Citrus Sinensis ID: 004076

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-----
MEEFKGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVEADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKEEKLELEQSQFLSSGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAASHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSEVRSQDAVYGLAVSIEGRETAWKWLKDNWDHISKTWGSGFLITRFISSIVSPFASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELAYRKY
ccccccccccccccccccEEEEEEEcccccEEEEEEEEEEEEEccccEEEEEccccEEEEEEEEEEcccccccccccEEEEEcccEEEEEEEccccccccEEEEEEEEEEEcccccEEEEEEEEEccEEEEEEEEcccccccccccccccccccccEEEEEEEEccccEEEcccccccEEEcccEEEEEEcccccccHHHHHHEEccccEEEEcccccEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEccccccccccccccHHHHccccccccccccHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHccccccccccEEEcccHHHHHHcccccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHccccccHHHHHHHHHHcccccHHHHHHHHHccccccEEEEEEEccEEEEEEccccccccccccEEEEcEEEEEcccccccccccccccccEEEccccccccccccccccEEEEccccEEEEEEEccHHHHHHHHHHHHcccHHHHHHHcccHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccHHHHHHHHHHHcccccHHHHHHHHHHHcccccccccEEHHHcccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccc
cccccccccccccEEEcEEEEEEEEcccccEEEEEEEEEEEEEccccEEEEEcccEEEcEEEEEEEccccccccccEEEEEccccEEEEEEcccccccccEEEEEEEEEEEcccccEEEEEEEcccccEEEEEEEccccHHHHHHcccccccccEEEEEEEEEEccccEEEccccccccccccccEEEEEcccccccEEEEEEEEEccccEccccccccEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEccccHccHHHcccEEEEEHHHHHcccccccHcccccccHHHHHHHHHccEcccEEEccHHHHHHHHHHHHHHHHHHHHHHHcHccHHHHHHHHHHHHHHHHHHHccccEEEEcccHHHHHHHHHHccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHccccHHHHHHHHHHHccccEEEEEEcccEEEEEEEEEcccccccccEEEEEEEEEEcccccccEEEEcccccEEEEcccccEEEEcccccccEEEEEccccEEEEEccccHHHHHHHHHHHcccHHHHHHccccHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHcccHHHHHHHHHHHHHcccHHHHHHHHHHHHccccHHHHHHHHHHHcccccccccEEEEEccccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHcccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcccccc
meefkgqprlpkfavpkrydirltpdltsckfggsvaidvdvvgdtKFIVLNAadltinnrsvSFTNkvsskaleptkvelVEADEILVLEFAEtlptgmgvlAIGFEGVLNDKMKGFYRSsyelngekknmavtqfepadarrcfpcwdepackatfkiTLDVPselvalsnmpvidekvdgnmktvsyqespimSTYLVAVVIGLFDYvedhtsdgiKVRVYCQVGKANQGKFALNVAVKTLELYKEYfavpyslpkldmiaipdfaAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEglrldglaeshpievevnhtgeidEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALeegsgepvnKLMNSwtkqkgypvisvKVKEEKLELeqsqflssgspgdgqwivpitlccgsydvcknfllynksdsfdikELLGcsiskegdnggwiklNVNQTGFYRVKYDKDLAASHLDALLRGEIFTALALLGHKETLNEASKRFHAFLadrttpllppdiRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSEVRSQDAVYGLAVSIEGRETAWKWLKDNWDHISKTWGSGFLITRFISSivspfasyEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELAYRKY
meefkgqprlpkfavpkrydirltpdltsckfGGSVAIDVDVVGDTKFIVLnaadltinnrsvsftnkvsskaleptkvELVEADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEvevnhtgeidEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKEEKLELEQSQflssgspgdgQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCsiskegdnggwIKLNVNQTGFYRVKYDKDLAASHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQkvsasdrsgyeSLLRVYRETDLSQEKTRILsslascpdVNIVLEVLNFLLSSEVRSQDAVYGLAVSIEGRETAWKWLKDNWDHISKTWGSGFLITRFISSIVSPFASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWVesirneghlaeavkelayrky
MEEFKGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVEADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVIsvkvkeekleleqsqflssGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAASHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSEVRSQDAVYGLAVSIEGRETAWKWLKDNWDHISKTWGSGFLITRFISSIVSPFASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELAYRKY
************FAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVEADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEE*****VNKLMNSWTKQKGYPVISVKV*******************DGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAASHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSEVRSQDAVYGLAVSIEGRETAWKWLKDNWDHISKTWGSGFLITRFISSIVSPFASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNEGHLAEAV********
****KGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTN******LEPTKVELVEADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKEEKLELEQSQFLSSGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAASHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSEVRSQDAVYGLAVSIEGRETAWKWLKDNWDHISKTWGSGFLITRFISSIVSPFASYEKVREVEEFFSSRCK*****TLRQSIERVQINAKWVESIRNEGHLAEAVKELAYR**
********RLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVEADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKEEKLELEQSQFLSSGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAASHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSEVRSQDAVYGLAVSIEGRETAWKWLKDNWDHISKTWGSGFLITRFISSIVSPFASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELAYRKY
*****GQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVEADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKEEKLELEQSQFLSSGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAASHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSEVRSQDAVYGLAVSIEGRETAWKWLKDNWDHISKTWGSGFLITRFISSIVSPFASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELAYRK*
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MEEFKGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVEADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKEEKLELEQSQFLSSGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAASHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSEVRSQDAVYGLAVSIEGRETAWKWLKDNWDHISKTWGSGFLITRFISSIVSPFASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELAYRKY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query775 2.2.26 [Sep-21-2011]
Q11011 920 Puromycin-sensitive amino yes no 0.705 0.594 0.506 1e-152
P55786 919 Puromycin-sensitive amino yes no 0.705 0.595 0.506 1e-151
A6NEC2478 Puromycin-sensitive amino no no 0.553 0.897 0.540 1e-123
Q9USX1 882 Aminopeptidase 1 OS=Schiz yes no 0.691 0.607 0.430 1e-121
P32454952 Aminopeptidase 2, mitocho yes no 0.661 0.538 0.432 1e-118
P37898856 Alanine/arginine aminopep no no 0.652 0.591 0.429 1e-117
Q59KZ1924 Aminopeptidase 2 OS=Candi N/A no 0.669 0.561 0.404 1e-116
Q5RFP3960 Endoplasmic reticulum ami no no 0.741 0.598 0.369 1e-112
Q6P179960 Endoplasmic reticulum ami no no 0.68 0.548 0.384 1e-112
Q9NZ08 941 Endoplasmic reticulum ami no no 0.695 0.572 0.373 1e-111
>sp|Q11011|PSA_MOUSE Puromycin-sensitive aminopeptidase OS=Mus musculus GN=Npepps PE=1 SV=2 Back     alignment and function desciption
 Score =  540 bits (1390), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 291/575 (50%), Positives = 365/575 (63%), Gaps = 28/575 (4%)

Query: 1   MEEFKGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINN 60
           M E +   RLP    P  Y + L PDL    F G +     V   T  IV+N AD+ I  
Sbjct: 46  MPEKRPFERLPAEVSPINYSLCLKPDLLDFTFEGKLEAAAQVRQATNQIVMNCADIDIIT 105

Query: 61  RSVSFTNKVSSKALEPTKVELVEADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYR 120
            S +       + +  T       DE + L F  TL TG G L I F G LNDKMKGFYR
Sbjct: 106 ASYA---PEGDEEIHATGFNYQNEDEKVTLSFPSTLQTGTGTLKIDFVGELNDKMKGFYR 162

Query: 121 SSYELN-GEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDE 179
           S Y    GE +  AVTQFE  DARR FPCWDEPA KATF I+L VP + VALSNM VID 
Sbjct: 163 SRYTTPAGEVRYAAVTQFEATDARRAFPCWDEPAIKATFDISLVVPKDRVALSNMNVIDR 222

Query: 180 KV---DGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFA 236
           K    D N+  V +  +P+MSTYLVA V+G +D+VE  + DG+ VRVY  VGKA QGKFA
Sbjct: 223 KPYPDDENLVEVKFARTPVMSTYLVAFVVGEYDFVETRSKDGVCVRVYTPVGKAEQGKFA 282

Query: 237 LNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAA 296
           L VA KTL  YK+YF VPY LPK+D+IAI DFAAGAMEN+GLVTYRETALL D ++S ++
Sbjct: 283 LEVAAKTLPFYKDYFNVPYPLPKIDLIAIADFAAGAMENWGLVTYRETALLIDPKNSCSS 342

Query: 297 NKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLD 356
           ++Q VA VV HELAHQWFGNLVTMEWWTHLWLNEGFA+W+ YL  D  FPE+ IWTQF+ 
Sbjct: 343 SRQWVALVVGHELAHQWFGNLVTMEWWTHLWLNEGFASWIEYLCVDHCFPEYDIWTQFVS 402

Query: 357 -ECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSL 415
            + T    LD L  SHPIEV V H  E+DEIFDAISY KGASVIRML +Y+G + F++ +
Sbjct: 403 ADYTRAQELDALDNSHPIEVSVGHPSEVDEIFDAISYSKGASVIRMLHDYIGDKDFKKGM 462

Query: 416 ASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKEEK----LEL 471
             Y+ K+   NA TEDLW +LE  SG+P+  +MN+WTKQ G+P+I V+ ++ +    L+L
Sbjct: 463 NMYLTKFQQKNAATEDLWESLESASGKPIAAVMNTWTKQMGFPLIYVEAEQVEDDRVLKL 522

Query: 472 EQSQFLSSGSPGD---GQWIVPITLCCG-SYDVCKNFLLYNKSDSFDIKELLGCSISKEG 527
            Q +F +SG  G     QW+VPIT+      +  K  +L +K +           + K  
Sbjct: 523 SQKKFCASGPYGGEDCPQWMVPITISTSEDPNQAKLKILMDKPEM--------SVVLKNV 574

