLGTETISLGRVGDDFWCSDPKGVK 479
           VELAKAYYKALTASVRKHF GNGVIASMEHCNDFM+LGTE ISLGRVGDDFWC+DP G  
Sbjct: 421 VELAKAYYKALTASVRKHFNGNGVIASMEHCNDFMFLGTEAISLGRVGDDFWCTDPSGDP 480

Query: 480 NGTFWLQGCHMVHCAYNSLWMGNVIQPDWDMFQSTHPCAEFHAASRAISGGPIYISDSVG 539
           NGTFWLQGCHMVHCAYNSLWMGN I PDWDMFQSTHPCAEFHAASRAISGGPIY+SDSVG
Sbjct: 481 NGTFWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGGPIYVSDSVG 540

Query: 540 NHNFDLLKALVMPDGSILRCQFYALPTRDCLFENPLHDGKTVLKIWNLNKHTGVLGLFNC 599
            HNF LLK LV+PDGSILRCQ+YALPTRDCLFE+PLHDGKT+LKIWNLNK TGV+G FNC
Sbjct: 541 KHNFPLLKRLVLPDGSILRCQYYALPTRDCLFEDPLHDGKTMLKIWNLNKFTGVIGAFNC 600

Query: 600 QGGGWCSVTRKNVGFSMFSNTLTCLASPNDIEWNNGKDPISVKGVDVFAVYKFQENKLKL 659
           QGGGWC  TR+N   S FS+T+T  ASP DIEWN+GK PIS++GV VFAVY FQ  KL L
Sbjct: 601 QGGGWCRETRRNKCASQFSHTVTAKASPKDIEWNSGKSPISIEGVQVFAVYLFQSKKLVL 660

Query: 660 LKFSDDLEVTVEPFNFELLTVSPVTVLPKGSIQFAPIGLVNMLNTGGAVQSLAFDDDENL 719
            K S++LE+++EPFNFEL+TVSPVT LP  SIQFAPIGLVNMLNTGGA+QSLA+DD E+ 
Sbjct: 661 SKPSENLEISLEPFNFELITVSPVTTLPGKSIQFAPIGLVNMLNTGGAIQSLAYDDAESS 720

Query: 720 VRIEVKGCGEMKVFASEKPLMCKVDGASAEFSYEDQMATVQVPWPNNSSKLTVVEFLF 777
           V+I VKG GEM+VFASEKP  CK+DG   EF YED M  VQVPW   SS L+++E+LF
Sbjct: 721 VQIGVKGSGEMRVFASEKPRSCKIDGEEVEFGYEDCMVVVQVPWS-GSSGLSLIEYLF 777

Length = 777

>gnl\|CDD\|218695 pfam05691, Raffinose_syn, Raffinose synthase or seed inhibition protein Sip1	Back alignment and domain information

>gnl\|CDD\|166325 PLN02684, PLN02684, Probable galactinol--sucrose galactosyltransferase	Back alignment and domain information

>gnl\|CDD\|215532 PLN02982, PLN02982, galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds	Back alignment and domain information

>gnl\|CDD\|215203 PLN02355, PLN02355, probable galactinol--sucrose galactosyltransferase 1	Back alignment and domain information

>gnl\|CDD\|165863 PLN02219, PLN02219, probable galactinol--sucrose galactosyltransferase 2	Back alignment and domain information

>gnl\|CDD\|215532 PLN02982, PLN02982, galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		778
PLN02711		777	Probable galactinol--sucrose galactosyltransferase	100.0
PLN02982		865	galactinol-raffinose galactosyltransferase/ghydrol	100.0
PLN02219		775	probable galactinol--sucrose galactosyltransferase	100.0
PLN02684		750	Probable galactinol--sucrose galactosyltransferase	100.0
PLN02355		758	probable galactinol--sucrose galactosyltransferase	100.0
PF05691		747	Raffinose_syn: Raffinose synthase or seed imbibiti	100.0
PLN02692		412	alpha-galactosidase	100.0
PLN02229		427	alpha-galactosidase	100.0
PLN02808		386	alpha-galactosidase	100.0
PLN03231		357	putative alpha-galactosidase; Provisional	100.0
PLN02899		633	alpha-galactosidase	99.97
KOG2366		414	consensus Alpha-D-galactosidase (melibiase) [Carbo	99.93
PF02065		394	Melibiase: Melibiase; InterPro: IPR000111 O-Glycos	99.86
COG3345		687	GalA Alpha-galactosidase [Carbohydrate transport a	99.72
cd06592		303	GH31_glucosidase_KIAA1161 KIAA1161 is an uncharact	99.38
cd06593		308	GH31_xylosidase_YicI YicI alpha-xylosidase is a gl	98.96
PRK10658		665	putative alpha-glucosidase; Provisional	98.81
cd06598		317	GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide	98.65
PF01055		441	Glyco_hydro_31: Glycosyl hydrolases family 31 ; In	98.56
cd06595		292	GH31_xylosidase_XylS-like This family represents a	98.51
PRK10426		635	alpha-glucosidase; Provisional	98.5
cd06599		317	GH31_glycosidase_Aec37 Glycosyl hydrolase family 3	98.49
cd06591		319	GH31_xylosidase_XylS XylS is a glycosyl hydrolase	98.47
cd06604		339	GH31_glucosidase_II_MalA Alpha-glucosidase II (alp	98.47
cd06602		339	GH31_MGAM_SI_GAA This family includes the followin	98.47
cd06597		340	GH31_transferase_CtsY CtsY (cyclic tetrasaccharide	98.44
cd06594		317	GH31_glucosidase_YihQ YihQ is a bacterial alpha-gl	98.41
cd06589		265	GH31 The enzymes of glycosyl hydrolase family 31 (	98.4
cd06600		317	GH31_MGAM-like This family includes the following	98.33
cd06601		332	GH31_lyase_GLase GLases (alpha-1,4-glucan lyases)	98.16
PLN02763		978	hydrolase, hydrolyzing O-glycosyl compounds	98.13
cd06603		339	GH31_GANC_GANAB_alpha This family includes the clo	98.07
PF10566		273	Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro:	97.92
COG1501		772	Alpha-glucosidases, family 31 of glycosyl hydrolas	97.9
KOG1065		805	consensus Maltase glucoamylase and related hydrola	96.59
PF13200		316	DUF4015: Putative glycosyl hydrolase domain	89.81
KOG1066		915	consensus Glucosidase II catalytic (alpha) subunit	82.67
TIGR01515		613	branching_enzym alpha-1,4-glucan:alpha-1,4-glucan	81.49

