Citrus Sinensis ID: 004065

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770------

MQVETKSPRQEFLLLAYQSFGIVFSDLSISPLYVYKSTFSGSLRHYQNEDAVFGAFSVIFWTLTLLSLFKYVIIVLNADDNGEGGTFSLYALLCRHAKVGLLPNHQAADEELTTYHDPGYSSRNMTSSPFKVFMERHKKTKTGLLLLVLLGAALVFSIGVLTPAISVLSSIDGLQVQLQNRHTRMVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTLLTSLVIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPAFYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCIVRNGYKDVPNSGDDFENDIVMSIAEFIQMEAEGFTNLDAPVDGWLAVVRTSEKFGKRLARSESDSKEESCSSSFPITGSCSKSPALQKLQSMYEQESPDLNYRPRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSYIIGHSRIKAKWNAPFLKRFVINVAYSFLRKNSRSPAVFLNIPHICLIEVGINYYL

ccccccccHHHHHHHHHHHHcEEcccccccHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHEEEEEEEccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHcccccHHHHHHHHHHHHHHHcccEEccHHHHHHHHHccccccccccccEEHHHHHHHHHHHHHHHcccccHHHccHHHHHHHHHHHHHHHHHHHHHcccccEEEEccHHHHHHHHHHccccEEEEcHHHHHHcccHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEccccccccEEEcHHHHHHHHHHHHEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHcccccccccccEEEEEcccccccHHHHHHHHHHcccccEEEEEEEEEEEcccccccccEEEEEEEccccccEEEEEEEEEcccccccHHHHHHHHHHHccEEEEccccccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccEEEEEEcEEEEcccccHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEEEEc

cccccccHHHHHHHHHHHHccEEEcccccccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHEEEEEEcccccccHHHHHHHHHHHHHccccccccccHHHHHHHccccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHEccccccHHHHHHHHHcccEEccccccccEEHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHEcccHHHHHHccHHHHHHHHHHcccccEEEccEEEEEEccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEccccccEEEcHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcHHHEEEHHHccccHHHHHHHccccccEEcccEEEEHHHHHccccHHHHHHHHccccHEEEEEEEEEEEcccccccHHHEEEEEEcccccccEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccEEEEEEccccccccHHHHHHHHHHHHHHHccEEEEEEccEEEEccccHHHHHHHHHHHHHHHHHHcccccEEEEcccHHHEEEcEEEEc

mqvetkspRQEFLLLAYQSFgivfsdlsisplyvykstfsgslrhyqnedavFGAFSVIFWTLTLLSLFKYVIIVLnaddngeggtFSLYALLCRHAKvgllpnhqaadeelttyhdpgyssrnmtsspFKVFMERHKKTKTGLLLLVLLGAALVFSIGVLTPAISVLSSIDGLQVQLQNRHTRMVVFLACLVLIGHFVlqyrgthrvaFMFAPVVILWLLSTtgigiynvikwnprvyqalSPYYIYKFFKytgrdgwtsLAGLFLcttgseamfadlgqfTAGSIKLAFCCIVFPCLVLQYMGQAAflsknfsaaplsfhasipdplrwpVLVVATLAAIVASQSVISATFSTVkqcyalgcfprvkvvhkarwvrgqvyipeINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTLLTSLVIYFVWNQSLFLALLYVLFFGSIEIIYLSSacmkipnggwvALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKWILAqgsslgivrvpgIGLLFtelangvpptfthfltnlpaFYQVVVFICVktvplpyvhhkeryligrigpksyRMYRCIVRngykdvpnsgddfenDIVMSIAEFIQMEaegftnldapvdgWLAVVRTSEKFGKRLarsesdskeescsssfpitgscskspalQKLQSMYeqespdlnyrprvqfkltdtkfkDLRVKEELLQLLEAKCAGVSYIIGHSrikakwnapfLKRFVINVAYSFlrknsrspavflniphicLIEVGINYYL

mqvetksprqEFLLLAYQSFGIVFSDLSISPLYVYKSTFSGSLRHYQNEDAVFGAFSVIFWTLTLLSLFKYVIIVLNADDNGEGGTFSLYALLCRHAKVGLLPNHQAADEELTTyhdpgyssrnmTSSPFKVFMERHKKTKTGLLLLVLLGAALVFSIGVLTPAISVLSSIDGLQVQLQNRHTRMVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTLLTSLVIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPAFYQVVVFICVKTvplpyvhhkeryligrigpksyRMYRCIVRNgykdvpnsgdDFENDIVMSIAEFIQMEAEGFTNLDAPVDGWLAVVRTSEKFGkrlarsesdskeescsssfpitgscskSPALQKLQSMYEqespdlnyrprVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSYIIGHSRIKAKWNAPFLKRFVINVAYSFLRKNSrspavflniphiCLIEVGINYYL

MQVETKSPRQEFLLLAYQSFGIVFSDLSISPLYVYKSTFSGSLRHYQNEDAVFGAFSVIFWTLTLLSLFKYVIIVLNADDNGEGGTFSLYALLCRHAKVGLLPNHQAADEELTTYHDPGYSSRNMTSSPFKVFMERHKKTKTgllllvllgaalvFSIGVLTPAISVLSSIDGLQVQLQNRHTRMVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLSKNFSAAPLSFHASIPDPLRWPvlvvatlaaivasqsvisaTFSTVKQCYALGCFPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMAltfvstlltslvIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPAFYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCIVRNGYKDVPNSGDDFENDIVMSIAEFIQMEAEGFTNLDAPVDGWLAVVRTSEKFGKRLARsesdskeescsssFPITGSCSKSPALQKLQSMYEQESPDLNYRPRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSYIIGHSRIKAKWNAPFLKRFVINVAYSFLRKNSRSPAVFLNIPHICLIEVGINYYL

**********EFLLLAYQSFGIVFSDLSISPLYVYKSTFSGSLRHYQNEDAVFGAFSVIFWTLTLLSLFKYVIIVLNADDNGEGGTFSLYALLCRHAKVGLLPNHQA**********************FKVFMERHKKTKTGLLLLVLLGAALVFSIGVLTPAISVLSSIDGLQVQLQNRHTRMVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTLLTSLVIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPAFYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCIVRNGYKDVPNSGDDFENDIVMSIAEFIQMEAEGFTNLDAPVDGWLAVVRT*****************************************************PRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSYIIGHSRIKAKWNAPFLKRFVINVAYSFLRKNSRSPAVFLNIPHICLIEVGINYY*

*************LLAYQSFGIVFSDLSISPLYVYKSTFSGSLRHYQNEDAVFGAFSVIFWTLTLLSLFKYVIIVLNADDNGEGGTFSLYALLCRHAKVGLLPN****DE********************KVFMERHKKTKTGLLLLVLLGAALVFSIGVLTPAISVLSSIDGLQVQLQNRHTRMVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTLLTSLVIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPAFYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCIVRNGYKDVPNSGDDFENDIVMSIAEFIQMEAE*********************************************************************************************QLLEAKCAGVSYIIGHSRIKAKWNAPFLKRFVINVAYSFLRKNSRSPAVFLNIPHICLIEVGINYYL