Query: 528 DNGGWIKLNVNQTGFYRVKYDKDLAASHLDALLRG 562
               W+KLN+   GFYR +Y    +++ L++LL G
Sbjct: 575 KPDQWVKLNLGTVGFYRTQY----SSAMLESLLPG 605
Aminopeptidase with broad substrate specificity for several peptides. Involved in proteolytic events essential for cell growth and viability. May act as regulator of neuropeptide activity. Plays a role in the antigen-processing pathway for MHC class I molecules. Involved in the N-terminal trimming of cytotoxic T-cell epitope precursors. Digests the poly-Q peptides found in many cellular proteins.
Mus musculus (taxid: 10090)
EC: 3EC: .EC: 4EC: .EC: 1EC: 1EC: .EC: 1EC: 4
>sp|P55786|PSA_HUMAN Puromycin-sensitive aminopeptidase OS=Homo sapiens GN=NPEPPS PE=1 SV=2 Back     alignment and function description
>sp|A6NEC2|PSAL_HUMAN Puromycin-sensitive aminopeptidase-like protein OS=Homo sapiens GN=NPEPPSL1 PE=2 SV=3 Back     alignment and function description
>sp|Q9USX1|APE1_SCHPO Aminopeptidase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ape1 PE=3 SV=1 Back     alignment and function description
>sp|P32454|APE2_YEAST Aminopeptidase 2, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=APE2 PE=1 SV=4 Back     alignment and function description
>sp|P37898|AAP1_YEAST Alanine/arginine aminopeptidase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AAP1 PE=1 SV=2 Back     alignment and function description
>sp|Q59KZ1|APE2_CANAL Aminopeptidase 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=APE2 PE=1 SV=2 Back     alignment and function description
>sp|Q5RFP3|ERAP2_PONAB Endoplasmic reticulum aminopeptidase 2 OS=Pongo abelii GN=ERAP2 PE=2 SV=1 Back     alignment and function description
>sp|Q6P179|ERAP2_HUMAN Endoplasmic reticulum aminopeptidase 2 OS=Homo sapiens GN=ERAP2 PE=1 SV=2 Back     alignment and function description
>sp|Q9NZ08|ERAP1_HUMAN Endoplasmic reticulum aminopeptidase 1 OS=Homo sapiens GN=ERAP1 PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query775
343887278 911 aminopeptidase [Citrus unshiu] 0.658 0.559 0.898 0.0
225429582 880 PREDICTED: puromycin-sensitive aminopept 0.721 0.635 0.831 0.0
147772895 880 hypothetical protein VITISV_012143 [Viti 0.721 0.635 0.829 0.0
297798638 879 hypothetical protein ARALYDRAFT_491378 [ 0.72 0.634 0.809 0.0
357465783 876 Puromycin-sensitive aminopeptidase [Medi 0.713 0.631 0.811 0.0
22329112 879 aminopeptidase M1 [Arabidopsis thaliana] 0.72 0.634 0.811 0.0
224088784857 predicted protein [Populus trichocarpa] 0.707 0.639 0.826 0.0
356507019873 PREDICTED: puromycin-sensitive aminopept 0.709 0.630 0.817 0.0
255550101870 puromycin-sensitive aminopeptidase, puta 0.705 0.628 0.815 0.0
356514669873 PREDICTED: puromycin-sensitive aminopept 0.709 0.630 0.804 0.0
>gi|343887278|dbj|BAK61824.1| aminopeptidase [Citrus unshiu] Back     alignment and taxonomy information
 Score = 1013 bits (2620), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 506/563 (89%), Positives = 507/563 (90%), Gaps = 53/563 (9%)

Query: 1   MEEFKGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINN 60
           MEEFKGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINN
Sbjct: 1   MEEFKGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINN 60

Query: 61  RSVSFTNKVSSKALEPTKVELVEADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYR 120
           RSVSFTNK SSKALEPTKVELVEADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYR
Sbjct: 61  RSVSFTNKASSKALEPTKVELVEADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYR 120

Query: 121 SSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEK 180
           SSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEK
Sbjct: 121 SSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEK 180

Query: 181 VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDG----------IKVRVYCQVGKA 230
           VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDG          IKVRVYCQVGKA
Sbjct: 181 VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGTVTISIDSHGIKVRVYCQVGKA 240

Query: 231 NQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDD 290
           NQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDD
Sbjct: 241 NQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDD 300

Query: 291 QHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKI 350
           QHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKI
Sbjct: 301 QHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKI 360

Query: 351 WTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAEC 410
           WTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAEC
Sbjct: 361 WTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAEC 420

Query: 411 FQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKEEKLE 470
           FQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKV+EEKLE
Sbjct: 421 FQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVREEKLE 480

Query: 471 LEQSQFLSSGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNG 530
           LEQ                                             LGCSISKEGDNG
Sbjct: 481 LEQEL-------------------------------------------LGCSISKEGDNG 497

Query: 531 GWIKLNVNQTGFYRVKYDKDLAA 553
           GWIKLNVNQTGFYRVKYDKDLAA
Sbjct: 498 GWIKLNVNQTGFYRVKYDKDLAA 520

Source: Citrus unshiu

Species: Citrus unshiu

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225429582|ref|XP_002280239.1| PREDICTED: puromycin-sensitive aminopeptidase [Vitis vinifera] gi|296081675|emb|CBI20680.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147772895|emb|CAN73668.1| hypothetical protein VITISV_012143 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297798638|ref|XP_002867203.1| hypothetical protein ARALYDRAFT_491378 [Arabidopsis lyrata subsp. lyrata] gi|297313039|gb|EFH43462.1| hypothetical protein ARALYDRAFT_491378 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|357465783|ref|XP_003603176.1| Puromycin-sensitive aminopeptidase [Medicago truncatula] gi|355492224|gb|AES73427.1| Puromycin-sensitive aminopeptidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|22329112|ref|NP_195035.2| aminopeptidase M1 [Arabidopsis thaliana] gi|17473511|gb|AAL38379.1| AT4g33090/F4I10_20 [Arabidopsis thaliana] gi|24209879|gb|AAN41401.1| aminopeptidase M [Arabidopsis thaliana] gi|29028734|gb|AAO64746.1| At4g33090/F4I10_20 [Arabidopsis thaliana] gi|110742477|dbj|BAE99157.1| aminopeptidase like protein [Arabidopsis thaliana] gi|332660772|gb|AEE86172.1| aminopeptidase M1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224088784|ref|XP_002308539.1| predicted protein [Populus trichocarpa] gi|222854515|gb|EEE92062.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356507019|ref|XP_003522269.1| PREDICTED: puromycin-sensitive aminopeptidase-like [Glycine max] Back     alignment and taxonomy information
>gi|255550101|ref|XP_002516101.1| puromycin-sensitive aminopeptidase, putative [Ricinus communis] gi|223544587|gb|EEF46103.1| puromycin-sensitive aminopeptidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356514669|ref|XP_003526026.1| PREDICTED: puromycin-sensitive aminopeptidase-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query775
TAIR|locus:2125904879 APM1 "aminopeptidase M1" [Arab 0.713 0.629 0.791 0.0
ZFIN|ZDB-GENE-060524-3925 npepps "aminopeptidase puromyc 0.705 0.591 0.510 4.5e-178
FB|FBgn02612431075 Psa "Puromycin sensitive amino 0.732 0.528 0.472 9.8e-172
MGI|MGI:1101358920 Npepps "aminopeptidase puromyc 0.740 0.623 0.483 2.1e-169
UNIPROTKB|E9PLK3915 NPEPPS "Puromycin-sensitive am 0.741 0.628 0.482 4.3e-169
UNIPROTKB|P55786919 NPEPPS "Puromycin-sensitive am 0.741 0.625 0.482 4.3e-169
UNIPROTKB|E1BP91921 NPEPPS "Uncharacterized protei 0.741 0.624 0.481 4.3e-169
UNIPROTKB|F1M9V7920 Npepps "Protein Npepps" [Rattu 0.740 0.623 0.483 4.3e-169
UNIPROTKB|F1RWJ6923 LOC414413 "Uncharacterized pro 0.741 0.622 0.478 1.7e-167
UNIPROTKB|F1P456837 NPEPPS "Uncharacterized protei 0.650 0.602 0.511 9.1e-167
TAIR|locus:2125904 APM1 "aminopeptidase M1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2350 (832.3 bits), Expect = 0., Sum P(2) = 0.
 Identities = 441/557 (79%), Positives = 489/557 (87%)

Query:     1 MEEFKGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINN 60
             M++FKG+PRLPKFAVPKRYD+RL PDL +C F G+VAID+D+V DT+FIVLNAADL++N+
Sbjct:     1 MDQFKGEPRLPKFAVPKRYDLRLNPDLIACTFTGTVAIDLDIVADTRFIVLNAADLSVND 60

Query:    61 RSVSFTNKVSSKALEPTKVELVEADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYR 120
              SVSFT   SSKAL   KV L E DEILVLEF E LP G+GVL +GF GVLNDKMKGFYR
Sbjct:    61 ASVSFTPPSSSKALAAPKVVLFEEDEILVLEFGEILPHGVGVLKLGFNGVLNDKMKGFYR 120

Query:   121 SSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEK 180
             S+YE NGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITL+VP++LVALSNMP+++EK
Sbjct:   121 STYEHNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLEVPTDLVALSNMPIMEEK 180

Query:   181 VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVA 240
             V+GN+K VSYQESPIMSTYLVA+V+GLFDYVEDHTSDGIKVRVYCQVGKA+QGKFAL+V 
Sbjct:   181 VNGNLKIVSYQESPIMSTYLVAIVVGLFDYVEDHTSDGIKVRVYCQVGKADQGKFALHVG 240

Query:   241 VKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQR 300
              KTL+L+KEYFAVPY LPK+DMIAIPDFAAGAMENYGLVTYRETALLYD+QHSAA+NKQR
Sbjct:   241 AKTLDLFKEYFAVPYPLPKMDMIAIPDFAAGAMENYGLVTYRETALLYDEQHSAASNKQR 300

Query:   301 VATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTE 360
             VATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLA DSLFPEWKIWTQFLDE TE
Sbjct:   301 VATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLATDSLFPEWKIWTQFLDESTE 360

Query:   361 GLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIK 420
             GLRLDGL ESHPIEVEVNH  EIDEIFDAISYRKGASVIRMLQ+YLGAE FQ+SLA+YIK
Sbjct:   361 GLRLDGLEESHPIEVEVNHAAEIDEIFDAISYRKGASVIRMLQSYLGAEVFQKSLAAYIK 420

Query:   421 KYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVIXXXXXXXXXXXXXXXXXXXG 480
              +A SNAKTEDLWAALE GSGEPVNKLM+SWTKQKGYPV+                   G
Sbjct:   421 NHAYSNAKTEDLWAALEAGSGEPVNKLMSSWTKQKGYPVVSAKIKDGKLELEQSRFLSSG 480

Query:   481 SPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGD--NG--GWIKLN 536
             SPG+GQWIVP+TLCCGSY+  KNFLL +KS ++D+KELLGCSI+   D  NG   WIK+N
Sbjct:   481 SPGEGQWIVPVTLCCGSYEKRKNFLLESKSGAYDLKELLGCSIADGSDKINGTCSWIKIN 540

Query:   537 VNQTGFYRVKYDKDLAA 553
             V+Q GFYRVKYD  LAA
Sbjct:   541 VDQAGFYRVKYDDSLAA 557
GO:0004177 "aminopeptidase activity" evidence=IEA;IDA
GO:0005634 "nucleus" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA
GO:0008237 "metallopeptidase activity" evidence=IEA
GO:0008270 "zinc ion binding" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
GO:0009926 "auxin polar transport" evidence=TAS
GO:0005829 "cytosol" evidence=IDA
GO:0006094 "gluconeogenesis" evidence=RCA
GO:0007010 "cytoskeleton organization" evidence=RCA
GO:0010359 "regulation of anion channel activity" evidence=RCA
GO:0010498 "proteasomal protein catabolic process" evidence=RCA
ZFIN|ZDB-GENE-060524-3 npepps "aminopeptidase puromycin sensitive" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0261243 Psa "Puromycin sensitive aminopeptidase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
MGI|MGI:1101358 Npepps "aminopeptidase puromycin sensitive" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E9PLK3 NPEPPS "Puromycin-sensitive aminopeptidase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|P55786 NPEPPS "Puromycin-sensitive aminopeptidase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E1BP91 NPEPPS "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1M9V7 Npepps "Protein Npepps" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1RWJ6 LOC414413 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1P456 NPEPPS "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P95928APE2_SULSO3, ., 4, ., 1, 1, ., 10.32140.88640.8751yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.3.2LOW CONFIDENCE prediction!
3rd Layer3.4.110.921
3rd Layer3.3.2.6LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00032225001
SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (877 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00010470001
SubName- Full=Chromosome chr17 scaffold_263, whole genome shotgun sequence; (386 aa)
   • •  0.427
GSVIVG00014791001
SubName- Full=Putative uncharacterized protein (Chromosome chr18 scaffold_1, whole genome shotg [...] (309 aa)
   • •  0.411