>PLN02711 Probable galactinol--sucrose galactosyltransferase	Back alignment and domain information

Probab=100.00  E-value=4.5e-222  Score=1871.06  Aligned_cols=772  Identities=76%  Similarity=1.302  Sum_probs=730.5

Q ss_pred             CCCccchhhhccccccccCCCCceeEeCCeEEEcCeeccccCCCceEEecCCCCCCCCC-ccccceeeccccCCCCCcee
Q 004032            1 MAPSLSKNVLDAIGLLDSQIPPSISLEGSNFLANGHPIFTQVPINIIATPSPFTSANKT-KHTAGCFVGFDADESSDRHV   79 (778)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~~~~   79 (778)
                      |+||+||.--.+.|+.+||+++.|+|+||+|+|+|+++|++||+||++||++....... ....|+||||++++|+|||+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~v~g~~~l~~vp~nv~~tp~~~~~~~~~~~~~~g~flG~~~~~~~srhv   80 (777)
T PLN02711          1 MAPSLSKSNSGAMGLVDGLNPSLITLEGSNFLANGHPFLSDVPDNITLTPSPYLPDNKPITVGAGSFVGFDAGEPKSRHV   80 (777)
T ss_pred             CCCcccCCCCcccccccccccceEEEeCCeEEECCEEeecCCCCceEecCCCCcccccccccccceEEeeecCCCCccee
Confidence            89999999999999999999999999999999999999999999999999776432211 22359999999999999999


Q ss_pred             eecCcccceeeEEeeecCCccceeeccCCCCCCCccceEEEEEecCCCCCEEEEEEeeeCCeEEEecCCCCCcEEEEEEc
Q 004032           80 VPIGKLNGIRFMSIFRFKAWWTTHWVGNSGKDMEHETHLMILDKNDLGRPYVLLLPILEGPFRASLQPGTDNYVDMCVES  159 (778)
Q Consensus        80 ~~lG~~~~~r~~~l~R~k~wW~~p~~G~~~~~l~~etq~ll~~~~~~~~~y~v~lpi~~~~~~~~l~~~~~~~~~l~~~s  159 (778)
                      ++||+++++|||||||||+|||+||+|++++|||.|||||++|.++++..|+|||||++|+||++||++.+++++||+||
T Consensus        81 ~~~G~l~~~rfm~~fRfK~WWmt~~~G~~g~dip~eTQ~ll~e~~~~~~~y~~~lP~~eg~fRa~Lq~~~~d~~~ic~es  160 (777)
T PLN02711         81 VPIGKLKNIRFMSIFRFKVWWTTHWVGSNGRDVENETQMMILDKSDSGRPYVLLLPLIEGPFRASLQPGEDDNVDICVES  160 (777)
T ss_pred             eecccccCcEeeeeehhhhhccchhhcCCCCCCChhheEEEEEccCCCceEEEEEeecCCceEEEecCCCCCcEEEEEec
Confidence            99999999999999999999999999999999999999999999864568999999999999999999999999999999


Q ss_pred             CCccccccccceEEEEEEcCChHHHHHHHHHHHHHHhccCcccccccCCCcccCcccccccccccccCHHHHHHHHHHHH
Q 004032          160 GSSQIRCSSFRSCLYMRVGDDPYSLVKEAMKVVRVHLGTFKLLEEKTVPGIVDKFGWCTWDAFYLQVHPKGVYEGVKGLV  239 (778)
Q Consensus       160 g~~~v~~~~~~~~v~v~~g~dp~~~i~~A~~~~~~~~~tf~~~~~k~~P~~~d~~GWCTWdaf~~~vte~~V~~~l~~L~  239 (778)
                      |+++|.++++.+++|||+|+|||++|++|++++++|++||++|++|++|+++|+||||||||||++|||++|+++|++|+
T Consensus       161 g~~~v~~~~~~~~~~i~~g~~Py~~i~~A~~~~~~~l~tf~~reeK~~P~~~D~fGWCTWdAfy~~Vt~egI~~gl~~L~  240 (777)
T PLN02711        161 GSTKVCGSEFRSVLYMHAGDDPYKLVKDAMKVVRVHLGTFKLLEEKTPPGIVDKFGWCTWDAFYLTVHPQGVWEGVKGLV  240 (777)
T ss_pred             CCcceeccccceEEEEEcCCCHHHHHHHHHHHHHHHhcccchhhhccCCcccccceEEehhHhcccCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hCCCCCcEEEEeCCCCcccCCCCccccccccccCccCCCCCCcccccccCCcCCCCCCCCCCCCCChHHHHHHHHhhcCC
Q 004032          240 EGGCPPGLVLIDDGWQSICHDDEPIIDQEGMNRTSAGEQMPCRLIDFEENYKFRDYKSPRVPSNKGMGAFVRDLKDEFKS  319 (778)
Q Consensus       240 ~~Gip~~~vIIDDGWQ~~~~d~~~~~~~a~~~~~~~~~~~~~rL~~~~~n~KFP~~~~~~~~~~~GLk~~v~~Ik~~~g~  319 (778)
                      ++|+||+|||||||||+++++.+....+..++.+++|+||.+||++|++|.|||++.++++.++.|||++|+.||++|++
T Consensus       241 ~~Gip~~~vIIDDGWQsi~~d~~~~~~~~~~~~~~~g~q~~~rL~~f~en~KF~~~~~~~~~~p~Glk~~v~~iK~~~~~  320 (777)
T PLN02711        241 DGGCPPGLVLIDDGWQSICHDEDPISDQEGMNRTVAGEQMPCRLLKFEENYKFRDYVSPKSLSNKGMGAFIRDLKEEFKT  320 (777)
T ss_pred             hCCCCccEEEEcCCcccccccCcccccccccccccccchhhhhhccccccccccccccccCCCCCcHHHHHHHHHhhCCC
Confidence            99999999999999999877643211112247788999999999999999999986555567889999999999999977