********RQEFLLLAYQSFGIVFSDLSISPLYVYKSTFSGSLRHYQNEDAVFGAFSVIFWTLTLLSLFKYVIIVLNADDNGEGGTFSLYALLCRHAKVGLLPNHQAADEELTTYHDPGYSSRNMTSSPFKVFMERHKKTKTGLLLLVLLGAALVFSIGVLTPAISVLSSIDGLQVQLQNRHTRMVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTLLTSLVIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPAFYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCIVRNGYKDVPNSGDDFENDIVMSIAEFIQMEAEGFTNLDAPVDGWLAVVRTSEKF************************SCSKSPALQKLQSMYEQESPDLNYRPRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSYIIGHSRIKAKWNAPFLKRFVINVAYSFLRKNSRSPAVFLNIPHICLIEVGINYYL

*****KSPRQEFLLLAYQSFGIVFSDLSISPLYVYKSTFSGSLRHYQNEDAVFGAFSVIFWTLTLLSLFKYVIIVLNADDNGEGGTFSLYALLCRHAKVGLLPNHQAADEELTTYHDPGYSSRNMTSSPFKVFMERHKKTKTGLLLLVLLGAALVFSIGVLTPAISVLSSIDGLQVQLQNRHTRMVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTLLTSLVIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPAFYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCIVRNGYKDVPNSGDDFENDIVMSIAEFIQMEAEG********************************************************************YRPRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSYIIGHSRIKAKWNAPFLKRFVINVAYSFLRKNSRSPAVFLNIPHICLIEVGINYYL

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		776	2.2.26 [Sep-21-2011]
Q9FE38		775	Potassium transporter 3 O	yes	no	0.985	0.987	0.659	0.0
Q942X8		783	Probable potassium transp	yes	no	0.988	0.979	0.588	0.0
Q8H3P9		811	Potassium transporter 7 O	no	no	0.990	0.948	0.605	0.0
Q5ZC87		808	Probable potassium transp	no	no	0.992	0.952	0.556	0.0
Q9LD18		789	Potassium transporter 4 O	no	no	0.978	0.961	0.577	0.0
Q8W4I4		782	Potassium transporter 6 O	no	no	0.979	0.971	0.486	0.0
Q7XIV8		788	Probable potassium transp	no	no	0.972	0.958	0.470	0.0
Q8VXB5		793	Putative potassium transp	no	no	0.988	0.967	0.491	0.0
Q9M7J9		781	Potassium transporter 8 O	no	no	0.963	0.957	0.480	0.0
O22881		794	Potassium transporter 2 O	no	no	0.976	0.954	0.479	0.0

>sp\|Q9FE38\|POT3_ARATH Potassium transporter 3 OS=Arabidopsis thaliana GN=POT3 PE=1 SV=1	Back alignment and function desciption

 Score = 1048 bits (2709), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 507/769 (65%), Positives = 628/769 (81%), Gaps = 4/769 (0%)

Query: 10  QEFLLLAYQSFGIVFSDLSISPLYVYKSTFSGSLRHYQNEDAVFGAFSVIFWTLTLLSLF 69
            + LLLAYQSFG+VF DLSISPLYVYK TF G LRH+Q ED +FGAFS+IFWT+TLLSL 
Sbjct: 9   NQILLLAYQSFGLVFGDLSISPLYVYKCTFYGGLRHHQTEDTIFGAFSLIFWTITLLSLI 68

Query: 70  KYVIIVLNADDNGEGGTFSLYALLCRHAKVGLLPNHQAADEELTTYHDPGYSSRNMTSSP 129
           KY++ VL+ADDNGEGG F+LYALLCRHA+  LLPN QAADEE++TY+ PG +SRN+ SS 
Sbjct: 69  KYMVFVLSADDNGEGGIFALYALLCRHARFSLLPNQQAADEEISTYYGPGDASRNLPSSA 128

Query: 130 FKVFMERHKKTKTGLLLLVLLGAALVFSIGVLTPAISVLSSIDGLQVQLQNRHTRMVVFL 189
           FK  +ER+K++KT LL+LVL+G ++V +IGVLTPAISV SSIDGL  +   +H+  VV +
Sbjct: 129 FKSLIERNKRSKTALLVLVLVGTSMVITIGVLTPAISVSSSIDGLVAKTSLKHS-TVVMI 187

Query: 190 ACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYK 249
           AC +L+G FVLQ+RGT++VAF+FAP++ILWLL     G+YN++ WNP VY+ALSPYYIY 
Sbjct: 188 ACALLVGLFVLQHRGTNKVAFLFAPIMILWLLIIATAGVYNIVTWNPSVYKALSPYYIYV 247

Query: 250 FFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAF 309
           FF+ TG DGW SL G+ LC TG+EA+FA+LGQFTA SI+ AFCC+V+PCLVLQYMGQAAF
Sbjct: 248 FFRDTGIDGWLSLGGILLCITGTEAIFAELGQFTATSIRFAFCCVVYPCLVLQYMGQAAF 307

Query: 310 LSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFPRVK 369
           LSKNFSA P SF++SIPDP  WPVL++A LAA+VASQ+VI ATFS VKQCYALGCFPRVK
Sbjct: 308 LSKNFSALPSSFYSSIPDPFFWPVLMMAMLAAMVASQAVIFATFSIVKQCYALGCFPRVK 367

Query: 370 VVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTLLTSLV 429
           +VHK RWV GQ+YIPEINWV+MIL+LAVT+ FRDT  +A A+G ACM L FV+T L  L+
Sbjct: 368 IVHKPRWVLGQIYIPEINWVVMILTLAVTICFRDTRHIAFAFGLACMTLAFVTTWLMPLI 427

Query: 430 IYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSR 489
           I FVWN+++  ++L++LFFG+IE+I+++SA +KIP GGW+ L+ +  F  I YVWHYGSR
Sbjct: 428 INFVWNRNIVFSVLFILFFGTIELIFVASALVKIPKGGWITLLLSLFFTFITYVWHYGSR 487

Query: 490 KRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPAFYQVV 549
           K+YL D HNKVPMK IL+ G SLGI++VPG+GL++TELA+GVP TF HFLTNLPAFYQVV
Sbjct: 488 KKYLCDQHNKVPMKSILSLGPSLGIIKVPGMGLIYTELASGVPATFKHFLTNLPAFYQVV 547

Query: 550 VFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCIVRNGYKDVPNSGDDFENDIVMSIAE 609
           VF+C KTVP+PYV  KERYLIGRIGPK+YRMYRCI+R GYKDV   GDDFE+++VMSIAE
Sbjct: 548 VFVCCKTVPIPYVPQKERYLIGRIGPKTYRMYRCIIRAGYKDVNKDGDDFEDELVMSIAE 607

Query: 610 FIQMEAEGF--TNLDAPVDGWLAVVRTSEKFGKRLARSESDSKEESCSSSFPITGSCSKS 667
           FIQ+E+EG+  +N D  +DG LAVV+ S KFG RL+RS S++     S S   T + SKS
Sbjct: 608 FIQLESEGYGGSNTDRSIDGRLAVVKASNKFGTRLSRSISEANIAGSSRS-QTTVTNSKS 666

Query: 668 PALQKLQSMYEQESPDLNYRPRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSYIIGHSR 727
           PAL KL++ YEQE P L+ R   QF+  DTKF+  +VKEEL  L+ AK A V+YI+GH  
Sbjct: 667 PALLKLRAEYEQELPRLSMRRMFQFRPMDTKFRQPQVKEELFDLVNAKDAEVAYIVGHGH 726