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query775
cd09601446 cd09601, M1_APN_2, Peptidase M1 Aminopeptidase N f 0.0
pfam01433390 pfam01433, Peptidase_M1, Peptidase family M1 1e-173
COG0308859 COG0308, PepN, Aminopeptidase N [Amino acid transp 1e-143
cd09602438 cd09602, M1_APN_3, Peptidase M1 family containing 7e-96
TIGR02412831 TIGR02412, pepN_strep_liv, aminopeptidase N, Strep 2e-73
cd09603415 cd09603, M1_APN_4, Peptidase M1 family Aminopeptid 2e-70
cd09595407 cd09595, M1, Peptidase M1 family contains aminopep 4e-69
TIGR02414 863 TIGR02414, pepN_proteo, aminopeptidase N, Escheric 3e-37
cd09600 861 cd09600, M1_APN_1, Peptidase M1 family containing 1e-33
pfam11838323 pfam11838, DUF3358, Domain of unknown function (DU 2e-30
cd09604435 cd09604, M1_APN_5, Peptidase M1 family containing 8e-30
cd09599442 cd09599, M1_LTA4H, Peptidase M1 family contains le 3e-29
TIGR02411602 TIGR02411, leuko_A4_hydro, leukotriene A-4 hydrola 3e-27
pfam13485128 pfam13485, Peptidase_MA_2, Peptidase MA superfamil 7e-20
PRK14015 875 PRK14015, pepN, aminopeptidase N; Provisional 1e-16
cd09839507 cd09839, M1_TAF2, TATA binding protein (TBP) assoc 2e-16
COG0308859 COG0308, PepN, Aminopeptidase N [Amino acid transp 8e-07
cd09594125 cd09594, GluZincin, Peptidase Gluzincin family (th 3e-05
>gnl|CDD|189008 cd09601, M1_APN_2, Peptidase M1 Aminopeptidase N family incudes tricorn interacting factor F3, Endoplasmic reticulum aminopeptidase 1 (ERAP1), Aminopeptidase Q (APQ) Back     alignment and domain information 
 Score =  700 bits (1810), Expect = 0.0
 Identities = 249/446 (55%), Positives = 309/446 (69%), Gaps = 6/446 (1%)

Query: 18  RYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPT 77
            YD+ LTPDL +  F GSV I ++V   T  IVL+A DLTI + +V+     +   L   
Sbjct: 2   HYDLTLTPDLDNFTFSGSVTITLEVTEPTNEIVLHAKDLTITSATVTVGG-GNVDILVTI 60

Query: 78  KVELVEADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYRSSY-ELNGEKKNMAVTQ 136
                    ++ L+   TL  G   L I F G LND ++GFYRSSY +  GE + +A TQ
Sbjct: 61  TYSEENEFLVITLDEPLTLAGGNYTLTIEFTGELNDDLRGFYRSSYTDNGGETRYLAATQ 120

Query: 137 FEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEKV-DGNMKTVSYQESPI 195
           FEP DARR FPC+DEPA KATF IT+  P+   ALSNMPV  E+V     KT  ++ +P 
Sbjct: 121 FEPTDARRAFPCFDEPAFKATFTITITHPAGYTALSNMPVESEEVLGDGWKTTEFETTPP 180

Query: 196 MSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAVPY 255
           MSTYLVA V+G FDYVE  T +G+ VRVY + GK  QG +AL VA K LE +++YF +PY
Sbjct: 181 MSTYLVAFVVGDFDYVEGTTKNGVPVRVYARPGKIEQGDYALEVAPKILEFFEDYFGIPY 240

Query: 256 SLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFG 315
            LPKLD++AIPDFAAGAMEN+GL+TYRETALLYD + S+A+NKQRVATVVAHELAHQWFG
Sbjct: 241 PLPKLDLVAIPDFAAGAMENWGLITYRETALLYDPKTSSASNKQRVATVVAHELAHQWFG 300

Query: 316 NLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQF-LDECTEGLRLDGLAESHPIE 374
           NLVTM+WW  LWLNEGFAT++ YL  D L PEW +W QF LD+    L LD LA SHPI 
Sbjct: 301 NLVTMKWWDDLWLNEGFATYMEYLGVDHLEPEWNMWDQFVLDDLQSALALDSLASSHPIS 360

Query: 375 VEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWA 434
           V V    EI EIFDAISY KGASV+RML+++LG E F++ L +Y+KK+A  NA T+DLW 
Sbjct: 361 VPVETPDEISEIFDAISYSKGASVLRMLEHFLGEEVFRKGLRNYLKKHAYGNATTDDLWE 420

Query: 435 ALEE--GSGEPVNKLMNSWTKQKGYP 458
           AL E    G+ V ++M++WT Q GYP
Sbjct: 421 ALSEASKLGKDVKEIMDTWTLQPGYP 446

This M1 peptidase family includes eukaryotic and bacterial members: aminopeptidase N (APN), aminopeptidase Q (APQ, laeverin), endoplasmic reticulum aminopeptidase 1 (ERAP1) as well as tricorn interacting factor F3. Aminopeptidase N (APN; CD13; Alanyl aminopeptidase; EC 3.4.11.2), a Type II integral membrane protease, consists of a small N-terminal cytoplasmic domain, a single transmembrane domain and a large extracellular ectodomain that contains the active site. It preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is considered a marker of differentiation since it is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. ERAP1 also known as endoplasmic reticulum aminopeptidase associated with antigen processing (ERAAP), adipocyte derived leucine aminopeptidase (A-LAP) or aminopeptidase regulating tumor necrosis factor receptor I (THFRI) shedding (ARTS-1), associates with the closely related ER aminopeptidase ERAP2, for the final trimming of peptides within the ER for presentation by MHC class I molecules. ERAP1 is associated with ankylosing spondylitis (AS), an inflammatory arthritis that predominantly affects the spine. ERAP1 also aids in the shedding of membrane-bound cytokine receptors. The tricorn interacting factor F3, together with factors F1 and F2, degrades the tricorn protease products, producing free amino acids, thus completing the proteasomal degradation pathway. F3 is homologous to F2, but not F1, and shows a strong preference for glutamate in the P1' position. APQ, also known as laeverin, is specifically expressed in human embryo-derived extravillous trophoblasts (EVTs) that invade the uterus during early placentation. It cleaves the N-terminal amino acid of various peptides such as angiotensin III, endokinin C, and kisspeptin-10, all expressed in the placenta in large quantities. APN is a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs are also putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established. Length = 446
>gnl|CDD|216501 pfam01433, Peptidase_M1, Peptidase family M1 Back     alignment and domain information
>gnl|CDD|223385 COG0308, PepN, Aminopeptidase N [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|189009 cd09602, M1_APN_3, Peptidase M1 family containing Aminopeptidase N Back     alignment and domain information
>gnl|CDD|233857 TIGR02412, pepN_strep_liv, aminopeptidase N, Streptomyces lividans type Back     alignment and domain information
>gnl|CDD|189010 cd09603, M1_APN_4, Peptidase M1 family Aminopeptidase N Back     alignment and domain information
>gnl|CDD|189002 cd09595, M1, Peptidase M1 family contains aminopeptidase N and leukotriene A4 hydrolase Back     alignment and domain information
>gnl|CDD|233858 TIGR02414, pepN_proteo, aminopeptidase N, Escherichia coli type Back     alignment and domain information
>gnl|CDD|189007 cd09600, M1_APN_1, Peptidase M1 family containing Aminopeptidase N Back     alignment and domain information
>gnl|CDD|221257 pfam11838, DUF3358, Domain of unknown function (DUF3358) Back     alignment and domain information
>gnl|CDD|189011 cd09604, M1_APN_5, Peptidase M1 family containing bacterial Aminopeptidase N Back     alignment and domain information
>gnl|CDD|189006 cd09599, M1_LTA4H, Peptidase M1 family contains leukotriene A4 hydrolase Back     alignment and domain information
>gnl|CDD|233856 TIGR02411, leuko_A4_hydro, leukotriene A-4 hydrolase/aminopeptidase Back     alignment and domain information
>gnl|CDD|222169 pfam13485, Peptidase_MA_2, Peptidase MA superfamily Back     alignment and domain information
>gnl|CDD|237585 PRK14015, pepN, aminopeptidase N; Provisional Back     alignment and domain information
>gnl|CDD|189018 cd09839, M1_TAF2, TATA binding protein (TBP) associated factor 2 Back     alignment and domain information
>gnl|CDD|223385 COG0308, PepN, Aminopeptidase N [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|189001 cd09594, GluZincin, Peptidase Gluzincin family (thermolysin-like proteinases, TLPs) includes peptidases M1, M2, M3, M4, M13, M32 and M36 (fungalysins) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 775
KOG1046882 consensus Puromycin-sensitive aminopeptidase and r 100.0
TIGR02412831 pepN_strep_liv aminopeptidase N, Streptomyces livi 100.0
COG0308859 PepN Aminopeptidase N [Amino acid transport and me 100.0
TIGR02414863 pepN_proteo aminopeptidase N, Escherichia coli typ 100.0
PRK14015875 pepN aminopeptidase N; Provisional 100.0
TIGR02411601 leuko_A4_hydro leukotriene A-4 hydrolase/aminopept 100.0
PF01433390 Peptidase_M1: Peptidase family M1 This is family M 100.0
KOG1047613 consensus Bifunctional leukotriene A4 hydrolase/am 100.0
KOG1932 1180 consensus TATA binding protein associated factor [ 100.0
PF11838324 ERAP1_C: ERAP1-like C-terminal domain; InterPro: I 100.0
COG3975558 Predicted protease with the C-terminal PDZ domain 99.3
PF13485128 Peptidase_MA_2: Peptidase MA superfamily 99.16
PF10460366 Peptidase_M30: Peptidase M30; InterPro: IPR019501 97.53
PF05299122 Peptidase_M61: M61 glycyl aminopeptidase; InterPro 97.32
PF07607128 DUF1570: Protein of unknown function (DUF1570); In 95.84
PF11940367 DUF3458: Domain of unknown function (DUF3458); Int 95.72
PF04450205 BSP: Peptidase of plants and bacteria; InterPro: I 95.3
PF10026195 DUF2268: Predicted Zn-dependent protease (DUF2268) 93.07
PRK04860160 hypothetical protein; Provisional 89.56
PF1364688 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2I 85.46
PF01863205 DUF45: Protein of unknown function DUF45; InterPro 84.96
COG4324376 Predicted aminopeptidase [General function predict 83.85
PF03272775 Enhancin: Viral enhancin protein; InterPro: IPR004 82.14
smart00731146 SprT SprT homologues. Predicted to have roles in t 81.8
PF10023337 DUF2265: Predicted aminopeptidase (DUF2265); Inter 81.25
>KOG1046 consensus Puromycin-sensitive aminopeptidase and related aminopeptidases [Amino acid transport and metabolism; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=2e-138  Score=1222.40  Aligned_cols=750  Identities=50%  Similarity=0.824  Sum_probs=687.2