Q ss_pred             ccEEEEEeeecccccCCCCCCCCCCCceeeccccCCCcccccchhhhcceecCCCCCcChHHHHHHHHHHHHHHHHhCCC
Q 004032          320 VEHVYVWHALCGYWGGIRPNVAGMPESRLIAPKLSQGLQTTMEDLAVEKIVDNGVGLVPPELVQNLYEGLHSHLESVGID  399 (778)
Q Consensus       320 lk~V~vWHAl~GYWgGI~P~~~~~~~~~l~~~~~s~g~~~~~~d~a~~~~~~~G~glv~p~~~~~fY~~l~~~Las~GVD  399 (778)
                      ||||||||||+||||||+|++++++++++++|+++||+..+++|+++|++..+|+++++|+++++||++||+||+++|||
T Consensus       321 vk~VyVWHAL~GYWGGv~P~~~~~~~~~~~~p~~spg~~~~~~d~~~d~~~~~g~glv~Pe~~~~FY~~~hs~Las~GVD  400 (777)
T PLN02711        321 VDYVYVWHALCGYWGGLRPNVPGLPESKVVAPKLSPGLKMTMEDLAVDKIVNNGVGLVPPELAYQMYEGLHSHLQSVGID  400 (777)
T ss_pred             CCEEEEeeeccCcccCcCCCCCCCccceeeccccCcccccccccccccccccCcccccCHHHHHHHHHHHHHHHHHcCCC
Confidence            99999999999999999999988888999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEccchhhhhhhcccCChHHHHHHHHHHHHHHHHhccCCCceEeecCCCCcccccc-cccceeeccccccCcCCCCCC
Q 004032          400 GVKVDVIHLLEMVAEDFGGRVELAKAYYKALTASVRKHFKGNGVIASMEHCNDFMYLG-TETISLGRVGDDFWCSDPKGV  478 (778)
Q Consensus       400 gVKvD~q~~l~~l~~~~~gr~~l~~ay~~AL~~s~~~~F~g~~iI~CMs~~~~~l~~~-~~~~~~~R~SDDf~p~~p~g~  478 (778)
                      |||||+|++|+++++++++|++++++||+||++|++|||++|++|+||||+++++|++ +++++. |+||||||++|.+.
T Consensus       401 gVKVDvQ~~Le~l~~~~Ggrv~la~ay~~ALe~S~~r~F~~ng~I~CMs~~~d~~~~~tk~~av~-R~SDDF~p~dP~sh  479 (777)
T PLN02711        401 GVKVDVIHLLEMLCEEYGGRVELAKAYYKALTASVRKHFNGNGVIASMEHCNDFMFLGTEAISLG-RVGDDFWCTDPSGD  479 (777)
T ss_pred             eEEEchhhhHhhhcccCCcHHHHHHHHHHHHHHHHHHhCCCCCeEeecccCchhhhccCccccee-eecccccCCCCccc
Confidence            9999999999999988999999999999999999999999999999999999998864 666777 99999999999998


Q ss_pred             C---CCcccccchhHHHHhhhhhcccCCcCCCccccccCcchhHHHHHHHHHcCCCEEeecCCCCCcHHhhhhhhCCCCc
Q 004032          479 K---NGTFWLQGCHMVHCAYNSLWMGNVIQPDWDMFQSTHPCAEFHAASRAISGGPIYISDSVGNHNFDLLKALVMPDGS  555 (778)
Q Consensus       479 p---~w~q~sh~~Hi~~~a~Nsl~~g~~~~PDwDMF~s~h~~a~~HaaaRAisGgPvyiSD~pg~hd~~lL~~lv~pdG~  555 (778)
                      |   ||+|   +.||++|||||||||+++|||||||||.||+|+|||++||||||||||||+||+|||+||||||+|||+
T Consensus       480 ~~g~~W~~---~~Hi~~~AyNSLllg~~v~PDWDMF~S~Hp~A~~HAaaRAisGGPIYVSD~pG~Hdf~LLk~LvlpdGs  556 (777)
T PLN02711        480 PNGTFWLQ---GCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGGPIYVSDSVGKHNFPLLKRLVLPDGS  556 (777)
T ss_pred             cccccccc---cceeeeehhhhhhhcccccCCchhhhccCchHHHHHHHHhhcCCCEEEecCCCCccHHHHHhhhCCCCc
Confidence            8   8998   789999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeccccccCCCccccccccCCCCceeEEEEecCCcceEEEEEecCCCcccccccccccccccccceeeeecCCCcccCCC
Q 004032          556 ILRCQFYALPTRDCLFENPLHDGKTVLKIWNLNKHTGVLGLFNCQGGGWCSVTRKNVGFSMFSNTLTCLASPNDIEWNNG  635 (778)
Q Consensus       556 ilR~~~pg~pt~d~lf~dp~~d~~~lLki~n~n~~~gvlg~FN~~ga~w~~~~~~~~~~~~~~~~~t~~v~~~Dv~w~~~  635 (778)
                      ||||++||+|||||||.||++|++++|||||+|+++||||+|||||++||++++++++|++++.++|+.|+++||+|+++
T Consensus       557 IlR~~~pg~PtrDcLF~DP~~dg~slLKIwn~nk~tGviG~FNcqgagW~~~~~~~~~~~~~~~~vt~~v~~~Dv~w~~~  636 (777)
T PLN02711        557 ILRCQYYALPTRDCLFEDPLHDGKTMLKIWNLNKFTGVIGAFNCQGGGWCRETRRNKCASQFSHTVTAKASPKDIEWNSG  636 (777)
T ss_pred             EecccCCCCccchhhccccccCCceEEEEEeecCCcceEEEEEecCCcccchhhhcccccCCCCceEEEEchHHhcccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             CCCCcCCCcceEEEEEeccCeEEEecCCCcEEEEecCCcEEEEEEeeeeeeCCCCeEEEEeehhhhccCccceeeeeeec
Q 004032          636 KDPISVKGVDVFAVYKFQENKLKLLKFSDDLEVTVEPFNFELLTVSPVTVLPKGSIQFAPIGLVNMLNTGGAVQSLAFDD  715 (778)
Q Consensus       636 ~~~~~~~~~~~~~vy~~~sg~l~~l~~~~~~~v~L~~~~~ei~t~~Pv~~~~~~~~~~A~iGL~~~~~~~~av~~~~~~~  715 (778)
                      ..+++..+.++|+||+|++|++.++++++.++|+|++++|||||+|||+.+.++.++||||||+||||++|||+++++.+
T Consensus       637 ~~~~~~~~~~~y~vy~~~s~~l~~l~~~~~l~vtL~~~~~Eiftv~Pv~~~~~~~~~fApIGL~~m~nsggAv~~~~~~~  716 (777)
T PLN02711        637 KSPISIEGVQVFAVYLFQSKKLVLSKPSENLEISLEPFNFELITVSPVTTLPGKSIQFAPIGLVNMLNTGGAIQSLAYDD  716 (777)
T ss_pred             CCCcCccCceeEEEEEecCCeEEECCCCCceEEEecCcceEEEEEeeeEEecCCCceEEecchhhhccCceeEEEEEecc
Confidence            77777777889999999999999999999999999999999999999999975449999999999999999999999975