Query: 728 IKAKWNAPFLKRFVINVAYSFLRKNSRSPAVFLNIPHICLIEVGINYYL 776
           +KAK N+ F+K+ V+NVAYSFLRKN RSP V LNIPHICLI+VG+NYYL
Sbjct: 727 VKAKRNSVFVKQLVVNVAYSFLRKNCRSPGVMLNIPHICLIKVGMNYYL 775

High-affinity potassium transporter required for tip growth of root hairs.
Arabidopsis thaliana (taxid: 3702)

>sp\|Q942X8\|HAK2_ORYSJ Probable potassium transporter 2 OS=Oryza sativa subsp. japonica GN=HAK2 PE=2 SV=1	Back alignment and function description

>sp\|Q8H3P9\|HAK7_ORYSJ Potassium transporter 7 OS=Oryza sativa subsp. japonica GN=HAK7 PE=2 SV=3	Back alignment and function description

>sp\|Q5ZC87\|HAK3_ORYSJ Probable potassium transporter 3 OS=Oryza sativa subsp. japonica GN=HAK3 PE=2 SV=1	Back alignment and function description

>sp\|Q9LD18\|POT4_ARATH Potassium transporter 4 OS=Arabidopsis thaliana GN=POT4 PE=1 SV=2	Back alignment and function description

>sp\|Q8W4I4\|POT6_ARATH Potassium transporter 6 OS=Arabidopsis thaliana GN=POT6 PE=2 SV=1	Back alignment and function description

>sp\|Q7XIV8\|HAK9_ORYSJ Probable potassium transporter 9 OS=Oryza sativa subsp. japonica GN=HAK9 PE=2 SV=1	Back alignment and function description

>sp\|Q8VXB5\|HAK8_ORYSJ Putative potassium transporter 8 OS=Oryza sativa subsp. japonica GN=HAK8 PE=2 SV=2	Back alignment and function description

>sp\|Q9M7J9\|POT8_ARATH Potassium transporter 8 OS=Arabidopsis thaliana GN=POT8 PE=2 SV=2	Back alignment and function description

>sp\|O22881\|POT2_ARATH Potassium transporter 2 OS=Arabidopsis thaliana GN=POT2 PE=1 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		776
224075034		776	predicted protein [Populus trichocarpa]	0.996	0.996	0.692	0.0
14149030		776	putative high-affinity potassium uptake	0.996	0.996	0.689	0.0
255537637		777	Potassium transporter, putative [Ricinus	0.997	0.996	0.677	0.0
30686261		775	Potassium transporter 3 [Arabidopsis tha	0.985	0.987	0.659	0.0
297799628		775	hypothetical protein ARALYDRAFT_914233 [	0.985	0.987	0.656	0.0
4454033		802	putative potassium transport protein [Ar	0.997	0.965	0.641	0.0
186701236		777	tiny root hair 1 protein [Capsella rubel	0.993	0.992	0.649	0.0
356527658		791	PREDICTED: potassium transporter 3-like	0.996	0.977	0.651	0.0
356513321		790	PREDICTED: potassium transporter 3-like	0.987	0.969	0.657	0.0
115442081		783	Os01g0935500 [Oryza sativa Japonica Grou	0.988	0.979	0.588	0.0

>gi\|224075034\|ref\|XP_002304528.1\| predicted protein [Populus trichocarpa] gi\|222841960\|gb\|EEE79507.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score = 1092 bits (2823), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 536/774 (69%), Positives = 635/774 (82%), Gaps = 1/774 (0%)

Query: 4   ETKSPRQEFLLLAYQSFGIVFSDLSISPLYVYKSTFSGSLRHYQNEDAVFGAFSVIFWTL 63
           E K+ R+  LLLAYQSFGIVFSDLSI PLYVYK TFSG LRHYQNED VFGAFS++FWTL
Sbjct: 3   ECKNQRKHVLLLAYQSFGIVFSDLSIPPLYVYKCTFSGRLRHYQNEDTVFGAFSLVFWTL 62

Query: 64  TLLSLFKYVIIVLNADDNGEGGTFSLYALLCRHAKVGLLPNHQAADEELTTYHDPGYSSR 123
           TL SLFKYV  +L A+DNGEGG F+LY+++CRHAK  LLPN QAADEE++TYH  GYS+R
Sbjct: 63  TLFSLFKYVGFMLCANDNGEGGIFALYSVICRHAKFCLLPNQQAADEEISTYHSVGYSNR 122

Query: 124 NMTSSPFKVFMERHKKTKTGLLLLVLLGAALVFSIGVLTPAISVLSSIDGLQVQLQNRHT 183
           N+ SS FK F+E HKK KT LL+LVL GAA+  +I + TPAIS+LSS++GLQV+ +N H 
Sbjct: 123 NVVSSRFKKFVEGHKKMKTALLVLVLFGAAVFITIAIFTPAISILSSVEGLQVRAKNLHH 182

Query: 184 RMVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALS 243
            M+V +A  +LIG FVLQ+ G HRVAF+FAP+VILWLLS   +GIYN+IKWNPRVYQALS
Sbjct: 183 GMLVIIALFLLIGLFVLQHYGMHRVAFIFAPIVILWLLSIAFVGIYNIIKWNPRVYQALS 242

Query: 244 PYYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQY 303
           PYYIYKFF  TG+DGW SL G+ LC TG+E +FA LG FTA SI++AF  +V+PCLVLQY
Sbjct: 243 PYYIYKFFGETGKDGWISLGGILLCITGTEVIFAGLGHFTASSIRVAFSFVVYPCLVLQY 302

Query: 304 MGQAAFLSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALG 363
           MGQAAFLS+NFS+   SFH+SIPD L WPV V+ATLAAIVASQ+V+SATFS  KQC+ALG
Sbjct: 303 MGQAAFLSQNFSSVSTSFHSSIPDSLFWPVTVMATLAAIVASQAVVSATFSIAKQCHALG 362

Query: 364 CFPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVST 423
           CFPR+K+VHK++WV  Q Y+PEINW LMIL LAVTVG +DT  L NAYG AC+   FV+T
Sbjct: 363 CFPRIKIVHKSKWVHRQTYVPEINWALMILCLAVTVGSQDTIHLGNAYGIACITGIFVTT 422

Query: 424 LLTSLVIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYV 483
            LTS++I FVW+++L +ALLY  FFG IEII++SS+CM+IP GGWV L+ + VF+++MYV
Sbjct: 423 CLTSMIIDFVWHKNLLVALLYFSFFGIIEIIFVSSSCMRIPKGGWVPLVLSAVFMSVMYV 482

Query: 484 WHYGSRKRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLP 543
           WHYGSRK+YLYDLHNK  MKWIL  GS LGIVR+PGIGL++TELA+GVP  F+ F+T+LP
Sbjct: 483 WHYGSRKKYLYDLHNKASMKWILTLGSDLGIVRIPGIGLVYTELASGVPAMFSQFITDLP 542

Query: 544 AFYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCIVRNGYKDVPNSGD-DFEND 602
            FYQVVVFICVKTVP+PYV  KERYLIGRIGPK Y+MYRCIVR GYKDV  + D DFEN 
Sbjct: 543 TFYQVVVFICVKTVPIPYVSQKERYLIGRIGPKPYKMYRCIVRYGYKDVHENDDYDFENA 602

Query: 603 IVMSIAEFIQMEAEGFTNLDAPVDGWLAVVRTSEKFGKRLARSESDSKEESCSSSFPITG 662
           IVMS+AEFIQ+EAEG   LD  VDG LAVVR+SE FGKR   SESD  +ES S S+P +G
Sbjct: 603 IVMSVAEFIQLEAEGGGTLDGSVDGRLAVVRSSENFGKRFMMSESDGNKESSSWSYPASG 662

Query: 663 SCSKSPALQKLQSMYEQESPDLNYRPRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSYI 722
           S S+S ALQKL+SMYE ESP+   R R+Q KL DT +KD RVKEE+L+LLEAK AGV+Y+
Sbjct: 663 SSSRSAALQKLKSMYELESPEFCNRRRIQLKLLDTTYKDSRVKEEILELLEAKDAGVAYV 722

Query: 723 IGHSRIKAKWNAPFLKRFVINVAYSFLRKNSRSPAVFLNIPHICLIEVGINYYL 776
           IGHS IKAKWNA F KR +INV  SFLRKN RSP+V LNIPHI LIEVG+NYYL
Sbjct: 723 IGHSHIKAKWNATFWKRLLINVFLSFLRKNCRSPSVGLNIPHISLIEVGMNYYL 776

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|14149030\|emb\|CAC39168.1\| putative high-affinity potassium uptake transporter [Populus tremula x Populus tremuloides]	Back alignment and taxonomy information

>gi\|255537637\|ref\|XP_002509885.1\| Potassium transporter, putative [Ricinus communis] gi\|223549784\|gb\|EEF51272.1\| Potassium transporter, putative [Ricinus communis]	Back alignment and taxonomy information

>gi|30686261|ref|NP_194095.2| Potassium transporter 3 [Arabidopsis thaliana] gi|38503180|sp|Q9FE38.1|POT3_ARATH RecName: Full=Potassium transporter 3; Short=AtKT3; Short=AtKUP4; Short=AtPOT3; AltName: Full=Tiny root hair 1 protein gi|11181958|emb|CAC16137.1| tiny root hair 1 protein [Arabidopsis thaliana] gi|11181960|emb|CAC16138.1| tiny root hair 1 protein [Arabidopsis thaliana] gi|110741516|dbj|BAE98708.1| potassium transport like protein [Arabidopsis thaliana] gi|332659388|gb|AEE84788.1| Potassium transporter 3 [Arabidopsis thaliana]

Back alignment and taxonomy information

>gi\|297799628\|ref\|XP_002867698.1\| hypothetical protein ARALYDRAFT_914233 [Arabidopsis lyrata subsp. lyrata] gi\|297313534\|gb\|EFH43957.1\| hypothetical protein ARALYDRAFT_914233 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|4454033\|emb\|CAA23030.1\| putative potassium transport protein [Arabidopsis thaliana] gi\|7269212\|emb\|CAB79319.1\| putative potassium transport protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|186701236\|gb\|ACC91262.1\| tiny root hair 1 protein [Capsella rubella]	Back alignment and taxonomy information

>gi\|356527658\|ref\|XP_003532425.1\| PREDICTED: potassium transporter 3-like [Glycine max]	Back alignment and taxonomy information

>gi\|356513321\|ref\|XP_003525362.1\| PREDICTED: potassium transporter 3-like [Glycine max]	Back alignment and taxonomy information

>gi|115442081|ref|NP_001045320.1| Os01g0935500 [Oryza sativa Japonica Group] gi|75164097|sp|Q942X8.1|HAK2_ORYSJ RecName: Full=Probable potassium transporter 2; AltName: Full=OsHAK2 gi|15408801|dbj|BAB64197.1| putative HAK2 [Oryza sativa Japonica Group] gi|113534851|dbj|BAF07234.1| Os01g0935500 [Oryza sativa Japonica Group] gi|222619827|gb|EEE55959.1| hypothetical protein OsJ_04680 [Oryza sativa Japonica Group]

Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		776
TAIR\|locus:2128399		775	TRH1 "TINY ROOT HAIR 1" [Arabi	0.984	0.985	0.621	4e-264
TAIR\|locus:2078688		789	KUP3 "AT3G02050" [Arabidopsis	0.978	0.961	0.542	1.3e-224
TAIR\|locus:2045639		712	KT1 "potassium transporter 1"	0.774	0.844	0.496	1e-189
TAIR\|locus:2016139		782	KUP6 "K+ uptake permease 6" [A	0.966	0.959	0.461	1.7e-187
TAIR\|locus:2185515		781	KUP8 "potassium uptake 8" [Ara	0.966	0.960	0.461	1.3e-185
TAIR\|locus:2061838		794	KT2 "potassium transporter 2"	0.983	0.960	0.441	4.2e-182
TAIR\|locus:2029589		796	KUP10 "K+ uptake permease 10"	0.773	0.753	0.455	1.3e-156
TAIR\|locus:2044717		793	KUP11 "K+ uptake permease 11"	0.787	0.770	0.444	1.7e-154
TAIR\|locus:2195688		827	AT1G60160 [Arabidopsis thalian	0.771	0.724	0.421	5.8e-150
TAIR\|locus:2119812		823	KUP9 "AT4G19960" [Arabidopsis	0.770	0.726	0.428	1.6e-145

TAIR\|locus:2128399 TRH1 "TINY ROOT HAIR 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2541 (899.5 bits), Expect = 4.0e-264, P = 4.0e-264
 Identities = 477/768 (62%), Positives = 586/768 (76%)

Query:    11 EFLLLAYQSFGIVFSDLSISPLYVYKSTFSGSLRHYQNEDAVFGAFSVIFWTLTLLSLFK 70
             + LLLAYQSFG+VF DLSISPLYVYK TF G LRH+Q ED +FGAFS+IFWT+TLLSL K
Sbjct:    10 QILLLAYQSFGLVFGDLSISPLYVYKCTFYGGLRHHQTEDTIFGAFSLIFWTITLLSLIK 69

Query:    71 YVIIVLNADDNGEGGTFSLYALLCRHAKVGLLPNHQAADEELTTYHDPGYSSRNMTSSPF 130
             Y++ VL+ADDNGEGG F+LYALLCRHA+  LLPN QAADEE++TY+ PG +SRN+ SS F
Sbjct:    70 YMVFVLSADDNGEGGIFALYALLCRHARFSLLPNQQAADEEISTYYGPGDASRNLPSSAF 129

Query:   131 KVFMERHKKTKTXXXXXXXXXXXXXFSIGVLTPAISVLSSIDGLQVQLQNRHTRMVVFLA 190
             K  +ER+K++KT              +IGVLTPAISV SSIDGL  +   +H+  VV +A
Sbjct:   130 KSLIERNKRSKTALLVLVLVGTSMVITIGVLTPAISVSSSIDGLVAKTSLKHST-VVMIA 188

Query:   191 CLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKF 250
             C +L+G FVLQ+RGT++VAF+FAP++ILWLL     G+YN++ WNP VY+ALSPYYIY F
Sbjct:   189 CALLVGLFVLQHRGTNKVAFLFAPIMILWLLIIATAGVYNIVTWNPSVYKALSPYYIYVF 248

Query:   251 FKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFL 310
             F+ TG DGW SL G+ LC TG+EA+FA+LGQFTA SI+ AFCC+V+PCLVLQYMGQAAFL
Sbjct:   249 FRDTGIDGWLSLGGILLCITGTEAIFAELGQFTATSIRFAFCCVVYPCLVLQYMGQAAFL 308

Query:   311 SKNFSAAPLSFHASIPDPLRWPXXXXXXXXXXXXXXXXXXXTFSTVKQCYALGCFPRVKV 370
             SKNFSA P SF++SIPDP  WP                   TFS VKQCYALGCFPRVK+
Sbjct:   309 SKNFSALPSSFYSSIPDPFFWPVLMMAMLAAMVASQAVIFATFSIVKQCYALGCFPRVKI 368

Query:   371 VHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMAXXXXXXXXXXXXI 430
             VHK RWV GQ+YIPEINWV+MIL+LAVT+ FRDT  +A A+G ACM             I
Sbjct:   369 VHKPRWVLGQIYIPEINWVVMILTLAVTICFRDTRHIAFAFGLACMTLAFVTTWLMPLII 428

Query:   431 YFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSRK 490
              FVWN+++  ++L++LFFG+IE+I+++SA +KIP GGW+ L+ +  F  I YVWHYGSRK
Sbjct:   429 NFVWNRNIVFSVLFILFFGTIELIFVASALVKIPKGGWITLLLSLFFTFITYVWHYGSRK 488

Query:   491 RYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPAFYQVVV 550
             +YL D HNKVPMK IL+ G SLGI++VPG+GL++TELA+GVP TF HFLTNLPAFYQVVV
Sbjct:   489 KYLCDQHNKVPMKSILSLGPSLGIIKVPGMGLIYTELASGVPATFKHFLTNLPAFYQVVV 548

Query:   551 FICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCIVRNGYKDVPNSGDDFENDIVMSIAEF 610
             F+C KTVP+PYV  KERYLIGRIGPK+YRMYRCI+R GYKDV   GDDFE+++VMSIAEF
Sbjct:   549 FVCCKTVPIPYVPQKERYLIGRIGPKTYRMYRCIIRAGYKDVNKDGDDFEDELVMSIAEF 608

Query:   611 IQMEAEGF--TNLDAPVDGWLAVVRTSEKFGKRLARXXXXXXXXXXXXXFPITGSCSKSP 668
             IQ+E+EG+  +N D  +DG LAVV+ S KFG RL+R                T + SKSP
Sbjct:   609 IQLESEGYGGSNTDRSIDGRLAVVKASNKFGTRLSRSISEANIAGSSRS-QTTVTNSKSP 667

Query:   669 ALQKLQSMYEQESPDLNYRPRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSYIIGHSRI 728
             AL KL++ YEQE P L+ R   QF+  DTKF+  +VKEEL  L+ AK A V+YI+GH  +
Sbjct:   668 ALLKLRAEYEQELPRLSMRRMFQFRPMDTKFRQPQVKEELFDLVNAKDAEVAYIVGHGHV 727

Query:   729 KAKWNAPFLKRFVINVAYSFLRKNSRSPAVFLNIPHICLIEVGINYYL 776
             KAK N+ F+K+ V+NVAYSFLRKN RSP V LNIPHICLI+VG+NYYL
Sbjct:   728 KAKRNSVFVKQLVVNVAYSFLRKNCRSPGVMLNIPHICLIKVGMNYYL 775

GO:0015079 "potassium ion transmembrane transporter activity" evidence=IEA;IGI;ISS

GO:0016020 "membrane" evidence=IEA;IDA;NAS

GO:0071805 "potassium ion transmembrane transport" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IC

GO:0009826 "unidimensional cell growth" evidence=IMP

GO:0009932 "cell tip growth" evidence=IMP

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0006007 "glucose catabolic process" evidence=RCA

GO:0006486 "protein glycosylation" evidence=RCA

TAIR\|locus:2078688 KUP3 "AT3G02050" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2045639 KT1 "potassium transporter 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2016139 KUP6 "K+ uptake permease 6" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2185515 KUP8 "potassium uptake 8" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2061838 KT2 "potassium transporter 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2029589 KUP10 "K+ uptake permease 10" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2044717 KUP11 "K+ uptake permease 11" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2195688 AT1G60160 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2119812 KUP9 "AT4G19960" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9FE38	POT3_ARATH	No assigned EC number	0.6592	0.9858	0.9870	yes	no
Q942X8	HAK2_ORYSJ	No assigned EC number	0.5889	0.9884	0.9795	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	fgenesh4_pg.C_LG_III001115	hypothetical protein (776 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		776
PLN00148		785	PLN00148, PLN00148, potassium transporter; Provisi	0.0
PLN00149		779	PLN00149, PLN00149, potassium transporter; Provisi	0.0
PLN00150		779	PLN00150, PLN00150, potassium ion transporter fami	0.0
PLN00151		852	PLN00151, PLN00151, potassium transporter; Provisi	0.0
TIGR00794		688	TIGR00794, kup, potassium uptake protein	0.0
pfam02705		534	pfam02705, K_trans, K+ potassium transporter	0.0
COG3158		627	COG3158, Kup, K+ transporter [Inorganic ion transp	1e-138
PRK10745		622	PRK10745, trkD, potassium transport protein Kup; P	5e-99
TIGR00794		688	TIGR00794, kup, potassium uptake protein	6e-11
COG0531		466	COG0531, PotE, Amino acid transporters [Amino acid	1e-05

>gnl\|CDD\|215077 PLN00148, PLN00148, potassium transporter; Provisional	Back alignment and domain information

 Score = 1102 bits (2853), Expect = 0.0
 Identities = 469/768 (61%), Positives = 592/768 (77%), Gaps = 11/768 (1%)

Query: 13  LLLAYQSFGIVFSDLSISPLYVYKSTFSGSLRHYQNEDAVFGAFSVIFWTLTLLSLFKYV 72
           LLLAYQSFG+V+ DLS SPLYVYKSTFSG L+ +QNE+ +FGAFS+IFWT TL+ L KYV
Sbjct: 25  LLLAYQSFGVVYGDLSTSPLYVYKSTFSGKLQKHQNEETIFGAFSLIFWTFTLIPLLKYV 84

Query: 73  IIVLNADDNGEGGTFSLYALLCRHAKVGLLPNHQAADEELTTYHDPGYSSRNMTSSPFKV 132
            I+L+ADDNGEGGTF+LY+LLCRHAK+ LLPN QAADEEL+ Y     S++ + SSP K 
Sbjct: 85  TILLSADDNGEGGTFALYSLLCRHAKLSLLPNQQAADEELSAYKYGP-STQTVGSSPLKR 143

Query: 133 FMERHKKTKTGLLLLVLLGAALVFSIGVLTPAISVLSSIDGLQVQLQNRHTRMVVFLACL 192
           F+E+HK+ +T LLL+VL GA +V   GVLTPAISVLSS+ GLQV         +V LAC+
Sbjct: 144 FLEKHKRLRTALLLVVLFGACMVIGDGVLTPAISVLSSVSGLQVTETKLTDGELVLLACV 203

Query: 193 VLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFK 252
           +L+G F LQ+ GTHRVAFMFAP+VI+WLLS   IG+YN+I WNP++  ALSPYYI KFF+
Sbjct: 204 ILVGLFALQHCGTHRVAFMFAPIVIIWLLSIGSIGLYNIIHWNPKIIHALSPYYIIKFFR 263

Query: 253 YTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLSK 312
            TG+DGW SL G+ L  TG+EAMFADLG FTA SI+LAF  +++PCLV+QYMGQAAFLSK
Sbjct: 264 VTGKDGWISLGGILLSITGTEAMFADLGHFTAASIRLAFATVIYPCLVVQYMGQAAFLSK 323

Query: 313 NFSAAPLSFHASIPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFPRVKVVH 372
           N  + P SF+ SIPDP+ WPV V+ATLAAIV SQ+VI+ATFS VKQC+ALGCFPRVKVVH
Sbjct: 324 NIPSIPNSFYDSIPDPVFWPVFVIATLAAIVGSQAVITATFSIVKQCHALGCFPRVKVVH 383

Query: 373 KARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTLLTSLVIYF 432
            ++ + GQ+YIPEINW+LMIL+LAVT+GFRDT  + NAYG ACM + F++T L +LVI F
Sbjct: 384 TSKHIYGQIYIPEINWILMILTLAVTIGFRDTTLIGNAYGLACMTVMFITTFLMALVIIF 443

Query: 433 VWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRY 492
           VW +S+ LA L++LFFG IE +YLS+A MK+P GGWV L+ + +F++IMY+WHYG+RK+Y
Sbjct: 444 VWQKSIILAALFLLFFGFIEGVYLSAALMKVPQGGWVPLVLSAIFMSIMYIWHYGTRKKY 503

Query: 493 LYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPAFYQVVVFI 552
            +DLHNKV +KW+L  G SLGIVRVPGIGL+++ELA GVP  F+HF+TNLPAF++V+VF+
Sbjct: 504 NFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFV 563

Query: 553 CVKTVPLPYVHHKERYLIGRIGPKSYRMYRCIVRNGYKDVPNSGDDFENDIVMSIAEFIQ 612
           CVK+VP+PYV  +ER+LIGR+ P+ YRMYRCIVR GYKD+     DFEN +V SIAEFIQ
Sbjct: 564 CVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDIQRDDGDFENMLVQSIAEFIQ 623

Query: 613 MEAE---GFTNLDAPVDGWLAVVRTSEKFGKRLA-RSESDSKEESCSSSFPITGSCSKSP 668
           MEAE      +  +  DG +AV+ T +     L   SE +        S       SKS 
Sbjct: 624 MEAEEPQSSASESSSNDGRMAVISTRDVQSSSLLMVSEQE--LADIDDSI----QSSKSL 677

Query: 669 ALQKLQSMYEQESPDLNYRPRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSYIIGHSRI 728
            LQ LQS YE E+P  + R RV+F+L +    D  V+EEL+ L+EAK AGV+YI+GHS +
Sbjct: 678 TLQSLQSAYEDENPGQSRRRRVRFQLPENPGMDPSVREELMDLIEAKEAGVAYIMGHSYV 737

Query: 729 KAKWNAPFLKRFVINVAYSFLRKNSRSPAVFLNIPHICLIEVGINYYL 776
           KA+ ++ FLK+  I++ YSFLRKN R PAV LNIPHI LIEVG+ YY+
Sbjct: 738 KARRSSSFLKKLAIDIGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV 785

Length = 785

>gnl\|CDD\|177753 PLN00149, PLN00149, potassium transporter; Provisional	Back alignment and domain information

>gnl\|CDD\|215078 PLN00150, PLN00150, potassium ion transporter family protein; Provisional	Back alignment and domain information

>gnl\|CDD\|215079 PLN00151, PLN00151, potassium transporter; Provisional	Back alignment and domain information

>gnl\|CDD\|129876 TIGR00794, kup, potassium uptake protein	Back alignment and domain information

>gnl\|CDD\|217193 pfam02705, K_trans, K+ potassium transporter	Back alignment and domain information

>gnl\|CDD\|225700 COG3158, Kup, K+ transporter [Inorganic ion transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|182693 PRK10745, trkD, potassium transport protein Kup; Provisional	Back alignment and domain information

>gnl\|CDD\|129876 TIGR00794, kup, potassium uptake protein	Back alignment and domain information

>gnl\|CDD\|223605 COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		776
PLN00148		785	potassium transporter; Provisional	100.0
PLN00149		779	potassium transporter; Provisional	100.0
PLN00151		852	potassium transporter; Provisional	100.0
PLN00150		779	potassium ion transporter family protein; Provisio	100.0
TIGR00794		688	kup potassium uptake protein. Proteins of the KUP	100.0
PRK10745		622	trkD potassium transport protein Kup; Provisional	100.0
PF02705		534	K_trans: K+ potassium transporter; InterPro: IPR00	100.0
COG3158		627	Kup K+ transporter [Inorganic ion transport and me	100.0
TIGR00911		501	2A0308 L-type amino acid transporter.	91.37
COG0531		466	PotE Amino acid transporters [Amino acid transport	82.9
TIGR03813		474	put_Glu_GABA_T putative glutamate/gamma-aminobutyr	81.38
TIGR00909		429	2A0306 amino acid transporter.	81.03

>PLN00148 potassium transporter; Provisional	Back alignment and domain information

Probab=100.00  E-value=8.3e-258  Score=2181.17  Aligned_cols=763  Identities=61%  Similarity=1.059  Sum_probs=693.6

Q ss_pred             chhh---hHHHHHhhcceeecccCcchHHHHHHhcCCCCCCCCCcCceehhhHHHHHHHHHHhhhheeeEEEEecCCCCC
Q 004065            8 PRQE---FLLLAYQSFGIVFSDLSISPLYVYKSTFSGSLRHYQNEDAVFGAFSVIFWTLTLLSLFKYVIIVLNADDNGEG   84 (776)
Q Consensus         8 ~~~~---~~~La~~slGVVyGDIGTSPLYv~~~~f~~~~~~~~~~~~vlGvlSLIfWtLtliv~iKYv~ivl~Adn~GEG   84 (776)
                      .|+.   ++.|||||+|||||||||||||||+++|+++++..+++|||+|+|||||||||||+++|||+|||||||||||
T Consensus        17 ~w~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~F~~~~~~~~~~~~ilGvLSLIfWtLtLiv~iKYV~ivlrAdn~GEG   96 (785)
T PLN00148         17 SWVNLSRNLLLAYQSFGVVYGDLSTSPLYVYKSTFSGKLQKHQNEETIFGAFSLIFWTFTLIPLLKYVTILLSADDNGEG   96 (785)
T ss_pred             hhhHHhHHHHHHHhcccEEeCcccccHHHHHHHHhcCCCCCCCCHHHHHhHHHHHHHHHHHHHHHhheEEEEEecCCCCc
Confidence            4555   7899999999999999999999999999876666799999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHhhhcccCCCCCCCccccccccccCCCCCCCCCCCchhhHhhhhccchhhHHHHHHHHhhhhhhcCccccch
Q 004065           85 GTFSLYALLCRHAKVGLLPNHQAADEELTTYHDPGYSSRNMTSSPFKVFMERHKKTKTGLLLLVLLGAALVFSIGVLTPA  164 (776)
Q Consensus        85 G~fALysLl~r~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~l~~l~l~G~~m~~gDGvlTPA  164 (776)
                      ||||||||+|||+|++++||||++|+++++|++..++.+ +++.++|++||+|+++|.+++++|++|+||+|||||||||
T Consensus        97 G~fALysLl~r~~~~~~~pn~~~~d~~ls~~~~~~~~~~-~~~~~~k~~lE~~~~~~~~ll~l~l~G~am~~gDgvlTPA  175 (785)
T PLN00148         97 GTFALYSLLCRHAKLSLLPNQQAADEELSAYKYGPSTQT-VGSSPLKRFLEKHKRLRTALLLVVLFGACMVIGDGVLTPA  175 (785)
T ss_pred             hHHHHHHHHHHhcccccCccchhhhhhhhhhccCccccc-hhhhHHHHHhhhchHHHHHHHHHHHHHHHHHHhccccchh
Confidence            999999999999999999999999999999988654443 4567799999999999999999999999999999999999


Q ss_pred             hhhhhhhccceecccCCCcceEehhHHHHHHHHHhhcccccchhhhhhhhHHHHHHHHHhhhhhhhccccCcceeeecCh
Q 004065          165 ISVLSSIDGLQVQLQNRHTRMVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSP  244 (776)
Q Consensus       165 ISVLSAveGl~v~~p~~~~~~Vv~is~~ILv~LF~~Q~~GT~kvg~~F~PIm~vWf~~i~~~GiynI~~~~p~Vl~AlnP  244 (776)
                      |||||||||||++.|++++++||||||+||++||++||+||+|||++|||||++||++|+++|+|||++|||+||+||||
T Consensus       176 ISVLSAVeGl~v~~p~~~~~~vv~is~~ILv~LF~vQ~~GT~kVg~~FgPIm~lWf~~i~~iGiyni~~~~p~Vl~AlnP  255 (785)
T PLN00148        176 ISVLSSVSGLQVTETKLTDGELVLLACVILVGLFALQHCGTHRVAFMFAPIVIIWLLSIGSIGLYNIIHWNPKIIHALSP  255 (785)
T ss_pred             HHHHHHhccceecCCCCCCCeehhHHHHHHHHHHHHhccccHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCHHHhhhcCH
Confidence            99999999999999999889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCcceeeecchhhhhccchhhhhhcCCCCCccceeeehhhhhhhHHHHhcccccchhccCCCccCCccccc
Q 004065          245 YYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLSKNFSAAPLSFHAS  324 (776)
Q Consensus       245 ~ya~~ff~~~~~~g~~~LG~V~L~iTG~EALyADlGHFg~~~Ir~aw~~~V~P~L~L~Y~GQaA~ll~~p~~~~npFy~~  324 (776)
                      +|+++||++||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+||||||++||++.+||||++
T Consensus       256 ~y~~~ff~~~~~~g~~~LGgV~L~iTGaEALyADlGHFg~~~Iriaw~~~V~P~L~L~Y~GQaA~ll~~p~~~~npFf~~  335 (785)
T PLN00148        256 YYIIKFFRVTGKDGWISLGGILLSITGTEAMFADLGHFTAASIRLAFATVIYPCLVVQYMGQAAFLSKNIPSIPNSFYDS  335 (785)
T ss_pred             HHHHHHHHhCCCceEEeecchheeccchhhhhhhccCCCccceEEeeeehHHHHHHHHHcchHHHHhcCcccccCcHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCchhHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHcCCCCcceEEecCCcccCeeeechhhHHHHHHhheeeEEecCc
Q 004065          325 IPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDT  404 (776)
Q Consensus       325 iP~~~~~P~~vlAtlAtIIASQA~Isg~FSii~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~~l~vv~~F~~s  404 (776)
                      +|+|++||+|++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||
T Consensus       336 iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrvkIvhTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~s  415 (785)
T PLN00148        336 IPDPVFWPVFVIATLAAIVGSQAVITATFSIVKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMILTLAVTIGFRDT  415 (785)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHHHHHHHHHHHHhheeeccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHhhhhchhhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhhccccCCchHHHHHHHHHHHHHHHH
Q 004065          405 NRLANAYGSACMALTFVSTLLTSLVIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVW  484 (776)
Q Consensus       405 ~~l~~AYGiaV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~F~~ie~~f~sa~l~Ki~~GGW~pl~ia~~~~~iM~~W  484 (776)
                      ++||||||+||++||++||+|+++||+.+||||++++++|+++|+++|++|||||+.||+||||+||++|++++++|++|
T Consensus       416 ~~la~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~W  495 (785)
T PLN00148        416 TLIGNAYGLACMTVMFITTFLMALVIIFVWQKSIILAALFLLFFGFIEGVYLSAALMKVPQGGWVPLVLSAIFMSIMYIW  495 (785)
T ss_pred             hhHHHhhhhheeeHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhHHHHHhhhhcCCCChHHHHHhccCCCCCccCCcEEEEeCCCCCcchhhhhhhhcccccceEEEEEEEEEecccccCC
Q 004065          485 HYGSRKRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPAFYQVVVFICVKTVPLPYVHH  564 (776)
Q Consensus       485 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~v~~~~~lhe~~vfv~i~~~~vP~V~~  564 (776)
                      |||++++|+++.+|++|++++.++.++.++.||||+|+|||++.+|+|++|.||++|||++||++||||||++|+|+||+
T Consensus       496 ~~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~RVpG~~vf~t~~~~gvP~~f~h~~~~~~~lHe~~Vfv~ik~~~vP~V~~  575 (785)
T PLN00148        496 HYGTRKKYNFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSP  575 (785)
T ss_pred             HHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccCh
Confidence            99999999999999999999999988888999999999999999999999999999999999999999999999999999


Q ss_pred             CceEEEEeecCCCccEEEEEEEeeecccCCCchhhHHHHHHHHHHHHHhhhccCC-C-C-CCCCCCcceeeecccccccc
Q 004065          565 KERYLIGRIGPKSYRMYRCIVRNGYKDVPNSGDDFENDIVMSIAEFIQMEAEGFT-N-L-DAPVDGWLAVVRTSEKFGKR  641 (776)
Q Consensus       565 ~eR~~v~~i~~~~~~~~r~~~ryGy~d~~~~~~~F~~~lv~~L~~FIr~e~~~~~-~-~-~~~~~~~~~~~~~~~~~~~~  641 (776)
                      +|||+++|+++++||+|||++||||||.+++++|||++|+++|++|||+|+.+.+ + + .++++++++++++++..+..
T Consensus       576 ~eR~~v~~i~~~~yr~~r~vvryGy~d~~~~~~dFe~~Lv~~L~~FIr~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  655 (785)
T PLN00148        576 EERFLIGRVCPRPYRMYRCIVRYGYKDIQRDDGDFENMLVQSIAEFIQMEAEEPQSSASESSSNDGRMAVISTRDVQSSS  655 (785)
T ss_pred             hheEEEEEecCCCceEEEEEEEEccCcccccchHHHHHHHHHHHHHHHhhhhcccccccccccccccccccccccccccc
Confidence            9999999999999999999999999999988999999999999999999985421 0 1 11113445555433211111


Q ss_pred             cccccCCcccccCCCCCCccCCCCCCchhhhhhcccccCCCCCCCCccccccccCccccchhHHHHHHHHHHHHhCCcEE
Q 004065          642 LARSESDSKEESCSSSFPITGSCSKSPALQKLQSMYEQESPDLNYRPRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSY  721 (776)
Q Consensus       642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~eEL~~L~~A~eaGVvY  721 (776)
                      ....+++   +..+.++.. .+ +++.+.++.++.++.++++..++++++|..+++.+.+++++||+++|++|||+||+|
T Consensus       656 ~~~~~~~---~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~~L~~A~eaGVvY  730 (785)
T PLN00148        656 LLMVSEQ---ELADIDDSI-QS-SKSLTLQSLQSAYEDENPGQSRRRRVRFQLPENPGMDPSVREELMDLIEAKEAGVAY  730 (785)
T ss_pred             ccccccc---ccccccccc-cc-ccccccccccccccccccccccccceeecccccccccchHHHHHHHHHHHHHcCcEE
Confidence            0000000   000000000 00 011111223333344444445567888876655555688999999999999999999


Q ss_pred             EEeeeEEEecCCCchhHHHHHHHHHHHHHhhcCCCCcccccCCCCEEEeeeEEEC
Q 004065          722 IIGHSRIKAKWNAPFLKRFVINVAYSFLRKNSRSPAVFLNIPHICLIEVGINYYL  776 (776)
Q Consensus       722 IlG~s~vkAk~~Ss~lKK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGmvY~v  776 (776)
                      |+||++||||++|+|+||++||++|+|||||||+|.++|+|||++||||||+|||
T Consensus       731 IlG~s~v~Ar~~Ss~~KKivIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGM~Y~V  785 (785)
T PLN00148        731 IMGHSYVKARRSSSFLKKLAIDIGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV  785 (785)
T ss_pred             EeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEcceEEEC
Confidence            9999999999999999999999999999999999999999999999999999997

>PLN00149 potassium transporter; Provisional	Back alignment and domain information

>PLN00151 potassium transporter; Provisional	Back alignment and domain information

>PLN00150 potassium ion transporter family protein; Provisional	Back alignment and domain information

>TIGR00794 kup potassium uptake protein	Back alignment and domain information

>PRK10745 trkD potassium transport protein Kup; Provisional	Back alignment and domain information

>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members	Back alignment and domain information

>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism]	Back alignment and domain information

>TIGR00911 2A0308 L-type amino acid transporter	Back alignment and domain information

>COG0531 PotE Amino acid transporters [Amino acid transport and metabolism]	Back alignment and domain information

>TIGR03813 put_Glu_GABA_T putative glutamate/gamma-aminobutyrate antiporter	Back alignment and domain information

>TIGR00909 2A0306 amino acid transporter	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		776
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04
3lvg_D		190	LCB, clathrin light chain B; SELF assembly, coated	3e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 44.5 bits (104), Expect = 1e-04
 Identities = 71/500 (14%), Positives = 132/500 (26%), Gaps = 141/500 (28%)

Query: 325 IPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFPRVKVVHKARWVRGQVYIP 384
           + D  +  +L    +  I+ S+  +S T                +     ++V  +V   
Sbjct: 38  VQDMPK-SILSKEEIDHIIMSKDAVSGTL------RLFWTLLSKQEEMVQKFV-EEVLRI 89

Query: 385 EINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTLLTSLVIYFVWNQSLFLALLY 444
              +    L   +    R  + +   Y      L   + +      Y V     +L L  
Sbjct: 90  NYKF----LMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAK---YNVSRLQPYLKLRQ 142

Query: 445 VLFFGSIEIIYLSSACMKIPNGGWVAL--MFTTVFLAIMYVWHYGSRKRYL-------YD 495
            L              +++     V +  +              GS K ++       Y 
Sbjct: 143 AL--------------LELRPAKNVLIDGVL-------------GSGKTWVALDVCLSYK 175

Query: 496 LHNKVPMK--WILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPAFYQVVVFIC 553
           +  K+  K  W+     +L     P      T L           L  L   YQ+     
Sbjct: 176 VQCKMDFKIFWL-----NLKNCNSPE-----TVLEM---------LQKL--LYQIDPNWT 214

Query: 554 V-----KTVPLPYVHHKE--RYLIGRIGPKSYRMYRC--IVRNGYKDVPNSG--DDFEND 602
                   + L     +   R L+     K Y    C  ++     +V N+   + F   
Sbjct: 215 SRSDHSSNIKLRIHSIQAELRRLLKS---KPYE--NCLLVLL----NVQNAKAWNAFNLS 265

Query: 603 --IVM-----SIAEFIQMEAEGFTNLDAPVDGWLAVVRTSEKFGKRLARSESDSKEESCS 655
             I++      + +F+        +LD      L          K L     D   E  +
Sbjct: 266 CKILLTTRFKQVTDFLSAATTTHISLDHHSMT-LTPDEVKSLLLKYLDCRPQDLPREVLT 324

Query: 656 SSFP-----ITGSCSKSPA---------LQKLQSM----YEQESPDLNYRPR-VQFKLTD 696
           ++ P     I  S     A           KL ++         P   YR    +  +  
Sbjct: 325 TN-PRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAE-YRKMFDRLSV-- 380

Query: 697 TKF-KDLRVKEELLQLL--EAKCAGVSYIIGHSRIK---AKWNAPFLKRFVINVAY-SFL 749
             F     +   LL L+  +   + V  ++          K          I   Y    
Sbjct: 381 --FPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKES--TISIPSIYLELK 436

Query: 750 RKNSRSPAVFLNIPHICLIE 769
            K     A+     H  +++
Sbjct: 437 VKLENEYAL-----HRSIVD 451

PyMOL of 1vt4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		776
4djk_A		511	Probable glutamate/gamma-aminobutyrate antiporter;	96.5
3gia_A		444	Uncharacterized protein MJ0609; membrane protein,	96.43
3l1l_A		445	Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC	95.62

>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A	Back alignment and structure

Probab=96.50  E-value=0.06  Score=59.16  Aligned_cols=85  Identities=15%  Similarity=0.153  Sum_probs=49.0

Q ss_pred             EehhHHHHHHHHHhhcccccchhhhhhhhH----HHHHHHHHhhhhhhhccccCccee----eecChHHHHHHHHhcCcc
Q 004065          186 VVFLACLVLIGHFVLQYRGTHRVAFMFAPV----VILWLLSTTGIGIYNVIKWNPRVY----QALSPYYIYKFFKYTGRD  257 (776)
Q Consensus       186 Vv~is~~ILv~LF~~Q~~GT~kvg~~F~PI----m~vWf~~i~~~GiynI~~~~p~Vl----~AlnP~ya~~ff~~~~~~  257 (776)
                      ...+++++++++..+--+|....+++..-.    +++-++.+.++|++.+...+|.-+    ..+.|.+       .+..
T Consensus       130 ~~~~~~~~~~~~~~in~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~  202 (511)
T 4djk_A          130 KTIAALIILWALALTQFGGTKYTARIAKVGFFAGILLPAFILIALAAIYLHSGAPVAIEMDSKTFFPDF-------SKVG  202 (511)
T ss_dssp             HHHHHHHHHHHHHHHHHTCSSSHHHHTHHHHHHTTHHHHHHHHHHHHHHTC------------CCCCCT-------TSTT
T ss_pred             HHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCcccccCCCc-------ccch
Confidence            456778888888899999988777654332    222344555667666554333221    1222211       1234


Q ss_pred             eeeecchhhhhccchhhhhh
Q 004065          258 GWTSLAGLFLCTTGSEAMFA  277 (776)
Q Consensus       258 g~~~LG~V~L~iTG~EALyA  277 (776)
                      +|..+..++.+.+|-|+.-.
T Consensus       203 ~~~~~~~~~~a~~G~e~~~~  222 (511)
T 4djk_A          203 TLVVFVAFILSYMGVEASAT  222 (511)
T ss_dssp             TTTTHHHHHHHHTTGGGGTG
T ss_pred             HHHHHHHHHHHHhhHHHHHH
Confidence            56677888999999998644

PyMOL of 4djk

>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C	Back alignment and structure

>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00