Q ss_pred             ccCCCCCCCCCceeeEEEEEEEecCCCCeEEEEEEEEEEEECCCCEEEEEeCCceeeEeEeeeccCCCCccccCeeEEEe
Q 004076            3 EFKGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELV   82 (775)
Q Consensus         3 ~~~~~~rLp~~v~p~~Y~l~l~~~~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~v~~~~~~~~~~~~~~~~~~~   82 (775)
                      ++...+|||++++|+||+|.|.+++....|.|++.|.+++.++++.|+||+.+++|.++.+...................
T Consensus        24 ~~~~~~rLP~~v~P~~Y~l~l~~~l~~~~f~G~v~I~l~v~~~t~~i~Lh~~~l~i~~~~~~~~~~~~~~~~~~~~~~~~  103 (882)
T KOG1046|consen   24 KFPNEYRLPTNVVPLHYDLTLKPDLEEFTFTGSVKISLEVSEATRFIVLHAKDLKITSASLVSRPSSGSVQLEVSVEEKE  103 (882)
T ss_pred             cccccccCCCCCCCceeEEEEecCCcCCcceeEEEEEEEEecccCEEEEEhhhccceeEEEEecCCCCcccccccccccc
Confidence            34467999999999999999999999999999999999999999999999999999999986532211111111111111


Q ss_pred             cCCeEEEEEeCCCcCCc-eEEEEEEEEeccCCCCcceEEEeecc-CCeeeeccccCCCCCCCCceeeccCCCCCeeEEEE
Q 004076           83 EADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYEL-NGEKKNMAVTQFEPADARRCFPCWDEPACKATFKI  160 (775)
Q Consensus        83 ~~~~~l~i~l~~~l~~g-~~~l~i~y~g~~~~~~~G~y~~~y~~-~g~~~~~~~t~~ep~~Ar~~fPc~DeP~~ka~f~l  160 (775)
                      .. +.+.+.+++++.+| .|+|+|.|.|.+++++.|||+++|.+ .+..+++++|||||++||++|||||||++||+|+|
T Consensus       104 ~~-~~l~~~~~~~l~~~~~y~L~i~f~g~l~~~~~G~y~s~y~~~~~~~~~~~~Tqfept~AR~~FPCfDeP~~KAtF~I  182 (882)
T KOG1046|consen  104 QE-ETLVFPLNETLLAGSSYTLTIEFTGKLNDSSEGFYRSSYTDSEGSEKSIAATQFEPTDARRAFPCFDEPAFKATFTI  182 (882)
T ss_pred             cc-eEEEEEcccccccCCeEEEEEEEeEeecCCcceeeeecccCCCCceEEEEEeccCccchhhcCCCCCcccccCceEE
Confidence            11 67888898999999 79999999999999999999999987 46668999999999999999999999999999999


Q ss_pred             EEEECCCCeEeeCCCccce-eecCceEEEEEeeCCCCcceEEEEEEeeeeEEeecccCCeEEEEEEeCCccchHHHHHHH
Q 004076          161 TLDVPSELVALSNMPVIDE-KVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNV  239 (775)
Q Consensus       161 ~i~~p~~~~~isn~~~~~~-~~~~~~~~~~F~~t~~m~~yl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~~l~~  239 (775)
                      +|.||++++|+|||++.++ ..++++++++|++||+||||++||+||+|+..+..+.+|+++++|++|+...+.+++++.
T Consensus       183 tl~hp~~~~aLSNm~v~~~~~~~~~~~~~~F~~Tp~MstYLvAf~V~~f~~~e~~~~~~v~vrv~a~p~~~~~~~~al~~  262 (882)
T KOG1046|consen  183 TLVHPKGYTALSNMPVIKEEPVDDGWKTTTFEKTPKMSTYLVAFAVGDFVYVETITKSGVPVRVYARPEKINQGQFALEV  262 (882)
T ss_pred             EEEecCCceEeecCcccccccccCCeeEEEEEecCCCchhhheeeeeccccceeecCCCceEEEEeChHHhhHHHHHHHH
Confidence            9999999999999999876 444559999999999999999999999999999888889999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCCCCccceeecCCCCCccccccccceeecccccccCCCCcHHHHHHHHHHHHHHHHHHhhcCccC
Q 004076          240 AVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVT  319 (775)
Q Consensus       240 ~~~~l~~~e~~~g~~yp~~k~d~v~~p~~~~g~mE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlVt  319 (775)
                      +.++|++|+++||+|||+||+|+|++|+|..|||||||||+|++..+|+++..++..++++++.+||||+|||||||+||
T Consensus       263 ~~~~L~~~e~~f~i~yPLpK~D~iavPdf~~GAMENwGLvtyre~~lL~~~~~ss~~~k~~va~vIaHElAHQWFGNLVT  342 (882)
T KOG1046|consen  263 ATKVLEFYEDYFGIPYPLPKLDLVAVPDFSAGAMENWGLVTYRETALLYDPQTSSSSNKQRVAEVIAHELAHQWFGNLVT  342 (882)
T ss_pred             HHHHHHHHHHHhCCCCCCccccEEecCCccccchhcCcceeeeehhhccCCCcCcHHHHHHHHHHHHHHHHHHHhcCccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCccchhHHhhhHHHHHHHHHHhhhCCchhHHHHHHHHHH-HHhhhcccCCCCCeEeecCCcchhhhcccchhcchhhHH
Q 004076          320 MEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECT-EGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASV  398 (775)
Q Consensus       320 ~~~w~d~WL~EGfA~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~pi~~~~~~~~~~~~~f~~i~Y~Kg~~v  398 (775)
                      |+||+|+|||||||+|+++++++..+|+|..+++++...+ .++..|+..++||+..++.++.++++.||.++|.||++|
T Consensus       343 m~wW~dLWLnEGfAt~~~~~~v~~~~p~~~~~~~~~~~~l~~~l~~D~l~~shpi~~~v~~~~ei~e~fd~i~Y~KGasv  422 (882)
T KOG1046|consen  343 MKWWNDLWLNEGFATYVEYLAVDHLFPEWDIWEQFLLENLERVLSLDALASSHPISVPVESPSEIDEIFDEISYQKGASV  422 (882)
T ss_pred             HhhhhhhhhcccHHHHHHHHhhccCCcchhhHHHHHHHHHHHHhhhhcccccCCeeeecCCcchhhhhhhhhhhhHHHHH
Confidence            9999999999999999999999999999999999887777 579999999999999999999999999999999999999


Q ss_pred             HHHHHHhhCHHHHHHHHHHHHHHhccCCCCHHHHHHHHHhccCCCHHHHHHHhhcCCCcceEEEEEeCcEEEEEEEeecc
Q 004076          399 IRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKEEKLELEQSQFLS  478 (775)
Q Consensus       399 l~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~~g~~l~~~~~~W~~~~g~P~~~v~~~~~~~~l~Q~rf~~  478 (775)
                      ||||+.++|++.|++||+.||.+|+|+|++++|||++|+...+.|++++|+.|+.|+|||+|+|.++++.++++|+||..
T Consensus       423 lRML~~~lGe~~F~~gi~~yL~~~~y~na~~~DLw~~l~~~~~~~v~~~M~~Wt~Q~G~Pvv~V~~~~~~~~l~Q~rf~~  502 (882)
T KOG1046|consen  423 LRMLESLLGEEVFRKGLRSYLKKHQYSNAKTEDLWDALEEGSGLDVSELMDTWTKQMGYPVVTVERNGDSLTLTQERFLS  502 (882)
T ss_pred             HHHHHHHHCHHHHHHHHHHHHHHhccCCCCchhHHHHHhccCCCCHHHHHhhhhcCCCCceEEEEecCCEEEEehhhhcc
Confidence            99999999999999999999999999999999999999988999999999999999999999999999999999999988


Q ss_pred             CCC--CCCCeEEEEEEEEeccccceeeeEeeccceEEEecccccccccCCCCCCceEEEccCceEEEEEecchhhHH---
Q 004076          479 SGS--PGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAA---  553 (775)
Q Consensus       479 ~~~--~~~~~w~iPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wi~~N~~~~gyyrV~Yd~~~w~---  553 (775)
                      ...  ....+|+||++|.+...+....+++..++..+.++.         ++  +||++|.++.|||||+||.++|.   
T Consensus       503 ~~~~~~~~~~w~iPl~~~~~~~~~~~~~~~~~~~~~~~l~~---------~~--~wi~~N~~~~g~yRV~Yd~~~w~~l~  571 (882)
T KOG1046|consen  503 DPDPSEDNYLWWIPLTYTTSGSGSVPKFWLSSKSTTIKLPE---------SD--QWIKVNLEQTGYYRVNYDDENWALLI  571 (882)
T ss_pred             CCCccccCcccceeEEEEcCCCCccceeeecCCCcceecCC---------CC--eEEEEeCCcceEEEEEeCHHHHHHHH
Confidence            654  334699999999887665445678887777777753         34  69999999999999999999999   


Q ss_pred             --------------------------------------------------------------------------------
Q 004076          554 --------------------------------------------------------------------------------  553 (775)
Q Consensus       554 --------------------------------------------------------------------------------  553 (775)
                                                                                                      
T Consensus       572 ~~l~~~~~~~~~~Ra~li~D~~~la~~~~~~~~~~l~l~~~l~~e~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l  651 (882)
T KOG1046|consen  572 EQLKNHESLSVIDRAQLINDAFALARAGRLPYSIALNLISYLKNETDYVPWSAAIRSLYKLHSLEDTEIYSKFKEFVKKL  651 (882)
T ss_pred             HHHhhcCccCHhHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhcccccchHHHHHHHHHHHhhcccchHHHHHHHHHHHH
Confidence                                                                                            


Q ss_pred             --------------HH-HHHHhHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCCChhhHHHHHHHhhhhcccCCHH
Q 004076          554 --------------SH-LDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRS  618 (775)
Q Consensus       554 --------------~~-~~~~~R~~ll~~ac~~g~~~ci~~a~~~f~~~~~~~~~~~i~~~lr~~v~~~~~~~~~~g~~~  618 (775)
                                    .+ .+..+|..++..||..|+++|+..|..+|++|+..  +..+|+++|.   .+||.++++|+++
T Consensus       652 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~a~~~f~~~~~~--~~~ip~~lr~---~vy~~~~~~g~~~  726 (882)
T KOG1046|consen  652 ILPIFEKLGWSDGADSSLDNMLRVSVLSFACRFGHEECLKKAVELFRQWLAG--TNPIPPDLRE---VVYCTAVQFGTEE  726 (882)
T ss_pred             HHHHHHHhcCCccccchhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhc--CCCCChhhhh---hhhhHHHHhcCHh
Confidence                          11 34679999999999999999999999999999987  7789999999   5566677899999


Q ss_pred             HHHHHHHHHHcCCCHHHHHHHHHHhcCCCcHHHHHHHHHHhcc-Ccccccceeeeee-Eccc--cHHHHHHHHHHHHHHH
Q 004076          619 GYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLS-SEVRSQDAVYGLA-VSIE--GRETAWKWLKDNWDHI  694 (775)
Q Consensus       619 ~~~~l~~~y~~~~~~~ek~~ll~aL~~~~d~~~l~~~L~~~l~-~~ir~qd~~~~~~-v~~~--g~~~~w~fl~~n~~~i  694 (775)
                      .|++++++|+++.++.||..++.||+|+++++.++++|++.++ +.++.||...++. ++.|  |..+||+|+++||+.+
T Consensus       727 ~w~~~~~~y~~~~~~~e~~~~l~al~~~~~~~~l~~~l~~~~~~~~v~~qd~~~~~~~~~~~~~g~~~a~~~~~~n~~~l  806 (882)
T KOG1046|consen  727 DWEQLLELYKKETTAAEKRKLLNALSCSKDPWLLQRLLDLAFDAENVRDQDVLTLLQGISGNPRGVELAWKFLQDNWKEL  806 (882)
T ss_pred             HHHHHHHHHhccccHHHHHHHHHHhccCccHHHHHHHHHHhcccccccchhHHHHHHHHhcCcccHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999988 4799999999999 8777  9999999999999999