Q ss_pred             CCceEEEEEeecCeeeEEecCCCeeeEeCCeEeeEEEcCcEEEEEecCCCCCCCceeEEEEe
Q 004032          716 DENLVRIEVKGCGEMKVFASEKPLMCKVDGASAEFSYEDQMATVQVPWPNNSSKLTVVEFLF  777 (778)
Q Consensus       716 ~~~~v~v~~kg~G~~~~y~s~~P~~~~vdg~~~~f~y~~gl~~~~l~~~~~~~~~~~v~~~~  777 (778)
                      .+++++|+|||+|+||+|+|.+|++|.|||++++|+|++||++|+|||++++ ++|+|||+|
T Consensus       717 ~~~~v~v~vkg~G~lg~YsS~~P~~c~v~~~~~~f~y~~g~~~~~~~~~~~~-~~~~v~~~~  777 (777)
T PLN02711        717 AESSVQIGVKGSGEMRVFASEKPRSCKIDGEEVEFGYEDCMVVVQVPWSGSS-GLSLIEYLF  777 (777)
T ss_pred             CCCeEEEEEEeeeEEEEEecCCCeEEEECCEEeeeEecCCEEEEEecCCCcC-CceeEEEeC
Confidence            5558999999999999999999999999999999999999999999999955 999999986

>PLN02982 galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds	Back alignment and domain information

>PLN02219 probable galactinol--sucrose galactosyltransferase 2	Back alignment and domain information

>PLN02684 Probable galactinol--sucrose galactosyltransferase	Back alignment and domain information

>PLN02355 probable galactinol--sucrose galactosyltransferase 1	Back alignment and domain information

>PF05691 Raffinose_syn: Raffinose synthase or seed imbibition protein Sip1; InterPro: IPR008811 This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins	Back alignment and domain information

>PLN02692 alpha-galactosidase	Back alignment and domain information

>PLN02229 alpha-galactosidase	Back alignment and domain information

>PLN02808 alpha-galactosidase	Back alignment and domain information

>PLN03231 putative alpha-galactosidase; Provisional	Back alignment and domain information

>PLN02899 alpha-galactosidase	Back alignment and domain information

>KOG2366 consensus Alpha-D-galactosidase (melibiase) [Carbohydrate transport and metabolism]	Back alignment and domain information

>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3	Back alignment and domain information

>COG3345 GalA Alpha-galactosidase [Carbohydrate transport and metabolism]	Back alignment and domain information

>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase	Back alignment and domain information

>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose	Back alignment and domain information

>PRK10658 putative alpha-glucosidase; Provisional	Back alignment and domain information

>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY	Back alignment and domain information

>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3	Back alignment and domain information

>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus	Back alignment and domain information

>PRK10426 alpha-glucosidase; Provisional	Back alignment and domain information

>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37	Back alignment and domain information

>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate	Back alignment and domain information

>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities	Back alignment and domain information

>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase	Back alignment and domain information

>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ	Back alignment and domain information

>cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride	Back alignment and domain information

>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase	Back alignment and domain information

>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II	Back alignment and domain information

>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end	Back alignment and domain information

>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds	Back alignment and domain information

>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB)	Back alignment and domain information

>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3	Back alignment and domain information

>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism]	Back alignment and domain information

>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism]	Back alignment and domain information

>PF13200 DUF4015: Putative glycosyl hydrolase domain	Back alignment and domain information

>KOG1066 consensus Glucosidase II catalytic (alpha) subunit and related enzymes, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		778
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-09
3cc1_A		433	BH1870 protein, putative alpha-N-acetylgalactosami	2e-07
1zy9_A		564	Alpha-galactosidase; TM1192, struc genomics, joint	3e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 59.9 bits (144), Expect = 3e-09
 Identities = 78/576 (13%), Positives = 169/576 (29%), Gaps = 180/576 (31%)

Query: 108 SGKDMEHETHLMILDKNDLGRPYVLLLPILEGP-------FRASLQPGTDNYVDMCVESG 160
           S ++++H    +I+ K+ +     L   +L              L+    NY    +   
Sbjct: 47  SKEEIDH----IIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRI---NY-KFLMSPI 98

Query: 161 SSQIRCSSFRSCLYM----RVGDDPYSLVKEAMKVVRVHLGTF---KLLEEKTVPGIVDK 213
            ++ R  S  + +Y+    R+ +D     K    V R+         LLE +    ++  
Sbjct: 99  KTEQRQPSMMTRMYIEQRDRLYNDNQVFAK--YNVSRLQPYLKLRQALLELRPAKNVL-- 154

Query: 214 FGWCTWDAFYLQVHPKGVYEGVKG-----LVEGGCPPGLVL--IDDG--WQSI--CHDDE 262
                       +       GV G     +    C    V   +D    W ++  C+  E
Sbjct: 155 ------------ID------GVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPE 196

Query: 263 PI----------IDQEGMNRTSAGEQMPCRLIDFEENYK--FRDYKSPR-------VPSN 303
            +          ID    +R+     +  R+   +   +   +             V + 
Sbjct: 197 TVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNA 256

Query: 304 KGMGAF---------VRDLKDEFKSV---------EHVYVWHALCGY-----------WG 334
           K   AF          R      K V          H+ + H                + 
Sbjct: 257 KAWNAFNLSCKILLTTRF-----KQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYL 311

Query: 335 GIRPN------VAGMPES-RLIAPKLSQGLQT-----TMEDLAVEKIVDNGVGLVPPELV 382
             RP       +   P    +IA  +  GL T      +    +  I+++ + ++ P   
Sbjct: 312 DCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEY 371

Query: 383 QNLYEGLHSHLESVGI--DGVKV--DVIHLL--EMVAEDFGGRVELAKAYYKALTASVRK 436
           + +++ L        +      +   ++ L+  +++  D    V + K +  +L   V K
Sbjct: 372 RKMFDRL-------SVFPPSAHIPTILLSLIWFDVIKSDV--MVVVNKLHKYSL---VEK 419

Query: 437 HFKGNGV------IASMEHCNDFMYLGTETISLGRVGDDFWCSDPKGVKNGTFWLQGCHM 490
             K + +      +       +   L    +    +   F   D        ++      
Sbjct: 420 QPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYS---- 475

Query: 491 VHCAYNSLWMGNVIQPD-WDMFQSTHPCAEF------HAASRAISGGPI----------- 532
            H  ++   + N+  P+   +F+       F      H ++   + G I           
Sbjct: 476 -HIGHH---LKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYK 531

Query: 533 -YISDSVGNHNF------DLLKALVMPDGSILRCQF 561
            YI D   N          +L  L   + +++  ++
Sbjct: 532 PYICD---NDPKYERLVNAILDFLPKIEENLICSKY 564

PyMOL of 1vt4

>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125} Length = 433	Back alignment and structure

>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 Length = 564	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		778
3cc1_A		433	BH1870 protein, putative alpha-N-acetylgalactosami	100.0
1uas_A		362	Alpha-galactosidase; TIM-barrel, beta-alpha-barrel	100.0
1zy9_A		564	Alpha-galactosidase; TM1192, struc genomics, joint	100.0
3hg3_A		404	Alpha-galactosidase A; glycoprotein, carbohydrate-	100.0
1szn_A		417	Alpha-galactosidase; (beta/alpha)8 barrel,TWO doma	100.0
3a5v_A		397	Alpha-galactosidase; beta/alpha barrel, N-glycosyl	100.0
4do4_A		400	Alpha-N-acetylgalactosaminidase; pharmacological c	100.0
3lrk_A		479	Alpha-galactosidase 1; tetramer, GH27, glycoprotei	100.0
3a21_A		614	Putative secreted alpha-galactosidase; beta-alpha-	100.0
4fnq_A		729	Alpha-galactosidase AGAB; glycoside hydrolase, hyd	99.92
2xn2_A		732	Alpha-galactosidase; hydrolase, glycosidase; HET:	99.88
2yfo_A		720	Alpha-galactosidase-sucrose kinase agask; hydrolas	99.86
3mi6_A		745	Alpha-galactosidase; NESG, structural genomics, PS	99.85
2f2h_A		773	Putative family 31 glucosidase YICI; BETA8alpha8 b	99.15
2g3m_A		693	Maltase, alpha-glucosidase; hydrolase, glycoside h	98.98
4ba0_A		817	Alpha-glucosidase, putative, ADG31B; hydrolase; HE	98.91
3nsx_A		666	Alpha-glucosidase; structural genomics, PSI-2, pro	98.79
2xvl_A		1020	Alpha-xylosidase, putative, XYL31A; hydrolase, gly	98.68
3l4y_A		875	Maltase-glucoamylase, intestinal; glycoside hydrol	98.66
3lpp_A		898	Sucrase-isomaltase; glycoside hydrolase family 31,	98.66
3a24_A		641	Alpha-galactosidase; glycoside hydrolase family 97	98.43
3top_A		908	Maltase-glucoamylase, intestinal; membrane, hydrol	97.88
2d73_A		738	Alpha-glucosidase SUSB; glycoside hydrolase family	97.51
2x2h_A		1027	Alpha-1,4-glucan lyase isozyme 1; anhydrofructose	97.08
3k1d_A		722	1,4-alpha-glucan-branching enzyme; mycobacterium t	83.23
3zss_A		695	Putative glucanohydrolase PEP1A; alpha-glucan bios	80.79

>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125}	Back alignment and structure

Probab=100.00  E-value=4.1e-41  Score=377.39  Aligned_cols=375  Identities=17%  Similarity=0.238  Sum_probs=247.6

Q ss_pred             CcccccccccccccCHHHHHHHHHHH----HhCCCCCcEEEEeCCCCcccCCCCccccccccccCccCCCCCCccccccc
Q 004032          213 KFGWCTWDAFYLQVHPKGVYEGVKGL----VEGGCPPGLVLIDDGWQSICHDDEPIIDQEGMNRTSAGEQMPCRLIDFEE  288 (778)
Q Consensus       213 ~~GWCTWdaf~~~vte~~V~~~l~~L----~~~Gip~~~vIIDDGWQ~~~~d~~~~~~~a~~~~~~~~~~~~~rL~~~~~  288 (778)
                      .||||||++||+++||++|++.++.|    ++.|+  ++++||||||....+..++++.++.       . ...+.++.+
T Consensus        13 p~gwnsW~~~~~~i~e~~i~~~ad~~~~gl~~~G~--~~~~iDDgW~~~~~~~~~y~~~~~~-------~-~d~~G~~~~   82 (433)
T 3cc1_A           13 PMGWNSWDCYGASVTEEEVLGNAEYMANHLKKYGW--EYIVVDIQWYEPTANSSAYNPFAPL-------C-MDEYGRLLP   82 (433)
T ss_dssp             CEEEESHHHHTTCCCHHHHHHHHHHHHHHTGGGTC--CEEEECSCTTCCCTTSTTCCTTSCS-------C-BCTTSCBCC
T ss_pred             CEEEEChhhhCCcCCHHHHHHHHHHHHhcchhhCC--eEEEECCCcCCCCCccccccccccc-------c-cCCCCCEeE
Confidence            48999999999999999999999999    55555  4999999999875442222100000       0 012444554


Q ss_pred             -CCcCCCCCCCCCCCCCChHHHHHHHHhhcCCccEEEEEeeecccccCCCCCCCCCCCceeeccccCCCcccccchhhhc
Q 004032          289 -NYKFRDYKSPRVPSNKGMGAFVRDLKDEFKSVEHVYVWHALCGYWGGIRPNVAGMPESRLIAPKLSQGLQTTMEDLAVE  367 (778)
Q Consensus       289 -n~KFP~~~~~~~~~~~GLk~~v~~Ik~~~g~lk~V~vWHAl~GYWgGI~P~~~~~~~~~l~~~~~s~g~~~~~~d~a~~  367 (778)
                       ++|||+..     .+.|||+++++||++ | +| +|||+.+.-.+..+.|+++...            ..-+.+|++..
T Consensus        83 ~~~kFP~~~-----~~~Gl~~l~~~ih~~-G-lk-~Giw~~p~i~~~~v~~~s~~~~------------~~~~~~di~~~  142 (433)
T 3cc1_A           83 ATNRFPSAK-----NGAGFKPLSDAIHDL-G-LK-FGIHIMRGIPRQAVYENSPVLG------------STKTAREIAHT  142 (433)
T ss_dssp             CTTTCGGGT-----TTTTTHHHHHHHHHT-T-CE-EEEEEESSEEHHHHHHTCBCTT------------SSCBHHHHEET
T ss_pred             CCccCCCcc-----cCCCHHHHHHHHHHc-C-Ce-eEEEeCCCCchhccCCCCcccc------------ccceecccccC
Confidence             48999321     124999999999999 8 99 7999865211112344433211            00111222111


Q ss_pred             cee---cCC---CCCcChHHHHHHHHHHHHHHHHhCCCEEEEccchhhhhhhcccCChHHHHHHHHHHHHHHHHhccCCC
Q 004032          368 KIV---DNG---VGLVPPELVQNLYEGLHSHLESVGIDGVKVDVIHLLEMVAEDFGGRVELAKAYYKALTASVRKHFKGN  441 (778)
Q Consensus       368 ~~~---~~G---~glv~p~~~~~fY~~l~~~Las~GVDgVKvD~q~~l~~l~~~~~gr~~l~~ay~~AL~~s~~~~F~g~  441 (778)
                      ..+   ..+   +++.+| ++++||+.++++|++|||||||+|+|+. ..+.. +  ..+..++|++||+++      ++
T Consensus       143 ~~~~~~~~~~~~lD~~~p-~~~~~~~~~~~~l~~~GvDyvK~D~~~~-~~~~~-~--~~~~~~~~~~aL~~~------gr  211 (433)
T 3cc1_A          143 NSICPWNTDMYGVDPTKE-GAQSYYNSLFELYAQWGVDFVKVDDIAA-SRLYD-T--HLEEIKMIQRAIQAC------GR  211 (433)
T ss_dssp             TCCBTTBTTEEEECTTST-THHHHHHHHHHHHHHTTCCEEEEESCSC-TTSSC-C--CHHHHHHHHHHHHHS------SS
T ss_pred             CcccCCCCCceeecCCCH-HHHHHHHHHHHHHHHcCCCEEEeCCccc-ccCCc-c--cHHHHHHHHHHHHhc------CC
Confidence            111   011   334445 6999999999999999999999999975 22211 1  345566777777654      88


Q ss_pred             ceEeecCCCCcc----cccccccceeeccccccCcCCCCCCCCCcccccchhHHH-HhhhhhcccCCcCCCccccccCc-
Q 004032          442 GVIASMEHCNDF----MYLGTETISLGRVGDDFWCSDPKGVKNGTFWLQGCHMVH-CAYNSLWMGNVIQPDWDMFQSTH-  515 (778)
Q Consensus       442 ~iI~CMs~~~~~----l~~~~~~~~~~R~SDDf~p~~p~g~p~w~q~sh~~Hi~~-~a~Nsl~~g~~~~PDwDMF~s~h-  515 (778)
                      +|+.|||+.+..    .+..+.+++| |+|+|+|++++        .  ..|++. +++++.++++++|||+|||+++| 
T Consensus       212 ~i~~slc~g~~~~~~~~~~~~~~n~w-R~s~D~~~~w~--------~--~~~~~~~~~~~~~~~~~g~~nD~Dml~vg~~  280 (433)
T 3cc1_A          212 PMVLSLSPGPAPIKYAHHFKTNANMW-RITDDFWDDWS--------L--LYQMFERCEVWEKHIGTGHWPDCGMLPLGHI  280 (433)
T ss_dssp             CCEEECCCSBSSEESCSSSCCTTGGG-CCEECCCSCHH--------H--HHHHHHHHHHHHHSCCCSCCCBCCCBCCSEE
T ss_pred             CEEEEecCCCCChhhhhhhhhhCcEE-EeccCccccHH--------H--HHHHHHHHHHHHhhcCCCccCChHHhcccCc
Confidence            999999986322    2456788999 99999999875        3  345555 45677778888999999999985 


Q ss_pred             ------------------chhHHHHHHHHHcCCCEEeecCCCCCc---HHhhh--hhh--CCCCceeccccccCCCcccc
Q 004032          516 ------------------PCAEFHAASRAISGGPIYISDSVGNHN---FDLLK--ALV--MPDGSILRCQFYALPTRDCL  570 (778)
Q Consensus       516 ------------------~~a~~HaaaRAisGgPvyiSD~pg~hd---~~lL~--~lv--~pdG~ilR~~~pg~pt~d~l  570 (778)
                                        .+.++|+++|||+++||++||.+.+-+   ++||+  .++  -+||..-|      |.    
T Consensus       281 g~~~~~~~~~~~~~~lt~~E~rt~~alwai~~spL~ig~dl~~~~~~~~~lL~N~eviavnqdg~~~~------~v----  350 (433)
T 3cc1_A          281 GIRSVDGPGGDRWTRFTKDEQLTMMNLWAICHSPLMFGGELRDNDEWTLSLLTNEGILSINQKSVLNR------FV----  350 (433)
T ss_dssp             CTTCSSSSSSSEECSSCHHHHHHHHHHHHHTTCCEEECSCGGGCCHHHHHHHCCHHHHHHHHHCEEEE------EE----
T ss_pred             cccccccccccccCCCCHHHHHHHHHHHHHhcCceEecCccccCCHHHHHHhcChhheeecCCCcCce------ee----
Confidence                              467889999999999999999988765   45554  222  15554333      21    


Q ss_pred             ccccCCCCceeEEEEec--CCcceEEEEEecCCCcccccccccccccccccceeeeecCCCcccCCCCCCCcCCCcceEE
Q 004032          571 FENPLHDGKTVLKIWNL--NKHTGVLGLFNCQGGGWCSVTRKNVGFSMFSNTLTCLASPNDIEWNNGKDPISVKGVDVFA  648 (778)
Q Consensus       571 f~dp~~d~~~lLki~n~--n~~~gvlg~FN~~ga~w~~~~~~~~~~~~~~~~~t~~v~~~Dv~w~~~~~~~~~~~~~~~~  648 (778)
                      +.    ++.  +.||..  ..+.-+|++||.+...               .+++  +..+++...         +  .|-
T Consensus       351 ~~----~~~--~~vw~~~l~~g~~~val~N~~~~~---------------~~~~--~~~~~lgl~---------~--~~~  396 (433)
T 3cc1_A          351 YR----EED--KVAWAANGRNGEAYVALFNLHDQQ---------------KTLQ--FRLDMVGIM---------E--TVQ  396 (433)
T ss_dssp             EE----ETT--EEEEEEECSSSCEEEEEEECSSSC---------------EEEE--ECGGGTTCC---------S--CEE
T ss_pred             Ee----cCC--cEEEEEECCCCCEEEEEEeCCCCC---------------EEEE--EEHHHcCCC---------C--ceE
Confidence            11    121  456654  3456789999976421               1122  333444311         2  578


Q ss_pred             EEEeccCe-EEEecCCCcEEEEecCCcEEEEEEeee
Q 004032          649 VYKFQENK-LKLLKFSDDLEVTVEPFNFELLTVSPV  683 (778)
Q Consensus       649 vy~~~sg~-l~~l~~~~~~~v~L~~~~~ei~t~~Pv  683 (778)
                      |+..-+++ +.....+..++++|++.++.+|.+.|.
T Consensus       397 v~Dlw~~~~~g~~~~~~~~~~~v~~hg~~l~~l~~~  432 (433)
T 3cc1_A          397 LFNVWDRSFLQSLAPSESFQIELKPHQSMMLKLSPD  432 (433)
T ss_dssp             EEETTTTEEEEEECTTCCEEEEECTTCEEEEEEEEC
T ss_pred             EEECCCCCccccccCCceEEEEECCCcEEEEEEEeC
Confidence            88887777 333433348999999999999999985

PyMOL of 3cc1

>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1	Back alignment and structure

>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13	Back alignment and structure

>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A*	Back alignment and structure

>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A*	Back alignment and structure

>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea}	Back alignment and structure

>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A*	Back alignment and structure

>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A*	Back alignment and structure

>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A*	Back alignment and structure

>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A*	Back alignment and structure

>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A*	Back alignment and structure

>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A*	Back alignment and structure

>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis}	Back alignment and structure

>2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A*	Back alignment and structure

>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A*	Back alignment and structure

>4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A*	Back alignment and structure

>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A*	Back alignment and structure

>2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A*	Back alignment and structure

>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A*	Back alignment and structure

>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A*	Back alignment and structure

>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}	Back alignment and structure

>3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A*	Back alignment and structure

>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*	Back alignment and structure

>2x2h_A Alpha-1,4-glucan lyase isozyme 1; anhydrofructose pathway, glycoside hydrolase family 3 starch binding domain; 2.06A {Gracilariopsis lemaneiformis} PDB: 2x2i_A* 2x2j_A*	Back alignment and structure

>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}	Back alignment and structure

>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A*	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		778
d1zy9a2		348	c.1.8.13 (A:178-525) Alpha-galactosidase GalA cata	4e-15
d1szna2		314	c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [T	3e-14
d1uasa2		273	c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [	5e-05
d1r46a2		292	c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens)	1e-04

>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Length = 348	Back information, alignment and structure


class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: YicI catalytic domain-like
domain: Alpha-galactosidase GalA catalytic domain
species: Thermotoga maritima [TaxId: 2336]

 Score = 75.2 bits (184), Expect = 4e-15
 Identities = 40/343 (11%), Positives = 87/343 (25%), Gaps = 65/343 (18%)

Query: 205 KTVPGIVDKFGWCTWDAFYLQVHPKGVYEGVKGLVEGGCPPGLVLIDDGWQSICHDDEPI 264
           K  P      GWC+W  ++L +  +   + +K          +  IDD ++         
Sbjct: 4   KHTP-----TGWCSWYHYFLDLTWEETLKNLKLAKNFPF--EVFQIDDAYEK-------- 48

Query: 265 IDQEGMNRTSAGEQMPCRLIDFEENYKFRDYKSPRVPSNKGMGAFVRDLKDEFKSVEHVY 324
                             + D+              PS + M   + +           +
Sbjct: 49  -----------------DIGDWLVTRG-------DFPSVEEMAKVIAENGFIPGIWTAPF 84

Query: 325 VWHALCGYWGGIRPNVAGMPESRLIAPKLSQGLQTTMEDLAVEKIVDNGVGLVPPELVQN 384
                        P+              +   +    DL+ ++             V N
Sbjct: 85  SVSE-TSDVFNEHPDWVVKENGEPKMAYRNWNKKIYALDLSKDE-------------VLN 130

Query: 385 LYEGLHSHLESVGIDGVKVDVIHLLEMVAEDFGGRVELAKAYYKALTASVRKHFKGNGVI 444
               L S L  +G    K+D +    +  E     +   +A+ K +    +      G  
Sbjct: 131 WLFDLFSSLRKMGYRYFKIDFLFAGAVPGERKKN-ITPIQAFRKGIETIRKAV----GED 185

Query: 445 ASMEHCNDFMYLGTETISLGRVGDDFWCSDPKGVKNGTFWLQGCHMVHCAYNSLWMGNVI 504
           + +  C   +      +   R+G D      + +++         + +            
Sbjct: 186 SFILGCGSPLLPAVGCVDGMRIGPDTAPFWGEHIEDNGAPAARWALRNAITRYFMHDRFW 245

Query: 505 QPDWDMFQSTHPC-------AEFHAASRAISGGPIYISDSVGN 540
             D D                E ++ +  +    I  SD +  
Sbjct: 246 LNDPDCLILREEKTDLTQKEKELYSYTCGVLDNMIIESDDLSL 288

PyMOL of d1zy9a2

>d1szna2 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [TaxId: 51453]} Length = 314	Back information, alignment and structure

>d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Length = 273	Back information, alignment and structure

>d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Length = 292	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		778
d1szna2		314	Melibiase {Trichoderma reesei [TaxId: 51453]}	100.0
d1uasa2		273	Melibiase {Rice (Oryza sativa) [TaxId: 4530]}	100.0
d1r46a2		292	Melibiase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1zy9a2		348	Alpha-galactosidase GalA catalytic domain {Thermot	99.97
d1ktba2		293	Melibiase {Chicken (Gallus gallus) [TaxId: 9031]}	99.97
d2f2ha4		338	Putative glucosidase YicI, domain 2 {Escherichia c	99.08
d1g5aa2		554	Amylosucrase {Neisseria polysaccharea [TaxId: 489]	83.4
d1gcya2		357	G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase	81.91

>d1szna2 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [TaxId: 51453]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Melibiase
species: Trichoderma reesei [TaxId: 51453]

Probab=100.00  E-value=9e-36  Score=314.22  Aligned_cols=270  Identities=15%  Similarity=0.141  Sum_probs=197.6

Q ss_pred             cccccccccccccCHHHHHHHHHHHHhCCCC---CcEEEEeCCCCcccCCCCccccccccccCccCCCCCCccccccc-C
Q 004032          214 FGWCTWDAFYLQVHPKGVYEGVKGLVEGGCP---PGLVLIDDGWQSICHDDEPIIDQEGMNRTSAGEQMPCRLIDFEE-N  289 (778)
Q Consensus       214 ~GWCTWdaf~~~vte~~V~~~l~~L~~~Gip---~~~vIIDDGWQ~~~~d~~~~~~~a~~~~~~~~~~~~~rL~~~~~-n  289 (778)
                      ||||||++|++++||++|++.++.|++.|++   .++++||||||...++.                     +.+|.+ +
T Consensus        14 ~GwnSW~~~~~~i~e~~i~~~a~~l~e~gl~~~G~~~~~iDdGW~~~~~~~---------------------~G~~~~d~   72 (314)
T d1szna2          14 LGWNSWNAYHCDIDESKFLSAAELIVSSGLLDAGYNYVNIDDCWSMKDGRV---------------------DGHIAPNA   72 (314)
T ss_dssp             EEEESHHHHTTCCCHHHHHHHHHHHHHTTHHHHTCCEEECCSSCBCTTCCB---------------------TTBCCBCT
T ss_pred             CcccchhhhcccCCHHHHHHHHHHHHHcCccccCcEEEEECCCccCCCCCC---------------------CCCeeeCH
Confidence            8999999999999999999999999987753   47999999999875542                     223454 5


Q ss_pred             CcCCCCCCCCCCCCCChHHHHHHHHhhcCCccEEEEEeeecccccCCCCCCCCCCCceeeccccCCCcccccchhhhcce
Q 004032          290 YKFRDYKSPRVPSNKGMGAFVRDLKDEFKSVEHVYVWHALCGYWGGIRPNVAGMPESRLIAPKLSQGLQTTMEDLAVEKI  369 (778)
Q Consensus       290 ~KFP~~~~~~~~~~~GLk~~v~~Ik~~~g~lk~V~vWHAl~GYWgGI~P~~~~~~~~~l~~~~~s~g~~~~~~d~a~~~~  369 (778)
                      +|||          +|||+++++||++ | +| +|+|+++.++|..-+|+....+                ..+.  ...
T Consensus        73 ~kFP----------~Gl~~~~~~i~~~-G-~k-~Giw~~p~~~~~~~~p~~~~~~----------------~~~~--~~~  121 (314)
T d1szna2          73 TRFP----------DGIDGLAKKVHAL-G-LK-LGIYSTAGTATCAGYPASLGYE----------------DVDA--ADF  121 (314)
T ss_dssp             TTCT----------THHHHHHHHHHHT-T-CE-EEEEEESSSBCTTSCBCCTTCH----------------HHHH--HHH
T ss_pred             hhcC----------CchHHHHHHHHhc-C-Ce-EEEeecccccccCCCccccccc----------------ccch--hhh
Confidence            8999          8999999999999 8 99 7999999888877666542210                0010  001


Q ss_pred             ecCCCCCcChHHHHHHHHHHHHHHHHhCCCEEEEccchhhhhhhc------ccCChHHHHHHHHHHHHHHHHhccCCCce
Q 004032          370 VDNGVGLVPPELVQNLYEGLHSHLESVGIDGVKVDVIHLLEMVAE------DFGGRVELAKAYYKALTASVRKHFKGNGV  443 (778)
Q Consensus       370 ~~~G~glv~p~~~~~fY~~l~~~Las~GVDgVKvD~q~~l~~l~~------~~~gr~~l~~ay~~AL~~s~~~~F~g~~i  443 (778)
                      ...|+.+..| +++.+++.+++.++++|||++|+|.+........      .+..........+.+|.+++++.+++.-+
T Consensus       122 ~~~~~d~~~~-d~~~~~~~~~~~~~~~g~d~~K~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i  200 (314)
T d1szna2         122 ADWGVDYLKY-DNCNVPSDWQDEYVACNPDFVKTGPNGTCTTALDPTLAPPGYDWSTSKSAERFGAMRNALAKQSHEIVL  200 (314)
T ss_dssp             HHTTCCEEEE-ECCCCCGGGSCSSBCCCTTTSCCBGGGBCCTTTCTTBCCTTCCGGGSHHHHHHHHHHHHHHTSSSCCEE
T ss_pred             hhcCCccccc-hHHHHHHHHHHHHHHhCCceEEecccccchhccCcccCccccCcchhhHHHHHHHHHHHHHHhCCCeEE
Confidence            1123333333 5566777778888999999999999875433221      11111122334455777778888777778


Q ss_pred             EeecCCCCcc-cccccccceeeccccccCcCCCCCCCCCcccccchhHHHHhhhhhcccCCcCCCccccccCc-----ch
Q 004032          444 IASMEHCNDF-MYLGTETISLGRVGDDFWCSDPKGVKNGTFWLQGCHMVHCAYNSLWMGNVIQPDWDMFQSTH-----PC  517 (778)
Q Consensus       444 I~CMs~~~~~-l~~~~~~~~~~R~SDDf~p~~p~g~p~w~q~sh~~Hi~~~a~Nsl~~g~~~~PDwDMF~s~h-----~~  517 (778)
                      ..||++.... .+....++++ |+|+|+++.+.        ..+ -|+..+++++.+.+...|||+||++.++     .+
T Consensus       201 ~~c~~~~~~~~~~~~~~~~~~-R~s~D~~~~w~--------~~~-~~~~~~~~~~~~~~~~~~~DpDml~~g~~~lt~~e  270 (314)
T d1szna2         201 SMCIWGQADVFSWGNSTGISW-RMSDDISPNWG--------SVT-RILNLNSFKLNSVDFWGHNDADMLEVGNGNLTAAE  270 (314)
T ss_dssp             EECCTTGGGHHHHGGGTCSEE-ECSSCCCSSHH--------HHH-HHHHHHHTCGGGCBTTBEEECCSCCTTCTTCCHHH
T ss_pred             EecCCCCCCchhhhhhcccce-eecCCcccccc--------hHH-HHHHHHHHHHHHhcCCccCCchhcccCCCCCCHHH
Confidence            8888876543 2445677888 99999999865        333 3667788999998999999999998753     36


Q ss_pred             hHHHHHHHHHcCCCEEeecCCCCCc---HHhh
Q 004032          518 AEFHAASRAISGGPIYISDSVGNHN---FDLL  546 (778)
Q Consensus       518 a~~HaaaRAisGgPvyiSD~pg~hd---~~lL  546 (778)
                      .++|+++||++|+|++|||.+.+.+   .+||
T Consensus       271 ~r~~~sl~a~~~~pl~~g~dl~~~~~~~~~ll  302 (314)
T d1szna2         271 TRTHFALWAAMKSPLLIGTDLAQLSQNNINLL  302 (314)
T ss_dssp             HHHHHHHHHHTTCCEEECSCGGGCCHHHHHHH
T ss_pred             HHHHHHHHHHHhCchhccCCcccCCHHHHHHh
Confidence            7899999999999999998865544   5555

PyMOL of d1szna2

>d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]}	Back information, alignment and structure

>d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d1ktba2 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]}	Back information, alignment and structure

>d2f2ha4 c.1.8.13 (A:248-585) Putative glucosidase YicI, domain 2 {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]}	Back information, alignment and structure

>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]}	Back information, alignment and structure