Q ss_pred             HHHhCCCcchhHHHHHhhccCCCHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhhh
Q 004076          695 SKTWGSGFLITRFISSIVSPFASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELA  771 (775)
Q Consensus       695 ~~~~~~~~~l~~~i~~~~~~~~t~~~~~~~~~Ff~~~~~~~~~~~~~~~le~i~~ni~W~~~~~~~~~i~~wl~~~~  771 (775)
                      .++|++.+.+.+++..+++.+.++.+++++++||...+..+..+++++++|.++.|+.|.+++...  +.+||.+..
T Consensus       807 ~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~le~~~~ni~W~~~~~~~--l~~~l~~~~  881 (882)
T KOG1046|consen  807 LNRYGNNFELSRLISFITEPFATEEKLDEVEKFFADIPKTGAERALQQALETVKANIQWVERNEEN--LTQWLLEAL  881 (882)
T ss_pred             HHhcCCcHHHHHHHHHHHhccCCHHHHHHHHHHHhcCCcchhhHHHHHHHHHHHhhhhHHHhhHHH--HHHHHHHhc
Confidence            999995578999999999999999999999999999877667999999999999999999999988  999998753

>TIGR02412 pepN_strep_liv aminopeptidase N, Streptomyces lividans type Back     alignment and domain information
>COG0308 PepN Aminopeptidase N [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR02414 pepN_proteo aminopeptidase N, Escherichia coli type Back     alignment and domain information
>PRK14015 pepN aminopeptidase N; Provisional Back     alignment and domain information
>TIGR02411 leuko_A4_hydro leukotriene A-4 hydrolase/aminopeptidase Back     alignment and domain information
>PF01433 Peptidase_M1: Peptidase family M1 This is family M1 in the peptidase classification Back     alignment and domain information
>KOG1047 consensus Bifunctional leukotriene A4 hydrolase/aminopeptidase LTA4H [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones; Defense mechanisms; Amino acid transport and metabolism] Back     alignment and domain information
>KOG1932 consensus TATA binding protein associated factor [Transcription] Back     alignment and domain information
>PF11838 ERAP1_C: ERAP1-like C-terminal domain; InterPro: IPR024571 This entry represents the uncharacterised C-terminal domain of zinc metallopeptidases belonging to MEROPS peptidase family M1 (aminopeptidase N, clan MA), with a single member characterised in Streptomyces lividans: aminopeptidase G [] Back     alignment and domain information
>COG3975 Predicted protease with the C-terminal PDZ domain [General function prediction only] Back     alignment and domain information
>PF13485 Peptidase_MA_2: Peptidase MA superfamily Back     alignment and domain information
>PF10460 Peptidase_M30: Peptidase M30; InterPro: IPR019501 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF05299 Peptidase_M61: M61 glycyl aminopeptidase; InterPro: IPR007963 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF07607 DUF1570: Protein of unknown function (DUF1570); InterPro: IPR011464 This entry represents hypothetical proteins confined to bacteria Back     alignment and domain information
>PF11940 DUF3458: Domain of unknown function (DUF3458); InterPro: IPR024601 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF04450 BSP: Peptidase of plants and bacteria; InterPro: IPR007541 These basic secretory proteins (BSPs) are believed to be part of the plants defence mechanism against pathogens [] Back     alignment and domain information
>PF10026 DUF2268: Predicted Zn-dependent protease (DUF2268); InterPro: IPR018728 This domain, found in various hypothetical bacterial proteins, as well as predicted zinc dependent proteases, has no known function Back     alignment and domain information
>PRK04860 hypothetical protein; Provisional Back     alignment and domain information
>PF13646 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2IAE_A 3B2A_A Back     alignment and domain information
>PF01863 DUF45: Protein of unknown function DUF45; InterPro: IPR002725 Members of this family are found in some archaebacteria, as well as Helicobacter pylori Back     alignment and domain information
>COG4324 Predicted aminopeptidase [General function prediction only] Back     alignment and domain information
>PF03272 Enhancin: Viral enhancin protein; InterPro: IPR004954 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>smart00731 SprT SprT homologues Back     alignment and domain information
>PF10023 DUF2265: Predicted aminopeptidase (DUF2265); InterPro: IPR014553 This group represents a predicted aminopeptidase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query775
3se6_A 967 Crystal Structure Of The Human Endoplasmic Reticulu 1e-108
3se6_A967 Crystal Structure Of The Human Endoplasmic Reticulu 2e-11
4e36_A 967 Crystal Structure Of The Human Endoplasmic Reticulu 1e-108
4e36_A967 Crystal Structure Of The Human Endoplasmic Reticulu 2e-11
3qnf_A 954 Crystal Structure Of The Open State Of Human Endopl 1e-107
3qnf_A954 Crystal Structure Of The Open State Of Human Endopl 2e-04
2yd0_A 897 Crystal Structure Of The Soluble Domain Of Human En 1e-107
2yd0_A897 Crystal Structure Of The Soluble Domain Of Human En 2e-04
3mdj_A 921 Er Aminopeptidase, Erap1, Bound To The Zinc Aminope 1e-106
3mdj_A921 Er Aminopeptidase, Erap1, Bound To The Zinc Aminope 1e-04
4fyq_A 903 Human Aminopeptidase N (Cd13) Length = 903 1e-104
4fyq_A903 Human Aminopeptidase N (Cd13) Length = 903 5e-06
4fke_A 909 Crystal Structure Of Porcine Aminopeptidase-N Lengt 1e-103
4fke_A909 Crystal Structure Of Porcine Aminopeptidase-N Lengt 2e-08
4f5c_A 959 Crystal Structure Of The Spike Receptor Binding Dom 1e-103
4f5c_A959 Crystal Structure Of The Spike Receptor Binding Dom 2e-08
4h5h_A 908 Crystal Structure Of Porcine Aminopeptidase-N Compl 1e-103
4h5h_A908 Crystal Structure Of Porcine Aminopeptidase-N Compl 2e-08
4hol_A 908 Crystal Structure Of Porcine Aminopeptidase-N Compl 1e-103
4hol_A908 Crystal Structure Of Porcine Aminopeptidase-N Compl 2e-08
3q7j_A780 Engineered Thermoplasma Acidophilum F3 Factor Mimic 1e-97
1z1w_A780 Crystal Structures Of The Tricorn Interacting Facor 2e-97
3ebi_A 890 Structure Of The M1 Alanylaminopeptidase From Malar 8e-31
3q43_A 891 X-Ray Crystal Structure Of Pfa-M1 Bound To Bestatin 8e-31
3ebg_A 889 Structure Of The M1 Alanylaminopeptidase From Malar 9e-31
3t8v_A 895 A Bestatin-Based Chemical Biology Strategy Reveals 3e-30
3u9w_A608 Structure Of Human Leukotriene A4 Hydrolase In Comp 5e-24
1hs6_A611 Structure Of Leukotriene A4 Hydrolase Complexed Wit 5e-24
2r59_A616 Leukotriene A4 Hydrolase Complexed With Inhibitor R 5e-24
3cho_A610 Crystal Structure Of Leukotriene A4 Hydrolase In Co 5e-24
1sqm_A610 Structure Of [r563a] Leukotriene A4 Hydrolase Lengt 6e-24
1gw6_A610 Structure Of Leukotriene A4 Hydrolase D375n Mutant 6e-24
1h19_A611 Structure Of [e271q] Leukotriene A4 Hydrolase Lengt 1e-23
3b7s_A616 [e296q]lta4h In Complex With Rsr Substrate Length = 1e-23
2dq6_A 870 Crystal Structure Of Aminopeptidase N From Escheric 4e-22
2hpo_A 891 Structure Of Aminopeptidase N From E. Coli Suggests 4e-22
3puu_A 891 Crystal Structure Of Glu121gln Mutant Of E. Coli Am 9e-22
2xq0_A632 Structure Of Yeast Lta4 Hydrolase In Complex With B 4e-19
2xpy_A632 Structure Of Native Leukotriene A4 Hydrolase From S 8e-19
3cia_A605 Crystal Structure Of Cold-Aminopeptidase From Colwe 2e-18
2gtq_A 867 Crystal Structure Of Aminopeptidase N From Human Pa 1e-17
3rjo_A419 Crystal Structure Of Erap1 Peptide Binding Domain L 2e-04
>pdb|3SE6|A Chain A, Crystal Structure Of The Human Endoplasmic Reticulum Aminopeptidase 2 Length = 967 Back     alignment and structure 
Iteration: 1

 Score =  390 bits (1003), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 218/582 (37%), Positives = 320/582 (54%), Gaps = 55/582 (9%)
Query: 9   RLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNK 68
           RLP   +P  YD+ + P+LTS  F  S  I+V V   T+FI+L++ DL I N ++   ++
Sbjct: 68  RLPSVVIPLHYDLFVHPNLTSLDFVASEKIEVLVSNATQFIILHSKDLEITNATLQ--SE 125
Query: 69  VSSKALEP---TKVELVEADEILVLEFAETL-PTGMGVLAIGFEGVLNDKMKGFYRSSYE 124
             S+ ++P    KV    A E + L   E L P     +A+ F+  L D  +GFY+S+Y 
Sbjct: 126 EDSRYMKPGKELKVLSYPAHEQIALLVPEKLTPHLKYYVAMDFQAKLGDGFEGFYKSTYR 185
Query: 125 -LNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDE-KVD 182
            L GE + +AVT FEP  AR  FPC+DEP  KA F I +   S  +ALSNMP +   +++
Sbjct: 186 TLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSIKIRRESRHIALSNMPKVKTIELE 245
Query: 183 GNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVAVK 242
           G +    ++ +  MSTYLVA ++  F  +   TS G+KV +Y    K NQ  +AL  ++K
Sbjct: 246 GGLLEDHFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTHYALQASLK 305
Query: 243 TLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVA 302
            L+ Y++YF + Y L KLD+IAIPDFA GAMEN+GL+TYRET+LL+D + S+A++K  V 
Sbjct: 306 LLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWGLITYRETSLLFDPKTSSASDKLWVT 365
Query: 303 TVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGL 362
            V+AHELAHQWFGNLVTMEWW  +WLNEGFA ++  +A ++ +PE +    FL+ C E +
Sbjct: 366 RVIAHELAHQWFGNLVTMEWWNDIWLNEGFAKYMELIAVNATYPELQFDDYFLNVCFEVI 425
Query: 363 RLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKY 422
             D L  S PI        +I E+FD +SY KGA ++ ML+++LG E FQ+ +  Y+KK+
Sbjct: 426 TKDSLNSSRPISKPAETPTQIQEMFDEVSYNKGACILNMLKDFLGEEKFQKGIIQYLKKF 485
Query: 423 ACSNAKTEDLWAALEE---------------------------GSGEPVNKLMNSWTKQK 455
           +  NAK +DLW++L                             G    V ++M +WT QK
Sbjct: 486 SYRNAKNDDLWSSLSNSCLESDFTSGGVCHSDPKMTSNMLAFLGENAEVKEMMTTWTLQK 545
Query: 456 GYPVIXXXXXXXXXXXXXXXXXXXGSPGDGQ---------WIVPITLCCGSYDVCKNFLL 506
           G P++                       D +         W +P+T    S +V    +L
Sbjct: 546 GIPLLVVKQDGCSLRLQQERFLQGVFQEDPEWRALQERYLWHIPLTYSTSSSNVIHRHIL 605
Query: 507 YNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYD 548
            +K+D+ D+ E              W+K NV+  G+Y V Y+
Sbjct: 606 KSKTDTLDLPE-----------KTSWVKFNVDSNGYYIVHYE 636
>pdb|3SE6|A Chain A, Crystal Structure Of The Human Endoplasmic Reticulum Aminopeptidase 2 Length = 967 Back     alignment and structure
>pdb|4E36|A Chain A, Crystal Structure Of The Human Endoplasmic Reticulum Aminopeptidase 2 Variant N392k Length = 967 Back     alignment and structure
>pdb|4E36|A Chain A, Crystal Structure Of The Human Endoplasmic Reticulum Aminopeptidase 2 Variant N392k Length = 967 Back     alignment and structure
>pdb|3QNF|A Chain A, Crystal Structure Of The Open State Of Human Endoplasmic Reticulum Aminopeptidase 1 Erap1 Length = 954 Back     alignment and structure
>pdb|3QNF|A Chain A, Crystal Structure Of The Open State Of Human Endoplasmic Reticulum Aminopeptidase 1 Erap1 Length = 954 Back     alignment and structure
>pdb|2YD0|A Chain A, Crystal Structure Of The Soluble Domain Of Human Endoplasmic Reticulum Aminopeptidase 1 Erap1 Length = 897 Back     alignment and structure
>pdb|2YD0|A Chain A, Crystal Structure Of The Soluble Domain Of Human Endoplasmic Reticulum Aminopeptidase 1 Erap1 Length = 897 Back     alignment and structure
>pdb|3MDJ|A Chain A, Er Aminopeptidase, Erap1, Bound To The Zinc Aminopeptidase Inhibitor, Bestatin Length = 921 Back     alignment and structure
>pdb|3MDJ|A Chain A, Er Aminopeptidase, Erap1, Bound To The Zinc Aminopeptidase Inhibitor, Bestatin Length = 921 Back     alignment and structure
>pdb|4FYQ|A Chain A, Human Aminopeptidase N (Cd13) Length = 903 Back     alignment and structure
>pdb|4FYQ|A Chain A, Human Aminopeptidase N (Cd13) Length = 903 Back     alignment and structure
>pdb|4FKE|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Length = 909 Back     alignment and structure
>pdb|4FKE|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Length = 909 Back     alignment and structure
>pdb|4F5C|A Chain A, Crystal Structure Of The Spike Receptor Binding Domain Of A Porcine Respiratory Coronavirus In Complex With The Pig Aminopeptidase N Ectodomain Length = 959 Back     alignment and structure
>pdb|4F5C|A Chain A, Crystal Structure Of The Spike Receptor Binding Domain Of A Porcine Respiratory Coronavirus In Complex With The Pig Aminopeptidase N Ectodomain Length = 959 Back     alignment and structure
>pdb|4H5H|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed With Cleaved Poly-Alanine Length = 908 Back     alignment and structure
>pdb|4H5H|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed With Cleaved Poly-Alanine Length = 908 Back     alignment and structure
>pdb|4HOL|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed With Poly- Alanine Length = 908 Back     alignment and structure
>pdb|4HOL|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed With Poly- Alanine Length = 908 Back     alignment and structure
>pdb|3Q7J|A Chain A, Engineered Thermoplasma Acidophilum F3 Factor Mimics Human Aminopeptidase N (Apn) As A Target For Anticancer Drug Development Length = 780 Back     alignment and structure
>pdb|1Z1W|A Chain A, Crystal Structures Of The Tricorn Interacting Facor F3 From Thermoplasma Acidophilum, A Zinc Aminopeptidase In Three Different Conformations Length = 780 Back     alignment and structure
>pdb|3EBI|A Chain A, Structure Of The M1 Alanylaminopeptidase From Malaria Complexed With The Phosphinate Dipeptide Analog Length = 890 Back     alignment and structure
>pdb|3Q43|A Chain A, X-Ray Crystal Structure Of Pfa-M1 Bound To Bestatin Derivative 15 Length = 891 Back     alignment and structure
>pdb|3EBG|A Chain A, Structure Of The M1 Alanylaminopeptidase From Malaria Length = 889 Back     alignment and structure
>pdb|3T8V|A Chain A, A Bestatin-Based Chemical Biology Strategy Reveals Distinct Roles For Malaria M1- And M17-Family Aminopeptidases Length = 895 Back     alignment and structure
>pdb|3U9W|A Chain A, Structure Of Human Leukotriene A4 Hydrolase In Complex With Inhibitor Sc57461a Length = 608 Back     alignment and structure
>pdb|1HS6|A Chain A, Structure Of Leukotriene A4 Hydrolase Complexed With Bestatin. Length = 611 Back     alignment and structure
>pdb|2R59|A Chain A, Leukotriene A4 Hydrolase Complexed With Inhibitor Rb3041 Length = 616 Back     alignment and structure
>pdb|3CHO|A Chain A, Crystal Structure Of Leukotriene A4 Hydrolase In Complex With 2-Amino-N-[4-(Phenylmethoxy)phenyl]-Acetamide Length = 610 Back     alignment and structure
>pdb|1SQM|A Chain A, Structure Of [r563a] Leukotriene A4 Hydrolase Length = 610 Back     alignment and structure
>pdb|1GW6|A Chain A, Structure Of Leukotriene A4 Hydrolase D375n Mutant Length = 610 Back     alignment and structure
>pdb|1H19|A Chain A, Structure Of [e271q] Leukotriene A4 Hydrolase Length = 611 Back     alignment and structure
>pdb|3B7S|A Chain A, [e296q]lta4h In Complex With Rsr Substrate Length = 616 Back     alignment and structure
>pdb|2DQ6|A Chain A, Crystal Structure Of Aminopeptidase N From Escherichia Coli Length = 870 Back     alignment and structure
>pdb|2HPO|A Chain A, Structure Of Aminopeptidase N From E. Coli Suggests A Compartmentalized, Gated Active Site Length = 891 Back     alignment and structure
>pdb|3PUU|A Chain A, Crystal Structure Of Glu121gln Mutant Of E. Coli Aminopeptidase N Length = 891 Back     alignment and structure
>pdb|2XQ0|A Chain A, Structure Of Yeast Lta4 Hydrolase In Complex With Bestatin Length = 632 Back     alignment and structure
>pdb|2XPY|A Chain A, Structure Of Native Leukotriene A4 Hydrolase From Saccharomyces Cerevisiae Length = 632 Back     alignment and structure
>pdb|3CIA|A Chain A, Crystal Structure Of Cold-Aminopeptidase From Colwellia Psychrerythraea Length = 605 Back     alignment and structure
>pdb|2GTQ|A Chain A, Crystal Structure Of Aminopeptidase N From Human Pathogen Neisseria Meningitidis Length = 867 Back     alignment and structure
>pdb|3RJO|A Chain A, Crystal Structure Of Erap1 Peptide Binding Domain Length = 419 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query775
2xdt_A 897 Endoplasmic reticulum aminopeptidase 1; glycoprote 0.0
2xdt_A897 Endoplasmic reticulum aminopeptidase 1; glycoprote 3e-48
3se6_A 967 Endoplasmic reticulum aminopeptidase 2; thermolysi 0.0
3se6_A967 Endoplasmic reticulum aminopeptidase 2; thermolysi 7e-49
1z5h_A780 Tricorn protease interacting factor F3; zinc amino 0.0
1z5h_A780 Tricorn protease interacting factor F3; zinc amino 2e-50
2xq0_A632 LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: B 0.0
3b7s_A616 Leukotriene A-4 hydrolase; transition state, analo 0.0
3cia_A605 Cold-active aminopeptidase; psychrohilic, hydrolas 0.0
3ebh_A 889 PFA-M1, M1 family aminopeptidase; hydrolase, metal 1e-170
2gtq_A867 Aminopeptidase N; alanine aminopeptidase, M1 famil 1e-149
3b34_A891 Aminopeptidase N; protease, hydrolase, thermolysin 1e-143
3rjo_A419 Endoplasmic reticulum aminopeptidase 1; ERAP1, hyd 3e-51
3rjo_A 419 Endoplasmic reticulum aminopeptidase 1; ERAP1, hyd 3e-22
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-06
4fgm_A597 Aminopeptidase N family protein; structural genomi 3e-07
>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} Length = 967 Back     alignment and structure
>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} Length = 967 Back     alignment and structure
>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A* Length = 780 Back     alignment and structure
>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A* Length = 780 Back     alignment and structure
>2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A* Length = 632 Back     alignment and structure
>3b7s_A Leukotriene A-4 hydrolase; transition state, analogue peptide, hydrolysis, hydrolase, leukotriene biosynthesis, metal-binding, metalloprotease; 1.47A {Homo sapiens} SCOP: a.118.1.7 b.98.1.1 d.92.1.13 PDB: 3b7t_A 3b7r_L* 2r59_A* 3b7u_X* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* 3fu5_A* ... Length = 616 Back     alignment and structure
>3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea} Length = 605 Back     alignment and structure
>3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A* Length = 889 Back     alignment and structure
>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis} Length = 867 Back     alignment and structure
>3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A* Length = 891 Back     alignment and structure
>3rjo_A Endoplasmic reticulum aminopeptidase 1; ERAP1, hydrolase; 2.30A {Homo sapiens} Length = 419 Back     alignment and structure
>3rjo_A Endoplasmic reticulum aminopeptidase 1; ERAP1, hydrolase; 2.30A {Homo sapiens} Length = 419 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR} Length = 597 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query775
3se6_A967 Endoplasmic reticulum aminopeptidase 2; thermolysi 100.0
4fke_A909 Aminopeptidase N; zinc aminopeptidase, hydrolase; 100.0
2xdt_A897 Endoplasmic reticulum aminopeptidase 1; glycoprote 100.0
1z5h_A780 Tricorn protease interacting factor F3; zinc amino 100.0
2gtq_A867 Aminopeptidase N; alanine aminopeptidase, M1 famil 100.0
3ebh_A 889 PFA-M1, M1 family aminopeptidase; hydrolase, metal 100.0
3b34_A891 Aminopeptidase N; protease, hydrolase, thermolysin 100.0
3u9w_A608 Leukotriene A-4 hydrolase; hydrolase-hydrolase inh 100.0
3cia_A605 Cold-active aminopeptidase; psychrohilic, hydrolas 100.0
2xq0_A632 LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: B 100.0
3rjo_A419 Endoplasmic reticulum aminopeptidase 1; ERAP1, hyd 100.0
4fgm_A597 Aminopeptidase N family protein; structural genomi 99.96
>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} PDB: 4e36_A* Back     alignment and structure
Probab=100.00  E-value=2.7e-146  Score=1309.70  Aligned_cols=750  Identities=35%  Similarity=0.632  Sum_probs=677.0

Q ss_pred             CCCCCCCCCceeeEEEEEEEecCCCCeEEEEEEEEEEEECCCCEEEEEeCCceeeEeEeeeccCCCC--ccccCeeEEEe
Q 004076            5 KGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSS--KALEPTKVELV   82 (775)
Q Consensus         5 ~~~~rLp~~v~p~~Y~l~l~~~~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~v~~~~~~~~--~~~~~~~~~~~   82 (775)
                      ...+|||.+++|.||+|.|++|+++.+|+|+|+|++++.++++.|+||+.+|+|+++++.+..+...  .........++
T Consensus        64 ~~~~RLP~~v~P~hY~L~L~~~~~~~~f~G~v~I~~~~~~~t~~I~Lh~~~L~I~~v~v~~~~~~~~~~~~~~~~~~~~~  143 (967)
T 3se6_A           64 WQELRLPSVVIPLHYDLFVHPNLTSLDFVASEKIEVLVSNATQFIILHSKDLEITNATLQSEEDSRYMKPGKELKVLSYP  143 (967)
T ss_dssp             CCCSSCCTTEEEEEEEEEEEEETTTTEEEEEEEEEEEESSCCSEEEEECSSCEEEEEEEEECC---CCSSCEECEEEEEG
T ss_pred             cccccCCCCceEEEEEEEEEEeCCCCEEEEEEEEEEEEEcCCCEEEEECCCCEEEEEEEeccCCcccccccceeeeEEec
Confidence            4568999999999999999999999999999999999999999999999999999999864321100  01111222333


Q ss_pred             cCCeEEEEEeCCCcCCc-eEEEEEEEEeccCCCCcceEEEeecc-CCeeeeccccCCCCCCCCceeeccCCCCCeeEEEE
Q 004076           83 EADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYEL-NGEKKNMAVTQFEPADARRCFPCWDEPACKATFKI  160 (775)
Q Consensus        83 ~~~~~l~i~l~~~l~~g-~~~l~i~y~g~~~~~~~G~y~~~y~~-~g~~~~~~~t~~ep~~Ar~~fPc~DeP~~ka~f~l  160 (775)
                       ..+.+.|.++++|++| .|+|+|.|+|.+++++.|||++.|.+ +|+.+++++|||||++||+||||||||++||+|+|
T Consensus       144 -~~~~l~i~l~~~L~~g~~~~l~i~y~g~~~~~~~G~y~s~y~~~~g~~~~~~~Tq~ep~~AR~~FPC~DeP~~KAtf~i  222 (967)
T 3se6_A          144 -AHEQIALLVPEKLTPHLKYYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSI  222 (967)
T ss_dssp             -GGTEEEEECSSCCCTTCCEEEEEEEEEECBSSSSEEEEEEEECTTSCEEEEEEEECTTTTGGGTSCBCCSTTCCBEEEE
T ss_pred             -CCCEEEEEcCCccCCCCeEEEEEEEEEecCCCccceeeeeeEcCCCceEEEEEEecccCCCCeEEEecCCcCceeEEEE
Confidence             5678999999999999 89999999999999999999999976 78889999999999999999999999999999999


Q ss_pred             EEEECCCCeEeeCCCccce-eecCceEEEEEeeCCCCcceEEEEEEeeeeEEeecccCCeEEEEEEeCCccchHHHHHHH
Q 004076          161 TLDVPSELVALSNMPVIDE-KVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNV  239 (775)
Q Consensus       161 ~i~~p~~~~~isn~~~~~~-~~~~~~~~~~F~~t~~m~~yl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~~l~~  239 (775)
                      +|++|++|+|+|||++.++ ...+++++++|+.|+|||+||+||+||+|+.++..+.+|+++++|++|+..++++++++.
T Consensus       223 tI~~p~~~~alSN~~~~~~~~~~~g~~~~~F~~t~pmstYLva~~vg~f~~~~~~~~~gv~v~v~~~p~~~~~~~~al~~  302 (967)
T 3se6_A          223 KIRRESRHIALSNMPKVKTIELEGGLLEDHFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTHYALQA  302 (967)
T ss_dssp             EEEECTTCEEEESSCEEEEEECTTSCEEEEECCCCSBCGGGCCEEEECCEEEEEECTTCCEEEEEECGGGGGGGHHHHHH
T ss_pred             EEEECCCcEEEeCCCcccceecCCCeEEEEEecCCCccceeEEEEEeceEEEEeecCCCcEEEEEeCcchHHHHHHHHHH
Confidence            9999999999999998765 345678899999999999999999999999988666779999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCCCCccceeecCCCCCccccccccceeecccccccCCCCcHHHHHHHHHHHHHHHHHHhhcCccC
Q 004076          240 AVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVT  319 (775)
Q Consensus       240 ~~~~l~~~e~~~g~~yp~~k~d~v~~p~~~~g~mE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlVt  319 (775)
                      +.+++++||++||+|||++|+|+|++|+|+.||||||||++|++..+|++++.++...++.++.+||||+|||||||+||
T Consensus       303 ~~~~l~~~e~~fg~~YP~~k~d~v~vPdf~~GaMEn~Glity~e~~ll~d~~~s~~~~k~~~~~vIaHElAHqWFGnlVT  382 (967)
T 3se6_A          303 SLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWGLITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVT  382 (967)
T ss_dssp             HHHHHHHHHHHHTCCCCSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHGGGTBTTTEE
T ss_pred             HHHHHHHHHHhcCCCCCcccccEEEecCCCCcccccCCccccchhheecCcccCCHHhhHhHHHHHHHHHHHHHhcCccc
Confidence            99999999999999999999999999999999999999999999999999998888889999999999999999999999


Q ss_pred             cCccchhHHhhhHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhcccCCCCCeEeecCCcchhhhcccchhcchhhHHH
Q 004076          320 MEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVI  399 (775)
Q Consensus       320 ~~~w~d~WL~EGfA~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pi~~~~~~~~~~~~~f~~i~Y~Kg~~vl  399 (775)
                      |+||+|+|||||||+|++++++++.+|+|.+...++.+...++..|+..++||+..++.++.++...|+.++|.||++||
T Consensus       383 ~~wW~dlWLnEGFAty~e~~~~~~~~p~~~~~~~~~~~~~~al~~D~~~~~~Pi~~~v~~~~~i~~~Fd~i~Y~KGa~vL  462 (967)
T 3se6_A          383 MEWWNDIWLNEGFAKYMELIAVNATYPELQFDDYFLNVCFEVITKDSLNSSRPISKPAETPTQIQEMFDEVSYNKGACIL  462 (967)
T ss_dssp             ESSGGGTHHHHHHHHHHHHHHHHHHCGGGCHHHHHHHHHHHHHTTTTSTTCCCSSCCCCSHHHHHHTSSHHHHHHHHHHH
T ss_pred             cCCCccccHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHhhcccCCCCceeecCCHHHHHHhcchhhhhHHHHHH
Confidence            99999999999999999999999999999887777666557888999999999999999999999999999999999999


Q ss_pred             HHHHHhhCHHHHHHHHHHHHHHhccCCCCHHHHHHHHHhc---------------------------cCCCHHHHHHHhh
Q 004076          400 RMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEG---------------------------SGEPVNKLMNSWT  452 (775)
Q Consensus       400 ~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~---------------------------~g~~l~~~~~~W~  452 (775)
                      +||+..||++.|+++|+.|+++|+|++++++|||++++++                           +|.||++||++|+
T Consensus       463 ~mL~~~lG~e~F~~gLr~Yl~~~~~~nat~~Dl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~dv~~~m~~W~  542 (967)
T 3se6_A          463 NMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNSCLESDFTSGGVCHSDPKMTSNMLAFLGENAEVKEMMTTWT  542 (967)
T ss_dssp             HHHHHHHCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHCC-------------------------CCCCCCHHHHHHHHH
T ss_pred             HHHHHHhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhhhccccccccccccccccccccccccCCcCHHHHHHHHh
Confidence            9999999999999999999999999999999999999995                           6889999999999


Q ss_pred             cCCCcceEEEEEeCcEEEEEEEeeccCCCC---------CCCeEEEEEEEEeccccceeeeEeeccceEEEecccccccc
Q 004076          453 KQKGYPVISVKVKEEKLELEQSQFLSSGSP---------GDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSI  523 (775)
Q Consensus       453 ~~~g~P~~~v~~~~~~~~l~Q~rf~~~~~~---------~~~~w~iPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  523 (775)
                      .|+|||+|+|++++++++|+|+||+.++..         .+..|+|||+|.+++++....+|+..++.++.++.      
T Consensus       543 ~q~G~Pvl~V~~~~~~~~l~Q~rf~~~~~~~~~~~~~~~~~~~W~IPl~~~~~~~~~~~~~~l~~~~~~i~~~~------  616 (967)
T 3se6_A          543 LQKGIPLLVVKQDGCSLRLQQERFLQGVFQEDPEWRALQERYLWHIPLTYSTSSSNVIHRHILKSKTDTLDLPE------  616 (967)
T ss_dssp             HSCSCEEEEEEEETTEEEEEEEECCCC-----------CCSCCCCCCEEEEESSCCCCEEECCCSSEEEEECSS------
T ss_pred             cCCCCcEEEEEecCCEEEEEeeeecCCCCCCccccccccCCceEEEEEEEEeCCCCccceEEecCCceEEeccC------
Confidence            999999999999989999999999875422         23589999999987655555677776666666542      


Q ss_pred             cCCCCCCceEEEccCceEEEEEecchhhHH--------------------------------------------------
Q 004076          524 SKEGDNGGWIKLNVNQTGFYRVKYDKDLAA--------------------------------------------------  553 (775)
Q Consensus       524 ~~~~~~~~wi~~N~~~~gyyrV~Yd~~~w~--------------------------------------------------  553 (775)
                         .+  +||++|.++.||||||||+.+|.                                                  
T Consensus       617 ---~~--~wi~~N~~~~GyyRV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~~g~~~~~~~l~l~~~l~~E~  691 (967)
T 3se6_A          617 ---KT--SWVKFNVDSNGYYIVHYEGHGWDQLITQLNQNHTLLRPKDRVGLIHDVFQLVGAGRLTLDKALDMTYYLQHET  691 (967)
T ss_dssp             ---CC--SCEEESGGGCSSCEEEEETTHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHTTSSCHHHHHHHTTGGGTCC
T ss_pred             ---CC--ceEEEeCCccEEEEEecCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcCCC
Confidence               44  89999999999999999999999                                                  


Q ss_pred             ----------------------------------------------------HHHHHHhHHHHHHHHHhcCCHHHHHHHH
Q 004076          554 ----------------------------------------------------SHLDALLRGEIFTALALLGHKETLNEAS  581 (775)
Q Consensus       554 ----------------------------------------------------~~~~~~~R~~ll~~ac~~g~~~ci~~a~  581 (775)
                                                                          ++.+.++|..++.+||.+|+++|+++|.
T Consensus       692 ~~~~w~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lg~~~~~~~~~~~lR~~il~~ac~~g~~~c~~~A~  771 (967)
T 3se6_A          692 SSPALLEGLSYLESFYHMMDRRNISDISENLKRYLLQYFKPVIDRQSWSDKGSVWDRMLRSALLKLACDLNHAPCIQKAA  771 (967)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHTTHHHHHHCCSSCCSCHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence                                                                2345679999999999999999999999


Q ss_pred             HHHHHHhcCCCCCCCChhhHHHHHHHhhhhcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhcCCCcHHHHHHHHHHhcc
Q 004076          582 KRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLS  661 (775)
Q Consensus       582 ~~f~~~~~~~~~~~i~~~lr~~v~~~~~~~~~~g~~~~~~~l~~~y~~~~~~~ek~~ll~aL~~~~d~~~l~~~L~~~l~  661 (775)
                      ++|++|++++....||||+|..   +||.|+++  +++|++||++|+++++++||..++.||||++|+++|+++|+++++
T Consensus       772 ~~f~~~~~~~~~~~i~~~lr~~---Vyc~~~~~--~~~~~~l~~~y~~s~~~~ek~~ll~aL~ct~d~~ll~~~L~~~l~  846 (967)
T 3se6_A          772 ELFSQWMESSGKLNIPTDVLKI---VYSVGAQT--TAGWNYLLEQYELSMSSAEQNKILYALSTSKHQEKLLKLIELGME  846 (967)
T ss_dssp             HHHHHHHHTTTCSCCCHHHHHH---HHHHHTTS--HHHHHHHHHHHHHCSCHHHHHHHHHHHTTCCCHHHHHHHHHHHHH
T ss_pred             HHHHHhhcCCCcccCChhhhhH---hHhhhhcc--HHHHHHHHHHHhccCCHHHHHHHHHHhcCCCCHHHHHHHHHHHhC
Confidence            9999999875444699999994   55556653  899999999999999999999999999999999999999999998


Q ss_pred             C-cccccceeeeee-Eccc--cHHHHHHHHHHHHHHHHHHhCCC-cchhHHHHHhhccCCCHHHHHHHHHHhhcCCCc-h
Q 004076          662 S-EVRSQDAVYGLA-VSIE--GRETAWKWLKDNWDHISKTWGSG-FLITRFISSIVSPFASYEKVREVEEFFSSRCKP-Y  735 (775)
Q Consensus       662 ~-~ir~qd~~~~~~-v~~~--g~~~~w~fl~~n~~~i~~~~~~~-~~l~~~i~~~~~~~~t~~~~~~~~~Ff~~~~~~-~  735 (775)
                      + .||.||...++. |+.|  |+.++|+|+++||+.|.++|+.+ +.++++|..+++.|+|+++++++++||+.++.. .
T Consensus       847 ~~~i~~qd~~~~~~~v~~n~~g~~~~w~f~~~nw~~i~~~~~~~~~~~~~~i~~~~~~~~t~~~l~~~~~f~~~~~~~~~  926 (967)
T 3se6_A          847 GKVIKTQNLAALLHAIARRPKGQQLAWDFVRENWTHLLKKFDLGSYDIRMIISGTTAHFSSKDKLQEVKLFFESLEAQGS  926 (967)
T ss_dssp             CSSSCGGGHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHSCTTSHHHHHHHHTTTTTCCSHHHHHHHHHHHHHSCSSSC
T ss_pred             cCcCcHhHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhccCCHHHHHHHHHHHHhCCccch
Confidence            7 599999999999 8877  99999999999999999999854 678999999999999999999999999987654 3


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhhhcc
Q 004076          736 IARTLRQSIERVQINAKWVESIRNEGHLAEAVKELAYR  773 (775)
Q Consensus       736 ~~~~~~~~le~i~~ni~W~~~~~~~~~i~~wl~~~~~~  773 (775)
                      ..++++|++|+|+.|++|++++.+.  |.+||+.|.+|
T Consensus       927 ~~~~~~q~le~i~~ni~W~~~~~~~--i~~wl~~~~~~  962 (967)
T 3se6_A          927 HLDIFQTVLETITKNIKWLEKNLPT--LRTWLMVNTRH  962 (967)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHCC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhcccc
Confidence            5689999999999999999999988  99999998775
>4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A* Back     alignment and structure
>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A* Back     alignment and structure
>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis} Back     alignment and structure
>3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A* Back     alignment and structure
>3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A* Back     alignment and structure
>3u9w_A Leukotriene A-4 hydrolase; hydrolase-hydrolase inhibitor complex; HET: 28P; 1.25A {Homo sapiens} PDB: 3cho_A* 3chp_A* 3chq_A* 3chr_A* 3chs_A* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* ... Back     alignment and structure
>3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea} Back     alignment and structure
>2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A* Back     alignment and structure
>3rjo_A Endoplasmic reticulum aminopeptidase 1; ERAP1, hydrolase; 2.30A {Homo sapiens} Back     alignment and structure
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 775
d3b7sa3252 d.92.1.13 (A:209-460) Leukotriene A4 hydrolase cat 1e-49
d3b7sa2208 b.98.1.1 (A:1-208) Leukotriene A4 hydrolase N-term 2e-33
>d3b7sa3 d.92.1.13 (A:209-460) Leukotriene A4 hydrolase catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 252 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Leukotriene A4 hydrolase catalytic domain
domain: Leukotriene A4 hydrolase catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  172 bits (437), Expect = 1e-49
 Identities = 65/255 (25%), Positives = 110/255 (43%), Gaps = 19/255 (7%)

Query: 218 GIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENY 276
           G +  V+ +  +  +  +  +     L++ ++    PY   + D++ + P F  G MEN 
Sbjct: 7   GPRTLVWSEKEQVEKSAYEFSETESMLKIAEDLG-GPYVWGQYDLLVLPPSFPYGGMENP 65

Query: 277 GLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWV 336
            L     T L         A  + ++ V+AH+++H W GNLVT + W H WLNEG   ++
Sbjct: 66  CLTFVTPTLL---------AGDKSLSNVIAHQISHSWTGNLVTNKTWDHFWLNEGHTVYL 116

Query: 337 SYLAADSLFPEWKIWTQFLDECTE-GLRLDGLAESHPIEVEVNHTGEID--EIFDAISYR 393
                  LF E       L    E    +    E+HP    V    +ID    + ++ Y 
Sbjct: 117 ERHICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFTKLVVDLTDIDPDVAYSSVPYE 176

Query: 394 KGASVIRMLQNYLG-AECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKL----M 448
           KG +++  L+  LG  E F   L +Y++K++  +  T+D    L     + V+ L     
Sbjct: 177 KGFALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYFKDKVDVLNQVDW 236

Query: 449 NSWTKQKGYPVISVK 463
           N+W    G P I   
Sbjct: 237 NAWLYSPGLPPIKPN 251
>d3b7sa2 b.98.1.1 (A:1-208) Leukotriene A4 hydrolase N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 208 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query775
d3b7sa3252 Leukotriene A4 hydrolase catalytic domain {Human ( 100.0
d3b7sa2208 Leukotriene A4 hydrolase N-terminal domain {Human 100.0
d1u4ga_298 Elastase {Pseudomonas aeruginosa [TaxId: 287]} 86.23
d1bqba_301 Aureolysin {Staphylococcus aureus [TaxId: 1280]} 80.96
>d3b7sa3 d.92.1.13 (A:209-460) Leukotriene A4 hydrolase catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Leukotriene A4 hydrolase catalytic domain
domain: Leukotriene A4 hydrolase catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-50  Score=410.78  Aligned_cols=237  Identities=27%  Similarity=0.447  Sum_probs=205.1

Q ss_pred             CCeEEEEEEeCCccchHHHHHHHHHHHHHHHHHHhCCCCCCCccceeec-CCCCCccccccccceeecccccccCCCCcH
Q 004076          217 DGIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENYGLVTYRETALLYDDQHSAA  295 (775)
Q Consensus       217 ~g~~v~v~~~~~~~~~~~~~l~~~~~~l~~~e~~~g~~yp~~k~d~v~~-p~~~~g~mE~~gli~~~e~~ll~~~~~~~~  295 (775)
                      .|++|+||++|+..+.++++++.++++|++||++|| |||++|+|+|++ |++..|||||||++++++..++.+..    
T Consensus         6 ~g~~vrv~~~p~~~~~~~~~l~~~~~~l~~~e~~~g-~YP~~k~d~v~~~~~~~~ggmE~~~l~~~~~~~~~~~~~----   80 (252)
T d3b7sa3           6 IGPRTLVWSEKEQVEKSAYEFSETESMLKIAEDLGG-PYVWGQYDLLVLPPSFPYGGMENPCLTFVTPTLLAGDKS----   80 (252)
T ss_dssp             EETTEEEEECGGGHHHHHHHTTTHHHHHHHHHHHHC-CCCSSCCEEEECCTTCSSSEECCTTEEEECGGGCCSSST----
T ss_pred             cCCceEEEEccchHHHHHHHHHHHHHHHHHHHHhCC-CCCchhcCEEEeCCCccccccccceeeeecchhccccch----
Confidence            378999999999999999999999999999999999 999999999999 68889999999999999985443322    


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCccCcCccchhHHhhhHHHHHHHHHHhhhCCchhHHHHHHHHHH-HHhhhcccCCCCCeE
Q 004076          296 ANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECT-EGLRLDGLAESHPIE  374 (775)
Q Consensus       296 ~~~~~~~~~iaHElaHqWfGnlVt~~~w~d~WL~EGfA~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~pi~  374 (775)
                           +..+||||+|||||||+||++||+|+||+||||+|++.+++++.+|+............ .....|+....+|+.
T Consensus        81 -----~~~~iaHE~aHqWfG~~Vt~~~w~~~WL~EG~a~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (252)
T d3b7sa3          81 -----LSNVIAHQISHSWTGNLVTNKTWDHFWLNEGHTVYLERHICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFT  155 (252)
T ss_dssp             -----TTHHHHHHHHTTTBTTTEEESSGGGHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCGGG
T ss_pred             -----HHHHHHHHHHHHHHhhhceeccccchHhhccHHHHHHHHhhccccchhhhhhhhhhhhhhHHHHHhhhhccCCcc
Confidence                 45689999999999999999999999999999999999999999887654433333332 334556666777776


Q ss_pred             eecCCc--chhhhcccchhcchhhHHHHHHHHhhC-HHHHHHHHHHHHHHhccCCCCHHHHHHHHHhccCCCHHHH----
Q 004076          375 VEVNHT--GEIDEIFDAISYRKGASVIRMLQNYLG-AECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKL----  447 (775)
Q Consensus       375 ~~~~~~--~~~~~~f~~i~Y~Kg~~vl~mL~~~lG-~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~~g~~l~~~----  447 (775)
                      .++..+  .+.+..|+.++|.||++||+||+..|| ++.|+++||.|+++|++++++++||++++++++|.+++.+    
T Consensus       156 ~~~~~~~~~~~~~~f~~~~Y~Kga~vl~mL~~~iG~~~~f~~~lr~yl~~~~~~~~~~~df~~~l~~~~~~~~~~~~~~~  235 (252)
T d3b7sa3         156 KLVVDLTDIDPDVAYSSVPYEKGFALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYFKDKVDVLNQVD  235 (252)
T ss_dssp             SSSCCCTTCCHHHHCSSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHTGGGHHHHTTSC
T ss_pred             eeeccccccchhhcccceeecchhHHHHHHHHHhccHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhccccchhhHhH
Confidence            554333  234567999999999999999999999 6789999999999999999999999999999999999998    


Q ss_pred             HHHhhcCCCcceEEEE
Q 004076          448 MNSWTKQKGYPVISVK  463 (775)
Q Consensus       448 ~~~W~~~~g~P~~~v~  463 (775)
                      |++|++++|||+|+|+
T Consensus       236 f~~W~~~~G~P~l~v~  251 (252)
T d3b7sa3         236 WNAWLYSPGLPPIKPN  251 (252)
T ss_dssp             HHHHHHCCSSCSSCCC
T ss_pred             HHHHhcCCCCCeeecc
Confidence            9999999999999885
>d3b7sa2 b.98.1.1 (A:1-208) Leukotriene A4 hydrolase N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1u4ga_ d.92.1.2 (A:) Elastase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1bqba_ d.92.1.2 (A:) Aureolysin {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure