Citrus Sinensis ID: 004195
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 769 | 2.2.26 [Sep-21-2011] | |||||||
| Q8LFN2 | 802 | Probable inactive leucine | yes | no | 0.915 | 0.877 | 0.533 | 0.0 | |
| Q9M9S4 | 728 | Probable LRR receptor-lik | no | no | 0.854 | 0.902 | 0.340 | 1e-104 | |
| C0LGJ9 | 742 | Probable LRR receptor-lik | no | no | 0.863 | 0.894 | 0.344 | 1e-103 | |
| Q9LYN8 | 1192 | Leucine-rich repeat recep | no | no | 0.827 | 0.533 | 0.274 | 2e-53 | |
| Q9M0G7 | 1013 | Leucine-rich repeat recep | no | no | 0.780 | 0.592 | 0.285 | 5e-53 | |
| Q9FII5 | 1041 | Leucine-rich repeat recep | no | no | 0.828 | 0.611 | 0.264 | 1e-48 | |
| C0LGQ5 | 1249 | LRR receptor-like serine/ | no | no | 0.780 | 0.480 | 0.261 | 2e-44 | |
| P47735 | 999 | Receptor-like protein kin | no | no | 0.772 | 0.594 | 0.263 | 4e-44 | |
| Q9FIZ3 | 1252 | LRR receptor-like serine/ | no | no | 0.776 | 0.476 | 0.248 | 6e-44 | |
| Q8L899 | 1207 | Systemin receptor SR160 O | N/A | no | 0.837 | 0.533 | 0.264 | 8e-44 |
| >sp|Q8LFN2|Y3037_ARATH Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 OS=Arabidopsis thaliana GN=At3g03770 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 706 bits (1822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/724 (53%), Positives = 514/724 (70%), Gaps = 20/724 (2%)
Query: 45 YPSVSSSFNTTTVTDFCNIEPTPSLTLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTF 104
YP V +S+N TDFCN EP+PSLT+VCYED++TQLHI GDN ++ L +FS ++F
Sbjct: 43 YPKVLNSWNN--YTDFCNSEPSPSLTVVCYEDSVTQLHIIGDNGTHM---LPKSFSINSF 97
Query: 105 FSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQT 164
+TL L +KVL+ VSLGLWG LP I SSLEILN+SSN+L G IP ++SSL LQT
Sbjct: 98 VTTLVKLPDVKVLTFVSLGLWGWLPQKINRLSSLEILNVSSNFLFGPIPHELSSLATLQT 157
Query: 165 LILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEI 224
LILD+N F+G +P + L L+VLSL+ N L+G LP SL+ L LRV++L+ N +G +
Sbjct: 158 LILDENMFSGELPDWIDSLPSLAVLSLRKNVLNGSLPSSLSSLSGLRVLALANNRFNGAL 217
Query: 225 PDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDI 284
PDL +L NL+V D++ N FGP FPRL K+VTL+L N+F+ ++ +E+ S QLQ LD+
Sbjct: 218 PDLSHLTNLQVLDLEGNSFGPLFPRLSNKLVTLILSKNKFRSAVSAEEVSSLYQLQHLDL 277
Query: 285 SLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSC 344
S N FVGPF SL+SLP+ITYL+I NKLTG L N+SCN QL FVD+SSNLLTG LP+C
Sbjct: 278 SYNTFVGPFPTSLMSLPAITYLNISHNKLTGRLSANLSCNSQLMFVDMSSNLLTGSLPTC 337
Query: 345 LQVEAKT-RLVLYSKNCLSNEEQEQHPSNFCQNEALAVKVLPHKQKNKSSYASSVVGGTV 403
L+ + T R V+Y+ NCL+ ++Q P +FC NEALAV +LP + +NK S +G T
Sbjct: 338 LKPSSGTSRDVVYASNCLATTNEDQRPVSFCSNEALAVGILPQR-RNKVSKVGIALGVTA 396
Query: 404 G---GIAVVGAVLLVVKKVYNKNNNKVETTSTRFILENVSTINTVKLLSDARYISETMKM 460
+ + GA+ +V++++ K V +S R I EN S T KLLSDARYIS+TMK+
Sbjct: 397 SILGVLLLAGALFVVLRRLNAKKT--VTKSSPRLIRENASMGYTSKLLSDARYISQTMKL 454
Query: 461 GA-SLPAYRTFTLDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSS 519
G LPAYRTF+L+EL+ AT+ F+SS+FM + S GQIY+G+L DG+ VAIR LKM K S
Sbjct: 455 GGLGLPAYRTFSLEELEYATNNFESSAFMGEGSQGQIYRGRLKDGSFVAIRCLKMKKSCS 514
Query: 520 PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGP-- 577
+HIELI+KLRH +LVS LGHC + LDD ++S ++ +FEY PN LR++IS
Sbjct: 515 TQNLMHHIELIAKLRHRHLVSVLGHCFECYLDDSTVSRMFFVFEYVPNGELRTWISDGHM 574
Query: 578 GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637
G LTW QRI+ AI + KG+QFLHTGIVPGV+ NNLK+TD+LLD N K++SYNLPLL
Sbjct: 575 GRLLTWEQRISVAIGVAKGIQFLHTGIVPGVYDNNLKMTDILLDNNLAAKLSSYNLPLLV 634
Query: 638 EARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDL 696
E GK G S K T + + +DK D+YD G+IL+E+IVGRP+ +++ V ++K+
Sbjct: 635 EGLGKVGQVGSRSGPKGTPSI---KDEDKIDIYDFGVILLELIVGRPLRAKSQVDVLKEQ 691
Query: 697 LQVNIGTDE-ARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755
LQ +I D+ AR+S+VDP V CSD+SLK MME+C+RCL +P +RPS+ED LWNLQFA
Sbjct: 692 LQASISADDGARRSMVDPTVHRACSDQSLKTMMEICVRCLLKDPLERPSIEDVLWNLQFA 751
Query: 756 TQIQ 759
+Q+Q
Sbjct: 752 SQVQ 755
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Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9M9S4|Y1143_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g14390 OS=Arabidopsis thaliana GN=At1g14390 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 379 bits (972), Expect = e-104, Method: Compositional matrix adjust.
Identities = 260/763 (34%), Positives = 402/763 (52%), Gaps = 106/763 (13%)
Query: 26 NQLQLFQYQTLVRIQQLLNYPSVSSSFNTTTVTDFCNIEPTPSLTLVCYEDNLTQLHIAG 85
+QL + +TL+ IQ+ L YP S+ + T+FC + +PS ++C+ ++T+L + G
Sbjct: 27 SQLISSESRTLLEIQKHLQYPPTLRSW--SNWTNFCYLPSSPSFKILCFNGHVTELTVTG 84
Query: 86 DNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSS 145
+ + G FS+D+ F+ L LS+LK LSLVSLG+ GPLP I SS S
Sbjct: 85 NRTVKLPG----RFSSDSLFTVLTKLSNLKTLSLVSLGISGPLPSQIIRLSSSLQSLNLS 140
Query: 146 N-YLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSL 204
+ ++SG+IP +ISSL+NL++L+L +N F G+VP L
Sbjct: 141 SNFISGNIPKEISSLKNLRSLVLANNLFNGSVP-------------------------DL 175
Query: 205 TGLQSLRVVSLSANHLSGE-IPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNR 263
GL +L+ ++L N L E +P L + NL +++N FG + P KK+
Sbjct: 176 RGLSNLQELNLGGNKLGPEVVPSLAS--NLITISLKNNSFGSKIPEQIKKL--------- 224
Query: 264 FQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSC 323
N+LQ LD+S N+F G LLSLPS+ L + N L+G L + C
Sbjct: 225 -------------NKLQSLDLSSNKFTGSIPRFLLSLPSLQNLSLAQNLLSGSLPNSSLC 271
Query: 324 NPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCL----SNEEQEQHPSNFCQNEA- 378
N +L +D+S NLLTG LPSC + +T ++L++ NCL S + Q P FC+NEA
Sbjct: 272 NSKLRILDVSRNLLTGKLPSCFSSKKQT-VLLFTFNCLSINGSPSAKYQRPVTFCENEAK 330
Query: 379 LAVKVLPHKQKNKSSYASSV-----------VGGTVGGIAVVGAVLLVVKKVYNKNN--- 424
AV + K+K +G + + G VL+ ++K +K
Sbjct: 331 QAVAAVKSDTKDKERKEEDTGIELGLVIGIIIGVILVSAVLAGLVLVRMRKSRSKEEPLE 390
Query: 425 -NKVETTSTRFILENVSTINTVKLLSDARYISETMKMGA-SLPAYRTFTLDELKEATDCF 482
N V+ + + N + T K + D R + +TM+ L YR F+L+EL+EAT+ F
Sbjct: 391 ANNVDQVT---VCSNTTRSTTSKTVPDLRRVPQTMRSAVIGLSPYRVFSLEELEEATNNF 447
Query: 483 DSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSAL 542
D+ + + Q+YKG L +G V +R +K+ +K+S +E++SKLRH +LVS L
Sbjct: 448 DAENLCGE----QLYKGCLREGIAVTVRCIKLKQKNSTQNLAQQMEVLSKLRHMHLVSVL 503
Query: 543 GHCLDFSLDDP--SISIIYLIFEYAPNETLRSFISGPGYK--LTWVQRIAAAIAIVKGVQ 598
GHC+ D + S I+++ EY N +LR +++ K L W QR++ AI + +G+Q
Sbjct: 504 GHCIGTYQDHHPYAGSTIFIVQEYISNGSLRDYLTDWRKKEVLKWPQRMSIAIGVARGIQ 563
Query: 599 FLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLA 658
FLHTG+ PG+F NNL+I +VLLDE VK++ Y++PL P+K +
Sbjct: 564 FLHTGVAPGIFGNNLEIENVLLDETLTVKLSGYSIPL--------------PSKVGAESP 609
Query: 659 RTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEAR--KSIVDPAVM 716
E +K DVY G+ILI+II G+ I + + + L N DE +S+ DP V
Sbjct: 610 SNEDGEKEDVYQFGVILIQIITGKVIAAASSELGSLKLQLENSLRDEPSVLRSLADPCVR 669
Query: 717 NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759
+ ESL+ +E + CL + + RPS+ED +WNLQ+ Q+Q
Sbjct: 670 GTYAYESLRTTVEFAINCLCEDQRKRPSIEDVVWNLQYTIQVQ 712
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGJ9|Y2278_ARATH Probable LRR receptor-like serine/threonine-protein kinase At2g02780 OS=Arabidopsis thaliana GN=At2g02780 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 376 bits (966), Expect = e-103, Method: Compositional matrix adjust.
Identities = 264/767 (34%), Positives = 408/767 (53%), Gaps = 103/767 (13%)
Query: 26 NQLQLFQYQTLVRIQQLLNYPSVSSSFNTTTVTDFCNIEPTPSLTLVCYEDNLTQLHIAG 85
+Q+ + QTL+ IQ+ L YP V S+ T T+FC+I P+PSL ++C ++T+L + G
Sbjct: 27 SQVASSESQTLLEIQKQLQYPQVLQSW--TDTTNFCHIRPSPSLRIICLHGHVTELTVTG 84
Query: 86 DNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAH--SSSLEILNL 143
+ + ++G S F+ L LSSLK LSL SLG+ G L I S SLE LNL
Sbjct: 85 NRTSKLSG------SFHKLFTLLTQLSSLKTLSLTSLGISGSLSPKIITKLSPSLESLNL 138
Query: 144 SSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVS 203
SSN++S G +P E+ L+ L L L++N GF+
Sbjct: 139 SSNFIS------------------------GKIPEEIVSLKNLKSLVLRDNMFWGFVS-- 172
Query: 204 LTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNR 263
DLR L NL+ D+ N GP P L K+ T+ L+NN
Sbjct: 173 ---------------------DDLRGLSNLQELDLGGNKLGPEVPSLPSKLTTVSLKNNS 211
Query: 264 FQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSC 323
F+ + P++++ N LQ LD+S N F G L S+PS+ L + N L+G L +
Sbjct: 212 FRSKI-PEQIKKLNNLQSLDLSSNEFTGSIPEFLFSIPSLQILSLDQNLLSGSLPNSSCT 270
Query: 324 NPQLAFVDLSSNLLTGYLPSCLQVEA-KTRLVLYSKNCLS----NEEQEQHPSNFCQNEA 378
+ ++ +D+S NLLTG LPSC ++ + VL+S NCLS + Q P +FCQN+A
Sbjct: 271 SSKIITLDVSHNLLTGKLPSCYSSKSFSNQTVLFSFNCLSLIGTPNAKYQRPLSFCQNQA 330
Query: 379 ---LAVKVLPHKQKNKSS-------YASSVVGGTVGGIAVVGAVLLVVKKVYNK------ 422
+AV+ +P K K+K S ++G + +V VL+ +K+ ++
Sbjct: 331 SKAIAVEPIP-KAKDKDSARIKLGLVILIIIGVIILAAILVLLVLIALKRRRSRSEDDPF 389
Query: 423 --NNNKVETTSTRFILENVSTINTVKLLSDARYISETMKMGA-SLPAYRTFTLDELKEAT 479
NN+ E ++ + +T + K L D+R + +TM+ LP YR F+L+EL+EAT
Sbjct: 390 EVNNSNNERHASDKVSVCSTTTASSKSLPDSRRVPQTMRSAVIGLPPYRVFSLEELEEAT 449
Query: 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLV 539
+ FD++S C+ Q+Y+G L +G V +R +K+ +KS P +E++SKLRH +LV
Sbjct: 450 NDFDAASLFCE----QLYRGCLREGIPVTVRVIKLKQKSLPQSLAQQMEVLSKLRHMHLV 505
Query: 540 SALGHCLDFSLD--DPSISIIYLIFEYAPNETLRSFISGPGYK--LTWVQRIAAAIAIVK 595
S LGH + + D + I+++ EY + +LR F++ K L W QR+A AI + +
Sbjct: 506 SVLGHSIASNQDHNQHAGHTIFIVQEYISSGSLRDFLTNCRKKEVLKWPQRMAIAIGVAR 565
Query: 596 GVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTS 655
G+QFLH G+ PG+F NNLKI +++LDE VKI+ Y +PL ++ E AKK
Sbjct: 566 GIQFLHMGVAPGIFGNNLKIENIMLDETLTVKISGYTIPLPSKV-----GEERPQAKK-- 618
Query: 656 VLARTEQD-DKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEAR--KSIVD 712
R+ +D +K DVY G+IL++II G+ + + + + L N DE S+ D
Sbjct: 619 --PRSNEDREKEDVYQFGVILLQIITGKVVAAGSSEMGSLKLQLENGLRDEPSVLSSLAD 676
Query: 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759
P+V + ESL+ +E + CL + RPS+ED +WNLQ+ Q+Q
Sbjct: 677 PSVKGSYAYESLRTTVEFAINCLCEDQSKRPSIEDVVWNLQYTIQVQ 723
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LYN8|EXS_ARATH Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1 | Back alignment and function description |
|---|
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 202/735 (27%), Positives = 334/735 (45%), Gaps = 99/735 (13%)
Query: 95 LAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPV 154
L+ N T +G L+SL VL+L + G +P + +SL L+L SN L G IP
Sbjct: 479 LSDNQLTGEIPREIGKLTSLSVLNLNANMFQGKIPVELGDCTSLTTLDLGSNNLQGQIPD 538
Query: 155 QISSLRNLQTLILDDNKFTGAVPS------------ELSLLQVLSVLSLKNNSLSGFLPV 202
+I++L LQ L+L N +G++PS +LS LQ + L N LSG +P
Sbjct: 539 KITALAQLQCLVLSYNNLSGSIPSKPSAYFHQIEMPDLSFLQHHGIFDLSYNRLSGPIPE 598
Query: 203 SLTGLQSLRVVSLSANHLSGEIP-DLRNLKNLRVFDVQDNYFGPRFPRLHK---KMVTLV 258
L L +SLS NHLSGEIP L L NL + D+ N P+ K+ L
Sbjct: 599 ELGECLVLVEISLSNNHLSGEIPASLSRLTNLTILDLSGNALTGSIPKEMGNSLKLQGLN 658
Query: 259 LRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLL 318
L NN+ G P+ L KL+++ N+ GP SL +L +T++D+ N L+G L
Sbjct: 659 LANNQLN-GHIPESFGLLGSLVKLNLTKNKLDGPVPASLGNLKELTHMDLSFNNLSGELS 717
Query: 319 QNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSNE-------------- 364
+S +L + + N TG +PS L + + S+N LS E
Sbjct: 718 SELSTMEKLVGLYIEQNKFTGEIPSELGNLTQLEYLDVSENLLSGEIPTKICGLPNLEFL 777
Query: 365 -------EQEQHPSNFCQ---------NEALAVKVLPHKQKNKSSYASSVVG--GTVGGI 406
E CQ N+ L +V+ K + + S G G + G
Sbjct: 778 NLAKNNLRGEVPSDGVCQDPSKALLSGNKELCGRVVGSDCKIEGTKLRSAWGIAGLMLGF 837
Query: 407 AVVGAVLL-------VVKKVYNKNN-NKVETTSTR-FILENVSTINTVKLLSDARYISET 457
++ V + + K+V +++ ++E + + F+ +N + LS +R E
Sbjct: 838 TIIVFVFVFSLRRWAMTKRVKQRDDPERMEESRLKGFVDQN------LYFLSGSRS-REP 890
Query: 458 MKMGASL---PAYRTFTLDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKM 514
+ + ++ P + L ++ EATD F + + D G +YK L VA++ L
Sbjct: 891 LSINIAMFEQPLLKV-RLGDIVEATDHFSKKNIIGDGGFGTVYKACLPGEKTVAVKKLSE 949
Query: 515 SKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFI 574
+K + +E + K++H NLVS LG+C FS + L++EY N +L ++
Sbjct: 950 AKTQGNREFMAEMETLGKVKHPNLVSLLGYC-SFSEEK------LLVYEYMVNGSLDHWL 1002
Query: 575 ---SGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSY 631
+G L W +R+ A+ +G+ FLH G +P + ++K +++LLD +F K+ +
Sbjct: 1003 RNQTGMLEVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDIKASNILLDGDFEPKVADF 1062
Query: 632 NLPLLAEARGK-------GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPI 684
L L A G+ P S A T K DVY G+IL+E++ G+
Sbjct: 1063 GLARLISACESHVSTVIAGTFGYIPPEYGQSARATT----KGDVYSFGVILLELVTGKEP 1118
Query: 685 T------SENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNE 738
T SE ++ + ++N G ++DP +++ S R++++ + CL+
Sbjct: 1119 TGPDFKESEGGNLVGWAIQKINQGK---AVDVIDPLLVSVALKNSQLRLLQIAMLCLAET 1175
Query: 739 PKDRPSVEDTLWNLQ 753
P RP++ D L L+
Sbjct: 1176 PAKRPNMLDVLKALK 1190
|
Receptor with a serine/threonine-protein kinase activity required for the specification of the correct number of male archesporial initials and for the subsequent specification of tapetal and middle cell layer identities. In seeds, required for enhancing cell size and the rate of embryonic development. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9M0G7|PXL2_ARATH Leucine-rich repeat receptor-like protein kinase PXL2 OS=Arabidopsis thaliana GN=PXL2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 209 bits (533), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 197/690 (28%), Positives = 315/690 (45%), Gaps = 90/690 (13%)
Query: 107 TLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLI 166
+ SL+ L+VL L + L G LP + +S L+ L++SSN SG IP + + NL LI
Sbjct: 327 AISSLAQLQVLELWNNTLSGELPSDLGKNSPLQWLDVSSNSFSGEIPSTLCNKGNLTKLI 386
Query: 167 LDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIP- 225
L +N FTG +P+ LS Q L + ++NN L+G +P+ L+ L+ + L+ N LSG IP
Sbjct: 387 LFNNTFTGQIPATLSTCQSLVRVRMQNNLLNGSIPIGFGKLEKLQRLELAGNRLSGGIPG 446
Query: 226 DLRNLKNLRVFDVQDNYFGPRFPR----LHKKMVTLVLRNNRFQFGLNPDELRSYNQLQK 281
D+ + +L D N P +H LV N F G PD+ + L
Sbjct: 447 DISDSVSLSFIDFSRNQIRSSLPSTILSIHNLQAFLVADN--FISGEVPDQFQDCPSLSN 504
Query: 282 LDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYL 341
LD+S N G S+ S + L++ N LTG + + ++ LA +DLS+N LTG L
Sbjct: 505 LDLSSNTLTGTIPSSIASCEKLVSLNLRNNNLTGEIPRQITTMSALAVLDLSNNSLTGVL 564
Query: 342 PSCLQVEAKTRLVLYSKNCLSNEE------QEQHPSNFCQNEALAVKVLP---HKQKNKS 392
P + L+ S N L+ + +P + N L VLP Q+ S
Sbjct: 565 PESIGTSPALELLNVSYNKLTGPVPINGFLKTINPDDLRGNSGLCGGVLPPCSKFQRATS 624
Query: 393 SYAS----SVVGGTVGGIAVV---GAVLLVVKKVYNKNNNKVETTSTRFILENVSTINTV 445
S++S +V G + GIA V G + +V + +Y K
Sbjct: 625 SHSSLHGKRIVAGWLIGIASVLALGILTIVTRTLYKK----------------------- 661
Query: 446 KLLSDARYISETMKMGASLPAYRTFTLDELK-EATD---CFDSSSFMCDASHGQIYKGKL 501
S+ ET G +R L A+D C S+ + + G +YK ++
Sbjct: 662 -WYSNGFCGDETASKGEW--PWRLMAFHRLGFTASDILACIKESNMIGMGATGIVYKAEM 718
Query: 502 T-DGTLVAIRSLKMS----KKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556
+ T++A++ L S + + + + L+ KLRH N+V LG F +D ++
Sbjct: 719 SRSSTVLAVKKLWRSAADIEDGTTGDFVGEVNLLGKLRHRNIVRLLG----FLYNDKNMM 774
Query: 557 IIYLIFEYAPNETLRSFISGPGYK----LTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNN 612
I+Y E+ N L I G + WV R A+ + G+ +LH P V +
Sbjct: 775 IVY---EFMLNGNLGDAIHGKNAAGRLLVDWVSRYNIALGVAHGLAYLHHDCHPPVIHRD 831
Query: 613 LKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLA-----RTEQDDKSD 667
+K ++LLD N +I + LA + VS A +A + D+K D
Sbjct: 832 IKSNNILLDANLDARIADFG---LARMMARKKETVSMVAGSYGYIAPEYGYTLKVDEKID 888
Query: 668 VYDIGIILIEIIVG-RPITSE-----NVVVLVKDLLQVNIGTDEARKSIVDPAVMNECS- 720
+Y G++L+E++ G RP+ E ++V V+ ++ NI +EA +DP V N C
Sbjct: 889 IYSYGVVLLELLTGRRPLEPEFGESVDIVEWVRRKIRDNISLEEA----LDPNVGN-CRY 943
Query: 721 -DESLKRMMELCLRCLSNEPKDRPSVEDTL 749
E + ++++ L C + PKDRPS+ D +
Sbjct: 944 VQEEMLLVLQIALLCTTKLPKDRPSMRDVI 973
|
Involved in the regulation of procambium maintenance and polarity during vascular-tissue development. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9FII5|TDR_ARATH Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana GN=TDR PE=1 SV=1 | Back alignment and function description |
|---|
Score = 195 bits (496), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 198/748 (26%), Positives = 313/748 (41%), Gaps = 111/748 (14%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSS 136
NL L + ++N ++G + FST L +L LSL+S L G +P I
Sbjct: 295 NLKSLKLLDFSSNQLSGSIPSGFST---------LKNLTWLSLISNNLSGEVPEGIGELP 345
Query: 137 SLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSL 196
L L L +N +G +P ++ S L+T+ + +N FTG +PS L L L L +N
Sbjct: 346 ELTTLFLWNNNFTGVLPHKLGSNGKLETMDVSNNSFTGTIPSSLCHGNKLYKLILFSNMF 405
Query: 197 SGFLPVSLTGLQSLRVVSLSANHLSGEIP-DLRNLKNLRVFDVQDNYFGPRFPRLHKK-- 253
G LP SLT +SL N L+G IP +L+NL D+ +N F + P
Sbjct: 406 EGELPKSLTRCESLWRFRSQNNRLNGTIPIGFGSLRNLTFVDLSNNRFTDQIPADFATAP 465
Query: 254 -MVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNK 312
+ L L N F L P+ + LQ S + +G IP+ + S +++ GN
Sbjct: 466 VLQYLNLSTNFFHRKL-PENIWKAPNLQIFSASFSNLIGE-IPNYVGCKSFYRIELQGNS 523
Query: 313 LTG-----------LLLQNMSCN-------------PQLAFVDLSSNLLTGYLPSCLQVE 348
L G LL N+S N P +A VDLS NLLTG +PS
Sbjct: 524 LNGTIPWDIGHCEKLLCLNLSQNHLNGIIPWEISTLPSIADVDLSHNLLTGTIPSDFGSS 583
Query: 349 AKTRLVLYSKNCL-----SNEEQEQHPSNFCQNEALAVKVLP------------------ 385
S N L S +PS F NE L ++
Sbjct: 584 KTITTFNVSYNQLIGPIPSGSFAHLNPSFFSSNEGLCGDLVGKPCNSDRFNAGNADIDGH 643
Query: 386 HKQKNKSSYASSVVGGTVGGIAVVGAVLLVVKKVYNKN-NNKVETTSTRFILENVSTINT 444
HK++ A ++V I V VL+ + + K+ N+V+ +
Sbjct: 644 HKEERPKKTAGAIVWILAAAIGVGFFVLVAATRCFQKSYGNRVDGGGRNGGDIGPWKLTA 703
Query: 445 VKLLSDARYISETMKMGASLPAYRTFTLDELKEATDCFDSSSFMCDASHGQIYKGKLTDG 504
+ L+ FT D++ E D+ M S G +YK ++ +G
Sbjct: 704 FQRLN--------------------FTADDVVECLSKTDNILGM--GSTGTVYKAEMPNG 741
Query: 505 TLVAIRSLKMSKKSSPHMYTY------HIELISKLRHSNLVSALGHCLDFSLDDPSISII 558
++A++ L K + + ++++ +RH N+V LG C +
Sbjct: 742 EIIAVKKLWGKNKENGKIRRRKSGVLAEVDVLGNVRHRNIVRLLGCCTN-------RDCT 794
Query: 559 YLIFEYAPNETLRSFISGPGYKLT----WVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLK 614
L++EY PN +L + G +T W AI + +G+ +LH P + +LK
Sbjct: 795 MLLYEYMPNGSLDDLLHGGDKTMTAAAEWTALYQIAIGVAQGICYLHHDCDPVIVHRDLK 854
Query: 615 ITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQ-DDKSDVYDIGI 673
+++LLD +F ++ + + L + S S A T Q D KSD+Y G+
Sbjct: 855 PSNILLDADFEARVADFGVAKLIQTDESMSVVAGSYGYIAPEYAYTLQVDKKSDIYSYGV 914
Query: 674 ILIEIIVGR----PITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECS--DESLKRM 727
IL+EII G+ P E ++ D ++ + T E + ++D ++ CS E +K+M
Sbjct: 915 ILLEIITGKRSVEPEFGEGNSIV--DWVRSKLKTKEDVEEVLDKSMGRSCSLIREEMKQM 972
Query: 728 MELCLRCLSNEPKDRPSVEDTLWNLQFA 755
+ + L C S P DRP + D L LQ A
Sbjct: 973 LRIALLCTSRSPTDRPPMRDVLLILQEA 1000
|
Acts with CLE41p and CLE44p peptides as a ligand-receptor pair in a signal transduction pathway involved in the regulation of procambium maintenance and polarity during vascular-tissue development. Mediates repression of tracheary element differentiation and the promotion of procambial cells formation and polar division adjacent to phloem cells in the veins. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGQ5|GSO1_ARATH LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 175/670 (26%), Positives = 310/670 (46%), Gaps = 70/670 (10%)
Query: 108 LGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLIL 167
LG+ +L L L L G +P ++ L +L++SSN L+G+IP+Q+ + L + L
Sbjct: 595 LGNSQNLDRLRLGKNQLTGKIPWTLGKIRELSLLDMSSNALTGTIPLQLVLCKKLTHIDL 654
Query: 168 DDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIP-D 226
++N +G +P L L L L L +N LP L L V+SL N L+G IP +
Sbjct: 655 NNNFLSGPIPPWLGKLSQLGELKLSSNQFVESLPTELFNCTKLLVLSLDGNSLNGSIPQE 714
Query: 227 LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLV-LRNNRFQF-GLNPDELRSYNQLQK-LD 283
+ NL L V ++ N F P+ K+ L LR +R G P E+ LQ LD
Sbjct: 715 IGNLGALNVLNLDKNQFSGSLPQAMGKLSKLYELRLSRNSLTGEIPVEIGQLQDLQSALD 774
Query: 284 ISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPS 343
+S N F G ++ +L + LD+ N+LTG + ++ L ++++S N L G L
Sbjct: 775 LSYNNFTGDIPSTIGTLSKLETLDLSHNQLTGEVPGSVGDMKSLGYLNVSFNNLGGKLKK 834
Query: 344 CLQVEAKTRLVLYSKNCLSNEEQEQHPSNFCQNEALAVKVLPHKQKNKSSYASSVVGGTV 403
+ + C S P + C +V + ++ S S V+ +
Sbjct: 835 QFSRWPADSFLGNTGLCGS-------PLSRCN------RVRSNNKQQGLSARSVVIISAI 881
Query: 404 GGIAVVGAVLLVVKKVYNKNNN---KVETTSTRFILENVSTINTVKLLSDARYISETMKM 460
+ +G ++LV+ + + ++ KV ST + + S+ T K L +
Sbjct: 882 SALTAIGLMILVIALFFKQRHDFFKKVGHGSTAYTSSSSSSQATHKPL---------FRN 932
Query: 461 GASLPAYRTFTLDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSL-----KMS 515
GAS R +++ EAT + G++YK +L +G VA++ + MS
Sbjct: 933 GASKSDIR---WEDIMEATHNLSEEFMIGSGGSGKVYKAELENGETVAVKKILWKDDLMS 989
Query: 516 KKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFI- 574
KS ++ ++ + ++RH +LV +G+C S + LI+EY N ++ ++
Sbjct: 990 NKS----FSREVKTLGRIRHRHLVKLMGYC-----SSKSEGLNLLIYEYMKNGSIWDWLH 1040
Query: 575 -SGPGYK-----LTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKI 628
P + L W R+ A+ + +GV++LH VP + ++K ++VLLD N +
Sbjct: 1041 EDKPVLEKKKKLLDWEARLRIAVGLAQGVEYLHHDCVPPIVHRDIKSSNVLLDSNMEAHL 1100
Query: 629 NSYNLP-LLAEARGKGSAEVSSPAKKTSVLA-----RTEQDDKSDVYDIGIILIEIIVGR 682
+ L +L E + + A +A + +KSDVY +GI+L+EI+ G+
Sbjct: 1101 GDFGLAKVLTENCDTNTDSNTWFACSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGK 1160
Query: 683 PITSE------NVVVLVKDLLQVNIGTDEARKSIVDPAV--MNECSDESLKRMMELCLRC 734
T ++V V+ L+V AR ++DP + + +++ +++E+ L+C
Sbjct: 1161 MPTDSVFGAEMDMVRWVETHLEV---AGSARDKLIDPKLKPLLPFEEDAACQVLEIALQC 1217
Query: 735 LSNEPKDRPS 744
P++RPS
Sbjct: 1218 TKTSPQERPS 1227
|
Together with GSO2, receptor-like serine/threonine-kinase required during the development of the epidermal surface in embryos and cotyledons. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P47735|RLK5_ARATH Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 180/683 (26%), Positives = 304/683 (44%), Gaps = 89/683 (13%)
Query: 124 LWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLL 183
L GPLP SI S +L L L +N L+G +P Q+ + LQ + L N+F+G +P+ +
Sbjct: 319 LEGPLPESITRSKTLSELKLFNNRLTGVLPSQLGANSPLQYVDLSYNRFSGEIPANVCGE 378
Query: 184 QVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIP-DLRNLKNLRVFDVQDNY 242
L L L +NS SG + +L +SL V LS N LSG+IP L L + ++ DN
Sbjct: 379 GKLEYLILIDNSFSGEISNNLGKCKSLTRVRLSNNKLSGQIPHGFWGLPRLSLLELSDNS 438
Query: 243 FGPRFPRL---HKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLS 299
F P+ K + L + NRF G P+E+ S N + ++ + N F G SL+
Sbjct: 439 FTGSIPKTIIGAKNLSNLRISKNRFS-GSIPNEIGSLNGIIEISGAENDFSGEIPESLVK 497
Query: 300 LPSITYLDIHGNKLTGLLLQNM------------------------SCNPQLAFVDLSSN 335
L ++ LD+ N+L+G + + + P L ++DLSSN
Sbjct: 498 LKQLSRLDLSKNQLSGEIPRELRGWKNLNELNLANNHLSGEIPKEVGILPVLNYLDLSSN 557
Query: 336 LLTGYLPSCLQVEAKTRLVLYSKNCLSNEEQEQHPSNFCQNEALAVKVLPHKQKNKSSYA 395
+G +P LQ K ++ S N LS + +P NK YA
Sbjct: 558 QFSGEIPLELQ-NLKLNVLNLSYNHLSGK-------------------IPPLYANKI-YA 596
Query: 396 SSVVGGTVGGIAVVGAVLLVVKKVYNKNNNKVETTSTRFILEN-VSTINTVKLLSDARYI 454
+G + + G L K +KN V T F+L V + V ++ R +
Sbjct: 597 HDFIGNPGLCVDLDG---LCRKITRSKNIGYVWILLTIFLLAGLVFVVGIVMFIAKCRKL 653
Query: 455 SETMKMGASLPAYRTFTLDELKE--ATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSL 512
+ +R+F E DC D + + S G++YK +L G +VA++ L
Sbjct: 654 RALKSSTLAASKWRSFHKLHFSEHEIADCLDEKNVIGFGSSGKVYKVELRGGEVVAVKKL 713
Query: 513 KMSKKSSPHMYT----------YHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIF 562
S K Y+ +E + +RH ++V C S L++
Sbjct: 714 NKSVKGGDDEYSSDSLNRDVFAAEVETLGTIRHKSIVRLWCCC-------SSGDCKLLVY 766
Query: 563 EYAPNETLRSFISGP---GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVL 619
EY PN +L + G G L W +R+ A+ +G+ +LH VP + ++K +++L
Sbjct: 767 EYMPNGSLADVLHGDRKGGVVLGWPERLRIALDAAEGLSYLHHDCVPPIVHRDVKSSNIL 826
Query: 620 LDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQ------DDKSDVYDIGI 673
LD ++ K+ + + + + G + E S + E ++KSD+Y G+
Sbjct: 827 LDSDYGAKVADFGIAKVGQMSGSKTPEAMSGIAGSCGYIAPEYVYTLRVNEKSDIYSFGV 886
Query: 674 ILIEIIVGR-PITSENVVVLVKDLLQ-VNIGTDEAR-KSIVDPAVMNECSDESLKRMMEL 730
+L+E++ G+ P SE + KD+ + V D+ + ++DP + + +E + +++ +
Sbjct: 887 VLLELVTGKQPTDSE---LGDKDMAKWVCTALDKCGLEPVIDPKLDLKFKEE-ISKVIHI 942
Query: 731 CLRCLSNEPKDRPSVEDTLWNLQ 753
L C S P +RPS+ + LQ
Sbjct: 943 GLLCTSPLPLNRPSMRKVVIMLQ 965
|
Receptor with a dual specificity kinase activity acting on both serine/threonine- and tyrosine-containing substrates that controls floral organ abscission. May interact with the 'INFLORESCENCE DEFICIENT IN ABSCISSION' (IDA) ligands family. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9FIZ3|GSO2_ARATH LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 179 bits (455), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 166/669 (24%), Positives = 303/669 (45%), Gaps = 72/669 (10%)
Query: 108 LGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLIL 167
LG ++L L L G +P + S L +L++S N LSG IPV++ + L + L
Sbjct: 596 LGKSTNLDRLRLGKNQFTGRIPRTFGKISELSLLDISRNSLSGIIPVELGLCKKLTHIDL 655
Query: 168 DDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIP-D 226
++N +G +P+ L L +L L L +N G LP + L ++ + L N L+G IP +
Sbjct: 656 NNNYLSGVIPTWLGKLPLLGELKLSSNKFVGSLPTEIFSLTNILTLFLDGNSLNGSIPQE 715
Query: 227 LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLV-LRNNRFQF-GLNPDELRSYNQLQK-LD 283
+ NL+ L ++++N P K+ L LR +R G P E+ LQ LD
Sbjct: 716 IGNLQALNALNLEENQLSGPLPSTIGKLSKLFELRLSRNALTGEIPVEIGQLQDLQSALD 775
Query: 284 ISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPS 343
+S N F G ++ +LP + LD+ N+L G + + L +++LS N L G L
Sbjct: 776 LSYNNFTGRIPSTISTLPKLESLDLSHNQLVGEVPGQIGDMKSLGYLNLSYNNLEGKLKK 835
Query: 344 CLQVEAKTRLVLYSKNCLSNEEQEQHPSNFCQNEALAVKVLPHKQKNKSSYASSVVGGTV 403
V + C S P + C K + S + V+ +
Sbjct: 836 QFSRWQADAFVGNAGLCGS-------PLSHCNRAG-------SKNQRSLSPKTVVIISAI 881
Query: 404 GGIAVVGAVLLVVKKVYNKNNNKVETTSTRFILENVSTINTVKLLSDARYISETMKMGAS 463
+A + ++LV+ + +N++ + + V N+ + + + G
Sbjct: 882 SSLAAIALMVLVIILFFKQNHD---------LFKKVRGGNSAFSSNSSSSQAPLFSNGG- 931
Query: 464 LPAYRTFTLDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSL-----KMSKKS 518
A D++ EAT + + G++YK +L +G +A++ + MS KS
Sbjct: 932 --AKSDIKWDDIMEATHYLNEEFMIGSGGSGKVYKAELKNGETIAVKKILWKDDLMSNKS 989
Query: 519 SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFI---- 574
+ ++ + +RH +LV +G+C + + LI+EY N ++ ++
Sbjct: 990 ----FNREVKTLGTIRHRHLVKLMGYC-----SSKADGLNLLIYEYMANGSVWDWLHANE 1040
Query: 575 -SGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633
+ L W R+ A+ + +GV++LH VP + ++K ++VLLD N + + L
Sbjct: 1041 NTKKKEVLGWETRLKIALGLAQGVEYLHYDCVPPIVHRDIKSSNVLLDSNIEAHLGDFGL 1100
Query: 634 PLL----------AEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRP 683
+ + GS +P S+ A +KSDVY +GI+L+EI+ G+
Sbjct: 1101 AKILTGNYDTNTESNTMFAGSYGYIAPEYAYSLKAT----EKSDVYSMGIVLMEIVTGKM 1156
Query: 684 ITSE------NVVVLVKDLLQVNIGTDEARKSIVDPAVMN--ECSDESLKRMMELCLRCL 735
T ++V V+ +L G+ EAR+ ++D + + C +E+ +++E+ L+C
Sbjct: 1157 PTEAMFDEETDMVRWVETVLDTPPGS-EAREKLIDSELKSLLPCEEEAAYQVLEIALQCT 1215
Query: 736 SNEPKDRPS 744
+ P++RPS
Sbjct: 1216 KSYPQERPS 1224
|
Together with GSO1, receptor-like serine/threonine-kinase required during the development of the epidermal surface in embryos and cotyledons. Involved in the nuclear division phase of megagametogenesis. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8L899|BRI1_SOLPE Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1 | Back alignment and function description |
|---|
Score = 179 bits (454), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 206/780 (26%), Positives = 331/780 (42%), Gaps = 136/780 (17%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSS 136
NL +L ++NN+ G + D +++LKVL L + GP+P S+++ S
Sbjct: 399 NLPKLETLDMSSNNLTGIIPSGICKDP-------MNNLKVLYLQNNLFKGPIPDSLSNCS 451
Query: 137 SLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSL 196
L L+LS NYL+GSIP + SL L+ LIL N+ +G +P EL LQ L L L N L
Sbjct: 452 QLVSLDLSFNYLTGSIPSSLGSLSKLKDLILWLNQLSGEIPQELMYLQALENLILDFNDL 511
Query: 197 SGFLPVSLTGLQSLRVVSLSANHLSGEIP-------------------------DLRNLK 231
+G +P SL+ L +SLS N LSGEIP +L N +
Sbjct: 512 TGPIPASLSNCTKLNWISLSNNQLSGEIPASLGRLSNLAILKLGNNSISGNIPAELGNCQ 571
Query: 232 NLRVFDVQDNYF-GPRFPRLHKK---MVTLVLRNNRFQFGLNPD-----------ELRSY 276
+L D+ N+ G P L K+ + +L R+ + N E
Sbjct: 572 SLIWLDLNTNFLNGSIPPPLFKQSGNIAVALLTGKRYVYIKNDGSKECHGAGNLLEFGGI 631
Query: 277 NQLQKLDISLNR-------FVGPFIPSLLSLPSITYLDIHGNKLTG-----------LLL 318
Q Q IS + G P+ S+ +LD+ NKL G L +
Sbjct: 632 RQEQLDRISTRHPCNFTRVYRGITQPTFNHNGSMIFLDLSYNKLEGSIPKELGAMYYLSI 691
Query: 319 QNMSCN------PQ-------LAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSNEE 365
N+ N PQ +A +DLS N G +P+ L + S N LS
Sbjct: 692 LNLGHNDLSGMIPQQLGGLKNVAILDLSYNRFNGTIPNSLTSLTLLGEIDLSNNNLSGMI 751
Query: 366 QEQHPSNF-----CQNEALAVKVLP-------------HKQ--KNKSSYASSVVGGTVGG 405
E P + N +L LP H++ + ++S A SV G +
Sbjct: 752 PESAPFDTFPDYRFANNSLCGYPLPLPCSSGPKSDANQHQKSHRRQASLAGSVAMGLLFS 811
Query: 406 IAVVGAVLLVVKKVYNKNNNKVETTSTRFI--LENVSTINTVKLLSDARYISETMKMGAS 463
+ + +++V + K K E ++ + +T N+ + AR + ++ + A
Sbjct: 812 LFCIFGLIIVAIET-KKRRRKKEAALEAYMDGHSHSATANSAWKFTSARE-ALSINLAAF 869
Query: 464 LPAYRTFTLDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMY 523
R T +L EAT+ F + S + G +YK +L DG++VAI+ L +
Sbjct: 870 EKPLRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREF 929
Query: 524 TYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTW 583
T +E I K++H NLV LG+C + + + ++Y +Y E + G KL W
Sbjct: 930 TAEMETIGKIKHRNLVPLLGYC---KVGEERL-LVYEYMKYGSLEDVLHDRKKTGIKLNW 985
Query: 584 VQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARG-- 641
R AI +G+ FLH +P + ++K ++VLLDEN +++ + + L A
Sbjct: 986 PARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTH 1045
Query: 642 ------KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSE------NV 689
G+ P S T K DVY G++L+E++ G+ T N+
Sbjct: 1046 LSVSTLAGTPGYVPPEYYQSFRCST----KGDVYSYGVVLLELLTGKQPTDSADFGDNNL 1101
Query: 690 VVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLK----RMMELCLRCLSNEPKDRPSV 745
V VK + I TD + D ++ E D S++ + +++ CL + RP++
Sbjct: 1102 VGWVKLHAKGKI-TD-----VFDRELLKE--DASIEIELLQHLKVACACLDDRHWKRPTM 1153
|
Receptor with a serine/threonine-protein kinase activity. Involved in the perception of systemin, a peptide hormone responsible for the systemic activation of defense genes in leaves of wounded plants. May also regulate, in response to brassinosteroid binding, a signaling cascade involved in plant development. Solanum peruvianum (taxid: 4082) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 769 | ||||||
| 224097536 | 755 | predicted protein [Populus trichocarpa] | 0.960 | 0.978 | 0.629 | 0.0 | |
| 255546775 | 793 | leucine-rich repeat protein, putative [R | 0.970 | 0.940 | 0.626 | 0.0 | |
| 359487007 | 863 | PREDICTED: probable inactive leucine-ric | 0.962 | 0.857 | 0.591 | 0.0 | |
| 225439195 | 786 | PREDICTED: probable inactive leucine-ric | 0.973 | 0.952 | 0.566 | 0.0 | |
| 224144836 | 774 | predicted protein [Populus trichocarpa] | 0.944 | 0.937 | 0.582 | 0.0 | |
| 255569464 | 782 | leucine-rich repeat protein, putative [R | 0.981 | 0.965 | 0.555 | 0.0 | |
| 224123880 | 784 | predicted protein [Populus trichocarpa] | 0.942 | 0.924 | 0.576 | 0.0 | |
| 357508805 | 774 | hypothetical protein MTR_7g086420 [Medic | 0.958 | 0.952 | 0.538 | 0.0 | |
| 145308448 | 778 | receptor-like kinase 17 precursor [Solan | 0.973 | 0.962 | 0.548 | 0.0 | |
| 356565741 | 772 | PREDICTED: probable inactive leucine-ric | 0.941 | 0.937 | 0.551 | 0.0 |
| >gi|224097536|ref|XP_002310977.1| predicted protein [Populus trichocarpa] gi|222850797|gb|EEE88344.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 910 bits (2352), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/769 (62%), Positives = 596/769 (77%), Gaps = 30/769 (3%)
Query: 1 MAKPVDK---LHLLVFIILSIIVSAPHSNQLQLFQYQTLVRIQQLLNYPSVSSSFNTTTV 57
MAKPV LHLL F+ILS S+QLQ FQ Q+L+RIQQLLNYPS S+SF+ TT
Sbjct: 1 MAKPVHYPCYLHLL-FLILSF----HRSSQLQPFQSQSLLRIQQLLNYPSFSTSFDNTT- 54
Query: 58 TDFCNIEPTPSLTLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVL 117
DFCNIEPTPSLTL+CYEDN+TQLHI G N G+ NFSTD FF+T+ SLSSLKVL
Sbjct: 55 -DFCNIEPTPSLTLLCYEDNITQLHIVG------NTGVPPNFSTDYFFATVASLSSLKVL 107
Query: 118 SLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVP 177
SLVSLG GPLP SI SSLEILN SSNY SGSIP +SSL++LQTLILD NKF+G VP
Sbjct: 108 SLVSLGFSGPLPESIGQLSSLEILNASSNYFSGSIPASLSSLKSLQTLILDHNKFSGEVP 167
Query: 178 SELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFD 237
+ L VL+VLSLKNNSLSG+LP SLT L+SLR+ SLS NHLSG++PDL NL NL+V +
Sbjct: 168 GWVGFLPVLAVLSLKNNSLSGYLPNSLTRLESLRIFSLSKNHLSGQVPDLHNLTNLQVLE 227
Query: 238 VQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSL 297
++DN+FGP FP LH K+VTLVLRNN F G+ P +L +Y+QLQKLD+S N FVGPF+PSL
Sbjct: 228 LEDNHFGPDFPGLHNKVVTLVLRNNSFHSGI-PADLVTYHQLQKLDLSFNGFVGPFLPSL 286
Query: 298 LSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYS 357
LS P + YLDI NK TG+L +NMSC+ +LA+VDLSSNLLTG LP+CL + +++R VLY+
Sbjct: 287 LSSPPMNYLDISHNKFTGMLFENMSCHAELAYVDLSSNLLTGELPTCLNLSSESRTVLYA 346
Query: 358 KNCLSNEEQEQHPSNFCQNEALAVKVLP-----HKQKNKSSYASSVVGGTVGGIAVVGAV 412
+NCLSN+EQEQHP NFC NEALAVK+LP H++ +K ASS +GG VGGIA+VG V
Sbjct: 347 RNCLSNKEQEQHPFNFCHNEALAVKILPRDDVKHQRHDKEVLASSTMGGVVGGIAIVGLV 406
Query: 413 LLVVKKVYNKNNNKVETTSTRFILENVSTINTVKLLSDARYISETMKMGASLPAYRTFTL 472
L VK+VY+K++ V+ TR +++N+S++NTVKLLSDAR+IS+TMK+GASLP YRTF+L
Sbjct: 407 FLFVKRVYSKDD--VKKPQTRILVKNLSSVNTVKLLSDARHISQTMKLGASLPNYRTFSL 464
Query: 473 DELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISK 532
+ELKEAT+ FD+S+ + + S Q+YKGKL DG+LVAIRS K+ KK S +T+HIELISK
Sbjct: 465 EELKEATNNFDASNLLSEDSSSQMYKGKLNDGSLVAIRSSKVRKKISQRTFTHHIELISK 524
Query: 533 LRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISG-PGYKLTWVQRIAAAI 591
LRH++L+SALGHC D DD S S I+ IFE+ PN TLR +ISG P KL W QRI AI
Sbjct: 525 LRHNHLISALGHCFDCCQDDSSTSRIFNIFEFVPNGTLRDYISGIPENKLKWPQRIGVAI 584
Query: 592 AIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPA 651
+ +G+QFLHTGIVPGVF NNLKITDVLLD + VK+ SYNLPLL E G A VSS
Sbjct: 585 GVARGIQFLHTGIVPGVFPNNLKITDVLLDHDLLVKLCSYNLPLLTE--GSVGAAVSS-G 641
Query: 652 KKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDE-ARKSI 710
K R +DK D+YD+G+IL+EII GRP+ +N V++ KDLL+V++ D+ AR++I
Sbjct: 642 TKQKFGTRDRHEDKEDIYDLGVILVEIIFGRPVV-KNEVIVSKDLLKVSMTVDDVARRNI 700
Query: 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759
VDPA+ ECSDESLK MME+C+RCLS EP DRPSV+D LWNLQFA Q++
Sbjct: 701 VDPAINKECSDESLKIMMEICIRCLSKEPSDRPSVDDVLWNLQFAAQVR 749
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255546775|ref|XP_002514446.1| leucine-rich repeat protein, putative [Ricinus communis] gi|223546442|gb|EEF47942.1| leucine-rich repeat protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 889 bits (2296), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/773 (62%), Positives = 590/773 (76%), Gaps = 27/773 (3%)
Query: 9 HLLVFIILSIIVSAPHSNQLQLFQYQTLVRIQQLLNYPSVSSSFNTTTVTDFCNIEPTPS 68
HLL+F + S + HS QL Q Q+++ IQQLL+YP SS NTT DFCNIEPTPS
Sbjct: 10 HLLLFSV-SFLSLVHHSCQLPSAQSQSILVIQQLLDYPLSLSSINTTA--DFCNIEPTPS 66
Query: 69 LTLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPL 128
LTLVCYEDN+TQLHI G NN L +FS D+FF+TL +LS+LKVLSLVSLGLWGPL
Sbjct: 67 LTLVCYEDNITQLHITG---NNGFPPLPQSFSIDSFFTTLAALSNLKVLSLVSLGLWGPL 123
Query: 129 PGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSV 188
P +I SLEILN+SSN+L G+IP Q+SSLRNLQTL+L+ N FTG VPS LS L +L+V
Sbjct: 124 PATIGQLYSLEILNVSSNHLYGTIPEQLSSLRNLQTLVLEHNNFTGHVPSCLSSLPLLAV 183
Query: 189 LSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFP 248
LSLKNNS G LP S+T +++LRV+S+S N LSGE+PD+ +L NL+V D+QDNYFGP FP
Sbjct: 184 LSLKNNSFGGSLPKSMTSMENLRVLSVSHNLLSGEVPDIHHLTNLQVVDLQDNYFGPHFP 243
Query: 249 RLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDI 308
LH +V+LVLRNN F FG+ P +L SY QLQ+LDISLN FVGPF+PSLLSLPS+TY+DI
Sbjct: 244 SLHSNLVSLVLRNNSFHFGI-PSDLISYYQLQRLDISLNGFVGPFLPSLLSLPSLTYIDI 302
Query: 309 HGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSNEEQEQ 368
NK TG+L +NMSCN LA VDLSSNLL+G LP+CL+ +KT +V ++ NCLSN+EQ+Q
Sbjct: 303 SENKFTGMLFENMSCNFNLAHVDLSSNLLSGDLPTCLKSSSKTMVVHFASNCLSNQEQKQ 362
Query: 369 HPSNFCQNEALAVKVLPHKQK-------NKSSYASSVVGGTVGGIAVVGAVLLVVKKVYN 421
HPSNFCQNEALAVK PH ++ +K+ AS +GG +G I +VG V LV+ ++Y+
Sbjct: 363 HPSNFCQNEALAVK--PHDKEMHNKRPHDKAVLASGTIGGIIGAIIIVGLVSLVIGRLYS 420
Query: 422 KNNNKVETTSTRFILENVSTINTVKLLSDARYISETMKMGASLPAYRTFTLDELKEATDC 481
K VE R I+ENVS++NTVKLLSDARYIS+TMK+GA+LP YRTF L+ELKEAT
Sbjct: 421 KFT--VEKPQARLIMENVSSVNTVKLLSDARYISQTMKLGANLPPYRTFALEELKEATQN 478
Query: 482 FDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSA 541
FD+S + H +IY+GKL DGTLVAIRSL + KK S T+HIELISKLRHS+LVSA
Sbjct: 479 FDNSHLL---DHYKIYRGKLRDGTLVAIRSLTVKKKHSQQNITHHIELISKLRHSHLVSA 535
Query: 542 LGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISG-PGYKLTWVQRIAAAIAIVKGVQFL 600
LGHC D LDD S S I+LIFE+ PN TLR +ISG PG KL W QRI A I + KG+QFL
Sbjct: 536 LGHCFDCCLDDSSTSRIFLIFEFLPNGTLRDYISGPPGKKLNWKQRIGAGIGVAKGIQFL 595
Query: 601 HTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLART 660
HTG+VPGVFSNNLKITDVLLD + HVK++SYNLPLLAE+R A V+SP K L R
Sbjct: 596 HTGVVPGVFSNNLKITDVLLDHDLHVKVSSYNLPLLAESRRMVGAPVTSPGPKQCTLTRE 655
Query: 661 EQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDE-ARKSIVDPAVMNEC 719
DDK DVYD+G+I +EIIVGRPI + V++VKDLLQV+I D+ AR+SI+DPAV EC
Sbjct: 656 TDDDKKDVYDLGVIFVEIIVGRPIMFLDEVIVVKDLLQVSITVDDTARRSIIDPAVCKEC 715
Query: 720 SDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ----GLKENNQEA 768
+D+SLK MM +C+RCLS++P DRPSVED LWNLQFA Q+Q G NNQE+
Sbjct: 716 ADDSLKTMMAICIRCLSDKPSDRPSVEDVLWNLQFAAQVQESWEGGSHNNQES 768
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359487007|ref|XP_002264129.2| PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 844 bits (2181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/768 (59%), Positives = 569/768 (74%), Gaps = 28/768 (3%)
Query: 9 HLLVFIILSIIVSAPHSNQLQLFQYQTLVRIQQLLNYPSVSSSFNTTTVTDFCNIE---- 64
HLL ++ + HS QL+ Q Q LV+I+QLL PSV S +++ D C+++
Sbjct: 88 HLLCLLMAIFLSGIHHSCQLEPSQSQALVKIRQLLYNPSVVSIWDSRP--DICDLDQLES 145
Query: 65 PTPSLTLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLK----VLSLV 120
+ SLTL CYED++TQLHI G+N L NFS D+FF+ L SL +LK VLSLV
Sbjct: 146 SSHSLTLACYEDSITQLHIIGNNE-----PLPQNFSADSFFAALTSLPNLKSCLCVLSLV 200
Query: 121 SLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSEL 180
SLG+WGPLP + SSLEILNL+SNY + +IPVQ+SSL+NLQTL+L+ N FTG VP L
Sbjct: 201 SLGMWGPLPTVTGNLSSLEILNLTSNYFNATIPVQVSSLKNLQTLVLEGNMFTGTVPDWL 260
Query: 181 SLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQD 240
S L +L+VLSLKNNS G LP SL+ L+++R++ LS NHLSG++PDLRNL NL+V D+QD
Sbjct: 261 SSLPLLAVLSLKNNSFHGTLPDSLSNLRNIRILDLSMNHLSGQVPDLRNLTNLQVLDIQD 320
Query: 241 NYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSL 300
N+FGP+FP LH K+V LVLRNN+F G+ P EL Y QLQKLDIS N FVGPF+PSLLSL
Sbjct: 321 NFFGPQFPSLHTKLVALVLRNNQFHSGI-PVELSYYYQLQKLDISFNGFVGPFLPSLLSL 379
Query: 301 PSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNC 360
PSITYLD+ N+ TG+L NMSCNPQLA V+LSSNLLTG LP CLQ K+R+V+Y +NC
Sbjct: 380 PSITYLDVAKNRFTGMLFPNMSCNPQLALVNLSSNLLTGDLPPCLQSAPKSRVVVYERNC 439
Query: 361 LSNEEQEQHPSNFCQNEALAVKVLPHKQKNK------SSYASSVVGGTVGGIAVVGAVLL 414
LS+ +Q QHP +FC+ EA+AVK+LPH K + + AS +VG VG +A+VG V L
Sbjct: 440 LSSGDQVQHPYSFCRIEAMAVKILPHMHKEERRPFSIAVLASIIVGVIVGVVALVGLVFL 499
Query: 415 VVKKVYNKNNNKVETTSTRFILENVSTINTVKLLSDARYISETMKMGA-SLPAYRTFTLD 473
V++++ +N K T +TR E ST++ KL+ DAR IS+TMK+GA LPAYRTF L+
Sbjct: 500 VIRRLNAQNTAK--TPATRLPSEQFSTVDAAKLIFDARNISQTMKLGALGLPAYRTFFLE 557
Query: 474 ELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKL 533
ELKEAT+ FD SS + + SHGQIYKGKLTDGT+VAIRSL+M ++ Y +HIELISKL
Sbjct: 558 ELKEATNNFDESSLI-EGSHGQIYKGKLTDGTIVAIRSLQMRRRQRSQSYMHHIELISKL 616
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISG-PGYKLTWVQRIAAAIA 592
RHS+LVSALGHC + DD +S I+LI E PN TLR ISG +L W QRIAAAI
Sbjct: 617 RHSHLVSALGHCFECFPDDSCVSRIFLITESIPNGTLRGCISGNRRQRLNWTQRIAAAIG 676
Query: 593 IVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAK 652
+VKG+QFLHTGIVPG+FSNNLKITDVLLD N HVKI+SYNLPLLAE+R + VSS
Sbjct: 677 VVKGIQFLHTGIVPGLFSNNLKITDVLLDHNLHVKISSYNLPLLAESREQVGVGVSSSGL 736
Query: 653 KTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDE-ARKSIV 711
K + AR + DK+DVYD+G+IL+EIIVGRPITS+N VV+ +DLL V + D+ ARK+I+
Sbjct: 737 KGNAQARGKDGDKNDVYDLGVILLEIIVGRPITSKNDVVVARDLLIVGMKADDIARKTIM 796
Query: 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759
DPAV E S ES+K +ME+C+RCL NEP +RPSVED LWNLQFA Q+Q
Sbjct: 797 DPAVGKEWSGESIKTLMEICIRCLHNEPSERPSVEDVLWNLQFAAQVQ 844
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225439195|ref|XP_002269509.1| PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 [Vitis vinifera] gi|296085894|emb|CBI31218.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 820 bits (2117), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/768 (56%), Positives = 561/768 (73%), Gaps = 19/768 (2%)
Query: 1 MAKPVDKLHLLVFIILSIIVSAPHSNQLQLFQYQTLVRIQQLLNYPSVSSSFNTTTVTDF 60
MAK LLV ++ I+ S S QL Q QTL+RIQ +LN+P++ SS+N T DF
Sbjct: 1 MAKGFCHWALLVLVL--ILGSIRPSEQLPSSQAQTLIRIQGILNFPAILSSWNNNT--DF 56
Query: 61 CNIEPTPSLTLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLV 120
C+ EP+ SLT+VCYE+++TQLHI G L NFS D+F +TL L SLKVL+LV
Sbjct: 57 CDTEPSSSLTVVCYEESITQLHIIGHKGV---PPLPRNFSIDSFITTLVKLPSLKVLTLV 113
Query: 121 SLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSEL 180
SLGLWGP+P IA SSLEILN+SSNY G+IP +I+ L +LQTLILDDN F G + L
Sbjct: 114 SLGLWGPMPSKIARLSSLEILNISSNYFYGTIPEEIAYLTSLQTLILDDNMFIGELSDWL 173
Query: 181 SLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQD 240
SLL VL+VLSLK NS +G LP SL L++LR+++LS N GE+PDL +L NL+V D++D
Sbjct: 174 SLLPVLAVLSLKKNSFNGSLPSSLGSLENLRILTLSHNRFYGEVPDLSSLDNLQVLDLED 233
Query: 241 NYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSL 300
N GP+FPRL K+VTLVL+ NRF G+ P E+ SY QL++LDIS NRF GPF PSLL+L
Sbjct: 234 NALGPQFPRLGTKLVTLVLKKNRFSSGI-PVEVSSYYQLERLDISYNRFAGPFPPSLLAL 292
Query: 301 PSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNC 360
PS+TYL+I GNK TG+L SCN L FVDLSSNLLTG LP+CL+ ++K R+VLY +NC
Sbjct: 293 PSVTYLNIAGNKFTGMLFGYQSCNAGLEFVDLSSNLLTGNLPNCLKSDSKKRVVLYGRNC 352
Query: 361 LSNEEQEQHPSNFCQNEALAVKVLPHKQKNKSS----YASSVVGGTVGGIAVVGAVLLVV 416
L+ EQ QHP +FC+NEALAV ++PH++K K + A +GG +GGIA+ V LVV
Sbjct: 353 LATGEQNQHPFSFCRNEALAVGIIPHRKKQKGASKAVLALGTIGGILGGIALFCLVFLVV 412
Query: 417 KKVYNKNNNKVETTSTRFILENVSTINTVKLLSDARYISETMKMGA-SLPAYRTFTLDEL 475
++V K K T T+ I EN ST+ + KL SDARY+S+TM +GA LPAYRTF+L+EL
Sbjct: 413 RRVNAKKATK--TPPTKLIAENASTVYSSKLFSDARYVSQTMNLGALGLPAYRTFSLEEL 470
Query: 476 KEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRH 535
+EAT+ FD+S+FM + S GQ+Y+GKL DG+LVAIR LKM K S + +HIELI KLRH
Sbjct: 471 EEATNNFDTSTFMGEGSQGQMYRGKLKDGSLVAIRCLKMKKSHSTQNFMHHIELILKLRH 530
Query: 536 SNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYK--LTWVQRIAAAIAI 593
+LVS+LGHC + LDD S+S I+LIFEY PN TLRS+IS + L+W QRIAAAI +
Sbjct: 531 RHLVSSLGHCFECYLDDASVSRIFLIFEYVPNGTLRSWISEGRSRQTLSWTQRIAAAIGV 590
Query: 594 VKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGK-GSAEVSSPAK 652
KG++FLHTGI+PGV+SNNLKITD+LLD+N KI+SYNLPLLAE GK S S +K
Sbjct: 591 AKGIEFLHTGILPGVYSNNLKITDILLDQNLVAKISSYNLPLLAENMGKVSSGISSGGSK 650
Query: 653 KTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEA-RKSIV 711
+ SV AR + +DK D+YD G+IL+E+I+GRP S N V ++++ LQ + D+A R+++V
Sbjct: 651 EFSVNARVQHEDKIDIYDFGVILLELIMGRPFNSTNEVDVIRNWLQACVTADDASRRNMV 710
Query: 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759
D AV CSDESLK MME+C+RCL +P +RPS+ED LWNLQFA Q++
Sbjct: 711 DAAVHRTCSDESLKTMMEICIRCLHKDPAERPSIEDVLWNLQFAAQVE 758
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224144836|ref|XP_002325432.1| predicted protein [Populus trichocarpa] gi|222862307|gb|EEE99813.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 811 bits (2095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/743 (58%), Positives = 549/743 (73%), Gaps = 17/743 (2%)
Query: 25 SNQLQLFQYQTLVRIQQLLNYPSVSSSFNTTTVTDFCNIEPTPSLTLVCYEDNLTQLHIA 84
S QLQ Q +TL+RIQ+LLNYPS SS+N+TT DFCN EP S+T+VCYE+++TQLHI
Sbjct: 23 SEQLQSSQGETLLRIQRLLNYPSALSSWNSTT--DFCNTEPNASVTVVCYENSITQLHII 80
Query: 85 GDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLS 144
G+ + L NFS D+F +TL L +LKVL+LVSLGLWGPLPG IA SSLEILN+S
Sbjct: 81 GNKGTPL---LPRNFSIDSFVTTLVGLPNLKVLTLVSLGLWGPLPGKIARLSSLEILNVS 137
Query: 145 SNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSL 204
SN+L ++P +ISSL LQ+L+LDDN F VP+ + L VLSVLSLK N L+G LP SL
Sbjct: 138 SNFLYDAVPQEISSLAALQSLVLDDNMFADEVPNWIGSLPVLSVLSLKKNMLNGSLPDSL 197
Query: 205 TGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRF 264
+ L +LRV+ LS N+ GE+PDL +L NL+V D++DN GP+FP L K+++LVL N+F
Sbjct: 198 SNLDNLRVLVLSHNYFRGEVPDLSSLTNLQVLDLEDNALGPQFPLLGNKLISLVLSKNKF 257
Query: 265 QFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCN 324
+ GL P E+ SY QLQ+LD+S N+FVGPF SLLSLPS+TYL++ NK TG+L +N SC+
Sbjct: 258 RDGL-PAEVTSYYQLQRLDLSSNKFVGPFPQSLLSLPSVTYLNVADNKFTGMLFENQSCS 316
Query: 325 PQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSNEEQEQHPSNFCQNEALAVKVL 384
L FVDLSSNL+TG LP+CL ++K R VLY+ NCL+ ++ QHP + C+NEALAV +L
Sbjct: 317 ADLEFVDLSSNLMTGQLPNCLLQDSK-RKVLYAANCLATGDENQHPISLCRNEALAVGIL 375
Query: 385 PHKQKNKSS---YASSVVGGTVGGIAVVGAVLLVVKKVYNKNNNKVETTSTRFILENVST 441
P ++K K+S A V+GG VGGIA+VG + L V+KV K+ ++ +TR I EN ST
Sbjct: 376 PQRKKRKASKETIAFGVIGGIVGGIALVGLIYLAVRKV--KSRKTIKRPNTRLIAENAST 433
Query: 442 INTVKLLSDARYISETMKMGA-SLPAYRTFTLDELKEATDCFDSSSFMCDASHGQIYKGK 500
LL DARYIS+TMK+GA LP YRTF+L+E++EAT+ FD+S+FM + S GQ+Y+G+
Sbjct: 434 GYPSNLLPDARYISQTMKLGALGLPPYRTFSLEEVEEATNNFDTSAFMGEGSQGQMYRGR 493
Query: 501 LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYL 560
L DG+ VAIR LKM + S + +HIELISKLRH +LVSALGHC + LDD S+S I+L
Sbjct: 494 LKDGSFVAIRCLKMKRSHSTQNFMHHIELISKLRHRHLVSALGHCFECYLDDSSVSRIFL 553
Query: 561 IFEYAPNETLRSFISG--PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDV 618
+FEY PN TLRS+ISG KL W RIAAAI + KG+QFLHTGIVPGV+SNNLKITDV
Sbjct: 554 VFEYVPNGTLRSWISGGHAWQKLQWTHRIAAAIGVAKGIQFLHTGIVPGVYSNNLKITDV 613
Query: 619 LLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKT-SVLARTEQDDKSDVYDIGIILIE 677
LLD+N KI+SYNLPLLAE +G SS A K S AR QD K DVYD G+IL+E
Sbjct: 614 LLDQNLIAKISSYNLPLLAENKGMVVHGTSSGASKDLSTSARINQDQKVDVYDFGLILLE 673
Query: 678 IIVGRPITSENVVVLVKDLLQVNIGTDE-ARKSIVDPAVMNECSDESLKRMMELCLRCLS 736
IIVGR +TS+N V ++KD LQ +I +D+ AR SIVDP V CSD+SLK MME+C+ CL
Sbjct: 674 IIVGRSLTSKNEVRVLKDQLQASITSDDTARSSIVDPVVRRSCSDQSLKTMMEICVSCLL 733
Query: 737 NEPKDRPSVEDTLWNLQFATQIQ 759
P DRPSVED LWNLQ+A Q+Q
Sbjct: 734 KNPADRPSVEDILWNLQYAAQVQ 756
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255569464|ref|XP_002525699.1| leucine-rich repeat protein, putative [Ricinus communis] gi|223534999|gb|EEF36682.1| leucine-rich repeat protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 798 bits (2062), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/779 (55%), Positives = 575/779 (73%), Gaps = 24/779 (3%)
Query: 1 MAKPVDKLHLLVFIILSIIVSAPHSNQLQLFQYQTLVRIQQLLNYPSVSSSFNTTTVTDF 60
MAK +LVFI +++VS HS QLQ Q +TL+RIQ++LNYPS+ +S+N+TT DF
Sbjct: 1 MAKSFQYSAILVFI--TVLVSVNHSEQLQSSQGETLLRIQRILNYPSILNSWNSTT--DF 56
Query: 61 CNIEPTPSLTLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLV 120
CN +P PSLT+VCYED++TQLHI G+ + L NFS ++F +TL SL +LKVL+LV
Sbjct: 57 CNTDPNPSLTVVCYEDSITQLHIIGNKGAPL---LPRNFSIESFVTTLVSLPNLKVLTLV 113
Query: 121 SLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSEL 180
SLGLWGPLPG IA SLE+LN+SSN+L +IP +SSL +LQTL+LDDN +G +P+ L
Sbjct: 114 SLGLWGPLPGKIARLPSLEMLNMSSNFLYDAIPEDLSSLGSLQTLVLDDNMVSGELPNWL 173
Query: 181 SLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQD 240
+L+VLSLK N +G LP SL+ L +LRV++LS N+ GE+PDL +L NL+V D++D
Sbjct: 174 DSFPLLTVLSLKKNMFNGSLPNSLSNLANLRVLALSHNYFYGEVPDLSSLTNLQVLDLED 233
Query: 241 NYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSL 300
N FGP+FP+L K+VTL L N+F+ G+ P E+ SY L++LD+S N+FVGPF P LLSL
Sbjct: 234 NAFGPQFPQLGNKLVTLTLSKNKFRDGI-PAEVSSYYHLRQLDLSKNKFVGPFPPLLLSL 292
Query: 301 PSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNC 360
SITY+++ NKLTG+L +N SC+ L FVDLSSNL+TG+LP CLQ +++ + VLY+ NC
Sbjct: 293 LSITYINVADNKLTGMLFENQSCSADLEFVDLSSNLITGHLPKCLQSDSREK-VLYAGNC 351
Query: 361 LSNEEQEQHPSNFCQNEALAVKVLPHKQKNKSSYASSVV-----GGTVGGIAVVGAVLLV 415
L+ E+Q Q+P +FC+NEALAV +L Q K+ +AS V+ GG GGIA VG + L+
Sbjct: 352 LAIEKQNQNPISFCRNEALAVGIL--TQHKKTRHASKVITLGVIGGVAGGIAAVGLIFLI 409
Query: 416 VKKVYNKNNNKVETTSTRFILENVSTINTVKLLSDARYISETMKMGA-SLPAYRTFTLDE 474
V+KVY + ++ +TR I EN ST KLLSDARY+S+TMK+GA +PAYRTF+L+E
Sbjct: 410 VRKVYAR--KAIKRPTTRLIAENASTGYPSKLLSDARYVSQTMKLGALGIPAYRTFSLEE 467
Query: 475 LKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLR 534
L+EAT+ FD+S+F+ + S GQ+Y+G+L +G+ VAIR LKM + S + +HIELISKLR
Sbjct: 468 LEEATNNFDTSAFIGEGSQGQMYRGRLKNGSYVAIRCLKMKRSYSTQNFMHHIELISKLR 527
Query: 535 HSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYK--LTWVQRIAAAIA 592
H +L+SALGHC + LDD S+S I+L+FEY PN TLRS+IS + L W QRIAAAI
Sbjct: 528 HRHLISALGHCFECYLDDSSVSRIFLVFEYVPNGTLRSWISEKRSRQTLNWAQRIAAAIG 587
Query: 593 IVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAK 652
+ KG+QFLHTGI+PGV+S NLKITDVLLD+N KI SYNLPLLAE GK VSS
Sbjct: 588 VAKGIQFLHTGILPGVYSKNLKITDVLLDQNLVAKICSYNLPLLAENAGKIGHGVSSGGS 647
Query: 653 KTSV-LARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDE-ARKSI 710
+ +AR ++++K DVYD G+IL+EIIVG P+ S N V ++KD LQ +I +DE AR+S+
Sbjct: 648 TDPITVARKDEEEKVDVYDFGVILLEIIVGSPLNSMNEVDVLKDRLQASIISDEAARRSM 707
Query: 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ-GLKENNQEA 768
VDPAV +CSD+SLK MME+C+RCL P DRPSVED LWNLQFA Q+Q G + ++ E
Sbjct: 708 VDPAVKRKCSDQSLKTMMEVCVRCLLKNPADRPSVEDVLWNLQFAAQVQDGWRGDSSEG 766
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224123880|ref|XP_002319187.1| predicted protein [Populus trichocarpa] gi|222857563|gb|EEE95110.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 795 bits (2052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/744 (57%), Positives = 554/744 (74%), Gaps = 19/744 (2%)
Query: 25 SNQLQLFQYQTLVRIQQLLNYPSVSSSFNTTTVTDFCNIEPTPSLTLVCYEDNLTQLHIA 84
S QLQ Q +TL+RIQ+LLNYPS SS + DFCN EP S+T+ CYE ++TQLHI
Sbjct: 23 SEQLQSSQGETLLRIQRLLNYPSSLSS--WNSSIDFCNSEPNASVTVACYEKSITQLHIV 80
Query: 85 GDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLS 144
G+ + L NFS D+F +T+ L +LKVL+LVSLGLWGPLPG IA SSLEILN+S
Sbjct: 81 GNKGTPL---LPGNFSIDSFVTTVVGLPTLKVLTLVSLGLWGPLPGKIARLSSLEILNMS 137
Query: 145 SNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSL 204
SN+L +IP ++SSL LQ+L LDDN F G VP+ + LQVLSVLSL+ N L+G LP SL
Sbjct: 138 SNFLYDAIPQELSSLSGLQSLGLDDNMFAGKVPNWIGSLQVLSVLSLRKNMLNGSLPDSL 197
Query: 205 TGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRF 264
+ L++LRV++L+ N+ GE+PDL +L NL+V D++DN FGP+FP+L K+V+LVL N+F
Sbjct: 198 STLENLRVLALAHNYFKGEVPDLSSLTNLQVLDLEDNAFGPQFPQLGNKLVSLVLSRNKF 257
Query: 265 QFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCN 324
+ GL P E+ SY QLQ+LD+S N FVGPF SLLSLPS+TYL+I NK TG+L +N SC+
Sbjct: 258 RDGL-PAEVTSYYQLQRLDLSNNTFVGPFPQSLLSLPSVTYLNIADNKFTGMLFENQSCS 316
Query: 325 PQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSNEEQEQHPSNFCQNEALAVKVL 384
L FVDLSSNL+TG++P+CL ++K + LY+ NCL+ +Q+QHP + C+NEALAV +L
Sbjct: 317 ADLEFVDLSSNLMTGHMPNCLLQDSKKK-ALYAGNCLATGDQDQHPISICRNEALAVGIL 375
Query: 385 PHKQKNKSS---YASSVVGGTVGGIAVVGAVLLVVKKVYNKNNNKVETTSTRFILENVST 441
P ++K K S A SV+GG VGGIA+VG + L V+KV K+ ++ ++ R I EN ST
Sbjct: 376 PQQKKRKPSKAIIAISVIGGIVGGIALVGLIFLAVRKV--KSGKTIQKSTIRLIAENAST 433
Query: 442 INTVKLLSDARYISETMKMGA-SLPAYRTFTLDELKEATDCFDSSSFMCDASHGQIYKGK 500
KLLSDARYIS+TMK+GA LPAYRTF+L+EL+EAT+ FD+S+FM + S GQIY+G+
Sbjct: 434 GYPTKLLSDARYISQTMKLGALGLPAYRTFSLEELEEATNNFDTSAFMGEGSQGQIYRGR 493
Query: 501 LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYL 560
L DG+ V IR LKM + H + +HIELISKLRH +LVSALGH ++ LDD S+S I+L
Sbjct: 494 LKDGSFVVIRCLKMKRSHGTHNFMHHIELISKLRHRHLVSALGHGFEYYLDDSSVSRIFL 553
Query: 561 IFEYAPNETLRSFISGPGY---KLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITD 617
+FEY PN TLRS+ISG G+ K+ W RIAAAI + KG+QFLHTGIVPGV+SNNLKITD
Sbjct: 554 VFEYVPNGTLRSWISG-GHARQKIHWTHRIAAAIGVAKGIQFLHTGIVPGVYSNNLKITD 612
Query: 618 VLLDENFHVKINSYNLPLLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILI 676
VLLD+N KI+SYNLPLLAE RG G S +K S+ AR QD+K DVYD G+IL+
Sbjct: 613 VLLDQNLVAKISSYNLPLLAENRGMVGHGASSGASKDLSLSARINQDEKVDVYDFGLILL 672
Query: 677 EIIVGRPITSENVVVLVKDLLQVNIGTDE-ARKSIVDPAVMNECSDESLKRMMELCLRCL 735
EI++GR +TS N V +++D LQ +I D+ AR+S+VDPAV CS +SLK MME+C+RCL
Sbjct: 673 EILLGRSLTSGNDVDVLQDQLQASITRDDAARRSMVDPAVRRVCSYQSLKTMMEICVRCL 732
Query: 736 SNEPKDRPSVEDTLWNLQFATQIQ 759
P DRPS+ED LWNLQFA Q+Q
Sbjct: 733 LKNPADRPSIEDILWNLQFAAQVQ 756
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357508805|ref|XP_003624691.1| hypothetical protein MTR_7g086420 [Medicago truncatula] gi|87162732|gb|ABD28527.1| Protein kinase [Medicago truncatula] gi|355499706|gb|AES80909.1| hypothetical protein MTR_7g086420 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 793 bits (2048), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/757 (53%), Positives = 543/757 (71%), Gaps = 20/757 (2%)
Query: 11 LVFIILSIIVSAPHSNQLQLFQYQTLVRIQQLLNYPSVSSSFNTTTVTDFCNIEPTPSLT 70
+ F++++I++S HS QLQ QTL+RIQQ LN+PS S++N +T DFCN + SLT
Sbjct: 4 VFFVLVTILLSINHSEQLQSSHTQTLLRIQQQLNFPSALSNWNNST--DFCNTDSNSSLT 61
Query: 71 LVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPG 130
+VCYED +TQLHI G+ L NFS D+F +TL L SLKVL+LVSLG+WGPLPG
Sbjct: 62 VVCYEDTITQLHIIGEGKT---PPLPKNFSIDSFVTTLVKLPSLKVLTLVSLGIWGPLPG 118
Query: 131 SIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLS 190
IA SSLEI+N+SSN+L GSIPV++SSL NLQTLILDDN F+G VP+ + L+VLS
Sbjct: 119 KIARLSSLEIVNMSSNHLYGSIPVELSSLLNLQTLILDDNMFSGQVPT----VSALTVLS 174
Query: 191 LKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRL 250
LKNN +G LP S++ L++LR++SLS N L G +PDL +L+NL+V ++ DN FGP+FP+L
Sbjct: 175 LKNNLFNGSLPNSVSNLENLRIISLSHNKLYGVVPDLSHLRNLQVLELDDNAFGPQFPKL 234
Query: 251 HKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHG 310
K+VT+VLRNN F+ G+ P ++ SY QL++ DIS N FVGPF P+LLSLPSI YL+I
Sbjct: 235 GNKLVTIVLRNNMFRSGI-PADVSSYYQLERFDISSNTFVGPFQPALLSLPSIAYLNISR 293
Query: 311 NKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSNEEQEQHP 370
NKLTG+L N+SCN +L VDLSSNLLTG LP CL + R VLY++NCL +Q Q P
Sbjct: 294 NKLTGMLFGNLSCNSELEVVDLSSNLLTGSLPKCLVSNSIDRTVLYARNCLETTKQNQQP 353
Query: 371 SNFCQNEALAVKVLPHKQKNKSSY----ASSVVGGTVGGIAVVGAVLLVVKKVYNKNNNK 426
C EALAV +LP ++K K A +VGGT+GG+A+V +L +V++ +K
Sbjct: 354 PPSCHTEALAVGILPDRKKKKQVSKVVLALGIVGGTLGGVALVLLILFIVRR--GNARSK 411
Query: 427 VETTSTRFILENVSTINTVKLLSDARYISETMKMGA-SLPAYRTFTLDELKEATDCFDSS 485
++ TR I EN ++ T KLLSDARYIS+T K GA LP YR+F+L+E++ AT+ FD++
Sbjct: 412 MKNPPTRLISENAASGYTSKLLSDARYISQTKKFGALGLPTYRSFSLEEIEAATNNFDTA 471
Query: 486 SFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHC 545
S M + S+G++Y+G+L +G++V IR +KM K+ S + +H+ELISKLRH +LVSALGHC
Sbjct: 472 SLMGEDSYGEMYRGQLKNGSIVVIRCIKMKKRYSTQNFMHHMELISKLRHRHLVSALGHC 531
Query: 546 LDFSLDDPSISIIYLIFEYAPNETLRSFISG--PGYKLTWVQRIAAAIAIVKGVQFLHTG 603
SL+D S+S I+L+FEY PN TLRS+ S G L W QRI AAI + KG+QFLHTG
Sbjct: 532 FKCSLEDSSVSKIFLVFEYVPNGTLRSWTSDGHTGRSLNWTQRIGAAIGVAKGIQFLHTG 591
Query: 604 IVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQD 663
IVPGV+SNN+KI D+LLD N KI+SYNLPLL+ S +K +S+ R + +
Sbjct: 592 IVPGVYSNNIKIEDILLDHNLVAKISSYNLPLLSNIGKVRRGNSSDGSKHSSINKRGKHE 651
Query: 664 DKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDE-ARKSIVDPAVMNECSDE 722
DK D+YD G+IL+EII+GR I + N KDLLQ ++G DE AR+SIVDPA+ C ++
Sbjct: 652 DKCDIYDFGVILLEIILGRTIKTTNDAEAFKDLLQTSLGADEDARRSIVDPAIRKACLEQ 711
Query: 723 SLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759
SLK M E+C+RC+ EP +RPS+ED LWNLQFA Q+Q
Sbjct: 712 SLKTMTEICVRCMIKEPAERPSIEDVLWNLQFAAQVQ 748
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|145308448|gb|ABP57459.1| receptor-like kinase 17 precursor [Solanum chacoense] | Back alignment and taxonomy information |
|---|
Score = 787 bits (2033), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/769 (54%), Positives = 546/769 (71%), Gaps = 20/769 (2%)
Query: 1 MAKPVD-KLHLLVFIILSIIVSAPHSNQLQLFQYQTLVRIQQLLNYPSVSSSFNTTTVTD 59
MAK V LLVF++ ++ L+ Q + +V+I+QLLN+P SS++ T D
Sbjct: 3 MAKTVQGSCWLLVFMVF--LLFNLSDEFLEPSQSEAIVKIKQLLNFPQDLSSWSDNT--D 58
Query: 60 FCNIEPTPSLTLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSL 119
FCN EP +LTL+CYEDN+TQLHI+G N L FSTDT FS L L +LKVLSL
Sbjct: 59 FCNSEPNTALTLMCYEDNITQLHISG---YNWFPNLPQGFSTDTLFSNLALLPNLKVLSL 115
Query: 120 VSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSE 179
VSLGL G LP I SSLEI+N+SSN+ G IP +IS L++LQTLILDDNKFTG VP
Sbjct: 116 VSLGLRGTLPKKIGFLSSLEIINISSNFFYGEIPGEISYLKSLQTLILDDNKFTGQVPEG 175
Query: 180 LSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQ 239
+ LL LSVLS KNNS SG LP SL+ LQ+LR++S+S N+ SG +P+L NL NL+V D++
Sbjct: 176 VDLLHSLSVLSFKNNSFSGSLPNSLSNLQTLRILSISGNNFSGVVPNLHNLSNLQVLDLE 235
Query: 240 DNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLS 299
N GP FP + K+V+LVLR N+F G+ P EL S QL+KLDIS N VGPF P++LS
Sbjct: 236 SNNLGPNFPNIPTKLVSLVLRKNKFSLGV-PKELSSCYQLKKLDISSNELVGPFSPTVLS 294
Query: 300 LPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKN 359
LPS++YLDI GNKLTG LL+N++C+ L+FV+LSSN LTG LP CL+ + +++VL+S N
Sbjct: 295 LPSLSYLDISGNKLTGKLLKNVTCSQDLSFVNLSSNYLTGELPDCLKPSSSSKIVLFSGN 354
Query: 360 CLSNEEQEQHPSNFCQNEALAVKVLPH-----KQKNKSSYASSVVGGTVGGIAVVGAVLL 414
CLSN+EQ QHP +FC NEALAV + PH K+ ASS++GG VG +A+VG L+
Sbjct: 355 CLSNKEQWQHPYSFCHNEALAVSIEPHKGKVKGGNGKAVLASSMIGGFVGVVAIVGLALV 414
Query: 415 VVKKVYNKNNNKVETTSTRFILENVSTINTVKLLSDARYISETMKMG-ASLPAYRTFTLD 473
VV++ Y K + TR ILE VS +T+KLL+DARY+SET K+G P YRTF LD
Sbjct: 415 VVRREYAK-QKACQAPQTRLILEKVSPAHTLKLLNDARYLSETRKLGLLGAPPYRTFVLD 473
Query: 474 ELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKL 533
EL+EAT+ FD S+ + +S GQIYKG+LTDGT+VAI+S+KM K+ S YT+ + ISK+
Sbjct: 474 ELREATNNFDISNLIGASSSGQIYKGRLTDGTVVAIKSIKMRKRHSVQSYTHQLGRISKI 533
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFIS--GPGYKLTWVQRIAAAI 591
R+ +LVS +GHC + DD S+S I L+FE+ PN TLR IS K TW QR++AAI
Sbjct: 534 RYCHLVSTIGHCFECYQDDSSVSRICLVFEFVPNVTLRGVISEANSAQKFTWTQRMSAAI 593
Query: 592 AIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPA 651
I KG+QFLHTGIVPG+FSN LKITDVLLD+NFHVKI+ YNL LL E + K A SS
Sbjct: 594 GIAKGIQFLHTGIVPGIFSNQLKITDVLLDQNFHVKISKYNLSLLIENK-KMDAGPSSSG 652
Query: 652 KKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDE-ARKSI 710
K + R + ++K DVYD G+IL+EII GR I ++N + + KD+L V++ DE R++I
Sbjct: 653 SKGNDGQRLKYEEKDDVYDFGVILLEIISGRTIDTKNDIDVSKDILIVSLTADEIGRRNI 712
Query: 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759
+DPAV ECSD SL+ +MELC++CLS+EP RPSVED +WNLQFA Q+Q
Sbjct: 713 IDPAVRKECSDSSLRTLMELCIKCLSDEPSQRPSVEDLIWNLQFAAQVQ 761
|
Source: Solanum chacoense Species: Solanum chacoense Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356565741|ref|XP_003551096.1| PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770-like, partial [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 783 bits (2022), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/751 (55%), Positives = 534/751 (71%), Gaps = 27/751 (3%)
Query: 25 SNQLQLFQYQTLVRIQQLLNYPSVSSSFNTTTVTDFCNIEPTPSLTLVCYEDNLTQLHIA 84
S QLQ +TL+RIQQ LN+P V SS+N T DFC+ + T SLT+VCYE +TQLHI
Sbjct: 4 STQLQSSDSKTLLRIQQQLNFPPVLSSWNKNT--DFCSTDSTSSLTVVCYEGTITQLHIV 61
Query: 85 GDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLS 144
G+ + L NFS D+F TL L SLKVL+LVSLG+WGPLPG IAH SSLEI+N+S
Sbjct: 62 GETRALL---LPRNFSIDSFVRTLVRLPSLKVLTLVSLGIWGPLPGKIAHLSSLEIVNVS 118
Query: 145 SNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSL 204
SN+L GSIP+Q S L +LQTLILDDN F+G +P L L+VLSLKNN + LP SL
Sbjct: 119 SNFLYGSIPLQFSLLSHLQTLILDDNMFSGHLPEWLDSFPALTVLSLKNNLFNSSLPDSL 178
Query: 205 TGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRF 264
L++LR++SLS NH G +PDL L NL+V ++ DN FGPRFP+L K+VT+VLRNN+F
Sbjct: 179 NSLENLRILSLSHNHFYGPVPDLGRLANLQVLELDDNAFGPRFPQLGDKLVTIVLRNNKF 238
Query: 265 QFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCN 324
+ + PDE+ SY QL+KLDIS N FVGPF +LLSLPSITY++I GNKLTG+L +N+SCN
Sbjct: 239 RSSI-PDEVSSYYQLEKLDISANTFVGPFQLALLSLPSITYVNISGNKLTGMLFENLSCN 297
Query: 325 PQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSNEEQEQHPSNFCQNEALAVKVL 384
P L VDLSSNLLTG LP CL + R VLY++NCL Q QH FC EA+AV ++
Sbjct: 298 PGLEAVDLSSNLLTGSLPKCLMSNSNDRTVLYARNCLET-NQNQHALPFCHTEAIAVGIV 356
Query: 385 P----HKQKNKSSYASSVVGGTVGGIAVVGAVLLVVKKVYNKNNNKVETTSTRFILENVS 440
P HK+ +K + +V GT GG+A+V + ++++ K +K++ T+ I EN +
Sbjct: 357 PEGKKHKRVSKEVLSIGIVCGTFGGVAIVALLFFIIRRESVK--SKIKNPPTKLISENAA 414
Query: 441 TINTVKLLSDARYISETMKMGA-SLPAYRTFTLDELKEATDCFDSSSFMCDASHGQIYKG 499
+ T KL+SDARYIS+TMK G LP YR F+L+E+ AT+ FDS+SFM + S G++++G
Sbjct: 415 SGYTSKLISDARYISQTMKFGTVGLPPYRVFSLEEIVAATNNFDSASFMGEGSQGKMHRG 474
Query: 500 KLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559
+L DG LVAIRS+KM++ S + ++IE ISK RH +LVS LGHC + LDD S+S I+
Sbjct: 475 QLKDGLLVAIRSVKMNRSYSTQDFMHNIEQISKYRHRHLVSVLGHCFECYLDDSSVSSIF 534
Query: 560 LIFEYAPNETLRSFISGPGYK--LTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITD 617
++FEY PN TL+S+IS Y+ LTW+QRI A I + KG+QFLHTGIVPGV+SNNLKITD
Sbjct: 535 VVFEYVPNGTLKSWISDGHYRKSLTWMQRIEATIGVAKGIQFLHTGIVPGVYSNNLKITD 594
Query: 618 VLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLAR--------TEQDDKSDVY 669
VLLD+NF KI+SY+LPLL+ R K SP + S AR + +DKSDVY
Sbjct: 595 VLLDQNFVAKISSYDLPLLSYTR-KNDFSKYSPLRFLSSWARYPFLWMQKVKHEDKSDVY 653
Query: 670 DIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTD-EARKSIVDPAVMNECSDESLKRMM 728
D G+IL+E+I+GR I S NV L KDLLQ +I T+ EAR+SI+DPAV C D+SLK MM
Sbjct: 654 DFGVILLELILGRTIKSRNVDTL-KDLLQASITTNGEARRSIIDPAVRKACLDQSLKTMM 712
Query: 729 ELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759
E+C+RCL E +RPS+ED LWNLQFA Q+Q
Sbjct: 713 EICVRCLVKEQAERPSIEDVLWNLQFAAQVQ 743
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 769 | ||||||
| TAIR|locus:2079339 | 802 | AT3G03770 [Arabidopsis thalian | 0.797 | 0.764 | 0.484 | 1.8e-161 | |
| TAIR|locus:2167326 | 680 | AT5G63410 [Arabidopsis thalian | 0.403 | 0.455 | 0.377 | 4.1e-87 | |
| TAIR|locus:2181017 | 951 | AT5G01950 [Arabidopsis thalian | 0.373 | 0.301 | 0.310 | 1.4e-43 | |
| TAIR|locus:2084016 | 937 | AT3G53590 [Arabidopsis thalian | 0.356 | 0.292 | 0.299 | 7e-41 | |
| TAIR|locus:2157002 | 857 | AT5G49780 [Arabidopsis thalian | 0.371 | 0.333 | 0.278 | 1.8e-37 | |
| TAIR|locus:2170483 | 1173 | FLS2 "FLAGELLIN-SENSITIVE 2" [ | 0.381 | 0.249 | 0.242 | 9.1e-36 | |
| TAIR|locus:2156992 | 946 | AT5G49770 [Arabidopsis thalian | 0.401 | 0.326 | 0.259 | 1.1e-35 | |
| TAIR|locus:2019863 | 971 | AT1G79620 [Arabidopsis thalian | 0.384 | 0.304 | 0.266 | 1.1e-34 | |
| TAIR|locus:2161158 | 1041 | PXY "PHLOEM INTERCALATED WITH | 0.360 | 0.266 | 0.249 | 8.3e-34 | |
| TAIR|locus:2009630 | 953 | AT1G53420 [Arabidopsis thalian | 0.356 | 0.287 | 0.276 | 1.3e-33 |
| TAIR|locus:2079339 AT3G03770 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1443 (513.0 bits), Expect = 1.8e-161, Sum P(2) = 1.8e-161
Identities = 302/623 (48%), Positives = 400/623 (64%)
Query: 150 GSIPVQISSLRNLQTLILDDNKFTGAVPXXXXXXXXXXXXXXXXXXXXGFLPVSLTGLQS 209
G IP ++SSL LQTLILD+N F+G +P G LP SL+ L
Sbjct: 143 GPIPHELSSLATLQTLILDENMFSGELPDWIDSLPSLAVLSLRKNVLNGSLPSSLSSLSG 202
Query: 210 LRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLN 269
LRV++L+ N +G +PDL +L NL+V D++ N FGP FPRL K+VTL+L N+F+ ++
Sbjct: 203 LRVLALANNRFNGALPDLSHLTNLQVLDLEGNSFGPLFPRLSNKLVTLILSKNKFRSAVS 262
Query: 270 PDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAF 329
+E+ S QLQ LD+S N FVGPF SL+SLP+ITYL+I NKLTG L N+SCN QL F
Sbjct: 263 AEEVSSLYQLQHLDLSYNTFVGPFPTSLMSLPAITYLNISHNKLTGRLSANLSCNSQLMF 322
Query: 330 VDLSSNLLTGYLPSCLQVEAKT-RLVLYSKNCLSNEEQEQHPSNFCQNEALAVKVLPHKQ 388
VD+SSNLLTG LP+CL+ + T R V+Y+ NCL+ ++Q P +FC NEALAV +LP ++
Sbjct: 323 VDMSSNLLTGSLPTCLKPSSGTSRDVVYASNCLATTNEDQRPVSFCSNEALAVGILPQRR 382
Query: 389 KNKSSYASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETTSTRFILENVSTINTVKLL 448
S + +S R I EN S T KLL
Sbjct: 383 NKVSKVGIALGVTASILGVLLLAGALFVVLRRLNAKKTVTKSSPRLIRENASMGYTSKLL 442
Query: 449 SDARYISETMKMGA-SLPAYRTFTLDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLV 507
SDARYIS+TMK+G LPAYRTF+L+EL+ AT+ F+SS+FM + S GQIY+G+L DG+ V
Sbjct: 443 SDARYISQTMKLGGLGLPAYRTFSLEELEYATNNFESSAFMGEGSQGQIYRGRLKDGSFV 502
Query: 508 AIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPN 567
AIR LKM K S +HIELI+KLRH +LVS LGHC + LDD ++S ++ +FEY PN
Sbjct: 503 AIRCLKMKKSCSTQNLMHHIELIAKLRHRHLVSVLGHCFECYLDDSTVSRMFFVFEYVPN 562
Query: 568 ETLRSFISGP--GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH 625
LR++IS G LTW QRI+ AI + KG+QFLHTGIVPGV+ NNLK+TD+LLD N
Sbjct: 563 GELRTWISDGHMGRLLTWEQRISVAIGVAKGIQFLHTGIVPGVYDNNLKMTDILLDNNLA 622
Query: 626 VKINSYNLPLLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDXXXXXXXXXXXXXX 684
K++SYNLPLL E GK G S K T + + +DK D+YD
Sbjct: 623 AKLSSYNLPLLVEGLGKVGQVGSRSGPKGTPSI---KDEDKIDIYDFGVILLELIVGRPL 679
Query: 685 TSENVVVLVKDLLQVNIGTDE-ARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRP 743
+++ V ++K+ LQ +I D+ AR+S+VDP V CSD+SLK MME+C+RCL +P +RP
Sbjct: 680 RAKSQVDVLKEQLQASISADDGARRSMVDPTVHRACSDQSLKTMMEICVRCLLKDPLERP 739
Query: 744 SVEDTLWNLQFATQIQ-GLKENN 765
S+ED LWNLQFA+Q+Q G +N+
Sbjct: 740 SIEDVLWNLQFASQVQEGWLQNS 762
|
|
| TAIR|locus:2167326 AT5G63410 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 546 (197.3 bits), Expect = 4.1e-87, Sum P(3) = 4.1e-87
Identities = 123/326 (37%), Positives = 191/326 (58%)
Query: 446 KLLSDARYISETMKMGAS-LPAYRTFTLDELKEATDCFDSSSFMCDAS-HGQIYKGKLTD 503
++LS+ARYISET K G+ LP R F+L+E+ +AT FD + + ++S +G +YKG L +
Sbjct: 365 EILSNARYISETSKFGSEDLPVCRQFSLEEIVKATKNFDKTMILGESSLYGTLYKGNLEN 424
Query: 504 GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFS-LDDPSISIIYLIF 562
GT VAIR L SKK S ++L++KLRH NLV LGHC+D DD S+ ++LI+
Sbjct: 425 GTKVAIRCLPSSKKYSIRNLKLRLDLLAKLRHPNLVCLLGHCIDCGGKDDYSVEKVFLIY 484
Query: 563 EYAPNETLRSFIS--GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLL 620
EY PN +S +S G + W +R+ + K V FLHTG++PG FSN LK +VLL
Sbjct: 485 EYIPNGNFQSCLSDNSSGKGMNWSERLNVLTGVAKAVHFLHTGVIPGFFSNRLKTNNVLL 544
Query: 621 DENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDXXXXXXXXXX 680
+++ K++ Y L +++EA + + E++ K+ ++R E D VY
Sbjct: 545 NQHRFAKLSDYGLSIVSEAT-RHNTEIA----KSWQMSRLEDD----VYSFGLILLQSIV 595
Query: 681 XXXXTSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPK 740
++ L +L ++ ++E R+ +V+P V C + SL R++ L +C+S E
Sbjct: 596 GPSVSAREEAFLRDEL--ASLESEEGRRRMVNPTVQATCRNGSLIRVITLMNKCVSPESL 653
Query: 741 DRPSVEDTLWNLQFATQIQGLKENNQ 766
RPS ED LWNLQ+A+Q+Q + +Q
Sbjct: 654 SRPSFEDILWNLQYASQLQAASDGDQ 679
|
|
| TAIR|locus:2181017 AT5G01950 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 325 (119.5 bits), Expect = 1.4e-43, Sum P(2) = 1.4e-43
Identities = 97/312 (31%), Positives = 151/312 (48%)
Query: 468 RTFTLDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHI 527
R F+ EL EATD F SS+ + +G++Y+G L+D T+ AI+ + I
Sbjct: 612 RGFSFKELAEATDDFSSSTLVGRGGYGKVYRGVLSDNTVAAIKRADEGSLQGEKEFLNEI 671
Query: 528 ELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYK-LTWVQR 586
EL+S+L H NLVS +G+C D+ S + L++E+ N TLR ++S G + L++ R
Sbjct: 672 ELLSRLHHRNLVSLIGYC-----DEESEQM--LVYEFMSNGTLRDWLSAKGKESLSFGMR 724
Query: 587 IAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA---EARGKG 643
I A+ KG+ +LHT P VF ++K +++LLD NF+ K+ + L LA E
Sbjct: 725 IRVALGAAKGILYLHTEANPPVFHRDIKASNILLDPNFNAKVADFGLSRLAPVLEDEEDV 784
Query: 644 SAEVSSPAKKTSVLARTEQ------DDKSDVYDXXXXXXXXXXXXXXTS--ENVVVLVKD 695
VS+ + T E DKSDVY S +N+V VK
Sbjct: 785 PKHVSTVVRGTPGYLDPEYFLTHKLTDKSDVYSIGVVFLELLTGMHAISHGKNIVREVKT 844
Query: 696 LLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755
Q ++ S++D M S ES+++ L LRC + P+ RP + + + L+
Sbjct: 845 AEQRDMMV-----SLIDKR-MEPWSMESVEKFAALALRCSHDSPEMRPGMAEVVKELESL 898
Query: 756 TQIQGLKENNQE 767
Q +E E
Sbjct: 899 LQASPDRETRVE 910
|
|
| TAIR|locus:2084016 AT3G53590 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 301 (111.0 bits), Expect = 7.0e-41, Sum P(2) = 7.0e-41
Identities = 89/297 (29%), Positives = 147/297 (49%)
Query: 468 RTFTLDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHI 527
+ F+ EL +AT+ FDSS+ + S+G++YKG L++ T VAI+ + + S + I
Sbjct: 600 KKFSFVELSDATNGFDSSTLIGRGSYGKVYKGILSNKTEVAIKRGEETSLQSEKEFLNEI 659
Query: 528 ELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYK-LTWVQR 586
+L+S+L H NLVS +G+ D I L++EY PN +R ++S L++ R
Sbjct: 660 DLLSRLHHRNLVSLIGYSSD-------IGEQMLVYEYMPNGNVRDWLSANAADTLSFSMR 712
Query: 587 IAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAE 646
A+ KG+ +LHT P V ++K +++LLD H K+ + L LA A G+G E
Sbjct: 713 SHVALGSAKGILYLHTEANPPVIHRDIKTSNILLDCQLHAKVADFGLSRLAPAFGEGDGE 772
Query: 647 ---VSSPAKKTSVLA-----RTEQ-DDKSDVYDXXXXXXXXXXXXXXTSENVVVLVKDLL 697
VS+ + T T+Q +SDVY E + ++++
Sbjct: 773 PAHVSTVVRGTPGYLDPEYFMTQQLTVRSDVYSFGVVLLELLTGMHPFFEGTHI-IREVR 831
Query: 698 QVN-IGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
N GT S+ D M +CS + +K++ EL L C + P+ RP + + L+
Sbjct: 832 TANECGTV---LSVADSR-MGQCSPDKVKKLAELALWCCEDRPETRPPMSKVVKELE 884
|
|
| TAIR|locus:2157002 AT5G49780 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 291 (107.5 bits), Expect = 1.8e-37, Sum P(2) = 1.8e-37
Identities = 86/309 (27%), Positives = 149/309 (48%)
Query: 468 RTFTLDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHI 527
+ FT +E+++ + F ++ + +GQ+YKG L G L+AI+ + + I
Sbjct: 520 KAFTFEEMRKCANNFSVANDVGGGGYGQVYKGILPSGQLIAIKRAQPGSLQGALEFKTEI 579
Query: 528 ELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGP-GYKLTWVQR 586
EL+S++ H N+V LG C D L++EY PN +LR +SG G +L W +R
Sbjct: 580 ELLSRVHHKNVVKLLGFCFDRGEQ-------MLVYEYIPNGSLRDSLSGKSGIRLDWTRR 632
Query: 587 IAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAE 646
+ A+ KG+ +LH P + ++K ++VLLDE+ K+ + L L E K A
Sbjct: 633 LRIALGSGKGLAYLHELADPPIIHRDVKSSNVLLDESLTAKVADFGLSQLVEDAEK--AN 690
Query: 647 VSSPAKKTSVLA-----RTEQ-DDKSDVYDXXXXXXXXXXXXXXTSENVVVLVKDL-LQV 699
V++ K T T Q +KSDVY EN +VK++ +++
Sbjct: 691 VTAQVKGTMGYLDPEYYMTNQLTEKSDVYGFGVMMLELLTGKIPI-ENGKYVVKEMKMKM 749
Query: 700 NIGTD-EARKSIVDPAVMNECSDESLK---RMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755
N + + +D + + S+ +LK + +++ LRC+ E RPS+ + + ++
Sbjct: 750 NKSKNLYDLQDFLDTTI-SATSNRNLKGFEKYVDVALRCVDPEGVKRPSMNEVVKEIENI 808
Query: 756 TQIQGLKEN 764
Q GL N
Sbjct: 809 MQYAGLNPN 817
|
|
| TAIR|locus:2170483 FLS2 "FLAGELLIN-SENSITIVE 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 239 (89.2 bits), Expect = 9.1e-36, Sum P(2) = 9.1e-36
Identities = 78/321 (24%), Positives = 155/321 (48%)
Query: 468 RTFTLDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKM---SKKSSPHMYT 524
+ F EL++ATD F+S++ + +S +YKG+L DGT++A++ L + S +S YT
Sbjct: 856 KRFEPKELEQATDSFNSANIIGSSSLSTVYKGQLEDGTVIAVKVLNLKEFSAESDKWFYT 915
Query: 525 YHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKL-TW 583
+ +S+L+H NLV LG F+ + L+ + N L I G + +
Sbjct: 916 -EAKTLSQLKHRNLVKILG----FAWESGKTKA--LVLPFMENGNLEDTIHGSAAPIGSL 968
Query: 584 VQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKG 643
+++I + I G+ +LH+G + +LK ++LLD + ++ + + R G
Sbjct: 969 LEKIDLCVHIASGIDYLHSGYGFPIVHCDLKPANILLDSDRVAHVSDFGTARILGFREDG 1028
Query: 644 SAEVSSPAKKTSV--LA-----RTEQDDKSDVYDXXXXXXXXXXXXXXTSENVV----VL 692
S S+ A + ++ LA + K+DV+ TS N +
Sbjct: 1029 STTASTSAFEGTIGYLAPEFAYMRKVTTKADVFSFGIIMMELMTKQRPTSLNDEDSQDMT 1088
Query: 693 VKDLLQVNIGTD-EARKSIVD----PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVED 747
++ L++ +IG + ++D ++++ +E+++ ++LCL C S+ P+DRP + +
Sbjct: 1089 LRQLVEKSIGNGRKGMVRVLDMELGDSIVSLKQEEAIEDFLKLCLFCTSSRPEDRPDMNE 1148
Query: 748 TLWNL-QFATQIQGLKENNQE 767
L +L + + +E+ E
Sbjct: 1149 ILTHLMKLRGKANSFREDRNE 1169
|
|
| TAIR|locus:2156992 AT5G49770 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 295 (108.9 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 85/328 (25%), Positives = 152/328 (46%)
Query: 451 ARYISETMKMGA-SLPAYRTFTLDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAI 509
A++ + +M A L + FT +EL + T+ F ++ + +GQ+YKG L +G ++AI
Sbjct: 602 AKWDAGKNEMDAPQLMGTKAFTFEELSKCTNNFSDANDVGGGGYGQVYKGTLPNGQVIAI 661
Query: 510 RSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNET 569
+ + + IEL+S++ H N+V LG C D L++EY PN +
Sbjct: 662 KRAQQGSMQGAFEFKTEIELLSRVHHKNVVKLLGFCFDQKEQ-------MLVYEYIPNGS 714
Query: 570 LRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKI 628
LR +SG G KL W +R+ A+ KG+ +LH P + ++K ++LLDE+ K+
Sbjct: 715 LRDGLSGKNGVKLDWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLDEHLTAKV 774
Query: 629 NSYNLPLLAEARGKGSAEVSSPAKKTSVLA-----RTEQ-DDKSDVYDXXXXXXXXXXXX 682
+ L L K A V++ K T T Q +KSDVY
Sbjct: 775 ADFGLSKLVGDPEK--AHVTTQVKGTMGYLDPEYYMTNQLTEKSDVYGFGVVMLELLTGK 832
Query: 683 XXTSEN--VVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPK 740
VV VK + + + ++ + + N + + ++ +++ L+C+ E
Sbjct: 833 SPIDRGSYVVKEVKKKMDKSRNLYDLQELLDTTIIQNSGNLKGFEKYVDVALQCVEPEGV 892
Query: 741 DRPSVEDTLWNLQFATQIQGLKENNQEA 768
+RP++ + + L+ ++ GL N A
Sbjct: 893 NRPTMSEVVQELESILRLVGLNPNADSA 920
|
|
| TAIR|locus:2019863 AT1G79620 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 295 (108.9 bits), Expect = 1.1e-34, Sum P(2) = 1.1e-34
Identities = 84/315 (26%), Positives = 146/315 (46%)
Query: 461 GA-SLPAYRTFTLDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSS 519
GA L R F+ +ELK+ T+ F SS + +G++YKG L DG +VAI+ +
Sbjct: 616 GAPQLKGARWFSYEELKKITNNFSVSSELGYGGYGKVYKGMLQDGHMVAIKRAQQGSTQG 675
Query: 520 PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISG-PG 578
+ IEL+S++ H NLV +G C + I L++EY N +L+ ++G G
Sbjct: 676 GLEFKTEIELLSRVHHKNLVGLVGFCFE---QGEQI----LVYEYMSNGSLKDSLTGRSG 728
Query: 579 YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638
L W +R+ A+ +G+ +LH P + ++K T++LLDEN K+ + L L
Sbjct: 729 ITLDWKRRLRVALGSARGLAYLHELADPPIIHRDVKSTNILLDENLTAKVADFGLSKLVS 788
Query: 639 ARGKGSAEVSSPAKKT------SVLARTEQDDKSDVYDXXXXXXXXXXXXXXTSENVVVL 692
KG VS+ K T + +KSDVY + ++
Sbjct: 789 DCTKG--HVSTQVKGTLGYLDPEYYTTQKLTEKSDVYSFGVVMMELITAKQPIEKGKYIV 846
Query: 693 VKDLLQVNIGTDE--ARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLW 750
+ L +N D+ + +D ++ + + L R MEL L+C+ +RP++ + +
Sbjct: 847 REIKLVMNKSDDDFYGLRDKMDRSLRDVGTLPELGRYMELALKCVDETADERPTMSEVVK 906
Query: 751 NLQFATQIQGLKENN 765
++ Q G ++
Sbjct: 907 EIEIIIQNSGASSSS 921
|
|
| TAIR|locus:2161158 PXY "PHLOEM INTERCALATED WITH XYLEM" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 237 (88.5 bits), Expect = 8.3e-34, Sum P(2) = 8.3e-34
Identities = 75/301 (24%), Positives = 132/301 (43%)
Query: 470 FTLDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHM------Y 523
FT D++ E D+ M S G +YK ++ +G ++A++ L K + +
Sbjct: 709 FTADDVVECLSKTDNILGM--GSTGTVYKAEMPNGEIIAVKKLWGKNKENGKIRRRKSGV 766
Query: 524 TYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLT- 582
++++ +RH N+V LG C + D ++ L++EY PN +L + G +T
Sbjct: 767 LAEVDVLGNVRHRNIVRLLGCCTN---RDCTM----LLYEYMPNGSLDDLLHGGDKTMTA 819
Query: 583 ---WVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEA 639
W AI + +G+ +LH P + +LK +++LLD +F ++ + + L +
Sbjct: 820 AAEWTALYQIAIGVAQGICYLHHDCDPVIVHRDLKPSNILLDADFEARVADFGVAKLIQT 879
Query: 640 RGKGSAEVSSPAKKTSVLARTEQ-DDKSDVYDXXXXXXXXXXXXXXTSENVVV--LVKDL 696
S S A T Q D KSD+Y + D
Sbjct: 880 DESMSVVAGSYGYIAPEYAYTLQVDKKSDIYSYGVILLEIITGKRSVEPEFGEGNSIVDW 939
Query: 697 LQVNIGTDEARKSIVDPAVMNECS--DESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754
++ + T E + ++D ++ CS E +K+M+ + L C S P DRP + D L LQ
Sbjct: 940 VRSKLKTKEDVEEVLDKSMGRSCSLIREEMKQMLRIALLCTSRSPTDRPPMRDVLLILQE 999
Query: 755 A 755
A
Sbjct: 1000 A 1000
|
|
| TAIR|locus:2009630 AT1G53420 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 288 (106.4 bits), Expect = 1.3e-33, Sum P(2) = 1.3e-33
Identities = 82/297 (27%), Positives = 143/297 (48%)
Query: 469 TFTLDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIE 528
+F+L ++K AT+ FDS++ + + G +YKGKL DGT++A++ L K + I
Sbjct: 611 SFSLRQIKIATNNFDSANRIGEGGFGPVYKGKLFDGTIIAVKQLSTGSKQGNREFLNEIG 670
Query: 529 LISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPG---YKLTWVQ 585
+IS L H NLV G C++ + L++E+ N +L + GP +L W
Sbjct: 671 MISALHHPNLVKLYGCCVEGGQ-------LLLVYEFVENNSLARALFGPQETQLRLDWPT 723
Query: 586 RIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSA 645
R I + +G+ +LH + ++K T+VLLD+ + KI+ + L L E + S
Sbjct: 724 RRKICIGVARGLAYLHEESRLKIVHRDIKATNVLLDKQLNPKISDFGLAKLDE---EDST 780
Query: 646 EVSSPAKKT-SVLA-----RTEQDDKSDVYDXXXXXXXXXXXXXXT---SENVVVLVKDL 696
+S+ T +A R DK+DVY S+N + D
Sbjct: 781 HISTRIAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVHGRSNKIERSKNNTFYLIDW 840
Query: 697 LQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
++V + +VDP + +E + E M+++ + C S+EP +RPS+ + + L+
Sbjct: 841 VEV-LREKNNLLELVDPRLGSEYNREEAMTMIQIAIMCTSSEPCERPSMSEVVKMLE 896
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q8LFN2 | Y3037_ARATH | No assigned EC number | 0.5331 | 0.9154 | 0.8778 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 769 | |||
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 7e-38 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 3e-29 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 6e-29 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 3e-25 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 6e-20 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 8e-16 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 1e-14 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-13 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 2e-13 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 3e-13 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 3e-13 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 5e-13 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 5e-12 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 5e-12 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 1e-11 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 2e-11 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 4e-10 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 7e-10 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 9e-10 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 1e-09 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 3e-09 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 4e-09 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 4e-09 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 8e-09 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 1e-08 | |
| PHA02988 | 283 | PHA02988, PHA02988, hypothetical protein; Provisio | 3e-08 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 4e-08 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 5e-08 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 2e-07 | |
| cd07872 | 309 | cd07872, STKc_PCTAIRE2, Catalytic domain of the Se | 5e-07 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 5e-07 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 7e-07 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 7e-07 | |
| cd07856 | 328 | cd07856, STKc_Sty1_Hog1, Catalytic domain of the S | 1e-06 | |
| cd06637 | 272 | cd06637, STKc_TNIK, Catalytic domain of the Protei | 2e-06 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 3e-06 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 3e-06 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 3e-06 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 3e-06 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 5e-06 | |
| cd06636 | 282 | cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr | 6e-06 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 6e-06 | |
| cd00116 | 319 | cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribo | 1e-05 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 1e-05 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-05 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 2e-05 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 2e-05 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 2e-05 | |
| cd05096 | 304 | cd05096, PTKc_DDR1, Catalytic domain of the Protei | 2e-05 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 2e-05 | |
| cd00116 | 319 | cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribo | 3e-05 | |
| cd06917 | 277 | cd06917, STKc_NAK1_like, Catalytic domain of Funga | 4e-05 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 5e-05 | |
| cd05089 | 297 | cd05089, PTKc_Tie1, Catalytic domain of the Protei | 9e-05 | |
| cd07845 | 309 | cd07845, STKc_CDK10, Catalytic domain of the Serin | 9e-05 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 9e-05 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 1e-04 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 1e-04 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 1e-04 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-04 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 2e-04 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 2e-04 | |
| cd05047 | 270 | cd05047, PTKc_Tie, Catalytic domain of Tie Protein | 2e-04 | |
| cd06645 | 267 | cd06645, STKc_MAP4K3, Catalytic domain of the Prot | 2e-04 | |
| cd07871 | 288 | cd07871, STKc_PCTAIRE3, Catalytic domain of the Se | 2e-04 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 2e-04 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 3e-04 | |
| cd06631 | 265 | cd06631, STKc_YSK4, Catalytic domain of the Protei | 3e-04 | |
| cd05088 | 303 | cd05088, PTKc_Tie2, Catalytic domain of the Protei | 3e-04 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 4e-04 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 4e-04 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 4e-04 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 4e-04 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 5e-04 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 5e-04 | |
| cd05619 | 316 | cd05619, STKc_nPKC_theta, Catalytic domain of the | 6e-04 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 8e-04 | |
| cd06617 | 283 | cd06617, PKc_MKK3_6, Catalytic domain of the dual- | 8e-04 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 0.001 | |
| cd05058 | 262 | cd05058, PTKc_Met_Ron, Catalytic domain of the Pro | 0.001 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 0.001 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 0.001 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 0.002 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 0.003 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 0.003 | |
| cd06611 | 280 | cd06611, STKc_SLK_like, Catalytic domain of Ste20- | 0.003 | |
| cd07837 | 295 | cd07837, STKc_CdkB_plant, Catalytic domain of the | 0.003 | |
| cd05612 | 291 | cd05612, STKc_PRKX_like, Catalytic domain of PRKX- | 0.004 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 0.004 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 0.004 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 0.004 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 151 bits (384), Expect = 7e-38
Identities = 177/695 (25%), Positives = 284/695 (40%), Gaps = 107/695 (15%)
Query: 88 NNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNY 147
+N +G + N LG ++L VL L + L G +P + S +L L L SN
Sbjct: 341 SNKFSGEIPKN---------LGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNS 391
Query: 148 LSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGL 207
L G IP + + R+L+ + L DN F+G +PSE + L ++ L + NN+L G + +
Sbjct: 392 LEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDM 451
Query: 208 QSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLV---LRNNRF 264
SL+++SL+ N G +PD K L D+ N F PR + L+ L N+
Sbjct: 452 PSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKL 511
Query: 265 QFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCN 324
G PDEL S +L LD+S N+ G S +P ++ LD+ N+L+G + +N+
Sbjct: 512 S-GEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNV 570
Query: 325 PQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSNEEQEQHPSNFCQNEALAVKVL 384
L V++S N L G LPS A + L + +
Sbjct: 571 ESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDT-------------TSGLP 617
Query: 385 PHKQKNKSS----YASSVVGGTVGGIAVVGAVLLVVKKVYNKNNNKVE----TTSTRFIL 436
P K+ K+ Y + +G + +A+V + ++ N +VE T +F
Sbjct: 618 PCKRVRKTPSWWFYITCTLGAFL-VLALVAFGFVFIRGRNNLELKRVENEDGTWELQFFD 676
Query: 437 ENVSTINTVKLLSDARYISETMKMGASLPAYRTFTLDELKEATDCFDSSSFMCDASHGQI 496
VS T+ + L LKE + + G
Sbjct: 677 SKVSKSITINDI-----------------------LSSLKE-------ENVISRGKKGAS 706
Query: 497 YKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556
YKGK + + S P I + KL+H N+V +G C S
Sbjct: 707 YKGKSIKNGMQFVVKEINDVNSIPSSE---IADMGKLQHPNIVKLIGLC-------RSEK 756
Query: 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKIT 616
YLI EY + L + L+W +R AI I K ++FLH P V NL
Sbjct: 757 GAYLIHEYIEGKNLSEVLRN----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPE 812
Query: 617 DVLLDENFHVKIN-SYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIIL 675
+++D + S L + + S+ +P + + +KSD+Y G+IL
Sbjct: 813 KIIIDGKDEPHLRLSLPGLLCTDTKCFISSAYVAPETRE----TKDITEKSDIYGFGLIL 868
Query: 676 IEIIVGR-PITSENVV--VLVKDLLQVNIGTDEARKSI--------VDPAVMNECS--DE 722
IE++ G+ P +E V +V+ AR +DP++ + S
Sbjct: 869 IELLTGKSPADAEFGVHGSIVE----------WARYCYSDCHLDMWIDPSIRGDVSVNQN 918
Query: 723 SLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757
+ +M L L C + +P RP D L L+ A++
Sbjct: 919 EIVEVMNLALHCTATDPTARPCANDVLKTLESASR 953
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 124 bits (313), Expect = 3e-29
Identities = 93/274 (33%), Positives = 141/274 (51%), Gaps = 5/274 (1%)
Query: 95 LAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPV 154
L++N + + +GS SSLKVL L L G +P S+ + +SLE L L+SN L G IP
Sbjct: 147 LSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPR 206
Query: 155 QISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVS 214
++ +++L+ + L N +G +P E+ L L+ L L N+L+G +P SL L++L+ +
Sbjct: 207 ELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLF 266
Query: 215 LSANHLSGEIP-DLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLV---LRNNRFQFGLNP 270
L N LSG IP + +L+ L D+ DN P L ++ L L +N F G P
Sbjct: 267 LYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFT-GKIP 325
Query: 271 DELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFV 330
L S +LQ L + N+F G +L ++T LD+ N LTG + + + + L +
Sbjct: 326 VALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKL 385
Query: 331 DLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSNE 364
L SN L G +P L R V N S E
Sbjct: 386 ILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGE 419
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 123 bits (311), Expect = 6e-29
Identities = 87/258 (33%), Positives = 128/258 (49%), Gaps = 14/258 (5%)
Query: 89 NNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYL 148
NN++G + + +G L+SL L LV L GP+P S+ + +L+ L L N L
Sbjct: 222 NNLSGEIPYE---------IGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKL 272
Query: 149 SGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQ 208
SG IP I SL+ L +L L DN +G +P + LQ L +L L +N+ +G +PV+LT L
Sbjct: 273 SGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLP 332
Query: 209 SLRVVSLSANHLSGEIP-DLRNLKNLRVFDVQDNYFGPRFPRL---HKKMVTLVLRNNRF 264
L+V+ L +N SGEIP +L NL V D+ N P + L+L +N
Sbjct: 333 RLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSL 392
Query: 265 QFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCN 324
+ G P L + L+++ + N F G LP + +LDI N L G +
Sbjct: 393 E-GEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDM 451
Query: 325 PQLAFVDLSSNLLTGYLP 342
P L + L+ N G LP
Sbjct: 452 PSLQMLSLARNKFFGGLP 469
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 3e-25
Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 51/354 (14%)
Query: 10 LLVFIILSIIVSAPHSNQLQLFQYQTLVRIQQLLNYPSVS-SSFNTTTVTDFCNIEPTPS 68
+ + L + S H+ +L+L L+ + +N P S++N++ D C
Sbjct: 13 IFMLFFLFLNFSMLHAEELEL-----LLSFKSSINDPLKYLSNWNSSA--DVCLW----- 60
Query: 69 LTLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPL 128
+ C +N +++ + NI+G + S+ F L ++ ++L + L GP+
Sbjct: 61 QGITC--NNSSRVVSIDLSGKNISGKI----SSAIF-----RLPYIQTINLSNNQLSGPI 109
Query: 129 PGSIAH-SSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLS 187
P I SSSL LNLS+N +GSIP S+ NL+TL L +N +G +P+++ L
Sbjct: 110 PDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLK 167
Query: 188 VLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIP-DLRNLKNLRVFDVQDNYFGPR 246
VL L N L G +P SLT L SL ++L++N L G+IP +L +K+L+ Y G
Sbjct: 168 VLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWI-----YLG-- 220
Query: 247 FPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYL 306
NN G P E+ L LD+ N GP SL +L ++ YL
Sbjct: 221 -------------YNN--LSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYL 265
Query: 307 DIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCL-QVEAKTRLVLYSKN 359
++ NKL+G + ++ +L +DLS N L+G +P + Q++ L L+S N
Sbjct: 266 FLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNN 319
|
Length = 968 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 89.9 bits (224), Expect = 6e-20
Identities = 62/280 (22%), Positives = 107/280 (38%), Gaps = 63/280 (22%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYH-IELISKLRHSNLVSALGHCLDFS 549
S G++Y + G LVAI+ +K K I+++ KL+H N+V D
Sbjct: 11 SFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYDVFEDED 70
Query: 550 LDDPSISIIYLIFEYAPNETLRSFI-SGPGYKLTWVQRIAAAIAIVKGVQFLHT-GIV-- 605
+YL+ EY L + + I+ +++LH+ GIV
Sbjct: 71 -------KLYLVMEYCEGGDLFDLLKKRGRLSEDEARFYLR--QILSALEYLHSKGIVHR 121
Query: 606 ---PGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTS------- 655
P N +LLDE+ HVK+ + L + ++ K T+
Sbjct: 122 DLKP---EN------ILLDEDGHVKLADFGL----------ARQLDPGEKLTTFVGTPEY 162
Query: 656 ----VLARTEQDDKSDVYDIGIILIEIIVGRPI--TSENVVVLVKDLLQVNIGTDEARKS 709
VL D++ +G+IL E++ G+P + ++ L K IG +
Sbjct: 163 MAPEVLLGKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLLELFK-----KIGKPK---- 213
Query: 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTL 749
P + S E +L + L +P+ R + E+ L
Sbjct: 214 PPFPPPEWDISPE----AKDLIRKLLVKDPEKRLTAEEAL 249
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 76.5 bits (189), Expect = 8e-16
Identities = 57/275 (20%), Positives = 101/275 (36%), Gaps = 84/275 (30%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYH-IELISKLRHSNLVSALGHCLDFS 549
G +Y + G VAI+ +K SS IE++ KL H N+V
Sbjct: 5 GFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIV----KLYGVF 60
Query: 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLH-TGIVPGV 608
D+ + YL+ EY +L+ + KL+ + + + I++G+++LH GI+
Sbjct: 61 EDENHL---YLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHR- 116
Query: 609 FSNNLKITDVLLDE-NFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLART------- 660
+LK ++LLD N VK+ + L S ++S + T
Sbjct: 117 ---DLKPENILLDSDNGKVKLADFGL----------SKLLTSDKSLLKTIVGTPAYMAPE 163
Query: 661 ------EQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714
+KSD++ +G+IL E+
Sbjct: 164 VLLGKGYYSEKSDIWSLGVILYEL------------------------------------ 187
Query: 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTL 749
LK ++ + L +P+ RPS ++ L
Sbjct: 188 -------PELKDLIR---KMLQKDPEKRPSAKEIL 212
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 74.2 bits (183), Expect = 1e-14
Identities = 70/269 (26%), Positives = 118/269 (43%), Gaps = 43/269 (15%)
Query: 494 GQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYH--IELISKLRHSNLVSALGHCLDFSL 550
G +YK K G +VA++ LK + S T I ++ +L H N+V +D
Sbjct: 13 GTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVR----LIDAFE 68
Query: 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFS 610
D + YL+ EY L ++S G L+ + A+ I++G+++LH S
Sbjct: 69 DKDHL---YLVMEYCEGGDLFDYLSRGG-PLSEDEAKKIALQILRGLEYLH--------S 116
Query: 611 NN-----LKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTS-------VLA 658
N LK ++LLDEN VKI + L A+ K S+ +++ T +L
Sbjct: 117 NGIIHRDLKPENILLDENGVVKIADFGL---AKKLLKSSSSLTTFVG-TPWYMAPEVLLG 172
Query: 659 RTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNE 718
K DV+ +G+IL E++ G+P S ++ L++ +G + E
Sbjct: 173 GNGYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSSGSEE 232
Query: 719 CSDESLKRMMELCLRCLSNEPKDRPSVED 747
D L +CL+ +P RP+ E+
Sbjct: 233 AKD--------LIKKCLNKDPSKRPTAEE 253
|
Length = 260 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 73.7 bits (181), Expect = 2e-13
Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Query: 141 LNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFL 200
L L + L G IP IS LR+LQ++ L N G +P L + L VL L NS +G +
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 201 PVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLR--VFDVQDN 241
P SL L SLR+++L+ N LSG +P + L F+ DN
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDN 525
|
Length = 623 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 70.3 bits (173), Expect = 2e-13
Identities = 65/277 (23%), Positives = 113/277 (40%), Gaps = 64/277 (23%)
Query: 493 HGQIYKGKLTD-----GTLVAIRSLKMSKKSSPHMYTYH-IELISKLRHSNLVSALGHCL 546
G++YKGKL VA+++LK ++ KL H N+V LG C
Sbjct: 12 FGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNVVKLLGVCT 71
Query: 547 DFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVP 606
+ ++P +Y++ EY L S++ KL+ ++ A+ I +G+++L
Sbjct: 72 E---EEP----LYIVMEYMEGGDLLSYLRKNRPKLSLSDLLSFALQIARGMEYLE----- 119
Query: 607 GVFSNN-----LKITDVLLDENFHVKI-------NSYNLPLLAEARGKGSAEVSSPAKKT 654
S N L + L+ EN VKI + Y+ + GK P +
Sbjct: 120 ---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGK------LPIRWM 170
Query: 655 S--VLARTEQDDKSDVYDIGIILIEIIV--GRP---ITSENVVVLVKDLLQVNIGTDEAR 707
+ L + KSDV+ G++L EI +P +++E V+ +K
Sbjct: 171 APESLKEGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLEYLK--------NGYRL 222
Query: 708 KSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPS 744
C E + +L L+C + +P+DRP+
Sbjct: 223 PQ------PPNCPPE----LYDLMLQCWAEDPEDRPT 249
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 72.9 bits (179), Expect = 3e-13
Identities = 36/91 (39%), Positives = 53/91 (58%)
Query: 117 LSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAV 176
L L + GL G +P I+ L+ +NLS N + G+IP + S+ +L+ L L N F G++
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 177 PSELSLLQVLSVLSLKNNSLSGFLPVSLTGL 207
P L L L +L+L NSLSG +P +L G
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPAALGGR 513
|
Length = 623 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 70.3 bits (173), Expect = 3e-13
Identities = 70/285 (24%), Positives = 116/285 (40%), Gaps = 74/285 (25%)
Query: 494 GQIYKGKLTDG----TLVAIRSLKMSKKSSPHMYTYH--IELISKLRHSNLVSALGHCLD 547
G++YKGKL T VA+++LK S + ++ KL H N+V LG C +
Sbjct: 9 GEVYKGKLKGKDGKTTEVAVKTLK-EDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTE 67
Query: 548 FSLDDPSISIIYLIFEYAPNETLRSFI--------SGPGYKLTWVQRIAAAIAIVKGVQF 599
++P +YL+ EY L ++ S L+ ++ AI I KG+++
Sbjct: 68 ---EEP----LYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEY 120
Query: 600 LHT-GIVPGVFSNNLKITD-----VLLDENFHVKIN----SYNLPLLAEARGKGSAEVSS 649
L + V D L+ E+ VKI+ S ++ R K ++
Sbjct: 121 LASKKFVHR---------DLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKL-- 169
Query: 650 PAKKTS--VLARTEQDDKSDVYDIGIILIEIIV--GRP---ITSENVVVLVKD---LLQV 699
P + + L KSDV+ G++L EI P +++E V+ ++ L +
Sbjct: 170 PIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPK- 228
Query: 700 NIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPS 744
P C DE + EL L C +P+DRP+
Sbjct: 229 -------------PE---YCPDE----LYELMLSCWQLDPEDRPT 253
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 69.5 bits (171), Expect = 5e-13
Identities = 61/274 (22%), Positives = 114/274 (41%), Gaps = 46/274 (16%)
Query: 492 SHGQIYKGKLTD-GTLVAIRSLKMSKKSSPHMYTYH--IELISKLRHSNLVSALGHCLDF 548
S G +Y D G L+A++S+++S S + I ++S L+H N+V G D
Sbjct: 12 SFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERD- 70
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFI-SGPGYKLTWVQRIAAAIAIVKGVQFLHT-GIVP 606
+ + + EY +L S + +++ I++G+ +LH+ GIV
Sbjct: 71 ----EEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYT--RQILEGLAYLHSNGIVH 124
Query: 607 GVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTS---------VL 657
++K ++L+D + VK+ + A+ G E V+
Sbjct: 125 R----DIKGANILVDSDGVVKLADFGC-----AKRLGDIETGEGTGSVRGTPYWMAPEVI 175
Query: 658 ARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQV--NIGTDEARKSIVDPAV 715
E +D++ +G +IE+ G+P SE + + + IG+ I +
Sbjct: 176 RGEEYGRAADIWSLGCTVIEMATGKPPWSE-----LGNPMAALYKIGSSGEPPEIPE--- 227
Query: 716 MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTL 749
S+E K + CLR +PK RP+ ++ L
Sbjct: 228 --HLSEE-AKDFLRKCLR---RDPKKRPTADELL 255
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 66.4 bits (163), Expect = 5e-12
Identities = 73/285 (25%), Positives = 114/285 (40%), Gaps = 81/285 (28%)
Query: 494 GQIYKGKLTD-----GTLVAIRSLKMSKKSSPHMYT----YHIELISKLRHSNLVSALGH 544
G++YKG L T VA+ K K+ + ++ KL H N+V LG
Sbjct: 13 GEVYKGTLKGDGEGTETKVAV---KTLKEGASEEEREEFLEEASIMKKLSHPNIVRLLGV 69
Query: 545 CLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGI 604
C +P +Y++ EY P L F+ G KLT + A+ I KG+++L
Sbjct: 70 CTQ---GEP----LYIVTEYMPGGDLLDFLRKHGEKLTLKDLLQMALQIAKGMEYLE--- 119
Query: 605 VPGVFSNNLKITD-----VLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKT----- 654
S N D L+ EN VKI+ + L +R +
Sbjct: 120 -----SKNFVHRDLAARNCLVTENLVVKISDFGL-----SRDIYEDDYYRKRGGGKLPIK 169
Query: 655 -----SVLAR--TEQDDKSDVYDIGIILIEII-VGRP----ITSENVVVLVKD---LLQV 699
S+ T KSDV+ G++L EI +G +++E V+ L++D L +
Sbjct: 170 WMAPESLKDGKFTS---KSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLELLEDGYRLPR- 225
Query: 700 NIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPS 744
P C DE L +M L+C + +P+DRP+
Sbjct: 226 -------------PE---NCPDE-LYELM---LQCWAYDPEDRPT 250
|
Length = 258 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 66.6 bits (162), Expect = 5e-12
Identities = 67/285 (23%), Positives = 118/285 (41%), Gaps = 56/285 (19%)
Query: 474 ELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKL 533
E+K CF G+++ G T VAI++LK SP + +++ KL
Sbjct: 11 EVKLGQGCF-----------GEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKL 58
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKL-------TWVQR 586
RH LV ++P IY++ EY +L F+ G K +
Sbjct: 59 RHEKLVQLYA----VVSEEP----IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 110
Query: 587 IAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE-----ARG 641
IA+ +A V+ + ++H +L+ ++L+ EN K+ + L L E AR
Sbjct: 111 IASGMAYVERMNYVH---------RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 161
Query: 642 KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNI 701
+ A + ++ R KSDV+ GI+L E+ + +V +++L
Sbjct: 162 GAKFPIKWTAPEAALYGRFTI--KSDVWSFGILLTELTTKGRVPYPGMVN--REVL---- 213
Query: 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVE 746
D+ + P C E + + +L +C EP++RP+ E
Sbjct: 214 --DQVERGYRMP-----CPPECPESLHDLMCQCWRKEPEERPTFE 251
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 65.6 bits (161), Expect = 1e-11
Identities = 63/279 (22%), Positives = 110/279 (39%), Gaps = 65/279 (23%)
Query: 492 SHGQIYKGKLTDG-----TLVAIRSLKMSKKSSPHMYTYH-IELISKLRHSNLVSALGHC 545
+ G++YKG L VA+++LK ++ KL H N+V LG C
Sbjct: 11 AFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIVKLLGVC 70
Query: 546 LDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYK-LTWVQRIAAAIAIVKGVQFLHTGI 604
+ ++P + ++ EY P L ++ K L+ ++ A+ I +G+++L
Sbjct: 71 TE---EEP----LMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLE--- 120
Query: 605 VPGVFSNN-----LKITDVLLDENFHVKI-------NSYNLPLLAEARGKGSAEVSSPAK 652
S N L + L+ EN VKI + Y+ GK P +
Sbjct: 121 -----SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGK------LPIR 169
Query: 653 KTS--VLARTEQDDKSDVYDIGIILIEIIV--GRP---ITSENVVVLVKDLLQVNIGTDE 705
+ L + KSDV+ G++L EI P +++ V+ +K
Sbjct: 170 WMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEEPYPGMSNAEVLEYLK---------KG 220
Query: 706 ARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPS 744
R C E + +L L+C + +P+DRP+
Sbjct: 221 YRLPK-----PPNCPPE----LYKLMLQCWAEDPEDRPT 250
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 65.3 bits (160), Expect = 2e-11
Identities = 53/206 (25%), Positives = 97/206 (47%), Gaps = 32/206 (15%)
Query: 494 GQIYKGK-LTDGTLVAIRSLKMS--KKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550
GQ+YK + G LVA++ ++M K+ P I+L+ KLRH N+V L +
Sbjct: 13 GQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVR-----LKEIV 67
Query: 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFS 610
IY++FEY ++ L + P K T Q +++G+Q+LH+ G+
Sbjct: 68 TSKGKGSIYMVFEYMDHD-LTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSN---GILH 123
Query: 611 NNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTS------------VLA 658
++K +++L++ + +K+ + L AR + A T+ +L
Sbjct: 124 RDIKGSNILINNDGVLKLADFGL-----AR---PYTKRNSADYTNRVITLWYRPPELLLG 175
Query: 659 RTEQDDKSDVYDIGIILIEIIVGRPI 684
T + D++ +G IL E+ +G+PI
Sbjct: 176 ATRYGPEVDMWSVGCILAELFLGKPI 201
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 61.2 bits (149), Expect = 4e-10
Identities = 77/265 (29%), Positives = 120/265 (45%), Gaps = 44/265 (16%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553
G+++ G T VA+++LK SP + +++ KLRH LV C S ++P
Sbjct: 20 GEVWMGTWNGTTKVAVKTLK-PGTMSPEAFLQEAQIMKKLRHDKLVQLYAVC---SEEEP 75
Query: 554 SISIIYLIFEYAPNETLRSFI-SGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNN 612
IY++ EY +L F+ SG G KL Q + A I +G+ +L + +
Sbjct: 76 ----IYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLES---RNYIHRD 128
Query: 613 LKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSS--PAKKTSVLA----RTEQDDKS 666
L ++L+ EN KI + L L E + +A + P K T+ A R KS
Sbjct: 129 LAARNILVGENLVCKIADFGLARLIEDD-EYTAREGAKFPIKWTAPEAANYGRFTI--KS 185
Query: 667 DVYDIGIILIEIIV-GR-P---ITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSD 721
DV+ GI+L EI+ GR P +T+ V L QV G R C +
Sbjct: 186 DVWSFGILLTEIVTYGRVPYPGMTNREV------LEQVERGYRMPR--------PPNCPE 231
Query: 722 ESLKRMMELCLRCLSNEPKDRPSVE 746
E + +L L+C +P++RP+ E
Sbjct: 232 E----LYDLMLQCWDKDPEERPTFE 252
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 60.1 bits (145), Expect = 7e-10
Identities = 62/262 (23%), Positives = 110/262 (41%), Gaps = 39/262 (14%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553
G+++ G T VAI++LK P + +++ KLRH LV ++P
Sbjct: 20 GEVWMGTWNGTTKVAIKTLK-PGTMMPEAFLQEAQIMKKLRHDKLVPLYA----VVSEEP 74
Query: 554 SISIIYLIFEYAPNETLRSFI-SGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNN 612
IY++ E+ +L F+ G G L Q + A I G+ ++ +
Sbjct: 75 ----IYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIER---MNYIHRD 127
Query: 613 LKITDVLLDENFHVKINSYNLPLLAE-----ARGKGSAEVSSPAKKTSVLARTEQDDKSD 667
L+ ++L+ +N KI + L L E AR + A + ++ R KSD
Sbjct: 128 LRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI--KSD 185
Query: 668 VYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSD---ESL 724
V+ GI+L E++ + +V +++L+ V+ C ESL
Sbjct: 186 VWSFGILLTELVTKGRVPYPGMV--NREVLEQ-----------VERGYRMPCPQGCPESL 232
Query: 725 KRMMELCLRCLSNEPKDRPSVE 746
+M+LC + +P +RP+ E
Sbjct: 233 HELMKLCWK---KDPDERPTFE 251
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 59.5 bits (145), Expect = 9e-10
Identities = 48/204 (23%), Positives = 93/204 (45%), Gaps = 36/204 (17%)
Query: 494 GQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD 552
G++YK + G VAI+ +K+ K I+++ K +H N+V G + D
Sbjct: 14 GEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYG---SYLKKD 70
Query: 553 PSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAA-AIAIVKGVQFLHT-GIVPGVFS 610
++++ E+ +L+ + LT Q IA ++KG+++LH+ GI+
Sbjct: 71 E----LWIVMEFCSGGSLKDLLKSTNQTLTESQ-IAYVCKELLKGLEYLHSNGIIHR--- 122
Query: 611 NNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTS-----------VLAR 659
++K ++LL + VK+ + L SA++S + + V+
Sbjct: 123 -DIKAANILLTSDGEVKLIDFGL----------SAQLSDTKARNTMVGTPYWMAPEVING 171
Query: 660 TEQDDKSDVYDIGIILIEIIVGRP 683
D K+D++ +GI IE+ G+P
Sbjct: 172 KPYDYKADIWSLGITAIELAEGKP 195
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 60.8 bits (147), Expect = 1e-09
Identities = 74/311 (23%), Positives = 118/311 (37%), Gaps = 24/311 (7%)
Query: 48 VSSSFNTTTVTDFCNIEPTPSLTLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFST 107
+ SS + D + SL NL L N N + S
Sbjct: 62 LPSSLSRLLSLDLLSPSGISSLDGSENLLNLLPLPSLDLNLNRLRS----------NISE 111
Query: 108 LGSLSSLKVLSLVSLGLWGPLPGSIAHS-SSLEILNLSSNYLSGSIPVQISSLRNLQTLI 166
L L++L L L + + +P I S+L+ L+LS N + S+P + +L NL+ L
Sbjct: 112 LLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLD 169
Query: 167 LDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD 226
L N + +P LS L L+ L L N +S LP + L +L + LS N + +
Sbjct: 170 LSFNDLS-DLPKLLSNLSNLNNLDLSGNKISD-LPPEIELLSALEELDLSNNSIIELLSS 227
Query: 227 LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISL 286
L NLKNL ++ +N P + L + + L S L++LD+S
Sbjct: 228 LSNLKNLSGLELSNN-KLEDLPESIGNLSNLETLDLSNNQISSISSLGSLTNLRELDLSG 286
Query: 287 NRFV--------GPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLT 338
N + LL +T + + LL N+ N + + + S L +
Sbjct: 287 NSLSNALPLIALLLLLLELLLNLLLTLKALELKLNSILLNNNILSNGETSSPEALSILES 346
Query: 339 GYLPSCLQVEA 349
L
Sbjct: 347 LNNLWTLDNAL 357
|
Length = 394 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 58.6 bits (142), Expect = 3e-09
Identities = 64/280 (22%), Positives = 110/280 (39%), Gaps = 48/280 (17%)
Query: 494 GQIYKGKLT---DGT--LVAIRSLKMSKKSSPHMYTYH--IELISKLRHSNLVSALGHCL 546
G++ + D T VA++SL S + H + IE++ L H N+V G C
Sbjct: 18 GKVELCRYDPLGDNTGEQVAVKSLNHSGEEQ-HRSDFEREIEILRTLDHENIVKYKGVC- 75
Query: 547 DFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVP 606
+ P + LI EY P+ +LR ++ ++ + + + I KG+ +L +
Sbjct: 76 ----EKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGS---Q 128
Query: 607 GVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSP-----------AKKTS 655
+L ++L++ VKI+ + L + K V P +TS
Sbjct: 129 RYIHRDLAARNILVESEDLVKISDFGLAKVLP-EDKDYYYVKEPGESPIFWYAPECLRTS 187
Query: 656 VLARTEQDDKSDVYDIGIILIEIIV-GRPITS--ENVVVLVKDLLQVNIGTD-----EAR 707
+ SDV+ G+ L E+ G P S + ++ I T +
Sbjct: 188 KFSS-----ASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEG 242
Query: 708 KSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVED 747
+ + P C DE + +L C EP+DRPS D
Sbjct: 243 ERLPRPP---SCPDE----VYDLMKLCWEAEPQDRPSFAD 275
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 57.9 bits (140), Expect = 4e-09
Identities = 69/259 (26%), Positives = 108/259 (41%), Gaps = 33/259 (12%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553
G+++ G T VAI+SLK SP + L+ +L+H LV +P
Sbjct: 20 GEVWMGYYNGHTKVAIKSLK-QGSMSPEAFLAEANLMKQLQHPRLVRLYA----VVTQEP 74
Query: 554 SISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNN 612
IY+I EY N +L F+ P G KLT + I A I +G+ F+ +
Sbjct: 75 ----IYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIE---RKNYIHRD 127
Query: 613 LKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSS-PAKKTSVLARTEQ--DDKSDVY 669
L+ ++L+ E KI + L L E + E + P K T+ A KSDV+
Sbjct: 128 LRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 187
Query: 670 DIGIILIEIIV-GR-PITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRM 727
GI+L EI+ GR P ++++L + D + +
Sbjct: 188 SFGILLTEIVTYGRIPYPGMTNPEVIQNL---------------ERGYRMPRPDNCPEEL 232
Query: 728 MELCLRCLSNEPKDRPSVE 746
EL C +P++RP+ E
Sbjct: 233 YELMRLCWKEKPEERPTFE 251
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 57.7 bits (139), Expect = 4e-09
Identities = 63/267 (23%), Positives = 114/267 (42%), Gaps = 49/267 (18%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553
G+++ G T VA+++LK SP + +++ KLRH LV ++P
Sbjct: 20 GEVWMGTWNGNTKVAVKTLK-PGTMSPESFLEEAQIMKKLRHDKLVQLYA----VVSEEP 74
Query: 554 SISIIYLIFEYAPNETLRSFIS-GPGYKLTWVQ------RIAAAIAIVKGVQFLHTGIVP 606
IY++ EY +L F+ G G L ++AA +A ++ + ++H
Sbjct: 75 ----IYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIH----- 125
Query: 607 GVFSNNLKITDVLLDENFHVKINSYNLPLLAE-----ARGKGSAEVSSPAKKTSVLARTE 661
+L+ ++L+ + KI + L L E AR + A + ++ R
Sbjct: 126 ----RDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 181
Query: 662 QDDKSDVYDIGIILIEIIV-GR-PITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNEC 719
KSDV+ GI+L E++ GR P N +++L+ V+ C
Sbjct: 182 I--KSDVWSFGILLTELVTKGRVPYPGMNN----REVLEQ-----------VERGYRMPC 224
Query: 720 SDESLKRMMELCLRCLSNEPKDRPSVE 746
+ + EL L+C +P++RP+ E
Sbjct: 225 PQDCPISLHELMLQCWKKDPEERPTFE 251
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 57.1 bits (138), Expect = 8e-09
Identities = 62/254 (24%), Positives = 109/254 (42%), Gaps = 26/254 (10%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553
G++++G + VAI+ LK + ++ + +LRH +L+S C S+ +P
Sbjct: 20 GEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVC---SVGEP 76
Query: 554 SISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNN 612
+Y+I E +L +F+ P G L I A + +G+ +L +
Sbjct: 77 ----VYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEE---QNSIHRD 129
Query: 613 LKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQ--DDKSDVYD 670
L ++L+ E+ K+ + L L + S++ P K T+ A + KSDV+
Sbjct: 130 LAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWS 189
Query: 671 IGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMEL 730
GI+L E+ + + + Q+ G PA +C E K M+E
Sbjct: 190 FGILLYEMFTYGQVPYPGMNNH-EVYDQITAGYRMPC-----PA---KCPQEIYKIMLE- 239
Query: 731 CLRCLSNEPKDRPS 744
C + EP+DRPS
Sbjct: 240 ---CWAAEPEDRPS 250
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 56.3 bits (136), Expect = 1e-08
Identities = 69/269 (25%), Positives = 112/269 (41%), Gaps = 38/269 (14%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553
G++++G + T VA+++LK P + +++ KLRH L+ C +L++P
Sbjct: 20 GEVWEGLWNNTTPVAVKTLK-PGTMDPKDFLAEAQIMKKLRHPKLIQLYAVC---TLEEP 75
Query: 554 SISIIYLIFEYAPNETLRSFI-SGPGYKLTWVQRIAAAIAIVKGVQFL--HTGIVPGVFS 610
IY++ E +L ++ G G L Q I A + G+ +L I
Sbjct: 76 ----IYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYI-----H 126
Query: 611 NNLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKTSVLARTEQ--DDKSD 667
+L +VL+ EN K+ + L ++ E + P K T+ A KSD
Sbjct: 127 RDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSD 186
Query: 668 VYDIGIILIEIIV-GR-PI-TSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESL 724
V+ GI+L EI+ GR P N VL + VD C
Sbjct: 187 VWSFGILLTEIVTYGRMPYPGMTNAEVLQQ----------------VDQGYRMPCPPGCP 230
Query: 725 KRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
K + ++ L C +P DRP+ E W L+
Sbjct: 231 KELYDIMLDCWKEDPDDRPTFETLQWKLE 259
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 55.5 bits (134), Expect = 3e-08
Identities = 61/278 (21%), Positives = 108/278 (38%), Gaps = 58/278 (20%)
Query: 496 IYKGKLTDGTLVAIRSLKMSKKSSP---HMYTYHIELISKLRHSNLVSALGHCLDFSLDD 552
IYKG + V IR+ K K + I+ + ++ +N++ G +D D
Sbjct: 36 IYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDL 94
Query: 553 PSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNN 612
P +S+I EY LR + L++ ++ AI KG+ L+ N
Sbjct: 95 PRLSLI---LEYCTRGYLREVLDKE-KDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKN 148
Query: 613 LKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLAR----------TEQ 662
L L+ EN+ +KI + L + S P K + + +E
Sbjct: 149 LTSVSFLVTENYKLKIICHGLEKILS---------SPPFKNVNFMVYFSYKMLNDIFSEY 199
Query: 663 DDKSDVYDIGIILIEIIVGRPITSENVV------VLVKDLLQVNIGTDEAR--KSIVDPA 714
K D+Y +G++L EI G+ I EN+ +++ + + D K IV+
Sbjct: 200 TIKDDIYSLGVVLWEIFTGK-IPFENLTTKEIYDLIINKNNSLKLPLDCPLEIKCIVE-- 256
Query: 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNL 752
C S++ RP++++ L+NL
Sbjct: 257 ------------------ACTSHDSIKRPNIKEILYNL 276
|
Length = 283 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 55.1 bits (133), Expect = 4e-08
Identities = 64/272 (23%), Positives = 116/272 (42%), Gaps = 44/272 (16%)
Query: 492 SHGQIYKG-KLTDGTLVAIRSLKM---SKKSSPHMYTYH--IELISKLRHSNLVSALGHC 545
S G +Y+G L DG A++ + + + + I L+SKL+H N+V LG
Sbjct: 12 SFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTE 71
Query: 546 LDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIV 605
+ +D +Y+ E P +L + G I+ G+++LH
Sbjct: 72 RE---EDN----LYIFLELVPGGSLAKLLKKYG-SFPEPVIRLYTRQILLGLEYLHDR-- 121
Query: 606 PGVFSNNLKITDVLLDENFHVKINSYNLP----LLAEARG-KGSAEVSSPAKKTSVLART 660
++K ++L+D N VK+ + + + A+ KGS +P V+A+
Sbjct: 122 -NTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFKGSPYWMAP----EVIAQQ 176
Query: 661 EQDD-KSDVYDIGIILIEIIVGRPITS--ENVVVLVKDLLQVNIGTDEARKSIVDPAVMN 717
+D++ +G ++E+ G+P S E V + K IG +S P + +
Sbjct: 177 GGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFK------IG-----RSKELPPIPD 225
Query: 718 ECSDESLKRMMELCLRCLSNEPKDRPSVEDTL 749
SDE+ + L+CL +P RP+ + L
Sbjct: 226 HLSDEA----KDFILKCLQRDPSLRPTAAELL 253
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 56.4 bits (136), Expect = 5e-08
Identities = 26/75 (34%), Positives = 44/75 (58%)
Query: 106 STLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTL 165
+ + L L+ ++L + G +P S+ +SLE+L+LS N +GSIP + L +L+ L
Sbjct: 436 NDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRIL 495
Query: 166 ILDDNKFTGAVPSEL 180
L+ N +G VP+ L
Sbjct: 496 NLNGNSLSGRVPAAL 510
|
Length = 623 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 53.0 bits (127), Expect = 2e-07
Identities = 75/278 (26%), Positives = 110/278 (39%), Gaps = 65/278 (23%)
Query: 505 TLVAIRSLKMSKKSSPHM-YTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFE 563
T VA++ LK + SS L+ ++ H +++ G C S D P + LI E
Sbjct: 31 TTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGAC---SQDGP----LLLIVE 83
Query: 564 YAPNETLRSFIS-----GPGY------------------KLTWVQRIAAAIAIVKGVQFL 600
YA +LRSF+ GP Y LT I+ A I +G+Q+L
Sbjct: 84 YAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYL 143
Query: 601 HTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP--LLAE----ARGKGSAEVSSPAKKT 654
+ +L +VL+ E +KI+ + L + E R KG V A ++
Sbjct: 144 AE---MKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIES 200
Query: 655 SVLARTEQDDKSDVYDIGIILIEIIV--GRP---ITSENVVVLVKDLLQVNIGTDEARKS 709
L +SDV+ G++L EI+ G P I E + L+K G R
Sbjct: 201 --LFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLK------TGYRMERP- 251
Query: 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVED 747
CS+E M L L C EP RP+ D
Sbjct: 252 -------ENCSEE----MYNLMLTCWKQEPDKRPTFAD 278
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 5e-07
Identities = 72/309 (23%), Positives = 138/309 (44%), Gaps = 56/309 (18%)
Query: 490 DASHGQIYKG--KLTDGTLVAIRSLKMS-KKSSPHMYTYHIELISKLRHSNLVSALGHCL 546
+ ++ ++KG KLT+ LVA++ +++ ++ +P + L+ L+H+N+V+ H
Sbjct: 16 EGTYATVFKGRSKLTE-NLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTL--H-- 70
Query: 547 DFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVP 606
D D S++ L+FEY ++ L+ ++ G ++ I++G+ + H
Sbjct: 71 DIVHTDKSLT---LVFEYL-DKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHR---R 123
Query: 607 GVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTS----------- 655
V +LK ++L++E +K+ + L AR K S P K S
Sbjct: 124 KVLHRDLKPQNLLINERGELKLADFGL-----ARAK-----SVPTKTYSNEVVTLWYRPP 173
Query: 656 --VLARTEQDDKSDVYDIGIILIEIIVGRPI----TSENVVVLVKDLLQV-------NIG 702
+L +E + D++ +G I E+ GRP+ T E+ + L+ LL I
Sbjct: 174 DVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGIS 233
Query: 703 TDEARKSIVDPAVMNECSDESLKRM----MELCLRCLSNEPKDRPSVEDTLWNLQF---A 755
+++ K+ P + R+ +EL + L E K R S E+ + + F
Sbjct: 234 SNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG 293
Query: 756 TQIQGLKEN 764
T+I L E+
Sbjct: 294 TRIHSLPES 302
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 51.7 bits (124), Expect = 5e-07
Identities = 44/168 (26%), Positives = 74/168 (44%), Gaps = 36/168 (21%)
Query: 490 DASHGQIYKGKLT------DGTLVAIRSLKMSKKSSPHM---YTYHIELISKLRHSNLVS 540
+ + G++YKG+LT T VAI++LK + + P + + EL+S L+H N+V
Sbjct: 15 EGAFGKVYKGELTGPNERLSATSVAIKTLK--ENAEPKVQQEFRQEAELMSDLQHPNIVC 72
Query: 541 ALGHCLDFSLDDPSISIIYLIFEYAPNETLRSF------ISGPGYK---------LTWVQ 585
LG C + P+ ++FEY + L F S G + L
Sbjct: 73 LLGVCTK---EQPTC----MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSD 125
Query: 586 RIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633
+ AI I G+++L + +L + L+ E VKI+ + L
Sbjct: 126 FLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEGLTVKISDFGL 170
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 51.0 bits (123), Expect = 7e-07
Identities = 61/263 (23%), Positives = 108/263 (41%), Gaps = 61/263 (23%)
Query: 500 KLTDGTLVAIRSLK----MSKKSSPHMYT-YHIELISKLRHSNLVSALGHCLDFSLDDPS 554
K G L A++ LK + +K H T +I +S++ H +V L ++
Sbjct: 14 KKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNI--LSRINHPFIV-----KLHYAFQTEE 66
Query: 555 ISIIYLIFEYAPNETLRSFISGPGY-KLTWVQRIAAAIAIVKGVQFLHT-GIVPGVFSNN 612
+YL+ EYAP L S +S G + AA I V +++LH+ GI+ +
Sbjct: 67 K--LYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEI--VLALEYLHSLGIIYR----D 118
Query: 613 LKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTS------------VLART 660
LK ++LLD + H+K+ + L + E+SS +T+ VL
Sbjct: 119 LKPENILLDADGHIKLTDFGL----------AKELSSEGSRTNTFCGTPEYLAPEVLLGK 168
Query: 661 EQDDKSDVYDIGIILIEIIVGR-PITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNEC 719
D + +G++L E++ G+ P +E+ + + +L+ DP E
Sbjct: 169 GYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK-------------DPLRFPEF 215
Query: 720 SDESLKRMMELCLRCLSNEPKDR 742
+ +L L +P R
Sbjct: 216 LSPEAR---DLISGLLQKDPTKR 235
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 50.9 bits (122), Expect = 7e-07
Identities = 51/253 (20%), Positives = 106/253 (41%), Gaps = 31/253 (12%)
Query: 503 DGTLVAIRSLKMSKKSSPHMYTY--HIELISKLRHSNLVSALGHCLDFSLDDPSISIIYL 560
D +LV + + +++ S I ++S L+H N+++ H +DD ++ I
Sbjct: 24 DDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNH----FMDDNTLLI--- 76
Query: 561 IFEYAPNETLRSFISGPGYKLTWVQRIAAA-IAIVKGVQFLHTGIVPGVFSNNLKITDVL 619
EYA TL I +L + + IV V ++H G+ ++K ++
Sbjct: 77 EMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIF 133
Query: 620 LDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKTSVLARTEQ-DDKSDVYDIGIILIE 677
L + +K+ + + +L V +P + L + + + KSD++ +G +L E
Sbjct: 134 LTKAGLIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYE 193
Query: 678 II-VGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLS 736
++ + R + N + LV ++Q N + S ++ L L
Sbjct: 194 LLTLKRTFDATNPLNLVVKIVQGNYTPVVSVYS---------------SELISLVHSLLQ 238
Query: 737 NEPKDRPSVEDTL 749
+P+ RP+ ++ L
Sbjct: 239 QDPEKRPTADEVL 251
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Score = 51.0 bits (122), Expect = 1e-06
Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 28/190 (14%)
Query: 504 GTLVAIRSLKMSKKSSP----HMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI-- 557
G VAI+ + M S+P Y ++L+ LRH N++S L D IS
Sbjct: 35 GQNVAIKKI-MKPFSTPVLAKRTYR-ELKLLKHLRHENIIS---------LSDIFISPLE 83
Query: 558 -IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKIT 616
IY + E + R S P K ++Q I++G++++H+ GV +LK +
Sbjct: 84 DIYFVTELLGTDLHRLLTSRPLEK-QFIQYFL--YQILRGLKYVHSA---GVVHRDLKPS 137
Query: 617 DVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQ--DDKSDVYDIGII 674
++L++EN +KI + L + + + G VS+ + + T Q D + D++ G I
Sbjct: 138 NILINENCDLKICDFGLARIQDPQMTGY--VSTRYYRAPEIMLTWQKYDVEVDIWSAGCI 195
Query: 675 LIEIIVGRPI 684
E++ G+P+
Sbjct: 196 FAEMLEGKPL 205
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328 |
| >gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Score = 49.7 bits (118), Expect = 2e-06
Identities = 54/224 (24%), Positives = 101/224 (45%), Gaps = 25/224 (11%)
Query: 475 LKEATDCFDSSSFMCDASHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKL 533
L++ F+ + + ++GQ+YKG+ + G L AI+ + ++ + I ++ K
Sbjct: 1 LRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEI-KQEINMLKKY 59
Query: 534 -RHSNLVSALGHCLDFS---LDDPSISIIYLIFEYAPNETLRSFIS---GPGYKLTWVQR 586
H N+ + G + + +DD ++L+ E+ ++ I G K W+
Sbjct: 60 SHHRNIATYYGAFIKKNPPGMDDQ----LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY 115
Query: 587 IAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL-LAEARGKGSA 645
I I ++G+ LH V ++K +VLL EN VK+ + + L G+ +
Sbjct: 116 ICREI--LRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNT 170
Query: 646 EVSSPA-KKTSVLARTEQDD-----KSDVYDIGIILIEIIVGRP 683
+ +P V+A E D KSD++ +GI IE+ G P
Sbjct: 171 FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAP 214
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 50.1 bits (118), Expect = 3e-06
Identities = 59/272 (21%), Positives = 101/272 (37%), Gaps = 24/272 (8%)
Query: 492 SHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLD 551
S G++Y + D LVA++ L +S + I L N + DF D
Sbjct: 12 SFGEVYLAR--DRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQD 69
Query: 552 DPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIA--IVKGVQFLHTGIVPGVF 609
+ S+ YL+ EY +L + G K + A I I+ +++LH+ G+
Sbjct: 70 EGSL---YLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GII 123
Query: 610 SNNLKITDVLLDEN-FHVKINSYNLPLLAEARGKGSAEVSSPAKK--TSVLARTEQ---- 662
++K ++LLD + VK+ + L L G S+ + P+ T E
Sbjct: 124 HRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGL 183
Query: 663 -----DDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMN 717
SD++ +GI L E++ G P I +
Sbjct: 184 SLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLA--SPLSP 241
Query: 718 ECSDESLKRMMELCLRCLSNEPKDRPSVEDTL 749
+ K +L + L+ +PK+R S L
Sbjct: 242 SNPELISKAASDLLKKLLAKDPKNRLSSSSDL 273
|
Length = 384 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 49.2 bits (118), Expect = 3e-06
Identities = 58/273 (21%), Positives = 103/273 (37%), Gaps = 39/273 (14%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSL---KMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLD 547
S G + K + +DG ++ + + M++K + ++ +L+H N+V +D
Sbjct: 12 SFGTVRKVRRKSDGKILVWKEIDYGNMTEKEK-QQLVSEVNILRELKHPNIVRYYDRIID 70
Query: 548 FSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFL------H 601
S +Y++ EY L I K + I Q L H
Sbjct: 71 -----RSNQTLYIVMEYCEGGDLAQLIQK-CKKER--KYIEEEFIWRILTQLLLALYECH 122
Query: 602 TGIVPG--VFSNNLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKT-SVL 657
PG V +LK ++ LD N +VK+ + L +L V +P + L
Sbjct: 123 NRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQL 182
Query: 658 ARTEQDDKSDVYDIGIILIEIIVGR-PITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM 716
D+KSD++ +G ++ E+ P T+ N + L + + R S
Sbjct: 183 NHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRRIPYRYS------- 235
Query: 717 NECSDESLKRMMELCLRCLSNEPKDRPSVEDTL 749
L +++ L +P RPS E+ L
Sbjct: 236 -----SELNEVIKSMLNV---DPDKRPSTEELL 260
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 49.5 bits (118), Expect = 3e-06
Identities = 61/265 (23%), Positives = 105/265 (39%), Gaps = 33/265 (12%)
Query: 504 GTLVAIRSLKMSKKSSPHMYTY--HIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLI 561
G +VA+++LK + + + I ++ L H N+V G C + + LI
Sbjct: 33 GEMVAVKTLK-RECGQQNTSGWKKEINILKTLYHENIVKYKGCC-----SEQGGKGLQLI 86
Query: 562 FEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD 621
EY P +LR ++ P +KL Q + A I +G+ +LH+ +L +VLLD
Sbjct: 87 MEYVPLGSLRDYL--PKHKLNLAQLLLFAQQICEGMAYLHS---QHYIHRDLAARNVLLD 141
Query: 622 ENFHVKINSYNLP-------LLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGII 674
+ VKI + L R G + V A L + SDV+ G+
Sbjct: 142 NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA--VECLKENKFSYASDVWSFGVT 199
Query: 675 LIEIIV------GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMM 728
L E++ P E ++ + + V + + + P C E + +M
Sbjct: 200 LYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCP-KNCPQE-VYILM 257
Query: 729 ELCLRCLSNEPKDRPSVEDTLWNLQ 753
+ C E K RP+ + L+
Sbjct: 258 K---NCWETEAKFRPTFRSLIPILK 279
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 3e-06
Identities = 57/262 (21%), Positives = 107/262 (40%), Gaps = 40/262 (15%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMS-KKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD 552
G +YKG L T VA+++ + + + E++ + H N+V +G C+
Sbjct: 9 GDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQ---KQ 65
Query: 553 PSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNN 612
P IY++ E P +L +F+ +LT + + ++ G+++L + +
Sbjct: 66 P----IYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLES---KNCIHRD 118
Query: 613 LKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSS-----PAKKTS--VLARTEQDDK 665
L + L+ EN +KI+ + ++ G VS P K T+ L +
Sbjct: 119 LAARNCLVGENNVLKISDFG---MSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSE 175
Query: 666 SDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM---NECSDE 722
SDV+ GI+L E D + + R+ I M C +E
Sbjct: 176 SDVWSYGILLWETFSL------------GDTPYPGMSNQQTRERIESGYRMPAPQLCPEE 223
Query: 723 SLKRMMELCLRCLSNEPKDRPS 744
+ M++ C + +P++RPS
Sbjct: 224 IYRLMLQ----CWAYDPENRPS 241
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 48.2 bits (115), Expect = 5e-06
Identities = 60/283 (21%), Positives = 106/283 (37%), Gaps = 48/283 (16%)
Query: 482 FDSSSFMCDASHGQIYKGK-LTDGTLVAIRSLKMSKKSSP--HMYTYHIELISKLRHSNL 538
F + S+G +YK K L+D A++ + + S I +++ + H N+
Sbjct: 2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNI 61
Query: 539 VSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQRIAAAI 591
+S LD + + ++ EYAP L IS K W RI I
Sbjct: 62 ISYKEAFLD-------GNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIW--RIF--I 110
Query: 592 AIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGK----GSAEV 647
+++G+Q LH + +LK ++LL N VKI + + + G+
Sbjct: 111 QLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKTQIGTPHY 167
Query: 648 SSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGR-PITSENVVVLVKDLLQVNIGTDEA 706
+P V KSD++ +G +L E+ P + ++ +DL
Sbjct: 168 MAP----EVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSM----QDLRYKVQRGKY- 218
Query: 707 RKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTL 749
P + S + + L +PK RP+ + L
Sbjct: 219 ------PPIPPIYSQD----LQNFIRSMLQVKPKLRPNCDKIL 251
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Score = 48.5 bits (115), Expect = 6e-06
Identities = 54/227 (23%), Positives = 102/227 (44%), Gaps = 25/227 (11%)
Query: 472 LDELKEATDCFDSSSFMCDASHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYHIELI 530
L L++ F+ + + ++GQ+YKG+ + G L AI+ + +++ + I ++
Sbjct: 8 LSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEI-KLEINML 66
Query: 531 SKL-RHSNLVSALGHCLDFS---LDDPSISIIYLIFEYAPNETLRSFIS---GPGYKLTW 583
K H N+ + G + S DD ++L+ E+ ++ + G K W
Sbjct: 67 KKYSHHRNIATYYGAFIKKSPPGHDDQ----LWLVMEFCGAGSVTDLVKNTKGNALKEDW 122
Query: 584 VQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL-LAEARGK 642
+ I I ++G+ LH V ++K +VLL EN VK+ + + L G+
Sbjct: 123 IAYICREI--LRGLAHLH---AHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGR 177
Query: 643 GSAEVSSPA-KKTSVLARTEQDD-----KSDVYDIGIILIEIIVGRP 683
+ + +P V+A E D +SD++ +GI IE+ G P
Sbjct: 178 RNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAP 224
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 48.2 bits (115), Expect = 6e-06
Identities = 50/222 (22%), Positives = 87/222 (39%), Gaps = 60/222 (27%)
Query: 494 GQIYKGKLT------DGTLVAIRSLK-MSKKSSPHMYTYHIELISKLRHSNLVSALGHCL 546
G+++ G+ D LVA+++LK + + + EL++ +H N+V G C
Sbjct: 19 GKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCT 78
Query: 547 DFSLDDPSISIIYLIFEYAP----NETLRS------FISGPGYK--------LTWV-QRI 587
+ DP ++FEY N+ LRS F+ P L + +I
Sbjct: 79 E---GDP----PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQI 131
Query: 588 AAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEA----RGKG 643
A+ + + F+H +L + L+ + VKI + + R G
Sbjct: 132 ASGMVYLASQHFVH---------RDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGG 182
Query: 644 SAEVS----SPAKKTSVLAR---TEQDDKSDVYDIGIILIEI 678
+ P S++ R TE SDV+ G++L EI
Sbjct: 183 HTMLPIRWMPP---ESIMYRKFTTE----SDVWSFGVVLWEI 217
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|238064 cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 1e-05
Identities = 68/264 (25%), Positives = 91/264 (34%), Gaps = 61/264 (23%)
Query: 115 KVLSLVSLGLWGP---------LPGSIAHSSSLEILNLSSNYLSGSIPVQISSL------ 159
K+L L L L G L ++ SL+ L LS N G IP + SL
Sbjct: 21 KLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNET-GRIPRGLQSLLQGLTK 79
Query: 160 -RNLQTLILDDNKFTGAVPSELSLLQ---VLSVLSLKNNSLSG----FLPVSLTGLQ-SL 210
LQ L L DN L L L L L NN L L L L +L
Sbjct: 80 GCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPAL 139
Query: 211 RVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNP 270
+ L N L G L R ++ + L L NN G+
Sbjct: 140 EKLVLGRNRLEGA--SCEALAKAL--------------RANRDLKELNLANN----GIGD 179
Query: 271 D-------ELRSYNQLQKLDISLNRF----VGPFIPSLLSLPSITYLDIHGNKLTG---- 315
L++ L+ LD++ N +L SL S+ L++ N LT
Sbjct: 180 AGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAA 239
Query: 316 -LLLQNMSCNPQLAFVDLSSNLLT 338
L +S N L + LS N +T
Sbjct: 240 ALASALLSPNISLLTLSLSCNDIT 263
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). Length = 319 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 1e-05
Identities = 62/270 (22%), Positives = 106/270 (39%), Gaps = 45/270 (16%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553
G + G G VA++ LK ++ + +++ LRH NLV LG L +P
Sbjct: 20 GDVMLGDYR-GQKVAVKCLKDDSTAA-QAFLAEASVMTTLRHPNLVQLLGVVLQ---GNP 74
Query: 554 SISIIYLIFEYAPNETLRSFISGPGYK-LTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNN 612
+Y++ EY +L ++ G +T Q++ A+ + +G+++L +
Sbjct: 75 ----LYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEE---KNFVHRD 127
Query: 613 LKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTS--VLARTEQDDKSDVYD 670
L +VL+ E+ K++ + LA+ +G P K T+ L + KSDV+
Sbjct: 128 LAARNVLVSEDLVAKVSDFG---LAKEASQGQDSGKLPVKWTAPEALREKKFSTKSDVWS 184
Query: 671 IGIILIEII-VGR---PITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM---NECSDES 723
GI+L EI GR P I + + M C E
Sbjct: 185 FGILLWEIYSFGRVPYP----------------RIPLKDVVPHVEKGYRMEAPEGCPPEV 228
Query: 724 LKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
K M + C +P RP+ + L
Sbjct: 229 YKVMKD----CWELDPAKRPTFKQLREQLA 254
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 47.5 bits (113), Expect = 2e-05
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 9/66 (13%)
Query: 88 NNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNY 147
N+I G + +LGS++SL+VL L G +P S+ +SL ILNL+ N
Sbjct: 451 GNSIRGNIP---------PSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNS 501
Query: 148 LSGSIP 153
LSG +P
Sbjct: 502 LSGRVP 507
|
Length = 623 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 2e-05
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 28/201 (13%)
Query: 494 GQIYKG-KLTDGTLVAIRSLKMSKKSSPHMYTY--HIELISKLRHSNLVSALGHCLDFSL 550
G +YKG L G VAI+ + + K + + I+L+ L+H N+V +G
Sbjct: 14 GVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSI----- 68
Query: 551 DDPSISIIYLIFEYAPNETLRSFI--SGP-GYKLTWVQRIAAAIA-IVKGVQFLHTGIVP 606
+ +Y+I EYA N +LR I GP L +A + +++G+ +LH
Sbjct: 69 --ETSDSLYIILEYAENGSLRQIIKKFGPFPESL-----VAVYVYQVLQGLAYLHE---Q 118
Query: 607 GVFSNNLKITDVLLDENFHVKINSYNLPL-LAEARGKGSAEVSSP---AKKTSVLARTEQ 662
GV ++K ++L ++ VK+ + + L + ++ V +P A + V+ +
Sbjct: 119 GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPE--VIEMSGA 176
Query: 663 DDKSDVYDIGIILIEIIVGRP 683
SD++ +G +IE++ G P
Sbjct: 177 STASDIWSLGCTVIELLTGNP 197
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 47.0 bits (111), Expect = 2e-05
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 19/159 (11%)
Query: 593 IVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPA 651
I+KG+ +LH+ ++K +VLL E+ VK+ + + L + + K + V +P
Sbjct: 110 ILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF 166
Query: 652 -KKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSI 710
V+ ++ D K+D++ +GI IE+ G P SE + V L+ N
Sbjct: 167 WMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKN---------- 216
Query: 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTL 749
+P + + LK +E CL+ EP RP+ ++ L
Sbjct: 217 -NPPTLEGNYSKPLKEFVE---ACLNKEPSFRPTAKELL 251
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 47.1 bits (112), Expect = 2e-05
Identities = 58/263 (22%), Positives = 108/263 (41%), Gaps = 39/263 (14%)
Query: 504 GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFE 563
G +VA++ L+ S + IE++ L+H N+V G C +S ++ L+ E
Sbjct: 33 GEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVC--YSAGRRNLR---LVME 87
Query: 564 YAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN 623
Y P +LR ++ +L + + A I KG+++L + +L ++L++
Sbjct: 88 YLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGS---KRYVHRDLATRNILVESE 144
Query: 624 FHVKINSYNL----PLLAE---ARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILI 676
VKI + L P E R G + + A ++ L ++ SDV+ G++L
Sbjct: 145 NRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPES--LTESKFSVASDVWSFGVVLY 202
Query: 677 EIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVD------------PAVMNECSDESL 724
E+ + ++ +G D+ + IV PA C E
Sbjct: 203 ELFTYSDKSCSPPAEFMR-----MMGNDKQGQMIVYHLIELLKNNGRLPAP-PGCPAE-- 254
Query: 725 KRMMELCLRCLSNEPKDRPSVED 747
+ + C +N+P RPS +
Sbjct: 255 --IYAIMKECWNNDPSQRPSFSE 275
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 2e-05
Identities = 61/272 (22%), Positives = 117/272 (43%), Gaps = 52/272 (19%)
Query: 506 LVAIRSLKM-SKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEY 564
LVA++ L+ + K++ + + ++++S+L+ N++ LG C+D +DP + +I EY
Sbjct: 48 LVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCVD---EDP----LCMITEY 100
Query: 565 APNETLRSFIS------------------GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVP 606
N L F+S +++ + A+ I G+++L +
Sbjct: 101 MENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS---L 157
Query: 607 GVFSNNLKITDVLLDENFHVKIN----SYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQ 662
+L + L+ EN +KI S NL R +G A + + +
Sbjct: 158 NFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKF 217
Query: 663 DDKSDVYDIGIILIEIIV---GRP---ITSENVVVLVKDLLQVNIGTDEARKSIVD-PAV 715
SDV+ G+ L EI++ +P +T E V+ + + D+ R+ + P
Sbjct: 218 TTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFR-----DQGRQVYLFRPPP 272
Query: 716 MNECSDESLKRMMELCLRCLSNEPKDRPSVED 747
C + + EL L+C S + ++RPS D
Sbjct: 273 ---CP----QGLYELMLQCWSRDCRERPSFSD 297
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 46.8 bits (112), Expect = 2e-05
Identities = 56/266 (21%), Positives = 112/266 (42%), Gaps = 40/266 (15%)
Query: 494 GQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD 552
G++YK G VAI+ +++ K++ + I ++ +H N+V L
Sbjct: 33 GEVYKATDRATGKEVAIKKMRLRKQNKELIIN-EILIMKDCKHPNIVDYYDSYLV----- 86
Query: 553 PSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIA--IVKGVQFLHTGIVPGVFS 610
++++ EY +L I+ + + A + +++G+++LH+ V
Sbjct: 87 --GDELWVVMEYMDGGSLTDIITQ--NFVRMNEPQIAYVCREVLQGLEYLHSQ---NVIH 139
Query: 611 NNLKITDVLLDENFHVKINSYNL-PLLAEARGKGSAEVSSPA-KKTSVLARTEQDDKSDV 668
++K ++LL ++ VK+ + L + + K ++ V +P V+ R + K D+
Sbjct: 140 RDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDI 199
Query: 669 YDIGIILIEIIVGR-PITSENVVVLVKDLLQVNIGTDEARKSIVD---PAVMN-ECSDES 723
+ +GI+ IE+ G P E + A I P + N E
Sbjct: 200 WSLGIMCIEMAEGEPPYLREPPL--------------RALFLITTKGIPPLKNPEKWSPE 245
Query: 724 LKRMMELCLRCLSNEPKDRPSVEDTL 749
K + +CL +P+ RPS E+ L
Sbjct: 246 FKDFLN---KCLVKDPEKRPSAEELL 268
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|238064 cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Score = 46.2 bits (110), Expect = 3e-05
Identities = 40/177 (22%), Positives = 72/177 (40%), Gaps = 37/177 (20%)
Query: 88 NNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGP----LPGSIAHSSSLEILNL 143
N + G S + L + LK L+L + G+ L + + +LE+L+L
Sbjct: 146 RNRLEGA-----SCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDL 200
Query: 144 SSNYL----SGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGF 199
++N L + ++ ++SL++L+ L L DN T A + L
Sbjct: 201 NNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAAL------------------- 241
Query: 200 LPVSLTGLQSLRVVSLSANHLSGE-----IPDLRNLKNLRVFDVQDNYFGPRFPRLH 251
L+ SL +SLS N ++ + L ++L D++ N FG +L
Sbjct: 242 ASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLL 298
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). Length = 319 |
| >gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 4e-05
Identities = 60/269 (22%), Positives = 116/269 (43%), Gaps = 39/269 (14%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYH-IELISKLRHS---NLVSALGHCL 546
++G +Y+GK + G +VA++ + + + L+S+LR S N+ G
Sbjct: 13 AYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYG-SY 71
Query: 547 DFSLDDPSISIIYLIFEYAPNETLRSFI-SGPGYKLTWVQRIAAAIA--IVKGVQFLHTG 603
L P + II EYA ++R+ + +GP ++ + I ++ ++++H
Sbjct: 72 ---LKGPRLWII---MEYAEGGSVRTLMKAGP-----IAEKYISVIIREVLVALKYIHKV 120
Query: 604 IVPGVFSNNLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSP--AKKTSVLART 660
GV ++K ++L+ +VK+ + + LL + K S V +P +
Sbjct: 121 ---GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGK 177
Query: 661 EQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECS 720
D K+D++ +GI + E+ G P S+ L+ + P + +
Sbjct: 178 YYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKS-----------KPPRLED-- 224
Query: 721 DESLKRMMELCLRCLSNEPKDRPSVEDTL 749
+ K + E CL EPK+R S E+ L
Sbjct: 225 NGYSKLLREFVAACLDEEPKERLSAEELL 253
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 45.6 bits (108), Expect = 5e-05
Identities = 37/163 (22%), Positives = 69/163 (42%), Gaps = 14/163 (8%)
Query: 558 IYLIFEYAPNETLRSFISGPGY-KLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKIT 616
+YL+ EY S I G W ++ A + V GV+ LH G+ ++K
Sbjct: 72 LYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEV--VLGVEDLHQR---GIIHRDIKPE 126
Query: 617 DVLLDENFHVKINSYNLPLLAEARGK--GSAEVSSPAKKTSVLARTEQDDKSDVYDIGII 674
++L+D+ H+K+ + L K G+ + +P + D SD + +G +
Sbjct: 127 NLLIDQTGHLKLTDFGLSRNGLENKKFVGTPDYLAP----ETILGVGDDKMSDWWSLGCV 182
Query: 675 LIEIIVG-RPITSENVVVLVKDLLQVNIG-TDEARKSIVDPAV 715
+ E + G P +E + ++L I +E ++ AV
Sbjct: 183 IFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAV 225
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 9e-05
Identities = 70/298 (23%), Positives = 116/298 (38%), Gaps = 56/298 (18%)
Query: 490 DASHGQIYKGKLT-DGTLV--AIRSLKMSKKSSPHM-YTYHIELISKL-RHSNLVSALGH 544
+ + GQ+ + + DG + AI+ LK + H + +E++ KL H N+++ LG
Sbjct: 12 EGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGA 71
Query: 545 CLDFSLDDPSISIIYLIFEYAPNETLRSFIS---------------GPGYKLTWVQRIAA 589
C + +Y+ EYAP L F+ G LT Q +
Sbjct: 72 C-------ENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQF 124
Query: 590 AIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSS 649
A + G+Q+L +L +VL+ EN KI + L E K +
Sbjct: 125 ASDVATGMQYLSE---KQFIHRDLAARNVLVGENLASKIADFGLSRGEEVYVKKTMG-RL 180
Query: 650 PAKKTSV--LARTEQDDKSDVYDIGIILIEIIV--GRPITSENVVVLVKDLLQVNIGTDE 705
P + ++ L + KSDV+ G++L EI+ G P L + L Q ++
Sbjct: 181 PVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQ-GYRMEK 239
Query: 706 ARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQGLKE 763
R C DE + EL +C + P +RP Q + Q+ + E
Sbjct: 240 PRN----------CDDE----VYELMRQCWRDRPYERPPFA------QISVQLSRMLE 277
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297 |
| >gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 9e-05
Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 35/209 (16%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKM--SKKSSPHMYTYHIELISKLRHSNLVSALGHCLDF 548
++G +Y+ + T G +VA++ ++M + P I L+ LRH N+V +
Sbjct: 19 TYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGK 78
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
LD I+L+ EY + L S + + Q + +++G+Q+LH +
Sbjct: 79 HLDS-----IFLVMEYCEQD-LASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFI--- 129
Query: 609 FSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTS------------- 655
+LK++++LL + +KI + L AR PAK +
Sbjct: 130 IHRDLKVSNLLLTDKGCLKIADFGL-----AR-----TYGLPAKPMTPKVVTLWYRAPEL 179
Query: 656 VLARTEQDDKSDVYDIGIILIEIIVGRPI 684
+L T D++ +G IL E++ +P+
Sbjct: 180 LLGCTTYTTAIDMWAVGCILAELLAHKPL 208
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 44.7 bits (105), Expect = 9e-05
Identities = 46/199 (23%), Positives = 86/199 (43%), Gaps = 40/199 (20%)
Query: 503 DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIF 562
D LVA+++LK + ++ + EL++ L+H ++V G C++ DP I ++F
Sbjct: 34 DKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVE---GDPLI----MVF 86
Query: 563 EYAPNETLRSFISG------------PGYKLTW------VQRIAAAIAIVKGVQFLHTGI 604
EY + L F+ +LT Q+IAA + + F+H
Sbjct: 87 EYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVH--- 143
Query: 605 VPGVFSNNLKITDVLLDENFHVKINSYNLP--LLAEARGKGSAEVSSPAK---KTSVLAR 659
+L + L+ EN VKI + + + + + P + S++ R
Sbjct: 144 ------RDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYR 197
Query: 660 TEQDDKSDVYDIGIILIEI 678
+ +SDV+ +G++L EI
Sbjct: 198 -KFTTESDVWSLGVVLWEI 215
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 1e-04
Identities = 60/262 (22%), Positives = 110/262 (41%), Gaps = 38/262 (14%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553
G+++ G + T VA+++LK S + L+ L+H LV + ++P
Sbjct: 20 GEVWMGYYNNSTKVAVKTLKPGTMSV-QAFLEEANLMKTLQHDKLVRLYAVV---TKEEP 75
Query: 554 SISIIYLIFEYAPNETLRSFI-SGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNN 612
IY+I EY +L F+ S G K+ + I + I +G+ ++ +
Sbjct: 76 ----IYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRD 128
Query: 613 LKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSS-PAKKTSVLART--EQDDKSDVY 669
L+ +VL+ E+ KI + L + E + E + P K T+ A KSDV+
Sbjct: 129 LRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVW 188
Query: 670 DIGIILIEIIVGRPI-----TSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESL 724
GI+L EI+ I ++ +V+ ++ G R M C DE
Sbjct: 189 SFGILLYEIVTYGKIPYPGMSNSDVMSALQR------GYRMPR--------MENCPDE-- 232
Query: 725 KRMMELCLRCLSNEPKDRPSVE 746
+ ++ C + ++RP+ +
Sbjct: 233 --LYDIMKTCWKEKAEERPTFD 252
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 44.1 bits (104), Expect = 1e-04
Identities = 30/128 (23%), Positives = 54/128 (42%), Gaps = 21/128 (16%)
Query: 487 FMCDASHGQIYKGKLTD----GT---LVAIRSLKM-SKKSSPHMYTYHIELISKLRHSNL 538
F+ + G++Y+G TD G+ VA+++L+ + + L+S H N+
Sbjct: 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNI 61
Query: 539 VSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISG------PGYKLTWVQRIAAAIA 592
V LG CL ++P Y+I E L S++ LT + + +
Sbjct: 62 VKLLGVCLL---NEP----QYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLD 114
Query: 593 IVKGVQFL 600
+ KG +L
Sbjct: 115 VAKGCVYL 122
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 1e-04
Identities = 57/281 (20%), Positives = 107/281 (38%), Gaps = 60/281 (21%)
Query: 492 SHGQIYKG-KLTDGTLVAIRSLKMSKKSSPHMYTYHIE--LISKLRHSNLVSALGHCLDF 548
S G ++K + D + A++ + +SK + E +++KL S ++ LD
Sbjct: 12 SFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDK 71
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFI-SGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPG 607
+ ++ EYA N L + G L Q I I+ G+ LH+
Sbjct: 72 GK-------LNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK---K 121
Query: 608 VFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLART------- 660
+ ++K ++ LD +VKI G A++ S + A T
Sbjct: 122 ILHRDIKSLNLFLDAYDNVKIGDL-----------GVAKLLSD---NTNFANTIVGTPYY 167
Query: 661 ---------EQDDKSDVYDIGIILIEIIVGR-PITSENVVVLVKDLLQVNIGTDEARKSI 710
++KSDV+ +G++L E G+ P + N L+ +++
Sbjct: 168 LSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIR------------ 215
Query: 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWN 751
V S +++ +L +CL+ + + RP L N
Sbjct: 216 ---GVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 2e-04
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 185 VLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIP-DLRNLKNLRVFDVQDNYF 243
+ L L N L GF+P ++ L+ L+ ++LS N + G IP L ++ +L V D+ N F
Sbjct: 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSF 478
Query: 244 GPRFP 248
P
Sbjct: 479 NGSIP 483
|
Length = 623 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 43.8 bits (103), Expect = 2e-04
Identities = 59/270 (21%), Positives = 107/270 (39%), Gaps = 51/270 (18%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMSKKSSPHM-YTYHIELISKLRHSNLVSALGHCLDFSLDD 552
G+++KG L D T VA+++ K + + ++ + H N+V +G C +
Sbjct: 9 GEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVC---TQRQ 65
Query: 553 PSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNN 612
P IY++ E P SF+ +L Q + A+ G+ +L + +
Sbjct: 66 P----IYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLES---KNCIHRD 118
Query: 613 LKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSS------PAKKTS--VLARTEQDD 664
L + L+ EN +KI+ + + +R + SS P K T+ L
Sbjct: 119 LAARNCLVGENNVLKISDFGM-----SRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSS 173
Query: 665 KSDVYDIGIILIEI----IVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMN--- 717
+SDV+ GI+L E + P + +AR+ + M+
Sbjct: 174 ESDVWSYGILLWETFSLGVCPYP----------------GMTNQQAREQVEKGYRMSCPQ 217
Query: 718 ECSDESLKRMMELCLRCLSNEPKDRPSVED 747
+C D+ K M RC +P++RP +
Sbjct: 218 KCPDDVYKVMQ----RCWDYKPENRPKFSE 243
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 2e-04
Identities = 44/196 (22%), Positives = 82/196 (41%), Gaps = 30/196 (15%)
Query: 494 GQIYKGKLTDGTLVAIRSLK---MSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550
G ++ GK VAI+ ++ MS+ + +++ KL H NLV G C
Sbjct: 18 GVVHLGKWRGKIDVAIKMIREGAMSEDD----FIEEAKVMMKLSHPNLVQLYGVCTKQR- 72
Query: 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFS 610
P I+++ EY N L +++ KL + + + +++L + G
Sbjct: 73 --P----IFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESN---GFIH 123
Query: 611 NNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSS------PAKKTS--VLARTEQ 662
+L + L+ E+ VK++ + L AR + +S P K V +
Sbjct: 124 RDLAARNCLVGEDNVVKVSDFGL-----ARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRF 178
Query: 663 DDKSDVYDIGIILIEI 678
KSDV+ G+++ E+
Sbjct: 179 SSKSDVWSFGVLMWEV 194
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 2e-04
Identities = 60/278 (21%), Positives = 106/278 (38%), Gaps = 50/278 (17%)
Query: 490 DASHGQIYKGKLTDGTL---VAIRSLKMSKKSSPHM-YTYHIELISKL-RHSNLVSALGH 544
+ + GQ+ K ++ L AI+ +K H + +E++ KL H N+++ LG
Sbjct: 5 EGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGA 64
Query: 545 CLDFSLDDPSISIIYLIFEYAPNETLRSFIS---------------GPGYKLTWVQRIAA 589
C +YL EYAP+ L F+ L+ Q +
Sbjct: 65 C-------EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 117
Query: 590 AIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSS 649
A + +G+ +L +L ++L+ EN+ KI + L E K +
Sbjct: 118 AADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG-RL 173
Query: 650 PAKKTSV--LARTEQDDKSDVYDIGIILIEIIV--GRPITSENVVVLVKDLLQVNIGTDE 705
P + ++ L + SDV+ G++L EI+ G P L + L Q ++
Sbjct: 174 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ-GYRLEK 232
Query: 706 ARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRP 743
C DE + +L +C +P +RP
Sbjct: 233 PLN----------CDDE----VYDLMRQCWREKPYERP 256
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270 |
| >gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 2e-04
Identities = 43/201 (21%), Positives = 91/201 (45%), Gaps = 21/201 (10%)
Query: 491 ASHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFS 549
++G +YK + + G L AI+ +K+ + I ++ +HSN+V+ G L
Sbjct: 20 GTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYL--- 76
Query: 550 LDDPSISIIYLIFEYAPNETLRSF--ISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPG 607
+++ E+ +L+ ++GP L+ Q + ++G+ +LH+ G
Sbjct: 77 ----RRDKLWICMEFCGGGSLQDIYHVTGP---LSESQIAYVSRETLQGLYYLHS---KG 126
Query: 608 VFSNNLKITDVLLDENFHVKINSYNLPLLAEAR-GKGSAEVSSPAKKTSVLARTEQ---- 662
++K ++LL +N HVK+ + + A K + + +P +A E+
Sbjct: 127 KMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGY 186
Query: 663 DDKSDVYDIGIILIEIIVGRP 683
+ D++ +GI IE+ +P
Sbjct: 187 NQLCDIWAVGITAIELAELQP 207
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267 |
| >gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 2e-04
Identities = 48/211 (22%), Positives = 98/211 (46%), Gaps = 38/211 (18%)
Query: 490 DASHGQIYKG--KLTDGTLVAIRSLKMS-KKSSPHMYTYHIELISKLRHSNLVSALGHCL 546
+ ++ ++KG KLT LVA++ +++ ++ +P + L+ L+H+N+V+ H
Sbjct: 15 EGTYATVFKGRSKLT-ENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTL--H-- 69
Query: 547 DFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVP 606
D + ++ L+FEY ++ L+ ++ G ++ +++G+ + H
Sbjct: 70 DIIHTERCLT---LVFEYLDSD-LKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHK---R 122
Query: 607 GVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTS----------- 655
+ +LK ++L++E +K+ + L AR K S P K S
Sbjct: 123 KILHRDLKPQNLLINEKGELKLADFGL-----ARAK-----SVPTKTYSNEVVTLWYRPP 172
Query: 656 --VLARTEQDDKSDVYDIGIILIEIIVGRPI 684
+L TE D++ +G IL E+ GRP+
Sbjct: 173 DVLLGSTEYSTPIDMWGVGCILYEMATGRPM 203
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 2e-04
Identities = 47/213 (22%), Positives = 89/213 (41%), Gaps = 41/213 (19%)
Query: 490 DASHGQIYKGK-LTDGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSAL---G 543
+ ++G +YK + G +VAI+ +K+ +S P I+L+ +L H N++ L
Sbjct: 9 EGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFR 68
Query: 544 HCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTG 603
H D YL+FE+ + L I L + +++G+ F H+
Sbjct: 69 HKGDL----------YLVFEFM-DTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSH 117
Query: 604 IVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSA------EVS-----SPAK 652
G+ +LK ++L++ +K+ + L AR GS V +P
Sbjct: 118 ---GILHRDLKPENLLINTEGVLKLADFGL-----ARSFGSPVRPYTHYVVTRWYRAP-- 167
Query: 653 KTSVLARTEQDDKS-DVYDIGIILIEIIVGRPI 684
+L + D++ +G I E++ RP+
Sbjct: 168 --ELLLGDKGYSTPVDIWSVGCIFAELLSRRPL 198
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 3e-04
Identities = 53/261 (20%), Positives = 103/261 (39%), Gaps = 37/261 (14%)
Query: 494 GQIYKGKL-TDGTLVAIRSLKMSKKSSPHM---YTYHIELISKLRHSNLVSALGHCLDFS 549
G+++ G+L D T VA++S + + P + + ++ + H N+V +G C +
Sbjct: 9 GEVFSGRLRADNTPVAVKSCR--ETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC---T 63
Query: 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVF 609
P IY++ E +F+ G +L + I G+++L +
Sbjct: 64 QKQP----IYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLES---KHCI 116
Query: 610 SNNLKITDVLLDENFHVKINSYNLPLLAE----ARGKGSAEVSSPAKKTS--VLARTEQD 663
+L + L+ E +KI+ + + E A G ++ P K T+ L
Sbjct: 117 HRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQI--PVKWTAPEALNYGRYS 174
Query: 664 DKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDES 723
+SDV+ GI+L E + N+ +++ + ++ V C +
Sbjct: 175 SESDVWSFGILLWEAFSLGAVPYANL-------------SNQQTREAIEQGVRLPCPELC 221
Query: 724 LKRMMELCLRCLSNEPKDRPS 744
+ L RC +P RPS
Sbjct: 222 PDAVYRLMERCWEYDPGQRPS 242
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Score = 43.4 bits (102), Expect = 3e-04
Identities = 50/208 (24%), Positives = 95/208 (45%), Gaps = 29/208 (13%)
Query: 492 SHGQIYKGKLTDGTLVAIRSLKM---SKKSSPHMYTY---HIELISKLRHSNLVSALGHC 545
++G +Y G G L+A++ +++ + ++ Y ++L+ L+H N+V LG C
Sbjct: 12 AYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTC 71
Query: 546 LDFSLDDPSISIIYLIFEYAPNETLRSFIS--GPGYKLTWVQRIAAAIAIVKGVQFLHTG 603
LDD +ISI E+ P ++ S ++ GP + + + I+ GV +LH
Sbjct: 72 ----LDDNTISI---FMEFVPGGSISSILNRFGPLPEPVFCKYTK---QILDGVAYLHNN 121
Query: 604 IVPGVFSNNLKITDVLLDENFHVKINSYNLP-LLAEARGKGS-AEVSSPAKKT------S 655
V ++K +V+L N +K+ + LA G+ + + T
Sbjct: 122 ---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPE 178
Query: 656 VLARTEQDDKSDVYDIGIILIEIIVGRP 683
V+ + KSD++ IG + E+ G+P
Sbjct: 179 VINESGYGRKSDIWSIGCTVFEMATGKP 206
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265 |
| >gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Score = 43.4 bits (102), Expect = 3e-04
Identities = 65/287 (22%), Positives = 113/287 (39%), Gaps = 50/287 (17%)
Query: 490 DASHGQIYKGKLTDGTL---VAIRSLKMSKKSSPHM-YTYHIELISKL-RHSNLVSALGH 544
+ + GQ+ K ++ L AI+ +K H + +E++ KL H N+++ LG
Sbjct: 17 EGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGA 76
Query: 545 CLDFSLDDPSISIIYLIFEYAPNETLRSFI-------SGPGY--------KLTWVQRIAA 589
C +YL EYAP+ L F+ + P + L+ Q +
Sbjct: 77 C-------EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 129
Query: 590 AIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSS 649
A + +G+ +L +L ++L+ EN+ KI + L E K +
Sbjct: 130 AADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG-RL 185
Query: 650 PAKKTSV--LARTEQDDKSDVYDIGIILIEIIV--GRPITSENVVVLVKDLLQVNIGTDE 705
P + ++ L + SDV+ G++L EI+ G P L + L Q
Sbjct: 186 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ----GYR 241
Query: 706 ARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNL 752
K + C DE + +L +C +P +RPS L +L
Sbjct: 242 LEKPL-------NCDDE----VYDLMRQCWREKPYERPSFAQILVSL 277
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 38.7 bits (91), Expect = 4e-04
Identities = 21/60 (35%), Positives = 28/60 (46%)
Query: 137 SLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSL 196
+L+ L+LS+N L+ L NL+ L L N T P S L L L L N+L
Sbjct: 1 NLKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 4e-04
Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 30/198 (15%)
Query: 493 HGQIYKG--KLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550
+G++Y+G K T VA+++LK + ++ +++H NLV LG C +
Sbjct: 19 YGEVYEGVWKKYSLT-VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC---TR 73
Query: 551 DDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQRIAAAIAIVKGVQFLHTG 603
+ P Y+I E+ L ++ + L +I++A+ ++ F+H
Sbjct: 74 EPP----FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH-- 127
Query: 604 IVPGVFSNNLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKTS--VLART 660
+L + L+ EN VK+ + L L+ A P K T+ LA
Sbjct: 128 -------RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN 180
Query: 661 EQDDKSDVYDIGIILIEI 678
+ KSDV+ G++L EI
Sbjct: 181 KFSIKSDVWAFGVLLWEI 198
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 42.7 bits (100), Expect = 4e-04
Identities = 45/206 (21%), Positives = 85/206 (41%), Gaps = 52/206 (25%)
Query: 503 DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIF 562
D LVA+++LK + +S+ + EL++ L+H ++V G C + P + ++F
Sbjct: 34 DKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTE---GRPLL----MVF 86
Query: 563 EYAPNETLRSFIS--GP------------------GYKLTWVQRIAAAIAIVKGVQFLHT 602
EY + L F+ GP G L +IA+ + + + F+H
Sbjct: 87 EYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVH- 145
Query: 603 GIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKT-------- 654
+L + L+ + VKI + + +R S + +T
Sbjct: 146 --------RDLATRNCLVGQGLVVKIGDFGM-----SRDIYSTDYYRVGGRTMLPIRWMP 192
Query: 655 --SVLARTEQDDKSDVYDIGIILIEI 678
S+L R + +SD++ G++L EI
Sbjct: 193 PESILYR-KFTTESDIWSFGVVLWEI 217
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 42.3 bits (99), Expect = 4e-04
Identities = 61/258 (23%), Positives = 104/258 (40%), Gaps = 41/258 (15%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553
G + +G+ T G VA++++K + + +++KL H NLV LG L L
Sbjct: 20 GAVLQGEYT-GQKVAVKNIKCD--VTAQAFLEETAVMTKLHHKNLVRLLGVILHNGL--- 73
Query: 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWV-QRIAAAIAIVKGVQFLHTGIVPGVFSNN 612
Y++ E L +F+ G L V Q + ++ + +G+++L + + +
Sbjct: 74 -----YIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLES---KKLVHRD 125
Query: 613 LKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTS--VLARTEQDDKSDVYD 670
L ++L+ E+ K++ + LA G P K T+ L + KSDV+
Sbjct: 126 LAARNILVSEDGVAKVSDFG---LARVGSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWS 182
Query: 671 IGIILIEII-VGR---PITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKR 726
G++L E+ GR P S V K V+ E +
Sbjct: 183 YGVLLWEVFSYGRAPYPKMSLKEV-----------------KECVEKGYRMEPPEGCPAD 225
Query: 727 MMELCLRCLSNEPKDRPS 744
+ L C EPK RPS
Sbjct: 226 VYVLMTSCWETEPKKRPS 243
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 5e-04
Identities = 57/263 (21%), Positives = 107/263 (40%), Gaps = 27/263 (10%)
Query: 504 GTLVAIRSLK-MSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIF 562
G VA++SLK S + IE++ L H N+V G C + + I LI
Sbjct: 33 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGIC-----TEDGGNGIKLIM 87
Query: 563 EYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE 622
E+ P+ +L+ ++ K+ Q++ A+ I KG+ +L + +L +VL++
Sbjct: 88 EFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVES 144
Query: 623 NFHVKINSYNLPLLAEARGKGSAEVS----SPA--KKTSVLARTEQDDKSDVYDIGIILI 676
VKI + L E K V SP L +++ SDV+ G+ L
Sbjct: 145 EHQVKIGDFGLTKAIET-DKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLY 203
Query: 677 EIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPA-VMNE-----CSDESLKRMMEL 730
E++ S + + +K IG + ++ V+ E + + +L
Sbjct: 204 ELLTYCDSESSPMTLFLK-----MIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQL 258
Query: 731 CLRCLSNEPKDRPSVEDTLWNLQ 753
+C +P R + ++ + +
Sbjct: 259 MRKCWEFQPSKRTTFQNLIEGFE 281
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 42.1 bits (100), Expect = 5e-04
Identities = 60/293 (20%), Positives = 109/293 (37%), Gaps = 86/293 (29%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYH--IELISKLRHSNLVSALGHCLDF 548
S G++Y + +DG L ++ + +S S ++++ KL H N++ +
Sbjct: 12 SFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNII----KYYES 67
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFI-----SGPGYK----LTW-VQRIAAAIAIVKGVQ 598
+ + I + EYA L I G + L W VQ + ++
Sbjct: 68 FEEKGKLCI---VMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQ-------LCLALK 117
Query: 599 FLHTGIVPGVFSNN-----LKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKK 653
+LH S +K ++ L N VK+ + + S +SS
Sbjct: 118 YLH--------SRKILHRDIKPQNIFLTSNGLVKLGDFGI----------SKVLSS---- 155
Query: 654 TSVLART----------EQ------DDKSDVYDIGIILIEIIVG-RPITSENVVVLVKDL 696
T LA+T E + KSD++ +G +L E+ P EN++ L +
Sbjct: 156 TVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKI 215
Query: 697 LQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTL 749
L+ P + ++ S E + L L +P++RPS+ L
Sbjct: 216 LKGQY-----------PPIPSQYSSE----LRNLVSSLLQKDPEERPSIAQIL 253
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Score = 42.3 bits (99), Expect = 6e-04
Identities = 26/99 (26%), Positives = 54/99 (54%), Gaps = 13/99 (13%)
Query: 590 AIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL---PLLAEARGK---G 643
A I+ G+QFLH+ G+ +LK+ ++LLD + H+KI + + +L +A+ G
Sbjct: 102 AAEIICGLQFLHS---KGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCG 158
Query: 644 SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGR 682
+ + +P +L + + D + G++L E+++G+
Sbjct: 159 TPDYIAP----EILLGQKYNTSVDWWSFGVLLYEMLIGQ 193
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 8e-04
Identities = 24/85 (28%), Positives = 45/85 (52%)
Query: 261 NNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQN 320
+N+ G P+++ LQ +++S N G PSL S+ S+ LD+ N G + ++
Sbjct: 426 DNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPES 485
Query: 321 MSCNPQLAFVDLSSNLLTGYLPSCL 345
+ L ++L+ N L+G +P+ L
Sbjct: 486 LGQLTSLRILNLNGNSLSGRVPAAL 510
|
Length = 623 |
| >gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 8e-04
Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 7/98 (7%)
Query: 590 AIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVK-----INSYNLPLLAEARGKGS 644
A++IVK +++LH+ + V ++K ++VL++ N VK I+ Y + +A+ G
Sbjct: 109 AVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAKTIDAGC 166
Query: 645 AEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGR 682
+P + L + D KSDV+ +GI +IE+ GR
Sbjct: 167 KPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGR 204
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 41.6 bits (97), Expect = 0.001
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 19/159 (11%)
Query: 593 IVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPA 651
I+KG+ +LH+ ++K +VLL E VK+ + + L + + K + V +P
Sbjct: 110 ILKGLDYLHS---EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPF 166
Query: 652 -KKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSI 710
V+ ++ D K+D++ +GI IE+ G P S+ + V L+ N
Sbjct: 167 WMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNP-------- 218
Query: 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTL 749
P + E S K E CL+ +P RP+ ++ L
Sbjct: 219 --PTLTGEFS----KPFKEFIDACLNKDPSFRPTAKELL 251
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.001
Identities = 48/202 (23%), Positives = 82/202 (40%), Gaps = 30/202 (14%)
Query: 494 GQIYKGKLTDG----TLVAIRSL-KMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDF 548
G +Y G L D A++SL +++ + ++ H N++S LG CL
Sbjct: 9 GCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICL-- 66
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
PS ++ Y + LR+FI + T I + + KG+++L +
Sbjct: 67 ----PSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLAS---KKF 119
Query: 609 FSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSV-----------L 657
+L + +LDE+F VK+ + L AR E S T L
Sbjct: 120 VHRDLAARNCMLDESFTVKVADFGL-----ARDIYDKEYYSVHNHTGAKLPVKWMALESL 174
Query: 658 ARTEQDDKSDVYDIGIILIEII 679
+ KSDV+ G++L E++
Sbjct: 175 QTQKFTTKSDVWSFGVLLWELM 196
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 41.1 bits (96), Expect = 0.001
Identities = 49/206 (23%), Positives = 86/206 (41%), Gaps = 50/206 (24%)
Query: 496 IYKGKLTD-------GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDF 548
I KG+ D G VA++ +K ++ + ++++LRHSNLV LG ++
Sbjct: 14 IGKGEFGDVMLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVE- 70
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQRIAAAIAIVKGVQFLH 601
+Y++ EY +L ++ G L + + A+ ++ F+H
Sbjct: 71 -----EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVH 125
Query: 602 TGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSS-------PAKKT 654
+L +VL+ E+ K++ + L + E SS P K T
Sbjct: 126 ---------RDLAARNVLVSEDNVAKVSDFGL----------TKEASSTQDTGKLPVKWT 166
Query: 655 SVLARTEQ--DDKSDVYDIGIILIEI 678
+ A E+ KSDV+ GI+L EI
Sbjct: 167 APEALREKKFSTKSDVWSFGILLWEI 192
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 40.8 bits (95), Expect = 0.001
Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 19/159 (11%)
Query: 593 IVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPA 651
I+KG+ +LH+ ++K +VLL E VK+ + + L + + K + V +P
Sbjct: 110 ILKGLDYLHS---ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPF 166
Query: 652 -KKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSI 710
V+ ++ D K+D++ +GI IE+ G P S+ + V L+ N
Sbjct: 167 WMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKN---------- 216
Query: 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTL 749
P + + K +E CL+ +P+ RP+ ++ L
Sbjct: 217 -SPPTLEGQYSKPFKEFVE---ACLNKDPRFRPTAKELL 251
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 37.1 bits (87), Expect = 0.002
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 113 SLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKF 172
+LK L L + L G+ +L++L+LS N L+ P S L +L++L L N
Sbjct: 1 NLKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 40.1 bits (93), Expect = 0.003
Identities = 41/182 (22%), Positives = 82/182 (45%), Gaps = 14/182 (7%)
Query: 504 GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFE 563
G VAI+ + + K+ + I ++ +L++ N+V+ L L + D ++++ E
Sbjct: 44 GQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFL---VGDE----LFVVME 96
Query: 564 YAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN 623
Y +L ++ + Q A ++ ++FLH V ++K +VLL +
Sbjct: 97 YLAGGSLTDVVTETC--MDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMD 151
Query: 624 FHVKINSYNL-PLLAEARGKGSAEVSSPA-KKTSVLARTEQDDKSDVYDIGIILIEIIVG 681
VK+ + + + K S V +P V+ R K D++ +GI+ IE++ G
Sbjct: 152 GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEG 211
Query: 682 RP 683
P
Sbjct: 212 EP 213
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.003
Identities = 48/210 (22%), Positives = 98/210 (46%), Gaps = 31/210 (14%)
Query: 492 SHGQIYKG-KLTDGTLVAIRSLKMS---------KKSSPHMYTYHIELISKLRHSNLVSA 541
S G +Y G + G L+A++ +++ K+S I L+ +L+H N+V
Sbjct: 12 SFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQY 71
Query: 542 LGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPG-YKLTWVQRIAAAIAIVKGVQFL 600
LG SLD ++I EY P ++ + ++ G ++ T V+ I+KG+ +L
Sbjct: 72 LGS----SLDADHLNI---FLEYVPGGSVAALLNNYGAFEETLVRNFVR--QILKGLNYL 122
Query: 601 HTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP------LLAEARGKG--SAEVSSPAK 652
H G+ ++K ++L+D +KI+ + + L+ S + S
Sbjct: 123 HN---RGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWM 179
Query: 653 KTSVLARTEQDDKSDVYDIGIILIEIIVGR 682
V+ +T K+D++ +G +++E++ G+
Sbjct: 180 APEVVKQTSYTRKADIWSLGCLVVEMLTGK 209
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.003
Identities = 56/268 (20%), Positives = 113/268 (42%), Gaps = 30/268 (11%)
Query: 490 DASHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDF 548
D + G++YK + G A + +++ + + I+++S+ +H N+V +
Sbjct: 15 DGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYE---AY 71
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
++ ++++ E+ L S + LT Q +++ + FLH+ V
Sbjct: 72 FYENK----LWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKV--- 124
Query: 609 FSNNLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSP--AKKTSVLARTEQDD- 664
+LK ++LL + VK+ + + K + +P V T +D+
Sbjct: 125 IHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNP 184
Query: 665 ---KSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSD 721
K+D++ +GI LIE+ P E + V LL++ KS +P +++ S
Sbjct: 185 YDYKADIWSLGITLIELAQMEPPHHELNPMRV--LLKI-------LKS--EPPTLDQPSK 233
Query: 722 ESLKRMMELCLRCLSNEPKDRPSVEDTL 749
S + CL +P DRP+ + L
Sbjct: 234 WS-SSFNDFLKSCLVKDPDDRPTAAELL 260
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280 |
| >gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.003
Identities = 49/218 (22%), Positives = 86/218 (39%), Gaps = 44/218 (20%)
Query: 492 SHGQIYKGK-LTDGTLVAIRS--LKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDF 548
++G++YK + G LVA++ L+M ++ P I L+ L S + L ++
Sbjct: 13 TYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRL-LDVEH 71
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFI----SGPGYKL--TWVQRIAAAIAIVKGVQFLHT 602
+ +YL+FEY ++ L+ F+ GPG L ++ ++KGV H
Sbjct: 72 VEEKNGKPSLYLVFEYLDSD-LKKFMDSNGRGPGRPLPAKTIKSFM--YQLLKGVAHCHK 128
Query: 603 -----------GIVPGVFSNNLKITDVLLDENFHVKINSY-----NLPLLAEARGKGSAE 646
++ LKI D+ L F + + SY L A GS
Sbjct: 129 HGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTH 188
Query: 647 VSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPI 684
S+P D++ +G I E+ +P+
Sbjct: 189 YSTPV---------------DIWSVGCIFAEMSRKQPL 211
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295 |
| >gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.004
Identities = 33/132 (25%), Positives = 62/132 (46%), Gaps = 17/132 (12%)
Query: 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHT-GIVPGVFSNNLKIT 616
+Y++ EY P L S++ G A+ IV +++LH+ IV +LK
Sbjct: 76 LYMLMEYVPGGELFSYLRNSGRFSNSTGLFYAS-EIVCALEYLHSKEIV----YRDLKPE 130
Query: 617 DVLLDENFHVKINSYNLPLLAEARGK-----GSAEVSSPAKKTSVLARTEQDDKSDVYDI 671
++LLD+ H+K+ + + R + G+ E +P V+ + D + +
Sbjct: 131 NILLDKEGHIKLTDFGFA--KKLRDRTWTLCGTPEYLAP----EVIQSKGHNKAVDWWAL 184
Query: 672 GIILIEIIVGRP 683
GI++ E++VG P
Sbjct: 185 GILIYEMLVGYP 196
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 0.004
Identities = 43/227 (18%), Positives = 78/227 (34%), Gaps = 54/227 (23%)
Query: 492 SHGQIYKGKL-TDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550
S + K AI+ L K+ + K + V L
Sbjct: 13 SFSTVVLAKEKETNKEYAIKIL--DKR-----------QLIKEKKVKYVKIEKEVLTRLN 59
Query: 551 DDPSI----------SIIYLIFEYAPNETLRSFISGPG-YKLTWVQRIAAAIAIVKGVQF 599
P I +Y + EYAPN L +I G + AA I + +++
Sbjct: 60 GHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEI--LLALEY 117
Query: 600 LHT-GIVPGVFSNNLKITDVLLDENFHVKI---------NSYNLPLLAEARGKGSAEVSS 649
LH+ GI+ +LK ++LLD++ H+KI + + P +
Sbjct: 118 LHSKGII----HRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIE 173
Query: 650 PAKKTS-------------VLARTEQDDKSDVYDIGIILIEIIVGRP 683
++ +L SD++ +G I+ +++ G+P
Sbjct: 174 KNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKP 220
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 39.4 bits (93), Expect = 0.004
Identities = 45/218 (20%), Positives = 88/218 (40%), Gaps = 59/218 (27%)
Query: 494 GQIYKGK-LTDGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSL 550
G +YK + G +VA++ +++ + P I L+ +L+H N+V LD
Sbjct: 13 GVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIV----KLLDVIH 68
Query: 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLT--WVQRIAAAIAIVKGVQFLHT-GIV-- 605
+ + YL+FEY + L+ ++ L+ ++ I +++G+ + H+ I+
Sbjct: 69 TERKL---YLVFEYCDMD-LKKYLDKRPGPLSPNLIKSI--MYQLLRGLAYCHSHRILHR 122
Query: 606 ---PG-VF---SNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEV----------- 647
P + LK+ D L F + + +Y + EV
Sbjct: 123 DLKPQNILINRDGVLKLADFGLARAFGIPLRTY------------THEVVTLWYRAPEIL 170
Query: 648 -SSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPI 684
S T+V D++ +G I E+I G+P+
Sbjct: 171 LGSKHYSTAV----------DIWSVGCIFAEMITGKPL 198
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 39.5 bits (92), Expect = 0.004
Identities = 43/198 (21%), Positives = 85/198 (42%), Gaps = 25/198 (12%)
Query: 494 GQIYKG-KLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD 552
G +Y + G VAI+ + + ++ + I ++ + +H N+V+ L L + D
Sbjct: 33 GTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYL---VGD 89
Query: 553 PSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIV-----KGVQFLHTGIVPG 607
++++ EY +L + T IA V + ++FLH+
Sbjct: 90 E----LWVVMEYLAGGSLTDVV-------TETCMDEGQIAAVCRECLQALEFLHSN---Q 135
Query: 608 VFSNNLKITDVLLDENFHVKINSYNL-PLLAEARGKGSAEVSSPA-KKTSVLARTEQDDK 665
V ++K ++LL + VK+ + + + K S V +P V+ R K
Sbjct: 136 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPK 195
Query: 666 SDVYDIGIILIEIIVGRP 683
D++ +GI+ IE++ G P
Sbjct: 196 VDIWSLGIMAIEMVEGEP 213
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 769 | |||
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 100.0 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 100.0 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 100.0 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 100.0 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 100.0 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 100.0 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 100.0 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 100.0 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 100.0 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 100.0 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 100.0 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 100.0 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 100.0 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 100.0 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 100.0 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 100.0 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 100.0 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 100.0 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 100.0 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 100.0 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 100.0 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 100.0 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 100.0 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 100.0 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 100.0 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 100.0 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 100.0 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 100.0 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 100.0 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.98 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.98 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.98 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.98 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.97 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.97 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.97 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.97 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.97 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.97 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.97 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.97 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.96 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.96 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.96 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.96 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.96 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.95 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.95 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.95 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.95 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.95 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.94 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.94 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.94 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.94 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 99.94 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 99.93 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.93 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.93 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.91 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.9 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.9 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.89 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.88 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 99.87 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.87 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.85 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.85 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 99.84 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.84 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.84 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.84 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.83 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.82 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.81 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.8 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.79 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.79 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.78 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.78 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.78 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.78 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.76 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.75 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 99.75 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.75 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.75 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.75 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.75 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.74 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.73 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.73 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.72 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.71 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.69 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 99.69 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.69 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.69 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.67 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.67 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.66 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.66 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.64 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.63 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.61 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.61 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.58 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.49 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.49 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.46 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.38 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.37 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.37 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.31 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 99.31 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.29 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.28 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 99.26 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.22 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.17 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.12 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 99.1 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 99.07 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 99.02 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.01 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 99.0 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 98.95 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 98.94 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 98.93 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 98.91 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 98.9 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 98.89 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 98.87 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 98.86 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 98.86 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.82 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 98.8 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.8 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 98.79 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 98.71 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 98.69 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 98.66 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 98.53 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 98.41 | |
| KOG2137 | 700 | consensus Protein kinase [Signal transduction mech | 98.41 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.4 | |
| COG4248 | 637 | Uncharacterized protein with protein kinase and he | 98.33 | |
| PRK09902 | 216 | hypothetical protein; Provisional | 98.33 | |
| KOG2982 | 418 | consensus Uncharacterized conserved protein [Funct | 98.31 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.3 | |
| COG0661 | 517 | AarF Predicted unusual protein kinase [General fun | 98.27 | |
| COG1718 | 268 | RIO1 Serine/threonine protein kinase involved in c | 98.26 |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-78 Score=743.86 Aligned_cols=266 Identities=24% Similarity=0.442 Sum_probs=206.4
Q ss_pred cCHHHHHHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeecc
Q 004195 470 FTLDELKEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDF 548 (769)
Q Consensus 470 ~~~~el~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~ 548 (769)
++++++. ..|...+.||+|+||.||+|+.. +|..||||+++.... ....|++++++++|||||+++|+|.+.
T Consensus 683 ~~~~~~~---~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~~~~ 755 (968)
T PLN00113 683 ITINDIL---SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS----IPSSEIADMGKLQHPNIVKLIGLCRSE 755 (968)
T ss_pred hhHHHHH---hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc----ccHHHHHHHhhCCCCCcceEEEEEEcC
Confidence 4555554 35778899999999999999974 799999999874332 223568899999999999999999864
Q ss_pred CCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeee
Q 004195 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKI 628 (769)
Q Consensus 549 ~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl 628 (769)
.. .++||||+++|+|.++++ .++|.++.+|+.|+|+||+|||+.+.++|+||||||+||+++.++.+++
T Consensus 756 ~~-------~~lv~Ey~~~g~L~~~l~----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~ 824 (968)
T PLN00113 756 KG-------AYLIHEYIEGKNLSEVLR----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHL 824 (968)
T ss_pred CC-------CEEEEeCCCCCcHHHHHh----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEE
Confidence 43 799999999999999996 4899999999999999999999877789999999999999999988887
Q ss_pred cCCCCchhhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchh--HHHHhhhhhccccccc
Q 004195 629 NSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVV--VLVKDLLQVNIGTDEA 706 (769)
Q Consensus 629 ~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~--~~~~~~~~~~~~~~~~ 706 (769)
. ||.+...... ....++..|++||......++.|+|||||||++|||+||+.|++.... ....+|.+.... ...
T Consensus 825 ~-~~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~ 900 (968)
T PLN00113 825 R-LSLPGLLCTD--TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYS-DCH 900 (968)
T ss_pred E-eccccccccC--CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcC-ccc
Confidence 5 6654332211 122344678889998888999999999999999999999999864321 112222222111 112
Q ss_pred cccccCccccC--CCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 707 RKSIVDPAVMN--ECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 707 ~~~~~d~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
....+||.+.. ..+.++..++.+++.+||+.||++||||+||++.++.+.+
T Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 901 LDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred hhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence 33445555533 2345667789999999999999999999999999987644
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-54 Score=462.15 Aligned_cols=283 Identities=31% Similarity=0.581 Sum_probs=239.3
Q ss_pred CccccCHHHHHHHhcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeee
Q 004195 466 AYRTFTLDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHC 545 (769)
Q Consensus 466 ~~~~~~~~el~~~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~ 545 (769)
..+.|+++|+.+||++|+..+.||+|+||.||+|.+++|+.||||++........++|.+|++++.+++|||+|+|+|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 35679999999999999999999999999999999999999999988765433156699999999999999999999999
Q ss_pred eccCCCCCCcceEEEEEeccCCCchhhhhcCCCC-CCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc
Q 004195 546 LDFSLDDPSISIIYLIFEYAPNETLRSFISGPGY-KLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF 624 (769)
Q Consensus 546 ~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~-~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~ 624 (769)
.+.+. +.+||||||++|+|.++++.... +++|.+|++||.++|+||+|||+.+.|+||||||||+|||+|+++
T Consensus 141 ~e~~~------~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~ 214 (361)
T KOG1187|consen 141 LEGGE------HRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDF 214 (361)
T ss_pred ecCCc------eEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCC
Confidence 87442 37999999999999999996555 899999999999999999999999999999999999999999999
Q ss_pred eeeecCCCCchhhhc-cCCcce--eecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCch---hHHHHhhhh
Q 004195 625 HVKINSYNLPLLAEA-RGKGSA--EVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENV---VVLVKDLLQ 698 (769)
Q Consensus 625 ~~kl~DFGla~~~~~-~~~~~~--~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~---~~~~~~~~~ 698 (769)
++||+|||+|+.... ...... .++.+|.+||+...+..++|+|||||||+|+|++||+++.+... ......|..
T Consensus 215 ~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~ 294 (361)
T KOG1187|consen 215 NAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAK 294 (361)
T ss_pred CEEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHH
Confidence 999999999976654 222111 45567888999988999999999999999999999998877432 122333332
Q ss_pred hccccccccccccCcccc-CCCCH-HHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 699 VNIGTDEARKSIVDPAVM-NECSD-ESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 699 ~~~~~~~~~~~~~d~~~~-~~~~~-~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
... ......+++||.+. ..++. +++.++..++.+|++.+|++||+|.||++.+...
T Consensus 295 ~~~-~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~ 352 (361)
T KOG1187|consen 295 PLL-EEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGI 352 (361)
T ss_pred HHH-HCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhh
Confidence 222 22368899999987 56664 6888899999999999999999999999988443
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-47 Score=383.93 Aligned_cols=262 Identities=17% Similarity=0.274 Sum_probs=214.7
Q ss_pred ccCHHHHHHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC-CCChhHHHHHHHHHhhccCCceeeEeeeee
Q 004195 469 TFTLDELKEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK-KSSPHMYTYHIELISKLRHSNLVSALGHCL 546 (769)
Q Consensus 469 ~~~~~el~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~ 546 (769)
.++++|++. .+.||+|..|+|||++++ +++.+|+|.+.... ....+++.+|++++++.+||+||++||.|+
T Consensus 75 ~i~~~dle~-------~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~ 147 (364)
T KOG0581|consen 75 GISLSDLER-------LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFY 147 (364)
T ss_pred ccCHHHhhh-------hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEE
Confidence 356777765 488999999999999987 79999999996442 233578999999999999999999999998
Q ss_pred ccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhccccc-CCCCCccccCccccceeeCCCce
Q 004195 547 DFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHT-GIVPGVFSNNLKITDVLLDENFH 625 (769)
Q Consensus 547 ~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlKp~NILld~~~~ 625 (769)
.... .+.++||||++|||++++...+ .+++...-+|+.+|++||.|||+ + +||||||||+|||++..|+
T Consensus 148 ~~~~------~isI~mEYMDgGSLd~~~k~~g-~i~E~~L~~ia~~VL~GL~YLh~~~---~IIHRDIKPsNlLvNskGe 217 (364)
T KOG0581|consen 148 SNGE------EISICMEYMDGGSLDDILKRVG-RIPEPVLGKIARAVLRGLSYLHEER---KIIHRDIKPSNLLVNSKGE 217 (364)
T ss_pred eCCc------eEEeehhhcCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHhhcc---CeeeccCCHHHeeeccCCC
Confidence 7441 3899999999999999998654 68999999999999999999996 5 9999999999999999999
Q ss_pred eeecCCCCchhhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCch--hHHHHhhhhhcccc
Q 004195 626 VKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENV--VVLVKDLLQVNIGT 703 (769)
Q Consensus 626 ~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~--~~~~~~~~~~~~~~ 703 (769)
+||+|||.++........+..++..||+||.+.+..|+.++||||||++++|+++|+.|+.... .....+++......
T Consensus 218 VKicDFGVS~~lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ 297 (364)
T KOG0581|consen 218 VKICDFGVSGILVNSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDE 297 (364)
T ss_pred EEeccccccHHhhhhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcC
Confidence 9999999998776655566677889999999999999999999999999999999999887631 01111111111100
Q ss_pred ccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 704 DEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 704 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
..|.+... .++.++.+++..|+++||.+||+++|+++|+|..+.
T Consensus 298 -------ppP~lP~~---~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~ 341 (364)
T KOG0581|consen 298 -------PPPRLPEG---EFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKF 341 (364)
T ss_pred -------CCCCCCcc---cCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhc
Confidence 11233222 244559999999999999999999999999998754
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-45 Score=390.27 Aligned_cols=251 Identities=25% Similarity=0.418 Sum_probs=204.2
Q ss_pred cCccccCCceeEEEEEeCCCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEEE
Q 004195 485 SSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIF 562 (769)
Q Consensus 485 ~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV~ 562 (769)
.+.||+|+||+||+|.++....||||++....... .++|.+|+.+|.+++|||||+++|+|.+... ..++||
T Consensus 46 ~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~------~~~iVt 119 (362)
T KOG0192|consen 46 EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPG------SLCIVT 119 (362)
T ss_pred hhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC------ceEEEE
Confidence 35599999999999999744449999998654333 3589999999999999999999999986431 379999
Q ss_pred eccCCCchhhhhcC-CCCCCCHHHHHHHHHHHHHHhcccccCCCCC-ccccCccccceeeCCCc-eeeecCCCCchhhhc
Q 004195 563 EYAPNETLRSFISG-PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPG-VFSNNLKITDVLLDENF-HVKINSYNLPLLAEA 639 (769)
Q Consensus 563 Ey~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-ivHrDlKp~NILld~~~-~~kl~DFGla~~~~~ 639 (769)
|||++|+|.+++++ ....+++..++++|.|||+|+.|||++ + ||||||||+|||++.++ ++||+|||+++....
T Consensus 120 Ey~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~ 196 (362)
T KOG0192|consen 120 EYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVI 196 (362)
T ss_pred EeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeecc
Confidence 99999999999987 356899999999999999999999998 6 99999999999999998 999999999976654
Q ss_pred c--CCcceeecCCCcchhhhc--cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccc
Q 004195 640 R--GKGSAEVSSPAKKTSVLA--RTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAV 715 (769)
Q Consensus 640 ~--~~~~~~~~~~~~~pe~~~--~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 715 (769)
. ......++..|++||.+. ...|+.|+|||||||++|||+||+.||.......+...+... ...|.+
T Consensus 197 ~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~---------~~Rp~~ 267 (362)
T KOG0192|consen 197 SKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVG---------GLRPPI 267 (362)
T ss_pred ccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc---------CCCCCC
Confidence 2 233345667889999998 568999999999999999999999999865542222211110 111222
Q ss_pred cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 716 MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 716 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
...++ ..+..++.+||+.||++||++.+++..+.....
T Consensus 268 p~~~~----~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~ 305 (362)
T KOG0192|consen 268 PKECP----PHLSSLMERCWLVDPSRRPSFLEIVSRLESIMS 305 (362)
T ss_pred CccCC----HHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence 22333 448899999999999999999999999986543
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-46 Score=373.39 Aligned_cols=255 Identities=20% Similarity=0.268 Sum_probs=207.3
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC-------hhHHHHHHHHHhhccCCceeeEeeeeeccCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS-------PHMYTYHIELISKLRHSNLVSALGHCLDFSL 550 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~-------~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~ 550 (769)
.+.|...+.+|+|+||.|-+|..+ +|+.||||++++..... .....+|+++|++++|||||++++++...+.
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 345677899999999999999965 79999999998653211 2345799999999999999999999987554
Q ss_pred CCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC---ceee
Q 004195 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN---FHVK 627 (769)
Q Consensus 551 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~---~~~k 627 (769)
.|+||||++||+|.+.+-.++ .+.+...+.++.|++.|+.|||++ ||+||||||+|||+..+ ..+|
T Consensus 251 -------~YmVlE~v~GGeLfd~vv~nk-~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llK 319 (475)
T KOG0615|consen 251 -------SYMVLEYVEGGELFDKVVANK-YLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLK 319 (475)
T ss_pred -------eEEEEEEecCccHHHHHHhcc-ccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEE
Confidence 799999999999999998665 578888899999999999999999 99999999999999655 7899
Q ss_pred ecCCCCchhhhccC-CcceeecCCCcchhhhccCCC---CCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHh-hhhhcc
Q 004195 628 INSYNLPLLAEARG-KGSAEVSSPAKKTSVLARTEQ---DDKSDVYDIGIILIEIIVGRPITSENVVVL-VKD-LLQVNI 701 (769)
Q Consensus 628 l~DFGla~~~~~~~-~~~~~~~~~~~~pe~~~~~~~---~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~-~~~~~~ 701 (769)
|+|||+|+...... ..+.+++..|.+||++....+ ..|+||||+|||||-+++|.+||.+..... ..+ +....+
T Consensus 320 ItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y 399 (475)
T KOG0615|consen 320 ITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRY 399 (475)
T ss_pred ecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcc
Confidence 99999998875333 355678888899999876543 448899999999999999999998754332 222 222222
Q ss_pred ccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 702 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.. .+....+..++.+++|.++|..||++|||++|+++|+|+..
T Consensus 400 ~f------------~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~ 442 (475)
T KOG0615|consen 400 AF------------GPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKD 442 (475)
T ss_pred cc------------cChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhc
Confidence 11 12233455667999999999999999999999999999973
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-45 Score=371.94 Aligned_cols=255 Identities=24% Similarity=0.348 Sum_probs=206.4
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC--CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK--KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
..+|...+.||+|+||+||+|+++ ++..||||.+.+.. ....+....|+.+|+.++|||||++++++++++.
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~----- 83 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDF----- 83 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCe-----
Confidence 356777888999999999999976 68999999998763 2334567899999999999999999999997554
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC------ceeeec
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN------FHVKIN 629 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~------~~~kl~ 629 (769)
+|||||||.||||.+++++.+ .+++...+.++.|+|.||++||++ +||||||||+|||++.. -.+||+
T Consensus 84 --i~lVMEyC~gGDLs~yi~~~~-~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIA 157 (429)
T KOG0595|consen 84 --IYLVMEYCNGGDLSDYIRRRG-RLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIA 157 (429)
T ss_pred --EEEEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEec
Confidence 999999999999999999776 699999999999999999999999 99999999999999764 468999
Q ss_pred CCCCchhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccc
Q 004195 630 SYNLPLLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARK 708 (769)
Q Consensus 630 DFGla~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (769)
|||+|+....... .+.++...||+||++...+|+.|+|+||.|+|+|||++|++||+......+...++..
T Consensus 158 DFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~-------- 229 (429)
T KOG0595|consen 158 DFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKG-------- 229 (429)
T ss_pred ccchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcc--------
Confidence 9999988865543 4456777889999999999999999999999999999999999876554433322211
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
..+.+..+........+++...++.+|.+|.+..+-+.|.....
T Consensus 230 ----~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~ 273 (429)
T KOG0595|consen 230 ----NEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAA 273 (429)
T ss_pred ----ccccCchhhhccCchhhhhhHHHhcCccccCchHHhhhhhhccc
Confidence 11111222222333556777778888888888888777766543
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-45 Score=386.32 Aligned_cols=250 Identities=21% Similarity=0.345 Sum_probs=214.2
Q ss_pred cCCCCcCccccCCceeEEEEEe-CCCcEEEEEEcccc---CCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKL-TDGTLVAIRSLKMS---KKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
..|...++||+|||+.||.++. ..|+.||+|++.+. +....+...+||+|.+.|+|||||+++++|++.+.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~n----- 92 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNN----- 92 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCc-----
Confidence 4688899999999999999997 78999999999864 33445778999999999999999999999998654
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
+|+|.|+|++|+|.+++++. .++++.++..+..||+.||.|||+. +|+|||||..|+++++++++||+|||+|.
T Consensus 93 --VYivLELC~~~sL~el~Krr-k~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt 166 (592)
T KOG0575|consen 93 --VYIVLELCHRGSLMELLKRR-KPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLAT 166 (592)
T ss_pred --eEEEEEecCCccHHHHHHhc-CCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceee
Confidence 99999999999999999844 4899999999999999999999999 99999999999999999999999999997
Q ss_pred hhhc--cCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHH-HhhhhhccccccccccccC
Q 004195 636 LAEA--RGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLV-KDLLQVNIGTDEARKSIVD 712 (769)
Q Consensus 636 ~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~d 712 (769)
..+. ....+.++++-|.+||++.+...+..+||||+|||||-|++|+|||........ ..+....+.
T Consensus 167 ~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~---------- 236 (592)
T KOG0575|consen 167 QLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYS---------- 236 (592)
T ss_pred eecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcc----------
Confidence 6653 334566788889999999999999999999999999999999999987654333 222221111
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 713 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.|...+.++.+||.++|++||.+|||+++|+.|.+|..
T Consensus 237 ------~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~ 274 (592)
T KOG0575|consen 237 ------MPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKS 274 (592)
T ss_pred ------cccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhC
Confidence 12233344889999999999999999999999999943
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-44 Score=375.75 Aligned_cols=246 Identities=25% Similarity=0.390 Sum_probs=204.3
Q ss_pred cCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEEEec
Q 004195 485 SSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEY 564 (769)
Q Consensus 485 ~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV~Ey 564 (769)
.+.||+|-||.||.|+++....||+|.++.. ....++|.+|+++|++++|+|||+++|+|..... ++|||||
T Consensus 211 ~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~p-------iyIVtE~ 282 (468)
T KOG0197|consen 211 IRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEP-------IYIVTEY 282 (468)
T ss_pred HHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCc-------eEEEEEe
Confidence 4789999999999999987779999999865 3456789999999999999999999999986442 8999999
Q ss_pred cCCCchhhhhcC-CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhccCCc
Q 004195 565 APNETLRSFISG-PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKG 643 (769)
Q Consensus 565 ~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~ 643 (769)
|+.|+|.++|+. .+..+...+.+.++.|||+|++||+++ ++|||||.++|||++++..+||+|||+|+...+....
T Consensus 283 m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~ 359 (468)
T KOG0197|consen 283 MPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYT 359 (468)
T ss_pred cccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCCCcee
Confidence 999999999995 566899999999999999999999999 9999999999999999999999999999965443332
Q ss_pred c---eeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCccccCCC
Q 004195 644 S---AEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNEC 719 (769)
Q Consensus 644 ~---~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 719 (769)
. ......|++||.+....++.|||||||||+||||+| |+.|+.......+.+.+...... .+
T Consensus 360 ~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRl--------------p~ 425 (468)
T KOG0197|consen 360 ASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRL--------------PR 425 (468)
T ss_pred ecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcC--------------CC
Confidence 1 122345688999999999999999999999999999 88888776655554444332221 22
Q ss_pred CHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 720 SDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 720 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
|+.++.++.++|..||+.+|++|||++.+...+...
T Consensus 426 P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~ 461 (468)
T KOG0197|consen 426 PEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDF 461 (468)
T ss_pred CCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHh
Confidence 333444489999999999999999999777665543
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-44 Score=345.79 Aligned_cols=265 Identities=19% Similarity=0.288 Sum_probs=204.4
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
+.|+....+|+|+||.|||++.+ +|+.||||++.....+. .+-..||+++|++++|||+|.++.+|....
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkr------- 74 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKR------- 74 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcc-------
Confidence 45778899999999999999977 69999999997654322 356889999999999999999999997643
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
.++||+|||+. ++-+-+.+....++.....+|+.|+++|+.|+|++ ++|||||||+|||+..++.+|++|||+|+.
T Consensus 75 klhLVFE~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~ 150 (396)
T KOG0593|consen 75 KLHLVFEYCDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFART 150 (396)
T ss_pred eeEEEeeecch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHh
Confidence 38999999986 44455554445689999999999999999999999 999999999999999999999999999998
Q ss_pred hhccCCc--ceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccc---------
Q 004195 637 AEARGKG--SAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTD--------- 704 (769)
Q Consensus 637 ~~~~~~~--~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~--------- 704 (769)
....+.. ....+.-|++||.+.+ .+|+..+||||.||++.||+||.+.|.+.........++..++.-
T Consensus 151 L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~ 230 (396)
T KOG0593|consen 151 LSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFS 230 (396)
T ss_pred hcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhc
Confidence 7643322 2223334567887776 789999999999999999999999887765433333333222211
Q ss_pred --ccc-----ccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 705 --EAR-----KSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 705 --~~~-----~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
+.+ .+.-+++....-.+....-+++++..|++.||++|++-+|++.|.+|-
T Consensus 231 ~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd 288 (396)
T KOG0593|consen 231 SNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFD 288 (396)
T ss_pred cCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHH
Confidence 111 111112111112223344688999999999999999999999999983
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-43 Score=362.01 Aligned_cols=268 Identities=24% Similarity=0.397 Sum_probs=209.7
Q ss_pred hcCCCCcCccccCCceeEEEEEe-CCCcEEEEEEccccC--CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKL-TDGTLVAIRSLKMSK--KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.+.|+..+.||+|.||.||||+. .+|+.||+|+++... .....-..|||.||++++|||||+|.+...+.. .
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~-----~ 190 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKL-----S 190 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecC-----C
Confidence 34577778999999999999995 589999999998764 334566789999999999999999999988652 2
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..+|||+|||+. ||..++..++..++..+++.++.|++.||+|+|++ +|+|||||.+|||||.+|.+||+|||+|+
T Consensus 191 ~siYlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr 266 (560)
T KOG0600|consen 191 GSIYLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLAR 266 (560)
T ss_pred ceEEEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEecccccee
Confidence 348999999985 99999998888899999999999999999999999 99999999999999999999999999999
Q ss_pred hhhccC---CcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhc-cccccccc-
Q 004195 636 LAEARG---KGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVN-IGTDEARK- 708 (769)
Q Consensus 636 ~~~~~~---~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~-~~~~~~~~- 708 (769)
++.... .+...++.-|++||.+.+ ..|+.++|+||.||||.||++|+|.+.+.... .+..+.... ...+..|.
T Consensus 267 ~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~ 346 (560)
T KOG0600|consen 267 FYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPV 346 (560)
T ss_pred eccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhcccc
Confidence 775544 233444455567777655 57999999999999999999999999875433 333332221 11222222
Q ss_pred -c-----ccCcccc-----CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 709 -S-----IVDPAVM-----NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 709 -~-----~~d~~~~-----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
+ .+.|... .+.........++|+..+|..||++|.|+.+++++.||.
T Consensus 347 ~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~ 404 (560)
T KOG0600|consen 347 SKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFT 404 (560)
T ss_pred ccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccc
Confidence 1 1111110 000111234578999999999999999999999999994
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-44 Score=341.93 Aligned_cols=252 Identities=18% Similarity=0.284 Sum_probs=200.6
Q ss_pred CCCCcCccccCCceeEEEEE-eCCCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 481 CFDSSSFMCDASHGQIYKGK-LTDGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~-~~~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
+|.+.+.||+|.||+|||+. ..+|..||.|.++-...+ ..++...|+.+|++++|||||+++++-...+ ...
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~-----~ev 94 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIED-----NEV 94 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhcc-----chh
Confidence 46677999999999999998 458999999999854332 2457889999999999999999988433211 223
Q ss_pred EEEEEeccCCCchhhhhc---CCCCCCCHHHHHHHHHHHHHHhcccccCCCCC--ccccCccccceeeCCCceeeecCCC
Q 004195 558 IYLIFEYAPNETLRSFIS---GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPG--VFSNNLKITDVLLDENFHVKINSYN 632 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDlKp~NILld~~~~~kl~DFG 632 (769)
++||||||..|||...++ +..+.+++..+++++.|+++||..+|... |+ |+||||||.||+++.+|.+|++|||
T Consensus 95 lnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~-~r~~VmHRDIKPaNIFl~~~gvvKLGDfG 173 (375)
T KOG0591|consen 95 LNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKI-PRGTVMHRDIKPANIFLTANGVVKLGDFG 173 (375)
T ss_pred hHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccc-cccceeeccCcchheEEcCCCceeeccch
Confidence 799999999999999986 45567999999999999999999999943 35 8999999999999999999999999
Q ss_pred CchhhhccCC--cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhh-hhcccccccccc
Q 004195 633 LPLLAEARGK--GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLL-QVNIGTDEARKS 709 (769)
Q Consensus 633 la~~~~~~~~--~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~-~~~~~~~~~~~~ 709 (769)
++++...... .+..++++|+.||.+....|+.||||||+||++|||..-++||.+.......+.+ +..+
T Consensus 174 L~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~-------- 245 (375)
T KOG0591|consen 174 LGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDY-------- 245 (375)
T ss_pred hHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCC--------
Confidence 9988765432 2334566778899999999999999999999999999999999876433332222 1110
Q ss_pred ccCccccCCCC-HHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 710 IVDPAVMNECS-DESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 710 ~~d~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
| .++ +-.+..+.++|..|+..||+.||+...++....
T Consensus 246 ---~----~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~ 283 (375)
T KOG0591|consen 246 ---P----PLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ 283 (375)
T ss_pred ---C----CCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence 1 122 345566999999999999999998655555443
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-42 Score=359.63 Aligned_cols=253 Identities=20% Similarity=0.310 Sum_probs=211.9
Q ss_pred HHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCC
Q 004195 477 EATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLD 551 (769)
Q Consensus 477 ~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~ 551 (769)
+...+|...+.||.|+|++||+|+.. +++.+|||++.+.. ....+...+|-++|.+| .||.||+|+-.|.|...
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s- 148 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES- 148 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc-
Confidence 34567888999999999999999965 79999999997652 22335677899999999 89999999999887443
Q ss_pred CCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCC
Q 004195 552 DPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSY 631 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DF 631 (769)
+|+|+||+++|+|.++|++.+ .+++...+.+|.+|+.||+|||++ |||||||||+|||+|+||++||+||
T Consensus 149 ------LYFvLe~A~nGdll~~i~K~G-sfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDF 218 (604)
T KOG0592|consen 149 ------LYFVLEYAPNGDLLDLIKKYG-SFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDF 218 (604)
T ss_pred ------eEEEEEecCCCcHHHHHHHhC-cchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeec
Confidence 999999999999999999776 799999999999999999999999 9999999999999999999999999
Q ss_pred CCchhhhccCC---------------cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCch-hHHHHh
Q 004195 632 NLPLLAEARGK---------------GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENV-VVLVKD 695 (769)
Q Consensus 632 Gla~~~~~~~~---------------~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~-~~~~~~ 695 (769)
|.|+.+..... ....+++.|..||.+.....+..+|+|+||||||+|++|+|||.+.. ...+.+
T Consensus 219 GsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqk 298 (604)
T KOG0592|consen 219 GSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQK 298 (604)
T ss_pred cccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHH
Confidence 99987643211 23456677788999999999999999999999999999999997644 444555
Q ss_pred hhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 696 LLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 696 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
++...+. +...++ +.+.+|+.+.+..||.+|+|.++|-+|++|..
T Consensus 299 I~~l~y~------------fp~~fp----~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~ 343 (604)
T KOG0592|consen 299 IQALDYE------------FPEGFP----EDARDLIKKLLVRDPSDRLTSQQIKAHPFFEG 343 (604)
T ss_pred HHHhccc------------CCCCCC----HHHHHHHHHHHccCccccccHHHHhhCccccc
Confidence 4443322 223334 34889999999999999999999999999975
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-42 Score=327.70 Aligned_cols=266 Identities=18% Similarity=0.307 Sum_probs=210.7
Q ss_pred cCCCCcCccccCCceeEEEEEe-CCCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKL-TDGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
+.|...+.+|+|.||.||+|+. ++|+.||||+++.....+ .....|||+.|+.++|+||+.++++|-..+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~------- 74 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKS------- 74 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCC-------
Confidence 3577789999999999999995 479999999998764332 457899999999999999999999997643
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
.+.||+|||+. +|...++.....++-.+++.++.++.+|++|+|++ .|+||||||.|+|++.+|.+||+|||+|+.
T Consensus 75 ~l~lVfEfm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~ 150 (318)
T KOG0659|consen 75 NLSLVFEFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARF 150 (318)
T ss_pred ceEEEEEeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhc
Confidence 38999999985 99999998878899999999999999999999999 999999999999999999999999999988
Q ss_pred hhccCCcc--eeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccc--ccccccc-
Q 004195 637 AEARGKGS--AEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGT--DEARKSI- 710 (769)
Q Consensus 637 ~~~~~~~~--~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~- 710 (769)
........ ...+.-|++||.+.+ ..|+..+||||.|||+.||+-|.|.|.+.........+...++. ++.|.++
T Consensus 151 f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~ 230 (318)
T KOG0659|consen 151 FGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMT 230 (318)
T ss_pred cCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCcccc
Confidence 76544322 234445567887665 56999999999999999999999988776543332223223332 2222222
Q ss_pred --cC--------ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 711 --VD--------PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 711 --~d--------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.| +......-+....++.+++.+++..||.+|+|+.|+++|.+|..
T Consensus 231 ~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~ 286 (318)
T KOG0659|consen 231 SLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKS 286 (318)
T ss_pred ccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhc
Confidence 11 11111122234455799999999999999999999999999985
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-42 Score=348.12 Aligned_cols=253 Identities=20% Similarity=0.294 Sum_probs=209.8
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
.++|+..++||+|+||.||.++.+ +++.+|+|++++.. ....+...+|..||.+++||.||+++..|++..
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~----- 98 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEE----- 98 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCC-----
Confidence 357899999999999999999965 69999999998764 234467889999999999999999998888744
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
.+|+|+||+.||.|..+|.+.+ .+++....-++.+|+.||.|||+. +||||||||+|||+|++|+++|+|||++
T Consensus 99 --kLylVld~~~GGeLf~hL~~eg-~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~ 172 (357)
T KOG0598|consen 99 --KLYLVLDYLNGGELFYHLQREG-RFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLC 172 (357)
T ss_pred --eEEEEEeccCCccHHHHHHhcC-CcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccc
Confidence 4999999999999999999776 688888888999999999999999 9999999999999999999999999999
Q ss_pred hhhhcc--CCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHh-hhhhcccccccccccc
Q 004195 635 LLAEAR--GKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKD-LLQVNIGTDEARKSIV 711 (769)
Q Consensus 635 ~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 711 (769)
+..... ...+.+++..|++||++.+..|+..+|.||+||++|||++|.+||.........+ +.....
T Consensus 173 k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~---------- 242 (357)
T KOG0598|consen 173 KEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKL---------- 242 (357)
T ss_pred hhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcC----------
Confidence 754332 3344577888999999999999999999999999999999999998765433222 221110
Q ss_pred CccccCCCCHHHHHHHHHHHHHcCcCCCCCCC----CHHHHHHHhHhhhh
Q 004195 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRP----SVEDTLWNLQFATQ 757 (769)
Q Consensus 712 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP----s~~evl~~l~~~~~ 757 (769)
...+.-...+..+++.+.+..||++|. .+.+|-+|++|...
T Consensus 243 -----~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~i 287 (357)
T KOG0598|consen 243 -----PLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGI 287 (357)
T ss_pred -----CCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccC
Confidence 011111233488999999999999994 78999999998654
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-42 Score=353.68 Aligned_cols=259 Identities=22% Similarity=0.363 Sum_probs=203.6
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
++...+.||+|+||+||++... +|...|||.+........+.+.+|+.+|.+++|||||+++|....... ..++
T Consensus 18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~-----~~~~ 92 (313)
T KOG0198|consen 18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSREN-----DEYN 92 (313)
T ss_pred hhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccC-----eeeE
Confidence 4666799999999999999976 599999999986633335668999999999999999999997543221 2489
Q ss_pred EEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC-CceeeecCCCCchhhh
Q 004195 560 LIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE-NFHVKINSYNLPLLAE 638 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~-~~~~kl~DFGla~~~~ 638 (769)
+.|||+++|+|.+++.+.+..+++..+.++++||++||+|||++ +||||||||+|||++. ++.+||+|||+++...
T Consensus 93 i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~ 169 (313)
T KOG0198|consen 93 IFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKLE 169 (313)
T ss_pred eeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCccccccc
Confidence 99999999999999996654799999999999999999999999 9999999999999999 7999999999997654
Q ss_pred c-----cCCcceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccC
Q 004195 639 A-----RGKGSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVD 712 (769)
Q Consensus 639 ~-----~~~~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 712 (769)
. .......++..|++||++..+ ....++||||+||++.||+||++||... .............. .-
T Consensus 170 ~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-~~~~~~~~~ig~~~-------~~ 241 (313)
T KOG0198|consen 170 SKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-FEEAEALLLIGRED-------SL 241 (313)
T ss_pred cccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-cchHHHHHHHhccC-------CC
Confidence 2 112234556778889998753 2345999999999999999999999763 11111111111100 11
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 713 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
|. .++..+.+..+++.+|++.||++|||++++++|++......
T Consensus 242 P~----ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 242 PE----IPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI 284 (313)
T ss_pred CC----CCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence 22 23334445899999999999999999999999999865443
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-42 Score=379.57 Aligned_cols=253 Identities=23% Similarity=0.370 Sum_probs=209.5
Q ss_pred CCcCccccCCceeEEEEEeC------CCcEEEEEEccccCCC-ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 483 DSSSFMCDASHGQIYKGKLT------DGTLVAIRSLKMSKKS-SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 483 ~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
...+.||+|+||.||+|+.. +...||||.++..... ..++|+||+++++.++|||||+++|+|.+++.
T Consensus 489 ~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P----- 563 (774)
T KOG1026|consen 489 VFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDP----- 563 (774)
T ss_pred eehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCe-----
Confidence 34578999999999999843 3568999999876544 56789999999999999999999999997554
Q ss_pred ceEEEEEeccCCCchhhhhcC---------CC----CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC
Q 004195 556 SIIYLIFEYAPNETLRSFISG---------PG----YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE 622 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~---------~~----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~ 622 (769)
.++|+|||..|||.++|+. .+ .+|+-.+.+.||.|||.|++||-++ .+|||||-.+|+|+.+
T Consensus 564 --~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge 638 (774)
T KOG1026|consen 564 --LCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGE 638 (774)
T ss_pred --eEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceecc
Confidence 8999999999999999971 11 2388999999999999999999998 9999999999999999
Q ss_pred CceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhh
Q 004195 623 NFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLL 697 (769)
Q Consensus 623 ~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~ 697 (769)
+..+||+|||+++..-..++ +.......||+||.+..++||++||||||||||||+++ |+.|+.+...+.+-+.+
T Consensus 639 ~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i 718 (774)
T KOG1026|consen 639 NLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECI 718 (774)
T ss_pred ceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHH
Confidence 99999999999975432221 12334457899999999999999999999999999999 99999876665555544
Q ss_pred hhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 698 QVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 698 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
+.. .+ -.+++.++.++.+||..||+.+|++||+++||-..|+...+..
T Consensus 719 ~~g-------------~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s 766 (774)
T KOG1026|consen 719 RAG-------------QL-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQAS 766 (774)
T ss_pred HcC-------------Cc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcC
Confidence 321 11 2345555566999999999999999999999999998776543
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-42 Score=359.19 Aligned_cols=252 Identities=19% Similarity=0.323 Sum_probs=210.8
Q ss_pred CCCCcCccccCCceeEEEEEe-CCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 481 CFDSSSFMCDASHGQIYKGKL-TDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
.|..-..||+|+.|.||.|+. .+++.||||++.......++-+.+|+.+|+..+|+|||.+++.|...+ .+|
T Consensus 274 ~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~d-------eLW 346 (550)
T KOG0578|consen 274 KYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGD-------ELW 346 (550)
T ss_pred hhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccc-------eeE
Confidence 466678999999999999985 478999999999887777788999999999999999999999887643 389
Q ss_pred EEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhc
Q 004195 560 LIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEA 639 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~ 639 (769)
+|||||++|+|.|.+... .+++.++..|++++++||+|||.+ +|+|||||.+|||++.+|.+||+|||++..+..
T Consensus 347 VVMEym~ggsLTDvVt~~--~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~ 421 (550)
T KOG0578|consen 347 VVMEYMEGGSLTDVVTKT--RMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISE 421 (550)
T ss_pred EEEeecCCCchhhhhhcc--cccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeecccc
Confidence 999999999999999755 489999999999999999999999 999999999999999999999999999855433
Q ss_pred c--CCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccC
Q 004195 640 R--GKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMN 717 (769)
Q Consensus 640 ~--~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 717 (769)
. ...+..++.+|++||+..+..|++|.||||||++++||+-|.|||-.+.......++..... |.+
T Consensus 422 ~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~----------P~l-- 489 (550)
T KOG0578|consen 422 EQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGT----------PKL-- 489 (550)
T ss_pred ccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCC----------CCc--
Confidence 3 34555677788999999999999999999999999999999999874333322232221111 111
Q ss_pred CCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 718 ECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 718 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
..++..+..+.+++.+||+.|+++||++.|+|+|+++..
T Consensus 490 k~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~ 528 (550)
T KOG0578|consen 490 KNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKM 528 (550)
T ss_pred CCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhh
Confidence 122334455999999999999999999999999999843
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-42 Score=354.53 Aligned_cols=268 Identities=22% Similarity=0.316 Sum_probs=208.6
Q ss_pred cCCCCcCccccCCceeEEEEEe-CCCcEEEEEEccccCCCChh-HHHHHHHHHhhcc-CCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKL-TDGTLVAIRSLKMSKKSSPH-MYTYHIELISKLR-HSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~~~~~-~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
++|...+.||.|.||.||+|+- .+|+.||||+++..-...++ .=.||+..|+++. |||||++.+++.+.+.
T Consensus 10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~------ 83 (538)
T KOG0661|consen 10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDR------ 83 (538)
T ss_pred HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCc------
Confidence 4677789999999999999995 47999999999865433222 2468999999998 9999999999987542
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
.+|+|||||+ .+|+++++.+++.+++..++.|+.||++||+|+|.+ |+.|||+||+|||+.....+||+|||+|+.
T Consensus 84 ~L~fVfE~Md-~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARe 159 (538)
T KOG0661|consen 84 ILYFVFEFMD-CNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLARE 159 (538)
T ss_pred eEeeeHHhhh-hhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEecccccccc
Confidence 4999999997 599999997788999999999999999999999999 999999999999999899999999999987
Q ss_pred hhccCCcceeecC-CCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCch-hHHHHhhhhhcccccc--cccc--
Q 004195 637 AEARGKGSAEVSS-PAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENV-VVLVKDLLQVNIGTDE--ARKS-- 709 (769)
Q Consensus 637 ~~~~~~~~~~~~~-~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~-~~~~~~~~~~~~~~~~--~~~~-- 709 (769)
......-+..+.+ -|++||++.+ +-|+.+.||||+|||++|+.+-+|.|.+.. .+.+.++..+ ++.+. .+.+
T Consensus 160 v~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~V-LGtP~~~~~~eg~ 238 (538)
T KOG0661|consen 160 VRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEV-LGTPDKDSWPEGY 238 (538)
T ss_pred cccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHH-hCCCccccchhHH
Confidence 7554433333333 4467887654 568999999999999999999999887644 3444444433 22221 1111
Q ss_pred -------ccCccccC----CCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 710 -------IVDPAVMN----ECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 710 -------~~d~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
+--|...+ ..-+....++.+++.+|+++||++|||++|+++|++|....
T Consensus 239 ~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~ 298 (538)
T KOG0661|consen 239 NLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGR 298 (538)
T ss_pred HHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccccccc
Confidence 00011111 11112455689999999999999999999999999987543
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-41 Score=331.28 Aligned_cols=270 Identities=18% Similarity=0.290 Sum_probs=210.7
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.+.|+..+.|++|.||.||+|+.+ +++.||+|+++..... -.-...|||.+|.+++|||||.+..+....+.
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~----- 149 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNM----- 149 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccc-----
Confidence 345777899999999999999976 7999999999876422 23456899999999999999999998875443
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
+.+|+|||||+. ||..++..-..++...+++.+..|+++|++|||.. .|+||||||+|+|+...|.+||+|||+|+
T Consensus 150 d~iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR 225 (419)
T KOG0663|consen 150 DKIYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAR 225 (419)
T ss_pred ceeeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhh
Confidence 348999999985 99999986666899999999999999999999999 99999999999999999999999999998
Q ss_pred hhhccC--CcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhh-ccccccccccc
Q 004195 636 LAEARG--KGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQV-NIGTDEARKSI 710 (769)
Q Consensus 636 ~~~~~~--~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~-~~~~~~~~~~~ 710 (769)
.+.... .+...++--|++||.+.+ ..|++..||||+|||+.|+++++|.|.+.... .+..+.+. ..+.+..|..+
T Consensus 226 ~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~ 305 (419)
T KOG0663|consen 226 EYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGY 305 (419)
T ss_pred hhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCc
Confidence 876553 233344555667887665 46899999999999999999999998775433 33333322 22222233332
Q ss_pred cCccc--------------cCCCCHH-HHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 711 VDPAV--------------MNECSDE-SLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 711 ~d~~~--------------~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
..... ...+... ..+.-.+|+...+..||++|.|++|.++|-||.+.
T Consensus 306 ~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~ 367 (419)
T KOG0663|consen 306 SELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRET 367 (419)
T ss_pred cccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccC
Confidence 22111 1111111 23567899999999999999999999999999874
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-41 Score=357.49 Aligned_cols=254 Identities=20% Similarity=0.273 Sum_probs=209.7
Q ss_pred HHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc----CC-CChhHHHHHHHHHhhcc-CCceeeEeeeeeccC
Q 004195 477 EATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS----KK-SSPHMYTYHIELISKLR-HSNLVSALGHCLDFS 549 (769)
Q Consensus 477 ~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~----~~-~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~ 549 (769)
...+.|...+.||+|+||.||.|+.. +|+.||||.+... .. ...+.+.+|+.++++++ ||||+++++++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 34567888999999999999999865 7899999977654 11 23456778999999999 999999999998744
Q ss_pred CCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC-ceeee
Q 004195 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN-FHVKI 628 (769)
Q Consensus 550 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~-~~~kl 628 (769)
.+++||||+.+|+|.+++.+. ..+.+....+++.|++.|++|+|+. +|+||||||+|||+|.+ +++||
T Consensus 94 -------~~~ivmEy~~gGdL~~~i~~~-g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl 162 (370)
T KOG0583|consen 94 -------KIYIVMEYCSGGDLFDYIVNK-GRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKL 162 (370)
T ss_pred -------eEEEEEEecCCccHHHHHHHc-CCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEE
Confidence 399999999999999999974 4789999999999999999999999 99999999999999999 99999
Q ss_pred cCCCCchhhh--ccCCcceeecCCCcchhhhccCC-C-CCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhh-hhhcccc
Q 004195 629 NSYNLPLLAE--ARGKGSAEVSSPAKKTSVLARTE-Q-DDKSDVYDIGIILIEIIVGRPITSENVVVLVKDL-LQVNIGT 703 (769)
Q Consensus 629 ~DFGla~~~~--~~~~~~~~~~~~~~~pe~~~~~~-~-~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~-~~~~~~~ 703 (769)
+|||++.... .....+.+++..|.+||.+.+.. | +.++||||+||+||.|++|+.||++......... ....+..
T Consensus 163 ~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~ 242 (370)
T KOG0583|consen 163 SDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKI 242 (370)
T ss_pred eccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccC
Confidence 9999998773 33455667788889999998877 8 4899999999999999999999987443322221 1111111
Q ss_pred ccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 704 DEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 704 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
| .... ..++.+++.+|+..||.+|+|+.||+.|+|+..
T Consensus 243 ---------p---~~~~---S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 243 ---------P---SYLL---SPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred ---------C---CCcC---CHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 1 1110 344899999999999999999999999999997
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=338.34 Aligned_cols=262 Identities=18% Similarity=0.237 Sum_probs=206.4
Q ss_pred cCCCCcCccccCCceeEEEEEe-CCCcEEEEEEccccCCCCh-hHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKL-TDGTLVAIRSLKMSKKSSP-HMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~~~~-~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|+..+.||.|..++||+|+. +.++.||||++...+.... +.+.+|+..|+.++||||++++..|.....
T Consensus 26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~------- 98 (516)
T KOG0582|consen 26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSE------- 98 (516)
T ss_pred cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecce-------
Confidence 4688889999999999999995 4789999999987765444 789999999999999999999998876443
Q ss_pred EEEEEeccCCCchhhhhcC-CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 558 IYLIFEYAPNETLRSFISG-PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
+|+||.||.+||+.++++. -...+++..+..|.+++++||.|||++ |.||||||+.|||||.+|.+||+|||.+-.
T Consensus 99 LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~ 175 (516)
T KOG0582|consen 99 LWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSAS 175 (516)
T ss_pred eEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeee
Confidence 9999999999999999982 223589999999999999999999999 999999999999999999999999998743
Q ss_pred hhccCC------cceeecCCCcchhhhc--cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHH-Hhhhhhcccccccc
Q 004195 637 AEARGK------GSAEVSSPAKKTSVLA--RTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLV-KDLLQVNIGTDEAR 707 (769)
Q Consensus 637 ~~~~~~------~~~~~~~~~~~pe~~~--~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~ 707 (769)
+-..+. .+..++.+|++||++. ...|+.|+||||||++..||++|..||.......+ ...++.......
T Consensus 176 l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~-- 253 (516)
T KOG0582|consen 176 LFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLL-- 253 (516)
T ss_pred ecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcc--
Confidence 322222 2224567788999843 35799999999999999999999999987553322 111221111000
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 708 KSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 708 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
....| .+........+.+++..|+++||++|||++++++|.||...
T Consensus 254 t~~~~----~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~ 299 (516)
T KOG0582|consen 254 TSGLD----KDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKA 299 (516)
T ss_pred cccCC----hHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhc
Confidence 01111 11122334568999999999999999999999999999754
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-41 Score=350.60 Aligned_cols=256 Identities=20% Similarity=0.321 Sum_probs=213.3
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
++|.+.+.||+|+||.||||+.+ +.+.||+|.+.+.++.. -+.+.+|++|+++++|||||.++++|++..
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~------- 74 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSA------- 74 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccc-------
Confidence 46778899999999999999976 68999999998765443 356899999999999999999999998744
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
++++|.|||.| +|+.++...+ .+++..+..|+.+++.||.|||+. +|+|||+||.|||++..|.+|++|||+|+.
T Consensus 75 ~~~vVte~a~g-~L~~il~~d~-~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~ 149 (808)
T KOG0597|consen 75 HLWVVTEYAVG-DLFTILEQDG-KLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARA 149 (808)
T ss_pred eEEEEehhhhh-hHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhh
Confidence 49999999975 9999998665 799999999999999999999999 999999999999999999999999999988
Q ss_pred hhccCC--cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCcc
Q 004195 637 AEARGK--GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 637 ~~~~~~--~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
+..+.. ....+++.|++||...+..|+..+|.||+|||+||+++|+|||.........+.+. . ||.
T Consensus 150 m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~---~---------d~v 217 (808)
T KOG0597|consen 150 MSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSIL---K---------DPV 217 (808)
T ss_pred cccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHh---c---------CCC
Confidence 765432 23345677889999999999999999999999999999999998655333222221 1 111
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcccc
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQGLK 762 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~~~ 762 (769)
.++......+..++...+.+||.+|.|-.+++.|++....+....
T Consensus 218 ---~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~~~~~~ 262 (808)
T KOG0597|consen 218 ---KPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGKINIAE 262 (808)
T ss_pred ---CCcccccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhhhhhhc
Confidence 122244455889999999999999999999999999876654433
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-41 Score=315.32 Aligned_cols=252 Identities=20% Similarity=0.286 Sum_probs=212.9
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|+..+.||+|.||.||.|+.+ ++-.||+|++.+.. .+-.+++.+|++|-+.++||||.++|+||.+...
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~r----- 96 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKR----- 96 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccce-----
Confidence 45889999999999999999976 68899999997653 3446789999999999999999999999998554
Q ss_pred ceEEEEEeccCCCchhhhhc-CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 556 SIIYLIFEYAPNETLRSFIS-GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
.||++||.++|++...|. .....+++.....+..|+|.||.|+|.. +||||||||+|+|++.++..|++|||-+
T Consensus 97 --iyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGws 171 (281)
T KOG0580|consen 97 --IYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWS 171 (281)
T ss_pred --eEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCce
Confidence 899999999999999998 3334688888999999999999999998 9999999999999999999999999998
Q ss_pred hhhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhccccccccccccCc
Q 004195 635 LLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
.........+.+++.-|.+||...+...+.++|+|++||+.||++.|.+||...... ...++.... +.+|
T Consensus 172 V~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~---------~~~p 242 (281)
T KOG0580|consen 172 VHAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVD---------LKFP 242 (281)
T ss_pred eecCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHcc---------ccCC
Confidence 776656666677777888899888889999999999999999999999999765433 233322221 1222
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
+.....+.++|.+|+..+|.+|.+..|++.|+|..+.
T Consensus 243 -------~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a~ 279 (281)
T KOG0580|consen 243 -------STISGGAADLISRLLVKNPIERLALTEVMDHPWIVAN 279 (281)
T ss_pred -------cccChhHHHHHHHHhccCccccccHHHHhhhHHHHhc
Confidence 2223348899999999999999999999999998653
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-41 Score=355.60 Aligned_cols=251 Identities=20% Similarity=0.275 Sum_probs=209.6
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC---CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK---SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
-|+..+.||+|+.|.|-.|++. +|+.+|||++.+... .....+++||-||+-+.||||+++|+++++..+
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~------ 86 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQH------ 86 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCce------
Confidence 3566789999999999999965 899999999986522 223568999999999999999999999987544
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
+|+|.||+++|.|++++-+.+ ++++.+..+++.||+.|+.|+|.. +|+|||+||+|+|+|+++++||+|||+|.+
T Consensus 87 -lylvlEyv~gGELFdylv~kG-~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsL 161 (786)
T KOG0588|consen 87 -LYLVLEYVPGGELFDYLVRKG-PLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASL 161 (786)
T ss_pred -EEEEEEecCCchhHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeec
Confidence 999999999999999998776 789999999999999999999999 999999999999999999999999999976
Q ss_pred hhccC-CcceeecCCCcchhhhccCCC-CCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCcc
Q 004195 637 AEARG-KGSAEVSSPAKKTSVLARTEQ-DDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 637 ~~~~~-~~~~~~~~~~~~pe~~~~~~~-~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
...+. -.+.++...|.+||+..+..| +.++||||.|||||.|+||+.||+++....+...++...-
T Consensus 162 e~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f------------ 229 (786)
T KOG0588|consen 162 EVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVF------------ 229 (786)
T ss_pred ccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcc------------
Confidence 54443 344566677788999999888 7899999999999999999999997665444333322110
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
+.|...+.++.+|+.+|+..||++|.|++||++|+|...-
T Consensus 230 ---~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~ 269 (786)
T KOG0588|consen 230 ---EMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGY 269 (786)
T ss_pred ---cCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcC
Confidence 1122333448999999999999999999999999997653
|
|
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-41 Score=336.05 Aligned_cols=267 Identities=19% Similarity=0.317 Sum_probs=203.6
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
.|...+++|+|+||.||+|+.. +++.||||++-...+ .-.+|+++|++++|||||+|.-+|...... .+-...
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~--d~~~ln 98 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTES--DEVYLN 98 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCC--chhHHH
Confidence 4556799999999999999965 689999999864432 335789999999999999999888764432 234567
Q ss_pred EEEeccCCCchhhhhcC---CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC-ceeeecCCCCch
Q 004195 560 LIFEYAPNETLRSFISG---PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN-FHVKINSYNLPL 635 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~-~~~kl~DFGla~ 635 (769)
+||||||. +|.+.++. .+..++...++-+..|+.+||+|||+. +|+||||||+|+|+|.+ |.+||+|||.|+
T Consensus 99 lVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK 174 (364)
T KOG0658|consen 99 LVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAK 174 (364)
T ss_pred HHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcce
Confidence 89999985 99999872 344688888899999999999999998 99999999999999976 999999999998
Q ss_pred hhhccCCcc-eeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhccccc--ccc---
Q 004195 636 LAEARGKGS-AEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIGTD--EAR--- 707 (769)
Q Consensus 636 ~~~~~~~~~-~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~~~--~~~--- 707 (769)
....+.... ...+..|++||.+.+ ..|+.+.||||.|||+.||+-|++.|.+.... ....++.. ++.+ +..
T Consensus 175 ~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~-lG~Pt~e~I~~m 253 (364)
T KOG0658|consen 175 VLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKV-LGTPTREDIKSM 253 (364)
T ss_pred eeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHH-hCCCCHHHHhhc
Confidence 776554433 344567788887765 57999999999999999999999998775433 33333322 2221 111
Q ss_pred ----ccccCccccCC-----CCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 708 ----KSIVDPAVMNE-----CSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 708 ----~~~~d~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
.+.-.|.+... .......+..+++.++++.+|.+|.++.|++.|++|-+-.
T Consensus 254 n~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr 313 (364)
T KOG0658|consen 254 NPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELR 313 (364)
T ss_pred CcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhh
Confidence 11111222111 1222344589999999999999999999999999997643
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-39 Score=337.16 Aligned_cols=264 Identities=21% Similarity=0.313 Sum_probs=203.4
Q ss_pred ccccCHHHHHHHhcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCC---hhHHHHHHHHHhhccCCceeeEee
Q 004195 467 YRTFTLDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSS---PHMYTYHIELISKLRHSNLVSALG 543 (769)
Q Consensus 467 ~~~~~~~el~~~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~---~~~~~~Ei~~l~~l~H~nIv~l~~ 543 (769)
.+.++.+|+. ......||+|++|.||+|++ +|+.||||.++...... .+.+.+|+.++++++|||||+++|
T Consensus 12 ~~~i~~~~i~-----~~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g 85 (283)
T PHA02988 12 IKCIESDDID-----KYTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYG 85 (283)
T ss_pred ceecCHHHcC-----CCCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEee
Confidence 3455666762 33347899999999999998 58899999998654433 356789999999999999999999
Q ss_pred eeeccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC
Q 004195 544 HCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN 623 (769)
Q Consensus 544 ~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~ 623 (769)
++.+... .....++||||+++|+|.+++.... .++|..+.+++.+++.||+|||+.. +++||||||+||+++++
T Consensus 86 ~~~~~~~---~~~~~~lv~Ey~~~g~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~ 159 (283)
T PHA02988 86 FIIDIVD---DLPRLSLILEYCTRGYLREVLDKEK-DLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTEN 159 (283)
T ss_pred eEEeccc---CCCceEEEEEeCCCCcHHHHHhhCC-CCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCC
Confidence 9875211 1234799999999999999998654 6899999999999999999999731 78899999999999999
Q ss_pred ceeeecCCCCchhhhccCCcceeecCCCcchhhhcc--CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcc
Q 004195 624 FHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLAR--TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNI 701 (769)
Q Consensus 624 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~--~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~ 701 (769)
+.+||+|||+++....... ....+..|++||...+ ..++.++|||||||++|||+||+.||...........+...
T Consensus 160 ~~~kl~dfg~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~- 237 (283)
T PHA02988 160 YKLKIICHGLEKILSSPPF-KNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINK- 237 (283)
T ss_pred CcEEEcccchHhhhccccc-cccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc-
Confidence 9999999999876543222 2223456778888765 67899999999999999999999999765433222211100
Q ss_pred ccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 702 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
. ..+.....++ ..+.+++.+||+.||++|||++|+++.+....
T Consensus 238 --~------~~~~~~~~~~----~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 238 --N------NSLKLPLDCP----LEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred --C------CCCCCCCcCc----HHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 0 0111111233 34889999999999999999999999887543
|
|
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=350.20 Aligned_cols=268 Identities=14% Similarity=0.199 Sum_probs=205.5
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|+..+.||+|+||.||+++.. +|..||+|.+..... ...+.+.+|++++++++||||+++++++.+.+ .
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-------~ 77 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-------E 77 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC-------E
Confidence 57889999999999999999976 688999999975422 22357899999999999999999999987643 3
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.++||||+++|+|.+++.... .+++..+..++.|+++||+|||+. .+|+||||||+||+++.++.+||+|||++...
T Consensus 78 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 154 (331)
T cd06649 78 ISICMEHMDGGSLDQVLKEAK-RIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 154 (331)
T ss_pred EEEEeecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHhhc--CCEEcCCCChhhEEEcCCCcEEEccCcccccc
Confidence 899999999999999997544 689999999999999999999974 16999999999999999999999999998655
Q ss_pred hccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccc-ccc-c--------
Q 004195 638 EARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGT-DEA-R-------- 707 (769)
Q Consensus 638 ~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~-~~~-~-------- 707 (769)
.........++..|++||.+.+..++.++|||||||++|||+||+.||...........+...... ... .
T Consensus 155 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (331)
T cd06649 155 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPR 234 (331)
T ss_pred cccccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccc
Confidence 433333334456788899988888999999999999999999999999654333222211110000 000 0
Q ss_pred -----------------------ccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 708 -----------------------KSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 708 -----------------------~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
..+...............++.+++.+||+.||++|||++|+++|+|+...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 307 (331)
T cd06649 235 PPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRS 307 (331)
T ss_pred cccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhc
Confidence 00000000000011233458999999999999999999999999998754
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-40 Score=334.60 Aligned_cols=261 Identities=17% Similarity=0.231 Sum_probs=203.5
Q ss_pred HHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--------------ChhHHHHHHHHHhhccCCceee
Q 004195 476 KEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--------------SPHMYTYHIELISKLRHSNLVS 540 (769)
Q Consensus 476 ~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--------------~~~~~~~Ei~~l~~l~H~nIv~ 540 (769)
.+..+.|+....||+|.||.|-+|+.. +++.||||++.+.... ..+...+||.||++++|||||+
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~ 172 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK 172 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence 345578999999999999999999965 7999999999754211 1247889999999999999999
Q ss_pred EeeeeeccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceee
Q 004195 541 ALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLL 620 (769)
Q Consensus 541 l~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl 620 (769)
|+.+..+. ..+.+|||+|||..|.+...=- ....+++.+.++|++++..||+|||.+ +||||||||+|+|+
T Consensus 173 LiEvLDDP-----~s~~~YlVley~s~G~v~w~p~-d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl 243 (576)
T KOG0585|consen 173 LIEVLDDP-----ESDKLYLVLEYCSKGEVKWCPP-DKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLL 243 (576)
T ss_pred EEEeecCc-----ccCceEEEEEeccCCccccCCC-CcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEE
Confidence 99987653 4556999999999888764332 222389999999999999999999999 99999999999999
Q ss_pred CCCceeeecCCCCchhhhccC-------CcceeecCCCcchhhhccCC----CCCCCCeeehhHHHHHHHhCCCCCCCch
Q 004195 621 DENFHVKINSYNLPLLAEARG-------KGSAEVSSPAKKTSVLARTE----QDDKSDVYDIGIILIEIIVGRPITSENV 689 (769)
Q Consensus 621 d~~~~~kl~DFGla~~~~~~~-------~~~~~~~~~~~~pe~~~~~~----~~~ksDVwS~Gvil~elltG~~p~~~~~ 689 (769)
+++|++||+|||.+....... -....+++.+++||...++. .+.+.||||+||+||-|+.|+.||.++.
T Consensus 244 ~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~ 323 (576)
T KOG0585|consen 244 SSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDF 323 (576)
T ss_pred cCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccch
Confidence 999999999999986542211 12234566678888766522 3678999999999999999998887654
Q ss_pred h-HHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 690 V-VLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 690 ~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
. +...+++...+.. ++ .++..+.+.+|+.++|.+||++|.+..+|..|+|......
T Consensus 324 ~~~l~~KIvn~pL~f-------------P~-~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g~ 380 (576)
T KOG0585|consen 324 ELELFDKIVNDPLEF-------------PE-NPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDGD 380 (576)
T ss_pred HHHHHHHHhcCcccC-------------CC-cccccHHHHHHHHHHhhcChhheeehhhheecceeccCCC
Confidence 3 3333333221111 11 1244556899999999999999999999999999876543
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=343.18 Aligned_cols=255 Identities=15% Similarity=0.200 Sum_probs=200.4
Q ss_pred CCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC---CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 482 FDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK---SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
|+..+.||+|+||.||+|... +|+.||||.+..... .....+.+|++++++++|+||+++++++.+.+ .
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~-------~ 74 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKD-------A 74 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCC-------e
Confidence 667889999999999999964 799999999875422 22346788999999999999999999987643 3
Q ss_pred EEEEEeccCCCchhhhhcC-CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 558 IYLIFEYAPNETLRSFISG-PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
.++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++..
T Consensus 75 ~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~ 151 (285)
T cd05631 75 LCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQ 151 (285)
T ss_pred EEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEE
Confidence 8999999999999988763 233689999999999999999999998 999999999999999999999999999865
Q ss_pred hhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccc
Q 004195 637 AEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAV 715 (769)
Q Consensus 637 ~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 715 (769)
...... ....++..|++||.+.+..++.++|||||||++|||++|+.||...........+..... .+
T Consensus 152 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~---------~~-- 220 (285)
T cd05631 152 IPEGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVK---------ED-- 220 (285)
T ss_pred cCCCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhh---------cc--
Confidence 432221 222345677889999888999999999999999999999999975432111111110000 00
Q ss_pred cCCCCHHHHHHHHHHHHHcCcCCCCCCCC-----HHHHHHHhHhhhh
Q 004195 716 MNECSDESLKRMMELCLRCLSNEPKDRPS-----VEDTLWNLQFATQ 757 (769)
Q Consensus 716 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~l~~~~~ 757 (769)
...++......+.+++.+||+.||++||+ ++|+++|+||...
T Consensus 221 ~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05631 221 QEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNI 267 (285)
T ss_pred cccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCC
Confidence 01112223345889999999999999997 9999999998754
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=324.59 Aligned_cols=273 Identities=20% Similarity=0.284 Sum_probs=207.2
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc--CCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS--KKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
....|...+.||+|+||.|.+|... +|+.||||++... .....+...||+++++.++|+|||.+++.+..+.. ..
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~--~~ 97 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSR--DK 97 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccc--cc
Confidence 3345555789999999999999975 7999999999733 33445778999999999999999999999875222 23
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
...+|+|+|+|+ -||...++.+. .|+......+..|+++||.|+|+. +|+|||+||+|++++.+...||+|||+|
T Consensus 98 f~DvYiV~elMe-tDL~~iik~~~-~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGLA 172 (359)
T KOG0660|consen 98 FNDVYLVFELME-TDLHQIIKSQQ-DLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGLA 172 (359)
T ss_pred cceeEEehhHHh-hHHHHHHHcCc-cccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccce
Confidence 456899999995 69999998654 589999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhc----cCCcceeecCCCcchhhhc-cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccc--cc
Q 004195 635 LLAEA----RGKGSAEVSSPAKKTSVLA-RTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDE--AR 707 (769)
Q Consensus 635 ~~~~~----~~~~~~~~~~~~~~pe~~~-~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~--~~ 707 (769)
+.... ...+....+..|.+||.+. ...||...||||.|||+.||++|++.|.+.........+....+.+. ..
T Consensus 173 R~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l 252 (359)
T KOG0660|consen 173 RYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDL 252 (359)
T ss_pred eeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHH
Confidence 88753 2223344455667788754 56799999999999999999999998876543332222222222221 11
Q ss_pred ccccC----------ccccC----CCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 708 KSIVD----------PAVMN----ECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 708 ~~~~d----------~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
..+-. |.... ..-+.....+++|+.+|+..||.+|+|++|+++|++++.-
T Consensus 253 ~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~ 316 (359)
T KOG0660|consen 253 QKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPY 316 (359)
T ss_pred HHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhh
Confidence 11110 00000 0001223348899999999999999999999999998753
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=338.65 Aligned_cols=248 Identities=20% Similarity=0.382 Sum_probs=200.5
Q ss_pred cCHHHHHHHhcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccC
Q 004195 470 FTLDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFS 549 (769)
Q Consensus 470 ~~~~el~~~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~ 549 (769)
+.+++|.+ .+-+|+|+.|.||.|+++ ++.||||+++.. -+.+|+-|++|+||||+.+.|+|..
T Consensus 121 iPFe~IsE-------LeWlGSGaQGAVF~Grl~-netVAVKKV~el-------kETdIKHLRkLkH~NII~FkGVCtq-- 183 (904)
T KOG4721|consen 121 IPFEEISE-------LEWLGSGAQGAVFLGRLH-NETVAVKKVREL-------KETDIKHLRKLKHPNIITFKGVCTQ-- 183 (904)
T ss_pred CCHHHhhh-------hhhhccCcccceeeeecc-CceehhHHHhhh-------hhhhHHHHHhccCcceeeEeeeecC--
Confidence 44666643 478999999999999996 688999998733 2346888999999999999999975
Q ss_pred CCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeec
Q 004195 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKIN 629 (769)
Q Consensus 550 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~ 629 (769)
...++||||||+.|.|+.+|+... .++-.....+..+||.|+.|||.+ .|||||||+-||||..+..+||+
T Consensus 184 -----sPcyCIiMEfCa~GqL~~VLka~~-~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIs 254 (904)
T KOG4721|consen 184 -----SPCYCIIMEFCAQGQLYEVLKAGR-PITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKIS 254 (904)
T ss_pred -----CceeEEeeeccccccHHHHHhccC-ccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEec
Confidence 345899999999999999998654 677788889999999999999999 99999999999999999999999
Q ss_pred CCCCchhhhccC-CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccc
Q 004195 630 SYNLPLLAEARG-KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARK 708 (769)
Q Consensus 630 DFGla~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (769)
|||.++...... ....+++..||+||++.....++|+||||||||||||+||..||.+..... ++ +.++.
T Consensus 255 DFGTS~e~~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssA---II-wGVGs----- 325 (904)
T KOG4721|consen 255 DFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSA---II-WGVGS----- 325 (904)
T ss_pred cccchHhhhhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhe---eE-EeccC-----
Confidence 999997665432 233456678899999999999999999999999999999999987533211 11 11111
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
..+.-.+...|++. +.-|++.||+..|..||++.+|+.|+..+.
T Consensus 326 NsL~LpvPstcP~G----fklL~Kqcw~sKpRNRPSFrqil~HldIa~ 369 (904)
T KOG4721|consen 326 NSLHLPVPSTCPDG----FKLLLKQCWNSKPRNRPSFRQILLHLDIAS 369 (904)
T ss_pred CcccccCcccCchH----HHHHHHHHHhcCCCCCccHHHHHHHHhhcC
Confidence 11112222345554 888899999999999999999999998753
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-39 Score=345.43 Aligned_cols=245 Identities=17% Similarity=0.213 Sum_probs=197.7
Q ss_pred CccccCCceeEEEEEeC-CCcEEEEEEccccCC---CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEE
Q 004195 486 SFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK---SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLI 561 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV 561 (769)
+.||+|+||.||+|+.. +|+.||||+++.... .....+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~-------~~~lv 73 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHD-------RLCFV 73 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCC-------EEEEE
Confidence 46999999999999965 789999999975421 22346778999999999999999999987643 48999
Q ss_pred EeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhcc-
Q 004195 562 FEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEAR- 640 (769)
Q Consensus 562 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~- 640 (769)
|||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 74 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 149 (323)
T cd05571 74 MEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG 149 (323)
T ss_pred EeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC
Confidence 99999999999997554 689999999999999999999999 9999999999999999999999999998643221
Q ss_pred -CCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccCCC
Q 004195 641 -GKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNEC 719 (769)
Q Consensus 641 -~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 719 (769)
......++..|++||.+.+..++.++|||||||++|||+||+.||...........+... +..+....
T Consensus 150 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~-----------~~~~p~~~ 218 (323)
T cd05571 150 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME-----------EIRFPRTL 218 (323)
T ss_pred CcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcC-----------CCCCCCCC
Confidence 122234556788999998888999999999999999999999999765433222211100 11111223
Q ss_pred CHHHHHHHHHHHHHcCcCCCCCCC-----CHHHHHHHhHhhh
Q 004195 720 SDESLKRMMELCLRCLSNEPKDRP-----SVEDTLWNLQFAT 756 (769)
Q Consensus 720 ~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~~~~ 756 (769)
+ .++.+++.+||+.||++|| ++.++++|+||..
T Consensus 219 ~----~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~ 256 (323)
T cd05571 219 S----PEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFAS 256 (323)
T ss_pred C----HHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 3 3488999999999999999 8999999999864
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-40 Score=345.15 Aligned_cols=254 Identities=20% Similarity=0.307 Sum_probs=201.2
Q ss_pred CCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 481 CFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
.+.....||+|+||+||+|++.. .||||.+....... .+.|+.|+..+++-||.||+-+.|||..+. .
T Consensus 393 ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~--------~ 462 (678)
T KOG0193|consen 393 EVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPP--------L 462 (678)
T ss_pred Hhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCc--------e
Confidence 34456899999999999999853 59999998765443 367999999999999999999999998633 4
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh-
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA- 637 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~- 637 (769)
.||+.+|+|-+|+.+++.....++..+...||+|||+|+.|||.+ +|||||||..||++.+++.|||+|||++...
T Consensus 463 AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~ 539 (678)
T KOG0193|consen 463 AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGLATVKT 539 (678)
T ss_pred eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecccceeeee
Confidence 899999999999999997777899999999999999999999999 9999999999999999999999999998432
Q ss_pred ---hccCCcceeecCCCcchhhhcc---CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccccccc
Q 004195 638 ---EARGKGSAEVSSPAKKTSVLAR---TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIV 711 (769)
Q Consensus 638 ---~~~~~~~~~~~~~~~~pe~~~~---~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (769)
.........+..-|++||++.. .+|++.+||||||||+|||+||..||.....+.+.. . ++......+..
T Consensus 540 ~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIif--m--VGrG~l~pd~s 615 (678)
T KOG0193|consen 540 RWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIF--M--VGRGYLMPDLS 615 (678)
T ss_pred eeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEE--E--ecccccCccch
Confidence 1222333445566788998754 468999999999999999999999998443332211 1 11111111111
Q ss_pred CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 712 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.....+.+++.+|+..||..++++||.+.+|+..+.....
T Consensus 616 ------~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 616 ------KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred ------hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 1122344569999999999999999999999997775544
|
|
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-39 Score=339.74 Aligned_cols=264 Identities=20% Similarity=0.329 Sum_probs=199.7
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|...+.||+|+||.||+|+.+ +++.||+|.++.... .....+.+|++++++++||||+++++++.+.. .
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-------~ 77 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTER-------C 77 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCC-------e
Confidence 46888899999999999999976 689999999975432 23456789999999999999999999987533 4
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.++||||++ |+|.+++...+..+++..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 78 ~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~ 153 (288)
T cd07871 78 LTLVFEYLD-SDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAK 153 (288)
T ss_pred EEEEEeCCC-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeec
Confidence 899999997 599998876555689999999999999999999998 9999999999999999999999999998654
Q ss_pred hccC--CcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccc--cccccccc--
Q 004195 638 EARG--KGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIG--TDEARKSI-- 710 (769)
Q Consensus 638 ~~~~--~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~-- 710 (769)
.... .....++..|++||.+.+ ..++.++||||+||++|||+||++||...........+....+ ..+.+..+
T Consensus 154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07871 154 SVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITS 233 (288)
T ss_pred cCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhcccc
Confidence 3221 122334556788887754 5689999999999999999999999976443221111111111 11111111
Q ss_pred -------cCccccCC----CCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 711 -------VDPAVMNE----CSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 711 -------~d~~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
..|..... ..+....++.+++.+|++.||++|||++|+++|+||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 234 NEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred chhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 11111000 001123457899999999999999999999999986
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-39 Score=347.53 Aligned_cols=254 Identities=20% Similarity=0.303 Sum_probs=195.8
Q ss_pred hcCCCCcCccccCCceeEEEEEe------CCCcEEEEEEccccCCC-ChhHHHHHHHHHhhc-cCCceeeEeeeeeccCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKL------TDGTLVAIRSLKMSKKS-SPHMYTYHIELISKL-RHSNLVSALGHCLDFSL 550 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~ 550 (769)
.++|...+.||+|+||.||+|.. .+++.||||+++..... ..+.+.+|+.++.++ +|||||+++++|....
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~- 84 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN- 84 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC-
Confidence 35688889999999999999974 13578999999754322 235688999999999 8999999999986532
Q ss_pred CCCCcceEEEEEeccCCCchhhhhcCCC----------------------------------------------------
Q 004195 551 DDPSISIIYLIFEYAPNETLRSFISGPG---------------------------------------------------- 578 (769)
Q Consensus 551 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~---------------------------------------------------- 578 (769)
...++||||+++|+|.+++....
T Consensus 85 -----~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (338)
T cd05102 85 -----GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNP 159 (338)
T ss_pred -----CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCccccc
Confidence 23799999999999999986321
Q ss_pred ---------CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhccCC----cce
Q 004195 579 ---------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGK----GSA 645 (769)
Q Consensus 579 ---------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~----~~~ 645 (769)
..+++.++.+++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++....... +..
T Consensus 160 ~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~ 236 (338)
T cd05102 160 PQETDDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSA 236 (338)
T ss_pred chhccccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCC
Confidence 2478889999999999999999998 999999999999999999999999999965432211 111
Q ss_pred eecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhH-HHHhhhhhccccccccccccCccccCCCCHHH
Q 004195 646 EVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVV-LVKDLLQVNIGTDEARKSIVDPAVMNECSDES 723 (769)
Q Consensus 646 ~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 723 (769)
..+..|++||.+.+..++.++|||||||++|||++ |+.||...... .....+.. . ..+.....++
T Consensus 237 ~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~----~------~~~~~~~~~~--- 303 (338)
T cd05102 237 RLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKD----G------TRMRAPENAT--- 303 (338)
T ss_pred CCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhc----C------CCCCCCCCCC---
Confidence 22345788998888889999999999999999997 99998753321 11111110 0 0011112223
Q ss_pred HHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 724 LKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 724 ~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
..+.+++.+||+.||++|||+.|+++.+...
T Consensus 304 -~~l~~li~~cl~~dp~~RPs~~el~~~l~~~ 334 (338)
T cd05102 304 -PEIYRIMLACWQGDPKERPTFSALVEILGDL 334 (338)
T ss_pred -HHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 3488999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=342.20 Aligned_cols=250 Identities=15% Similarity=0.244 Sum_probs=202.2
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC---CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK---SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|+..+.||+|+||.||+|+.. +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+..
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~------ 74 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQR------ 74 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCC------
Confidence 46888999999999999999976 689999999975421 23456889999999999999999998887533
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 75 -~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~ 149 (291)
T cd05612 75 -FLYMLMEYVPGGELFSYLRNSG-RFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAK 149 (291)
T ss_pred -eEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcch
Confidence 4899999999999999997554 689999999999999999999998 99999999999999999999999999987
Q ss_pred hhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccc
Q 004195 636 LAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAV 715 (769)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 715 (769)
...... ....++..|++||.+.+..++.++|||||||++|||+||+.||...........+... ...+
T Consensus 150 ~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~-----------~~~~ 217 (291)
T cd05612 150 KLRDRT-WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAG-----------KLEF 217 (291)
T ss_pred hccCCc-ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-----------CcCC
Confidence 654322 2223455678899988888999999999999999999999999765432222211100 0111
Q ss_pred cCCCCHHHHHHHHHHHHHcCcCCCCCCCC-----HHHHHHHhHhhh
Q 004195 716 MNECSDESLKRMMELCLRCLSNEPKDRPS-----VEDTLWNLQFAT 756 (769)
Q Consensus 716 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~l~~~~ 756 (769)
.... ...+.+++.+|++.||.+||+ ++|+++|+|+..
T Consensus 218 ~~~~----~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~ 259 (291)
T cd05612 218 PRHL----DLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKS 259 (291)
T ss_pred CccC----CHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccC
Confidence 1122 234889999999999999995 999999999864
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-39 Score=335.95 Aligned_cols=256 Identities=18% Similarity=0.243 Sum_probs=207.4
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
..++|+....||+|+||.||.|+-+ +|..+|+|++++.. ....+....|-.+|...++|+||+|+..|.+.+.
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~--- 215 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEY--- 215 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCe---
Confidence 5678999999999999999999965 69999999998764 3344567889999999999999999999987554
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
+||||||.||||+..+|.+.+ .|++.....++.+++-|++.+|+. |+|||||||+|+|||..|++|++|||+
T Consensus 216 ----LYLiMEylPGGD~mTLL~~~~-~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGL 287 (550)
T KOG0605|consen 216 ----LYLIMEYLPGGDMMTLLMRKD-TLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGL 287 (550)
T ss_pred ----eEEEEEecCCccHHHHHHhcC-cCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccc
Confidence 999999999999999998666 788888888999999999999999 999999999999999999999999999
Q ss_pred chhhhc---------------c---------C-----C--------------------cceeecCCCcchhhhccCCCCC
Q 004195 634 PLLAEA---------------R---------G-----K--------------------GSAEVSSPAKKTSVLARTEQDD 664 (769)
Q Consensus 634 a~~~~~---------------~---------~-----~--------------------~~~~~~~~~~~pe~~~~~~~~~ 664 (769)
+.-... . . . -...+++-|++||++.+..|+.
T Consensus 288 s~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~ 367 (550)
T KOG0605|consen 288 STGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGK 367 (550)
T ss_pred cchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCc
Confidence 832110 0 0 0 0123456678999999999999
Q ss_pred CCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCC
Q 004195 665 KSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRP 743 (769)
Q Consensus 665 ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 743 (769)
.+|.||+|||+|||+.|-|||..+... ..+.++.+.... .-|. .... ..++.+||.+|+. ||++|.
T Consensus 368 ~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l-------~fP~-~~~~----s~eA~DLI~rll~-d~~~RL 434 (550)
T KOG0605|consen 368 ECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETL-------KFPE-EVDL----SDEAKDLITRLLC-DPENRL 434 (550)
T ss_pred cccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhc-------cCCC-cCcc----cHHHHHHHHHHhc-CHHHhc
Confidence 999999999999999999999876543 344444332110 0011 0111 2458999999999 999996
Q ss_pred ---CHHHHHHHhHhhhh
Q 004195 744 ---SVEDTLWNLQFATQ 757 (769)
Q Consensus 744 ---s~~evl~~l~~~~~ 757 (769)
.++||-+|+||...
T Consensus 435 G~~G~~EIK~HPfF~~v 451 (550)
T KOG0605|consen 435 GSKGAEEIKKHPFFKGV 451 (550)
T ss_pred CcccHHHHhcCCccccC
Confidence 59999999999864
|
|
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-39 Score=345.90 Aligned_cols=250 Identities=18% Similarity=0.244 Sum_probs=202.0
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|+..+.||+|+||.||+|+.. +|+.||||.++... ....+.+.+|+.++++++||||+++++++.+.+
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~------ 91 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDEN------ 91 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCC------
Confidence 45788899999999999999976 68999999997542 223456889999999999999999999987643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 92 -~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~ 166 (329)
T PTZ00263 92 -RVYFLLEFVVGGELFTHLRKAG-RFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAK 166 (329)
T ss_pred -EEEEEEcCCCCChHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCce
Confidence 4899999999999999998554 688999999999999999999998 99999999999999999999999999987
Q ss_pred hhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccc
Q 004195 636 LAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAV 715 (769)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 715 (769)
...... ....++..|++||.+....++.++|||||||++|||+||++||.........+.+.. . ...+
T Consensus 167 ~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~---~--------~~~~ 234 (329)
T PTZ00263 167 KVPDRT-FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILA---G--------RLKF 234 (329)
T ss_pred EcCCCc-ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhc---C--------CcCC
Confidence 553322 223345567889999888899999999999999999999999976543222111110 0 0011
Q ss_pred cCCCCHHHHHHHHHHHHHcCcCCCCCCCC-----HHHHHHHhHhhh
Q 004195 716 MNECSDESLKRMMELCLRCLSNEPKDRPS-----VEDTLWNLQFAT 756 (769)
Q Consensus 716 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~l~~~~ 756 (769)
....+ ..+.+++.+||+.||++||+ ++|++.|+||..
T Consensus 235 p~~~~----~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~ 276 (329)
T PTZ00263 235 PNWFD----GRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHG 276 (329)
T ss_pred CCCCC----HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCC
Confidence 11122 34789999999999999996 799999999864
|
|
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-39 Score=346.62 Aligned_cols=258 Identities=20% Similarity=0.236 Sum_probs=204.1
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|+..+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|++++.+++||||+++++++.+.+
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~------ 74 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDE------ 74 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCC------
Confidence 36888999999999999999976 68999999997542 223456888999999999999999999987643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 75 -~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~ 149 (333)
T cd05600 75 -YLYLAMEYVPGGDFRTLLNNLG-VLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSK 149 (333)
T ss_pred -EEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCc
Confidence 4899999999999999997554 689999999999999999999998 99999999999999999999999999986
Q ss_pred hhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccc
Q 004195 636 LAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAV 715 (769)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 715 (769)
..... .....++..|++||.+.+..++.++|||||||++|||++|++||...........+.... . ....|..
T Consensus 150 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~---~---~~~~~~~ 222 (333)
T cd05600 150 GIVTY-ANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWK---E---TLQRPVY 222 (333)
T ss_pred ccccc-cCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhcc---c---cccCCCC
Confidence 55331 222334566788999888899999999999999999999999997654332211111000 0 0001110
Q ss_pred cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 716 MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 716 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.........++.+++.+|+..+|++||+++|+++|+|+..
T Consensus 223 -~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~ 262 (333)
T cd05600 223 -DDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKE 262 (333)
T ss_pred -CccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCC
Confidence 0000122344889999999999999999999999999874
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-40 Score=316.84 Aligned_cols=249 Identities=19% Similarity=0.282 Sum_probs=209.9
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC---hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS---PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~---~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|+....||.|+||.|..++.+ +|..+|+|++.+...-. .+...+|..+|+.+.||.++++++.|.+.+.
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~----- 118 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSN----- 118 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCe-----
Confidence 35777899999999999999976 68999999998664332 3456789999999999999999999987554
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
+|+||||.+||.|..++++.+ .+++...+-+|.||+.||+|||+. +|++||+||+|||+|.+|.+||+|||+|+
T Consensus 119 --lymvmeyv~GGElFS~Lrk~~-rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK 192 (355)
T KOG0616|consen 119 --LYMVMEYVPGGELFSYLRKSG-RFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAK 192 (355)
T ss_pred --EEEEEeccCCccHHHHHHhcC-CCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceE
Confidence 999999999999999999766 699999999999999999999999 99999999999999999999999999998
Q ss_pred hhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchh-HHHHhhhhhccccccccccccCcc
Q 004195 636 LAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVV-VLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
..... .-+.++++-|.+||.+....|+.++|.|||||++|||+.|.+||..... ....+++...+..
T Consensus 193 ~v~~r-T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~f----------- 260 (355)
T KOG0616|consen 193 RVSGR-TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKF----------- 260 (355)
T ss_pred EecCc-EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccC-----------
Confidence 77554 4455677788899999999999999999999999999999999976543 3344444333222
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCC-----CCHHHHHHHhHhhh
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDR-----PSVEDTLWNLQFAT 756 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~R-----Ps~~evl~~l~~~~ 756 (769)
|.-...++.+|+.+.++.|-.+| .-..+|-.|+||..
T Consensus 261 -----P~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~ 302 (355)
T KOG0616|consen 261 -----PSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKG 302 (355)
T ss_pred -----CcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCccccc
Confidence 22222338899999999999999 45779999999974
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-40 Score=335.71 Aligned_cols=251 Identities=19% Similarity=0.301 Sum_probs=206.6
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
.|...++||+|.||.||||... .++.||+|++..... ...+++++|+.++.+++++||.++||.|..+.. +
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~-------L 86 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTK-------L 86 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeeccc-------H
Confidence 3566789999999999999965 799999999987643 335789999999999999999999999987544 8
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
+++||||.+|++.+.++... .+++..+.-|.+++..||.|+|.+ +.+|||||+.|||+..+|.+|++|||.+-...
T Consensus 87 wiiMey~~gGsv~~lL~~~~-~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~ 162 (467)
T KOG0201|consen 87 WIIMEYCGGGSVLDLLKSGN-ILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLT 162 (467)
T ss_pred HHHHHHhcCcchhhhhccCC-CCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeee
Confidence 99999999999999998554 457888888999999999999999 99999999999999999999999999985443
Q ss_pred ccC--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCcccc
Q 004195 639 ARG--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM 716 (769)
Q Consensus 639 ~~~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 716 (769)
... ..+..++..||+||++....|+.|+||||+|++.+||++|.||+.+.....+..++ .+-..|.+.
T Consensus 163 ~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflI----------pk~~PP~L~ 232 (467)
T KOG0201|consen 163 NTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLI----------PKSAPPRLD 232 (467)
T ss_pred chhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEec----------cCCCCCccc
Confidence 322 24455677889999999889999999999999999999999999765432211111 111223333
Q ss_pred CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 717 NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 717 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
+.+ ...+.+++..|+.+||+.||++.++++|.+...
T Consensus 233 ~~~----S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~ 268 (467)
T KOG0201|consen 233 GDF----SPPFKEFVEACLDKNPEFRPSAKELLKHKFIKR 268 (467)
T ss_pred ccc----CHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHh
Confidence 333 344999999999999999999999999998654
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=324.31 Aligned_cols=247 Identities=20% Similarity=0.264 Sum_probs=206.1
Q ss_pred CCCCcCccccCCceeEEEEEe-CCCcEEEEEEccccCCCChh---HHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 481 CFDSSSFMCDASHGQIYKGKL-TDGTLVAIRSLKMSKKSSPH---MYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~~~~~---~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
+|+..+.+|+|.||.|-+|+. ..|+.||||.+++....+.+ .+.+||+||..++||||++++.+|...+.
T Consensus 54 RyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdK------ 127 (668)
T KOG0611|consen 54 RYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDK------ 127 (668)
T ss_pred HHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCce------
Confidence 466778999999999999995 57999999999877655443 57899999999999999999999987554
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
+.|||||..+|.|+|++.+.+ .|++.+...+++||..|+.|+|.+ +++|||||.+|||+|.++++||+|||++.+
T Consensus 128 -IvivMEYaS~GeLYDYiSer~-~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNl 202 (668)
T KOG0611|consen 128 -IVIVMEYASGGELYDYISERG-SLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNL 202 (668)
T ss_pred -EEEEEEecCCccHHHHHHHhc-cccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhh
Confidence 899999999999999999766 799999999999999999999999 999999999999999999999999999977
Q ss_pred hhccCCc-ceeecCCCcchhhhccCCC-CCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhh-hccccccccccccCc
Q 004195 637 AEARGKG-SAEVSSPAKKTSVLARTEQ-DDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQ-VNIGTDEARKSIVDP 713 (769)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~pe~~~~~~~-~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~ 713 (769)
+...... +.++..-|..||...+..| ++.+|.||+||+||.|+.|.-||++.+.......+. ..+ ..|
T Consensus 203 y~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaY---------rEP 273 (668)
T KOG0611|consen 203 YADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAY---------REP 273 (668)
T ss_pred hccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccc---------cCC
Confidence 7655543 3444555666888888888 789999999999999999999999876544333221 111 111
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
. .+. ...-||+.|+..+|++|.|+.+|..|-|..
T Consensus 274 ~----~PS----dA~gLIRwmLmVNP~RRATieDiAsHWWvN 307 (668)
T KOG0611|consen 274 E----TPS----DASGLIRWMLMVNPERRATIEDIASHWWVN 307 (668)
T ss_pred C----CCc----hHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence 1 122 266789999999999999999999999965
|
|
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=341.71 Aligned_cols=268 Identities=15% Similarity=0.227 Sum_probs=204.5
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|+..+.||+|+||.||+|+.. +|..+|+|.+..... ...+.+.+|++++++++||||++++++|.+.+ .
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-------~ 77 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-------E 77 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECC-------E
Confidence 67889999999999999999976 688999999875422 22356899999999999999999999998643 4
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.++||||+++|+|.+++...+ .+++.....++.++++||+|||+. .+|+||||||+||+++.++.+||+|||++...
T Consensus 78 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~ 154 (333)
T cd06650 78 ISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 154 (333)
T ss_pred EEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcCCCCEEEeeCCcchhh
Confidence 899999999999999998554 689999999999999999999974 16999999999999999999999999998655
Q ss_pred hccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccc-------ccc-
Q 004195 638 EARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEA-------RKS- 709 (769)
Q Consensus 638 ~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~-------~~~- 709 (769)
.........++..|++||.+.+..++.++|||||||++|||++|+.||..................... ...
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (333)
T cd06650 155 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPP 234 (333)
T ss_pred hhhccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCc
Confidence 333222333455788899988888999999999999999999999998754332222211100000000 000
Q ss_pred -----ccCccc-----------------cCCC-CHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 710 -----IVDPAV-----------------MNEC-SDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 710 -----~~d~~~-----------------~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
...|.. .... ......++.+++.+||+.||++|||++|+++|+|+...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 305 (333)
T cd06650 235 GRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 305 (333)
T ss_pred cchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence 000000 0000 00123458899999999999999999999999999754
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-38 Score=336.49 Aligned_cols=264 Identities=17% Similarity=0.232 Sum_probs=199.3
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC--CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK--SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
++|+..+.||+|+||.||+|+.+ +++.||||+++.... ...+.+.+|++++++++||||+++++++.+.+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------- 73 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRG------- 73 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCC-------
Confidence 46888999999999999999976 688999999975432 23456889999999999999999999987533
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++||||++++.+..+.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 74 ~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~ 149 (287)
T cd07848 74 KLYLVFEYVEKNMLELLEEMP-NGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARN 149 (287)
T ss_pred EEEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCccc
Confidence 489999999987776555433 3689999999999999999999998 999999999999999999999999999876
Q ss_pred hhccCC---cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccc-cc--------
Q 004195 637 AEARGK---GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIG-TD-------- 704 (769)
Q Consensus 637 ~~~~~~---~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~-~~-------- 704 (769)
...... ....++..|++||...+..++.++|||||||++|||++|++||...........+..... ..
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (287)
T cd07848 150 LSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFY 229 (287)
T ss_pred ccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhh
Confidence 532211 122344567889998888899999999999999999999999975432111111110000 00
Q ss_pred --cccccccCccccC------CCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 705 --EARKSIVDPAVMN------ECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 705 --~~~~~~~d~~~~~------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
........+.... .+....+..+.+++.+|++.||++|||++|+++|+||
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 230 SNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred ccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 0000000010000 0111234468999999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-40 Score=356.40 Aligned_cols=250 Identities=18% Similarity=0.286 Sum_probs=205.9
Q ss_pred CCcCccccCCceeEEEEEeC-C---CcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 483 DSSSFMCDASHGQIYKGKLT-D---GTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 483 ~~~~~iG~G~~g~Vy~~~~~-~---g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
.++++||.|.||.||+|+++ . ...||||.++.... ....+|..|..||.+..||||++|-|+......
T Consensus 632 ~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~P------- 704 (996)
T KOG0196|consen 632 KIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKP------- 704 (996)
T ss_pred EEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCce-------
Confidence 46899999999999999976 2 35799999997643 335689999999999999999999999875433
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
++||.|||+||+|+.+|+.+...+++.+...+.++||.|+.||-+. ++|||||..+|||++.+..+||+|||+++..
T Consensus 705 vMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGLSRvl 781 (996)
T KOG0196|consen 705 VMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVL 781 (996)
T ss_pred eEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccccceeec
Confidence 8999999999999999997666799999999999999999999999 9999999999999999999999999999987
Q ss_pred hccCCccee-----ecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhcccccccccccc
Q 004195 638 EARGKGSAE-----VSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIV 711 (769)
Q Consensus 638 ~~~~~~~~~-----~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (769)
++....... ....|.+||.+...++|.+||||||||||||.++ |..|+-+.....+-+-+...+..
T Consensus 782 edd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRL-------- 853 (996)
T KOG0196|consen 782 EDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRL-------- 853 (996)
T ss_pred ccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCC--------
Confidence 654422211 1234567999999999999999999999999877 88887765544443333322221
Q ss_pred CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 712 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
..|.+++..+.+|++.||++|-.+||++.+|+.++...-
T Consensus 854 ------PpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklI 892 (996)
T KOG0196|consen 854 ------PPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLI 892 (996)
T ss_pred ------CCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHh
Confidence 123344455999999999999999999999999998543
|
|
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-39 Score=345.23 Aligned_cols=272 Identities=22% Similarity=0.293 Sum_probs=200.0
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC--CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK--KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
+|+..+.||+|+||.||+|+.. +|+.||||++.... ......+.+|++++++++||||+++++++...... ....
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~--~~~~ 78 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRR--EFKD 78 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCC--CCce
Confidence 4777899999999999999965 68999999987432 22335688999999999999999999998653321 1235
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.++|||||+ ++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 79 ~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~ 153 (338)
T cd07859 79 IYVVFELME-SDLHQVIKAND-DLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARVA 153 (338)
T ss_pred EEEEEecCC-CCHHHHHHhcc-cCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCcccccc
Confidence 799999995 68999887554 689999999999999999999999 9999999999999999999999999998654
Q ss_pred hccCC-----cceeecCCCcchhhhcc--CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccc--cccc
Q 004195 638 EARGK-----GSAEVSSPAKKTSVLAR--TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTD--EARK 708 (769)
Q Consensus 638 ~~~~~-----~~~~~~~~~~~pe~~~~--~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~--~~~~ 708 (769)
..... ....++..|++||...+ ..++.++|||||||++|||+||++||...........+....+.. ....
T Consensus 154 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (338)
T cd07859 154 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETIS 233 (338)
T ss_pred ccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence 22211 11234456778998755 578999999999999999999999997543221111111100000 0000
Q ss_pred cc-----------cCccccCC---CCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 709 SI-----------VDPAVMNE---CSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 709 ~~-----------~d~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
.+ ..+..... ..+.....+.+++.+||+.||++|||++|+++|+||.....
T Consensus 234 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~ 298 (338)
T cd07859 234 RVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAK 298 (338)
T ss_pred HhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCc
Confidence 00 00000000 00012234789999999999999999999999999975433
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=319.57 Aligned_cols=272 Identities=18% Similarity=0.286 Sum_probs=207.6
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC--CChhHHHHHHHHHhhccCCc-eeeEeeeeeccCCCCCCcc
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK--SSPHMYTYHIELISKLRHSN-LVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~n-Iv~l~~~~~~~~~~~~~~~ 556 (769)
.|...+.||+|+||+||+|+.+ +|+.||+|+++.... .-.....+|+.++++++|+| ||++++++.+... .....
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~-~~~~~ 90 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNN-HRGIG 90 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccc-ccccc
Confidence 3555678999999999999965 799999999986643 24567899999999999999 9999999987553 12234
Q ss_pred eEEEEEeccCCCchhhhhcCCC---CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 557 IIYLIFEYAPNETLRSFISGPG---YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~---~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
..++||||+. -+|.+++.... ..++-..++.++.|+++||+|||++ +|+||||||+|||++++|.+||+|||+
T Consensus 91 ~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFGl 166 (323)
T KOG0594|consen 91 KLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFGL 166 (323)
T ss_pred eEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccch
Confidence 5899999996 59999998443 3577788999999999999999999 999999999999999999999999999
Q ss_pred chhhhcc--CCcceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccc--cccccc
Q 004195 634 PLLAEAR--GKGSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIG--TDEARK 708 (769)
Q Consensus 634 a~~~~~~--~~~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~--~~~~~~ 708 (769)
|+...-. ......++.-|++||++.+. .|++..||||+|||+.||+++++.|.+.........+....+ .++.|.
T Consensus 167 Ara~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp 246 (323)
T KOG0594|consen 167 ARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWP 246 (323)
T ss_pred HHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCC
Confidence 9765422 23344445557889988776 799999999999999999999998877654322222222222 223333
Q ss_pred ccc---C--ccccCC-----CCH---HHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 709 SIV---D--PAVMNE-----CSD---ESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 709 ~~~---d--~~~~~~-----~~~---~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.+. + +..... ... .......+++.+|++.+|.+|.|++.++.|++|...
T Consensus 247 ~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 247 GVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL 308 (323)
T ss_pred CccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence 221 1 111110 011 111368899999999999999999999999998754
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-39 Score=344.63 Aligned_cols=251 Identities=19% Similarity=0.294 Sum_probs=202.8
Q ss_pred CcCccccCCceeEEEEEeC--CC--cE-EEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 484 SSSFMCDASHGQIYKGKLT--DG--TL-VAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 484 ~~~~iG~G~~g~Vy~~~~~--~g--~~-vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
..+.||+|+||.||+|++. ++ .. ||||..+... .....+|.+|.++|++++|||||++||++.....
T Consensus 161 l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~P----- 235 (474)
T KOG0194|consen 161 LGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEP----- 235 (474)
T ss_pred ccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCc-----
Confidence 3489999999999999965 33 23 8999998532 3335689999999999999999999999987443
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
+++|||+|+||+|.++|++.+..++..++.+++.+.|+||+|||+. ++|||||-.+|+|++.++.+||+|||+++
T Consensus 236 --l~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDFGLs~ 310 (474)
T KOG0194|consen 236 --LMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDFGLSR 310 (474)
T ss_pred --cEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCcccccc
Confidence 8999999999999999997766799999999999999999999999 99999999999999999999999999986
Q ss_pred hhhccC--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhh-hhcccccccccccc
Q 004195 636 LAEARG--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLL-QVNIGTDEARKSIV 711 (769)
Q Consensus 636 ~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 711 (769)
....-. .........|.+||.+....|++++|||||||++||+++ |..|+.+.....+...+ ...+.
T Consensus 311 ~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r--------- 381 (474)
T KOG0194|consen 311 AGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYR--------- 381 (474)
T ss_pred CCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCcc---------
Confidence 553111 111223456788999999999999999999999999999 78898876655554443 21111
Q ss_pred CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 712 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
-..+...+..+..++.+||..+|++||+|.++.+.+......
T Consensus 382 -----~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~ 423 (474)
T KOG0194|consen 382 -----MPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKK 423 (474)
T ss_pred -----CCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhc
Confidence 111222334477788899999999999999999999876543
|
|
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=338.80 Aligned_cols=243 Identities=14% Similarity=0.194 Sum_probs=194.9
Q ss_pred cccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEEEe
Q 004195 488 MCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFE 563 (769)
Q Consensus 488 iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV~E 563 (769)
||+|+||.||+|+.. +++.||+|.++... ......+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-------~~~lv~e 73 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPE-------KLYLVLA 73 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCC-------eEEEEEc
Confidence 799999999999976 68899999997532 223356788999999999999999999887533 4899999
Q ss_pred ccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhccC--
Q 004195 564 YAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARG-- 641 (769)
Q Consensus 564 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~~-- 641 (769)
|+++|+|.+++...+ .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 74 ~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 149 (312)
T cd05585 74 FINGGELFHHLQREG-RFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDK 149 (312)
T ss_pred CCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCc
Confidence 999999999997654 689999999999999999999998 99999999999999999999999999986532221
Q ss_pred CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccCCCCH
Q 004195 642 KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSD 721 (769)
Q Consensus 642 ~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 721 (769)
.....++..|++||.+.+..++.++|||||||++|||+||++||............. .. ...+....+
T Consensus 150 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~---~~--------~~~~~~~~~- 217 (312)
T cd05585 150 TNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKIL---QE--------PLRFPDGFD- 217 (312)
T ss_pred cccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHH---cC--------CCCCCCcCC-
Confidence 122334567888999988889999999999999999999999997644322211110 00 011112223
Q ss_pred HHHHHHHHHHHHcCcCCCCCCC---CHHHHHHHhHhhh
Q 004195 722 ESLKRMMELCLRCLSNEPKDRP---SVEDTLWNLQFAT 756 (769)
Q Consensus 722 ~~~~~l~~li~~cl~~dP~~RP---s~~evl~~l~~~~ 756 (769)
..+.+++.+||+.||++|| ++.|++.|+|+..
T Consensus 218 ---~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~ 252 (312)
T cd05585 218 ---RDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQ 252 (312)
T ss_pred ---HHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCC
Confidence 3488999999999999997 5899999999875
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-38 Score=339.79 Aligned_cols=245 Identities=17% Similarity=0.213 Sum_probs=196.3
Q ss_pred CccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEE
Q 004195 486 SFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLI 561 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV 561 (769)
+.||+|+||.||+++.. +|+.||||++.... ......+.+|+++++.++||||+++++++.+.+ ..++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-------~~~lv 73 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKD-------RLCFV 73 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCC-------EEEEE
Confidence 46899999999999965 68999999997542 223356788999999999999999999887643 48999
Q ss_pred EeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhccC
Q 004195 562 FEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARG 641 (769)
Q Consensus 562 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~~ 641 (769)
|||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 74 ~Ey~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~ 149 (328)
T cd05593 74 MEYVNGGELFFHLSRER-VFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA 149 (328)
T ss_pred EeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCcc
Confidence 99999999999887554 689999999999999999999998 99999999999999999999999999986432211
Q ss_pred --CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccCCC
Q 004195 642 --KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNEC 719 (769)
Q Consensus 642 --~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 719 (769)
.....++..|++||.+.+..++.++|||||||++|||+||+.||...........+. .. +..+....
T Consensus 150 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~---~~--------~~~~p~~~ 218 (328)
T cd05593 150 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL---ME--------DIKFPRTL 218 (328)
T ss_pred cccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhc---cC--------CccCCCCC
Confidence 122234567788999888889999999999999999999999997544322221111 00 11111223
Q ss_pred CHHHHHHHHHHHHHcCcCCCCCCC-----CHHHHHHHhHhhh
Q 004195 720 SDESLKRMMELCLRCLSNEPKDRP-----SVEDTLWNLQFAT 756 (769)
Q Consensus 720 ~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~~~~ 756 (769)
+ .++.+++.+|++.||++|| ++.|+++|+||..
T Consensus 219 ~----~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~ 256 (328)
T cd05593 219 S----ADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTG 256 (328)
T ss_pred C----HHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCC
Confidence 3 3488999999999999997 8999999999854
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-39 Score=308.03 Aligned_cols=260 Identities=15% Similarity=0.250 Sum_probs=209.5
Q ss_pred HHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC--CC------hhHHHHHHHHHhhc-cCCceeeEeeee
Q 004195 476 KEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK--SS------PHMYTYHIELISKL-RHSNLVSALGHC 545 (769)
Q Consensus 476 ~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~--~~------~~~~~~Ei~~l~~l-~H~nIv~l~~~~ 545 (769)
...-+.|...+.+|+|..++|-++..+ +|..+|+|++..... .. .+...+|+.||+++ .||+|+++.++|
T Consensus 13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y 92 (411)
T KOG0599|consen 13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY 92 (411)
T ss_pred hhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec
Confidence 344556888899999999999999865 788999999964321 11 13456799999998 599999999999
Q ss_pred eccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCce
Q 004195 546 LDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH 625 (769)
Q Consensus 546 ~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~ 625 (769)
.++.. +++|+|.|+.|.|+|++...- .+++....+|++|+.+|++|||.. .|||||+||+|||+|++.+
T Consensus 93 es~sF-------~FlVFdl~prGELFDyLts~V-tlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~ 161 (411)
T KOG0599|consen 93 ESDAF-------VFLVFDLMPRGELFDYLTSKV-TLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMN 161 (411)
T ss_pred cCcch-------hhhhhhhcccchHHHHhhhhe-eecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccc
Confidence 87665 899999999999999998543 789999999999999999999999 9999999999999999999
Q ss_pred eeecCCCCchhhhccCC-cceeecCCCcchhhhc------cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHh-hh
Q 004195 626 VKINSYNLPLLAEARGK-GSAEVSSPAKKTSVLA------RTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKD-LL 697 (769)
Q Consensus 626 ~kl~DFGla~~~~~~~~-~~~~~~~~~~~pe~~~------~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~-~~ 697 (769)
+||+|||+|...+.+.. ...+++++|.+||.+. ...|+..+|+||.|||+|.|+.|.+||.......... ++
T Consensus 162 i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~Im 241 (411)
T KOG0599|consen 162 IKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIM 241 (411)
T ss_pred eEEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHH
Confidence 99999999977765543 4457778888888753 3468899999999999999999999997544332222 22
Q ss_pred hhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 698 QVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 698 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
+..+.. ......+....+.+||.+|++.||.+|.|++|+++|+||+...
T Consensus 242 eGkyqF------------~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~~ 290 (411)
T KOG0599|consen 242 EGKYQF------------RSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQIA 290 (411)
T ss_pred hccccc------------CCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHHHH
Confidence 222221 1122233445589999999999999999999999999997543
|
|
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-38 Score=332.93 Aligned_cols=269 Identities=18% Similarity=0.309 Sum_probs=198.5
Q ss_pred cCCCCcCccccCCceeEEEEEeC--CCcEEEEEEccccCC--CChhHHHHHHHHHhhc---cCCceeeEeeeeeccCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT--DGTLVAIRSLKMSKK--SSPHMYTYHIELISKL---RHSNLVSALGHCLDFSLDD 552 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~--~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l---~H~nIv~l~~~~~~~~~~~ 552 (769)
++|+..+.||+|+||.||+|+.. +|+.||||+++.... .....+.+|+.+++++ +||||++++++|.....+
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~- 79 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD- 79 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC-
Confidence 36888899999999999999863 478899999875432 2234577788887766 699999999998643221
Q ss_pred CCcceEEEEEeccCCCchhhhhcC-CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCC
Q 004195 553 PSISIIYLIFEYAPNETLRSFISG-PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSY 631 (769)
Q Consensus 553 ~~~~~~~lV~Ey~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DF 631 (769)
.....++||||++ ++|.+++.. ....+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 80 -~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Df 154 (290)
T cd07862 80 -RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADF 154 (290)
T ss_pred -CCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEccc
Confidence 2345899999996 689998873 234589999999999999999999998 9999999999999999999999999
Q ss_pred CCchhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchh-HHHHhhhhhc-cccccccc
Q 004195 632 NLPLLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVV-VLVKDLLQVN-IGTDEARK 708 (769)
Q Consensus 632 Gla~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~-~~~~~~~~~~-~~~~~~~~ 708 (769)
|+++....... ....++..|++||.+....++.++|||||||++|||++|++||..... +....+.... ....+.+.
T Consensus 155 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~ 234 (290)
T cd07862 155 GLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 234 (290)
T ss_pred cceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhch
Confidence 99865543221 223345567889998888899999999999999999999999976432 2222222111 01111111
Q ss_pred c-------ccCccc---cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 709 S-------IVDPAV---MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 709 ~-------~~d~~~---~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
. .+.+.. .....+.....+.+++.+|++.||++|||+.|+++|+||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 235 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred hhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 0 000000 000111223457899999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=343.55 Aligned_cols=250 Identities=18% Similarity=0.218 Sum_probs=200.9
Q ss_pred cCCCCcCccccCCceeEEEEEeCC--CcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTD--GTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~--g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
++|+..+.||+|+||.||+|+.+. +..||+|++.... ....+.+.+|+++++.++|||||++++++.+..
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~----- 104 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDES----- 104 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCC-----
Confidence 458888999999999999998643 4689999986532 223456889999999999999999999997643
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
..++||||+++|+|.+++.+.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 105 --~~~lv~Ey~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a 178 (340)
T PTZ00426 105 --YLYLVLEFVIGGEFFTFLRRNK-RFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFA 178 (340)
T ss_pred --EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCC
Confidence 4899999999999999998654 689999999999999999999998 9999999999999999999999999999
Q ss_pred hhhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCcc
Q 004195 635 LLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
+...... ....++..|++||.+.+..++.++|||||||++|||+||++||...........+... . ..
T Consensus 179 ~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~---~--------~~ 246 (340)
T PTZ00426 179 KVVDTRT-YTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEG---I--------IY 246 (340)
T ss_pred eecCCCc-ceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcC---C--------CC
Confidence 7653322 2233455688899988888999999999999999999999999765433221111100 0 00
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCC-----CHHHHHHHhHhhh
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRP-----SVEDTLWNLQFAT 756 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~~~~ 756 (769)
+....+ ..+.+++.+|++.||++|+ +++|+++|+||..
T Consensus 247 ~p~~~~----~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~ 289 (340)
T PTZ00426 247 FPKFLD----NNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGN 289 (340)
T ss_pred CCCCCC----HHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 111222 3478999999999999995 8999999999863
|
|
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-38 Score=336.36 Aligned_cols=269 Identities=19% Similarity=0.297 Sum_probs=200.3
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
.++|+..+.||+|+||.||+|+.. +|+.||||+++.... .....+.+|+.++++++||||+++++++.+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------- 76 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKE------- 76 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCC-------
Confidence 467889999999999999999976 789999999975432 22346788999999999999999999987643
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++||||++ ++|.+++......+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 77 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~ 152 (303)
T cd07869 77 TLTLVFEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARA 152 (303)
T ss_pred eEEEEEECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCccee
Confidence 4899999996 688888875555789999999999999999999998 999999999999999999999999999864
Q ss_pred hhccC--CcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchh--HHHHhhhhh-ccccccccccc
Q 004195 637 AEARG--KGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVV--VLVKDLLQV-NIGTDEARKSI 710 (769)
Q Consensus 637 ~~~~~--~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~--~~~~~~~~~-~~~~~~~~~~~ 710 (769)
..... .....++..|++||.+.+ ..++.++||||+||++|||+||++||.+... ......... .......+...
T Consensus 153 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (303)
T cd07869 153 KSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGV 232 (303)
T ss_pred ccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccch
Confidence 32211 122233456788998754 4578999999999999999999999975321 111111110 00000000000
Q ss_pred -----cCccccCCC-CH---------HHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 711 -----VDPAVMNEC-SD---------ESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 711 -----~d~~~~~~~-~~---------~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
.++...... +. .....+.+++.+|++.||++|||+.|+++|+||....
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~ 295 (303)
T cd07869 233 HSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLP 295 (303)
T ss_pred hhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCC
Confidence 011000000 00 0123578999999999999999999999999997543
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-40 Score=310.83 Aligned_cols=256 Identities=16% Similarity=0.218 Sum_probs=205.7
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc--CCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS--KKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++.|+..+.||+|.|+.||++... +|+.+|+|++... ...+.+++.+|+.|.+.++|||||++.+.+.+..
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~------ 83 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEES------ 83 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccc------
Confidence 456777789999999999999865 7999999998754 2345688999999999999999999998876533
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC---CceeeecCCC
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE---NFHVKINSYN 632 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---~~~~kl~DFG 632 (769)
..|+|+|+|.|++|..-+-.. ...++...-.+++||++||.|+|.+ +|||||+||+|+++.. .--+|++|||
T Consensus 84 -~~ylvFe~m~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FG 158 (355)
T KOG0033|consen 84 -FHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFG 158 (355)
T ss_pred -eeEEEEecccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccc
Confidence 479999999999998766433 2567788888999999999999999 9999999999999943 3458999999
Q ss_pred CchhhhccC-CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCC-chhHHHHhhhhhccccccccccc
Q 004195 633 LPLLAEARG-KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSE-NVVVLVKDLLQVNIGTDEARKSI 710 (769)
Q Consensus 633 la~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~ 710 (769)
+|.....+. .....+++.+++||+..+.+|+..+|||+.|||||-|+.|.+||.+ ......+.+.+..+..
T Consensus 159 vAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~------- 231 (355)
T KOG0033|consen 159 LAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDY------- 231 (355)
T ss_pred eEEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCC-------
Confidence 997665322 2334566788999999999999999999999999999999999987 4444455544433322
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 711 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
++..+.... ++..+|+++|+..||++|.|+.|+++|+|....
T Consensus 232 -~~~~w~~is----~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r 273 (355)
T KOG0033|consen 232 -PSPEWDTVT----PEAKSLIRRMLTVNPKKRITADEALKHPWICNR 273 (355)
T ss_pred -CCcccCcCC----HHHHHHHHHHhccChhhhccHHHHhCCchhcch
Confidence 222222233 348999999999999999999999999997543
|
|
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=340.01 Aligned_cols=245 Identities=17% Similarity=0.230 Sum_probs=196.0
Q ss_pred CccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEE
Q 004195 486 SFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLI 561 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV 561 (769)
+.||+|+||.||+++.. +|+.||+|.++... ......+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~-------~~~lv 73 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD-------RLCFV 73 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCC-------EEEEE
Confidence 46999999999999965 78999999997542 222346778999999999999999999987643 48999
Q ss_pred EeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhccC
Q 004195 562 FEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARG 641 (769)
Q Consensus 562 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~~ 641 (769)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 74 ~E~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 149 (323)
T cd05595 74 MEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 149 (323)
T ss_pred EeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCC
Confidence 99999999999887554 689999999999999999999998 99999999999999999999999999986432111
Q ss_pred --CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccCCC
Q 004195 642 --KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNEC 719 (769)
Q Consensus 642 --~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 719 (769)
.....++..|++||.+.+..++.++|||||||++|||++|+.||...........+.. . +..+...+
T Consensus 150 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~---~--------~~~~p~~~ 218 (323)
T cd05595 150 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM---E--------EIRFPRTL 218 (323)
T ss_pred CccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhc---C--------CCCCCCCC
Confidence 1122345567889998888899999999999999999999999875443322221110 0 01111223
Q ss_pred CHHHHHHHHHHHHHcCcCCCCCCC-----CHHHHHHHhHhhh
Q 004195 720 SDESLKRMMELCLRCLSNEPKDRP-----SVEDTLWNLQFAT 756 (769)
Q Consensus 720 ~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~~~~ 756 (769)
++ .+.+++.+||+.||++|| ++.++++|.||..
T Consensus 219 ~~----~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~ 256 (323)
T cd05595 219 SP----EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 256 (323)
T ss_pred CH----HHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCC
Confidence 33 488999999999999998 9999999999864
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=362.66 Aligned_cols=249 Identities=25% Similarity=0.355 Sum_probs=200.2
Q ss_pred CCcCccccCCceeEEEEEeC--CCc----EEEEEEccccC-CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 483 DSSSFMCDASHGQIYKGKLT--DGT----LVAIRSLKMSK-KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 483 ~~~~~iG~G~~g~Vy~~~~~--~g~----~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
+....||+|.||.||+|.+. +|. .||||.++... .+...+|.+|..+|++++|||||+++|+|.+...
T Consensus 695 ~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~----- 769 (1025)
T KOG1095|consen 695 TLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGP----- 769 (1025)
T ss_pred EeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCC-----
Confidence 34688999999999999965 343 49999998653 3445789999999999999999999999997433
Q ss_pred ceEEEEEeccCCCchhhhhcCC------CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeec
Q 004195 556 SIIYLIFEYAPNETLRSFISGP------GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKIN 629 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~ 629 (769)
.+|++|||++|||..+|++. ...++..+.+.++.|||+|+.||+++ ++|||||..+|+|+++...+||+
T Consensus 770 --~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIa 844 (1025)
T KOG1095|consen 770 --PLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIA 844 (1025)
T ss_pred --cEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEc
Confidence 79999999999999999865 56799999999999999999999999 99999999999999999999999
Q ss_pred CCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccc
Q 004195 630 SYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTD 704 (769)
Q Consensus 630 DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 704 (769)
|||+|+.+..... ....-.-.|++||.+....+|.|+|||||||++||++| |..||.......+...+...
T Consensus 845 DFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~g---- 920 (1025)
T KOG1095|consen 845 DFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEG---- 920 (1025)
T ss_pred ccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhC----
Confidence 9999985433222 11112246789999999999999999999999999999 78888765443333211110
Q ss_pred cccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 705 EARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 705 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
. .++ .+..++..+.++|..||+.+|++||++.++++.+..+
T Consensus 921 -g---RL~------~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i 961 (1025)
T KOG1095|consen 921 -G---RLD------PPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAI 961 (1025)
T ss_pred -C---ccC------CCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhh
Confidence 0 111 1223333488999999999999999999999976644
|
|
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-38 Score=332.83 Aligned_cols=257 Identities=21% Similarity=0.304 Sum_probs=191.7
Q ss_pred cCCCCcCccccCCceeEEEEEeCC-----------------CcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTD-----------------GTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSA 541 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~-----------------g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l 541 (769)
++|...+.||+|+||.||+|.+++ +..||+|.+..... ....++.+|++++.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 467778999999999999997532 34799999875422 223578999999999999999999
Q ss_pred eeeeeccCCCCCCcceEEEEEeccCCCchhhhhcCC------------------CCCCCHHHHHHHHHHHHHHhcccccC
Q 004195 542 LGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGP------------------GYKLTWVQRIAAAIAIVKGVQFLHTG 603 (769)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~------------------~~~l~~~~~~~i~~~ia~gL~yLH~~ 603 (769)
++++.+.+. .++||||+++|+|.+++... ...++|..+.+++.|+++||+|||+.
T Consensus 85 ~~~~~~~~~-------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~ 157 (304)
T cd05096 85 LGVCVDEDP-------LCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL 157 (304)
T ss_pred EEEEecCCc-------eEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC
Confidence 999976433 79999999999999988522 12478899999999999999999998
Q ss_pred CCCCccccCccccceeeCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHH
Q 004195 604 IVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEII 679 (769)
Q Consensus 604 ~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ell 679 (769)
+|+||||||+|||+++++.+||+|||+++....... ........|++||......++.++|||||||++|||+
T Consensus 158 ---~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~ 234 (304)
T cd05096 158 ---NFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEIL 234 (304)
T ss_pred ---CccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHH
Confidence 999999999999999999999999999865432221 1111234578899888888999999999999999999
Q ss_pred h--CCCCCCCchhHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 680 V--GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 680 t--G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
+ +..|+..................... . ........++ ..+.+++.+||+.||++|||++||.+.+.
T Consensus 235 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~----~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 235 MLCKEQPYGELTDEQVIENAGEFFRDQGR--Q-VYLFRPPPCP----QGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred HccCCCCCCcCCHHHHHHHHHHHhhhccc--c-ccccCCCCCC----HHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 7 45666543322221111110000000 0 0011111223 34899999999999999999999987663
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-38 Score=323.79 Aligned_cols=247 Identities=18% Similarity=0.304 Sum_probs=196.1
Q ss_pred CCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEE
Q 004195 481 CFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYL 560 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~l 560 (769)
+|+..+.||+|+||.||+|+.+++..+|+|.+... ....+++.+|++++++++||||++++++|.+.+. .++
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-------~~i 76 (256)
T cd05114 5 ELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKP-------LYI 76 (256)
T ss_pred HcEEeeEecCCcCceEEEEEeccCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCC-------EEE
Confidence 47778899999999999999888889999998743 3345679999999999999999999999876433 899
Q ss_pred EEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhcc
Q 004195 561 IFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEAR 640 (769)
Q Consensus 561 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~ 640 (769)
||||+++|+|.++++.....++|..+..++.|++.||+|||+. +|+||||||+||++++++.+|++|||.++.....
T Consensus 77 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~ 153 (256)
T cd05114 77 VTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDD 153 (256)
T ss_pred EEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCC
Confidence 9999999999999975444689999999999999999999998 9999999999999999999999999998654322
Q ss_pred CCcc---eeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCcccc
Q 004195 641 GKGS---AEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM 716 (769)
Q Consensus 641 ~~~~---~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 716 (769)
.... ......|.+||......++.++||||||+++|||++ |++||...........+.... ....|.
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~-------~~~~~~-- 224 (256)
T cd05114 154 EYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGF-------RLYRPK-- 224 (256)
T ss_pred ceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC-------CCCCCC--
Confidence 1111 111234678888877889999999999999999999 898987544322222111100 001111
Q ss_pred CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHh
Q 004195 717 NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNL 752 (769)
Q Consensus 717 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 752 (769)
.. ...+.+++.+||+.+|++||+++|+++.+
T Consensus 225 -~~----~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 225 -LA----SMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred -CC----CHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 11 23488999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-38 Score=344.32 Aligned_cols=251 Identities=18% Similarity=0.245 Sum_probs=194.1
Q ss_pred cCCCCcCccccCCceeEEEEEe------CCCcEEEEEEccccCC-CChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKL------TDGTLVAIRSLKMSKK-SSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLD 551 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~ 551 (769)
++|+..+.||+|+||.||+|+. .++..||||+++.... ...+.+.+|+++++.+ +|||||+++++|.+.+.
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~- 113 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP- 113 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc-
Confidence 3577789999999999999973 2466899999975432 2345688999999999 89999999999976443
Q ss_pred CCCcceEEEEEeccCCCchhhhhcCCC-----------------------------------------------------
Q 004195 552 DPSISIIYLIFEYAPNETLRSFISGPG----------------------------------------------------- 578 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~----------------------------------------------------- 578 (769)
.++|||||++|+|.++++...
T Consensus 114 ------~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 187 (375)
T cd05104 114 ------TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRR 187 (375)
T ss_pred ------ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccc
Confidence 799999999999999886321
Q ss_pred ---------------------CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 579 ---------------------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 579 ---------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
..++|..+.+++.||++||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 264 (375)
T cd05104 188 SVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDI 264 (375)
T ss_pred ccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceec
Confidence 2478999999999999999999998 9999999999999999999999999998654
Q ss_pred hccCCc----ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhH-HHHhhhhhcccccccccccc
Q 004195 638 EARGKG----SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVV-LVKDLLQVNIGTDEARKSIV 711 (769)
Q Consensus 638 ~~~~~~----~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 711 (769)
...... .......|++||...+..++.++|||||||++|||++ |..||...... .....+....
T Consensus 265 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~---------- 334 (375)
T cd05104 265 RNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGY---------- 334 (375)
T ss_pred cCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCc----------
Confidence 332211 1111234788999888889999999999999999998 88888653221 1112111110
Q ss_pred CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 712 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
.+...... ..++.+++.+||+.||++||++.||++.++.
T Consensus 335 ~~~~~~~~----~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 335 RMLSPECA----PSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred cCCCCCCC----CHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 00001112 2348899999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=301.07 Aligned_cols=261 Identities=15% Similarity=0.199 Sum_probs=205.1
Q ss_pred cCCCCcCccccCCceeEEEEE-eCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 480 DCFDSSSFMCDASHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
++|.+.+.+|+|||+.||.++ ..++..+|+|++......+.+...+|++..++++|||++++++++.....| ...+.
T Consensus 21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D--~~~~~ 98 (302)
T KOG2345|consen 21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKD--GKHEA 98 (302)
T ss_pred ceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhcc--CceeE
Confidence 467888999999999999999 568999999999988777788899999999999999999999999765544 24568
Q ss_pred EEEEeccCCCchhhhhc---CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 559 YLIFEYAPNETLRSFIS---GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
||+++|+..|+|.+.+. ..+..+++.+.+.|+.+|++||++||+. .|+++||||||.|||+.+.+.+++.|||.+.
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~ 177 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSAT 177 (302)
T ss_pred EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCcc
Confidence 99999999999999986 3445799999999999999999999996 5579999999999999999999999999985
Q ss_pred hhhccC-----------CcceeecCCCcchhhhcc---CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcc
Q 004195 636 LAEARG-----------KGSAEVSSPAKKTSVLAR---TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNI 701 (769)
Q Consensus 636 ~~~~~~-----------~~~~~~~~~~~~pe~~~~---~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~ 701 (769)
...-.- ......+.+|++||.+.- ...++++|||||||+||+|+.|..||+..... .
T Consensus 178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~-------G-- 248 (302)
T KOG2345|consen 178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQ-------G-- 248 (302)
T ss_pred ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhc-------C--
Confidence 442111 122234568889997653 34689999999999999999999999642210 0
Q ss_pred ccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 702 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
..-.-.+..+.+.-......++.+.+++..|++.||.+||++.+++.++..
T Consensus 249 --gSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~ 299 (302)
T KOG2345|consen 249 --GSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDD 299 (302)
T ss_pred --CeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHh
Confidence 000001111111000011134458999999999999999999999988763
|
|
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-38 Score=334.48 Aligned_cols=253 Identities=18% Similarity=0.292 Sum_probs=199.9
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCc----EEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGT----LVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~----~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
.+|+..+.||+|+||.||+|++. +|+ .||||.++.... ...+++.+|+.+++.++||||++++|+|....
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~---- 82 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST---- 82 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCC----
Confidence 35888999999999999999864 344 489999875422 23467889999999999999999999997532
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
.++|+||+++|+|.+++......+++..+.+++.||++||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 83 ----~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~ 155 (316)
T cd05108 83 ----VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGL 155 (316)
T ss_pred ----ceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEccccc
Confidence 5899999999999999986655789999999999999999999998 999999999999999999999999999
Q ss_pred chhhhccCCcc----eeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccc
Q 004195 634 PLLAEARGKGS----AEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARK 708 (769)
Q Consensus 634 a~~~~~~~~~~----~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (769)
++......... ......|++||......++.++|||||||++|||+| |++|+.................
T Consensus 156 a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~------ 229 (316)
T cd05108 156 AKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER------ 229 (316)
T ss_pred cccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCCCC------
Confidence 97654322211 111234778998888889999999999999999998 9999876543333332221100
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
+.....++ ..+.+++.+||+.+|++||++.+++.++.....
T Consensus 230 ----~~~~~~~~----~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~ 270 (316)
T cd05108 230 ----LPQPPICT----IDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 270 (316)
T ss_pred ----CCCCCCCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence 01111223 347899999999999999999999999876543
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-38 Score=343.04 Aligned_cols=252 Identities=15% Similarity=0.199 Sum_probs=191.3
Q ss_pred CCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC-ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 482 FDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS-SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
|+..+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++|+||+++++++.+.. ..+
T Consensus 76 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-------~~~ 148 (353)
T PLN00034 76 LERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNG-------EIQ 148 (353)
T ss_pred HhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCC-------eEE
Confidence 445688999999999999975 6899999998644222 2356889999999999999999999987533 389
Q ss_pred EEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhc
Q 004195 560 LIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEA 639 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~ 639 (769)
+||||+++|+|.+.. ..++..+..++.||++||+|||+. +|+||||||+|||+++++.+||+|||+++....
T Consensus 149 lv~e~~~~~~L~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~ 220 (353)
T PLN00034 149 VLLEFMDGGSLEGTH-----IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQ 220 (353)
T ss_pred EEEecCCCCcccccc-----cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceeccc
Confidence 999999999987542 356778889999999999999998 999999999999999999999999999876543
Q ss_pred cCC--cceeecCCCcchhhhcc-----CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccC
Q 004195 640 RGK--GSAEVSSPAKKTSVLAR-----TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVD 712 (769)
Q Consensus 640 ~~~--~~~~~~~~~~~pe~~~~-----~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 712 (769)
... ....++..|++||.+.. ...+.++|||||||++|||++|+.||.................. ..
T Consensus 221 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~-------~~ 293 (353)
T PLN00034 221 TMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMS-------QP 293 (353)
T ss_pred ccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhcc-------CC
Confidence 221 12234456777887532 23456899999999999999999998633211111111100000 01
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 713 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
+..... ...++.+++.+||+.||++||++.|+++|+|+.....
T Consensus 294 ~~~~~~----~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~~ 336 (353)
T PLN00034 294 PEAPAT----ASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQP 336 (353)
T ss_pred CCCCCc----cCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCCc
Confidence 111122 2344899999999999999999999999999987643
|
|
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-38 Score=337.73 Aligned_cols=245 Identities=18% Similarity=0.219 Sum_probs=195.6
Q ss_pred CccccCCceeEEEEEeC-CCcEEEEEEccccCC---CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEE
Q 004195 486 SFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK---SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLI 561 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV 561 (769)
+.||+|+||.||+++.. +|+.||+|.++.... .....+.+|+++++.++||||+++++++.+.+ ..++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~-------~~~lv 73 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD-------RLCFV 73 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCC-------EEEEE
Confidence 46999999999999965 789999999975422 22356778999999999999999999887643 48999
Q ss_pred EeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhccccc-CCCCCccccCccccceeeCCCceeeecCCCCchhhhcc
Q 004195 562 FEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHT-GIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEAR 640 (769)
Q Consensus 562 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~ 640 (769)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+||+|||+++.....
T Consensus 74 ~E~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~ 149 (325)
T cd05594 74 MEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 149 (325)
T ss_pred EeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCC
Confidence 99999999999887554 68999999999999999999996 6 9999999999999999999999999998643211
Q ss_pred C--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccCC
Q 004195 641 G--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNE 718 (769)
Q Consensus 641 ~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 718 (769)
. .....++..|++||.+.+..++.++|||||||++|||+||+.||...........+.. . ...+...
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~---~--------~~~~p~~ 218 (325)
T cd05594 150 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM---E--------EIRFPRT 218 (325)
T ss_pred CcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhc---C--------CCCCCCC
Confidence 1 1222345678889999888899999999999999999999999976543322221110 0 0111122
Q ss_pred CCHHHHHHHHHHHHHcCcCCCCCCC-----CHHHHHHHhHhhh
Q 004195 719 CSDESLKRMMELCLRCLSNEPKDRP-----SVEDTLWNLQFAT 756 (769)
Q Consensus 719 ~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~~~~ 756 (769)
.++ ++.+++.+|++.||++|+ ++.++++|+|+..
T Consensus 219 ~~~----~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~ 257 (325)
T cd05594 219 LSP----EAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAG 257 (325)
T ss_pred CCH----HHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCC
Confidence 333 488999999999999996 9999999999864
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-38 Score=330.30 Aligned_cols=256 Identities=16% Similarity=0.201 Sum_probs=201.1
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC---CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK---SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
.|+..+.||+|+||.||++... +++.||||.+..... .....+.+|+.++++++||||+++++++.+.+
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------- 73 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD------- 73 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCC-------
Confidence 3777899999999999999965 689999999975422 22345778999999999999999999987643
Q ss_pred eEEEEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 557 IIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.++|+|||++.
T Consensus 74 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~ 150 (285)
T cd05605 74 ALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAV 150 (285)
T ss_pred eEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCce
Confidence 389999999999999888643 34689999999999999999999998 99999999999999999999999999986
Q ss_pred hhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCcc
Q 004195 636 LAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 636 ~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
....... ....+...|++||.+....++.++|||||||++|||++|+.||.........+.+...... ..
T Consensus 151 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~-------~~-- 221 (285)
T cd05605 151 EIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKE-------DQ-- 221 (285)
T ss_pred ecCCCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhh-------cc--
Confidence 5432221 1223345678899988888999999999999999999999999764332111111110000 00
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCC-----CHHHHHHHhHhhhh
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRP-----SVEDTLWNLQFATQ 757 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~~~~~ 757 (769)
..++......+.+++.+||+.||++|| +++++++|+|+...
T Consensus 222 --~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05605 222 --EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTA 267 (285)
T ss_pred --cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCC
Confidence 112222334588999999999999999 89999999999853
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-38 Score=350.16 Aligned_cols=272 Identities=16% Similarity=0.240 Sum_probs=198.8
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCC-CCc
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD-PSI 555 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~-~~~ 555 (769)
..++|...+.||+|+||.||+|+.. +++.||||++... .....+|+.++++++|||||++++++....... ...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~----~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD----PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC----cchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 3457999999999999999999975 6899999988532 234567999999999999999999876433211 112
Q ss_pred ceEEEEEeccCCCchhhhhc---CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc-eeeecCC
Q 004195 556 SIIYLIFEYAPNETLRSFIS---GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF-HVKINSY 631 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~-~~kl~DF 631 (769)
..+++||||+++ +|.+++. .....+++..+..++.|+++||+|||+. +|+||||||+|||++.++ .+||+||
T Consensus 140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~DF 215 (440)
T PTZ00036 140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCDF 215 (440)
T ss_pred eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeecc
Confidence 346799999984 7777664 3344789999999999999999999998 999999999999998664 7999999
Q ss_pred CCchhhhccCC-cceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchh-HHHHhhhhhccccc-ccc
Q 004195 632 NLPLLAEARGK-GSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVV-VLVKDLLQVNIGTD-EAR 707 (769)
Q Consensus 632 Gla~~~~~~~~-~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~-~~~~~~~~~~~~~~-~~~ 707 (769)
|+++....... ....++..|++||.+.+ ..++.++|||||||++|||+||++||.+... +....+++...... +..
T Consensus 216 Gla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~ 295 (440)
T PTZ00036 216 GSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQL 295 (440)
T ss_pred ccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 99976543222 22233456788998765 4689999999999999999999999976432 22222222110000 000
Q ss_pred -------ccccCc-----cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 708 -------KSIVDP-----AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 708 -------~~~~d~-----~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.++.-| .+...++...+.++.+++.+||+.||.+|||+.|+++|+||...
T Consensus 296 ~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~ 357 (440)
T PTZ00036 296 KEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDL 357 (440)
T ss_pred HHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhh
Confidence 000000 01111122233468999999999999999999999999999754
|
|
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-38 Score=332.35 Aligned_cols=266 Identities=14% Similarity=0.215 Sum_probs=203.0
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC-ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS-SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|+..+.||+|+||.||+++.. +|..+|+|.++..... ..+++.+|++++.+++||||++++++|.+.+ .
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-------~ 73 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDG-------E 73 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC-------E
Confidence 46888999999999999999965 6889999998754221 2356889999999999999999999998643 4
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhccccc-CCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHT-GIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
.++||||+++++|.+++++.. .+++..+..++.|+++||+|||+ . +++||||||+||+++.++.+||+|||++..
T Consensus 74 ~~lv~ey~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 149 (308)
T cd06615 74 ISICMEHMDGGSLDQVLKKAG-RIPENILGKISIAVLRGLTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 149 (308)
T ss_pred EEEEeeccCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhhC---CEEECCCChHHEEEecCCcEEEccCCCccc
Confidence 899999999999999998553 68999999999999999999997 4 899999999999999999999999999865
Q ss_pred hhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccc---------
Q 004195 637 AEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEAR--------- 707 (769)
Q Consensus 637 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~--------- 707 (769)
..........+...|.+||...+..++.++|||||||++|||+||+.|+..........+...........
T Consensus 150 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (308)
T cd06615 150 LIDSMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGH 229 (308)
T ss_pred ccccccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCC
Confidence 53332333334456788998877889999999999999999999999986543322222221110000000
Q ss_pred ----------ccccCc---cccCCCC-HHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 708 ----------KSIVDP---AVMNECS-DESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 708 ----------~~~~d~---~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.+..+. ......+ .....++.+++.+||+.+|++|||++|+++|+|+..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~ 292 (308)
T cd06615 230 PPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKR 292 (308)
T ss_pred CCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhh
Confidence 000000 0000000 112345889999999999999999999999999975
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-38 Score=340.30 Aligned_cols=253 Identities=19% Similarity=0.260 Sum_probs=202.4
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|...+.||+|+||+||+|+.. +|+.||||+++... ......+.+|++++..++||||+++++++.+.+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~------ 74 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEE------ 74 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCC------
Confidence 46888999999999999999976 79999999997542 233456889999999999999999999887643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+++|+|.+++.+. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 75 -~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~ 149 (350)
T cd05573 75 -HLYLVMEYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCK 149 (350)
T ss_pred -eEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCc
Confidence 489999999999999999865 3689999999999999999999998 99999999999999999999999999986
Q ss_pred hhhccC-------------------------------CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCC
Q 004195 636 LAEARG-------------------------------KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPI 684 (769)
Q Consensus 636 ~~~~~~-------------------------------~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p 684 (769)
...... .....++..|++||.+.+..++.++|||||||++|||++|+.|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~P 229 (350)
T cd05573 150 KMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPP 229 (350)
T ss_pred cCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCC
Confidence 543322 1122345667889999888999999999999999999999999
Q ss_pred CCCchhHHH-HhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCC-HHHHHHHhHhhh
Q 004195 685 TSENVVVLV-KDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPS-VEDTLWNLQFAT 756 (769)
Q Consensus 685 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~~l~~~~ 756 (769)
|........ ..+.... . ...-|. ...++ ..+.+++.+|+. ||++||+ ++|+++|+|+..
T Consensus 230 f~~~~~~~~~~~i~~~~----~---~~~~p~-~~~~~----~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~ 290 (350)
T cd05573 230 FYSDTLQETYNKIINWK----E---SLRFPP-DPPVS----PEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKG 290 (350)
T ss_pred CCCCCHHHHHHHHhccC----C---cccCCC-CCCCC----HHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCC
Confidence 976543221 1111100 0 000011 01123 348899999997 9999999 999999999864
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=340.92 Aligned_cols=253 Identities=16% Similarity=0.207 Sum_probs=195.7
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC---CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK---SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
.|+..+.||+|+||+||+|+.. +++.||||++..... ...+.+.+|++++++++|||||++++++.+.+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~------- 74 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKD------- 74 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCC-------
Confidence 5778899999999999999965 689999999975432 22356889999999999999999999998643
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++||||+++|+|.+++.+.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 75 ~~~lv~E~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~ 150 (381)
T cd05626 75 NLYFVMDYIPGGDMMSLLIRME-VFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTG 150 (381)
T ss_pred EEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCcc
Confidence 4899999999999999997554 688999999999999999999998 999999999999999999999999998743
Q ss_pred hhccC-------------------------------------------------CcceeecCCCcchhhhccCCCCCCCC
Q 004195 637 AEARG-------------------------------------------------KGSAEVSSPAKKTSVLARTEQDDKSD 667 (769)
Q Consensus 637 ~~~~~-------------------------------------------------~~~~~~~~~~~~pe~~~~~~~~~ksD 667 (769)
..... .....++..|++||.+.+..++.++|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~D 230 (381)
T cd05626 151 FRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCD 230 (381)
T ss_pred cccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccc
Confidence 21000 00123445678899988888999999
Q ss_pred eeehhHHHHHHHhCCCCCCCchhHHH-HhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHH--cCcCCCCCCCC
Q 004195 668 VYDIGIILIEIIVGRPITSENVVVLV-KDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLR--CLSNEPKDRPS 744 (769)
Q Consensus 668 VwS~Gvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~--cl~~dP~~RPs 744 (769)
||||||++|||+||++||........ ........ ...-|. ....++ ++.+++.+ |+..+|..||+
T Consensus 231 iwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~-------~~~~~~-~~~~s~----~~~dli~~ll~~~~~~~~R~~ 298 (381)
T cd05626 231 WWSVGVILFEMLVGQPPFLAPTPTETQLKVINWEN-------TLHIPP-QVKLSP----EAVDLITKLCCSAEERLGRNG 298 (381)
T ss_pred eeehhhHHHHHHhCCCCCcCCCHHHHHHHHHcccc-------ccCCCC-CCCCCH----HHHHHHHHHccCcccccCCCC
Confidence 99999999999999999976443221 11111000 000000 012233 37778877 55667777999
Q ss_pred HHHHHHHhHhhh
Q 004195 745 VEDTLWNLQFAT 756 (769)
Q Consensus 745 ~~evl~~l~~~~ 756 (769)
++|+++|+||..
T Consensus 299 ~~~~l~hp~f~~ 310 (381)
T cd05626 299 ADDIKAHPFFSE 310 (381)
T ss_pred HHHHhcCcccCC
Confidence 999999999864
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-38 Score=325.48 Aligned_cols=250 Identities=18% Similarity=0.249 Sum_probs=195.9
Q ss_pred cCCCCcCccccCCceeEEEEEeC----CCcEEEEEEccccCCC-ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT----DGTLVAIRSLKMSKKS-SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~----~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
++|+..+.||+|+||.||+|++. .+..||+|.++..... ....+.+|+.++++++||||++++|++...+
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----- 79 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGN----- 79 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCC-----
Confidence 45778899999999999999853 3668999999864322 2356889999999999999999999987643
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
..++||||+++|+|.+++......++|.+++.++.|++.||+|||+. +++||||||+||+++.++.+|++|||.+
T Consensus 80 --~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~ 154 (266)
T cd05064 80 --TMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRL 154 (266)
T ss_pred --CcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCccc
Confidence 38999999999999999986555789999999999999999999998 9999999999999999999999999987
Q ss_pred hhhhccCC-c--ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccc
Q 004195 635 LLAEARGK-G--SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSI 710 (769)
Q Consensus 635 ~~~~~~~~-~--~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (769)
........ . ....+..|++||.+.+..++.++|||||||++||+++ |++||...........+...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~---------- 224 (266)
T cd05064 155 QEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDG---------- 224 (266)
T ss_pred ccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCC----------
Confidence 54321111 0 1111235778998888899999999999999999775 99998765433222211110
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 711 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
..+.....++ ..+.+++.+||+.+|++||+++|+++.+.
T Consensus 225 ~~~~~~~~~~----~~~~~li~~c~~~~p~~RP~~~~i~~~l~ 263 (266)
T cd05064 225 FRLPAPRNCP----NLLHQLMLDCWQKERGERPRFSQIHSILS 263 (266)
T ss_pred CCCCCCCCCC----HHHHHHHHHHcCCCchhCCCHHHHHHHHH
Confidence 0111112233 34889999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-38 Score=341.72 Aligned_cols=253 Identities=18% Similarity=0.252 Sum_probs=199.4
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|+..+.||+|+||.||+|+.. +|+.||||++.... ......+.+|++++..++||||+++++++.+.+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~------ 74 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDEN------ 74 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCC------
Confidence 47888999999999999999976 68999999997542 222356788999999999999999999998644
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 75 -~~~lv~E~~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~ 149 (364)
T cd05599 75 -YLYLIMEYLPGGDMMTLLMKKD-TFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCT 149 (364)
T ss_pred -eEEEEECCCCCcHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccce
Confidence 4899999999999999997554 689999999999999999999998 99999999999999999999999999985
Q ss_pred hhhccCC----------------------------------------cceeecCCCcchhhhccCCCCCCCCeeehhHHH
Q 004195 636 LAEARGK----------------------------------------GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIIL 675 (769)
Q Consensus 636 ~~~~~~~----------------------------------------~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil 675 (769)
....... ....++..|++||.+....++.++|||||||++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il 229 (364)
T cd05599 150 GLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIM 229 (364)
T ss_pred eccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHH
Confidence 4321100 011244567889998888899999999999999
Q ss_pred HHHHhCCCCCCCchhHHH-HhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCC---HHHHHHH
Q 004195 676 IEIIVGRPITSENVVVLV-KDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPS---VEDTLWN 751 (769)
Q Consensus 676 ~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~~ 751 (769)
|||++|++||........ ....... . ....|.. ...+ ..+.+++.+|+. +|.+|++ ++|+++|
T Consensus 230 ~el~~G~~Pf~~~~~~~~~~~i~~~~----~---~~~~~~~-~~~s----~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 230 YEMLVGYPPFCSDNPQETYRKIINWK----E---TLQFPDE-VPLS----PEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred HHhhcCCCCCCCCCHHHHHHHHHcCC----C---ccCCCCC-CCCC----HHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 999999999976543222 1111110 0 0000100 0122 347888999996 8999998 9999999
Q ss_pred hHhhh
Q 004195 752 LQFAT 756 (769)
Q Consensus 752 l~~~~ 756 (769)
+|+..
T Consensus 297 ~~~~~ 301 (364)
T cd05599 297 PFFKG 301 (364)
T ss_pred CCcCC
Confidence 99854
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=332.91 Aligned_cols=245 Identities=16% Similarity=0.233 Sum_probs=194.3
Q ss_pred CccccCCceeEEEEEe----CCCcEEEEEEccccC----CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 486 SFMCDASHGQIYKGKL----TDGTLVAIRSLKMSK----KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~----~~g~~vAvK~~~~~~----~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
+.||+|+||.||+++. .+++.||||.++... ......+.+|++++++++||||+++++++.+.+ .
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~-------~ 74 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGG-------K 74 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCC-------e
Confidence 6799999999999985 257899999997532 122345788999999999999999999987643 3
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.++||||+++|+|.+++.+.+ .+.+..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 150 (323)
T cd05584 75 LYLILEYLSGGELFMHLEREG-IFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKES 150 (323)
T ss_pred EEEEEeCCCCchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeec
Confidence 899999999999999997554 678888899999999999999998 9999999999999999999999999998643
Q ss_pred hccC--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccc
Q 004195 638 EARG--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAV 715 (769)
Q Consensus 638 ~~~~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 715 (769)
.... .....++..|++||.+.+..++.++|||||||++|||++|++||...........+. .. ...+
T Consensus 151 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~---~~--------~~~~ 219 (323)
T cd05584 151 IHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKIL---KG--------KLNL 219 (323)
T ss_pred ccCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHH---cC--------CCCC
Confidence 2211 112234556788999888889999999999999999999999997654322111111 00 0111
Q ss_pred cCCCCHHHHHHHHHHHHHcCcCCCCCCC-----CHHHHHHHhHhhh
Q 004195 716 MNECSDESLKRMMELCLRCLSNEPKDRP-----SVEDTLWNLQFAT 756 (769)
Q Consensus 716 ~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~~~~ 756 (769)
....+ ..+.+++.+|++.||++|| +++++++|+|+..
T Consensus 220 ~~~~~----~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~ 261 (323)
T cd05584 220 PPYLT----PEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRH 261 (323)
T ss_pred CCCCC----HHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCC
Confidence 12223 3488999999999999999 8999999999753
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=333.16 Aligned_cols=245 Identities=16% Similarity=0.209 Sum_probs=194.8
Q ss_pred CccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCCcceEEE
Q 004195 486 SFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPSISIIYL 560 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~~~l 560 (769)
+.||+|+||.||+|+.+ +++.||||+++... ....+.+..|..++..+ +||||+++++++.+.+ ..++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~-------~~~i 73 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPD-------RLFF 73 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCC-------EEEE
Confidence 46999999999999976 68999999997542 22345677888888876 6999999999987643 4899
Q ss_pred EEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhcc
Q 004195 561 IFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEAR 640 (769)
Q Consensus 561 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~ 640 (769)
||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 74 v~Ey~~~g~L~~~i~~~~-~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~ 149 (320)
T cd05590 74 VMEFVNGGDLMFHIQKSR-RFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN 149 (320)
T ss_pred EEcCCCCchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC
Confidence 999999999999987554 689999999999999999999998 9999999999999999999999999998643211
Q ss_pred --CCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccCC
Q 004195 641 --GKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNE 718 (769)
Q Consensus 641 --~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 718 (769)
......++..|++||.+.+..++.++|||||||++|||+||+.||...........+.. . .......
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~---~--------~~~~~~~ 218 (320)
T cd05590 150 GKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILN---D--------EVVYPTW 218 (320)
T ss_pred CCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhc---C--------CCCCCCC
Confidence 11222345567889998888899999999999999999999999976543322221111 0 0011112
Q ss_pred CCHHHHHHHHHHHHHcCcCCCCCCCCH------HHHHHHhHhhh
Q 004195 719 CSDESLKRMMELCLRCLSNEPKDRPSV------EDTLWNLQFAT 756 (769)
Q Consensus 719 ~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~~l~~~~ 756 (769)
.+ .++.+++.+|++.||++||++ +++++|+||..
T Consensus 219 ~~----~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~ 258 (320)
T cd05590 219 LS----QDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKE 258 (320)
T ss_pred CC----HHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCC
Confidence 22 348899999999999999998 99999999853
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=332.35 Aligned_cols=245 Identities=17% Similarity=0.210 Sum_probs=194.7
Q ss_pred CccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCCcceEEE
Q 004195 486 SFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPSISIIYL 560 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~~~l 560 (769)
+.||+|+||.||+|+.. +++.||||+++... ....+.+..|.+++..+ +||||+++++++.+.. ..++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~-------~~~l 73 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKD-------RLFF 73 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCC-------eEEE
Confidence 46999999999999976 58899999997542 22335577899998866 7999999999997643 3899
Q ss_pred EEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhcc
Q 004195 561 IFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEAR 640 (769)
Q Consensus 561 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~ 640 (769)
||||+++|+|.+.+.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 74 v~E~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~ 149 (321)
T cd05591 74 VMEYVNGGDLMFQIQRSR-KFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILN 149 (321)
T ss_pred EEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccC
Confidence 999999999999887554 689999999999999999999998 9999999999999999999999999998643221
Q ss_pred C--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccCC
Q 004195 641 G--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNE 718 (769)
Q Consensus 641 ~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 718 (769)
. .....++..|++||.+.+..++.++|||||||++|||+||++||...........+.. . +......
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~---~--------~~~~p~~ 218 (321)
T cd05591 150 GVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILH---D--------DVLYPVW 218 (321)
T ss_pred CccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHc---C--------CCCCCCC
Confidence 1 1222345678889998888899999999999999999999999976543322221110 0 0011111
Q ss_pred CCHHHHHHHHHHHHHcCcCCCCCCC-------CHHHHHHHhHhhh
Q 004195 719 CSDESLKRMMELCLRCLSNEPKDRP-------SVEDTLWNLQFAT 756 (769)
Q Consensus 719 ~~~~~~~~l~~li~~cl~~dP~~RP-------s~~evl~~l~~~~ 756 (769)
.+ .++.+++.+|++.||++|| +++++++|+|+..
T Consensus 219 ~~----~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~ 259 (321)
T cd05591 219 LS----KEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKE 259 (321)
T ss_pred CC----HHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCC
Confidence 22 3488999999999999999 9999999999854
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=327.32 Aligned_cols=247 Identities=17% Similarity=0.200 Sum_probs=193.4
Q ss_pred cccCCceeEEEEEeC-CCcEEEEEEccccCCC---ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEEEe
Q 004195 488 MCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS---SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFE 563 (769)
Q Consensus 488 iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~---~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV~E 563 (769)
||+|+||+||++... +|+.||+|.+...... ..+.+..|++++++++||||+++.+++.... ..++|||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~-------~~~lv~e 73 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKT-------DLCLVMT 73 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCC-------eEEEEEe
Confidence 699999999999965 7899999998754222 2245778999999999999999999887533 3899999
Q ss_pred ccCCCchhhhhcC---CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhcc
Q 004195 564 YAPNETLRSFISG---PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEAR 640 (769)
Q Consensus 564 y~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~ 640 (769)
|+++|+|.+++.. ....+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||++......
T Consensus 74 ~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 150 (280)
T cd05608 74 IMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDG 150 (280)
T ss_pred CCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCC
Confidence 9999999988742 334689999999999999999999998 9999999999999999999999999998654332
Q ss_pred CC--cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHH-HhhhhhccccccccccccCccccC
Q 004195 641 GK--GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLV-KDLLQVNIGTDEARKSIVDPAVMN 717 (769)
Q Consensus 641 ~~--~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~ 717 (769)
.. ....++..|++||.+.+..++.++|||||||++|||++|+.||........ ....... .... .
T Consensus 151 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~----------~~~~--~ 218 (280)
T cd05608 151 QSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRI----------LNDS--V 218 (280)
T ss_pred CccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhh----------cccC--C
Confidence 21 112334567889999888999999999999999999999999875332111 1111100 0000 0
Q ss_pred CCCHHHHHHHHHHHHHcCcCCCCCCC-----CHHHHHHHhHhhh
Q 004195 718 ECSDESLKRMMELCLRCLSNEPKDRP-----SVEDTLWNLQFAT 756 (769)
Q Consensus 718 ~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~~~~ 756 (769)
..++..+..+.+++.+|++.||++|| +++++++|+||..
T Consensus 219 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~ 262 (280)
T cd05608 219 TYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRD 262 (280)
T ss_pred CCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhc
Confidence 11222334588999999999999999 8899999999975
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-38 Score=340.62 Aligned_cols=254 Identities=19% Similarity=0.251 Sum_probs=195.1
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|+..+.||+|+||+||+|+.. +++.||||+++... ......+.+|+.++.+++||||+++++++.+..
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~------ 74 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKL------ 74 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCC------
Confidence 47888999999999999999865 68999999997542 122346788999999999999999999987643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+++|+|.+++.+.+ .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 75 -~~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~ 149 (363)
T cd05628 75 -NLYLIMEFLPGGDMMTLLMKKD-TLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCT 149 (363)
T ss_pred -eEEEEEcCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCcc
Confidence 3899999999999999998654 689999999999999999999998 99999999999999999999999999986
Q ss_pred hhhccCC-------------------------------------cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHH
Q 004195 636 LAEARGK-------------------------------------GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEI 678 (769)
Q Consensus 636 ~~~~~~~-------------------------------------~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~el 678 (769)
....... ....++..|++||.+.+..++.++|||||||++|||
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~el 229 (363)
T cd05628 150 GLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEM 229 (363)
T ss_pred cccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHH
Confidence 4321100 112345567889998888899999999999999999
Q ss_pred HhCCCCCCCchhHH-HHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCc--CCCCCCCCHHHHHHHhHhh
Q 004195 679 IVGRPITSENVVVL-VKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLS--NEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 679 ltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~--~dP~~RPs~~evl~~l~~~ 755 (769)
++|++||....... ...+.... .....|.. ...++ ++.+++.+++. .++..||+++|+++|+||.
T Consensus 230 l~G~~Pf~~~~~~~~~~~i~~~~-------~~~~~p~~-~~~s~----~~~~li~~l~~~~~~r~~r~~~~ei~~hp~f~ 297 (363)
T cd05628 230 LIGYPPFCSETPQETYKKVMNWK-------ETLIFPPE-VPISE----KAKDLILRFCCEWEHRIGAPGVEEIKTNPFFE 297 (363)
T ss_pred HhCCCCCCCCCHHHHHHHHHcCc-------CcccCCCc-CCCCH----HHHHHHHHHcCChhhcCCCCCHHHHhCCCCCC
Confidence 99999997644322 22211110 00001110 01222 36667766443 3344579999999999986
Q ss_pred h
Q 004195 756 T 756 (769)
Q Consensus 756 ~ 756 (769)
.
T Consensus 298 ~ 298 (363)
T cd05628 298 G 298 (363)
T ss_pred C
Confidence 4
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-38 Score=340.97 Aligned_cols=252 Identities=19% Similarity=0.267 Sum_probs=194.2
Q ss_pred cCCCCcCccccCCceeEEEEEeC------CCcEEEEEEccccCCC-ChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT------DGTLVAIRSLKMSKKS-SPHMYTYHIELISKL-RHSNLVSALGHCLDFSLD 551 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~ 551 (769)
++|+..+.||+|+||.||+|+.. ++..||||+++..... ..+.+.+|+++++.+ +|+|||+++++|.+...
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~- 116 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP- 116 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC-
Confidence 46788899999999999999842 3458999999754322 235688999999999 89999999999976443
Q ss_pred CCCcceEEEEEeccCCCchhhhhcCC------------------------------------------------------
Q 004195 552 DPSISIIYLIFEYAPNETLRSFISGP------------------------------------------------------ 577 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~~~------------------------------------------------------ 577 (769)
.++||||+++|+|.++++..
T Consensus 117 ------~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (374)
T cd05106 117 ------VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSS 190 (374)
T ss_pred ------eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccc
Confidence 89999999999999988521
Q ss_pred ---------------CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhccCC
Q 004195 578 ---------------GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGK 642 (769)
Q Consensus 578 ---------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~ 642 (769)
...+++.++.+++.||++||+|||+. +|+||||||+|||+++++.+||+|||+++.......
T Consensus 191 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~ 267 (374)
T cd05106 191 SSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN 267 (374)
T ss_pred ccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcc
Confidence 12478899999999999999999998 999999999999999999999999999865432221
Q ss_pred cc----eeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHH-HHhhhhhccccccccccccCcccc
Q 004195 643 GS----AEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVL-VKDLLQVNIGTDEARKSIVDPAVM 716 (769)
Q Consensus 643 ~~----~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~ 716 (769)
.. ......|++||......++.++|||||||++|||++ |+.||....... ........ ..+...
T Consensus 268 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~----------~~~~~~ 337 (374)
T cd05106 268 YVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRG----------YQMSRP 337 (374)
T ss_pred eeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcc----------cCccCC
Confidence 11 111234788999888889999999999999999997 999986543211 11111100 011111
Q ss_pred CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 717 NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 717 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
...+ .++.+++.+||+.||++|||+.+|++.+..+
T Consensus 338 ~~~~----~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 338 DFAP----PEIYSIMKMCWNLEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred CCCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 1122 3488999999999999999999999988653
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=331.14 Aligned_cols=245 Identities=18% Similarity=0.275 Sum_probs=193.6
Q ss_pred CccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCCcceEEE
Q 004195 486 SFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPSISIIYL 560 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~~~l 560 (769)
+.||+|+||.||+|+.. +++.||||.++... ....+.+..|..++... +||||+++++++.+.+ ..++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~-------~~~l 73 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKE-------NLFF 73 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCC-------EEEE
Confidence 46999999999999976 58899999997542 22335567788888764 8999999999987643 3899
Q ss_pred EEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhcc
Q 004195 561 IFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEAR 640 (769)
Q Consensus 561 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~ 640 (769)
||||+++|+|.+++.... .+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 74 v~ey~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 149 (316)
T cd05619 74 VMEYLNGGDLMFHIQSCH-KFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLG 149 (316)
T ss_pred EEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCC
Confidence 999999999999997543 689999999999999999999998 9999999999999999999999999998642211
Q ss_pred --CCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccCC
Q 004195 641 --GKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNE 718 (769)
Q Consensus 641 --~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 718 (769)
......++..|++||.+.+..++.++|||||||++|||++|+.||...........+... .+.....
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~-----------~~~~~~~ 218 (316)
T cd05619 150 DAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMD-----------NPCYPRW 218 (316)
T ss_pred CCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-----------CCCCCcc
Confidence 112223455678899988888999999999999999999999999765433222211110 1111112
Q ss_pred CCHHHHHHHHHHHHHcCcCCCCCCCCHH-HHHHHhHhhh
Q 004195 719 CSDESLKRMMELCLRCLSNEPKDRPSVE-DTLWNLQFAT 756 (769)
Q Consensus 719 ~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl~~l~~~~ 756 (769)
.+ ..+.+++.+|++.||++||++. ++.+|+|+..
T Consensus 219 ~~----~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~ 253 (316)
T cd05619 219 LT----REAKDILVKLFVREPERRLGVKGDIRQHPFFRE 253 (316)
T ss_pred CC----HHHHHHHHHHhccCHhhcCCChHHHHcCcccCC
Confidence 22 3478999999999999999996 8999999765
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-37 Score=331.48 Aligned_cols=245 Identities=18% Similarity=0.258 Sum_probs=193.7
Q ss_pred CccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCCcceEEE
Q 004195 486 SFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPSISIIYL 560 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~~~l 560 (769)
+.||+|+||.||+|+.. +|+.||+|.++... ....+.+..|..++... +||||+++++++.+.+ ..++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~-------~~~l 73 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKE-------HLFF 73 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCC-------EEEE
Confidence 46999999999999976 68999999997542 22345567788888764 8999999999987643 4899
Q ss_pred EEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhc-
Q 004195 561 IFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEA- 639 (769)
Q Consensus 561 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~- 639 (769)
||||+++|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 74 v~E~~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 149 (316)
T cd05620 74 VMEFLNGGDLMFHIQDKG-RFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG 149 (316)
T ss_pred EECCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccC
Confidence 999999999999987543 689999999999999999999998 999999999999999999999999999864221
Q ss_pred -cCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccCC
Q 004195 640 -RGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNE 718 (769)
Q Consensus 640 -~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 718 (769)
.......++..|++||.+.+..++.++|||||||++|||++|+.||.........+.+... .+.+...
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~-----------~~~~~~~ 218 (316)
T cd05620 150 DNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVD-----------TPHYPRW 218 (316)
T ss_pred CCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-----------CCCCCCC
Confidence 1112233456778899998889999999999999999999999999765433322211110 1111122
Q ss_pred CCHHHHHHHHHHHHHcCcCCCCCCCCH-HHHHHHhHhhh
Q 004195 719 CSDESLKRMMELCLRCLSNEPKDRPSV-EDTLWNLQFAT 756 (769)
Q Consensus 719 ~~~~~~~~l~~li~~cl~~dP~~RPs~-~evl~~l~~~~ 756 (769)
.+ .++.+++.+|++.||++||++ +++++|+||..
T Consensus 219 ~~----~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~ 253 (316)
T cd05620 219 IT----KESKDILEKLFERDPTRRLGVVGNIRGHPFFKT 253 (316)
T ss_pred CC----HHHHHHHHHHccCCHHHcCCChHHHHcCCCcCC
Confidence 23 348899999999999999998 58888999854
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=324.71 Aligned_cols=258 Identities=17% Similarity=0.239 Sum_probs=199.5
Q ss_pred HHHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 475 LKEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 475 l~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
++.+++++.....||+|+||.||+|+.. ++..||+|.+........+.+.+|++++++++|+||+++++++.+.+
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~---- 78 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENG---- 78 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCC----
Confidence 4456777888899999999999999965 68899999987654445567899999999999999999999987643
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCC--CHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC-CceeeecC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKL--TWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE-NFHVKINS 630 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l--~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~-~~~~kl~D 630 (769)
..++|+||+++++|.+++......+ ++..+..++.|+++||+|||+. +|+||||||+||+++. ++.+||+|
T Consensus 79 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~d 152 (268)
T cd06624 79 ---FFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISD 152 (268)
T ss_pred ---EEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEec
Confidence 4899999999999999998543345 8888999999999999999998 9999999999999976 67999999
Q ss_pred CCCchhhhccCC--cceeecCCCcchhhhccC--CCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccc
Q 004195 631 YNLPLLAEARGK--GSAEVSSPAKKTSVLART--EQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEA 706 (769)
Q Consensus 631 FGla~~~~~~~~--~~~~~~~~~~~pe~~~~~--~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (769)
||.+........ ........|.+||..... .++.++|||||||++|||++|++|+..........+......
T Consensus 153 fg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~---- 228 (268)
T cd06624 153 FGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFK---- 228 (268)
T ss_pred chhheecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhc----
Confidence 999865432211 111233456778876553 378999999999999999999999865322111111000000
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 707 RKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 707 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
..+.+ +.....++.+++.+||+.+|++|||+.|++.|+|+
T Consensus 229 ----~~~~~----~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 229 ----IHPEI----PESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred ----cCCCC----CcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 01111 22233448899999999999999999999999985
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-38 Score=336.75 Aligned_cols=254 Identities=18% Similarity=0.223 Sum_probs=199.9
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC---CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK---SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|...+.||+|+||.||+|+.. +|+.||+|+++.... ...+.+.+|+.+++.++||||+++++++.+.+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~------ 74 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKD------ 74 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCC------
Confidence 46888999999999999999975 789999999985422 23456888999999999999999999887633
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+++|+|.+++.+....+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 75 -~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~ 150 (330)
T cd05601 75 -NLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAA 150 (330)
T ss_pred -eEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCe
Confidence 48999999999999999986645799999999999999999999998 99999999999999999999999999986
Q ss_pred hhhccCCc---ceeecCCCcchhhhc------cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhcccccc
Q 004195 636 LAEARGKG---SAEVSSPAKKTSVLA------RTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTDE 705 (769)
Q Consensus 636 ~~~~~~~~---~~~~~~~~~~pe~~~------~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~~ 705 (769)
........ ...++..|++||.+. ...++.++|||||||++|||+||+.||....... ...+... .
T Consensus 151 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~----~- 225 (330)
T cd05601 151 RLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNF----Q- 225 (330)
T ss_pred ECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcC----C-
Confidence 55332211 122345678888875 4567899999999999999999999997644322 2221110 0
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 706 ARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 706 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
..... |. ....+ ..+.+++.+|++ +|++||+++++++|+|+..
T Consensus 226 ~~~~~--~~-~~~~~----~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~ 268 (330)
T cd05601 226 RFLKF--PE-DPKVS----SDFLDLIQSLLC-GQKERLGYEGLCCHPFFSK 268 (330)
T ss_pred CccCC--CC-CCCCC----HHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCC
Confidence 00000 00 01122 348889999998 9999999999999999864
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=334.95 Aligned_cols=262 Identities=19% Similarity=0.270 Sum_probs=204.8
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhcc-CC-----ceeeEeeeeeccCCCCC
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLR-HS-----NLVSALGHCLDFSLDDP 553 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-H~-----nIv~l~~~~~~~~~~~~ 553 (769)
+|++.++||+|.||.|-||... +++.||||+++... .-..+...|+.+|..++ |. |+|++++||...+
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~---- 261 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRN---- 261 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccc----
Confidence 6889999999999999999965 79999999998542 33456778999999997 43 9999999998644
Q ss_pred CcceEEEEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC--ceeeecC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN--FHVKINS 630 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~--~~~kl~D 630 (769)
|.|||+|.+. -+|+++++.+ -..++...+..++.||+.||.+||+. +|||+||||+||||.+- ..+||+|
T Consensus 262 ---HlciVfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVID 334 (586)
T KOG0667|consen 262 ---HLCIVFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVID 334 (586)
T ss_pred ---ceeeeehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEe
Confidence 5999999996 5999999843 34689999999999999999999998 99999999999999654 3699999
Q ss_pred CCCchhhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCch-hHHHHhhhhhcccccc----
Q 004195 631 YNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENV-VVLVKDLLQVNIGTDE---- 705 (769)
Q Consensus 631 FGla~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~-~~~~~~~~~~~~~~~~---- 705 (769)
||.|........ +..-...|++||++.+.+|+++.||||||||+.||+||.|.|.++. .+.+..+++. .+.++
T Consensus 335 FGSSc~~~q~vy-tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~-lG~Pp~~mL 412 (586)
T KOG0667|consen 335 FGSSCFESQRVY-TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEV-LGLPPPKML 412 (586)
T ss_pred cccccccCCcce-eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHH-hCCCCHHHH
Confidence 999987765554 4445567889999999999999999999999999999998887644 3333333322 11100
Q ss_pred ----ccccccCc---------------------------------ccc-------CCCCHHHHHHHHHHHHHcCcCCCCC
Q 004195 706 ----ARKSIVDP---------------------------------AVM-------NECSDESLKRMMELCLRCLSNEPKD 741 (769)
Q Consensus 706 ----~~~~~~d~---------------------------------~~~-------~~~~~~~~~~l~~li~~cl~~dP~~ 741 (769)
.....++. ... ..........+.+++.+|+.+||.+
T Consensus 413 ~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~ 492 (586)
T KOG0667|consen 413 DTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAE 492 (586)
T ss_pred HhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchh
Confidence 00000000 000 0011133456899999999999999
Q ss_pred CCCHHHHHHHhHhhh
Q 004195 742 RPSVEDTLWNLQFAT 756 (769)
Q Consensus 742 RPs~~evl~~l~~~~ 756 (769)
|+|..++++|+|+..
T Consensus 493 R~tp~qal~Hpfl~~ 507 (586)
T KOG0667|consen 493 RITPAQALNHPFLTG 507 (586)
T ss_pred cCCHHHHhcCccccc
Confidence 999999999999873
|
|
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=326.42 Aligned_cols=267 Identities=17% Similarity=0.274 Sum_probs=197.8
Q ss_pred cCCCCcCccccCCceeEEEEEeC-----CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-----DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-----~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
.+|...+.||+|+||.||+|..+ ++..||+|++........+.+.+|++++++++||||+++++++...+.
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~---- 79 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR---- 79 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCC----
Confidence 46778899999999999999842 578999999876544445678999999999999999999998865322
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
...++||||+++|+|.+++.+....++|..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||++
T Consensus 80 -~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~ 155 (284)
T cd05081 80 -RNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLT 155 (284)
T ss_pred -CceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCccc
Confidence 237999999999999999976555689999999999999999999998 9999999999999999999999999998
Q ss_pred hhhhccCCcc-----eeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccc---c
Q 004195 635 LLAEARGKGS-----AEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDE---A 706 (769)
Q Consensus 635 ~~~~~~~~~~-----~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~---~ 706 (769)
+......... ......|++||...+..++.++|||||||++|||++|..++.......... +........ .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 234 (284)
T cd05081 156 KVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRM-MGNDKQGQMIVYH 234 (284)
T ss_pred ccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhh-cccccccccchHH
Confidence 7653322110 111223678898888889999999999999999999876654322111100 000000000 0
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 707 RKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 707 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
..+..........+.....++.+++.+||+.+|++|||+.||++.+..+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 235 LIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 0000110000011112234589999999999999999999999988643
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-37 Score=331.71 Aligned_cols=249 Identities=17% Similarity=0.192 Sum_probs=193.3
Q ss_pred CccccCCceeEEEEEeC-CCcEEEEEEccccCC---CChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCCcceEEE
Q 004195 486 SFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK---SSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPSISIIYL 560 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~~~l 560 (769)
+.||+|+||.||+|+.. +++.||||+++.... ...+.+.+|..++.++ +||||+++++++.+.. ..++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~-------~~~l 73 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTES-------RLFF 73 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCC-------EEEE
Confidence 46899999999999976 689999999975422 2234578899999988 6999999999987643 3899
Q ss_pred EEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhc-
Q 004195 561 IFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEA- 639 (769)
Q Consensus 561 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~- 639 (769)
||||+++|+|.+++.+.+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 74 v~e~~~~g~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~ 149 (329)
T cd05588 74 VIEFVSGGDLMFHMQRQR-KLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP 149 (329)
T ss_pred EEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccC
Confidence 999999999999887544 699999999999999999999998 999999999999999999999999999864211
Q ss_pred -cCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchh-----HHHHhhhhhccccccccccccCc
Q 004195 640 -RGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVV-----VLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 640 -~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
.......++..|++||.+.+..++.++|||||||++|||+||+.||+.... .....+....... ...
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 222 (329)
T cd05588 150 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILE-------KQI 222 (329)
T ss_pred CCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHc-------CCC
Confidence 111222345567889999888899999999999999999999999863110 0000111000000 001
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCC------HHHHHHHhHhhh
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPS------VEDTLWNLQFAT 756 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs------~~evl~~l~~~~ 756 (769)
.+....+ ..+.+++.+|++.||++||+ ++++++|+||..
T Consensus 223 ~~p~~~~----~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~ 267 (329)
T cd05588 223 RIPRSLS----VKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRN 267 (329)
T ss_pred CCCCCCC----HHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence 1112223 34889999999999999987 799999999863
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=341.38 Aligned_cols=259 Identities=14% Similarity=0.165 Sum_probs=195.6
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
++|+..+.||+|+||.||+|+.. +++.||+|... ...+.+|++++++++|||||++++++.... ..
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~-------~~ 158 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNK-------FT 158 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECC-------ee
Confidence 57999999999999999999965 68999999754 235788999999999999999999987643 37
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
++|+||+. ++|.+++.... .+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 159 ~lv~e~~~-~~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~ 233 (391)
T PHA03212 159 CLILPRYK-TDLYCYLAAKR-NIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPV 233 (391)
T ss_pred EEEEecCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCcccccc
Confidence 99999995 78988887543 689999999999999999999998 99999999999999999999999999986432
Q ss_pred ccC---CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCch--------hHHHHhhhhhccccccc-
Q 004195 639 ARG---KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENV--------VVLVKDLLQVNIGTDEA- 706 (769)
Q Consensus 639 ~~~---~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~--------~~~~~~~~~~~~~~~~~- 706 (769)
... .....++..|++||.+.+..++.++|||||||++|||+||+.|+.... ...+..++.........
T Consensus 234 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~ 313 (391)
T PHA03212 234 DINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEF 313 (391)
T ss_pred cccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhc
Confidence 211 112234556778999888889999999999999999999997654321 11111111110000000
Q ss_pred -------cccc---------cCccccCCC--CHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 707 -------RKSI---------VDPAVMNEC--SDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 707 -------~~~~---------~d~~~~~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.... ..+...... ......++.+++.+||+.||++|||++|+++|+||..
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~ 381 (391)
T PHA03212 314 PIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQD 381 (391)
T ss_pred CcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhcc
Confidence 0000 001000000 0123456889999999999999999999999999975
|
|
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=320.15 Aligned_cols=248 Identities=18% Similarity=0.279 Sum_probs=196.2
Q ss_pred CCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEE
Q 004195 481 CFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYL 560 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~l 560 (769)
+|...+.||+|+||.||+|+..++..||||.++... ...+++.+|+.++++++||||++++++|.+... .++
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-------~~l 76 (256)
T cd05113 5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRP-------IYI 76 (256)
T ss_pred HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCC-------cEE
Confidence 466778999999999999998777789999987443 345679999999999999999999999875433 799
Q ss_pred EEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhcc
Q 004195 561 IFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEAR 640 (769)
Q Consensus 561 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~ 640 (769)
||||+++|+|.+++......+++..++.++.|++.||+|||+. +++|+||||+||++++++.+||+|||.++.....
T Consensus 77 v~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~ 153 (256)
T cd05113 77 VTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDD 153 (256)
T ss_pred EEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCC
Confidence 9999999999999976544789999999999999999999998 9999999999999999999999999998654332
Q ss_pred CCcc---eeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCcccc
Q 004195 641 GKGS---AEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM 716 (769)
Q Consensus 641 ~~~~---~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 716 (769)
.... ......|.+||......++.++|||||||++|||+| |+.|+...........+.... .+...
T Consensus 154 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~----------~~~~~ 223 (256)
T cd05113 154 EYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGL----------RLYRP 223 (256)
T ss_pred ceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCC----------CCCCC
Confidence 2111 111234677888877889999999999999999999 998986543322222111100 00001
Q ss_pred CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 717 NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 717 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
... ...+.+++.+||+.+|++||++.+++++++
T Consensus 224 ~~~----~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 224 HLA----SEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CCC----CHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 112 245889999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-37 Score=319.37 Aligned_cols=247 Identities=19% Similarity=0.276 Sum_probs=195.9
Q ss_pred CCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEE
Q 004195 481 CFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYL 560 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~l 560 (769)
+|+..+.||+|+||.||+|+.+++..+|+|.+.... ....++.+|++++++++||||+++++++.+.+. .++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~-------~~l 76 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRP-------IFI 76 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCc-------eEE
Confidence 466789999999999999998777889999986432 234678899999999999999999999875433 799
Q ss_pred EEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhcc
Q 004195 561 IFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEAR 640 (769)
Q Consensus 561 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~ 640 (769)
||||+++++|.+++......++|..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 77 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~ 153 (256)
T cd05059 77 VTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDD 153 (256)
T ss_pred EEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceecccc
Confidence 9999999999999975545789999999999999999999998 9999999999999999999999999998654322
Q ss_pred CCcce---eecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCcccc
Q 004195 641 GKGSA---EVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM 716 (769)
Q Consensus 641 ~~~~~---~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 716 (769)
..... .....|.+||...+..++.++|||||||++|||+| |+.||...........+... ..+...
T Consensus 154 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~----------~~~~~~ 223 (256)
T cd05059 154 QYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAG----------YRLYRP 223 (256)
T ss_pred cccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcC----------CcCCCC
Confidence 11111 11124778998888889999999999999999999 78888654332222211110 011111
Q ss_pred CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHh
Q 004195 717 NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNL 752 (769)
Q Consensus 717 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 752 (769)
..+ +.++.+++.+||..+|++|||+.|+++.+
T Consensus 224 ~~~----~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 224 KLA----PTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCC----CHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 122 33489999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-37 Score=324.38 Aligned_cols=268 Identities=18% Similarity=0.298 Sum_probs=198.7
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhc---cCCceeeEeeeeeccCCCCCC
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKL---RHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l---~H~nIv~l~~~~~~~~~~~~~ 554 (769)
+|+..+.||+|+||+||+|+.. +|+.||+|.++..... ....+.+|+++++++ +||||+++++++.+... ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~--~~ 78 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRT--DR 78 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccC--CC
Confidence 4778899999999999999976 6899999998754322 234567788887766 69999999999875332 12
Q ss_pred cceEEEEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 555 ISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
....++||||++ ++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 79 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~ 154 (288)
T cd07863 79 ETKVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGL 154 (288)
T ss_pred CceEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCc
Confidence 346899999997 5888888643 33589999999999999999999999 999999999999999999999999999
Q ss_pred chhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhc-ccccccccc-
Q 004195 634 PLLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVN-IGTDEARKS- 709 (769)
Q Consensus 634 a~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~-~~~~~~~~~- 709 (769)
++....... .....+..|++||.+.+..++.++||||+||++|||++|++||...... ....+.... ......+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd07863 155 ARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRD 234 (288)
T ss_pred cccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccc
Confidence 876543222 1223345678899988888999999999999999999999998654322 222211110 000001100
Q ss_pred ------ccCccc---cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 710 ------IVDPAV---MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 710 ------~~d~~~---~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
...+.. .....++....+.+++.+|++.||++|||+.|++.|+||
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 235 VTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred ccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 000000 001112234458899999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-37 Score=332.12 Aligned_cols=250 Identities=18% Similarity=0.246 Sum_probs=197.2
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhccC-CceeeEeeeeeccCCCCCCc
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRH-SNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H-~nIv~l~~~~~~~~~~~~~~ 555 (769)
+|+..+.||+|+||.||+|+.. +++.||||+++... ....+.+..|++++..++| ++|+++++++.+.+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~------ 74 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD------ 74 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCC------
Confidence 4778899999999999999976 57899999997542 2334567889999999976 56888888886533
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..|+||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 75 -~~~lv~E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~ 149 (324)
T cd05587 75 -RLYFVMEYVNGGDLMYHIQQVG-KFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCK 149 (324)
T ss_pred -EEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcce
Confidence 4899999999999999987554 689999999999999999999998 99999999999999999999999999985
Q ss_pred hhh--ccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCc
Q 004195 636 LAE--ARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 636 ~~~--~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
... ........++..|++||.+.+..++.++|||||||++|||+||+.||...........+.. . .+
T Consensus 150 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~---~--------~~ 218 (324)
T cd05587 150 ENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIME---H--------NV 218 (324)
T ss_pred ecCCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHc---C--------CC
Confidence 422 1111222345678889999888899999999999999999999999976543322221110 0 01
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCH-----HHHHHHhHhhh
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSV-----EDTLWNLQFAT 756 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~~l~~~~ 756 (769)
.+....+ .++.+++.+|+..||++|++. +++++|+|+..
T Consensus 219 ~~~~~~~----~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~ 262 (324)
T cd05587 219 SYPKSLS----KEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRR 262 (324)
T ss_pred CCCCCCC----HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCC
Confidence 1112223 348899999999999999976 89999999754
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-37 Score=331.51 Aligned_cols=248 Identities=21% Similarity=0.273 Sum_probs=195.4
Q ss_pred CCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHH---hhccCCceeeEeeeeeccCCCCCC
Q 004195 482 FDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELI---SKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l---~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
|...+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|++++ ++++||||+++++++.+.+
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~----- 75 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTED----- 75 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCC-----
Confidence 566789999999999999975 68999999997542 22234566676655 5668999999999987643
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
..++||||+++|+|..+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 76 --~~~lv~E~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~ 148 (324)
T cd05589 76 --HVCFVMEYAAGGDLMMHIHTD--VFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLC 148 (324)
T ss_pred --EEEEEEcCCCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCC
Confidence 489999999999999888653 589999999999999999999998 9999999999999999999999999998
Q ss_pred hhhhccC--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccC
Q 004195 635 LLAEARG--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVD 712 (769)
Q Consensus 635 ~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 712 (769)
+...... .....++..|++||.+.+..++.++|||||||++|||++|+.||...........+... .
T Consensus 149 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~-----------~ 217 (324)
T cd05589 149 KEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVND-----------E 217 (324)
T ss_pred ccCCCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-----------C
Confidence 6432211 12233455678899988888999999999999999999999999765433222211110 0
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCcCCCCCCC-----CHHHHHHHhHhhh
Q 004195 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRP-----SVEDTLWNLQFAT 756 (769)
Q Consensus 713 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~~~~ 756 (769)
+......+ ..+.+++.+||+.||++|| ++.++++|+||..
T Consensus 218 ~~~p~~~~----~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~ 262 (324)
T cd05589 218 VRYPRFLS----REAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRD 262 (324)
T ss_pred CCCCCCCC----HHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCC
Confidence 11112233 3478999999999999999 7999999999854
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-38 Score=340.51 Aligned_cols=256 Identities=17% Similarity=0.242 Sum_probs=199.7
Q ss_pred HHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCC
Q 004195 477 EATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD 552 (769)
Q Consensus 477 ~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~ 552 (769)
...++|+..+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+..
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~--- 116 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDK--- 116 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCC---
Confidence 34567899999999999999999976 68999999996432 223345788999999999999999999887643
Q ss_pred CCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCC
Q 004195 553 PSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYN 632 (769)
Q Consensus 553 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFG 632 (769)
..++||||+++|+|.+++... .++...+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 117 ----~~~lv~Ey~~gg~L~~~l~~~--~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG 187 (370)
T cd05596 117 ----YLYMVMEYMPGGDLVNLMSNY--DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFG 187 (370)
T ss_pred ----EEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEecc
Confidence 489999999999999998754 478888889999999999999998 99999999999999999999999999
Q ss_pred CchhhhccCC---cceeecCCCcchhhhccC----CCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccccc
Q 004195 633 LPLLAEARGK---GSAEVSSPAKKTSVLART----EQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTD 704 (769)
Q Consensus 633 la~~~~~~~~---~~~~~~~~~~~pe~~~~~----~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~ 704 (769)
++........ ....++..|++||.+... .++.++|||||||++|||+||++||....... ...+... .
T Consensus 188 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~----~ 263 (370)
T cd05596 188 TCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDH----K 263 (370)
T ss_pred ceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcC----C
Confidence 9865433211 122345567889877543 47899999999999999999999997654322 1221110 0
Q ss_pred cccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCC--CCCHHHHHHHhHhhh
Q 004195 705 EARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKD--RPSVEDTLWNLQFAT 756 (769)
Q Consensus 705 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~l~~~~ 756 (769)
. ....|. .... +..+.+++.+|++.+|++ ||+++|+++|+|+..
T Consensus 264 ~---~~~~~~-~~~~----s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~ 309 (370)
T cd05596 264 N---SLTFPD-DIEI----SKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKN 309 (370)
T ss_pred C---cCCCCC-cCCC----CHHHHHHHHHHccChhhccCCCCHHHHhcCcccCC
Confidence 0 000010 0112 344889999999999998 999999999999864
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-37 Score=329.48 Aligned_cols=245 Identities=19% Similarity=0.267 Sum_probs=191.8
Q ss_pred CccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCCcceEEE
Q 004195 486 SFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPSISIIYL 560 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~~~l 560 (769)
+.||+|+||.||+|+.. +++.||||.++... ....+.+..|..++... +||||+++++++.+.. ..++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~-------~~~l 73 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKE-------HLFF 73 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCC-------EEEE
Confidence 46999999999999975 68899999997542 22334566677777654 8999999999987533 4899
Q ss_pred EEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhcc
Q 004195 561 IFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEAR 640 (769)
Q Consensus 561 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~ 640 (769)
||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 74 v~e~~~gg~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~ 149 (316)
T cd05592 74 VMEYLNGGDLMFHIQSSG-RFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNG 149 (316)
T ss_pred EEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCC
Confidence 999999999999987554 689999999999999999999998 9999999999999999999999999998643221
Q ss_pred C--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccCC
Q 004195 641 G--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNE 718 (769)
Q Consensus 641 ~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 718 (769)
. .....++..|++||.+.+..++.++|||||||++|||++|+.||...........+.. . .+.+...
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~---~--------~~~~~~~ 218 (316)
T cd05592 150 EGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILN---D--------RPHFPRW 218 (316)
T ss_pred CCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHc---C--------CCCCCCC
Confidence 1 1223345678889998888899999999999999999999999976543322221110 0 1111122
Q ss_pred CCHHHHHHHHHHHHHcCcCCCCCCCCHH-HHHHHhHhhh
Q 004195 719 CSDESLKRMMELCLRCLSNEPKDRPSVE-DTLWNLQFAT 756 (769)
Q Consensus 719 ~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl~~l~~~~ 756 (769)
++ .++.+++.+||+.||++||++. ++++|+|+..
T Consensus 219 ~~----~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~ 253 (316)
T cd05592 219 IS----KEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRG 253 (316)
T ss_pred CC----HHHHHHHHHHccCCHHHcCCChHHHHcCcccCC
Confidence 23 3478999999999999999864 7888988754
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=333.67 Aligned_cols=253 Identities=15% Similarity=0.191 Sum_probs=195.9
Q ss_pred CCCCcCccccCCceeEEEEEe----CCCcEEEEEEccccC----CCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCC
Q 004195 481 CFDSSSFMCDASHGQIYKGKL----TDGTLVAIRSLKMSK----KSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLD 551 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~----~~g~~vAvK~~~~~~----~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~ 551 (769)
+|+..+.||+|+||.||+++. .+|+.||+|++.... ....+.+.+|++++.++ +||||+++++++.+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~-- 78 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEA-- 78 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCC--
Confidence 477889999999999999985 258899999997432 12235678899999999 4999999999887533
Q ss_pred CCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCC
Q 004195 552 DPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSY 631 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DF 631 (769)
..++||||+++|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 79 -----~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Df 149 (332)
T cd05614 79 -----KLHLILDYVSGGEMFTHLYQRD-NFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDF 149 (332)
T ss_pred -----EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeC
Confidence 3899999999999999987544 689999999999999999999998 9999999999999999999999999
Q ss_pred CCchhhhccCC---cceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccccccc
Q 004195 632 NLPLLAEARGK---GSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTDEA 706 (769)
Q Consensus 632 Gla~~~~~~~~---~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~~~ 706 (769)
|+++....... ....++..|++||.+.+. .++.++|||||||++|||+||+.||....... ...+......
T Consensus 150 G~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~---- 225 (332)
T cd05614 150 GLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK---- 225 (332)
T ss_pred cCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc----
Confidence 99865422211 122345567889987654 47899999999999999999999986422111 1111110000
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCC-----CHHHHHHHhHhhh
Q 004195 707 RKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRP-----SVEDTLWNLQFAT 756 (769)
Q Consensus 707 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~~~~ 756 (769)
.++.+....++ .+.+++.+|++.||++|| +++++++|+|+..
T Consensus 226 ----~~~~~~~~~~~----~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~ 272 (332)
T cd05614 226 ----CDPPFPSFIGP----EAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKG 272 (332)
T ss_pred ----CCCCCCCCCCH----HHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 12222223333 488999999999999999 8899999999864
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=332.61 Aligned_cols=249 Identities=16% Similarity=0.188 Sum_probs=192.2
Q ss_pred CccccCCceeEEEEEeC-CCcEEEEEEccccCC---CChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCCcceEEE
Q 004195 486 SFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK---SSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPSISIIYL 560 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~~~l 560 (769)
+.||+|+||.||+|+.. +++.||+|.++.... ...+.+.+|+.++.++ +||||+++++++.+.+ ..++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~-------~~~l 73 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES-------RLFF 73 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCC-------EEEE
Confidence 46999999999999976 688999999986422 2234577889888777 7999999999987643 4899
Q ss_pred EEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhcc
Q 004195 561 IFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEAR 640 (769)
Q Consensus 561 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~ 640 (769)
||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 74 v~E~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~ 149 (329)
T cd05618 74 VIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 149 (329)
T ss_pred EEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCC
Confidence 999999999999887544 689999999999999999999998 9999999999999999999999999998643211
Q ss_pred --CCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchh-----HHHHhhhhhccccccccccccCc
Q 004195 641 --GKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVV-----VLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 641 --~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
......++..|++||.+.+..++.++|||||||++|||+||+.||..... ......+...... ...
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~-------~~~ 222 (329)
T cd05618 150 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE-------KQI 222 (329)
T ss_pred CCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhc-------CCC
Confidence 11223345667889999888999999999999999999999999852110 0000000000000 001
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCC------HHHHHHHhHhhh
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPS------VEDTLWNLQFAT 756 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs------~~evl~~l~~~~ 756 (769)
.+ +......+.+++.+||+.||++||+ +.++++|+||..
T Consensus 223 ~~----p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~ 267 (329)
T cd05618 223 RI----PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 267 (329)
T ss_pred CC----CCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence 11 1222334889999999999999998 689999999853
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-37 Score=330.16 Aligned_cols=245 Identities=18% Similarity=0.231 Sum_probs=196.0
Q ss_pred CccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCCcceEEE
Q 004195 486 SFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPSISIIYL 560 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~~~l 560 (769)
+.||+|+||.||+|+.. +++.||||+++... ......+.+|.+++..+ +||||+++++++.+.+ ..++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~-------~~~l 73 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKD-------RLFF 73 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCC-------EEEE
Confidence 46999999999999976 58899999997542 22345677899999888 6999999999987633 4899
Q ss_pred EEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhcc
Q 004195 561 IFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEAR 640 (769)
Q Consensus 561 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~ 640 (769)
||||+++|+|.+++.+.. .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 74 v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 149 (318)
T cd05570 74 VMEYVNGGDLMFHIQRSG-RFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILG 149 (318)
T ss_pred EEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcC
Confidence 999999999999987554 689999999999999999999998 9999999999999999999999999998542211
Q ss_pred --CCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccCC
Q 004195 641 --GKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNE 718 (769)
Q Consensus 641 --~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 718 (769)
......++..|++||.+.+..++.++|||||||++|||+||+.||...........+.. . .+.....
T Consensus 150 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~---~--------~~~~~~~ 218 (318)
T cd05570 150 GVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILE---D--------EVRYPRW 218 (318)
T ss_pred CCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHc---C--------CCCCCCc
Confidence 11222345667889999888999999999999999999999999976543332221110 0 0111112
Q ss_pred CCHHHHHHHHHHHHHcCcCCCCCCCCH-----HHHHHHhHhhh
Q 004195 719 CSDESLKRMMELCLRCLSNEPKDRPSV-----EDTLWNLQFAT 756 (769)
Q Consensus 719 ~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~~l~~~~ 756 (769)
.+ ..+.+++.+||+.||++||++ .++++|+|+..
T Consensus 219 ~~----~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~ 257 (318)
T cd05570 219 LS----KEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFRE 257 (318)
T ss_pred CC----HHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCC
Confidence 23 348899999999999999999 99999999854
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-37 Score=322.64 Aligned_cols=260 Identities=21% Similarity=0.320 Sum_probs=200.6
Q ss_pred HHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCC
Q 004195 477 EATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 477 ~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~ 554 (769)
.+++.|+..+.||+|+||.||+|+.. +++.||+|++.... .....+.+|+.++.++ +||||+++++++......+ .
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~-~ 80 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG-M 80 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCC-C
Confidence 45677888899999999999999975 68899999987543 3456788999999998 6999999999987643211 1
Q ss_pred cceEEEEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 555 ISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
....++||||+++|+|.+++... ...++|..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Dfg~ 157 (272)
T cd06637 81 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGV 157 (272)
T ss_pred CcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccCCC
Confidence 34689999999999999998843 34689999999999999999999998 999999999999999999999999999
Q ss_pred chhhhccC--CcceeecCCCcchhhhc-----cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccc
Q 004195 634 PLLAEARG--KGSAEVSSPAKKTSVLA-----RTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEA 706 (769)
Q Consensus 634 a~~~~~~~--~~~~~~~~~~~~pe~~~-----~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (769)
+....... .....+...|.+||.+. ...++.++|||||||++|||++|+.|+.+............ .
T Consensus 158 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~-----~- 231 (272)
T cd06637 158 SAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR-----N- 231 (272)
T ss_pred ceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhc-----C-
Confidence 86543221 11222344567788765 34578899999999999999999999865432211111100 0
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 707 RKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 707 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
..+.. ........+.+++.+||..+|.+|||++|+++|+||
T Consensus 232 ----~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 232 ----PAPRL---KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred ----CCCCC---CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 00110 011122348899999999999999999999999986
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-37 Score=337.13 Aligned_cols=259 Identities=17% Similarity=0.234 Sum_probs=200.2
Q ss_pred HHHHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeeeeccC
Q 004195 474 ELKEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHCLDFS 549 (769)
Q Consensus 474 el~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~ 549 (769)
++....++|+..+.||+|+||.||+|+.. +++.||+|.+.... ....+.+.+|+.+++.++||||+++++++.+..
T Consensus 37 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~ 116 (370)
T cd05621 37 KLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDK 116 (370)
T ss_pred hcCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC
Confidence 34445678999999999999999999976 68899999986432 223456788999999999999999999987643
Q ss_pred CCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeec
Q 004195 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKIN 629 (769)
Q Consensus 550 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~ 629 (769)
..++||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+
T Consensus 117 -------~~~lv~Ey~~gg~L~~~l~~~--~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~ 184 (370)
T cd05621 117 -------YLYMVMEYMPGGDLVNLMSNY--DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLA 184 (370)
T ss_pred -------EEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEE
Confidence 489999999999999999754 478899999999999999999998 99999999999999999999999
Q ss_pred CCCCchhhhccCC---cceeecCCCcchhhhccC----CCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhcc
Q 004195 630 SYNLPLLAEARGK---GSAEVSSPAKKTSVLART----EQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNI 701 (769)
Q Consensus 630 DFGla~~~~~~~~---~~~~~~~~~~~pe~~~~~----~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~ 701 (769)
|||+++....... ....++..|++||.+.+. .++.++||||+||++|||+||++||....... ...+.....
T Consensus 185 DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~ 264 (370)
T cd05621 185 DFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKN 264 (370)
T ss_pred ecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCc
Confidence 9999876532221 223355678889987653 37899999999999999999999997654322 222111000
Q ss_pred ccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCC--CCCHHHHHHHhHhhh
Q 004195 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKD--RPSVEDTLWNLQFAT 756 (769)
Q Consensus 702 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~l~~~~ 756 (769)
. ..... .......+.+++.+|+..++.+ ||+++|+++|+|+..
T Consensus 265 -------~---~~~p~--~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~ 309 (370)
T cd05621 265 -------S---LNFPE--DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKN 309 (370)
T ss_pred -------c---cCCCC--cccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCC
Confidence 0 00000 0112334788888999865544 899999999999864
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=329.75 Aligned_cols=267 Identities=20% Similarity=0.325 Sum_probs=200.4
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|...+.||+|+||.||+|+.+ +++.||+|.++.... .....+.+|++++++++||||+++++++.+.+ .
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-------~ 78 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDK-------S 78 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCC-------e
Confidence 46888899999999999999976 688999999975432 23356788999999999999999999987643 3
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.++||||+++ +|.+++...+..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 79 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 154 (309)
T cd07872 79 LTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAK 154 (309)
T ss_pred EEEEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceec
Confidence 8999999974 88888876555689999999999999999999998 9999999999999999999999999998654
Q ss_pred hccC--CcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccc--cccccccc-
Q 004195 638 EARG--KGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGT--DEARKSIV- 711 (769)
Q Consensus 638 ~~~~--~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~- 711 (769)
.... ......+..|.+||.+.+ ..++.++|||||||++|||+||++||...........+....+. ...+..+.
T Consensus 155 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (309)
T cd07872 155 SVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISS 234 (309)
T ss_pred CCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcc
Confidence 2221 112233456778887654 46799999999999999999999999764432211111111111 01111110
Q ss_pred --------CccccC----CCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 712 --------DPAVMN----ECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 712 --------d~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.+.... ...+....++.+++.+|++.||++|||++|+++|+|+...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~ 292 (309)
T cd07872 235 NDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSL 292 (309)
T ss_pred hhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhc
Confidence 000000 0001123457899999999999999999999999999754
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-38 Score=324.51 Aligned_cols=244 Identities=27% Similarity=0.486 Sum_probs=185.9
Q ss_pred cCccccCCceeEEEEEeC-----CCcEEEEEEccccCCC-ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 485 SSFMCDASHGQIYKGKLT-----DGTLVAIRSLKMSKKS-SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 485 ~~~iG~G~~g~Vy~~~~~-----~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
.+.||.|.||.||+|.+. .+..|+||.++..... ..+++.+|++.+++++||||++++|+|..... .
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~-------~ 76 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEP-------L 76 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSS-------E
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccc-------c
Confidence 578999999999999976 2578999999653222 25789999999999999999999999985332 8
Q ss_pred EEEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 559 YLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
++||||+++|+|.+++... ...+++.++..|+.||++||+|||+. +++|+||+++||++++++.+||+|||++...
T Consensus 77 ~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~ 153 (259)
T PF07714_consen 77 FLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPI 153 (259)
T ss_dssp EEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEET
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccc
Confidence 9999999999999999855 55799999999999999999999998 9999999999999999999999999998665
Q ss_pred hccC----CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccC
Q 004195 638 EARG----KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVD 712 (769)
Q Consensus 638 ~~~~----~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 712 (769)
.... .........|.+||......++.++||||||+++|||+| |+.|+.......+...+.....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~---------- 223 (259)
T PF07714_consen 154 SEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQR---------- 223 (259)
T ss_dssp TTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEE----------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc----------
Confidence 2111 112223446678998888889999999999999999999 6788765443332222211100
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHh
Q 004195 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNL 752 (769)
Q Consensus 713 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 752 (769)
+.....++. .+.+++.+||+.||++|||+.++++.|
T Consensus 224 ~~~~~~~~~----~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 224 LPIPDNCPK----DIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp TTSBTTSBH----HHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ceeccchhH----HHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 111122333 388999999999999999999999865
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-37 Score=338.60 Aligned_cols=253 Identities=15% Similarity=0.211 Sum_probs=196.3
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|...+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++.+..
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~------ 74 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQ------ 74 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC------
Confidence 46888999999999999999865 78999999986532 122356788999999999999999999998644
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..|+||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 75 -~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~ 149 (377)
T cd05629 75 -YLYLIMEFLPGGDLMTMLIKYD-TFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLST 149 (377)
T ss_pred -eeEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeeccccc
Confidence 3899999999999999997543 688999999999999999999998 99999999999999999999999999985
Q ss_pred hhhccCC-------------------------------------------------cceeecCCCcchhhhccCCCCCCC
Q 004195 636 LAEARGK-------------------------------------------------GSAEVSSPAKKTSVLARTEQDDKS 666 (769)
Q Consensus 636 ~~~~~~~-------------------------------------------------~~~~~~~~~~~pe~~~~~~~~~ks 666 (769)
....... ....++..|++||.+.+..++.++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 229 (377)
T cd05629 150 GFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQEC 229 (377)
T ss_pred ccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCce
Confidence 3211000 011244568889999888899999
Q ss_pred CeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCC---
Q 004195 667 DVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDR--- 742 (769)
Q Consensus 667 DVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~R--- 742 (769)
|||||||++|||+||++||....... ...+.... . .+.-|.. ... ..++.+++.+|+. +|.+|
T Consensus 230 DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~----~---~~~~p~~-~~~----s~~~~dli~~lL~-~~~~r~~r 296 (377)
T cd05629 230 DWWSLGAIMFECLIGWPPFCSENSHETYRKIINWR----E---TLYFPDD-IHL----SVEAEDLIRRLIT-NAENRLGR 296 (377)
T ss_pred eeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccC----C---ccCCCCC-CCC----CHHHHHHHHHHhc-CHhhcCCC
Confidence 99999999999999999997544322 22211110 0 0000100 012 2348889999997 66665
Q ss_pred CCHHHHHHHhHhhh
Q 004195 743 PSVEDTLWNLQFAT 756 (769)
Q Consensus 743 Ps~~evl~~l~~~~ 756 (769)
+++.|+++|+|+..
T Consensus 297 ~~~~~~l~hp~~~~ 310 (377)
T cd05629 297 GGAHEIKSHPFFRG 310 (377)
T ss_pred CCHHHHhcCCCcCC
Confidence 69999999999863
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=344.33 Aligned_cols=261 Identities=16% Similarity=0.233 Sum_probs=204.0
Q ss_pred CCCCcCccccCCceeEEEEEeCCC-cEEEEEEccccCCCChhHHHHHHHHHhhcc-CCceeeEeeeeeccCCCCCCcceE
Q 004195 481 CFDSSSFMCDASHGQIYKGKLTDG-TLVAIRSLKMSKKSSPHMYTYHIELISKLR-HSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~~g-~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
+..+.+.|.+|||+.||.|....+ ..||+|++-..+...-+...+||++|++|+ |+|||.+++........+....++
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Ev 117 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEV 117 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEE
Confidence 345678999999999999997654 999999998776666678999999999997 999999999432222212223568
Q ss_pred EEEEeccCCCchhhhhc-CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 559 YLIFEYAPNETLRSFIS-GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
+|.||||++|.|-|++. +-...|++.++++|+.|+++|+++||. +.|+|||||||-+||||+.+++.||||||.|...
T Consensus 118 llLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~-~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~ 196 (738)
T KOG1989|consen 118 LLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHY-LKPPIIHRDLKIENVLLSADGNYKLCDFGSATTK 196 (738)
T ss_pred EeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc-CCCccchhhhhhhheEEcCCCCEEeCcccccccc
Confidence 99999999999999997 223359999999999999999999997 6889999999999999999999999999998432
Q ss_pred hccC-----------CcceeecCCCcchhhh---ccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccc
Q 004195 638 EARG-----------KGSAEVSSPAKKTSVL---ARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGT 703 (769)
Q Consensus 638 ~~~~-----------~~~~~~~~~~~~pe~~---~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~ 703 (769)
.... .-....+..|++||.+ .+..+++|+||||+||+||-|+....||++.... .++...+..
T Consensus 197 ~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l---aIlng~Y~~ 273 (738)
T KOG1989|consen 197 ILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL---AILNGNYSF 273 (738)
T ss_pred cCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce---eEEeccccC
Confidence 1111 1112345567778854 4667899999999999999999999999865311 111111111
Q ss_pred ccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 704 DEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 704 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
...+.....+.+||..||+.||++||++.+|+.++..+...+
T Consensus 274 --------------P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~ 315 (738)
T KOG1989|consen 274 --------------PPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKP 315 (738)
T ss_pred --------------CCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCC
Confidence 111345666999999999999999999999999998776544
|
|
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-37 Score=319.02 Aligned_cols=251 Identities=18% Similarity=0.303 Sum_probs=198.2
Q ss_pred cCCCCcCccccCCceeEEEEEeC----CCcEEEEEEccccCCC-ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT----DGTLVAIRSLKMSKKS-SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~----~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
++|+..+.||+|+||.||+|++. +...||||.++..... ...+|.+|+.++++++||||+++++++.+...
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~---- 79 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRP---- 79 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCc----
Confidence 56888999999999999999874 2458999998754322 24578899999999999999999999876433
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
.++||||+++++|.+++......+++..+.+++.|++.||+|||+. +|+||||||+||++++++.+|++|||++
T Consensus 80 ---~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~ 153 (266)
T cd05033 80 ---VMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLS 153 (266)
T ss_pred ---eEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchh
Confidence 7999999999999999986555789999999999999999999998 9999999999999999999999999999
Q ss_pred hhhhccCCcc----eeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhcccccccccc
Q 004195 635 LLAEARGKGS----AEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKS 709 (769)
Q Consensus 635 ~~~~~~~~~~----~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (769)
+......... ......|.+||......++.++||||||+++|||++ |..|+...........+.....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~------- 226 (266)
T cd05033 154 RRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYR------- 226 (266)
T ss_pred hcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCC-------
Confidence 7654211111 111234677888888889999999999999999998 9988865443322222211100
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 710 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
.+ ....++ ..+.+++.+||+.+|++||+++|+++++..
T Consensus 227 --~~-~~~~~~----~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~ 264 (266)
T cd05033 227 --LP-PPMDCP----SALYQLMLDCWQKDRNERPTFSQIVSTLDK 264 (266)
T ss_pred --CC-CCCCCC----HHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 01 111223 348899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-37 Score=316.87 Aligned_cols=249 Identities=21% Similarity=0.332 Sum_probs=198.4
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
++|+..+.||+|+||.||+|...++..||+|.+.... ...+.+.+|+.++++++|+||+++++++.+.+. .+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-------~~ 77 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEP-------IY 77 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC-------cE
Confidence 4677889999999999999998888899999987543 235678999999999999999999998875433 79
Q ss_pred EEEeccCCCchhhhhcC-CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 560 LIFEYAPNETLRSFISG-PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
+||||+++|+|.++++. ....+++.++..++.|+++||+|||+. +++||||||+||+++.++.+|++|||++....
T Consensus 78 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~ 154 (261)
T cd05072 78 IITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIE 154 (261)
T ss_pred EEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecC
Confidence 99999999999999973 334689999999999999999999998 99999999999999999999999999997654
Q ss_pred ccCCc---ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCcc
Q 004195 639 ARGKG---SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 639 ~~~~~---~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
..... .......|++||......++.++|||||||++|||+| |+.||...........+.... ...
T Consensus 155 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~----------~~~ 224 (261)
T cd05072 155 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGY----------RMP 224 (261)
T ss_pred CCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCC----------CCC
Confidence 32211 1112235778998888889999999999999999999 899986544332222221110 111
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
....++ .++.+++.+|+..+|++||+++++.+.+.
T Consensus 225 ~~~~~~----~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 259 (261)
T cd05072 225 RMENCP----DELYDIMKTCWKEKAEERPTFDYLQSVLD 259 (261)
T ss_pred CCCCCC----HHHHHHHHHHccCCcccCcCHHHHHHHHh
Confidence 112233 34889999999999999999999998775
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-37 Score=317.48 Aligned_cols=244 Identities=20% Similarity=0.343 Sum_probs=191.6
Q ss_pred CccccCCceeEEEEEeC-CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEEEe
Q 004195 486 SFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFE 563 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV~E 563 (769)
+.||+|+||.||+|+.. +++.||+|.+..... .....+.+|++++++++||||++++++|.+... .++|||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-------~~lv~e 73 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQP-------IYIVME 73 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCC-------eEEEEe
Confidence 46999999999999975 789999998864322 223568999999999999999999999976433 799999
Q ss_pred ccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhccCCc
Q 004195 564 YAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKG 643 (769)
Q Consensus 564 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~ 643 (769)
|+++++|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+|++|||++.........
T Consensus 74 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 150 (252)
T cd05084 74 LVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYA 150 (252)
T ss_pred eccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCccccccccc
Confidence 9999999999976555789999999999999999999998 9999999999999999999999999998654322111
Q ss_pred ce----eecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCccccCC
Q 004195 644 SA----EVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNE 718 (769)
Q Consensus 644 ~~----~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 718 (769)
.. .....|.+||......++.++|||||||++|||++ |.+|+...........+.... .. .
T Consensus 151 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~----------~~----~ 216 (252)
T cd05084 151 STGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGV----------RL----P 216 (252)
T ss_pred ccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCC----------CC----C
Confidence 10 11123677888888889999999999999999998 888886543322222111100 01 1
Q ss_pred CCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 719 CSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 719 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
.+...+..+.+++.+|++.+|++|||+.|+++.+.
T Consensus 217 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 217 CPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 11222345889999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-37 Score=331.10 Aligned_cols=274 Identities=15% Similarity=0.204 Sum_probs=199.6
Q ss_pred cCccccC--CceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 485 SSFMCDA--SHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 485 ~~~iG~G--~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
.++||+| +|++||+++.+ +|+.||+|+++..... ..+.+.+|+++++.++||||++++++|.+.+ ..+
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~-------~~~ 75 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN-------ELW 75 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECC-------EEE
Confidence 5789999 67899999975 7999999999754322 2346778999999999999999999998643 389
Q ss_pred EEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 560 LIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
+||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++|||......
T Consensus 76 lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~ 152 (327)
T cd08227 76 VVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMI 152 (327)
T ss_pred EEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhccc
Confidence 999999999999999642 33589999999999999999999998 99999999999999999999999998653221
Q ss_pred ccCC---------cceeecCCCcchhhhcc--CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccccc--
Q 004195 639 ARGK---------GSAEVSSPAKKTSVLAR--TEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTD-- 704 (769)
Q Consensus 639 ~~~~---------~~~~~~~~~~~pe~~~~--~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~-- 704 (769)
.... .......+|++||.+.+ ..++.++|||||||++|||++|+.||....... ............
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 232 (327)
T cd08227 153 NHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLD 232 (327)
T ss_pred cccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCcccccc
Confidence 1110 11122345788998765 458999999999999999999999997533211 111110000000
Q ss_pred ------ccc-----ccccC-------------c----cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 705 ------EAR-----KSIVD-------------P----AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 705 ------~~~-----~~~~d-------------~----~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
+.. ....+ + .............+.+++.+||+.||++|||++|+++|+||..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~ 312 (327)
T cd08227 233 TTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ 312 (327)
T ss_pred ccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhh
Confidence 000 00000 0 0000111223456889999999999999999999999999987
Q ss_pred hhccccccCccC
Q 004195 757 QIQGLKENNQEA 768 (769)
Q Consensus 757 ~~~~~~~~~~~~ 768 (769)
-.....+..|+.
T Consensus 313 ~~~~~~~~~~~~ 324 (327)
T cd08227 313 IKRRASEALPEL 324 (327)
T ss_pred cchhhhhhhhhh
Confidence 655555555544
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=331.99 Aligned_cols=245 Identities=18% Similarity=0.213 Sum_probs=194.6
Q ss_pred CccccCCceeEEEEEe----CCCcEEEEEEccccCC--CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 486 SFMCDASHGQIYKGKL----TDGTLVAIRSLKMSKK--SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~----~~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
+.||+|+||.||+++. .+|+.||+|+++.... .....+.+|++++++++||||+++++++.+.. ..|
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-------~~~ 74 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEG-------KLY 74 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCC-------EEE
Confidence 5799999999999974 3588999999975422 23345778999999999999999999987643 489
Q ss_pred EEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhc
Q 004195 560 LIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEA 639 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~ 639 (769)
+||||+++|+|.+++.+.. .+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 75 lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~ 150 (318)
T cd05582 75 LILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESID 150 (318)
T ss_pred EEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCC
Confidence 9999999999999997554 689999999999999999999998 999999999999999999999999999865433
Q ss_pred cCC--cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccC
Q 004195 640 RGK--GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMN 717 (769)
Q Consensus 640 ~~~--~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 717 (769)
... ....++..|++||...+..++.++|||||||++|||+||+.||...........+.. . ...+..
T Consensus 151 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~---~--------~~~~p~ 219 (318)
T cd05582 151 HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILK---A--------KLGMPQ 219 (318)
T ss_pred CCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHc---C--------CCCCCC
Confidence 211 122334567889988888889999999999999999999999976543222221110 0 001111
Q ss_pred CCCHHHHHHHHHHHHHcCcCCCCCCCC-----HHHHHHHhHhhh
Q 004195 718 ECSDESLKRMMELCLRCLSNEPKDRPS-----VEDTLWNLQFAT 756 (769)
Q Consensus 718 ~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~l~~~~ 756 (769)
..+ ..+.+++.+||+.||++||+ +.+++.|+|+..
T Consensus 220 ~~~----~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~ 259 (318)
T cd05582 220 FLS----PEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFST 259 (318)
T ss_pred CCC----HHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCC
Confidence 223 34889999999999999999 788999998753
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=324.21 Aligned_cols=257 Identities=20% Similarity=0.283 Sum_probs=201.7
Q ss_pred CCCcCccccCCceeEEEEEeCCCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEE
Q 004195 482 FDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYL 560 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~l 560 (769)
....+.||+|-||.|..+....+..||||.++.... ....+|.+|+++|.+++|||||+++|+|..++. +++
T Consensus 540 L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DeP-------icm 612 (807)
T KOG1094|consen 540 LRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDP-------LCM 612 (807)
T ss_pred eehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCc-------hHH
Confidence 345789999999999999998889999999997643 335789999999999999999999999987554 899
Q ss_pred EEeccCCCchhhhhcCCCCC-CCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhc
Q 004195 561 IFEYAPNETLRSFISGPGYK-LTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEA 639 (769)
Q Consensus 561 V~Ey~~~gsL~~~l~~~~~~-l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~ 639 (769)
|+|||++|+|.+++..+..+ +.-....+|+.||+.|++||.+. ++||||+.++|+|+|.++++||+|||+++-.-.
T Consensus 613 I~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lys 689 (807)
T KOG1094|consen 613 ITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYS 689 (807)
T ss_pred HHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCccccccccc
Confidence 99999999999999865323 35556778999999999999998 999999999999999999999999999974433
Q ss_pred cCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh--CCCCCCCchhHHHHhhhhhccccccccccccCc
Q 004195 640 RGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV--GRPITSENVVVLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 640 ~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt--G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
+.. +.......|+++|.+.-+++|+++|||+|||++||+++ ...|+.+...+.+.+-........ . +
T Consensus 690 g~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~-~------~ 762 (807)
T KOG1094|consen 690 GDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQ-G------R 762 (807)
T ss_pred CCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCC-C------c
Confidence 222 22233456788999889999999999999999999877 568887655443332211111111 0 0
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
......|.-++..+.+++.+||..|.++||+++++..+++..
T Consensus 763 ~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 763 QVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred ceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 111112233344488999999999999999999999888643
|
|
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-37 Score=329.93 Aligned_cols=250 Identities=18% Similarity=0.223 Sum_probs=197.1
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC---CChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCCc
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK---SSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
+|...+.||+|+||.||+|+.. +++.||||.++.... ...+.+..|..++..+ +|++|+++++++.+.+
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~------ 74 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMD------ 74 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCC------
Confidence 4778899999999999999976 688999999975421 2234567788888777 5899999999887643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++
T Consensus 75 -~~~lv~E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~ 149 (323)
T cd05616 75 -RLYFVMEYVNGGDLMYQIQQVG-RFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK 149 (323)
T ss_pred -EEEEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCce
Confidence 4899999999999999987554 689999999999999999999998 99999999999999999999999999986
Q ss_pred hhhccC--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCc
Q 004195 636 LAEARG--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 636 ~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
...... .....++..|++||.+.+..++.++|||||||++|||+||+.||...........+.. . ..
T Consensus 150 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~---~--------~~ 218 (323)
T cd05616 150 ENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME---H--------NV 218 (323)
T ss_pred ecCCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHh---C--------CC
Confidence 432111 1222345567889999888999999999999999999999999976543322221110 0 01
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCC-----HHHHHHHhHhhh
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPS-----VEDTLWNLQFAT 756 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~l~~~~ 756 (769)
...... ..++.+++.+|++.||++|++ ..++.+|+|+..
T Consensus 219 ~~p~~~----s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~ 262 (323)
T cd05616 219 AYPKSM----SKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY 262 (323)
T ss_pred CCCCcC----CHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCC
Confidence 111122 334889999999999999997 489999998753
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-38 Score=327.77 Aligned_cols=250 Identities=21% Similarity=0.293 Sum_probs=206.0
Q ss_pred CCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCCh---hHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 482 FDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSP---HMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~---~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
|+..+.||.|+||.||-|+.. +.++||||++...+++.. .++..|+..|++++|||+|.+.|||.... .
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~-------T 100 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREH-------T 100 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccc-------h
Confidence 555688999999999999954 789999999987766554 46889999999999999999999997532 3
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.|||||||- |+-.|++..+..++.+.++..|+.|.+.||+|||+. +.||||||..|||+.+.|.+|++|||.|.++
T Consensus 101 aWLVMEYCl-GSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~ 176 (948)
T KOG0577|consen 101 AWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIM 176 (948)
T ss_pred HHHHHHHHh-ccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhc
Confidence 799999995 799999886667899999999999999999999999 9999999999999999999999999999776
Q ss_pred hccCCcceeecCCCcchhhhc---cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCcc
Q 004195 638 EARGKGSAEVSSPAKKTSVLA---RTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 638 ~~~~~~~~~~~~~~~~pe~~~---~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
.+. .+..++++|++||++. .+.|+-|+||||+||+..||.-++||............+..+ -.|.
T Consensus 177 ~PA--nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQN----------esPt 244 (948)
T KOG0577|consen 177 APA--NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----------ESPT 244 (948)
T ss_pred Cch--hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhc----------CCCC
Confidence 543 2345667788999864 578999999999999999999999987654333222222110 1122
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
+ ...+++..+..++..|+++-|.+|||.+++++|.+....
T Consensus 245 L---qs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~ 284 (948)
T KOG0577|consen 245 L---QSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRE 284 (948)
T ss_pred C---CCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccC
Confidence 2 245677789999999999999999999999999986544
|
|
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-37 Score=318.39 Aligned_cols=250 Identities=23% Similarity=0.375 Sum_probs=198.9
Q ss_pred hcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
.++|+..+.||+|++|.||+|...+++.||+|.++... ...+++.+|++++++++||||+++++++.... ..
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-------~~ 76 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEE-------PI 76 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCC-------Ce
Confidence 34688889999999999999998778899999987543 34567999999999999999999999987643 37
Q ss_pred EEEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 559 YLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
++||||+++++|.+++... +..++|..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 77 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~ 153 (261)
T cd05068 77 YIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVI 153 (261)
T ss_pred eeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEc
Confidence 9999999999999999743 34689999999999999999999998 9999999999999999999999999998765
Q ss_pred hccCCccee---ecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCc
Q 004195 638 EARGKGSAE---VSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 638 ~~~~~~~~~---~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
......... ....|++||......++.++||||||+++|||+| |+.||...........+.... ..
T Consensus 154 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~----------~~ 223 (261)
T cd05068 154 KEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGY----------RM 223 (261)
T ss_pred cCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC----------CC
Confidence 422211111 1124677888878889999999999999999999 999987644322222111100 00
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
. .+......+.+++.+|++.+|++||+++++++.++
T Consensus 224 ~----~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~ 259 (261)
T cd05068 224 P----CPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLE 259 (261)
T ss_pred C----CCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHh
Confidence 1 11122345889999999999999999999998775
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=348.25 Aligned_cols=250 Identities=15% Similarity=0.161 Sum_probs=198.2
Q ss_pred CCCcCccccCCceeEEEEEeC-C-CcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 482 FDSSSFMCDASHGQIYKGKLT-D-GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~-~-g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
|...+.||+|++|.||+|... + ++.||+|.+..........+.+|+.+++.++|||||+++++|.+.+ ..+
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~-------~~~ 141 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDD-------KLL 141 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECC-------EEE
Confidence 778899999999999999854 4 6789999876544333456788999999999999999999998643 489
Q ss_pred EEEeccCCCchhhhhcC---CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 560 LIFEYAPNETLRSFISG---PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
+||||+++|+|.+++.. ...++++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 142 lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~ 218 (478)
T PTZ00267 142 LIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQ 218 (478)
T ss_pred EEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCcee
Confidence 99999999999988752 234689999999999999999999998 999999999999999999999999999976
Q ss_pred hhccC----CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccC
Q 004195 637 AEARG----KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVD 712 (769)
Q Consensus 637 ~~~~~----~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 712 (769)
..... .....++..|++||.+.+..++.++|||||||++|||+||+.||...........+.. .. .+
T Consensus 219 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~--~~-------~~ 289 (478)
T PTZ00267 219 YSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLY--GK-------YD 289 (478)
T ss_pred cCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--CC-------CC
Confidence 53322 1122345568889998888899999999999999999999999875443222111110 00 00
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 713 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
+ ....++ ..+.+++.+||+.||++||++++++.+.++.
T Consensus 290 ~-~~~~~s----~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~ 327 (478)
T PTZ00267 290 P-FPCPVS----SGMKALLDPLLSKNPALRPTTQQLLHTEFLK 327 (478)
T ss_pred C-CCccCC----HHHHHHHHHHhccChhhCcCHHHHHhCHHHH
Confidence 1 111222 3488999999999999999999999987764
|
|
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-37 Score=338.15 Aligned_cols=253 Identities=17% Similarity=0.205 Sum_probs=196.7
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
+|+..+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++.+.+.+
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~------- 74 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKD------- 74 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-------
Confidence 6888999999999999999965 68999999996532 223456889999999999999999999987643
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++||||+++|+|.+++.+.+ .+++.....++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++..
T Consensus 75 ~~~lv~E~~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~ 150 (376)
T cd05598 75 NLYFVMDYIPGGDMMSLLIRLG-IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTG 150 (376)
T ss_pred EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCcc
Confidence 4899999999999999998654 688888999999999999999998 999999999999999999999999999742
Q ss_pred hhcc---------------------------------------------CCcceeecCCCcchhhhccCCCCCCCCeeeh
Q 004195 637 AEAR---------------------------------------------GKGSAEVSSPAKKTSVLARTEQDDKSDVYDI 671 (769)
Q Consensus 637 ~~~~---------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~ 671 (769)
.... ......++..|++||.+.+..++.++|||||
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 230 (376)
T cd05598 151 FRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSV 230 (376)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeec
Confidence 2100 0001234556788999988889999999999
Q ss_pred hHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCC---CHHHH
Q 004195 672 GIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRP---SVEDT 748 (769)
Q Consensus 672 Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP---s~~ev 748 (769)
||++|||+||+.||...........+.. ... ....+. ....++ .+.+++.+|+ .+|.+|+ ++.|+
T Consensus 231 Gvilyell~G~~Pf~~~~~~~~~~~i~~-~~~-----~~~~~~-~~~~s~----~~~~li~~l~-~~p~~R~~~~t~~el 298 (376)
T cd05598 231 GVILYEMLVGQPPFLADTPAETQLKVIN-WET-----TLHIPS-QAKLSR----EASDLILRLC-CGAEDRLGKNGADEI 298 (376)
T ss_pred cceeeehhhCCCCCCCCCHHHHHHHHhc-cCc-----cccCCC-CCCCCH----HHHHHHHHHh-cCHhhcCCCCCHHHH
Confidence 9999999999999976543222111110 000 000010 112233 3677887876 5999999 99999
Q ss_pred HHHhHhhh
Q 004195 749 LWNLQFAT 756 (769)
Q Consensus 749 l~~l~~~~ 756 (769)
++|+|+..
T Consensus 299 l~h~~~~~ 306 (376)
T cd05598 299 KAHPFFKG 306 (376)
T ss_pred hCCCCcCC
Confidence 99999864
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=318.74 Aligned_cols=252 Identities=18% Similarity=0.269 Sum_probs=195.5
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCc----EEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGT----LVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~----~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
+|...+.||+|+||+||+|++. +|+ .||+|.+..... ....++..|+.++++++||||+++++++...
T Consensus 8 ~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~------ 81 (279)
T cd05111 8 ELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGA------ 81 (279)
T ss_pred hceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCC------
Confidence 5677899999999999999964 454 478888754322 1235677888899999999999999987532
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
..++++||+++|+|.+++......++|..+..++.|+++||+|||+. +++||||||+||++++++.+|++|||++
T Consensus 82 --~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~ 156 (279)
T cd05111 82 --SLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVA 156 (279)
T ss_pred --ccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccc
Confidence 26899999999999999986555799999999999999999999998 9999999999999999999999999999
Q ss_pred hhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhcccccccccc
Q 004195 635 LLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKS 709 (769)
Q Consensus 635 ~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (769)
+....... ........|++||......++.++|||||||++||++| |+.|+.+........++.....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~------- 229 (279)
T cd05111 157 DLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGER------- 229 (279)
T ss_pred eeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCc-------
Confidence 75432211 11112235678898888889999999999999999998 9999876544333333321100
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 710 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
...+ ..++ ..+.+++.+||..||++|||+.|+++.+....+
T Consensus 230 ~~~~---~~~~----~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 230 LAQP---QICT----IDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred CCCC---CCCC----HHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 0111 1122 237889999999999999999999998876554
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-37 Score=329.87 Aligned_cols=245 Identities=17% Similarity=0.203 Sum_probs=191.1
Q ss_pred CccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHH-HHhhccCCceeeEeeeeeccCCCCCCcceEEE
Q 004195 486 SFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIE-LISKLRHSNLVSALGHCLDFSLDDPSISIIYL 560 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~-~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~l 560 (769)
+.||+|+||+||+|+.. +|+.||||++.... ......+.+|.. +++.++||||+++++++.+.+ ..++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~-------~~~l 73 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTAD-------KLYF 73 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCC-------EEEE
Confidence 46999999999999976 79999999997542 122234555555 467899999999999887643 4899
Q ss_pred EEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhcc
Q 004195 561 IFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEAR 640 (769)
Q Consensus 561 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~ 640 (769)
||||+++|+|.+++.+.. .+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 74 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~ 149 (323)
T cd05575 74 VLDYVNGGELFFHLQRER-SFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH 149 (323)
T ss_pred EEcCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccC
Confidence 999999999999987554 689999999999999999999998 9999999999999999999999999998643221
Q ss_pred C--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccCC
Q 004195 641 G--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNE 718 (769)
Q Consensus 641 ~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 718 (769)
. .....++..|++||.+.+..++.++|||||||++|||++|++||...........+.. . ...+...
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~---~--------~~~~~~~ 218 (323)
T cd05575 150 SKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILN---K--------PLRLKPN 218 (323)
T ss_pred CCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHc---C--------CCCCCCC
Confidence 1 1222345567889998888899999999999999999999999976543222111110 0 0111122
Q ss_pred CCHHHHHHHHHHHHHcCcCCCCCCCCH----HHHHHHhHhhh
Q 004195 719 CSDESLKRMMELCLRCLSNEPKDRPSV----EDTLWNLQFAT 756 (769)
Q Consensus 719 ~~~~~~~~l~~li~~cl~~dP~~RPs~----~evl~~l~~~~ 756 (769)
.+ ..+.+++.+|++.||++||++ .|+++|+|+..
T Consensus 219 ~~----~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~ 256 (323)
T cd05575 219 IS----VSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSS 256 (323)
T ss_pred CC----HHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCC
Confidence 23 348899999999999999987 69999999753
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-37 Score=323.82 Aligned_cols=254 Identities=17% Similarity=0.282 Sum_probs=202.6
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
.+|+..+.||+|+||.||+|+.. +++.||+|.+........+.+.+|+.+++.++||||+++++++.+.. ..
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~-------~~ 92 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD-------EL 92 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCC-------EE
Confidence 36778899999999999999964 68999999998665555677899999999999999999999987633 48
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
++||||+++++|.+++... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 93 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~ 167 (296)
T cd06654 93 WVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167 (296)
T ss_pred EEeecccCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhcc
Confidence 9999999999999998753 589999999999999999999998 99999999999999999999999999986543
Q ss_pred ccCC--cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCcccc
Q 004195 639 ARGK--GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM 716 (769)
Q Consensus 639 ~~~~--~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 716 (769)
.... ........|.+||...+..++.++|||||||++|||++|++||......... ..... .. .+..
T Consensus 168 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~--~~~~~-~~-------~~~~- 236 (296)
T cd06654 168 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL--YLIAT-NG-------TPEL- 236 (296)
T ss_pred ccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhH--HHHhc-CC-------CCCC-
Confidence 2211 1223345677899888888899999999999999999999999754322111 11000 00 0000
Q ss_pred CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 717 NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 717 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
..+......+.+++.+||..+|++||++.|+++|+|+...
T Consensus 237 -~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~ 276 (296)
T cd06654 237 -QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIA 276 (296)
T ss_pred -CCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhcc
Confidence 1112233458899999999999999999999999998654
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-37 Score=339.22 Aligned_cols=252 Identities=17% Similarity=0.226 Sum_probs=194.9
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC---CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK---SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
.|+..+.||+|+||.||+|+.. +++.||+|++..... .....+.+|++++++++|||||++++++.+.+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~------- 74 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKD------- 74 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCC-------
Confidence 5788899999999999999965 689999999975422 22356888999999999999999999998643
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++|||||++|+|.+++.+.+ .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++..
T Consensus 75 ~~~lv~E~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~ 150 (382)
T cd05625 75 NLYFVMDYIPGGDMMSLLIRMG-IFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTG 150 (382)
T ss_pred EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCcc
Confidence 4899999999999999997554 688889999999999999999998 999999999999999999999999999742
Q ss_pred hhccC-------------------------------------------------CcceeecCCCcchhhhccCCCCCCCC
Q 004195 637 AEARG-------------------------------------------------KGSAEVSSPAKKTSVLARTEQDDKSD 667 (769)
Q Consensus 637 ~~~~~-------------------------------------------------~~~~~~~~~~~~pe~~~~~~~~~ksD 667 (769)
..... .....++..|++||.+.+..++.++|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~D 230 (382)
T cd05625 151 FRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCD 230 (382)
T ss_pred ccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeee
Confidence 21000 00112445678899998889999999
Q ss_pred eeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCC--
Q 004195 668 VYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPS-- 744 (769)
Q Consensus 668 VwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-- 744 (769)
||||||++|||+||++||....... ......... ....|. ....++ ++.+++.+++ .+|++|++
T Consensus 231 iwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~-------~~~~p~-~~~~s~----~~~~li~~l~-~~p~~R~~~~ 297 (382)
T cd05625 231 WWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQT-------SLHIPP-QAKLSP----EASDLIIKLC-RGPEDRLGKN 297 (382)
T ss_pred EEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCC-------CcCCCC-cccCCH----HHHHHHHHHc-cCHhHcCCCC
Confidence 9999999999999999997643321 111111000 000010 012233 3677777765 59999997
Q ss_pred -HHHHHHHhHhhh
Q 004195 745 -VEDTLWNLQFAT 756 (769)
Q Consensus 745 -~~evl~~l~~~~ 756 (769)
++|+++|+||..
T Consensus 298 ~~~ei~~hp~f~~ 310 (382)
T cd05625 298 GADEIKAHPFFKT 310 (382)
T ss_pred CHHHHhcCCCcCC
Confidence 999999999854
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-37 Score=318.37 Aligned_cols=248 Identities=22% Similarity=0.322 Sum_probs=196.9
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
+|+..+.||+|+||.||+|... +++.||+|.+... ....+++.+|++++++++||||++++++|..... .+
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-------~~ 78 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP-------FY 78 (263)
T ss_pred HeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCC-------cE
Confidence 4677889999999999999975 5889999998743 2334678999999999999999999999876433 79
Q ss_pred EEEeccCCCchhhhhcC-CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 560 LIFEYAPNETLRSFISG-PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
+||||+++++|.+++.. ....+++..+..++.|+++||+|||+. +++||||||+||++++++.+||+|||++....
T Consensus 79 lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~ 155 (263)
T cd05052 79 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT 155 (263)
T ss_pred EEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCccccccc
Confidence 99999999999999874 334689999999999999999999998 99999999999999999999999999986654
Q ss_pred ccCCcc---eeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCcc
Q 004195 639 ARGKGS---AEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 639 ~~~~~~---~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
...... ......|.+||...+..++.++|||||||++|||+| |..|+...........+... ..+.
T Consensus 156 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~----------~~~~ 225 (263)
T cd05052 156 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKG----------YRME 225 (263)
T ss_pred cceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC----------CCCC
Confidence 322111 111234778998888889999999999999999998 88888754433222211110 0111
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
....++ ..+.+++.+||+.+|++||++.|+++.+.
T Consensus 226 ~~~~~~----~~~~~li~~cl~~~p~~Rp~~~~l~~~l~ 260 (263)
T cd05052 226 RPEGCP----PKVYELMRACWQWNPSDRPSFAEIHQAFE 260 (263)
T ss_pred CCCCCC----HHHHHHHHHHccCCcccCCCHHHHHHHHH
Confidence 112233 44889999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-37 Score=337.70 Aligned_cols=269 Identities=20% Similarity=0.308 Sum_probs=199.3
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC--CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK--SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
+|+..+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|+++++.++||||+++++++...... ....
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--~~~~ 78 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHID--PFEE 78 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCcc--ccce
Confidence 4788899999999999999965 799999999864322 2335788999999999999999999998764321 1235
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.++||||+. ++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 79 ~~lv~e~~~-~~l~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~ 153 (372)
T cd07853 79 IYVVTELMQ-SDLHKIIVSPQ-PLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARVE 153 (372)
T ss_pred EEEEeeccc-cCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceeec
Confidence 899999996 58888886544 689999999999999999999998 9999999999999999999999999998654
Q ss_pred hccCC---cceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccc--cc----
Q 004195 638 EARGK---GSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDE--AR---- 707 (769)
Q Consensus 638 ~~~~~---~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~--~~---- 707 (769)
..... .....+..|++||.+.+. .++.++|||||||++|||++|++||...........+....+... ..
T Consensus 154 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 233 (372)
T cd07853 154 EPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSAC 233 (372)
T ss_pred ccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhh
Confidence 32211 112234567889987664 479999999999999999999999976432221111111111000 00
Q ss_pred ---cc-c----cCcccc---CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 708 ---KS-I----VDPAVM---NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 708 ---~~-~----~d~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.. + ..+... .....+...++.+++.+|++.||++|||+.|+++|+|+..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 293 (372)
T cd07853 234 EGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDE 293 (372)
T ss_pred HHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCC
Confidence 00 0 000000 0011112345889999999999999999999999999875
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-37 Score=325.11 Aligned_cols=253 Identities=17% Similarity=0.278 Sum_probs=209.3
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
++|...+.+|+|+||.++.++.+ ++..+|+|.+....... .+....|+.++++++|||||.+.+.+.+++ .
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~------~ 77 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDG------Q 77 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCC------c
Confidence 56788899999999999999976 68899999998765433 346788999999999999999999988633 2
Q ss_pred eEEEEEeccCCCchhhhhcC-CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 557 IIYLIFEYAPNETLRSFISG-PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..+|||+||+||++.+.+.+ .+..+++..+.+++.|++.|+.|||+. .|+|||||+.||++..+..+|++|||+|+
T Consensus 78 ~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK 154 (426)
T KOG0589|consen 78 LLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAK 154 (426)
T ss_pred eEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhh
Confidence 38999999999999999983 346789999999999999999999988 99999999999999999999999999998
Q ss_pred hhhccC-C-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhccccccccccccC
Q 004195 636 LAEARG-K-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIGTDEARKSIVD 712 (769)
Q Consensus 636 ~~~~~~-~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~d 712 (769)
...... . .+..++..|+.||...+.+|+.|+||||+||++|||++-+++|...... .+.++.+.. .
T Consensus 155 ~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~----------~- 223 (426)
T KOG0589|consen 155 ILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGL----------Y- 223 (426)
T ss_pred hcCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhcc----------C-
Confidence 876654 3 3344555666799999999999999999999999999999999875543 233322211 1
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 713 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
...+.....++..++..|+..+|+.||++.+++.++....
T Consensus 224 ----~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~~ 263 (426)
T KOG0589|consen 224 ----SPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLLR 263 (426)
T ss_pred ----CCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhhh
Confidence 1223334455899999999999999999999999977653
|
|
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-37 Score=322.12 Aligned_cols=262 Identities=21% Similarity=0.300 Sum_probs=196.1
Q ss_pred CCcCccccCCceeEEEEEe-----CCCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 483 DSSSFMCDASHGQIYKGKL-----TDGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 483 ~~~~~iG~G~~g~Vy~~~~-----~~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
...+.||+|+||+||++.. .++..||+|.++.... ...+.+.+|++++++++||||++++++|.... ..
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~ 81 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQG-----GK 81 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC-----Cc
Confidence 7789999999999988653 3578999999975432 23467889999999999999999999886532 23
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++||||+++|+|.+++... .+++.++..++.|+++||+|||+. +|+||||||+||++++++.+|++|||+++.
T Consensus 82 ~~~lv~e~~~~~~l~~~~~~~--~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~ 156 (283)
T cd05080 82 GLQLIMEYVPLGSLRDYLPKH--KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKA 156 (283)
T ss_pred eEEEEecCCCCCCHHHHHHHc--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecccccc
Confidence 479999999999999999754 489999999999999999999998 999999999999999999999999999875
Q ss_pred hhccCC-----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccc--ccccccc
Q 004195 637 AEARGK-----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIG--TDEARKS 709 (769)
Q Consensus 637 ~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~--~~~~~~~ 709 (769)
...... ........|++||......++.++|||||||++|||+||+.|+...... +......... ......+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~ 235 (283)
T cd05080 157 VPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKK-FEEMIGPKQGQMTVVRLIE 235 (283)
T ss_pred cCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcch-hhhhhcccccccchhhhhh
Confidence 533221 1111223467888887788999999999999999999999887543211 1111110000 0001111
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 710 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
..+.......+...+.++.+++.+||+.+|++|||++++++.+..+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~ 281 (283)
T cd05080 236 LLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM 281 (283)
T ss_pred hhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence 1111111112223345599999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-37 Score=347.40 Aligned_cols=265 Identities=18% Similarity=0.204 Sum_probs=205.6
Q ss_pred HHHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCC
Q 004195 475 LKEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLD 551 (769)
Q Consensus 475 l~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~ 551 (769)
.....++|...+.||+|+||+||+|+.. +|+.||||++...... ....+.+|+.++..++|+||+++++.+...+..
T Consensus 27 ~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~ 106 (496)
T PTZ00283 27 AKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPR 106 (496)
T ss_pred ccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceeccccc
Confidence 3445578999999999999999999864 7999999999754322 234678899999999999999998877543322
Q ss_pred CC-CcceEEEEEeccCCCchhhhhcC---CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceee
Q 004195 552 DP-SISIIYLIFEYAPNETLRSFISG---PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVK 627 (769)
Q Consensus 552 ~~-~~~~~~lV~Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~k 627 (769)
.+ .....++||||+++|+|.++++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+|
T Consensus 107 ~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vk 183 (496)
T PTZ00283 107 NPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVK 183 (496)
T ss_pred CcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEE
Confidence 11 12346899999999999999863 234689999999999999999999998 999999999999999999999
Q ss_pred ecCCCCchhhhccC----CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccc
Q 004195 628 INSYNLPLLAEARG----KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGT 703 (769)
Q Consensus 628 l~DFGla~~~~~~~----~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~ 703 (769)
|+|||+++...... .....++..|++||.+.+..++.++|||||||++|||++|+.||............. ..
T Consensus 184 L~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~---~~ 260 (496)
T PTZ00283 184 LGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTL---AG 260 (496)
T ss_pred EEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHh---cC
Confidence 99999986543221 122234556888999988889999999999999999999999997654322211110 00
Q ss_pred ccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 704 DEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 704 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
..+ .+...++ .++.+++.+||+.||++||++.++++|+++..
T Consensus 261 ------~~~-~~~~~~~----~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~ 302 (496)
T PTZ00283 261 ------RYD-PLPPSIS----PEMQEIVTALLSSDPKRRPSSSKLLNMPICKL 302 (496)
T ss_pred ------CCC-CCCCCCC----HHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence 001 1112233 34889999999999999999999999988654
|
|
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-39 Score=310.32 Aligned_cols=249 Identities=17% Similarity=0.258 Sum_probs=207.6
Q ss_pred CCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEE
Q 004195 482 FDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYL 560 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~l 560 (769)
|.+.+.+|+|+||.||||.++ .|.+||||.+... .+-+++.+|+.||++.+.|++|++||.|..... +++
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sD-------LWI 105 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSD-------LWI 105 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCc-------eEe
Confidence 445689999999999999976 7999999999754 456789999999999999999999998875433 899
Q ss_pred EEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhcc
Q 004195 561 IFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEAR 640 (769)
Q Consensus 561 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~ 640 (769)
|||||..|+..+.++-...+|++.++..+.+..++||+|||.. .-||||||..|||++.+|.+|++|||.|-...+.
T Consensus 106 VMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDT 182 (502)
T KOG0574|consen 106 VMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDT 182 (502)
T ss_pred ehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhh
Confidence 9999999999999996667899999999999999999999998 8899999999999999999999999998544322
Q ss_pred --CCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccCC
Q 004195 641 --GKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNE 718 (769)
Q Consensus 641 --~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 718 (769)
...+..+++.|++||++..-.|++++||||+|++..||..|+||+.+-..... .+..+ -.|...-.
T Consensus 183 MAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRA------IFMIP------T~PPPTF~ 250 (502)
T KOG0574|consen 183 MAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRA------IFMIP------TKPPPTFK 250 (502)
T ss_pred HHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccce------eEecc------CCCCCCCC
Confidence 23445566778999999999999999999999999999999999975432211 00000 01111112
Q ss_pred CCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 719 CSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 719 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
-+++++.++-+++++|+.+.|++|-|+-++++|++.
T Consensus 251 KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~Fi 286 (502)
T KOG0574|consen 251 KPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFI 286 (502)
T ss_pred ChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhh
Confidence 356778889999999999999999999999999985
|
|
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-37 Score=321.87 Aligned_cols=249 Identities=23% Similarity=0.368 Sum_probs=195.6
Q ss_pred CCCCcCccccCCceeEEEEEeCC-C-----cEEEEEEccccCCC-ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 481 CFDSSSFMCDASHGQIYKGKLTD-G-----TLVAIRSLKMSKKS-SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~~-g-----~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
+|+..+.||+|+||.||+|.... + ..||+|.++..... ....+.+|++++++++||||+++++++.+...
T Consensus 6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~--- 82 (283)
T cd05048 6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQP--- 82 (283)
T ss_pred HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCc---
Confidence 57778999999999999998642 2 57999998754322 23568899999999999999999999875433
Q ss_pred CcceEEEEEeccCCCchhhhhcCCC---------------CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccce
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPG---------------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDV 618 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NI 618 (769)
.+++|||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +++||||||+||
T Consensus 83 ----~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Ni 155 (283)
T cd05048 83 ----TCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNC 155 (283)
T ss_pred ----eEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceE
Confidence 799999999999999986321 3588999999999999999999998 999999999999
Q ss_pred eeCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHH
Q 004195 619 LLDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLV 693 (769)
Q Consensus 619 Lld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~ 693 (769)
++++++.+||+|||+++....... ........|++||......++.++|||||||++|||+| |+.||........
T Consensus 156 l~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~ 235 (283)
T cd05048 156 LVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEV 235 (283)
T ss_pred EEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence 999999999999999865422211 11122345788998888889999999999999999998 9989875443333
Q ss_pred HhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 694 KDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
...+.... .+ ..+...+.++.+++.+||+.||++||+++||++++.
T Consensus 236 ~~~i~~~~----------~~----~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05048 236 IEMIRSRQ----------LL----PCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLR 281 (283)
T ss_pred HHHHHcCC----------cC----CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHh
Confidence 22221100 01 112223345899999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-37 Score=319.04 Aligned_cols=252 Identities=21% Similarity=0.344 Sum_probs=201.4
Q ss_pred HhcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
+..+|+..+.||+|+||.||+|+..++..+|+|.+.........++.+|+.++++++||||+++++++.+...
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~------- 76 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEP------- 76 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCC-------
Confidence 3456888899999999999999988899999999986655456789999999999999999999999876443
Q ss_pred EEEEEeccCCCchhhhhcC-CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 558 IYLIFEYAPNETLRSFISG-PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
.++||||+++|+|.+++.. .+..+++..+.+++.|+++||+|||+. +|+||||||+||++++++.+||+|||.+..
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~ 153 (261)
T cd05148 77 VYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARL 153 (261)
T ss_pred eEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhh
Confidence 8999999999999999974 334689999999999999999999998 999999999999999999999999999865
Q ss_pred hhccCCcce--eecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCc
Q 004195 637 AEARGKGSA--EVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 637 ~~~~~~~~~--~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
......... .....+.+||......++.++||||||+++|||++ |+.|+............... ..+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~----------~~~ 223 (261)
T cd05148 154 IKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAG----------YRM 223 (261)
T ss_pred cCCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhC----------CcC
Confidence 533221111 11224677888888889999999999999999999 88888654432222211110 011
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
.....++ ..+.+++.+||+.||++|||++++++.|+
T Consensus 224 ~~~~~~~----~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~ 259 (261)
T cd05148 224 PCPAKCP----QEIYKIMLECWAAEPEDRPSFKALREELD 259 (261)
T ss_pred CCCCCCC----HHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 1112223 34889999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-37 Score=330.94 Aligned_cols=251 Identities=20% Similarity=0.268 Sum_probs=208.0
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~ 553 (769)
.++|...++||+|.||.|+.+..+ +++.+|||.+++.. .++.+....|.+|+... +||.++.++.+|.+.+
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~---- 442 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE---- 442 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCC----
Confidence 457888999999999999999987 68999999999764 34456788898888777 5999999999998744
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
++|.||||+.|||+..+.+.. .+++....-||..|+.||+|||++ +||+||||.+|||+|.+|.+||+|||+
T Consensus 443 ---~l~fvmey~~Ggdm~~~~~~~--~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGl 514 (694)
T KOG0694|consen 443 ---HLFFVMEYVAGGDLMHHIHTD--VFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGL 514 (694)
T ss_pred ---eEEEEEEecCCCcEEEEEecc--cccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEeccccc
Confidence 599999999999966555533 699999999999999999999999 999999999999999999999999999
Q ss_pred chhhh--ccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccccccccccc
Q 004195 634 PLLAE--ARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTDEARKSI 710 (769)
Q Consensus 634 a~~~~--~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~ 710 (769)
++... ....++.+++.-|++||++....|+..+|.|||||+||||++|.+||.++..+. +..++..
T Consensus 515 cKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d----------- 583 (694)
T KOG0694|consen 515 CKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVND----------- 583 (694)
T ss_pred ccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcC-----------
Confidence 96532 334456677788899999999999999999999999999999999998655443 3333221
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCC-----HHHHHHHhHhhhh
Q 004195 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPS-----VEDTLWNLQFATQ 757 (769)
Q Consensus 711 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~l~~~~~ 757 (769)
|+. +|-..+.+...++.+++.++|++|.- +++|.+|++|...
T Consensus 584 -~~~----yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i 630 (694)
T KOG0694|consen 584 -EVR----YPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSI 630 (694)
T ss_pred -CCC----CCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccC
Confidence 121 23334455889999999999999974 5889999998654
|
|
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-37 Score=318.57 Aligned_cols=253 Identities=19% Similarity=0.284 Sum_probs=195.7
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
++|+..+.||+|+||.||+|+.. +++.||+|++..........+.+|+.++++++||||+++++++.... ..
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~-------~~ 81 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSRE-------KL 81 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC-------EE
Confidence 46888999999999999999964 78999999997654444567889999999999999999999987633 48
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
++||||+++++|.++++... .+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||++....
T Consensus 82 ~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06646 82 WICMEYCGGGSLQDIYHVTG-PLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKIT 157 (267)
T ss_pred EEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeec
Confidence 99999999999999987544 689999999999999999999998 99999999999999999999999999986543
Q ss_pred ccCC--cceeecCCCcchhhhc---cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCc
Q 004195 639 ARGK--GSAEVSSPAKKTSVLA---RTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 639 ~~~~--~~~~~~~~~~~pe~~~---~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
.... ........|++||.+. ...++.++|||||||++|||++|++|+.......... . .... ....+
T Consensus 158 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~--~--~~~~----~~~~~ 229 (267)
T cd06646 158 ATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF--L--MSKS----NFQPP 229 (267)
T ss_pred ccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe--e--eecC----CCCCC
Confidence 2211 1122334567788763 3457889999999999999999999885432111000 0 0000 00011
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
.... .......+.+++.+||+.+|++||+++++++|+|
T Consensus 230 ~~~~--~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 230 KLKD--KTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred CCcc--ccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 1100 1122345889999999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-37 Score=317.81 Aligned_cols=251 Identities=18% Similarity=0.294 Sum_probs=198.4
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC-----ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS-----SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
++|+..+.||+|++|.||+|... +++.||+|.+...... ....+.+|++++++++||||+++++++.+..
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---- 77 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDE---- 77 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCC----
Confidence 57889999999999999999965 6899999998754221 1246888999999999999999999997643
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
..++||||+++++|.+++...+ .+++..+.+++.|++.||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 78 ---~~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~ 150 (263)
T cd06625 78 ---TLSIFMEYMPGGSVKDQLKAYG-ALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGA 150 (263)
T ss_pred ---eEEEEEEECCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeccc
Confidence 4899999999999999997554 688999999999999999999998 999999999999999999999999999
Q ss_pred chhhhccCC-----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccc
Q 004195 634 PLLAEARGK-----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARK 708 (769)
Q Consensus 634 a~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (769)
++....... ........|.+||...+..++.++|||||||++|||++|+.||............. ...
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~----~~~--- 223 (263)
T cd06625 151 SKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIA----TQP--- 223 (263)
T ss_pred ceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHh----ccC---
Confidence 864432111 11223345778998888889999999999999999999999986543221111000 000
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
..+.+...+ ...+.+++.+||..+|++|||+.|+++|+||
T Consensus 224 --~~~~~~~~~----~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 224 --TNPQLPSHV----SPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred --CCCCCCccC----CHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 011111222 3348899999999999999999999999986
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-37 Score=323.53 Aligned_cols=253 Identities=15% Similarity=0.231 Sum_probs=196.4
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|+..+.||+|+||.||+|+.. +++.||+|.+..... ...+++.+|++++++++||||++++++|.+.. .
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-------~ 73 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVEN-------R 73 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECC-------E
Confidence 35777899999999999999964 789999999865422 22356889999999999999999999998643 3
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.++||||+++++|..+. .+++..+..++.|++.||+|||+. +|+|+||||+||+++.++.+||+|||++...
T Consensus 74 ~~lv~e~~~~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~ 145 (279)
T cd06619 74 ISICTEFMDGGSLDVYR-----KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQL 145 (279)
T ss_pred EEEEEecCCCCChHHhh-----cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceec
Confidence 79999999999997653 468888999999999999999998 9999999999999999999999999998655
Q ss_pred hccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH----HHhhhhhccccccccccccCc
Q 004195 638 EARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL----VKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 638 ~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~d~ 713 (769)
..........+..|.+||...+..++.++|||||||++|||+||+.||....... ......... ....+
T Consensus 146 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-------~~~~~ 218 (279)
T cd06619 146 VNSIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIV-------DEDPP 218 (279)
T ss_pred ccccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHh-------ccCCC
Confidence 4333333344556788998888889999999999999999999999986422110 000000000 00011
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
... ......++.+++.+|++.+|++||+++|+++|+|+...
T Consensus 219 ~~~---~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~ 259 (279)
T cd06619 219 VLP---VGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQY 259 (279)
T ss_pred CCC---CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccccc
Confidence 111 11122348899999999999999999999999998644
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-37 Score=323.40 Aligned_cols=260 Identities=18% Similarity=0.254 Sum_probs=203.0
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|+..+.||+|+||+||+|... +|+.||+|++..... ...+.+.+|+++++.++||||+++++++.+.. .
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-------~ 77 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNEN-------N 77 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCC-------E
Confidence 45677799999999999999965 689999998875432 23467899999999999999999999998643 4
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.++||||+++++|.+++.+.+ .+++..+..++.+++.||.|||+. .+++||||||+||++++++.++|+|||++...
T Consensus 78 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~ 154 (284)
T cd06620 78 ICMCMEFMDCGSLDRIYKKGG-PIPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSNILVNSRGQIKLCDFGVSGEL 154 (284)
T ss_pred EEEEEecCCCCCHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHHh--cCeeccCCCHHHEEECCCCcEEEccCCcccch
Confidence 899999999999999987644 689999999999999999999963 18999999999999999999999999998654
Q ss_pred hccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhH--------HHHhhhhhcccccccccc
Q 004195 638 EARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVV--------LVKDLLQVNIGTDEARKS 709 (769)
Q Consensus 638 ~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~ 709 (769)
.............+.+||.+.+..++.++|||||||++||++||+.||...... .+..+.......
T Consensus 155 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 228 (284)
T cd06620 155 INSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQE------ 228 (284)
T ss_pred hhhccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhc------
Confidence 333222333455678899887888999999999999999999999998753321 011111110000
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 710 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
..+.+. ..+....+.+++.+|++.||++|||++|+++++|+....+
T Consensus 229 -~~~~~~---~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~~~ 274 (284)
T cd06620 229 -PPPRLP---SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQALR 274 (284)
T ss_pred -cCCCCC---chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccc
Confidence 011111 1123345889999999999999999999999999876543
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-37 Score=326.14 Aligned_cols=255 Identities=18% Similarity=0.240 Sum_probs=210.2
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC---hhHHHHHHHHHhhcc-CCceeeEeeeeeccCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS---PHMYTYHIELISKLR-HSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~---~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~~ 553 (769)
.+.|+..+.||+|.||.||+++.+ +|+.+|+|.+.+..... .+.+.+|+++|+++. |||||.+++.|.+.+.
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~--- 110 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDS--- 110 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCe---
Confidence 446777899999999999999977 59999999998764433 358999999999998 9999999999987553
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC----ceeeec
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN----FHVKIN 629 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~----~~~kl~ 629 (769)
+++|||+|.||.|.+.+... .+++.....++.|++.|++|||+. +|+|||+||+|+|+... +.+|++
T Consensus 111 ----~~lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~ 181 (382)
T KOG0032|consen 111 ----VYLVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLI 181 (382)
T ss_pred ----EEEEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEe
Confidence 89999999999999999755 389999999999999999999998 99999999999999533 579999
Q ss_pred CCCCchhhhccC-CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhcccccccc
Q 004195 630 SYNLPLLAEARG-KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTDEAR 707 (769)
Q Consensus 630 DFGla~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~~~~ 707 (769)
|||+|....... ....+++..|.+||+.....|+.++||||.||++|.|+.|.+||....... ...+....+
T Consensus 182 DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~------ 255 (382)
T KOG0032|consen 182 DFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDF------ 255 (382)
T ss_pred eCCCceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCC------
Confidence 999998776532 334456667788999988999999999999999999999999998655332 222222211
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 708 KSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 708 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.+..+..+.....+.+++.+++..||.+|+|+.++++|+|....
T Consensus 256 ------~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~ 299 (382)
T KOG0032|consen 256 ------DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSI 299 (382)
T ss_pred ------CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCC
Confidence 22223334445569999999999999999999999999997653
|
|
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=315.25 Aligned_cols=249 Identities=21% Similarity=0.279 Sum_probs=198.9
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC--CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK--KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
+|+..+.||+|++|.||+|+.. +|+.||+|.+.... ....+.+.+|++++++++||||+++++++.+.. .
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-------~ 73 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKG-------K 73 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCC-------E
Confidence 4677889999999999999975 68999999987542 233467889999999999999999999987643 4
Q ss_pred EEEEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 558 IYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
.++||||+++++|.+++... ...+++..+.+++.|+++||+|||+. +++||||||+||++++++.+|++|||+++.
T Consensus 74 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~ 150 (256)
T cd08529 74 LNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKL 150 (256)
T ss_pred EEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEccccccee
Confidence 89999999999999999753 45789999999999999999999998 999999999999999999999999999865
Q ss_pred hhccCC--cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCcc
Q 004195 637 AEARGK--GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 637 ~~~~~~--~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
...... ........|.+||......++.++|||||||++|||+||+.||.............. .. -+.
T Consensus 151 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---------~~-~~~ 220 (256)
T cd08529 151 LSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIR---------GV-FPP 220 (256)
T ss_pred ccCccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHc---------CC-CCC
Confidence 433221 112233457789988888899999999999999999999999876543222111110 00 011
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
+ +......+.+++.+||+.+|++||++.++++++|
T Consensus 221 ~----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~ 255 (256)
T cd08529 221 V----SQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPS 255 (256)
T ss_pred C----ccccCHHHHHHHHHHccCCcccCcCHHHHhhCCC
Confidence 1 1122345899999999999999999999999876
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-37 Score=346.25 Aligned_cols=275 Identities=12% Similarity=0.154 Sum_probs=201.1
Q ss_pred HHHHHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCC------ceeeEeeee
Q 004195 473 DELKEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHS------NLVSALGHC 545 (769)
Q Consensus 473 ~el~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~------nIv~l~~~~ 545 (769)
+++...+++|...+.||+|+||+||+|+.. +++.||||+++... ...+++..|++++++++|. +++++++++
T Consensus 122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~ 200 (467)
T PTZ00284 122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF 200 (467)
T ss_pred CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence 445556788999999999999999999965 68899999996432 2234567788888877654 588888888
Q ss_pred eccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhccccc-CCCCCccccCccccceeeCCCc
Q 004195 546 LDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHT-GIVPGVFSNNLKITDVLLDENF 624 (769)
Q Consensus 546 ~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlKp~NILld~~~ 624 (769)
... ..+.++|||++ +++|.+++.+.+ .+++..+..|+.||+.||+|||+ . +||||||||+|||++.++
T Consensus 201 ~~~------~~~~~iv~~~~-g~~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~~~~ 269 (467)
T PTZ00284 201 QNE------TGHMCIVMPKY-GPCLLDWIMKHG-PFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILMETSD 269 (467)
T ss_pred EcC------CceEEEEEecc-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEecCC
Confidence 642 23589999998 678988887554 68999999999999999999997 5 899999999999998765
Q ss_pred ----------------eeeecCCCCchhhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCc
Q 004195 625 ----------------HVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSEN 688 (769)
Q Consensus 625 ----------------~~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~ 688 (769)
.+||+|||.+..... ......++..|++||.+.+..++.++|||||||++|||+||++||...
T Consensus 270 ~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~-~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~ 348 (467)
T PTZ00284 270 TVVDPVTNRALPPDPCRVRICDLGGCCDERH-SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTH 348 (467)
T ss_pred cccccccccccCCCCceEEECCCCccccCcc-ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 499999998754322 122334556788999998889999999999999999999999999764
Q ss_pred hhHHHHhhhhhcccc-cccc---------ccc----------cCcccc----CCC---CHHHHHHHHHHHHHcCcCCCCC
Q 004195 689 VVVLVKDLLQVNIGT-DEAR---------KSI----------VDPAVM----NEC---SDESLKRMMELCLRCLSNEPKD 741 (769)
Q Consensus 689 ~~~~~~~~~~~~~~~-~~~~---------~~~----------~d~~~~----~~~---~~~~~~~l~~li~~cl~~dP~~ 741 (769)
........+....+. +..+ .++ .++... ... .......+.+|+.+||+.||++
T Consensus 349 ~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~ 428 (467)
T PTZ00284 349 DNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQK 428 (467)
T ss_pred ChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhh
Confidence 432211111111110 0000 000 000000 000 0011245789999999999999
Q ss_pred CCCHHHHHHHhHhhhhhcc
Q 004195 742 RPSVEDTLWNLQFATQIQG 760 (769)
Q Consensus 742 RPs~~evl~~l~~~~~~~~ 760 (769)
|||++|+++|+|+......
T Consensus 429 R~ta~e~L~Hp~~~~~~~~ 447 (467)
T PTZ00284 429 RLNARQMTTHPYVLKYYPE 447 (467)
T ss_pred CCCHHHHhcCccccccCCc
Confidence 9999999999999875443
|
|
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-36 Score=313.77 Aligned_cols=248 Identities=22% Similarity=0.359 Sum_probs=196.7
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
++|+..+.||+|+||.||+|...++..||+|.++.... ..+.+.+|+.++++++|+|++++++++.+. ..+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~--------~~~ 76 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSEE--------PIY 76 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECCC--------CcE
Confidence 35777899999999999999988888899999975433 456799999999999999999999987531 268
Q ss_pred EEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 560 LIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
+||||+++++|.+++... ...+++.++.+++.|++.||+|||+. +|+||||||+||++++++.+|++|||++....
T Consensus 77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~ 153 (260)
T cd05070 77 IVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIE 153 (260)
T ss_pred EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeecc
Confidence 999999999999999743 34689999999999999999999998 99999999999999999999999999986543
Q ss_pred ccCCcc---eeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCcc
Q 004195 639 ARGKGS---AEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 639 ~~~~~~---~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
...... ......|++||......++.++||||||+++|||++ |++||...........+... ..+
T Consensus 154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~----------~~~- 222 (260)
T cd05070 154 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERG----------YRM- 222 (260)
T ss_pred CcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC----------CCC-
Confidence 322111 111234778998888889999999999999999999 88888654432222211110 011
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
..+...+..+.+++.+|++.+|++|||++++.+.+.
T Consensus 223 ---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 258 (260)
T cd05070 223 ---PCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLE 258 (260)
T ss_pred ---CCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHh
Confidence 111222345899999999999999999999987765
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=322.73 Aligned_cols=267 Identities=19% Similarity=0.341 Sum_probs=200.3
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|...+.||+|+||.||+|+.+ +++.||+|.++.... .....+.+|+.++++++||||+++++++.+.. .
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~-------~ 78 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEK-------S 78 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCC-------e
Confidence 46788899999999999999976 688999999875432 23456788999999999999999999987633 3
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.++||||++ ++|.+++......+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||++...
T Consensus 79 ~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 154 (301)
T cd07873 79 LTLVFEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAK 154 (301)
T ss_pred EEEEEeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhcc
Confidence 899999997 589998876555789999999999999999999998 9999999999999999999999999998654
Q ss_pred hccC--CcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccc--cccccccccC
Q 004195 638 EARG--KGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIG--TDEARKSIVD 712 (769)
Q Consensus 638 ~~~~--~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~d 712 (769)
.... .........|.+||.+.+ ..++.++|||||||++|||+||++||...........+..... ....+..+.+
T Consensus 155 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (301)
T cd07873 155 SIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILS 234 (301)
T ss_pred CCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhc
Confidence 3221 112223455777887654 3578899999999999999999999976543221111111111 0111111110
Q ss_pred ---------ccccCCC----CHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 713 ---------PAVMNEC----SDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 713 ---------~~~~~~~----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
+.....+ .+.....+.+++.+|++.||.+|||++|+++|+||..-
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~ 292 (301)
T cd07873 235 NEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCL 292 (301)
T ss_pred cccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 1111111 11123357899999999999999999999999999643
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=318.85 Aligned_cols=255 Identities=17% Similarity=0.265 Sum_probs=199.9
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCc----EEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGT----LVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~----~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
++|+..+.||+|+||+||+|++. +|. .||+|.++.... ...+++.+|+.+++.++||||++++++|....
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~---- 82 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTST---- 82 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCC----
Confidence 46778899999999999999853 454 489999875432 22457889999999999999999999987522
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
.++++||+++|+|.++++.....+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 83 ----~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~ 155 (279)
T cd05109 83 ----VQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGL 155 (279)
T ss_pred ----cEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCc
Confidence 5899999999999999986555789999999999999999999998 999999999999999999999999999
Q ss_pred chhhhccCCcc----eeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccc
Q 004195 634 PLLAEARGKGS----AEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARK 708 (769)
Q Consensus 634 a~~~~~~~~~~----~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (769)
++......... ......|++||......++.++|||||||++|||+| |.+|+..........++.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~------ 229 (279)
T cd05109 156 ARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGER------ 229 (279)
T ss_pred eeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCc------
Confidence 87654322111 111234678998888889999999999999999998 8899876443333332221100
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
+.....+ ...+.+++.+||+.||++||++.|+++.+......+
T Consensus 230 ----~~~~~~~----~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 230 ----LPQPPIC----TIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred ----CCCCccC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 0111122 334889999999999999999999998887665544
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=320.63 Aligned_cols=267 Identities=16% Similarity=0.278 Sum_probs=204.5
Q ss_pred cCHHHHHHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhc-cCCceeeEeeeeec
Q 004195 470 FTLDELKEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKL-RHSNLVSALGHCLD 547 (769)
Q Consensus 470 ~~~~el~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~ 547 (769)
+.++++..++++|+..+.||+|+||.||+|+.. +++.+|+|.+... .....++.+|+.+++++ +||||++++++|..
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPI-HDIDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccc-cchHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 556777888999999999999999999999975 6889999988643 22346788999999999 69999999999864
Q ss_pred cCCCCCCcceEEEEEeccCCCchhhhhc---CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc
Q 004195 548 FSLDDPSISIIYLIFEYAPNETLRSFIS---GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF 624 (769)
Q Consensus 548 ~~~~~~~~~~~~lV~Ey~~~gsL~~~l~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~ 624 (769)
... +..+..++||||+++++|.+++. .....+++..+..++.|+++||.|||+. +|+||||||+||++++++
T Consensus 87 ~~~--~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~ 161 (286)
T cd06638 87 KDV--KNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEG 161 (286)
T ss_pred ccc--CCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCC
Confidence 322 12346899999999999999875 2234689999999999999999999998 999999999999999999
Q ss_pred eeeecCCCCchhhhccC--CcceeecCCCcchhhhc-----cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhh
Q 004195 625 HVKINSYNLPLLAEARG--KGSAEVSSPAKKTSVLA-----RTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLL 697 (769)
Q Consensus 625 ~~kl~DFGla~~~~~~~--~~~~~~~~~~~~pe~~~-----~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~ 697 (769)
.+|++|||+++...... .........|++||.+. ...++.++|||||||++|||++|+.|+....... ...
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~--~~~ 239 (286)
T cd06638 162 GVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMR--ALF 239 (286)
T ss_pred CEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhH--HHh
Confidence 99999999986543221 11223345577888764 3457899999999999999999999986543211 111
Q ss_pred hhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 698 QVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 698 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
..... ......++. .+ ...+.+++.+||+.||++|||+.|+++|+|+
T Consensus 240 ~~~~~---~~~~~~~~~---~~----~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 240 KIPRN---PPPTLHQPE---LW----SNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred hcccc---CCCcccCCC---Cc----CHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 10000 000111111 12 2348899999999999999999999999985
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=314.98 Aligned_cols=251 Identities=18% Similarity=0.295 Sum_probs=202.0
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
++|+..+.||+|+||.||+|+.. +++.||+|.+..... .+++.+|++++++++||||+++++++.+.. ..
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~-------~~ 73 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNT-------DL 73 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCC-------cE
Confidence 57888999999999999999976 488999999875432 678999999999999999999999998643 38
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
++++||+++++|.+++......+++..+..++.|+++||+|||+. +++||||+|+||+++.++.+||+|||++....
T Consensus 74 ~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~ 150 (256)
T cd06612 74 WIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLT 150 (256)
T ss_pred EEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcc
Confidence 999999999999999976556799999999999999999999998 99999999999999999999999999987654
Q ss_pred ccCC--cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCcccc
Q 004195 639 ARGK--GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM 716 (769)
Q Consensus 639 ~~~~--~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 716 (769)
.... ........|.+||...+..++.++|||||||++|||+||++|+............. .. ..+.
T Consensus 151 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~--~~--------~~~~-- 218 (256)
T cd06612 151 DTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIP--NK--------PPPT-- 218 (256)
T ss_pred cCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhc--cC--------CCCC--
Confidence 3321 11223456788998888889999999999999999999999987533211111000 00 0000
Q ss_pred CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 717 NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 717 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
...+......+.+++.+||+.+|++|||+.|+++|+|+
T Consensus 219 ~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 219 LSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred CCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 01112233458899999999999999999999999985
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=319.76 Aligned_cols=254 Identities=16% Similarity=0.210 Sum_probs=198.6
Q ss_pred CCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC---hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 482 FDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS---PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~---~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
|+..+.||+|+||.||+|... +++.||||.+....... .+.+.+|+.++++++|+||+++++.+.+.+ .
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~-------~ 74 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKD-------A 74 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCC-------E
Confidence 667789999999999999976 78999999987543222 245778999999999999999999987643 3
Q ss_pred EEEEEeccCCCchhhhhcC-CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 558 IYLIFEYAPNETLRSFISG-PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
.++||||+++++|.+++.. ....+++.++..++.|++.||+|||+. +|+||||||+||++++++.++|+|||++..
T Consensus 75 ~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~ 151 (285)
T cd05630 75 LCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVH 151 (285)
T ss_pred EEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceee
Confidence 8999999999999998863 233689999999999999999999998 999999999999999999999999999865
Q ss_pred hhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccc
Q 004195 637 AEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAV 715 (769)
Q Consensus 637 ~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 715 (769)
...... ....++..|++||.+.+..++.++|||||||++|||++|+.||................. . .....
T Consensus 152 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~---~----~~~~~ 224 (285)
T cd05630 152 VPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK---E----VQEEY 224 (285)
T ss_pred cCCCccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhh---h----hhhhc
Confidence 432221 122344567889998888899999999999999999999999975332111110000000 0 00111
Q ss_pred cCCCCHHHHHHHHHHHHHcCcCCCCCCCC-----HHHHHHHhHhhh
Q 004195 716 MNECSDESLKRMMELCLRCLSNEPKDRPS-----VEDTLWNLQFAT 756 (769)
Q Consensus 716 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~l~~~~ 756 (769)
...++ ..+.+++.+||+.||++||| ++|+++|+||..
T Consensus 225 ~~~~~----~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~ 266 (285)
T cd05630 225 SEKFS----PDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQ 266 (285)
T ss_pred CccCC----HHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhc
Confidence 12233 34889999999999999999 999999999975
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=319.35 Aligned_cols=249 Identities=22% Similarity=0.332 Sum_probs=193.5
Q ss_pred CCCCcCccccCCceeEEEEEe-----CCCcEEEEEEccccCCC-ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 481 CFDSSSFMCDASHGQIYKGKL-----TDGTLVAIRSLKMSKKS-SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~-----~~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
+|+..+.||+|+||.||+|+. .++..||+|.+...... ....+.+|++++++++||||+++++++.....
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---- 81 (283)
T cd05090 6 AVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQP---- 81 (283)
T ss_pred hceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCc----
Confidence 567789999999999999984 24678999999754322 23568899999999999999999999876443
Q ss_pred cceEEEEEeccCCCchhhhhcCC----------------CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccce
Q 004195 555 ISIIYLIFEYAPNETLRSFISGP----------------GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDV 618 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~----------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NI 618 (769)
.++||||+++++|.+++... ...+++.+...++.|++.||+|||+. +|+||||||+||
T Consensus 82 ---~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~ni 155 (283)
T cd05090 82 ---VCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNI 155 (283)
T ss_pred ---eEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceE
Confidence 79999999999999998521 12478999999999999999999998 999999999999
Q ss_pred eeCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHH
Q 004195 619 LLDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLV 693 (769)
Q Consensus 619 Lld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~ 693 (769)
++++++.+|++|||+++....... ........|.+||...+..++.++|||||||++|||++ |.+||........
T Consensus 156 li~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~ 235 (283)
T cd05090 156 LIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEV 235 (283)
T ss_pred EEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence 999999999999999865432211 11112234778998877889999999999999999999 8888865433322
Q ss_pred HhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 694 KDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
.+.+.... .+.....++ .++.+++.+||+.||++||++.+|++++.
T Consensus 236 ~~~~~~~~----------~~~~~~~~~----~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05090 236 IEMVRKRQ----------LLPCSEDCP----PRMYSLMTECWQEGPSRRPRFKDIHTRLR 281 (283)
T ss_pred HHHHHcCC----------cCCCCCCCC----HHHHHHHHHHcccCcccCcCHHHHHHHhh
Confidence 22221100 011112233 34889999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=318.98 Aligned_cols=254 Identities=21% Similarity=0.333 Sum_probs=198.5
Q ss_pred cCCCCcCccccCCceeEEEEEeC------CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT------DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
++|...+.||+|+||.||++... ++..+|+|.+........+.+.+|++++++++||||++++++|...+.
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--- 81 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP--- 81 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCc---
Confidence 46778899999999999999842 356799999876544445679999999999999999999999976443
Q ss_pred CcceEEEEEeccCCCchhhhhcCCC------------CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPG------------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD 621 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld 621 (769)
.++||||+++++|.+++...+ ..+++.++..++.|++.||+|||+. +++||||||+||+++
T Consensus 82 ----~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~ 154 (288)
T cd05093 82 ----LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVG 154 (288)
T ss_pred ----cEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEc
Confidence 899999999999999986322 2489999999999999999999998 999999999999999
Q ss_pred CCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhh
Q 004195 622 ENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDL 696 (769)
Q Consensus 622 ~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~ 696 (769)
+++.+||+|||+++....... ........|++||......++.++|||||||++|||+| |++||...........
T Consensus 155 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~ 234 (288)
T cd05093 155 ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIEC 234 (288)
T ss_pred cCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 999999999999865432211 11111235788998888889999999999999999999 8988865433222111
Q ss_pred hhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 697 LQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 697 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
+.... .+.....++ ..+.+++.+||+.||.+|||+.|+++.++....
T Consensus 235 i~~~~----------~~~~~~~~~----~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~ 281 (288)
T cd05093 235 ITQGR----------VLQRPRTCP----KEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAK 281 (288)
T ss_pred HHcCC----------cCCCCCCCC----HHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 11100 011111233 348999999999999999999999988876654
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=317.91 Aligned_cols=248 Identities=16% Similarity=0.224 Sum_probs=191.1
Q ss_pred cccCCceeEEEEEeC-CCcEEEEEEccccCC---CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEEEe
Q 004195 488 MCDASHGQIYKGKLT-DGTLVAIRSLKMSKK---SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFE 563 (769)
Q Consensus 488 iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV~E 563 (769)
||+|+||.||+++.+ +|+.||+|++..... .....+..|++++++++||||+++++++.+.. ..++|||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~-------~~~lv~e 73 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKT-------HLCLVMS 73 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCC-------eEEEEEe
Confidence 699999999999975 699999999964321 22345667999999999999999999887643 4899999
Q ss_pred ccCCCchhhhhcC-CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhccCC
Q 004195 564 YAPNETLRSFISG-PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGK 642 (769)
Q Consensus 564 y~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~ 642 (769)
|+++|+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 74 ~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~ 150 (277)
T cd05607 74 LMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKT 150 (277)
T ss_pred cCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCce
Confidence 9999999988863 334689999999999999999999998 999999999999999999999999999865433221
Q ss_pred -cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHH-HhhhhhccccccccccccCccccCCCC
Q 004195 643 -GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLV-KDLLQVNIGTDEARKSIVDPAVMNECS 720 (769)
Q Consensus 643 -~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~ 720 (769)
.....+..|++||.+....++.++||||+||++|||++|+.||........ ......... ..... ....+
T Consensus 151 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~------~~~~~-~~~~~- 222 (277)
T cd05607 151 ITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLE------DEVKF-EHQNF- 222 (277)
T ss_pred eeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhc------ccccc-ccccC-
Confidence 112334567889998888899999999999999999999999865322111 111111000 00000 00122
Q ss_pred HHHHHHHHHHHHHcCcCCCCCCCCH----HHHHHHhHhhh
Q 004195 721 DESLKRMMELCLRCLSNEPKDRPSV----EDTLWNLQFAT 756 (769)
Q Consensus 721 ~~~~~~l~~li~~cl~~dP~~RPs~----~evl~~l~~~~ 756 (769)
..++.+++.+||+.||++||++ +++++|.||..
T Consensus 223 ---~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~ 259 (277)
T cd05607 223 ---TEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKT 259 (277)
T ss_pred ---CHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcC
Confidence 3348899999999999999999 67889999864
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=321.58 Aligned_cols=268 Identities=19% Similarity=0.270 Sum_probs=206.5
Q ss_pred ccCHHHHHHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhc-cCCceeeEeeeee
Q 004195 469 TFTLDELKEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKL-RHSNLVSALGHCL 546 (769)
Q Consensus 469 ~~~~~el~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~ 546 (769)
.++++++..++++|...+.||+|+||.||+|... +++.+|+|.+.... .....+.+|+.+++++ +|||+++++++|.
T Consensus 11 ~~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~ 89 (291)
T cd06639 11 MLGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFY 89 (291)
T ss_pred hhhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEE
Confidence 3566778888999999999999999999999975 68999999986432 2346788899999999 7999999999987
Q ss_pred ccCCCCCCcceEEEEEeccCCCchhhhhcC---CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC
Q 004195 547 DFSLDDPSISIIYLIFEYAPNETLRSFISG---PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN 623 (769)
Q Consensus 547 ~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~ 623 (769)
..+. ......++||||+++|+|.++++. ....+++..+..++.|++.||+|||+. +++||||||+||+++++
T Consensus 90 ~~~~--~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~ 164 (291)
T cd06639 90 KADK--LVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTE 164 (291)
T ss_pred eccc--cCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCC
Confidence 5432 123458999999999999998862 334689999999999999999999998 99999999999999999
Q ss_pred ceeeecCCCCchhhhccCC--cceeecCCCcchhhhccC-----CCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHh
Q 004195 624 FHVKINSYNLPLLAEARGK--GSAEVSSPAKKTSVLART-----EQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKD 695 (769)
Q Consensus 624 ~~~kl~DFGla~~~~~~~~--~~~~~~~~~~~pe~~~~~-----~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~ 695 (769)
+.+||+|||++........ ........|.+||.+... .++.++|||||||++|||++|++|+...... ....
T Consensus 165 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~ 244 (291)
T cd06639 165 GGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFK 244 (291)
T ss_pred CCEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHH
Confidence 9999999999865432221 112233456778876433 3689999999999999999999998754321 1111
Q ss_pred hhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 696 LLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 696 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
+.. .. ...+.+ ++.....+.+++.+||+.+|++||++.|+++|+|+.
T Consensus 245 ~~~---~~---~~~~~~-------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 245 IPR---NP---PPTLLH-------PEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred Hhc---CC---CCCCCc-------ccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 110 00 000111 112234588999999999999999999999999973
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=319.07 Aligned_cols=250 Identities=21% Similarity=0.338 Sum_probs=196.3
Q ss_pred cCCCCcCccccCCceeEEEEEeC------CCcEEEEEEccccCCC-ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT------DGTLVAIRSLKMSKKS-SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD 552 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~ 552 (769)
++|...+.||+|+||.||+|+.. +++.||||.++..... ..+.+.+|++++++++||||+++++++....
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--- 81 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGD--- 81 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCC---
Confidence 45777899999999999999863 2478999999765433 3467999999999999999999999998643
Q ss_pred CCcceEEEEEeccCCCchhhhhcCCC-------------CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCcccccee
Q 004195 553 PSISIIYLIFEYAPNETLRSFISGPG-------------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVL 619 (769)
Q Consensus 553 ~~~~~~~lV~Ey~~~gsL~~~l~~~~-------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NIL 619 (769)
..++||||+++|+|.+++...+ ..+++.++..++.|++.|++|||+. +++||||||+||+
T Consensus 82 ----~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nil 154 (280)
T cd05049 82 ----PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCL 154 (280)
T ss_pred ----CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEE
Confidence 3899999999999999996332 3478999999999999999999998 9999999999999
Q ss_pred eCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHH
Q 004195 620 LDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVK 694 (769)
Q Consensus 620 ld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~ 694 (769)
++.++.+|++|||+++....... ........|++||.+....++.++|||||||++|||++ |+.||.........
T Consensus 155 i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~ 234 (280)
T cd05049 155 VGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVI 234 (280)
T ss_pred EcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHH
Confidence 99999999999999864322111 11112345778998888889999999999999999999 99998654433222
Q ss_pred hhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 695 DLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 695 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
..+.... .+.....+ ...+.+++.+||+.||++||++.||++.+.
T Consensus 235 ~~~~~~~----------~~~~~~~~----~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 235 ECITQGR----------LLQRPRTC----PSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HHHHcCC----------cCCCCCCC----CHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 2211100 00111122 334889999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=326.18 Aligned_cols=244 Identities=17% Similarity=0.212 Sum_probs=189.4
Q ss_pred CccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHH-HHhhccCCceeeEeeeeeccCCCCCCcceEEE
Q 004195 486 SFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIE-LISKLRHSNLVSALGHCLDFSLDDPSISIIYL 560 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~-~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~l 560 (769)
+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|.. +++.++||||+++++++.+.+ ..++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~-------~~~l 73 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAE-------KLYF 73 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCC-------EEEE
Confidence 46999999999999975 68999999987532 122344555654 578899999999999887643 3899
Q ss_pred EEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhcc
Q 004195 561 IFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEAR 640 (769)
Q Consensus 561 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~ 640 (769)
||||+++|+|.+.+.... .+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 74 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 149 (321)
T cd05603 74 VLDYVNGGELFFHLQRER-CFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP 149 (321)
T ss_pred EEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCC
Confidence 999999999998887543 688888999999999999999998 9999999999999999999999999998643211
Q ss_pred C--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccCC
Q 004195 641 G--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNE 718 (769)
Q Consensus 641 ~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 718 (769)
. .....++..|++||.+....++.++|||||||++|||++|++||...........+.. . ...
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~---~--------~~~---- 214 (321)
T cd05603 150 EETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILH---K--------PLQ---- 214 (321)
T ss_pred CCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhc---C--------CCC----
Confidence 1 1222345567889998888899999999999999999999999976543322221110 0 001
Q ss_pred CCHHHHHHHHHHHHHcCcCCCCCCCCH----HHHHHHhHhh
Q 004195 719 CSDESLKRMMELCLRCLSNEPKDRPSV----EDTLWNLQFA 755 (769)
Q Consensus 719 ~~~~~~~~l~~li~~cl~~dP~~RPs~----~evl~~l~~~ 755 (769)
.++.....+.+++.+|++.||++||++ .|+++|+|+.
T Consensus 215 ~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~ 255 (321)
T cd05603 215 LPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFS 255 (321)
T ss_pred CCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcC
Confidence 111223348899999999999999865 5999999875
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-36 Score=312.95 Aligned_cols=243 Identities=20% Similarity=0.250 Sum_probs=190.3
Q ss_pred ccccCCceeEEEEEeC---CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEEE
Q 004195 487 FMCDASHGQIYKGKLT---DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIF 562 (769)
Q Consensus 487 ~iG~G~~g~Vy~~~~~---~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV~ 562 (769)
.||+|+||.||+|++. ++..||+|.+..... ...+.+.+|+.++++++||||++++++|... ..++||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~--------~~~lv~ 73 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAE--------ALMLVM 73 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCC--------CeEEEE
Confidence 3899999999999864 356799999975532 2235689999999999999999999988532 279999
Q ss_pred eccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhccCC
Q 004195 563 EYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGK 642 (769)
Q Consensus 563 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~ 642 (769)
||+++|+|.+++......+++..+.+++.|+++||+|||+. +++||||||+||+++.++.+|++|||+++.......
T Consensus 74 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~ 150 (257)
T cd05115 74 EMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDS 150 (257)
T ss_pred EeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCcc
Confidence 99999999999975555799999999999999999999998 999999999999999999999999999865432211
Q ss_pred cc---e--eecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCcccc
Q 004195 643 GS---A--EVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM 716 (769)
Q Consensus 643 ~~---~--~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 716 (769)
.. . .....|++||......++.++|||||||++||+++ |++||.......+...+.... .+...
T Consensus 151 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~----------~~~~~ 220 (257)
T cd05115 151 YYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGK----------RLDCP 220 (257)
T ss_pred ceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCC----------CCCCC
Confidence 11 1 11234678888877789999999999999999996 999987654333222221110 01111
Q ss_pred CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 717 NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 717 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
..+ ..++.+++.+||+.+|++||++.+|.+.+..
T Consensus 221 ~~~----~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~ 254 (257)
T cd05115 221 AEC----PPEMYALMKDCWIYKWEDRPNFAKVEERMRT 254 (257)
T ss_pred CCC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHhh
Confidence 222 3448899999999999999999999988763
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-36 Score=314.69 Aligned_cols=251 Identities=21% Similarity=0.335 Sum_probs=197.4
Q ss_pred CCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCC------hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 481 CFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSS------PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~------~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
+|...+.||+|+||.||+|...+|+.+|||.++...... ...+.+|++++++++|+||++++++|.+.+
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----- 75 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDN----- 75 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCC-----
Confidence 467789999999999999998889999999987542211 245888999999999999999999997643
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
..++||||+++++|.+++.+.. .+++..+..++.|++.||+|||+. +|+|+||||+||++++++.+||+|||++
T Consensus 76 --~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~ 149 (265)
T cd06631 76 --TISIFMEFVPGGSISSILNRFG-PLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCA 149 (265)
T ss_pred --eEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhh
Confidence 3899999999999999997554 688999999999999999999998 9999999999999999999999999998
Q ss_pred hhhhccC--------CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccc
Q 004195 635 LLAEARG--------KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEA 706 (769)
Q Consensus 635 ~~~~~~~--------~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (769)
....... .........+.+||...+..++.++|||||||++|||+||+.||...............
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~------ 223 (265)
T cd06631 150 RRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAH------ 223 (265)
T ss_pred HhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhc------
Confidence 6542111 01112334567888888888899999999999999999999998753321111100000
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 707 RKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 707 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
....+.+...++ ..+.+++.+||+.+|++||++.|+++|+|+
T Consensus 224 --~~~~~~~~~~~~----~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 224 --RGLMPRLPDSFS----AAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred --cCCCCCCCCCCC----HHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 001122222233 348899999999999999999999999985
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-37 Score=332.25 Aligned_cols=253 Identities=18% Similarity=0.261 Sum_probs=197.3
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|+..+.||+|+||.||+|+.. +++.||||+++... ......+.+|++++.+++||||+++++++.+..
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~------ 74 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKR------ 74 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC------
Confidence 46888999999999999999976 68999999997532 223456788999999999999999999987643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+++|+|.+++.+.+ .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 75 -~~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~ 149 (360)
T cd05627 75 -NLYLIMEFLPGGDMMTLLMKKD-TLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCT 149 (360)
T ss_pred -EEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCc
Confidence 4899999999999999997554 689999999999999999999998 99999999999999999999999999985
Q ss_pred hhhccCC-------------------------------------cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHH
Q 004195 636 LAEARGK-------------------------------------GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEI 678 (769)
Q Consensus 636 ~~~~~~~-------------------------------------~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~el 678 (769)
....... ....++..|++||.+.+..++.++|||||||++|||
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel 229 (360)
T cd05627 150 GLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEM 229 (360)
T ss_pred ccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeec
Confidence 4321100 012345567889999888999999999999999999
Q ss_pred HhCCCCCCCchhHHH-HhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCC---CHHHHHHHhHh
Q 004195 679 IVGRPITSENVVVLV-KDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRP---SVEDTLWNLQF 754 (769)
Q Consensus 679 ltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP---s~~evl~~l~~ 754 (769)
+||++||........ ..+..+. ....-|.. ...+ .++.+++.+++ .||.+|+ +++|+++|+||
T Consensus 230 ~tG~~Pf~~~~~~~~~~~i~~~~-------~~~~~p~~-~~~s----~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f 296 (360)
T cd05627 230 LIGYPPFCSETPQETYRKVMNWK-------ETLVFPPE-VPIS----EKAKDLILRFC-TDSENRIGSNGVEEIKSHPFF 296 (360)
T ss_pred ccCCCCCCCCCHHHHHHHHHcCC-------CceecCCC-CCCC----HHHHHHHHHhc-cChhhcCCCCCHHHHhcCCCC
Confidence 999999976543222 1111100 00000100 0122 34778888876 4999998 58999999998
Q ss_pred hh
Q 004195 755 AT 756 (769)
Q Consensus 755 ~~ 756 (769)
..
T Consensus 297 ~~ 298 (360)
T cd05627 297 EG 298 (360)
T ss_pred CC
Confidence 64
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-37 Score=329.32 Aligned_cols=254 Identities=20% Similarity=0.290 Sum_probs=195.2
Q ss_pred cCCCCcCccccCCceeEEEEEeC------CCcEEEEEEccccCCC-ChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT------DGTLVAIRSLKMSKKS-SPHMYTYHIELISKL-RHSNLVSALGHCLDFSLD 551 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~ 551 (769)
++|+..+.||+|+||.||+|+.. +++.||+|+++..... ..+.+.+|++++.++ +|+||++++++|...+
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~-- 84 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPG-- 84 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC--
Confidence 35788899999999999999742 2578999999754322 234677899999999 7999999999886532
Q ss_pred CCCcceEEEEEeccCCCchhhhhcCC------------------------------------------------------
Q 004195 552 DPSISIIYLIFEYAPNETLRSFISGP------------------------------------------------------ 577 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~~~------------------------------------------------------ 577 (769)
...+++|||+++|+|.+++...
T Consensus 85 ----~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (337)
T cd05054 85 ----GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDE 160 (337)
T ss_pred ----CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccch
Confidence 2478999999999999988521
Q ss_pred ------CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhccCC----cceee
Q 004195 578 ------GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGK----GSAEV 647 (769)
Q Consensus 578 ------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~----~~~~~ 647 (769)
...++|..+.+++.||++||+|||+. +|+||||||+||++++++.+||+|||+++....... .....
T Consensus 161 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~ 237 (337)
T cd05054 161 EGDELYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARL 237 (337)
T ss_pred hhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCC
Confidence 12689999999999999999999998 999999999999999999999999999975432211 11112
Q ss_pred cCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchh-HHHHhhhhhccccccccccccCccccCCCCHHHHH
Q 004195 648 SSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVV-VLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLK 725 (769)
Q Consensus 648 ~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 725 (769)
...|++||.+.+..++.++|||||||++|||++ |+.||..... +.....+.... .+. .+.....
T Consensus 238 ~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~----------~~~----~~~~~~~ 303 (337)
T cd05054 238 PLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGT----------RMR----APEYATP 303 (337)
T ss_pred CccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccC----------CCC----CCccCCH
Confidence 235788998888899999999999999999998 9998864321 11111111100 001 1112234
Q ss_pred HHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 726 RMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 726 ~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
++.+++.+||+.+|++||++.|+++++..+-
T Consensus 304 ~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~ 334 (337)
T cd05054 304 EIYSIMLDCWHNNPEDRPTFSELVEILGDLL 334 (337)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 5889999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=325.11 Aligned_cols=250 Identities=18% Similarity=0.237 Sum_probs=196.7
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhcc-CCceeeEeeeeeccCCCCCCc
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLR-HSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~~~~ 555 (769)
+|+..+.||+|+||.||+|+.. +|+.||+|++.... ....+.+..|..++..+. |++|+++++++.+.+
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~------ 74 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVD------ 74 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCC------
Confidence 3677899999999999999965 68999999997542 223356778899988885 577888888877533
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+++|+|.+++...+ .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 75 -~~~lv~Ey~~~g~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~ 149 (323)
T cd05615 75 -RLYFVMEYVNGGDLMYHIQQVG-KFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCK 149 (323)
T ss_pred -EEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEecccccc
Confidence 3899999999999999987554 689999999999999999999998 99999999999999999999999999986
Q ss_pred hhhccC--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCc
Q 004195 636 LAEARG--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 636 ~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
...... .....++..|++||.+.+..++.++|||||||++|||+||++||...........+.. . ..
T Consensus 150 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~---~--------~~ 218 (323)
T cd05615 150 EHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIME---H--------NV 218 (323)
T ss_pred ccCCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh---C--------CC
Confidence 432221 1222345678889998888899999999999999999999999976543322221110 0 01
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCC-----HHHHHHHhHhhh
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPS-----VEDTLWNLQFAT 756 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~l~~~~ 756 (769)
...... ..++.+++.+|++.+|++|++ .+++.+|+||..
T Consensus 219 ~~p~~~----~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~ 262 (323)
T cd05615 219 SYPKSL----SKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRR 262 (323)
T ss_pred CCCccC----CHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCC
Confidence 111122 234789999999999999997 578999998764
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=321.22 Aligned_cols=254 Identities=23% Similarity=0.362 Sum_probs=195.2
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCc--EEEEEEccccC-CCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGT--LVAIRSLKMSK-KSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~--~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~ 554 (769)
++|+..+.||+|+||.||+|+.+ ++. .+|+|.++... ....+.+.+|++++.++ +||||+++++++.+.+.
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~---- 77 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGY---- 77 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCc----
Confidence 46888899999999999999975 343 47888887432 22345788999999999 79999999999876433
Q ss_pred cceEEEEEeccCCCchhhhhcCCC---------------CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCcccccee
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPG---------------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVL 619 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NIL 619 (769)
.++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+
T Consensus 78 ---~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil 151 (297)
T cd05089 78 ---LYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVL 151 (297)
T ss_pred ---ceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEE
Confidence 799999999999999986321 2588999999999999999999998 9999999999999
Q ss_pred eCCCceeeecCCCCchhhhccCCcc-eeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhh
Q 004195 620 LDENFHVKINSYNLPLLAEARGKGS-AEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLL 697 (769)
Q Consensus 620 ld~~~~~kl~DFGla~~~~~~~~~~-~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~ 697 (769)
+++++.+||+|||++.......... ......|++||......++.++|||||||++|||+| |+.||............
T Consensus 152 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~ 231 (297)
T cd05089 152 VGENLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKL 231 (297)
T ss_pred ECCCCeEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 9999999999999985432111111 111234778998888889999999999999999998 99998654433221111
Q ss_pred hhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 698 QVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 698 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
... ..+.....++ ..+.+++.+||+.+|.+||+++++++.+..+.+
T Consensus 232 ~~~----------~~~~~~~~~~----~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~ 277 (297)
T cd05089 232 PQG----------YRMEKPRNCD----DEVYELMRQCWRDRPYERPPFAQISVQLSRMLE 277 (297)
T ss_pred hcC----------CCCCCCCCCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 100 0111112233 348899999999999999999999999875543
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=320.21 Aligned_cols=253 Identities=16% Similarity=0.254 Sum_probs=197.3
Q ss_pred CCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEE
Q 004195 482 FDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYL 560 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~l 560 (769)
|+..+.||+|+||.||+|... ++..+|+|.+........+.+.+|+++++.++||||++++++|.... ..++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~-------~~~~ 79 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN-------NLWI 79 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCC-------EEEE
Confidence 556788999999999999976 58889999987554334567889999999999999999999987633 4899
Q ss_pred EEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhcc
Q 004195 561 IFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEAR 640 (769)
Q Consensus 561 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~ 640 (769)
||||+++++|.+++.+....+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+|++|||++......
T Consensus 80 v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~ 156 (282)
T cd06643 80 LIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT 156 (282)
T ss_pred EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEcccccccccccc
Confidence 9999999999998875445799999999999999999999998 9999999999999999999999999998544221
Q ss_pred C--CcceeecCCCcchhhhc-----cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhccccccccccccC
Q 004195 641 G--KGSAEVSSPAKKTSVLA-----RTEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIGTDEARKSIVD 712 (769)
Q Consensus 641 ~--~~~~~~~~~~~~pe~~~-----~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~d 712 (769)
. ......+..|++||.+. ...++.++|||||||++|||++|++||...... ........ . .
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~---~--------~ 225 (282)
T cd06643 157 IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS---E--------P 225 (282)
T ss_pred ccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhc---C--------C
Confidence 1 11122344577788763 345788999999999999999999998654321 11111110 0 0
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 713 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
+.. ..+......+.+++.+||+.+|++||++.++++|+|+...
T Consensus 226 ~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 268 (282)
T cd06643 226 PTL--AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVN 268 (282)
T ss_pred CCC--CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEecc
Confidence 000 0111123358899999999999999999999999998754
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=333.34 Aligned_cols=252 Identities=21% Similarity=0.311 Sum_probs=193.8
Q ss_pred hcCCCCcCccccCCceeEEEEEeC------CCcEEEEEEccccCCC-ChhHHHHHHHHHhhcc-CCceeeEeeeeeccCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT------DGTLVAIRSLKMSKKS-SPHMYTYHIELISKLR-HSNLVSALGHCLDFSL 550 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~ 550 (769)
.++|...+.||+|+||.||+|+.. .+..||||+++..... ..+.+.+|+++++++. |||||+++++|.+..
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~- 114 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG- 114 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC-
Confidence 346778899999999999999853 1347999999754322 2457899999999996 999999999997643
Q ss_pred CCCCcceEEEEEeccCCCchhhhhcCC-----------------------------------------------------
Q 004195 551 DDPSISIIYLIFEYAPNETLRSFISGP----------------------------------------------------- 577 (769)
Q Consensus 551 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~----------------------------------------------------- 577 (769)
..++|||||++|+|.++++..
T Consensus 115 ------~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (400)
T cd05105 115 ------PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQY 188 (400)
T ss_pred ------ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccccccccccccc
Confidence 389999999999999887531
Q ss_pred ------------------------------------------CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccc
Q 004195 578 ------------------------------------------GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKI 615 (769)
Q Consensus 578 ------------------------------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp 615 (769)
...+++..+.+++.|+++||+|||+. +|+||||||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp 265 (400)
T cd05105 189 VPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAA 265 (400)
T ss_pred chhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCh
Confidence 12478889999999999999999998 999999999
Q ss_pred cceeeCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchh
Q 004195 616 TDVLLDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVV 690 (769)
Q Consensus 616 ~NILld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~ 690 (769)
+||++++++.+||+|||+++....... ........|++||.+.+..++.++|||||||++|||++ |..|+.....
T Consensus 266 ~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~ 345 (400)
T cd05105 266 RNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIV 345 (400)
T ss_pred HhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccch
Confidence 999999999999999999865432211 11112234778998888889999999999999999997 8888865322
Q ss_pred H-HHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 691 V-LVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 691 ~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
. .....+... ..+.. +...+..+.+++.+||+.||++||++.++.+.+..
T Consensus 346 ~~~~~~~~~~~----------~~~~~----~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~ 396 (400)
T cd05105 346 DSTFYNKIKSG----------YRMAK----PDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVES 396 (400)
T ss_pred hHHHHHHHhcC----------CCCCC----CccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHH
Confidence 1 111111100 01111 12223458999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=327.07 Aligned_cols=248 Identities=18% Similarity=0.208 Sum_probs=192.1
Q ss_pred CccccCCceeEEEEEeC-CCcEEEEEEccccCC---CChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCCcceEEE
Q 004195 486 SFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK---SSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPSISIIYL 560 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~~~l 560 (769)
+.||+|+||.||+|+.. +++.||+|+++.... ...+.+.+|+.++.++ +||||+++++++.+.. ..++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~-------~~~l 73 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTS-------RLFL 73 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCC-------EEEE
Confidence 46999999999999975 688999999985422 2234578899999888 6999999999987643 3899
Q ss_pred EEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhcc
Q 004195 561 IFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEAR 640 (769)
Q Consensus 561 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~ 640 (769)
||||+++|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 74 v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 149 (327)
T cd05617 74 VIEYVNGGDLMFHMQRQR-KLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP 149 (327)
T ss_pred EEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCC
Confidence 999999999999887544 699999999999999999999998 9999999999999999999999999998642211
Q ss_pred --CCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhH----HHHhhhhhccccccccccccCcc
Q 004195 641 --GKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVV----LVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 641 --~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
......++..|++||.+.+..++.++|||||||++|||+||+.||...... ............ ...
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~--------~~~ 221 (327)
T cd05617 150 GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEK--------PIR 221 (327)
T ss_pred CCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhC--------CCC
Confidence 112233455678899988889999999999999999999999999532110 000000100000 011
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCC------HHHHHHHhHhhh
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPS------VEDTLWNLQFAT 756 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs------~~evl~~l~~~~ 756 (769)
+....+ ..+.+++.+|++.||++|++ ++++++|+||..
T Consensus 222 ~p~~~~----~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~ 265 (327)
T cd05617 222 IPRFLS----VKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRS 265 (327)
T ss_pred CCCCCC----HHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCC
Confidence 111222 34789999999999999997 579999999864
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-36 Score=327.33 Aligned_cols=270 Identities=17% Similarity=0.224 Sum_probs=199.4
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC--CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK--KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
..++|+..+.||+|+||.||+|+.. +|+.||||++.... ......+.+|+.+++.++||||+++++++...... ..
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~~ 97 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSL-EE 97 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCc-cc
Confidence 4568999999999999999999975 68999999997542 22345688999999999999999999998643221 11
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
....++||||+++ +|.+.+.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 98 ~~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg~a 170 (359)
T cd07876 98 FQDVYLVMELMDA-NLCQVIHM---ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 170 (359)
T ss_pred cceeEEEEeCCCc-CHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCCCc
Confidence 2347999999975 66666643 478899999999999999999999 9999999999999999999999999998
Q ss_pred hhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccccc--------
Q 004195 635 LLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTD-------- 704 (769)
Q Consensus 635 ~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~-------- 704 (769)
+....... ....++..|++||.+.+..++.++|||||||++|||+||+.||....... ....... .+..
T Consensus 171 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 249 (359)
T cd07876 171 RTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQ-LGTPSAEFMNRL 249 (359)
T ss_pred cccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh-cCCCcHHHHHHH
Confidence 65432221 22234556788999888899999999999999999999999997543211 1111100 0000
Q ss_pred -----------cc-----cccccCcccc---CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 705 -----------EA-----RKSIVDPAVM---NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 705 -----------~~-----~~~~~d~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.. ..+....-.. ..........+.+++.+|++.||++|||++|+++|+|+..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 320 (359)
T cd07876 250 QPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV 320 (359)
T ss_pred HHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence 00 0000000000 0001112345889999999999999999999999999864
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=321.15 Aligned_cols=253 Identities=23% Similarity=0.370 Sum_probs=193.5
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCc--EEEEEEccccC-CCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGT--LVAIRSLKMSK-KSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~--~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~ 554 (769)
++|+..+.||+|+||.||+|+.+ ++. .+|+|.++... ......+.+|++++.++ +||||+++++++.+.+.
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~---- 82 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY---- 82 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCC----
Confidence 46778899999999999999965 454 46788776432 22335788999999999 89999999999876443
Q ss_pred cceEEEEEeccCCCchhhhhcCCC---------------CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCcccccee
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPG---------------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVL 619 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NIL 619 (769)
.++||||+++|+|.+++++.. ..+++.+++.++.|+++|++|||+. +|+||||||+|||
T Consensus 83 ---~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nil 156 (303)
T cd05088 83 ---LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNIL 156 (303)
T ss_pred ---ceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEE
Confidence 799999999999999986321 2578999999999999999999998 9999999999999
Q ss_pred eCCCceeeecCCCCchhhhccCCcc-eeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhh
Q 004195 620 LDENFHVKINSYNLPLLAEARGKGS-AEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLL 697 (769)
Q Consensus 620 ld~~~~~kl~DFGla~~~~~~~~~~-~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~ 697 (769)
+++++.+||+|||+++......... ......|++||......++.++|||||||++|||+| |..||............
T Consensus 157 i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~ 236 (303)
T cd05088 157 VGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 236 (303)
T ss_pred ecCCCcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHH
Confidence 9999999999999985332111111 111234678888877788999999999999999998 99998654332222111
Q ss_pred hhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 698 QVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 698 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
... ..+...... ...+.+++.+||+.+|++||+++++++++....
T Consensus 237 ~~~----------~~~~~~~~~----~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~ 281 (303)
T cd05088 237 PQG----------YRLEKPLNC----DDEVYDLMRQCWREKPYERPSFAQILVSLNRML 281 (303)
T ss_pred hcC----------CcCCCCCCC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 100 001111112 234889999999999999999999999987553
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-37 Score=327.27 Aligned_cols=244 Identities=16% Similarity=0.202 Sum_probs=190.5
Q ss_pred CccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHH-HHhhccCCceeeEeeeeeccCCCCCCcceEEE
Q 004195 486 SFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIE-LISKLRHSNLVSALGHCLDFSLDDPSISIIYL 560 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~-~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~l 560 (769)
+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|.. +++.++||||+++++++.+.+ ..++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~-------~~~l 73 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTE-------KLYF 73 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCC-------EEEE
Confidence 46999999999999965 79999999997542 122344556655 467789999999999887643 3899
Q ss_pred EEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhcc
Q 004195 561 IFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEAR 640 (769)
Q Consensus 561 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~ 640 (769)
||||+++|+|.+++.... .+++..+..++.||++||+|||+. +|+||||||+|||+++++.+||+|||+++.....
T Consensus 74 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~ 149 (325)
T cd05604 74 VLDFVNGGELFFHLQRER-SFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ 149 (325)
T ss_pred EEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCC
Confidence 999999999999887544 689999999999999999999998 9999999999999999999999999998643211
Q ss_pred --CCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHH-HhhhhhccccccccccccCccccC
Q 004195 641 --GKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLV-KDLLQVNIGTDEARKSIVDPAVMN 717 (769)
Q Consensus 641 --~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~ 717 (769)
......++..|++||.+.+..++.++|||||||++|||++|++||........ ...... ......
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~------------~~~~~~ 217 (325)
T cd05604 150 SDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHK------------PLVLRP 217 (325)
T ss_pred CCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcC------------CccCCC
Confidence 12222345567889998888899999999999999999999999976543222 111110 001111
Q ss_pred CCCHHHHHHHHHHHHHcCcCCCCCCCCH----HHHHHHhHhhh
Q 004195 718 ECSDESLKRMMELCLRCLSNEPKDRPSV----EDTLWNLQFAT 756 (769)
Q Consensus 718 ~~~~~~~~~l~~li~~cl~~dP~~RPs~----~evl~~l~~~~ 756 (769)
..+ ..+.+++.+|++.+|.+||++ .++++|+||..
T Consensus 218 ~~~----~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~ 256 (325)
T cd05604 218 GAS----LTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFES 256 (325)
T ss_pred CCC----HHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCC
Confidence 222 347889999999999999976 58999999863
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=322.10 Aligned_cols=256 Identities=16% Similarity=0.256 Sum_probs=203.1
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
.+|...+.||+|+||.||+|+.. +++.||+|.+........+.+.+|+.+++.++||||+++++++.... ..
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-------~~ 91 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD-------EL 91 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCC-------EE
Confidence 56888899999999999999964 79999999997655555677889999999999999999999997643 48
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
++||||+++++|.+++.+. .+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++....
T Consensus 92 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~ 166 (297)
T cd06656 92 WVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 166 (297)
T ss_pred EEeecccCCCCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEcc
Confidence 9999999999999998754 589999999999999999999998 99999999999999999999999999986543
Q ss_pred ccCC--cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCcccc
Q 004195 639 ARGK--GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM 716 (769)
Q Consensus 639 ~~~~--~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 716 (769)
.... ........|.+||...+..++.++|||||||++|+++||++||.......... .... . . .+.
T Consensus 167 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~--~~~~-~--~-----~~~-- 234 (297)
T cd06656 167 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY--LIAT-N--G-----TPE-- 234 (297)
T ss_pred CCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee--eecc-C--C-----CCC--
Confidence 2221 11223445678998888888999999999999999999999986533211100 0000 0 0 000
Q ss_pred CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 717 NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 717 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
...+......+.+++.+||+.+|++||+++++++|+|+....+
T Consensus 235 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 277 (297)
T cd06656 235 LQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKP 277 (297)
T ss_pred CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhccccc
Confidence 0111222344788999999999999999999999999875544
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=319.60 Aligned_cols=257 Identities=19% Similarity=0.301 Sum_probs=201.3
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
.++|+..+.||+|+||.||+|+.. ++..||+|.+........+.+.+|++++++++||||+++++++.+.. .
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-------~ 76 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYEN-------K 76 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCC-------e
Confidence 356788899999999999999975 68999999997554444567889999999999999999999987643 3
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.++||||+++++|.+++......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~ 153 (280)
T cd06611 77 LWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKN 153 (280)
T ss_pred EEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhh
Confidence 8999999999999999986555799999999999999999999999 9999999999999999999999999988554
Q ss_pred hccCC--cceeecCCCcchhhhc-----cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccc
Q 004195 638 EARGK--GSAEVSSPAKKTSVLA-----RTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSI 710 (769)
Q Consensus 638 ~~~~~--~~~~~~~~~~~pe~~~-----~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (769)
..... ........|.+||... ...++.++|||||||++|||++|++||...........+.. ..
T Consensus 154 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~------- 224 (280)
T cd06611 154 KSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILK--SE------- 224 (280)
T ss_pred cccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhc--CC-------
Confidence 32211 1122344567788753 34568899999999999999999999875432211111110 00
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 711 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.+.+ ..+......+.+++.+||+.+|++||++.++++|+|+...
T Consensus 225 -~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (280)
T cd06611 225 -PPTL--DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ 268 (280)
T ss_pred -CCCc--CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence 0110 0111223348899999999999999999999999998765
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-36 Score=310.65 Aligned_cols=241 Identities=17% Similarity=0.234 Sum_probs=189.6
Q ss_pred ccccCCceeEEEEEeC---CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEE
Q 004195 487 FMCDASHGQIYKGKLT---DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLI 561 (769)
Q Consensus 487 ~iG~G~~g~Vy~~~~~---~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV 561 (769)
.||+|+||.||+|.++ ++..+|+|+++..... ..+++.+|+.++++++||||+++++++... ..++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--------~~~lv 73 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAE--------SWMLV 73 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCC--------CcEEE
Confidence 5899999999999753 5789999998754322 245788999999999999999999988532 26899
Q ss_pred EeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhccC
Q 004195 562 FEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARG 641 (769)
Q Consensus 562 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~~ 641 (769)
|||+++|+|.+++.... .+++..+.+++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 74 ~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~ 149 (257)
T cd05116 74 MELAELGPLNKFLQKNK-HVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADE 149 (257)
T ss_pred EecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCC
Confidence 99999999999997544 689999999999999999999998 99999999999999999999999999986553322
Q ss_pred Cc-----ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCccc
Q 004195 642 KG-----SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAV 715 (769)
Q Consensus 642 ~~-----~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 715 (769)
.. .......|++||......++.++|||||||++|||+| |++||...........+.... .+..
T Consensus 150 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~----------~~~~ 219 (257)
T cd05116 150 NYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGE----------RMEC 219 (257)
T ss_pred CeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCC----------CCCC
Confidence 11 0111235677888877788999999999999999998 999987644333222222110 0111
Q ss_pred cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 716 MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 716 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
...++ .++.+++.+||+.||++||++++|.+.+.
T Consensus 220 ~~~~~----~~l~~li~~~~~~~p~~Rp~~~~i~~~l~ 253 (257)
T cd05116 220 PQRCP----PEMYDLMKLCWTYGVDERPGFAVVELRLR 253 (257)
T ss_pred CCCCC----HHHHHHHHHHhccCchhCcCHHHHHHHHh
Confidence 12233 34889999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-36 Score=315.06 Aligned_cols=251 Identities=19% Similarity=0.334 Sum_probs=196.2
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CC---cEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DG---TLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g---~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
++|+..+.||+|+||.||+|+.. ++ ..+|+|.++.... ...+.+.+|++++++++||||+++++++.+.+.
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~---- 80 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKP---- 80 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCC----
Confidence 46778899999999999999975 33 3799999875422 224568899999999999999999999976443
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
.++||||+++++|.+++......+++.++..++.|++.|++|||+. +++||||||+||++++++.+|++|||++
T Consensus 81 ---~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~ 154 (268)
T cd05063 81 ---AMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLS 154 (268)
T ss_pred ---cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccc
Confidence 7999999999999999986555789999999999999999999998 9999999999999999999999999998
Q ss_pred hhhhccCCccee-----ecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccc
Q 004195 635 LLAEARGKGSAE-----VSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARK 708 (769)
Q Consensus 635 ~~~~~~~~~~~~-----~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (769)
............ ....|.+||......++.++|||||||++|||+| |+.||...........+....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~------- 227 (268)
T cd05063 155 RVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGF------- 227 (268)
T ss_pred eecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCC-------
Confidence 654322211111 1123678888887889999999999999999998 999986543322222111100
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
..| ....++ ..+.+++.+||+.+|++||++.+|++.+..
T Consensus 228 --~~~-~~~~~~----~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~ 266 (268)
T cd05063 228 --RLP-APMDCP----SAVYQLMLQCWQQDRARRPRFVDIVNLLDK 266 (268)
T ss_pred --CCC-CCCCCC----HHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 001 011223 348899999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-36 Score=319.43 Aligned_cols=254 Identities=18% Similarity=0.292 Sum_probs=202.8
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
+|+..+.||.|++|.||+|+.. +|+.||+|.+........+.+.+|+.+++.++||||+++++++.+.. ..+
T Consensus 20 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-------~~~ 92 (296)
T cd06655 20 KYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGD-------ELF 92 (296)
T ss_pred eEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCc-------eEE
Confidence 5778899999999999999864 78999999997655555677899999999999999999999987633 489
Q ss_pred EEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhc
Q 004195 560 LIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEA 639 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~ 639 (769)
+|+||+++++|.+++... .+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus 93 lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~ 167 (296)
T cd06655 93 VVMEYLAGGSLTDVVTET--CMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITP 167 (296)
T ss_pred EEEEecCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhccc
Confidence 999999999999998754 589999999999999999999998 999999999999999999999999999865433
Q ss_pred cCC--cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccC
Q 004195 640 RGK--GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMN 717 (769)
Q Consensus 640 ~~~--~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 717 (769)
... ........|++||......++.++|||||||++|||++|++||............... . . +.+
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~--~---~-----~~~-- 235 (296)
T cd06655 168 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN--G---T-----PEL-- 235 (296)
T ss_pred ccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc--C---C-----ccc--
Confidence 221 1123344677899888888999999999999999999999998764322111111100 0 0 000
Q ss_pred CCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 718 ECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 718 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
..+......+.+++.+||..||++||++.++++|+|+....
T Consensus 236 ~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~ 276 (296)
T cd06655 236 QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAK 276 (296)
T ss_pred CCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhcc
Confidence 01112223488899999999999999999999999997543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-36 Score=313.93 Aligned_cols=254 Identities=16% Similarity=0.223 Sum_probs=197.9
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC---hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS---PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~---~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|+..+.||+|+||.||+|+.. +++.||||.+....... ...+.+|++++++++||||+++++++.+.+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------ 75 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDN------ 75 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECC------
Confidence 47888999999999999999965 78999999886533222 346888999999999999999999987643
Q ss_pred ceEEEEEeccCCCchhhhhc---CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCC
Q 004195 556 SIIYLIFEYAPNETLRSFIS---GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYN 632 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFG 632 (769)
..++|+||+++|+|.+++. .....+++..+..++.|+++||+|||+. +++||||||+||+++.++.++++|||
T Consensus 76 -~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g 151 (267)
T cd08228 76 -ELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred -eEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccc
Confidence 3799999999999998885 2234588999999999999999999998 99999999999999999999999999
Q ss_pred CchhhhccCC--cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccc
Q 004195 633 LPLLAEARGK--GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSI 710 (769)
Q Consensus 633 la~~~~~~~~--~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (769)
++........ ........|++||...+..++.++||||||+++|||+||+.|+........ .+... .. ..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~-~~~~~-~~------~~ 223 (267)
T cd08228 152 LGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLF-SLCQK-IE------QC 223 (267)
T ss_pred cceeccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHH-HHHHH-Hh------cC
Confidence 9865432221 112233457789988888889999999999999999999999865432111 11111 00 00
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 711 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
..+. .........+.+++.+||+.+|++||++.||++.+..
T Consensus 224 ~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~ 264 (267)
T cd08228 224 DYPP---LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQ 264 (267)
T ss_pred CCCC---CChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHH
Confidence 0111 1122334558999999999999999999999998864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=317.61 Aligned_cols=251 Identities=19% Similarity=0.274 Sum_probs=195.2
Q ss_pred hcCCCCcCccccCCceeEEEEEeC------CCcEEEEEEccccCCC-ChhHHHHHHHHHhhccCCceeeEeeeeeccCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT------DGTLVAIRSLKMSKKS-SPHMYTYHIELISKLRHSNLVSALGHCLDFSLD 551 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~ 551 (769)
+++|...+.||+|++|.||+|... .+..||+|.+...... ....+.+|+.++++++|+||+++++++.+...
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~- 83 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP- 83 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC-
Confidence 467888999999999999999864 3568999988744322 23568999999999999999999998876443
Q ss_pred CCCcceEEEEEeccCCCchhhhhcCCC------CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc-
Q 004195 552 DPSISIIYLIFEYAPNETLRSFISGPG------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF- 624 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~- 624 (769)
.++||||+++++|.+++.... ..++|..+.+++.||++||+|||+. +++||||||+||+++.++
T Consensus 84 ------~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~ 154 (277)
T cd05036 84 ------RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGP 154 (277)
T ss_pred ------cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCC
Confidence 689999999999999987432 2589999999999999999999998 999999999999998754
Q ss_pred --eeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhh
Q 004195 625 --HVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLL 697 (769)
Q Consensus 625 --~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~ 697 (769)
.+|++|||+++....... ........|++||.+.+..++.++|||||||++|||++ |+.||...........+
T Consensus 155 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~ 234 (277)
T cd05036 155 GRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFV 234 (277)
T ss_pred CcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 599999999875532111 11111234778999888889999999999999999997 99998764433222221
Q ss_pred hhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 698 QVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 698 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
... . .+.....+ +..+.+++.+|++.+|++||++.+|++++.
T Consensus 235 ~~~---~-------~~~~~~~~----~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 235 TGG---G-------RLDPPKGC----PGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HcC---C-------cCCCCCCC----CHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 110 0 01111222 345889999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-36 Score=310.41 Aligned_cols=243 Identities=19% Similarity=0.318 Sum_probs=192.1
Q ss_pred CccccCCceeEEEEEeCCCcEEEEEEccccCCC-ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEEEec
Q 004195 486 SFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKS-SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEY 564 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV~Ey 564 (769)
+.||+|+||.||+|...++..||+|.++..... ....+.+|++++++++||||++++++|.+... .++||||
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-------~~lv~e~ 73 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQP-------IYIVMEL 73 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCc-------cEEEEEC
Confidence 368999999999999888899999998754322 23468899999999999999999999976433 7999999
Q ss_pred cCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhccCCc-
Q 004195 565 APNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKG- 643 (769)
Q Consensus 565 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~- 643 (769)
+++++|.+++......+++..+..++.|++.||.|+|+. +++||||||+||++++++.+|++|||++.........
T Consensus 74 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~ 150 (250)
T cd05085 74 VPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSS 150 (250)
T ss_pred CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceecccccccc
Confidence 999999999975555689999999999999999999998 9999999999999999999999999998644322111
Q ss_pred --ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCccccCCCC
Q 004195 644 --SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECS 720 (769)
Q Consensus 644 --~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 720 (769)
.......|.+||......++.++|||||||++||+++ |..||...........+... ........
T Consensus 151 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~----------~~~~~~~~-- 218 (250)
T cd05085 151 SGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKG----------YRMSCPQK-- 218 (250)
T ss_pred CCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC----------CCCCCCCC--
Confidence 1111234778998888889999999999999999998 99898654332222211110 00111112
Q ss_pred HHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHh
Q 004195 721 DESLKRMMELCLRCLSNEPKDRPSVEDTLWNL 752 (769)
Q Consensus 721 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 752 (769)
.+..+.+++.+|++.+|++||++.|+++.+
T Consensus 219 --~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l 248 (250)
T cd05085 219 --CPDDVYKVMQRCWDYKPENRPKFSELQKEL 248 (250)
T ss_pred --CCHHHHHHHHHHcccCcccCCCHHHHHHHh
Confidence 234589999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=319.02 Aligned_cols=255 Identities=15% Similarity=0.194 Sum_probs=198.8
Q ss_pred CCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC---CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 482 FDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK---SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
|+..+.||+|+||+||+|+.. +++.||+|.+..... .....+.+|++++++++|+||+++.+++.+.+ .
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~-------~ 74 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKD-------A 74 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCC-------E
Confidence 556788999999999999975 789999999875432 22345788999999999999999998887643 3
Q ss_pred EEEEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 558 IYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
.++||||+++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++..
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~ 151 (285)
T cd05632 75 LCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVK 151 (285)
T ss_pred EEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCccee
Confidence 89999999999999888632 33699999999999999999999998 999999999999999999999999999865
Q ss_pred hhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccc
Q 004195 637 AEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAV 715 (769)
Q Consensus 637 ~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 715 (769)
...... ....+...|++||...+..++.++|||||||++|||+||+.||...........+....... .+..
T Consensus 152 ~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~-------~~~~ 224 (285)
T cd05632 152 IPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLET-------EEVY 224 (285)
T ss_pred cCCCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcc-------cccc
Confidence 432211 12234556788999888889999999999999999999999997543221111111111000 0111
Q ss_pred cCCCCHHHHHHHHHHHHHcCcCCCCCCCC-----HHHHHHHhHhhhh
Q 004195 716 MNECSDESLKRMMELCLRCLSNEPKDRPS-----VEDTLWNLQFATQ 757 (769)
Q Consensus 716 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~l~~~~~ 757 (769)
...+ ...+.+++.+|++.||++||+ +++++.|.|+...
T Consensus 225 ~~~~----~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05632 225 SAKF----SEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNM 267 (285)
T ss_pred CccC----CHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcC
Confidence 1222 334789999999999999999 8899999998654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=329.96 Aligned_cols=261 Identities=16% Similarity=0.249 Sum_probs=200.6
Q ss_pred HHHHHHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeeeec
Q 004195 472 LDELKEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHCLD 547 (769)
Q Consensus 472 ~~el~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~ 547 (769)
+.++....++|+..+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 3455556688999999999999999999976 68899999986432 2223457889999999999999999999876
Q ss_pred cCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceee
Q 004195 548 FSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVK 627 (769)
Q Consensus 548 ~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~k 627 (769)
.. ..++||||+++|+|.+++... .++...+..++.|++.||+|||+. +|+||||||+|||++.++.+|
T Consensus 115 ~~-------~~~lv~Ey~~gg~L~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ik 182 (371)
T cd05622 115 DR-------YLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLK 182 (371)
T ss_pred CC-------EEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEE
Confidence 33 489999999999999999754 478888999999999999999999 999999999999999999999
Q ss_pred ecCCCCchhhhccCC---cceeecCCCcchhhhccC----CCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhh
Q 004195 628 INSYNLPLLAEARGK---GSAEVSSPAKKTSVLART----EQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQV 699 (769)
Q Consensus 628 l~DFGla~~~~~~~~---~~~~~~~~~~~pe~~~~~----~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~ 699 (769)
|+|||+++....... ....++..|++||.+... .++.++|||||||++|||++|++||....... ...+...
T Consensus 183 L~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~ 262 (371)
T cd05622 183 LADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNH 262 (371)
T ss_pred EEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Confidence 999999865533221 123345667889987543 37899999999999999999999997654322 2221110
Q ss_pred ccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCC--CCCHHHHHHHhHhhh
Q 004195 700 NIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKD--RPSVEDTLWNLQFAT 756 (769)
Q Consensus 700 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~l~~~~ 756 (769)
.. ...+.+ .... ...+.+++.+|+..++.+ ||+++|+++|+|+..
T Consensus 263 ----~~-~~~~~~---~~~~----s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~ 309 (371)
T cd05622 263 ----KN-SLTFPD---DNDI----SKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKN 309 (371)
T ss_pred ----CC-cccCCC---cCCC----CHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCC
Confidence 00 000000 0122 334888999999854443 789999999999854
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=317.70 Aligned_cols=252 Identities=19% Similarity=0.255 Sum_probs=194.7
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC------CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCC
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT------DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~ 550 (769)
++++|+..+.||+|+||.||+|... ++..||||++..... ....++.+|+.++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~- 82 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ- 82 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC-
Confidence 4567899999999999999999753 356899999864322 22356889999999999999999999987543
Q ss_pred CCCCcceEEEEEeccCCCchhhhhcCC---------CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeC
Q 004195 551 DDPSISIIYLIFEYAPNETLRSFISGP---------GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD 621 (769)
Q Consensus 551 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~---------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld 621 (769)
..++||||+++|+|.+++.+. ...++|..+..++.|+++||+|||+. +++||||||+||+++
T Consensus 83 ------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~ 153 (277)
T cd05062 83 ------PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVA 153 (277)
T ss_pred ------CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEc
Confidence 379999999999999998632 12468889999999999999999998 999999999999999
Q ss_pred CCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhh
Q 004195 622 ENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDL 696 (769)
Q Consensus 622 ~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~ 696 (769)
+++.+|++|||+++....... ........|++||.+....++.++|||||||++|||++ |..|+...........
T Consensus 154 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~ 233 (277)
T cd05062 154 EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRF 233 (277)
T ss_pred CCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 999999999999864422111 11112235788998888889999999999999999999 6888865443322221
Q ss_pred hhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 697 LQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 697 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
.... .. +......+ ..+.+++.+|++.+|++|||+.|+++++.
T Consensus 234 ~~~~-----~~-----~~~~~~~~----~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 234 VMEG-----GL-----LDKPDNCP----DMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred HHcC-----Cc-----CCCCCCCC----HHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 1110 00 01112223 34889999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=319.38 Aligned_cols=253 Identities=20% Similarity=0.301 Sum_probs=198.0
Q ss_pred CCCCcCccccCCceeEEEEEeC------CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT------DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
+|...+.||+|+||.||+|+.. ++..+|+|.+........+.+.+|++++++++||||+++++++.+...
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~---- 81 (291)
T cd05094 6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDP---- 81 (291)
T ss_pred HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCc----
Confidence 4667789999999999999742 356799999875544444679999999999999999999999976433
Q ss_pred cceEEEEEeccCCCchhhhhcCCC---------------CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCcccccee
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPG---------------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVL 619 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NIL 619 (769)
.++||||+++++|.+++.... ..++|..++.++.|++.||+|||+. +|+||||||+||+
T Consensus 82 ---~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil 155 (291)
T cd05094 82 ---LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCL 155 (291)
T ss_pred ---eEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEE
Confidence 799999999999999996322 2489999999999999999999999 9999999999999
Q ss_pred eCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHH
Q 004195 620 LDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVK 694 (769)
Q Consensus 620 ld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~ 694 (769)
++.++.+||+|||++........ ........|++||......++.++|||||||++|||+| |+.||.........
T Consensus 156 ~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~ 235 (291)
T cd05094 156 VGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVI 235 (291)
T ss_pred EccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 99999999999999865432211 11122345778998888889999999999999999999 99998654432222
Q ss_pred hhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 695 DLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 695 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
..+... .. +..... .+..+.+++.+||+.+|++||++++|++.+.....
T Consensus 236 ~~~~~~-----~~-----~~~~~~----~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~ 284 (291)
T cd05094 236 ECITQG-----RV-----LERPRV----CPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK 284 (291)
T ss_pred HHHhCC-----CC-----CCCCcc----CCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence 211100 00 001111 23448899999999999999999999999987643
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-36 Score=326.82 Aligned_cols=274 Identities=16% Similarity=0.252 Sum_probs=201.8
Q ss_pred HHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC--CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCC
Q 004195 476 KEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK--SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD 552 (769)
Q Consensus 476 ~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~ 552 (769)
....++|...+.||+|+||.||+|... +++.||||++..... ...+.+.+|++++++++||||+++++++......
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~- 89 (343)
T cd07878 11 WEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSI- 89 (343)
T ss_pred hhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccc-
Confidence 345678999999999999999999965 688999999875422 2235677899999999999999999988643221
Q ss_pred CCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCC
Q 004195 553 PSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYN 632 (769)
Q Consensus 553 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFG 632 (769)
......++++|++ +++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 90 ~~~~~~~~~~~~~-~~~l~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg 163 (343)
T cd07878 90 ENFNEVYLVTNLM-GADLNNIVKCQ--KLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFG 163 (343)
T ss_pred cccCcEEEEeecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCCc
Confidence 1224579999998 68999888643 589999999999999999999998 99999999999999999999999999
Q ss_pred CchhhhccCCcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhcccc-cccccc
Q 004195 633 LPLLAEARGKGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIGT-DEARKS 709 (769)
Q Consensus 633 la~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~~-~~~~~~ 709 (769)
+++...... ....++..|++||.+.+ ..++.++|||||||++|||++|+.||...... ....+....... .+....
T Consensus 164 ~~~~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (343)
T cd07878 164 LARQADDEM-TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKK 242 (343)
T ss_pred cceecCCCc-CCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 987654322 22234556788988765 46899999999999999999999998754322 121111110000 000000
Q ss_pred cc--------C--ccccCC----CCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 710 IV--------D--PAVMNE----CSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 710 ~~--------d--~~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
+. . +..... ........+.+++.+|++.||++|||+.|++.|+||...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~ 304 (343)
T cd07878 243 ISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQY 304 (343)
T ss_pred cchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhcc
Confidence 00 0 000000 000112347899999999999999999999999999864
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-36 Score=312.05 Aligned_cols=248 Identities=25% Similarity=0.369 Sum_probs=196.4
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
++|...+.||+|+||.||+|+..++..||+|+++... ...+.+.+|++++++++||||+++++++.+. ..+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~--------~~~ 76 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE--------PIY 76 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEECCC--------CcE
Confidence 4578889999999999999998766789999997533 3456799999999999999999999987532 268
Q ss_pred EEEeccCCCchhhhhcC-CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 560 LIFEYAPNETLRSFISG-PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
+||||+++|+|.+++.+ .+..+++..+..++.|+++||+|+|+. +++||||||+||++++++.+||+|||.++...
T Consensus 77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~ 153 (262)
T cd05071 77 IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE 153 (262)
T ss_pred EEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeecc
Confidence 99999999999999974 334689999999999999999999998 99999999999999999999999999986554
Q ss_pred ccCCcc---eeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCcc
Q 004195 639 ARGKGS---AEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 639 ~~~~~~---~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
...... ......|++||...+..++.++|||||||++|||+| |++||............... ...
T Consensus 154 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~----------~~~- 222 (262)
T cd05071 154 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG----------YRM- 222 (262)
T ss_pred ccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcC----------CCC-
Confidence 332211 112234778998888889999999999999999999 78888654332221111100 001
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
..+.+.+..+.+++.+|++.+|++||+++++++.++
T Consensus 223 ---~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~ 258 (262)
T cd05071 223 ---PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 258 (262)
T ss_pred ---CCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHH
Confidence 112233445889999999999999999999998775
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=319.69 Aligned_cols=259 Identities=17% Similarity=0.232 Sum_probs=199.9
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|+..+.||+|+||.||+|+.. +|..||+|.++.... .....+.+|++++++++||||+++++++.... .
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-------~ 73 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEG-------A 73 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCC-------e
Confidence 35778899999999999999976 789999999875321 22357889999999999999999999887633 4
Q ss_pred EEEEEeccCCCchhhhhcCC--CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 558 IYLIFEYAPNETLRSFISGP--GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
.++||||+++++|.+++... ...+++..+..++.+++.||+|||+. .+|+||||||+||+++.++.+||+|||++.
T Consensus 74 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 151 (286)
T cd06622 74 VYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCDFGVSG 151 (286)
T ss_pred EEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCCCCEEEeecCCcc
Confidence 89999999999999998753 23689999999999999999999963 289999999999999999999999999986
Q ss_pred hhhccCCcceeecCCCcchhhhccC------CCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccccc
Q 004195 636 LAEARGKGSAEVSSPAKKTSVLART------EQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKS 709 (769)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~pe~~~~~------~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (769)
...............|.+||.+.+. .++.++|||||||++|||+||+.||.................
T Consensus 152 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~------- 224 (286)
T cd06622 152 NLVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVD------- 224 (286)
T ss_pred cccCCccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhh-------
Confidence 5533333233334457778876433 358899999999999999999999865432221111110000
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 710 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
...+. .++....++.+++.+||+.+|++||++++++.|+|+....
T Consensus 225 ~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~ 269 (286)
T cd06622 225 GDPPT----LPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYK 269 (286)
T ss_pred cCCCC----CCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhcc
Confidence 00111 2223444588999999999999999999999999987653
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-36 Score=314.59 Aligned_cols=254 Identities=20% Similarity=0.292 Sum_probs=192.3
Q ss_pred CCcCccccCCceeEEEEEeCC-Cc--EEEEEEccccCC--CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 483 DSSSFMCDASHGQIYKGKLTD-GT--LVAIRSLKMSKK--SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 483 ~~~~~iG~G~~g~Vy~~~~~~-g~--~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
...+.||+|+||.||+|+..+ +. .||+|.++.... ...+.+.+|++++++++||||++++++|...... .....
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-~~~~~ 80 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVES-EGYPS 80 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcc-cCCCC
Confidence 456889999999999999763 43 699999875422 2245688999999999999999999988643321 11234
Q ss_pred EEEEEeccCCCchhhhhc-----CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCC
Q 004195 558 IYLIFEYAPNETLRSFIS-----GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYN 632 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~-----~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFG 632 (769)
.++||||+++|+|.+++. .....+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCC
Confidence 789999999999998874 2234589999999999999999999998 99999999999999999999999999
Q ss_pred CchhhhccCC---cce-eecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhcccccccc
Q 004195 633 LPLLAEARGK---GSA-EVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEAR 707 (769)
Q Consensus 633 la~~~~~~~~---~~~-~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (769)
+++....... ... .....+++||......++.++|||||||++|||++ |++||...........+.. ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~----~~~- 232 (272)
T cd05075 158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQ----GNR- 232 (272)
T ss_pred cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc----CCC-
Confidence 9876533221 111 12234567888878889999999999999999999 7888865433222221111 000
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 708 KSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 708 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
+.....++ ..+.+++.+||+.||++|||+.|+++++..
T Consensus 233 -----~~~~~~~~----~~~~~li~~~l~~~p~~Rps~~~l~~~l~~ 270 (272)
T cd05075 233 -----LKQPPDCL----DGLYSLMSSCWLLNPKDRPSFETLRCELEK 270 (272)
T ss_pred -----CCCCCCCC----HHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 01111222 348899999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-37 Score=337.67 Aligned_cols=261 Identities=14% Similarity=0.159 Sum_probs=194.8
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
..+|.+.+.||+|+||.||+|+.. +++.||||... ...+.+|++++++++|+|||++++++.... .
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~-------~ 234 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGG-------L 234 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECC-------E
Confidence 457889999999999999999976 58899999643 234678999999999999999999987643 3
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.++||||+. ++|.+++......++|.++..|+.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 235 ~~lv~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~ 310 (461)
T PHA03211 235 TCLVLPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFA 310 (461)
T ss_pred EEEEEEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceec
Confidence 799999995 789988875555799999999999999999999998 9999999999999999999999999999765
Q ss_pred hccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCc--------hhHHHHhhhhhcccccc
Q 004195 638 EARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSEN--------VVVLVKDLLQVNIGTDE 705 (769)
Q Consensus 638 ~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~--------~~~~~~~~~~~~~~~~~ 705 (769)
..... ....++..|++||.+.+..++.++|||||||++|||++|..++... ....+..++........
T Consensus 311 ~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~ 390 (461)
T PHA03211 311 RGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVD 390 (461)
T ss_pred ccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccc
Confidence 33211 1123455778899998888999999999999999999987543211 01112222211100000
Q ss_pred ccccc----------------cCccccCCCCH---HHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 706 ARKSI----------------VDPAVMNECSD---ESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 706 ~~~~~----------------~d~~~~~~~~~---~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.+... ..+........ .....+.+|+.+||+.||++|||+.|+++|+||..
T Consensus 391 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 391 EFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred cCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 00000 00000000000 11235789999999999999999999999999853
|
|
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-36 Score=318.33 Aligned_cols=264 Identities=19% Similarity=0.288 Sum_probs=198.1
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC--CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK--SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
++|+..+.||+|++|.||+|+.+ +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+..
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~------- 73 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKR------- 73 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCC-------
Confidence 46888899999999999999976 689999999875432 22356789999999999999999999987643
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++||||+++++|..++.... .+++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||++..
T Consensus 74 ~~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 149 (286)
T cd07847 74 KLHLVFEYCDHTVLNELEKNPR-GVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARI 149 (286)
T ss_pred EEEEEEeccCccHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECcccccee
Confidence 3899999999998888876543 689999999999999999999998 999999999999999999999999999876
Q ss_pred hhccCC--cceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccc-ccccccc---
Q 004195 637 AEARGK--GSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIG-TDEARKS--- 709 (769)
Q Consensus 637 ~~~~~~--~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~-~~~~~~~--- 709 (769)
...... ........+.+||...+ ..++.++|||||||++|||+||++||.+.........+..... .......
T Consensus 150 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (286)
T cd07847 150 LTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFS 229 (286)
T ss_pred cCCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcc
Confidence 543321 11222345677887655 4578999999999999999999999875432211111111000 0000000
Q ss_pred -------ccCccccCCC-----CHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 710 -------IVDPAVMNEC-----SDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 710 -------~~d~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
...+...... .+.....+.+++.+||+.+|++||++.|++.|+||
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 230 TNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred cccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 0001000000 01123458899999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-36 Score=314.23 Aligned_cols=254 Identities=21% Similarity=0.324 Sum_probs=202.5
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC-CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK-KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|+..+.||.|++|.||+|+.. +++.||+|.+.... ......+.+|++++++++|+||+++++++.+.. .
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-------~ 73 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGS-------K 73 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECC-------e
Confidence 35778899999999999999976 68999999987543 233457889999999999999999999987643 4
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.++|+||+++++|.+++... .+++..+..++.|++.||+|||+. +++||||+|+||++++++.++++|||+++..
T Consensus 74 ~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~ 148 (274)
T cd06609 74 LWIIMEYCGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQL 148 (274)
T ss_pred EEEEEEeeCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceee
Confidence 89999999999999999854 689999999999999999999998 9999999999999999999999999998665
Q ss_pred hccC--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccc
Q 004195 638 EARG--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAV 715 (769)
Q Consensus 638 ~~~~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 715 (769)
.... .........|.+||...+..++.++|||||||++|||+||++||...........+... ..+.+
T Consensus 149 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~----------~~~~~ 218 (274)
T cd06609 149 TSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKN----------NPPSL 218 (274)
T ss_pred cccccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhc----------CCCCC
Confidence 4321 11222334578899888888999999999999999999999998654322111111100 11111
Q ss_pred cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 716 MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 716 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
... .....+.+++.+||..+|++|||++++++|+|+....
T Consensus 219 ~~~---~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~ 258 (274)
T cd06609 219 EGN---KFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAK 258 (274)
T ss_pred ccc---ccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCC
Confidence 111 0233488999999999999999999999999987643
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-36 Score=311.85 Aligned_cols=249 Identities=19% Similarity=0.372 Sum_probs=196.5
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC---------hhHHHHHHHHHhhccCCceeeEeeeeeccCC
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS---------PHMYTYHIELISKLRHSNLVSALGHCLDFSL 550 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~---------~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~ 550 (769)
+|.....||+|++|.||+|... +++.||+|.+....... .+.+.+|++++++++||||+++++++.+..
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~- 79 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDAD- 79 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC-
Confidence 3667789999999999999965 68899999887543221 145788999999999999999999987643
Q ss_pred CCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecC
Q 004195 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINS 630 (769)
Q Consensus 551 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~D 630 (769)
..++||||+++++|.+++...+ .+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|
T Consensus 80 ------~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~d 149 (267)
T cd06628 80 ------HLNIFLEYVPGGSVAALLNNYG-AFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISD 149 (267)
T ss_pred ------ccEEEEEecCCCCHHHHHHhcc-CccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecc
Confidence 3799999999999999997654 689999999999999999999998 999999999999999999999999
Q ss_pred CCCchhhhccCC--------cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccc
Q 004195 631 YNLPLLAEARGK--------GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIG 702 (769)
Q Consensus 631 FGla~~~~~~~~--------~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~ 702 (769)
||.++....... ....+...|.+||...+..++.++|||||||++|||++|+.||....... ......
T Consensus 150 fg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~~~~~-- 225 (267)
T cd06628 150 FGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ--AIFKIG-- 225 (267)
T ss_pred cCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH--HHHHHh--
Confidence 999865542111 01122345678888888888999999999999999999999987543211 111100
Q ss_pred cccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 703 TDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 703 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
....+.+.... ...+.+++.+||+.||++||++.|+++|+|+
T Consensus 226 ------~~~~~~~~~~~----~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 226 ------ENASPEIPSNI----SSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred ------ccCCCcCCccc----CHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 01112222222 3448899999999999999999999999885
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-36 Score=327.89 Aligned_cols=272 Identities=15% Similarity=0.193 Sum_probs=201.7
Q ss_pred HHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 477 EATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 477 ~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
...++|...+.||+|+||.||+|... .++.||||++...... ..+.+.+|+.+++.++||||+++++++...... .
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~ 92 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSL-E 92 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccc-c
Confidence 34578999999999999999999865 6889999999754322 235678899999999999999999988643321 1
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
.....++||||+++ ++.+.+.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 93 ~~~~~~lv~e~~~~-~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg~ 165 (355)
T cd07874 93 EFQDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 165 (355)
T ss_pred ccceeEEEhhhhcc-cHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCcc
Confidence 22357999999975 67776653 478999999999999999999998 999999999999999999999999999
Q ss_pred chhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhcccc--------
Q 004195 634 PLLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIGT-------- 703 (769)
Q Consensus 634 a~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~~-------- 703 (769)
++....... ....++..|++||.+.+..++.++|||||||++|||++|+.||...... .....+......
T Consensus 166 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (355)
T cd07874 166 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 245 (355)
T ss_pred cccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence 976533222 2233456788899988888999999999999999999999998754321 111111100000
Q ss_pred ----------ccccccccCcccc--------CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 704 ----------DEARKSIVDPAVM--------NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 704 ----------~~~~~~~~d~~~~--------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.........+... ..........+.+++.+|++.||++|||+.|+++|+|+..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~ 316 (355)
T cd07874 246 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINV 316 (355)
T ss_pred cHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhc
Confidence 0000000000000 0111122345889999999999999999999999999864
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-36 Score=317.45 Aligned_cols=253 Identities=21% Similarity=0.348 Sum_probs=196.4
Q ss_pred hcCCCCcCccccCCceeEEEEEeC------CCcEEEEEEccccCC-CChhHHHHHHHHHhhc-cCCceeeEeeeeeccCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT------DGTLVAIRSLKMSKK-SSPHMYTYHIELISKL-RHSNLVSALGHCLDFSL 550 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~ 550 (769)
.++|+..+.||+|+||.||+|... ....+|+|.+..... .....+.+|++++.++ +|+||++++++|.....
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 90 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGP 90 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCC
Confidence 346778899999999999999864 236899999875422 1234688899999999 79999999999876433
Q ss_pred CCCCcceEEEEEeccCCCchhhhhcC---------------CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccc
Q 004195 551 DDPSISIIYLIFEYAPNETLRSFISG---------------PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKI 615 (769)
Q Consensus 551 ~~~~~~~~~lV~Ey~~~gsL~~~l~~---------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp 615 (769)
.++||||+++|+|.++++. ....+++..+++++.|++.||+|||+. +|+||||||
T Consensus 91 -------~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp 160 (293)
T cd05053 91 -------LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAA 160 (293)
T ss_pred -------eEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---Cccccccce
Confidence 8999999999999999852 234689999999999999999999998 999999999
Q ss_pred cceeeCCCceeeecCCCCchhhhccCCc----ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchh
Q 004195 616 TDVLLDENFHVKINSYNLPLLAEARGKG----SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVV 690 (769)
Q Consensus 616 ~NILld~~~~~kl~DFGla~~~~~~~~~----~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~ 690 (769)
+||++++++.+|++|||+++........ .......|++||......++.++|||||||++|||++ |..|+.....
T Consensus 161 ~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 240 (293)
T cd05053 161 RNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV 240 (293)
T ss_pred eeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCH
Confidence 9999999999999999998765432211 1111234678998888889999999999999999998 8888865443
Q ss_pred HHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 691 VLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
........... .+.....+ ...+.+++.+||..||++|||+.|+++++..+
T Consensus 241 ~~~~~~~~~~~----------~~~~~~~~----~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~ 291 (293)
T cd05053 241 EELFKLLKEGY----------RMEKPQNC----TQELYHLMRDCWHEVPSQRPTFKQLVEDLDRM 291 (293)
T ss_pred HHHHHHHHcCC----------cCCCCCCC----CHHHHHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence 33222221100 01111122 33488999999999999999999999998643
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-36 Score=311.79 Aligned_cols=255 Identities=19% Similarity=0.298 Sum_probs=195.4
Q ss_pred CCCcCccccCCceeEEEEEeC-C---CcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 482 FDSSSFMCDASHGQIYKGKLT-D---GTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~-~---g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
|...+.||+|+||.||+|+.. + +..||||+++...... .+.+.+|++.++.++||||+++++++.+.... ...
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~-~~~ 79 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSL-QKI 79 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCcc-ccC
Confidence 456789999999999999864 2 3689999997543322 35788999999999999999999998753321 112
Q ss_pred ceEEEEEeccCCCchhhhhcC-----CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecC
Q 004195 556 SIIYLIFEYAPNETLRSFISG-----PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINS 630 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~-----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~D 630 (769)
...++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|
T Consensus 80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~d 156 (273)
T cd05035 80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVAD 156 (273)
T ss_pred cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECC
Confidence 347999999999999998852 223689999999999999999999998 999999999999999999999999
Q ss_pred CCCchhhhccCCc----ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhcccccc
Q 004195 631 YNLPLLAEARGKG----SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDE 705 (769)
Q Consensus 631 FGla~~~~~~~~~----~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 705 (769)
||+++........ .......|++||......++.++|||||||++|||++ |.+|+...........+...
T Consensus 157 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~----- 231 (273)
T cd05035 157 FGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHG----- 231 (273)
T ss_pred ccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----
Confidence 9998754332211 1111235677888877889999999999999999999 88888654433222211110
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 706 ARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 706 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
..+.. +...+..+.+++.+||+.||++|||+.|+++++..
T Consensus 232 -----~~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~ 271 (273)
T cd05035 232 -----NRLKQ----PEDCLDELYDLMYSCWRADPKDRPTFTKLREVLEN 271 (273)
T ss_pred -----CCCCC----CcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 01111 12233458999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-36 Score=323.07 Aligned_cols=256 Identities=16% Similarity=0.218 Sum_probs=195.5
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|+..+.||+|+||.||+++.. +++.||+|++.... ....+.+.+|+.++..++|+||+++++++.+.+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~------ 74 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDEN------ 74 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCC------
Confidence 46888999999999999999976 68999999997432 223456888999999999999999999987643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+++|+|.+++.+....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++.
T Consensus 75 -~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~ 150 (331)
T cd05597 75 -NLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCL 150 (331)
T ss_pred -eEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCcee
Confidence 48999999999999999976455789999999999999999999999 99999999999999999999999999986
Q ss_pred hhhccCC---cceeecCCCcchhhhcc-----CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccccccc
Q 004195 636 LAEARGK---GSAEVSSPAKKTSVLAR-----TEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTDEA 706 (769)
Q Consensus 636 ~~~~~~~---~~~~~~~~~~~pe~~~~-----~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~~~ 706 (769)
....... ....++..|++||.+.. ..++.++|||||||++|||++|+.||....... ...+... ..
T Consensus 151 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~----~~- 225 (331)
T cd05597 151 RLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH----KE- 225 (331)
T ss_pred ecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcC----CC-
Confidence 5432221 11234556788998752 457889999999999999999999997543222 1111110 00
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcCcCCCC--CCCCHHHHHHHhHhhh
Q 004195 707 RKSIVDPAVMNECSDESLKRMMELCLRCLSNEPK--DRPSVEDTLWNLQFAT 756 (769)
Q Consensus 707 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~--~RPs~~evl~~l~~~~ 756 (769)
...+ +......++ .+.+++.+|+..+++ .||+++++++|+|+..
T Consensus 226 ~~~~--~~~~~~~~~----~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~ 271 (331)
T cd05597 226 HFQF--PPDVTDVSE----EAKDLIRRLICSPETRLGRNGLQDFKDHPFFEG 271 (331)
T ss_pred cccC--CCccCCCCH----HHHHHHHHHccCcccccCCCCHHHHhcCCCCCC
Confidence 0000 111112233 477888887755443 4889999999999853
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-36 Score=310.93 Aligned_cols=247 Identities=21% Similarity=0.363 Sum_probs=198.5
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
++|+..+.||+|+||.||+|... |+.||+|.++.... ..+++.+|+.++++++|+||+++++++.+.+ ..+
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-------~~~ 76 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGN-------PLY 76 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCC-------CeE
Confidence 46778899999999999999875 78999999976533 4567899999999999999999999987633 389
Q ss_pred EEEeccCCCchhhhhcCCC-CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 560 LIFEYAPNETLRSFISGPG-YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
+||||+++++|.+++.... ..++|..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||.++...
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~ 153 (256)
T cd05039 77 IVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEAS 153 (256)
T ss_pred EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccccccc
Confidence 9999999999999997433 3689999999999999999999998 99999999999999999999999999987653
Q ss_pred ccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCccccC
Q 004195 639 ARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMN 717 (769)
Q Consensus 639 ~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 717 (769)
.... .......|.+||......++.++||||||+++||+++ |+.||...........+.... .+....
T Consensus 154 ~~~~-~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~----------~~~~~~ 222 (256)
T cd05039 154 QGQD-SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGY----------RMEAPE 222 (256)
T ss_pred cccc-cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCC----------CCCCcc
Confidence 2222 1222345678888877889999999999999999997 999987654333322221110 011111
Q ss_pred CCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 718 ECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 718 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
.+ +..+.+++.+||..+|++||+++|+++.+.
T Consensus 223 ~~----~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 254 (256)
T cd05039 223 GC----PPEVYKVMKDCWELDPAKRPTFKQLREQLA 254 (256)
T ss_pred CC----CHHHHHHHHHHhccChhhCcCHHHHHHHHh
Confidence 22 344889999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-36 Score=328.47 Aligned_cols=271 Identities=15% Similarity=0.175 Sum_probs=201.0
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC--CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK--KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
..++|...+.||+|+||.||+|+.. .++.||||++.... ......+.+|+.+++.++||||+++++++...... ..
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~-~~ 100 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL-EE 100 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccc-cc
Confidence 3567999999999999999999965 68899999997542 22345688899999999999999999988643221 12
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
....++||||+++ +|.+.+.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 101 ~~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a 173 (364)
T cd07875 101 FQDVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 173 (364)
T ss_pred cCeEEEEEeCCCC-CHHHHHHh---cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCCCc
Confidence 2357999999975 77777753 478999999999999999999998 9999999999999999999999999999
Q ss_pred hhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhcccccccccccc-
Q 004195 635 LLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIGTDEARKSIV- 711 (769)
Q Consensus 635 ~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~- 711 (769)
+....... ....++..|++||.+.+..++.++|||||||++|||+||+.||...... .....+.............+
T Consensus 174 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (364)
T cd07875 174 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ 253 (364)
T ss_pred cccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhh
Confidence 76543222 2223456678899998889999999999999999999999999754322 11111110000000000000
Q ss_pred ---------------------Cccc----cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 712 ---------------------DPAV----MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 712 ---------------------d~~~----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.+.. ...........+.+++.+|++.||++|||+.|+++|+|+..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~ 323 (364)
T cd07875 254 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 323 (364)
T ss_pred HHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence 0000 00011112345889999999999999999999999999864
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=316.44 Aligned_cols=238 Identities=18% Similarity=0.272 Sum_probs=183.1
Q ss_pred ccccCCceeEEEEEeCC-------------------------CcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeE
Q 004195 487 FMCDASHGQIYKGKLTD-------------------------GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSA 541 (769)
Q Consensus 487 ~iG~G~~g~Vy~~~~~~-------------------------g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l 541 (769)
.||+|+||.||+|++.. ...||+|.+..........+.+|+.++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 69999999999997421 13589999875433334578889999999999999999
Q ss_pred eeeeeccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeC
Q 004195 542 LGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD 621 (769)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld 621 (769)
+++|.+... .++||||+++|+|..++.+....+++..+.+++.|+++||+|||+. +|+||||||+||+++
T Consensus 82 ~~~~~~~~~-------~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~ 151 (274)
T cd05076 82 HGVCVRGSE-------NIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLA 151 (274)
T ss_pred EEEEEeCCc-------eEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEe
Confidence 999986443 7999999999999999976555789999999999999999999998 999999999999997
Q ss_pred CCc-------eeeecCCCCchhhhccCCcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHH-hCCCCCCCchhHH
Q 004195 622 ENF-------HVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEII-VGRPITSENVVVL 692 (769)
Q Consensus 622 ~~~-------~~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~ell-tG~~p~~~~~~~~ 692 (769)
+.+ .+|++|||.+....... ......+|++||.+.. ..++.++|||||||++||++ +|+.|+.......
T Consensus 152 ~~~~~~~~~~~~kl~d~g~~~~~~~~~--~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~ 229 (274)
T cd05076 152 RLGLAEGTSPFIKLSDPGVSFTALSRE--ERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE 229 (274)
T ss_pred ccCcccCccceeeecCCcccccccccc--ccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH
Confidence 643 37999999875432211 1223456788887654 56899999999999999985 6888886543322
Q ss_pred HHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHh
Q 004195 693 VKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNL 752 (769)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 752 (769)
........ ........ ..+.+++.+||+.+|++|||+.+|++++
T Consensus 230 ~~~~~~~~------------~~~~~~~~----~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 230 KERFYEKK------------HRLPEPSC----KELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred HHHHHHhc------------cCCCCCCC----hHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 22211110 00111112 2488999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-36 Score=310.17 Aligned_cols=248 Identities=26% Similarity=0.374 Sum_probs=197.1
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
++|+..+.||+|+||.||+|..++++.||+|.+.... ...+++.+|++++++++|+||+++++++.. + ..+
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~-------~~~ 76 (260)
T cd05067 6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVTQ-E-------PIY 76 (260)
T ss_pred HHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEcc-C-------CcE
Confidence 4678889999999999999998889999999987543 345689999999999999999999998743 1 279
Q ss_pred EEEeccCCCchhhhhcC-CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 560 LIFEYAPNETLRSFISG-PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
+||||+++++|.+++.. .+..+++.++..++.|++.||+|||+. +++||||||+||++++++.++++|||++....
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 153 (260)
T cd05067 77 IITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIE 153 (260)
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecC
Confidence 99999999999999863 334789999999999999999999998 99999999999999999999999999986554
Q ss_pred ccCCc---ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCcc
Q 004195 639 ARGKG---SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 639 ~~~~~---~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
..... .......|.+||......++.++|||||||++||+++ |++||...........+... ....
T Consensus 154 ~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~----------~~~~ 223 (260)
T cd05067 154 DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERG----------YRMP 223 (260)
T ss_pred CCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcC----------CCCC
Confidence 22111 1112234678888888889999999999999999999 99998754433222211110 0011
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
..... +.++.+++.+|++.+|++||++++++..+.
T Consensus 224 ~~~~~----~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 258 (260)
T cd05067 224 RPDNC----PEELYELMRLCWKEKPEERPTFEYLRSVLE 258 (260)
T ss_pred CCCCC----CHHHHHHHHHHccCChhhCCCHHHHHHHhh
Confidence 11122 234899999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-36 Score=322.93 Aligned_cols=257 Identities=14% Similarity=0.189 Sum_probs=195.8
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|+..+.||+|+||.||+++.+ +++.||+|.+.... ......+.+|+.++..++|+||+++++++.+.+
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~------ 74 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDEN------ 74 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCC------
Confidence 46888999999999999999976 58899999986431 222345888999999999999999999987643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+++|+|.+++.+....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 75 -~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~ 150 (332)
T cd05623 75 -NLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCL 150 (332)
T ss_pred -EEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchhe
Confidence 48999999999999999986545789999999999999999999998 99999999999999999999999999986
Q ss_pred hhhccCC---cceeecCCCcchhhhc-----cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccc
Q 004195 636 LAEARGK---GSAEVSSPAKKTSVLA-----RTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEAR 707 (769)
Q Consensus 636 ~~~~~~~---~~~~~~~~~~~pe~~~-----~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (769)
....... ....++..|++||.+. ...++.++|||||||++|||++|+.||...........+. ....
T Consensus 151 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~---~~~~-- 225 (332)
T cd05623 151 KLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM---NHKE-- 225 (332)
T ss_pred ecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHh---CCCc--
Confidence 4322211 1123455678898875 3468899999999999999999999997654322211111 0000
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcCcCCCCC--CCCHHHHHHHhHhhh
Q 004195 708 KSIVDPAVMNECSDESLKRMMELCLRCLSNEPKD--RPSVEDTLWNLQFAT 756 (769)
Q Consensus 708 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~l~~~~ 756 (769)
...-|...... ...+.+++.+|+..++++ |++++|+++|+||..
T Consensus 226 -~~~~p~~~~~~----s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~ 271 (332)
T cd05623 226 -RFQFPAQVTDV----SEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTG 271 (332)
T ss_pred -cccCCCccccC----CHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCC
Confidence 00001111122 344788888988665544 789999999999863
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-36 Score=313.57 Aligned_cols=250 Identities=18% Similarity=0.326 Sum_probs=195.7
Q ss_pred CCCCcCccccCCceeEEEEEeC-CC---cEEEEEEccccC-CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DG---TLVAIRSLKMSK-KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g---~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
+|+..+.||+|+||.||+|+.. ++ ..||||.+.... ....++|..|+.++++++||||+++++++.+..
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~------ 78 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSR------ 78 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCC------
Confidence 4677899999999999999965 33 369999987542 222457999999999999999999999987543
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+++|+|.+++......+++.++..++.|++.||+|||+. +++||||||+||+++.++.+|++|||+++
T Consensus 79 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~ 154 (269)
T cd05065 79 -PVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSR 154 (269)
T ss_pred -ceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCcccc
Confidence 37999999999999999986555789999999999999999999998 99999999999999999999999999986
Q ss_pred hhhccCCcce----ee---cCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhcccccccc
Q 004195 636 LAEARGKGSA----EV---SSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEAR 707 (769)
Q Consensus 636 ~~~~~~~~~~----~~---~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (769)
.......... .. ...|.+||......++.++|||||||++||+++ |+.||...........+....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~------ 228 (269)
T cd05065 155 FLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDY------ 228 (269)
T ss_pred ccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCC------
Confidence 5533221100 00 124678998888889999999999999999887 999987644333322221110
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 708 KSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 708 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
......+++ ..+.+++.+||+.+|++||++++|+..+..
T Consensus 229 ----~~~~~~~~~----~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 267 (269)
T cd05065 229 ----RLPPPMDCP----TALHQLMLDCWQKDRNARPKFGQIVSTLDK 267 (269)
T ss_pred ----cCCCcccCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 011112233 348899999999999999999999988653
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=317.67 Aligned_cols=251 Identities=20% Similarity=0.290 Sum_probs=198.2
Q ss_pred CCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 482 FDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
|+..+.||+|+||.||+|... +++.||+|.+..... ...+.+.+|++++++++||||+++++++.... ..+
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-------~~~ 78 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGT-------KLW 78 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCC-------ceE
Confidence 455678999999999999865 688999999874432 22356889999999999999999999987643 389
Q ss_pred EEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhc
Q 004195 560 LIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEA 639 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~ 639 (769)
+||||+++++|.+++... .+++..+..++.|+++|++|||+. +++|+||||+||++++++.+|++|||++.....
T Consensus 79 lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06642 79 IIMEYLGGGSALDLLKPG--PLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD 153 (277)
T ss_pred EEEEccCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccC
Confidence 999999999999998643 589999999999999999999998 999999999999999999999999999865433
Q ss_pred cCCc--ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccC
Q 004195 640 RGKG--SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMN 717 (769)
Q Consensus 640 ~~~~--~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 717 (769)
.... .......|.+||...+..++.++|||||||++|||+||++|+...........+. ....+.+..
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~----------~~~~~~~~~ 223 (277)
T cd06642 154 TQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIP----------KNSPPTLEG 223 (277)
T ss_pred cchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhh----------cCCCCCCCc
Confidence 2211 1123445778998888889999999999999999999999986433221111110 001111112
Q ss_pred CCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 718 ECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 718 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
.....+.+++.+||+.+|++||++.|+++|+|+..-.
T Consensus 224 ----~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 260 (277)
T cd06642 224 ----QYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYT 260 (277)
T ss_pred ----ccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHHHh
Confidence 2334588999999999999999999999999987543
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-36 Score=316.54 Aligned_cols=265 Identities=18% Similarity=0.293 Sum_probs=195.2
Q ss_pred CCCCcCccccCCceeEEEEEe-----CCCcEEEEEEccccC-CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 481 CFDSSSFMCDASHGQIYKGKL-----TDGTLVAIRSLKMSK-KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~-----~~g~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
.|.+.+.||+|+||.||+|++ .++..||+|.++... ....+.+.+|++++++++||||+++++++.+.+.
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~---- 80 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGG---- 80 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCC----
Confidence 467789999999999999984 257899999987543 2224578999999999999999999999876322
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
...++||||+++++|.+++.+....++|..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++
T Consensus 81 -~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~ 156 (284)
T cd05079 81 -NGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLT 156 (284)
T ss_pred -CceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCccc
Confidence 237999999999999999975545689999999999999999999998 9999999999999999999999999998
Q ss_pred hhhhccCC-----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccc--cccc
Q 004195 635 LLAEARGK-----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGT--DEAR 707 (769)
Q Consensus 635 ~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~--~~~~ 707 (769)
+....... ........|++||...+..++.++|||||||++|||+|++.|......... ......... ....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 235 (284)
T cd05079 157 KAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFL-KMIGPTHGQMTVTRL 235 (284)
T ss_pred cccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhh-hhcccccccccHHHH
Confidence 65533221 111223356789988878899999999999999999998866432111000 000000000 0000
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 708 KSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 708 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
............+...+..+.+++.+|++.+|++|||++++++.+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 282 (284)
T cd05079 236 VRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEA 282 (284)
T ss_pred HHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHh
Confidence 00000000001111233458999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-36 Score=317.33 Aligned_cols=254 Identities=19% Similarity=0.284 Sum_probs=198.2
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
+.|+..+.||+|+||.||+|+.. +++.||+|.+........+.+.+|++++++++||||+++++++.... ..
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-------~~ 84 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDG-------KL 84 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCC-------eE
Confidence 45777899999999999999976 58999999997654444567889999999999999999999987543 38
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
++||||+++++|..++.+....+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++....
T Consensus 85 ~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 161 (292)
T cd06644 85 WIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNV 161 (292)
T ss_pred EEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceecc
Confidence 999999999999988875545799999999999999999999998 99999999999999999999999999875432
Q ss_pred ccCC--cceeecCCCcchhhhc-----cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccccccccccc
Q 004195 639 ARGK--GSAEVSSPAKKTSVLA-----RTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTDEARKSI 710 (769)
Q Consensus 639 ~~~~--~~~~~~~~~~~pe~~~-----~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~ 710 (769)
.... ........|.+||.+. ...++.++|||||||++|||++|++|+....... ...+.. .
T Consensus 162 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~----~------- 230 (292)
T cd06644 162 KTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAK----S------- 230 (292)
T ss_pred ccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhc----C-------
Confidence 2111 1122334567787663 3457889999999999999999999986543221 111110 0
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 711 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
..+.. ..+.....++.+++.+||+.+|++||+++|+++|+|+..
T Consensus 231 ~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 274 (292)
T cd06644 231 EPPTL--SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSS 274 (292)
T ss_pred CCccC--CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 00110 011223345889999999999999999999999999864
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-36 Score=323.07 Aligned_cols=244 Identities=15% Similarity=0.187 Sum_probs=188.5
Q ss_pred CccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHH-HHhhccCCceeeEeeeeeccCCCCCCcceEEE
Q 004195 486 SFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIE-LISKLRHSNLVSALGHCLDFSLDDPSISIIYL 560 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~-~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~l 560 (769)
+.||+|+||+||+|+.. +++.||+|++.... ......+.+|.. +++.++||||+++++++.+.+ ..++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~-------~~~l 73 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD-------KLYF 73 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCC-------eEEE
Confidence 46999999999999976 68899999997532 122234444544 567889999999999987643 3899
Q ss_pred EEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhcc
Q 004195 561 IFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEAR 640 (769)
Q Consensus 561 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~ 640 (769)
||||+++|+|.+++.... .+++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 74 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~ 149 (325)
T cd05602 74 VLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 149 (325)
T ss_pred EEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccC
Confidence 999999999999997544 578888889999999999999998 9999999999999999999999999998643211
Q ss_pred --CCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccCC
Q 004195 641 --GKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNE 718 (769)
Q Consensus 641 --~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 718 (769)
......++..|++||.+.+..++.++|||||||++|||++|++||...........+.. . .......
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~---~--------~~~~~~~ 218 (325)
T cd05602 150 NGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN---K--------PLQLKPN 218 (325)
T ss_pred CCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHh---C--------CcCCCCC
Confidence 12223345677889999888899999999999999999999999976443222111110 0 0011122
Q ss_pred CCHHHHHHHHHHHHHcCcCCCCCCCCHH----HHHHHhHhh
Q 004195 719 CSDESLKRMMELCLRCLSNEPKDRPSVE----DTLWNLQFA 755 (769)
Q Consensus 719 ~~~~~~~~l~~li~~cl~~dP~~RPs~~----evl~~l~~~ 755 (769)
.+ ..+.+++.+|++.||.+||++. ++.+|+|+.
T Consensus 219 ~~----~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~ 255 (325)
T cd05602 219 IT----NSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFS 255 (325)
T ss_pred CC----HHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccC
Confidence 23 3488999999999999999865 888888864
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-36 Score=320.84 Aligned_cols=259 Identities=20% Similarity=0.286 Sum_probs=186.7
Q ss_pred cCccccCCceeEEEEEeC---CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEE
Q 004195 485 SSFMCDASHGQIYKGKLT---DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLI 561 (769)
Q Consensus 485 ~~~iG~G~~g~Vy~~~~~---~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV 561 (769)
...||+|+||+||+|+.. +++.||+|.+.... ....+.+|++++++++||||+++++++.+.. ....++|
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~~~~lv 78 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHA-----DRKVWLL 78 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCC-----CcEEEEE
Confidence 468999999999999864 46789999987432 2356789999999999999999999886432 2358999
Q ss_pred EeccCCCchhhhhcC--------CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceee----CCCceeeec
Q 004195 562 FEYAPNETLRSFISG--------PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLL----DENFHVKIN 629 (769)
Q Consensus 562 ~Ey~~~gsL~~~l~~--------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl----d~~~~~kl~ 629 (769)
|||++ ++|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+
T Consensus 79 ~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~ 154 (317)
T cd07868 79 FDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIA 154 (317)
T ss_pred EeccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEe
Confidence 99996 588887752 123588999999999999999999998 99999999999999 456889999
Q ss_pred CCCCchhhhccC-----CcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchh----------HHH
Q 004195 630 SYNLPLLAEARG-----KGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVV----------VLV 693 (769)
Q Consensus 630 DFGla~~~~~~~-----~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~----------~~~ 693 (769)
|||+++...... .....++..|++||.+.+ ..++.++||||+||++|||+||++||..... ...
T Consensus 155 DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~ 234 (317)
T cd07868 155 DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQL 234 (317)
T ss_pred ecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHH
Confidence 999997653321 112234456788998766 4589999999999999999999999864221 111
Q ss_pred Hhhhhhc-cccccccccc------------cCccccCCC---------CHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHH
Q 004195 694 KDLLQVN-IGTDEARKSI------------VDPAVMNEC---------SDESLKRMMELCLRCLSNEPKDRPSVEDTLWN 751 (769)
Q Consensus 694 ~~~~~~~-~~~~~~~~~~------------~d~~~~~~~---------~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 751 (769)
....... ......+... ........+ .......+.+++.+|++.||++|||++|+++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~h 314 (317)
T cd07868 235 DRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 314 (317)
T ss_pred HHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 1111100 0000000000 000000000 00011347899999999999999999999999
Q ss_pred hHh
Q 004195 752 LQF 754 (769)
Q Consensus 752 l~~ 754 (769)
+||
T Consensus 315 p~f 317 (317)
T cd07868 315 PYF 317 (317)
T ss_pred CCC
Confidence 986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-36 Score=320.05 Aligned_cols=255 Identities=19% Similarity=0.306 Sum_probs=198.0
Q ss_pred cCCCCcCccccCCceeEEEEEeC--------CCcEEEEEEccccCC-CChhHHHHHHHHHhhc-cCCceeeEeeeeeccC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT--------DGTLVAIRSLKMSKK-SSPHMYTYHIELISKL-RHSNLVSALGHCLDFS 549 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~--------~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~ 549 (769)
++|...+.||+|+||.||+|+.. ++..+|+|.++.... ....++.+|+++++++ +||||++++++|...+
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 46888999999999999999752 235799999975422 2235688899999999 7999999999997644
Q ss_pred CCCCCcceEEEEEeccCCCchhhhhcCCC---------------CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCcc
Q 004195 550 LDDPSISIIYLIFEYAPNETLRSFISGPG---------------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLK 614 (769)
Q Consensus 550 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlK 614 (769)
. .++||||+++|+|.+++.... ..++|.++.+++.|++.||+|||+. +++|||||
T Consensus 98 ~-------~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlk 167 (307)
T cd05098 98 P-------LYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLA 167 (307)
T ss_pred c-------eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---Cccccccc
Confidence 3 899999999999999997421 2589999999999999999999998 99999999
Q ss_pred ccceeeCCCceeeecCCCCchhhhccCCc--ce--eecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCch
Q 004195 615 ITDVLLDENFHVKINSYNLPLLAEARGKG--SA--EVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENV 689 (769)
Q Consensus 615 p~NILld~~~~~kl~DFGla~~~~~~~~~--~~--~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~ 689 (769)
|+||++++++.+||+|||.++........ .. .....|++||...+..++.++|||||||++|||++ |++|+....
T Consensus 168 p~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~ 247 (307)
T cd05098 168 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 247 (307)
T ss_pred HHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC
Confidence 99999999999999999998654321110 11 11235778998888889999999999999999998 888887554
Q ss_pred hHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 690 VVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
.......+.... .. +.+.....++.+++.+||+.+|++||++.||++++..+...
T Consensus 248 ~~~~~~~~~~~~----------~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 248 VEELFKLLKEGH----------RM----DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred HHHHHHHHHcCC----------CC----CCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 333322221110 00 11112234588999999999999999999999999876543
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=329.00 Aligned_cols=262 Identities=15% Similarity=0.194 Sum_probs=192.7
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
...+|...+.||+|+||.||+|+.. +++.||+|..... ....|+.++++++|||||++++++.+..
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~------- 130 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGA------- 130 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCC-------
Confidence 3457999999999999999999976 5789999975422 2456999999999999999999998643
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++||||+. ++|.+++......++|..+.+|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 131 ~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~ 206 (357)
T PHA03209 131 ITCMVLPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQF 206 (357)
T ss_pred eeEEEEEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccccc
Confidence 3799999995 689998876556799999999999999999999998 999999999999999999999999999865
Q ss_pred hhccC-CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCC-CCCchh----------HHHHhhhhhccccc
Q 004195 637 AEARG-KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPI-TSENVV----------VLVKDLLQVNIGTD 704 (769)
Q Consensus 637 ~~~~~-~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p-~~~~~~----------~~~~~~~~~~~~~~ 704 (769)
..... .....++..|++||.+.+..++.++|||||||++|||+++..+ |..... ..+...+.......
T Consensus 207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 286 (357)
T PHA03209 207 PVVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHP 286 (357)
T ss_pred cccCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccCh
Confidence 32221 1223345567889998888899999999999999999996543 332110 01111111000000
Q ss_pred cccc---------cccCccccC-----CC----CHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 705 EARK---------SIVDPAVMN-----EC----SDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 705 ~~~~---------~~~d~~~~~-----~~----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
..+. ..++..... .+ .......+.+++.+||+.||++|||+.|+++|+||..
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 287 EEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred hhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence 0000 000000000 00 0011234567999999999999999999999999863
|
|
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=312.74 Aligned_cols=254 Identities=18% Similarity=0.202 Sum_probs=210.2
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
-|..++.||+|.|+.|-.|++- +|+.||||++.+.+.+. ...+.+|++.|+-++|||||++|.+..... .
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQT-------K 91 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQT-------K 91 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccc-------e
Confidence 3566788999999999999854 89999999998765433 456888999999999999999999886543 3
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeC-CCceeeecCCCCchh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD-ENFHVKINSYNLPLL 636 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld-~~~~~kl~DFGla~~ 636 (769)
+|||+|.-++|+|+++|-++...+.+....+++.||+.|+.|+|+. .+|||||||+|+.+- .-|-+|+.|||++..
T Consensus 92 lyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNk 168 (864)
T KOG4717|consen 92 LYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNK 168 (864)
T ss_pred EEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeecccccc
Confidence 8999999999999999987777899999999999999999999998 999999999998874 568899999999954
Q ss_pred hhcc-CCcceeecCCCcchhhhccCCCC-CCCCeeehhHHHHHHHhCCCCCCCchh-HHHHhhhhhccccccccccccCc
Q 004195 637 AEAR-GKGSAEVSSPAKKTSVLARTEQD-DKSDVYDIGIILIEIIVGRPITSENVV-VLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 637 ~~~~-~~~~~~~~~~~~~pe~~~~~~~~-~ksDVwS~Gvil~elltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
+.++ .-.+.++...|.+||.+.+..|+ +++||||+|||||-|+.|++||.+... +.+.. ++|.
T Consensus 169 f~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTm--------------ImDC 234 (864)
T KOG4717|consen 169 FQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTM--------------IMDC 234 (864)
T ss_pred CCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhh--------------hhcc
Confidence 4433 44556677788899999999885 678999999999999999999986432 22222 2232
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcc
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQG 760 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~ 760 (769)
. ...|.....+..+||..|+..||++|.+.+||..+.|.....++
T Consensus 235 K--YtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~~ 279 (864)
T KOG4717|consen 235 K--YTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDRG 279 (864)
T ss_pred c--ccCchhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCCCC
Confidence 2 23455667779999999999999999999999999997654433
|
|
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-36 Score=309.11 Aligned_cols=246 Identities=20% Similarity=0.320 Sum_probs=194.8
Q ss_pred CCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEE
Q 004195 481 CFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYL 560 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~l 560 (769)
+|...+.||+|+||.||+|..+ |..||+|.++.. ...+.+.+|+.++++++|+|++++++++...+ +..++
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~------~~~~l 77 (256)
T cd05082 7 ELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEK------GGLYI 77 (256)
T ss_pred hCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCC------CceEE
Confidence 5778899999999999999875 788999998643 23467899999999999999999999875422 23799
Q ss_pred EEeccCCCchhhhhcCCC-CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhc
Q 004195 561 IFEYAPNETLRSFISGPG-YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEA 639 (769)
Q Consensus 561 V~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~ 639 (769)
||||+++++|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||++++++.+|++|||+++....
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 154 (256)
T cd05082 78 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 154 (256)
T ss_pred EEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceeccc
Confidence 999999999999997433 3589999999999999999999998 999999999999999999999999999865432
Q ss_pred cCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCccccCC
Q 004195 640 RGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNE 718 (769)
Q Consensus 640 ~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 718 (769)
... .......|++||......++.++|||||||++|||++ |+.|+...........+.... .+.....
T Consensus 155 ~~~-~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~----------~~~~~~~ 223 (256)
T cd05082 155 TQD-TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY----------KMDAPDG 223 (256)
T ss_pred cCC-CCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC----------CCCCCCC
Confidence 221 1222345788998888889999999999999999998 998886544332222221110 1111122
Q ss_pred CCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 719 CSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 719 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
++ ..+.+++.+|++.+|++|||++++++.+.
T Consensus 224 ~~----~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 254 (256)
T cd05082 224 CP----PVVYDVMKQCWHLDAATRPSFLQLREQLE 254 (256)
T ss_pred CC----HHHHHHHHHHhcCChhhCcCHHHHHHHHh
Confidence 33 34889999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-37 Score=321.78 Aligned_cols=246 Identities=21% Similarity=0.307 Sum_probs=203.1
Q ss_pred CcCccccCCceeEEEEEeCC-CcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEEE
Q 004195 484 SSSFMCDASHGQIYKGKLTD-GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIF 562 (769)
Q Consensus 484 ~~~~iG~G~~g~Vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV~ 562 (769)
-.++||-|.||.||.|.++. .-.||||.++.. ....++|..|..+|+.++|||+|+|+|+|...- -+|||+
T Consensus 271 MkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~Ep-------PFYIiT 342 (1157)
T KOG4278|consen 271 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEP-------PFYIIT 342 (1157)
T ss_pred eeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccCC-------CeEEEE
Confidence 35889999999999999874 678999999854 344688999999999999999999999997522 289999
Q ss_pred eccCCCchhhhhcCCC-CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhccC
Q 004195 563 EYAPNETLRSFISGPG-YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARG 641 (769)
Q Consensus 563 Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~~ 641 (769)
|||.+|+|.++|++.. ..++-...+.+|.||+.|++||... .+|||||-.+|+|+.++-.+||+|||+++++....
T Consensus 343 EfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDT 419 (1157)
T KOG4278|consen 343 EFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDT 419 (1157)
T ss_pred ecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchhhhhcCCc
Confidence 9999999999998432 3467777889999999999999998 99999999999999999999999999999986554
Q ss_pred Ccce---eecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCccccC
Q 004195 642 KGSA---EVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMN 717 (769)
Q Consensus 642 ~~~~---~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 717 (769)
...- .....|.+||.+....++.|+|||+|||+|||+.| |..|+.+-+...+..++...+..
T Consensus 420 YTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM-------------- 485 (1157)
T KOG4278|consen 420 YTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRM-------------- 485 (1157)
T ss_pred eecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccccc--------------
Confidence 4322 22334567888888889999999999999999999 88898876665555555543332
Q ss_pred CCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 718 ECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 718 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
+.++.++..+.+||+.||++.|.+||++.|+-+..+-
T Consensus 486 ~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEt 522 (1157)
T KOG4278|consen 486 DGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFET 522 (1157)
T ss_pred cCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHH
Confidence 2233444459999999999999999999999887763
|
|
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-36 Score=313.33 Aligned_cols=254 Identities=20% Similarity=0.281 Sum_probs=202.9
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
.|+..+.||+|+||.||+|... ++..||+|.+..... ...+.+.+|++++++++||||+++++++.+.. ..
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-------~~ 77 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGT-------KL 77 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC-------EE
Confidence 4666788999999999999975 688999999875432 22456889999999999999999999998643 38
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
++||||+++|+|.+++... .+++.+...++.|++.||+|||+. +++|+||+|+||+++.++.++++|||++....
T Consensus 78 ~lv~e~~~~~~L~~~i~~~--~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06640 78 WIIMEYLGGGSALDLLRAG--PFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLT 152 (277)
T ss_pred EEEEecCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceecc
Confidence 9999999999999998753 588999999999999999999998 99999999999999999999999999986543
Q ss_pred ccCC--cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCcccc
Q 004195 639 ARGK--GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM 716 (769)
Q Consensus 639 ~~~~--~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 716 (769)
.... ........+.+||...+..++.++|||||||++|||+||++|+............. ....
T Consensus 153 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~--------------~~~~ 218 (277)
T cd06640 153 DTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIP--------------KNNP 218 (277)
T ss_pred CCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhh--------------cCCC
Confidence 3221 11123345678998888889999999999999999999999987543222111110 0001
Q ss_pred CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcc
Q 004195 717 NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQG 760 (769)
Q Consensus 717 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~ 760 (769)
..........+.+++.+||+.+|++||+++++++|+|+.....+
T Consensus 219 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~ 262 (277)
T cd06640 219 PTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNAKK 262 (277)
T ss_pred CCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhcchh
Confidence 12233445668899999999999999999999999998765544
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-36 Score=310.56 Aligned_cols=239 Identities=16% Similarity=0.258 Sum_probs=184.9
Q ss_pred CccccCCceeEEEEEeCC-------------CcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCC
Q 004195 486 SFMCDASHGQIYKGKLTD-------------GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD 552 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~~-------------g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~ 552 (769)
+.||+|+||.||+|+..+ ...||+|.+..........+.+|+.+++.++||||+++++++.+...
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~-- 78 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVE-- 78 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC--
Confidence 468999999999998532 23589998876544445678889999999999999999999976433
Q ss_pred CCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCce-------
Q 004195 553 PSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH------- 625 (769)
Q Consensus 553 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~------- 625 (769)
.++||||+++|+|..++......+++..+.+++.||++||+|||+. +|+||||||+|||++.++.
T Consensus 79 -----~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~ 150 (262)
T cd05077 79 -----NIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPF 150 (262)
T ss_pred -----CEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCce
Confidence 6899999999999999876555799999999999999999999998 9999999999999987654
Q ss_pred eeecCCCCchhhhccCCcceeecCCCcchhhhc-cCCCCCCCCeeehhHHHHHHH-hCCCCCCCchhHHHHhhhhhcccc
Q 004195 626 VKINSYNLPLLAEARGKGSAEVSSPAKKTSVLA-RTEQDDKSDVYDIGIILIEII-VGRPITSENVVVLVKDLLQVNIGT 703 (769)
Q Consensus 626 ~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~-~~~~~~ksDVwS~Gvil~ell-tG~~p~~~~~~~~~~~~~~~~~~~ 703 (769)
+|++|||++....... ......+|++||... ...++.++|||||||++|||+ +|+.|+...............
T Consensus 151 ~~l~d~g~~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~--- 225 (262)
T cd05077 151 IKLSDPGIPITVLSRQ--ECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERFYEGQ--- 225 (262)
T ss_pred eEeCCCCCCccccCcc--cccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHHHhcC---
Confidence 8999999986543221 122345678898775 456899999999999999998 588887654322221111100
Q ss_pred ccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHh
Q 004195 704 DEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNL 752 (769)
Q Consensus 704 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 752 (769)
....... ...+.+++.+||+.||++||++.+|++++
T Consensus 226 ---------~~~~~~~----~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 226 ---------CMLVTPS----CKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred ---------ccCCCCC----hHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 0000111 23488999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-36 Score=322.12 Aligned_cols=256 Identities=15% Similarity=0.198 Sum_probs=196.9
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|...+.||+|+||.||+++.. +++.||+|.+.... ......+.+|+.++..++|+||+++++++.+.+
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~------ 74 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDEN------ 74 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC------
Confidence 47888999999999999999976 68899999987532 222345788999999999999999999987643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..|+||||+++|+|.+++.+....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 75 -~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~ 150 (331)
T cd05624 75 -YLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCL 150 (331)
T ss_pred -EEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEecccee
Confidence 48999999999999999986444789999999999999999999998 99999999999999999999999999986
Q ss_pred hhhccCCc---ceeecCCCcchhhhcc-----CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHH-Hhhhhhccccccc
Q 004195 636 LAEARGKG---SAEVSSPAKKTSVLAR-----TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLV-KDLLQVNIGTDEA 706 (769)
Q Consensus 636 ~~~~~~~~---~~~~~~~~~~pe~~~~-----~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~ 706 (769)
........ ...++..|++||.+.+ ..++.++|||||||++|||++|+.||........ ..+... ...
T Consensus 151 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~----~~~ 226 (331)
T cd05624 151 KMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH----EER 226 (331)
T ss_pred eccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcC----CCc
Confidence 54332211 1234556788998764 4678999999999999999999999975443221 111110 000
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcCcCCCCC--CCCHHHHHHHhHhhh
Q 004195 707 RKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKD--RPSVEDTLWNLQFAT 756 (769)
Q Consensus 707 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~l~~~~ 756 (769)
..-|..... .+.++.+++.+|+..++++ |++++++++|+||..
T Consensus 227 ---~~~p~~~~~----~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~ 271 (331)
T cd05624 227 ---FQFPSHITD----VSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEG 271 (331)
T ss_pred ---ccCCCcccc----CCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCC
Confidence 000111111 2345888999998876654 579999999999753
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=308.84 Aligned_cols=248 Identities=23% Similarity=0.351 Sum_probs=195.6
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
++|.....||+|++|.||+|...++..+|+|.+.... ...+.+.+|++++++++|||++++++++... ..+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--------~~~ 76 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVSEE--------PIY 76 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEcCC--------CcE
Confidence 3577788999999999999998777789999987543 3456789999999999999999999987531 268
Q ss_pred EEEeccCCCchhhhhcC-CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 560 LIFEYAPNETLRSFISG-PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
+||||+++|+|.+++.. ....++|..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||.++...
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~ 153 (260)
T cd05069 77 IVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIE 153 (260)
T ss_pred EEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEcc
Confidence 99999999999999974 334589999999999999999999998 99999999999999999999999999986553
Q ss_pred ccCCcc---eeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCcc
Q 004195 639 ARGKGS---AEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 639 ~~~~~~---~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
...... ......|.+||......++.++|||||||++|||+| |+.|+.+.........+... ..+.
T Consensus 154 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~----------~~~~ 223 (260)
T cd05069 154 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERG----------YRMP 223 (260)
T ss_pred CCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC----------CCCC
Confidence 322111 112234778998878889999999999999999999 88888764432222211110 0011
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
.+...+..+.+++.+||+.||++||+++++++.+.
T Consensus 224 ----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 258 (260)
T cd05069 224 ----CPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLE 258 (260)
T ss_pred ----CCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHh
Confidence 11223345899999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-36 Score=318.89 Aligned_cols=251 Identities=16% Similarity=0.269 Sum_probs=197.7
Q ss_pred CcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEEE
Q 004195 484 SSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIF 562 (769)
Q Consensus 484 ~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV~ 562 (769)
....||+|+||.||++... ++..||||.+........+.+.+|+.++++++|+||+++++++...+ ..++||
T Consensus 26 ~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~-------~~~lv~ 98 (292)
T cd06658 26 SFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGD-------ELWVVM 98 (292)
T ss_pred hhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCC-------eEEEEE
Confidence 3467999999999999965 68899999987554444567889999999999999999999987643 389999
Q ss_pred eccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhccCC
Q 004195 563 EYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGK 642 (769)
Q Consensus 563 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~ 642 (769)
||+++++|.+++... .+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++........
T Consensus 99 e~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~ 173 (292)
T cd06658 99 EFLEGGALTDIVTHT--RMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP 173 (292)
T ss_pred eCCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc
Confidence 999999999988643 589999999999999999999998 999999999999999999999999999865432211
Q ss_pred --cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccCCCC
Q 004195 643 --GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECS 720 (769)
Q Consensus 643 --~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 720 (769)
........|.+||......++.++|||||||++|||++|+.||...........+.. ...+.... .
T Consensus 174 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~----------~~~~~~~~--~ 241 (292)
T cd06658 174 KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRD----------NLPPRVKD--S 241 (292)
T ss_pred cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh----------cCCCcccc--c
Confidence 122334567889988888899999999999999999999999865432211111111 01111111 0
Q ss_pred HHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 721 DESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 721 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
......+.+++.+|+..||++|||++|+++|+|+....
T Consensus 242 ~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~ 279 (292)
T cd06658 242 HKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAG 279 (292)
T ss_pred cccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccC
Confidence 11223478899999999999999999999999998543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=309.78 Aligned_cols=253 Identities=17% Similarity=0.295 Sum_probs=195.5
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC-----ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS-----SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
.+|...+.||+|+||.||+|... ++..||+|++...... ..+.+.+|+.++++++||||+++++++.+..
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 77 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRA---- 77 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCC----
Confidence 36888999999999999999965 6899999998654221 1245788999999999999999999886522
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
....+++|||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 78 -~~~~~l~~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~ 152 (266)
T cd06651 78 -EKTLTIFMEYMPGGSVKDQLKAYG-ALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGA 152 (266)
T ss_pred -CCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCC
Confidence 234789999999999999997544 589999999999999999999998 999999999999999999999999999
Q ss_pred chhhhccCC-----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccc
Q 004195 634 PLLAEARGK-----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARK 708 (769)
Q Consensus 634 a~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (769)
++....... ........|.+||...+..++.++|||||||++|||+||++||....... ...... .
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~--~~~~~~-~------ 223 (266)
T cd06651 153 SKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMA--AIFKIA-T------ 223 (266)
T ss_pred ccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHH--HHHHHh-c------
Confidence 865432111 11223345778998888888999999999999999999999987543211 111100 0
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
....+.+ +......+.+++ +||..+|++||+++||++|+||.
T Consensus 224 ~~~~~~~----~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 224 QPTNPQL----PSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred CCCCCCC----chhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 0011221 222233466676 78889999999999999999974
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-36 Score=309.48 Aligned_cols=254 Identities=21% Similarity=0.307 Sum_probs=201.7
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
++|+..+.||+|+||.||+|... +++.+|+|.+........+.+.+|++++++++||||+++++++.+.. ..
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-------~~ 75 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRD-------KL 75 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCC-------EE
Confidence 57888899999999999999975 68899999998665555678999999999999999999999987633 48
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
+++|||+++++|.+++......+++.++..++.|++.||+|||+. +++||||||+||++++++.+||+|||.+....
T Consensus 76 ~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~ 152 (262)
T cd06613 76 WIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLT 152 (262)
T ss_pred EEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhh
Confidence 999999999999999986545799999999999999999999998 99999999999999999999999999986554
Q ss_pred ccC--CcceeecCCCcchhhhccC---CCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCc
Q 004195 639 ARG--KGSAEVSSPAKKTSVLART---EQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 639 ~~~--~~~~~~~~~~~~pe~~~~~---~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
... .........|.+||..... .++.++|||||||++|||+||++|+.............. ....+
T Consensus 153 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~---------~~~~~ 223 (262)
T cd06613 153 ATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISK---------SNFPP 223 (262)
T ss_pred hhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh---------ccCCC
Confidence 322 1112233456788887666 789999999999999999999999875432211111100 00011
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
.. ..........+.+++.+||+.+|.+|||+.+|+.|.|
T Consensus 224 ~~-~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 224 PK-LKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred cc-ccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 10 0112234456899999999999999999999998875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-36 Score=316.02 Aligned_cols=248 Identities=21% Similarity=0.313 Sum_probs=192.4
Q ss_pred CCCcCccccCCceeEEEEEeC------CCcEEEEEEccccCCCC-hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 482 FDSSSFMCDASHGQIYKGKLT------DGTLVAIRSLKMSKKSS-PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~~~~~~~~~-~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
|...+.||+|+||.||+|+.. ++..||+|+++...... .+.+.+|+.++++++||||+++++++.+...
T Consensus 7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~---- 82 (283)
T cd05091 7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQP---- 82 (283)
T ss_pred HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCc----
Confidence 555688999999999999853 25789999997543221 3568899999999999999999999976443
Q ss_pred cceEEEEEeccCCCchhhhhcCC---------------CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCcccccee
Q 004195 555 ISIIYLIFEYAPNETLRSFISGP---------------GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVL 619 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NIL 619 (769)
.++++||+++++|.+++... ...+++..+.+++.|+++||+|+|+. +|+||||||+||+
T Consensus 83 ---~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil 156 (283)
T cd05091 83 ---LSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVL 156 (283)
T ss_pred ---eEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheE
Confidence 79999999999999998521 12588999999999999999999998 9999999999999
Q ss_pred eCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHH
Q 004195 620 LDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVK 694 (769)
Q Consensus 620 ld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~ 694 (769)
+++++.+||+|||+++....... ........|++||......++.++|||||||++|||+| |.+|+.........
T Consensus 157 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~ 236 (283)
T cd05091 157 VFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVI 236 (283)
T ss_pred ecCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 99999999999999865432221 11112335788998888889999999999999999998 88888664433222
Q ss_pred hhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 695 DLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 695 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
..+... . .+.....++ ..+.+++.+||+.+|++||+++||+..+.
T Consensus 237 ~~i~~~----~------~~~~~~~~~----~~~~~li~~cl~~~p~~RP~~~~i~~~l~ 281 (283)
T cd05091 237 EMIRNR----Q------VLPCPDDCP----AWVYTLMLECWNEFPSRRPRFKDIHSRLR 281 (283)
T ss_pred HHHHcC----C------cCCCCCCCC----HHHHHHHHHHhCCCcccCCCHHHHHHHhh
Confidence 221110 0 011112333 34889999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-36 Score=308.48 Aligned_cols=244 Identities=19% Similarity=0.276 Sum_probs=192.4
Q ss_pred CccccCCceeEEEEEeC--C--CcEEEEEEccccCCC-ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEE
Q 004195 486 SFMCDASHGQIYKGKLT--D--GTLVAIRSLKMSKKS-SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYL 560 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~--~--g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~l 560 (769)
+.||+|+||.||+|++. + +..||+|.+...... ..+++.+|++++++++|||||++++++... ..++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--------~~~~ 72 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKGE--------PLML 72 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCC--------ceEE
Confidence 46999999999999854 2 268999999865432 345789999999999999999999987532 2699
Q ss_pred EEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhcc
Q 004195 561 IFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEAR 640 (769)
Q Consensus 561 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~ 640 (769)
||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+|++|||+++.....
T Consensus 73 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~ 148 (257)
T cd05060 73 VMELAPLGPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAG 148 (257)
T ss_pred EEEeCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecC
Confidence 999999999999998654 789999999999999999999998 9999999999999999999999999998655332
Q ss_pred CCcce-----eecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCcc
Q 004195 641 GKGSA-----EVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 641 ~~~~~-----~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
..... .....|++||......++.++|||||||++|||++ |++||...........+.... ...
T Consensus 149 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~----------~~~ 218 (257)
T cd05060 149 SDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGE----------RLP 218 (257)
T ss_pred CcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC----------cCC
Confidence 21111 01124778998888889999999999999999998 999987654333322221110 001
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
....+ +..+.+++.+||..+|++||++.++++.+...
T Consensus 219 ~~~~~----~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 219 RPEEC----PQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred CCCCC----CHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 11122 34588999999999999999999999988643
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-37 Score=324.21 Aligned_cols=251 Identities=20% Similarity=0.275 Sum_probs=203.8
Q ss_pred cCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEEEe
Q 004195 485 SSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFE 563 (769)
Q Consensus 485 ~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV~E 563 (769)
.-++|+|.||+||-|+.. +...+|||.+........+-+..||.+.++++|+|||+++|.|.+++ ++-+.||
T Consensus 580 rvVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senG-------f~kIFME 652 (1226)
T KOG4279|consen 580 RVVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENG-------FFKIFME 652 (1226)
T ss_pred eEEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCC-------eEEEEee
Confidence 347999999999999965 56789999998765555567888999999999999999999987543 4789999
Q ss_pred ccCCCchhhhhcCCCCCC--CHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC-CceeeecCCCCchhhhcc
Q 004195 564 YAPNETLRSFISGPGYKL--TWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE-NFHVKINSYNLPLLAEAR 640 (769)
Q Consensus 564 y~~~gsL~~~l~~~~~~l--~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~-~~~~kl~DFGla~~~~~~ 640 (769)
-+|||+|.++++..-.++ .+.+.-.+.+||++||.|||+. .|||||||-+|+|++. .|.+||+|||.++....-
T Consensus 653 qVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi 729 (1226)
T KOG4279|consen 653 QVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI 729 (1226)
T ss_pred cCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccC
Confidence 999999999998554466 7788889999999999999999 9999999999999964 689999999998654322
Q ss_pred --CCcceeecCCCcchhhhccC--CCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCcccc
Q 004195 641 --GKGSAEVSSPAKKTSVLART--EQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM 716 (769)
Q Consensus 641 --~~~~~~~~~~~~~pe~~~~~--~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 716 (769)
-..+..++-.|++||++..+ .|+.++|||||||++.||.||+|||.+-......- .++.+ -...
T Consensus 730 nP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAM-FkVGm-----------yKvH 797 (1226)
T KOG4279|consen 730 NPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAM-FKVGM-----------YKVH 797 (1226)
T ss_pred CccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhh-hhhcc-----------eecC
Confidence 23344566788999998654 58999999999999999999999997644322211 11111 1112
Q ss_pred CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 717 NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 717 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
+..|.+...+...+|.+|..+||.+||++.+++..++....
T Consensus 798 P~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 798 PPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN 838 (1226)
T ss_pred CCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence 45677778889999999999999999999999999986543
|
|
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-36 Score=314.14 Aligned_cols=257 Identities=16% Similarity=0.241 Sum_probs=202.6
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|+..+.||+|++|.||+|... +++.||+|++..... ...+++.+|++++++++||||+++++++.... .
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-------~ 73 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNG-------D 73 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCC-------E
Confidence 35777889999999999999976 689999999876532 23457889999999999999999999987643 4
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhccccc-CCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHT-GIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
.++|+||+++++|.+++......+++..+.+++.|+++||+|||+ . +++||||||+||++++++.+||+|||.+..
T Consensus 74 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~ 150 (265)
T cd06605 74 ISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQ 150 (265)
T ss_pred EEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchh
Confidence 899999999999999998554578999999999999999999999 7 999999999999999999999999999865
Q ss_pred hhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchh--HHHHhhhhhccccccccccccCcc
Q 004195 637 AEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVV--VLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 637 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
..............|++||...+..++.++||||||+++|||++|+.|+..... .......+.... ...+.
T Consensus 151 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-------~~~~~ 223 (265)
T cd06605 151 LVNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVN-------EPPPR 223 (265)
T ss_pred hHHHHhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhc-------CCCCC
Confidence 533322223344567889988888899999999999999999999999865321 111111111000 00111
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
+... ....++.+++.+||..+|++|||+.|++.|+||..
T Consensus 224 ~~~~---~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~ 262 (265)
T cd06605 224 LPSG---KFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKK 262 (265)
T ss_pred CChh---hcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhc
Confidence 1111 13445889999999999999999999999999964
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-36 Score=312.49 Aligned_cols=252 Identities=20% Similarity=0.295 Sum_probs=194.4
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
++|...+.||+|+||.||+|+.. +++.||+|.++.........+.+|+.+++.++||||+++++++.+.+ ..
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~-------~~ 81 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRD-------KL 81 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC-------EE
Confidence 35666788999999999999965 68999999987654444456888999999999999999999987643 38
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
++||||+++++|.+++...+ .+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++....
T Consensus 82 ~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06645 82 WICMEFCGGGSLQDIYHVTG-PLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQIT 157 (267)
T ss_pred EEEEeccCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEcc
Confidence 99999999999999987554 689999999999999999999998 99999999999999999999999999985442
Q ss_pred ccCC--cceeecCCCcchhhhc---cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhccccccccccccC
Q 004195 639 ARGK--GSAEVSSPAKKTSVLA---RTEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIGTDEARKSIVD 712 (769)
Q Consensus 639 ~~~~--~~~~~~~~~~~pe~~~---~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~d 712 (769)
.... ....++..|++||... ...++.++|||||||++|||++|++|+...... ......... ...
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~---------~~~ 228 (267)
T cd06645 158 ATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSN---------FQP 228 (267)
T ss_pred CcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccC---------CCC
Confidence 2111 1122344567788763 455889999999999999999999987543221 111110000 000
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 713 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
+.... .......+.+++.+|++.+|++||+++++++|+|
T Consensus 229 ~~~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 229 PKLKD--KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred Ccccc--cCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 11100 0011234789999999999999999999999976
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-37 Score=316.55 Aligned_cols=254 Identities=23% Similarity=0.383 Sum_probs=194.8
Q ss_pred CCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCCh--hHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 482 FDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSP--HMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~--~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
|+..+.||+|+||+||+++.. +++.||+|++........ ....+|+.++++++||||+++++++.+.. ..
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~-------~~ 73 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDN-------YL 73 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESS-------EE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccc-------cc
Confidence 456789999999999999976 577999999986543222 23356999999999999999999998733 38
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
++||||+++++|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||++++++.++|+|||.+....
T Consensus 74 ~~v~~~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~ 149 (260)
T PF00069_consen 74 YIVMEYCPGGSLQDYLQKN-KPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLS 149 (260)
T ss_dssp EEEEEEETTEBHHHHHHHH-SSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEEST
T ss_pred ccccccccccccccccccc-ccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccc
Confidence 9999999999999999832 3689999999999999999999999 99999999999999999999999999986421
Q ss_pred --ccCCcceeecCCCcchhhhc-cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccc
Q 004195 639 --ARGKGSAEVSSPAKKTSVLA-RTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAV 715 (769)
Q Consensus 639 --~~~~~~~~~~~~~~~pe~~~-~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 715 (769)
.........+..+.+||... ...++.++||||+|+++|+|++|+.|+................... .....
T Consensus 150 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~------~~~~~ 223 (260)
T PF00069_consen 150 ENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRP------LPSSS 223 (260)
T ss_dssp STTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTH------HHHHT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccc------ccccc
Confidence 11112223344567888877 6788999999999999999999999988652111111111110000 00000
Q ss_pred cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 716 MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 716 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
.........+.+++.+||+.||++||++.++++|+||
T Consensus 224 --~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 224 --QQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp --TSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred --cccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 0000011458999999999999999999999999996
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-36 Score=315.83 Aligned_cols=256 Identities=19% Similarity=0.302 Sum_probs=191.2
Q ss_pred cCCCCcCccccCCceeEEEEEeCC---------------CcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEee
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTD---------------GTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALG 543 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~---------------g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~ 543 (769)
++|+..+.||+|+||.||+|+... ...||+|.++.... ...+.+.+|++++++++|+||+++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 468888999999999999987542 23589999975422 22356899999999999999999999
Q ss_pred eeeccCCCCCCcceEEEEEeccCCCchhhhhcCCC-----------CCCCHHHHHHHHHHHHHHhcccccCCCCCccccC
Q 004195 544 HCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPG-----------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNN 612 (769)
Q Consensus 544 ~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~-----------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrD 612 (769)
++..... .++||||+++++|.+++.... ..++|..+.+++.|+++||+|||+. +++|||
T Consensus 85 ~~~~~~~-------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~d 154 (295)
T cd05097 85 VCVSDDP-------LCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRD 154 (295)
T ss_pred EEcCCCc-------cEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---Ceeccc
Confidence 9976433 799999999999999986321 2478999999999999999999998 999999
Q ss_pred ccccceeeCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh--CCCCCC
Q 004195 613 LKITDVLLDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV--GRPITS 686 (769)
Q Consensus 613 lKp~NILld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt--G~~p~~ 686 (769)
|||+||++++++.+|++|||++........ ........|++||......++.++|||||||++|||++ |..||.
T Consensus 155 lkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~ 234 (295)
T cd05097 155 LATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYS 234 (295)
T ss_pred cChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCc
Confidence 999999999999999999999865432211 11111235778888888889999999999999999998 556776
Q ss_pred CchhHHH-HhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 687 ENVVVLV-KDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 687 ~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
....... ...... ..... .... .......+ ..+.+++.+||+.||++||++++|++.+.
T Consensus 235 ~~~~~~~~~~~~~~-~~~~~--~~~~-~~~~~~~~----~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 235 LLSDEQVIENTGEF-FRNQG--RQIY-LSQTPLCP----SPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred ccChHHHHHHHHHh-hhhcc--cccc-CCCCCCCC----HHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 4332221 111110 00000 0000 00011122 35999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-36 Score=312.61 Aligned_cols=249 Identities=20% Similarity=0.320 Sum_probs=194.2
Q ss_pred CCCCcCccccCCceeEEEEEeC------CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT------DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
+|...+.||+|+||.||++... ++..+|+|.+........+.+.+|++++++++|+||+++++++.+...
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~---- 81 (280)
T cd05092 6 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRP---- 81 (280)
T ss_pred hceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCc----
Confidence 4666799999999999999632 366899999876544445689999999999999999999999876433
Q ss_pred cceEEEEEeccCCCchhhhhcCCC--------------CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceee
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPG--------------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLL 620 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~--------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl 620 (769)
.++||||+++|+|.+++.... ..+++..+..++.|++.|++|||+. +++||||||+||++
T Consensus 82 ---~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~ 155 (280)
T cd05092 82 ---LLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLV 155 (280)
T ss_pred ---eEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEE
Confidence 799999999999999987432 2589999999999999999999998 99999999999999
Q ss_pred CCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHh
Q 004195 621 DENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKD 695 (769)
Q Consensus 621 d~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~ 695 (769)
++++.+||+|||++........ ........|.+||......++.++|||||||++|||++ |++||..........
T Consensus 156 ~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~ 235 (280)
T cd05092 156 GQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIE 235 (280)
T ss_pred cCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHH
Confidence 9999999999999864432211 11111235778998888889999999999999999999 899886543222111
Q ss_pred hhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 696 LLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 696 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
..... ..+.....+++ .+.+++.+||+.||++||+++||++.+.
T Consensus 236 ~~~~~----------~~~~~~~~~~~----~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 236 CITQG----------RELERPRTCPP----EVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred HHHcC----------ccCCCCCCCCH----HHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 11100 00111122333 4889999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-36 Score=316.81 Aligned_cols=264 Identities=20% Similarity=0.301 Sum_probs=199.6
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC--CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK--SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
+|+..+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|+.++++++||||+++++++.+.. .
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-------~ 73 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGS-------G 73 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCC-------e
Confidence 4777899999999999999975 689999999976542 23467899999999999999999999987633 3
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.++||||+ +++|.+++......+++.++..++.|+++||+|||+. +++|+||||+||+++.++.++++|||.+...
T Consensus 74 ~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~ 149 (286)
T cd07832 74 FVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLF 149 (286)
T ss_pred eEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccc
Confidence 89999999 9999999975556799999999999999999999998 9999999999999999999999999998665
Q ss_pred hccC---CcceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccc--ccccc---
Q 004195 638 EARG---KGSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGT--DEARK--- 708 (769)
Q Consensus 638 ~~~~---~~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~--~~~~~--- 708 (769)
.... .....+...|.+||...+. .++.++||||+||++|||+||++|+.................. ...+.
T Consensus 150 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (286)
T cd07832 150 SEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLT 229 (286)
T ss_pred cCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhcc
Confidence 4332 1222334456778876543 4689999999999999999998888654322111111111110 00000
Q ss_pred ------cccCccc----cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 709 ------SIVDPAV----MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 709 ------~~~d~~~----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
.+..+.. ..+..++....+.+++.+|++.+|++||+++++++|+||.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 230 SLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred CcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 0000000 0001112235689999999999999999999999999973
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-36 Score=315.18 Aligned_cols=251 Identities=24% Similarity=0.325 Sum_probs=194.6
Q ss_pred CCCCcCccccCCceeEEEEEeC------CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT------DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
+|...+.||+|+||.||+|+.. ....+|+|.+..... ...+++.+|+.++++++||||++++++|...+.
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--- 77 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGP--- 77 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCC---
Confidence 4677899999999999999853 235799998874432 123568899999999999999999999876443
Q ss_pred CcceEEEEEeccCCCchhhhhcCC-----------------------CCCCCHHHHHHHHHHHHHHhcccccCCCCCccc
Q 004195 554 SISIIYLIFEYAPNETLRSFISGP-----------------------GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFS 610 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~-----------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH 610 (769)
.++|+||+++|+|.+++... ...+++.++..++.|++.||+|||+. +|+|
T Consensus 78 ----~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH 150 (290)
T cd05045 78 ----LLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVH 150 (290)
T ss_pred ----cEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceeh
Confidence 79999999999999987521 13588999999999999999999998 9999
Q ss_pred cCccccceeeCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCC
Q 004195 611 NNLKITDVLLDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPIT 685 (769)
Q Consensus 611 rDlKp~NILld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~ 685 (769)
|||||+||++++++.+||+|||+++....... ........|++||...+..++.++||||||+++|||+| |+.||
T Consensus 151 ~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~ 230 (290)
T cd05045 151 RDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 230 (290)
T ss_pred hhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCC
Confidence 99999999999999999999999865422211 11122335678888878889999999999999999999 99998
Q ss_pred CCchhHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 686 SENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
.......+........ .+.....++ ..+.+++.+|++.+|++||+++|+++.++..
T Consensus 231 ~~~~~~~~~~~~~~~~----------~~~~~~~~~----~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~ 286 (290)
T cd05045 231 PGIAPERLFNLLKTGY----------RMERPENCS----EEMYNLMLTCWKQEPDKRPTFADISKELEKM 286 (290)
T ss_pred CCCCHHHHHHHHhCCC----------CCCCCCCCC----HHHHHHHHHHccCCcccCCCHHHHHHHHHHH
Confidence 7654333322221110 111112223 3488999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-36 Score=316.19 Aligned_cols=264 Identities=19% Similarity=0.245 Sum_probs=202.4
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|+..+.||.|++|.||+|... +++.||+|.+..... .....+.+|++++++++||||++++++|.+.. ...
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-----~~~ 75 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDES-----SSS 75 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccC-----CCe
Confidence 46788899999999999999975 689999999875432 23467899999999999999999999986532 234
Q ss_pred EEEEEeccCCCchhhhhc---CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 558 IYLIFEYAPNETLRSFIS---GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
.++||||+++++|.+++. .....+++.....++.|+++||+|||+. +++|+||+|+||++++++.++|+|||++
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~ 152 (287)
T cd06621 76 IGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVS 152 (287)
T ss_pred EEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecccc
Confidence 899999999999998865 2334689999999999999999999998 9999999999999999999999999998
Q ss_pred hhhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchh--HHHHhhhhhccccccccccccC
Q 004195 635 LLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVV--VLVKDLLQVNIGTDEARKSIVD 712 (769)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~d 712 (769)
................|.+||...+..++.++||||+||++|||++|+.|+..... ....+........ ..
T Consensus 153 ~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-------~~ 225 (287)
T cd06621 153 GELVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNM-------PN 225 (287)
T ss_pred ccccccccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcC-------Cc
Confidence 65433222222334557788888888899999999999999999999999875421 0001111110000 00
Q ss_pred ccccCCCC--HHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 713 PAVMNECS--DESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 713 ~~~~~~~~--~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
+.+..... ......+.+++.+||+.+|++|||+.|+++|+|+....
T Consensus 226 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~ 273 (287)
T cd06621 226 PELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQM 273 (287)
T ss_pred hhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccccccc
Confidence 11100100 12345688999999999999999999999999996543
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-36 Score=313.68 Aligned_cols=267 Identities=21% Similarity=0.339 Sum_probs=203.9
Q ss_pred cCHHHHHHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhc-cCCceeeEeeeeec
Q 004195 470 FTLDELKEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKL-RHSNLVSALGHCLD 547 (769)
Q Consensus 470 ~~~~el~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~ 547 (769)
.++.++..+.+.|+..+.||+|+||.||+|+.. +++.||+|.+.... ....++..|+.+++++ +||||+++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 356677777889999999999999999999975 68999999986542 2345688899999998 69999999999865
Q ss_pred cCCCCCCcceEEEEEeccCCCchhhhhcC-CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCcee
Q 004195 548 FSLDDPSISIIYLIFEYAPNETLRSFISG-PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHV 626 (769)
Q Consensus 548 ~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ 626 (769)
.... ......++||||+++|+|.+++.. ....+++..+..++.|+++||+|||+. +|+||||||+||++++++.+
T Consensus 85 ~~~~-~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~~ 160 (282)
T cd06636 85 KSPP-GHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAEV 160 (282)
T ss_pred cccc-CCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCE
Confidence 3221 123568999999999999999873 234588999999999999999999998 99999999999999999999
Q ss_pred eecCCCCchhhhccC--CcceeecCCCcchhhhc-----cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhh
Q 004195 627 KINSYNLPLLAEARG--KGSAEVSSPAKKTSVLA-----RTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQV 699 (769)
Q Consensus 627 kl~DFGla~~~~~~~--~~~~~~~~~~~~pe~~~-----~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~ 699 (769)
+|+|||++....... .........|.+||.+. ...++.++|||||||++|||+||++||....... .....
T Consensus 161 ~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~--~~~~~ 238 (282)
T cd06636 161 KLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMR--ALFLI 238 (282)
T ss_pred EEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHh--hhhhH
Confidence 999999986543221 11222344577788764 3467889999999999999999999986533211 10000
Q ss_pred ccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 700 NIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 700 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
. ....+... ....+..+.+++.+||+.||.+||++.|+++|+|+
T Consensus 239 ~--------~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 239 P--------RNPPPKLK---SKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred h--------hCCCCCCc---ccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 0 00011110 11223358999999999999999999999999985
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-36 Score=313.56 Aligned_cols=263 Identities=19% Similarity=0.316 Sum_probs=194.2
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC--CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK--SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
+|+..+.||+|++|.||+|+.. +|+.||||+++.... ...+.+.+|+.++++++||||+++++++.+.. .
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-------~ 73 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQES-------R 73 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCC-------e
Confidence 4777899999999999999975 689999999875432 22467889999999999999999999997643 3
Q ss_pred EEEEEeccCCCchhhhhcC--CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 558 IYLIFEYAPNETLRSFISG--PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
.++||||++ ++|.+++.. .+..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 74 ~~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 149 (285)
T cd07861 74 LYLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLAR 149 (285)
T ss_pred EEEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECccccee
Confidence 899999997 688888863 224689999999999999999999998 99999999999999999999999999986
Q ss_pred hhhccCC--cceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhcccc-cccc---
Q 004195 636 LAEARGK--GSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIGT-DEAR--- 707 (769)
Q Consensus 636 ~~~~~~~--~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~~-~~~~--- 707 (769)
....... ........|.+||.+.+ ..++.++|||||||++|||+||++||...... ............ ...+
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (285)
T cd07861 150 AFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGV 229 (285)
T ss_pred ecCCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcc
Confidence 4422111 11223445778887654 34789999999999999999999998754321 111111100000 0000
Q ss_pred ------ccccCccc---cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 708 ------KSIVDPAV---MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 708 ------~~~~d~~~---~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
...++... ..........++.+++.+||+.||++|||+.+|+.|+||
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 230 TSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred hhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 00000000 000011123457899999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-36 Score=317.53 Aligned_cols=270 Identities=18% Similarity=0.301 Sum_probs=201.3
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC-----ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS-----SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
+|+..+.||+|++|.||+|... +|+.||||+++..... ....+..|++++++++|+||+++++++.+..
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~----- 75 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKS----- 75 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCC-----
Confidence 3677889999999999999975 6899999999765332 2345678999999999999999999998633
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
..++||||+ +|+|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 76 --~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~ 149 (298)
T cd07841 76 --NINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLA 149 (298)
T ss_pred --EEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceee
Confidence 489999999 8999999986544799999999999999999999999 9999999999999999999999999998
Q ss_pred hhhhccCC--cceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhcccc--ccccc
Q 004195 635 LLAEARGK--GSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIGT--DEARK 708 (769)
Q Consensus 635 ~~~~~~~~--~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~~--~~~~~ 708 (769)
+....... ........|.+||.+.+ ..++.++|||||||++|||++|.+||...... ........ ... ...+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 228 (298)
T cd07841 150 RSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEA-LGTPTEENWP 228 (298)
T ss_pred eeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHH-cCCCchhhhh
Confidence 65543211 11122334677887643 45789999999999999999998887654321 11111111 100 00000
Q ss_pred ------cccCccccC-----CCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcccc
Q 004195 709 ------SIVDPAVMN-----ECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQGLK 762 (769)
Q Consensus 709 ------~~~d~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~~~ 762 (769)
......... .........+.+++.+||+.+|++|||++|+++|.|+........
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~~~~ 293 (298)
T cd07841 229 GVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAPTP 293 (298)
T ss_pred hcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCCCCC
Confidence 000000000 011223456889999999999999999999999999986554443
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-36 Score=310.42 Aligned_cols=251 Identities=19% Similarity=0.333 Sum_probs=195.7
Q ss_pred cCCCCcCccccCCceeEEEEEeC-C---CcEEEEEEccccCCC-ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-D---GTLVAIRSLKMSKKS-SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~---g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
++|...+.||+|+||.||+|+.. + +..+|+|.++..... ..+.+.+|+.++++++||||+++++++.+.+.
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~---- 79 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKP---- 79 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCc----
Confidence 46778899999999999999863 2 347999998754322 23578999999999999999999999875433
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
.++||||+++++|.+++......+++.++..++.|++.||+|||+. +++||||||+||+++.++.+|++|||++
T Consensus 80 ---~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~ 153 (267)
T cd05066 80 ---VMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLS 153 (267)
T ss_pred ---cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCcc
Confidence 7999999999999999986555789999999999999999999998 9999999999999999999999999998
Q ss_pred hhhhccCCccee-----ecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccc
Q 004195 635 LLAEARGKGSAE-----VSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARK 708 (769)
Q Consensus 635 ~~~~~~~~~~~~-----~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (769)
+........... ....+.+||......++.++|||||||++||+++ |+.||...........+....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~------- 226 (267)
T cd05066 154 RVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGY------- 226 (267)
T ss_pred cccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCC-------
Confidence 765432211111 1124677888887889999999999999999887 999986543322222111100
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
.+......+ ..+.+++.+|++.+|++||++.++++.+..
T Consensus 227 ---~~~~~~~~~----~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 265 (267)
T cd05066 227 ---RLPAPMDCP----AALHQLMLDCWQKDRNERPKFEQIVSILDK 265 (267)
T ss_pred ---cCCCCCCCC----HHHHHHHHHHcccCchhCCCHHHHHHHHHh
Confidence 011111223 348899999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=323.23 Aligned_cols=250 Identities=20% Similarity=0.284 Sum_probs=200.6
Q ss_pred cCccccCCceeEEEEEeC-CCcEEEEEEcccc--CCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 485 SSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS--KKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 485 ~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~--~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
..+||+|+|-+||||.+. +|..||.-.++.. .+.. .+.|..|+.+|+.|+|||||++|.++.+... ....
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n-----~~in 119 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDN-----KTIN 119 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCC-----ceee
Confidence 467999999999999976 6888886444332 1222 3679999999999999999999999987443 3478
Q ss_pred EEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC-CceeeecCCCCchhhh
Q 004195 560 LIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE-NFHVKINSYNLPLLAE 638 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~-~~~~kl~DFGla~~~~ 638 (769)
+|+|.|..|+|..|.++.+ .++....+.+++||++||.|||++ .|+|||||||-+||+++. .|.+||+|.|+|....
T Consensus 120 ~iTEL~TSGtLr~Y~kk~~-~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r 197 (632)
T KOG0584|consen 120 FITELFTSGTLREYRKKHR-RVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLR 197 (632)
T ss_pred eeeecccCCcHHHHHHHhc-cCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhh
Confidence 9999999999999998776 689999999999999999999996 789999999999999975 5899999999998887
Q ss_pred ccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchh--HHHHhhhhhccccccccccccCcccc
Q 004195 639 ARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVV--VLVKDLLQVNIGTDEARKSIVDPAVM 716 (769)
Q Consensus 639 ~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~~~ 716 (769)
........+++-+|+||.+. ..|++.+||||||+.++||+|+..||.+... ....+... . ..+..+..+-||
T Consensus 198 ~s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~S-G-iKP~sl~kV~dP--- 271 (632)
T KOG0584|consen 198 KSHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTS-G-IKPAALSKVKDP--- 271 (632)
T ss_pred ccccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHc-C-CCHHHhhccCCH---
Confidence 66555555566667888764 7899999999999999999999999986432 22222111 1 112223333333
Q ss_pred CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 717 NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 717 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
++.++|.+|+.. .++|||+.|+|+|++|...
T Consensus 272 ---------evr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 272 ---------EVREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred ---------HHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 288999999999 9999999999999999865
|
|
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=306.61 Aligned_cols=244 Identities=25% Similarity=0.384 Sum_probs=195.9
Q ss_pred CccccCCceeEEEEEeCC----CcEEEEEEccccCCCC-hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEE
Q 004195 486 SFMCDASHGQIYKGKLTD----GTLVAIRSLKMSKKSS-PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYL 560 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~~----g~~vAvK~~~~~~~~~-~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~l 560 (769)
+.||+|+||.||+|.... +..||+|.++...... .+.+.+|++++.+++|+||+++++++.+.. ..++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-------~~~l 73 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEE-------PLYL 73 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCC-------ceEE
Confidence 469999999999999753 7899999998654333 567899999999999999999999998633 3899
Q ss_pred EEeccCCCchhhhhcCC--------CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCC
Q 004195 561 IFEYAPNETLRSFISGP--------GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYN 632 (769)
Q Consensus 561 V~Ey~~~gsL~~~l~~~--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFG 632 (769)
||||+++++|.+++... ...+++..+..++.|+++||+|||+. +++||||||+||+++.++.+|++|||
T Consensus 74 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg 150 (262)
T cd00192 74 VLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFG 150 (262)
T ss_pred EEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEcccc
Confidence 99999999999999864 35799999999999999999999998 99999999999999999999999999
Q ss_pred CchhhhccC----CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhcccccccc
Q 004195 633 LPLLAEARG----KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEAR 707 (769)
Q Consensus 633 la~~~~~~~----~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (769)
.+....... .........|.+||......++.++||||+||++|||++ |+.||...........+...
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~------- 223 (262)
T cd00192 151 LSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKG------- 223 (262)
T ss_pred cccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-------
Confidence 997654332 112223345778998877789999999999999999999 68998765433322222110
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 708 KSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 708 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
... ..+...+.++.+++.+|++.+|++|||+.|+++++.
T Consensus 224 ---~~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 224 ---YRL----PKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred ---CCC----CCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 001 111222345889999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=308.15 Aligned_cols=251 Identities=18% Similarity=0.239 Sum_probs=198.1
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC--CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK--SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
+|+..+.||+|++|.||+++.. +++.||+|++..... ...+.+.+|++++++++|+|++++++.+...+ ..
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~------~~ 74 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGED------GL 74 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCC------CE
Confidence 4778899999999999999965 688999999975432 23456888999999999999999998775321 24
Q ss_pred EEEEEeccCCCchhhhhcC-CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 558 IYLIFEYAPNETLRSFISG-PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
.++||||+++++|.+++.. ....+++.++..++.+++.|++|||+. +++||||||+||+++.++.++|+|||++..
T Consensus 75 ~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~ 151 (257)
T cd08223 75 LYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARV 151 (257)
T ss_pred EEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEE
Confidence 7899999999999999974 234689999999999999999999998 999999999999999999999999999865
Q ss_pred hhccCC--cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCcc
Q 004195 637 AEARGK--GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 637 ~~~~~~--~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
...... ........|++||...+..++.++|||||||+++||++|+.||............... . -+.
T Consensus 152 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~-----~-----~~~ 221 (257)
T cd08223 152 LENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEG-----K-----LPP 221 (257)
T ss_pred ecccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc-----C-----CCC
Confidence 532211 1122344678899888888999999999999999999999998754432211111000 0 011
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
.+......+.+++.+|++.+|++||++.++++|+|+
T Consensus 222 ----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 222 ----MPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred ----CccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 122233458899999999999999999999999985
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-36 Score=330.46 Aligned_cols=262 Identities=14% Similarity=0.174 Sum_probs=196.0
Q ss_pred hcCCCCcCccccCCceeEEEEEeC---CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT---DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~---~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
..+|...+.||+|+||.||+|... .+..||+|.+... +...+|++++++++|||||++++++....
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~------ 159 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKS------ 159 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCC------
Confidence 357999999999999999999753 3678999988643 34578999999999999999999887533
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+. ++|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 160 -~~~lv~e~~~-~~l~~~l~~~-~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~ 233 (392)
T PHA03207 160 -TVCMVMPKYK-CDLFTYVDRS-GPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAAC 233 (392)
T ss_pred -EEEEEehhcC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCcccc
Confidence 4899999996 6888888543 3799999999999999999999998 99999999999999999999999999986
Q ss_pred hhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchh----HHHHhhhhhcccccccc
Q 004195 636 LAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVV----VLVKDLLQVNIGTDEAR 707 (769)
Q Consensus 636 ~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~----~~~~~~~~~~~~~~~~~ 707 (769)
....... ....++..|++||.+....++.++|||||||++|||++|+.||.+... ..+..++..........
T Consensus 234 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~ 313 (392)
T PHA03207 234 KLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEF 313 (392)
T ss_pred ccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCcccc
Confidence 5433221 122345567889999888899999999999999999999988864321 11111111100000000
Q ss_pred cc-----------ccCccccCCCC-------HHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 708 KS-----------IVDPAVMNECS-------DESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 708 ~~-----------~~d~~~~~~~~-------~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.. .........+. .....++.+++.+|+..||++|||+.|++.|+||.+.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~ 381 (392)
T PHA03207 314 PQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKE 381 (392)
T ss_pred CCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhcc
Confidence 00 00000000000 0112357889999999999999999999999999754
|
|
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-36 Score=316.17 Aligned_cols=264 Identities=22% Similarity=0.374 Sum_probs=195.2
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC-ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS-SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|+..+.||+|++|.||+|+.+ +++.||||.+...... ....+.+|++++++++|+||+++++++.+.+ .
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-------~ 77 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKK-------T 77 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCC-------e
Confidence 56888899999999999999976 6899999998754322 2345778999999999999999999987643 4
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.++||||++ ++|.+++.+....+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 78 ~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 153 (291)
T cd07844 78 LTLVFEYLD-TDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAK 153 (291)
T ss_pred EEEEEecCC-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECcccccccc
Confidence 899999998 599999876555789999999999999999999998 9999999999999999999999999998543
Q ss_pred hccC--CcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchh--HHHHhhhhhc-ccccccccccc
Q 004195 638 EARG--KGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVV--VLVKDLLQVN-IGTDEARKSIV 711 (769)
Q Consensus 638 ~~~~--~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~--~~~~~~~~~~-~~~~~~~~~~~ 711 (769)
.... .........+.+||...+ ..++.++||||+||++|||++|++||..... .......... ......+....
T Consensus 154 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (291)
T cd07844 154 SVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVS 233 (291)
T ss_pred CCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhh
Confidence 2111 111123345677887654 4578999999999999999999999865431 1111111100 00000000000
Q ss_pred -------------Ccc-ccCCCC-HHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 712 -------------DPA-VMNECS-DESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 712 -------------d~~-~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
.+. +....+ ......+.+++.+|++.+|++|||+.|++.|+||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 234 SNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred hccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 000 000000 0011457899999999999999999999999986
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=305.14 Aligned_cols=244 Identities=20% Similarity=0.355 Sum_probs=193.4
Q ss_pred CccccCCceeEEEEEeCCCcEEEEEEccccCCC-ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEEEec
Q 004195 486 SFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKS-SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEY 564 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV~Ey 564 (769)
+.||+|+||.||+|...+++.||+|.+...... ..+.+.+|++++++++|+||+++++++.+... .++||||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~-------~~~v~e~ 73 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQP-------IYIVMEL 73 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCC-------eEEEEEc
Confidence 468999999999999877999999998765433 34578999999999999999999999876443 8999999
Q ss_pred cCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhccCCc-
Q 004195 565 APNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKG- 643 (769)
Q Consensus 565 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~- 643 (769)
+++++|.+++......+++..+..++.+++.||+|||+. +++||||||+||+++.++.+||+|||.++........
T Consensus 74 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~ 150 (251)
T cd05041 74 VPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTV 150 (251)
T ss_pred CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCccee
Confidence 999999999975545789999999999999999999998 9999999999999999999999999998654321111
Q ss_pred ---ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCccccCCC
Q 004195 644 ---SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNEC 719 (769)
Q Consensus 644 ---~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 719 (769)
.......|.+||...+..++.++|||||||++|||+| |..|+...........+.... .. ..
T Consensus 151 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~----------~~----~~ 216 (251)
T cd05041 151 SDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGY----------RM----PA 216 (251)
T ss_pred ccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCC----------CC----CC
Confidence 1111234678888877889999999999999999999 788886543322222211100 00 11
Q ss_pred CHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 720 SDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 720 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
+...+..+.+++.+|+..+|++|||+.|+++.+.
T Consensus 217 ~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 217 PQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred CccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 1222345899999999999999999999998774
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-36 Score=323.75 Aligned_cols=243 Identities=15% Similarity=0.168 Sum_probs=187.9
Q ss_pred cccCCceeEEEEEeC-CCcEEEEEEccccCCC---ChhHHHHHHHHHhhc---cCCceeeEeeeeeccCCCCCCcceEEE
Q 004195 488 MCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS---SPHMYTYHIELISKL---RHSNLVSALGHCLDFSLDDPSISIIYL 560 (769)
Q Consensus 488 iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~---~~~~~~~Ei~~l~~l---~H~nIv~l~~~~~~~~~~~~~~~~~~l 560 (769)
||+|+||+||+|+.. +|+.||||++...... ....+..|..++.+. +||||+++++++.+.. ..++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~-------~~~l 73 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDS-------DLYL 73 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCC-------eEEE
Confidence 799999999999975 6899999999653221 123455677777665 6999999999987644 3899
Q ss_pred EEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhcc
Q 004195 561 IFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEAR 640 (769)
Q Consensus 561 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~ 640 (769)
||||+++|+|.+++.+.+ .+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 74 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~ 149 (330)
T cd05586 74 VTDYMSGGELFWHLQKEG-RFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTD 149 (330)
T ss_pred EEcCCCCChHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCC
Confidence 999999999999987554 689999999999999999999998 9999999999999999999999999998643221
Q ss_pred C--CcceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCcccc-
Q 004195 641 G--KGSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM- 716 (769)
Q Consensus 641 ~--~~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~- 716 (769)
. .....++..|++||.+.+. .++.++|||||||++|||+||+.||...........+.. .. ..+.
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~--~~---------~~~~~ 218 (330)
T cd05586 150 NKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAF--GK---------VRFPK 218 (330)
T ss_pred CCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHc--CC---------CCCCC
Confidence 1 1223345567889987654 479999999999999999999999876543322211110 00 0010
Q ss_pred CCCCHHHHHHHHHHHHHcCcCCCCCCC----CHHHHHHHhHhhh
Q 004195 717 NECSDESLKRMMELCLRCLSNEPKDRP----SVEDTLWNLQFAT 756 (769)
Q Consensus 717 ~~~~~~~~~~l~~li~~cl~~dP~~RP----s~~evl~~l~~~~ 756 (769)
...+ ..+.+++.+||+.||++|| ++.++++|+|+..
T Consensus 219 ~~~~----~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~ 258 (330)
T cd05586 219 NVLS----DEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFAD 258 (330)
T ss_pred ccCC----HHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccC
Confidence 1122 3478899999999999998 7999999999864
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=316.23 Aligned_cols=255 Identities=19% Similarity=0.322 Sum_probs=196.8
Q ss_pred cCCCCcCccccCCceeEEEEEeC--------CCcEEEEEEccccC-CCChhHHHHHHHHHhhc-cCCceeeEeeeeeccC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT--------DGTLVAIRSLKMSK-KSSPHMYTYHIELISKL-RHSNLVSALGHCLDFS 549 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~--------~g~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~ 549 (769)
++|...+.||+|+||.||+|+.. ++..||+|.+.... ....+.+.+|+.+++.+ +||||+++++++....
T Consensus 15 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 94 (304)
T cd05101 15 DKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 94 (304)
T ss_pred HHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCC
Confidence 45778899999999999999741 24579999987432 22345788999999999 8999999999987643
Q ss_pred CCCCCcceEEEEEeccCCCchhhhhcCC---------------CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCcc
Q 004195 550 LDDPSISIIYLIFEYAPNETLRSFISGP---------------GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLK 614 (769)
Q Consensus 550 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlK 614 (769)
..++||||+++|+|.+++.+. ...++|.++..++.|+++||+|||+. +|+|||||
T Consensus 95 -------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlk 164 (304)
T cd05101 95 -------PLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLA 164 (304)
T ss_pred -------ceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---Ceeecccc
Confidence 379999999999999998742 13578999999999999999999998 99999999
Q ss_pred ccceeeCCCceeeecCCCCchhhhccCCc----ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCch
Q 004195 615 ITDVLLDENFHVKINSYNLPLLAEARGKG----SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENV 689 (769)
Q Consensus 615 p~NILld~~~~~kl~DFGla~~~~~~~~~----~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~ 689 (769)
|+||++++++.+||+|||+++........ .......|++||...+..++.++|||||||++|||+| |..|+....
T Consensus 165 p~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 244 (304)
T cd05101 165 ARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 244 (304)
T ss_pred cceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC
Confidence 99999999999999999998655322111 1111234778998888889999999999999999998 778876544
Q ss_pred hHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 690 VVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
.......+.... .......+ +..+.+++.+||+.+|++||++.|+++.+......
T Consensus 245 ~~~~~~~~~~~~----------~~~~~~~~----~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 245 VEELFKLLKEGH----------RMDKPANC----TNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred HHHHHHHHHcCC----------cCCCCCCC----CHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 333222221110 00011122 34488999999999999999999999999766443
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-36 Score=324.12 Aligned_cols=255 Identities=20% Similarity=0.284 Sum_probs=193.7
Q ss_pred cCCCCcCccccCCceeEEEEEe------CCCcEEEEEEccccCCC-ChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKL------TDGTLVAIRSLKMSKKS-SPHMYTYHIELISKL-RHSNLVSALGHCLDFSLD 551 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~ 551 (769)
++|...+.||+|+||.||+|+. .+++.||||+++..... ....+.+|+.++.++ +||||++++++|....
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~-- 84 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG-- 84 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCC--
Confidence 4688899999999999999973 24789999999754322 234688999999999 6899999999886532
Q ss_pred CCCcceEEEEEeccCCCchhhhhcCCC-----------------------------------------------------
Q 004195 552 DPSISIIYLIFEYAPNETLRSFISGPG----------------------------------------------------- 578 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~----------------------------------------------------- 578 (769)
...++||||+++|+|.+++....
T Consensus 85 ----~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (343)
T cd05103 85 ----GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSD 160 (343)
T ss_pred ----CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCcccc
Confidence 23789999999999999886311
Q ss_pred -------------CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhccCC---
Q 004195 579 -------------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGK--- 642 (769)
Q Consensus 579 -------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~--- 642 (769)
..++|..+.+++.|+++||+|||+. +|+||||||+||++++++++||+|||+++.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 237 (343)
T cd05103 161 VEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVR 237 (343)
T ss_pred chhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhh
Confidence 2368889999999999999999998 999999999999999999999999999865422111
Q ss_pred -cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhH-HHHhhhhhccccccccccccCccccCCC
Q 004195 643 -GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVV-LVKDLLQVNIGTDEARKSIVDPAVMNEC 719 (769)
Q Consensus 643 -~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 719 (769)
........|++||......++.++|||||||++|||++ |..|+...... .....+... ..+......
T Consensus 238 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~----------~~~~~~~~~ 307 (343)
T cd05103 238 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG----------TRMRAPDYT 307 (343)
T ss_pred cCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhcc----------CCCCCCCCC
Confidence 11112234678888888889999999999999999997 88888653211 111111000 000111112
Q ss_pred CHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 720 SDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 720 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
+ ..+.+++.+||+.||++|||+.|+++++....+
T Consensus 308 ~----~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 308 T----PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred C----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 2 348899999999999999999999999986643
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-36 Score=308.13 Aligned_cols=249 Identities=16% Similarity=0.260 Sum_probs=198.1
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC--CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK--SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
+|+..+.||+|+||.||+++.. +|+.||+|++..... ...+++.+|+.++++++||||+++++++.+.+ .
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-------~ 73 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENG-------N 73 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCC-------e
Confidence 4778899999999999999965 689999999875422 23457899999999999999999999987533 4
Q ss_pred EEEEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 558 IYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
.++||||+++++|.+++... ...+++.++.+++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++..
T Consensus 74 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~ 150 (256)
T cd08218 74 LYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARV 150 (256)
T ss_pred EEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceee
Confidence 89999999999999998743 33689999999999999999999998 999999999999999999999999999865
Q ss_pred hhccCC--cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccccccccccccCc
Q 004195 637 AEARGK--GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 637 ~~~~~~--~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~ 713 (769)
...... ....+...|.+||...+..++.++|||||||+++||+||+.|+....... ...+.... .+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~-----------~~ 219 (256)
T cd08218 151 LNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGS-----------YP 219 (256)
T ss_pred cCcchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCC-----------CC
Confidence 433211 11123345778998888888999999999999999999999986543222 11111100 01
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
.. +......+.+++.+||+.+|++||++.||++|+|+
T Consensus 220 ~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 220 PV----SSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred CC----cccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 11 12223348899999999999999999999999985
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=308.52 Aligned_cols=254 Identities=17% Similarity=0.235 Sum_probs=199.1
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
+|+..+.||+|+||.||+|... +|+.||+|.+...... ..+.+..|++++++++||||+++++++.... ...
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~ 75 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRS-----NQT 75 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCC-----CCE
Confidence 4777899999999999999865 7889999998754322 2346888999999999999999999876422 234
Q ss_pred EEEEEeccCCCchhhhhcC---CCCCCCHHHHHHHHHHHHHHhcccccCC--CCCccccCccccceeeCCCceeeecCCC
Q 004195 558 IYLIFEYAPNETLRSFISG---PGYKLTWVQRIAAAIAIVKGVQFLHTGI--VPGVFSNNLKITDVLLDENFHVKINSYN 632 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~ivHrDlKp~NILld~~~~~kl~DFG 632 (769)
.+++|||+++++|.+++.. ....+++..++.++.|+++||+|||..+ ..+++||||||+||++++++.+|++|||
T Consensus 76 ~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g 155 (265)
T cd08217 76 LYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFG 155 (265)
T ss_pred EEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccc
Confidence 7999999999999999863 2447899999999999999999999221 2299999999999999999999999999
Q ss_pred CchhhhccCC--cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccc
Q 004195 633 LPLLAEARGK--GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSI 710 (769)
Q Consensus 633 la~~~~~~~~--~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (769)
++........ ........+.+||......++.++||||||+++|+|++|+.|+...........+...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---------- 225 (265)
T cd08217 156 LAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEG---------- 225 (265)
T ss_pred ccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcC----------
Confidence 9876543331 1223345677899888888999999999999999999999998765433222211110
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 711 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
..+ ..+......+.+++.+|++.+|++||++++|++|++
T Consensus 226 ~~~----~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~ 264 (265)
T cd08217 226 KFR----RIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPL 264 (265)
T ss_pred CCC----CCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCC
Confidence 011 112223345889999999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=306.41 Aligned_cols=247 Identities=20% Similarity=0.348 Sum_probs=196.2
Q ss_pred CCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEE
Q 004195 481 CFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYL 560 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~l 560 (769)
+|+..+.||+|+||.||+|...++..+|+|.+.... ....++.+|++++++++||||+++++++.... ..++
T Consensus 5 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-------~~~~ 76 (256)
T cd05112 5 ELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERS-------PICL 76 (256)
T ss_pred HeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCC-------ceEE
Confidence 566779999999999999998778899999987442 33567999999999999999999999987543 3799
Q ss_pred EEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhcc
Q 004195 561 IFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEAR 640 (769)
Q Consensus 561 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~ 640 (769)
||||+++++|.+++......+++..+..++.+++.|++|||+. +++||||||+||+++.++.+||+|||.++.....
T Consensus 77 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~ 153 (256)
T cd05112 77 VFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDD 153 (256)
T ss_pred EEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccC
Confidence 9999999999999986545689999999999999999999998 9999999999999999999999999998644322
Q ss_pred CCc---ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCcccc
Q 004195 641 GKG---SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM 716 (769)
Q Consensus 641 ~~~---~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 716 (769)
... .......|.+||...+..++.++|||||||++|||++ |+.||...........+... .....+.
T Consensus 154 ~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-------~~~~~~~-- 224 (256)
T cd05112 154 QYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAG-------FRLYKPR-- 224 (256)
T ss_pred cccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCC-------CCCCCCC--
Confidence 111 1112235678998888889999999999999999998 89998754433222211110 0111111
Q ss_pred CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHh
Q 004195 717 NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNL 752 (769)
Q Consensus 717 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 752 (769)
.. ...+.+++.+||+.+|++|||+.|+++++
T Consensus 225 -~~----~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 225 -LA----SQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred -CC----CHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 12 23488999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-36 Score=315.69 Aligned_cols=262 Identities=19% Similarity=0.254 Sum_probs=193.7
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC--CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK--SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
+|+..+.||+|+||.||+|+.. +|+.||+|+++.... .....+.+|++++++++||||+++++++.+.. .
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~-------~ 73 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDK-------K 73 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCC-------c
Confidence 4777889999999999999975 699999999975422 22356788999999999999999999987643 3
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.++|+||++ ++|.+++......+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 74 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~ 149 (284)
T cd07839 74 LTLVFEYCD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAF 149 (284)
T ss_pred eEEEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhcc
Confidence 899999997 588888765445799999999999999999999998 9999999999999999999999999998654
Q ss_pred hccCC--cceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCC-chhH-HHHhhhhhccccc--ccc---
Q 004195 638 EARGK--GSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSE-NVVV-LVKDLLQVNIGTD--EAR--- 707 (769)
Q Consensus 638 ~~~~~--~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~-~~~~-~~~~~~~~~~~~~--~~~--- 707 (769)
..... ........|.+||.+.+. .++.++|||||||++|||+||+.|+.. .... ....+.. ..... ..+
T Consensus 150 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 228 (284)
T cd07839 150 GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFR-LLGTPTEESWPGV 228 (284)
T ss_pred CCCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHH-HhCCCChHHhHHh
Confidence 32211 112234456788877654 468999999999999999999877533 2211 1111111 00000 000
Q ss_pred ccccCc----ccc-----CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 708 KSIVDP----AVM-----NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 708 ~~~~d~----~~~-----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
....+. ... ....+....++.+++.+||+.||++|||++|+++|+||
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 229 SKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred hhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 000000 000 00111234568899999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=308.19 Aligned_cols=252 Identities=17% Similarity=0.274 Sum_probs=197.1
Q ss_pred CCCCcCccccCCceeEEEEEeCC----CcEEEEEEccccC-CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 481 CFDSSSFMCDASHGQIYKGKLTD----GTLVAIRSLKMSK-KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~~----g~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
+|...+.||+|+||.||+|...+ ...||||...... ....+.+.+|+.++++++||||++++++|.+..
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~------ 80 (270)
T cd05056 7 DITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITENP------ 80 (270)
T ss_pred hceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCCC------
Confidence 46778999999999999998643 3479999887543 223457899999999999999999999987522
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
.++||||+++|+|.+++......+++..+..++.+++.||+|||+. +++||||||+||+++.++.+|++|||+++
T Consensus 81 --~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~ 155 (270)
T cd05056 81 --VWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSR 155 (270)
T ss_pred --cEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceee
Confidence 5899999999999999986555789999999999999999999998 99999999999999999999999999986
Q ss_pred hhhccCCc---ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhcccccccccccc
Q 004195 636 LAEARGKG---SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIV 711 (769)
Q Consensus 636 ~~~~~~~~---~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (769)
........ .......|.+||......++.++|||||||++||+++ |+.||...........+... .
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~----~------ 225 (270)
T cd05056 156 YLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENG----E------ 225 (270)
T ss_pred ecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC----C------
Confidence 55332111 1111234678888877889999999999999999996 99998765433222211110 0
Q ss_pred CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 712 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.......++ ..+.+++.+|+..+|++|||+.++++.+.....
T Consensus 226 ~~~~~~~~~----~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 226 RLPMPPNCP----PTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred cCCCCCCCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 011112233 348899999999999999999999999886543
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=325.69 Aligned_cols=251 Identities=20% Similarity=0.271 Sum_probs=192.8
Q ss_pred CCCCcCccccCCceeEEEEEeC------CCcEEEEEEccccCCCC-hhHHHHHHHHHhhcc-CCceeeEeeeeeccCCCC
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT------DGTLVAIRSLKMSKKSS-PHMYTYHIELISKLR-HSNLVSALGHCLDFSLDD 552 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~~~~~~~~~-~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~ 552 (769)
+|...+.||+|+||.||+|++. .++.||||+++...... .+.+.+|++++.++. |||||+++++|.+..
T Consensus 38 ~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~--- 114 (401)
T cd05107 38 NLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG--- 114 (401)
T ss_pred HeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC---
Confidence 4667899999999999999853 34689999998543222 346889999999997 999999999997643
Q ss_pred CCcceEEEEEeccCCCchhhhhcCCC------------------------------------------------------
Q 004195 553 PSISIIYLIFEYAPNETLRSFISGPG------------------------------------------------------ 578 (769)
Q Consensus 553 ~~~~~~~lV~Ey~~~gsL~~~l~~~~------------------------------------------------------ 578 (769)
..++||||+++|+|.+++++..
T Consensus 115 ----~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (401)
T cd05107 115 ----PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYV 190 (401)
T ss_pred ----CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCcc
Confidence 3899999999999999986321
Q ss_pred -------------------------------------------CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccc
Q 004195 579 -------------------------------------------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKI 615 (769)
Q Consensus 579 -------------------------------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp 615 (769)
..++|..+.+++.|+++||+|||+. +|+||||||
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp 267 (401)
T cd05107 191 PMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAA 267 (401)
T ss_pred chhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCc
Confidence 2467888999999999999999998 999999999
Q ss_pred cceeeCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchh
Q 004195 616 TDVLLDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVV 690 (769)
Q Consensus 616 ~NILld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~ 690 (769)
+|||+++++.+|++|||+++....... .....+..|++||......++.++|||||||++|||++ |+.|+.....
T Consensus 268 ~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~ 347 (401)
T cd05107 268 RNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPM 347 (401)
T ss_pred ceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCc
Confidence 999999999999999999865422111 11122334678888888889999999999999999998 8888764322
Q ss_pred HH-HHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 691 VL-VKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 691 ~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
.. ....+... ..+.....+ ..++.+++.+||..+|++||+++||++.+...
T Consensus 348 ~~~~~~~~~~~----------~~~~~p~~~----~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 348 NEQFYNAIKRG----------YRMAKPAHA----SDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred hHHHHHHHHcC----------CCCCCCCCC----CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 11 11111100 001111122 33488999999999999999999999988643
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-36 Score=315.42 Aligned_cols=250 Identities=18% Similarity=0.280 Sum_probs=198.1
Q ss_pred CcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEEE
Q 004195 484 SSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIF 562 (769)
Q Consensus 484 ~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV~ 562 (769)
....||+|+||.||+|+.. +++.||+|.+........+.+.+|+.+++.++||||+++++++...+ ..++||
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~-------~~~iv~ 97 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGE-------ELWVLM 97 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCC-------eEEEEE
Confidence 3457999999999999965 68999999997655555667889999999999999999999987643 389999
Q ss_pred eccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhccC-
Q 004195 563 EYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARG- 641 (769)
Q Consensus 563 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~~- 641 (769)
||+++++|.+++... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 98 e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~ 172 (297)
T cd06659 98 EFLQGGALTDIVSQT--RLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP 172 (297)
T ss_pred ecCCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhcccccc
Confidence 999999999987653 589999999999999999999998 99999999999999999999999999986543221
Q ss_pred -CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccCCCC
Q 004195 642 -KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECS 720 (769)
Q Consensus 642 -~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 720 (769)
.........|.+||...+..++.++|||||||++|||++|++||...........+... ... ........+
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~--~~~------~~~~~~~~~ 244 (297)
T cd06659 173 KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDS--PPP------KLKNAHKIS 244 (297)
T ss_pred cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcc--CCC------CccccCCCC
Confidence 12223345678899888888999999999999999999999998654322221111100 000 000011222
Q ss_pred HHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 721 DESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 721 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
..+.+++.+|++.+|++||+++++++|+|+.+.
T Consensus 245 ----~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~ 277 (297)
T cd06659 245 ----PVLRDFLERMLTREPQERATAQELLDHPFLLQT 277 (297)
T ss_pred ----HHHHHHHHHHhcCCcccCcCHHHHhhChhhccC
Confidence 347889999999999999999999999998754
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=306.11 Aligned_cols=244 Identities=20% Similarity=0.273 Sum_probs=191.7
Q ss_pred CccccCCceeEEEEEeCC--Cc--EEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEE
Q 004195 486 SFMCDASHGQIYKGKLTD--GT--LVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYL 560 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~~--g~--~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~l 560 (769)
+.||+|++|.||+|.+.+ ++ .||||.+..... ...+.+.+|++++++++||||+++++++.+ . ..++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~-------~~~~ 72 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-H-------PLMM 72 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-C-------eEEE
Confidence 468999999999998643 33 699999986654 345678999999999999999999999875 2 3799
Q ss_pred EEeccCCCchhhhhcCCC-CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhc
Q 004195 561 IFEYAPNETLRSFISGPG-YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEA 639 (769)
Q Consensus 561 V~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~ 639 (769)
||||+++|+|.+++.+.. ..++|..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||+++....
T Consensus 73 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~ 149 (257)
T cd05040 73 VTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQ 149 (257)
T ss_pred EEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccccc
Confidence 999999999999997543 4789999999999999999999998 999999999999999999999999999876543
Q ss_pred cCC-----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCc
Q 004195 640 RGK-----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 640 ~~~-----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
... ........|.+||......++.++|||||||++|||+| |+.|+...........+... .. ..
T Consensus 150 ~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~---~~------~~ 220 (257)
T cd05040 150 NEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKE---GE------RL 220 (257)
T ss_pred cccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhc---CC------cC
Confidence 211 11122345778998888889999999999999999999 99998654332222211110 00 00
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
. .+...+..+.+++.+|++.+|++||++.|+++.+.
T Consensus 221 ~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 221 E----RPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred C----CCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 0 11122345889999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=308.41 Aligned_cols=245 Identities=24% Similarity=0.387 Sum_probs=187.5
Q ss_pred CccccCCceeEEEEEeC-CCc--EEEEEEccccC-CCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCCcceEEE
Q 004195 486 SFMCDASHGQIYKGKLT-DGT--LVAIRSLKMSK-KSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPSISIIYL 560 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~-~g~--~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~~~l 560 (769)
+.||+|+||.||+|+.. ++. .+|+|.++... ....+.+.+|++++.++ +||||++++++|...+. .++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~-------~~l 73 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY-------LYL 73 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCC-------ceE
Confidence 46899999999999975 444 57888887432 22345788999999999 79999999999976443 799
Q ss_pred EEeccCCCchhhhhcCCC---------------CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCce
Q 004195 561 IFEYAPNETLRSFISGPG---------------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH 625 (769)
Q Consensus 561 V~Ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~ 625 (769)
||||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +++||||||+||++++++.
T Consensus 74 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~ 150 (270)
T cd05047 74 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV 150 (270)
T ss_pred EEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCe
Confidence 999999999999986321 2478999999999999999999998 9999999999999999999
Q ss_pred eeecCCCCchhhhccCCcc-eeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhcccc
Q 004195 626 VKINSYNLPLLAEARGKGS-AEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGT 703 (769)
Q Consensus 626 ~kl~DFGla~~~~~~~~~~-~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~ 703 (769)
+|++|||++.......... ......|.+||......++.++|||||||++|||+| |+.||...........+...
T Consensus 151 ~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~--- 227 (270)
T cd05047 151 AKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG--- 227 (270)
T ss_pred EEECCCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCC---
Confidence 9999999985322111111 111234778998878889999999999999999997 99998654322221111100
Q ss_pred ccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 704 DEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 704 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
......... ...+.+++.+||+.+|.+|||+.|+++.+..
T Consensus 228 -------~~~~~~~~~----~~~~~~li~~~l~~~p~~Rps~~~il~~l~~ 267 (270)
T cd05047 228 -------YRLEKPLNC----DDEVYDLMRQCWREKPYERPSFAQILVSLNR 267 (270)
T ss_pred -------CCCCCCCcC----CHHHHHHHHHHcccChhhCCCHHHHHHHHHH
Confidence 000111122 2348899999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-35 Score=312.34 Aligned_cols=257 Identities=19% Similarity=0.296 Sum_probs=190.9
Q ss_pred cCCCCcCccccCCceeEEEEEeC-----------------CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-----------------DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSA 541 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-----------------~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l 541 (769)
++|+..+.||+|+||.||++... ++..||+|.++.... ....++.+|++++++++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 46888899999999999998532 244799999975432 234578999999999999999999
Q ss_pred eeeeeccCCCCCCcceEEEEEeccCCCchhhhhcCCC----------CCCCHHHHHHHHHHHHHHhcccccCCCCCcccc
Q 004195 542 LGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPG----------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSN 611 (769)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~----------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHr 611 (769)
++++.+.+. .++||||+++|+|.+++.... ..+++.++.+++.|++.||+|||+. +++||
T Consensus 85 ~~~~~~~~~-------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~ 154 (296)
T cd05095 85 LAVCITSDP-------LCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHR 154 (296)
T ss_pred EEEEecCCc-------cEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---Ceecc
Confidence 999876443 799999999999999986321 2478889999999999999999998 99999
Q ss_pred CccccceeeCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh--CCCCC
Q 004195 612 NLKITDVLLDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV--GRPIT 685 (769)
Q Consensus 612 DlKp~NILld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt--G~~p~ 685 (769)
||||+||++++++.+|++|||+++....... +.......+++||......++.++|||||||++|||+| |..|+
T Consensus 155 dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~ 234 (296)
T cd05095 155 DLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPY 234 (296)
T ss_pred cCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCc
Confidence 9999999999999999999999865432211 11111234567887777889999999999999999998 66777
Q ss_pred CCchhHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 686 SENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
.................. .......+. ...+ +..+.+++.+||+.||++||++.||++.+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~----~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 235 SQLSDEQVIENTGEFFRD--QGRQVYLPK-PALC----PDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred cccChHHHHHHHHHHHhh--ccccccCCC-CCCC----CHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 543322111100000000 000000011 1122 245889999999999999999999998774
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=310.17 Aligned_cols=254 Identities=17% Similarity=0.314 Sum_probs=193.8
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC--CC--------hhHHHHHHHHHhhccCCceeeEeeeeeccC
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK--SS--------PHMYTYHIELISKLRHSNLVSALGHCLDFS 549 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~--~~--------~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~ 549 (769)
+|...+.||+|+||.||+|... +|+.||+|.++.... .. .+.+.+|+.++++++||||+++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 3667889999999999999865 689999998864311 11 135788999999999999999999987643
Q ss_pred CCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeec
Q 004195 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKIN 629 (769)
Q Consensus 550 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~ 629 (769)
..++||||+++++|.+++.+.+ .+++..+..++.|++.||+|||+. +++||||||+||++++++.+|++
T Consensus 82 -------~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~ 150 (272)
T cd06629 82 -------YLSIFLEYVPGGSIGSCLRTYG-RFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKIS 150 (272)
T ss_pred -------ceEEEEecCCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEe
Confidence 3899999999999999998654 689999999999999999999998 99999999999999999999999
Q ss_pred CCCCchhhhccCC----cceeecCCCcchhhhccCC--CCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccc
Q 004195 630 SYNLPLLAEARGK----GSAEVSSPAKKTSVLARTE--QDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGT 703 (769)
Q Consensus 630 DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~--~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~ 703 (769)
|||+++....... ........|.+||...... ++.++||||||+++||+++|+.|+....... .......
T Consensus 151 d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~~-- 226 (272)
T cd06629 151 DFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIA--AMFKLGN-- 226 (272)
T ss_pred eccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHH--HHHHhhc--
Confidence 9999865432111 1112234566788766544 7899999999999999999999986433211 1111000
Q ss_pred ccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 704 DEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 704 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
. .....+++.... +....+.+++.+||..+|++||+++||++|+|+
T Consensus 227 ~-~~~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 227 K-RSAPPIPPDVSM----NLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred c-ccCCcCCccccc----cCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 0 000011111112 223458899999999999999999999999985
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=305.91 Aligned_cols=247 Identities=20% Similarity=0.326 Sum_probs=187.6
Q ss_pred CccccCCceeEEEEEeC----CCcEEEEEEccccC-CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEE
Q 004195 486 SFMCDASHGQIYKGKLT----DGTLVAIRSLKMSK-KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYL 560 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~----~g~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~l 560 (769)
+.||+|+||.||+|... ++..||+|++.... ....+.+.+|+.+++.++||||++++++|...+ +..++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~------~~~~l 74 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSE------GSPLV 74 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCC------CCcEE
Confidence 46899999999999853 24579999986432 222457888999999999999999999886432 23689
Q ss_pred EEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhcc
Q 004195 561 IFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEAR 640 (769)
Q Consensus 561 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~ 640 (769)
||||+++|+|.+++.+....+++..+..++.|+++||+|||+. +++||||||+||++++++.+||+|||+++.....
T Consensus 75 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~ 151 (262)
T cd05058 75 VLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDK 151 (262)
T ss_pred EEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCC
Confidence 9999999999999986555678888999999999999999998 9999999999999999999999999998654321
Q ss_pred CC------cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhC-CCCCCCchhHHHHhhhhhccccccccccccCc
Q 004195 641 GK------GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVG-RPITSENVVVLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 641 ~~------~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
.. ........|++||......++.++|||||||++|||++| .+|+...........+... ..+
T Consensus 152 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~----------~~~ 221 (262)
T cd05058 152 EYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQG----------RRL 221 (262)
T ss_pred cceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC----------CCC
Confidence 11 111122346788988788899999999999999999995 5666543322221111100 001
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
.....++ ..+.+++.+||+.+|++||++.|+++.+...
T Consensus 222 ~~~~~~~----~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~ 259 (262)
T cd05058 222 LQPEYCP----DPLYEVMLSCWHPKPEMRPTFSELVSRIEQI 259 (262)
T ss_pred CCCCcCC----HHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 1111222 3488999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=313.34 Aligned_cols=251 Identities=21% Similarity=0.311 Sum_probs=194.2
Q ss_pred hcCCCCcCccccCCceeEEEEEeC------CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT------DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLD 551 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~ 551 (769)
.++|+..+.||+|+||.||+|+.. ++..||+|.+..... ...+++.+|+.++++++||||++++++|.+...
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~- 82 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKP- 82 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCc-
Confidence 457888999999999999999853 467899999875432 223568899999999999999999999876433
Q ss_pred CCCcceEEEEEeccCCCchhhhhcCC---------------------CCCCCHHHHHHHHHHHHHHhcccccCCCCCccc
Q 004195 552 DPSISIIYLIFEYAPNETLRSFISGP---------------------GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFS 610 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~~~---------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH 610 (769)
.++||||+++|+|.+++... ...+++.+++.++.|++.||+|||+. +++|
T Consensus 83 ------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H 153 (288)
T cd05050 83 ------MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVH 153 (288)
T ss_pred ------cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---Ceec
Confidence 79999999999999998622 12478899999999999999999998 9999
Q ss_pred cCccccceeeCCCceeeecCCCCchhhhccC----CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCC
Q 004195 611 NNLKITDVLLDENFHVKINSYNLPLLAEARG----KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPIT 685 (769)
Q Consensus 611 rDlKp~NILld~~~~~kl~DFGla~~~~~~~----~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~ 685 (769)
|||||+||++++++.+|++|||+++...... .........|.+||...+..++.++|||||||++|||++ |..||
T Consensus 154 ~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~ 233 (288)
T cd05050 154 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPY 233 (288)
T ss_pred ccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999986432211 111112234778998888889999999999999999998 87777
Q ss_pred CCchhHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 686 SENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
.+.........+.. .. . . ..++..+.++.+++.+|++.+|++|||+.|+++.++
T Consensus 234 ~~~~~~~~~~~~~~----~~----~--~----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 234 YGMAHEEVIYYVRD----GN----V--L----SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred CCCCHHHHHHHHhc----CC----C--C----CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 54332222111110 00 0 0 011122345889999999999999999999998775
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-35 Score=305.75 Aligned_cols=255 Identities=17% Similarity=0.258 Sum_probs=198.9
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC---CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK---SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|+..+.||+|+||.||+|... +|+.||+|.++.... ...+.+.+|++++++++|+||+++++++.+..
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~------ 75 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENN------ 75 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCC------
Confidence 57888999999999999999976 799999999874322 22457889999999999999999999987643
Q ss_pred ceEEEEEeccCCCchhhhhcC---CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCC
Q 004195 556 SIIYLIFEYAPNETLRSFISG---PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYN 632 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFG 632 (769)
..++||||+++|+|.+++.. ....+++.++..++.++++||+|||+. +|+||||||+||+++.++.++++|||
T Consensus 76 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~ 151 (267)
T cd08224 76 -ELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred -eEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccc
Confidence 38999999999999998862 234689999999999999999999998 99999999999999999999999999
Q ss_pred CchhhhccCC--cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccc
Q 004195 633 LPLLAEARGK--GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSI 710 (769)
Q Consensus 633 la~~~~~~~~--~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (769)
++........ ........|.+||...+..++.++|||||||++|||++|+.|+........ ..... .. ...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~-~~-----~~~ 224 (267)
T cd08224 152 LGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY-SLCKK-IE-----KCD 224 (267)
T ss_pred eeeeccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHH-HHHhh-hh-----cCC
Confidence 9865433221 112233456789988888899999999999999999999999864432111 11100 00 000
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 711 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
. +... .......+.+++.+||..+|++|||+.+|++.+...
T Consensus 225 ~-~~~~---~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~ 265 (267)
T cd08224 225 Y-PPLP---ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM 265 (267)
T ss_pred C-CCCC---hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence 0 1111 112334588999999999999999999999887643
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=316.53 Aligned_cols=259 Identities=21% Similarity=0.297 Sum_probs=186.3
Q ss_pred cCccccCCceeEEEEEeC---CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEE
Q 004195 485 SSFMCDASHGQIYKGKLT---DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLI 561 (769)
Q Consensus 485 ~~~iG~G~~g~Vy~~~~~---~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV 561 (769)
...||+|+||.||+|+.. ++..||+|.+.... ....+.+|++++++++||||+++++++.... ....++|
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~~~~lv 78 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHS-----DRKVWLL 78 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccC-----CCeEEEE
Confidence 468999999999999965 35789999987432 2356889999999999999999999986532 2347999
Q ss_pred EeccCCCchhhhhcC--------CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceee----CCCceeeec
Q 004195 562 FEYAPNETLRSFISG--------PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLL----DENFHVKIN 629 (769)
Q Consensus 562 ~Ey~~~gsL~~~l~~--------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl----d~~~~~kl~ 629 (769)
|||++ ++|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||++ ++++.+||+
T Consensus 79 ~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~ 154 (317)
T cd07867 79 FDYAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIA 154 (317)
T ss_pred EeeeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEe
Confidence 99997 477777641 123588999999999999999999998 99999999999999 566899999
Q ss_pred CCCCchhhhccCC-----cceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhH----------HH
Q 004195 630 SYNLPLLAEARGK-----GSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVV----------LV 693 (769)
Q Consensus 630 DFGla~~~~~~~~-----~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~----------~~ 693 (769)
|||+++....... ....++..|++||.+.+ ..++.++|||||||++|||+||++||.....+ ..
T Consensus 155 DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~ 234 (317)
T cd07867 155 DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQL 234 (317)
T ss_pred eccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHH
Confidence 9999976533211 12234556788998765 45799999999999999999999998643211 01
Q ss_pred Hhhhhh-cccccccccccc-------------C-----ccc---cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHH
Q 004195 694 KDLLQV-NIGTDEARKSIV-------------D-----PAV---MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWN 751 (769)
Q Consensus 694 ~~~~~~-~~~~~~~~~~~~-------------d-----~~~---~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 751 (769)
..+... .....+.+.++. . +.. ...........+.+++.+|++.||.+|||+.|+++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~h 314 (317)
T cd07867 235 DRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQD 314 (317)
T ss_pred HHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcC
Confidence 111100 000000000000 0 000 000000112347889999999999999999999999
Q ss_pred hHh
Q 004195 752 LQF 754 (769)
Q Consensus 752 l~~ 754 (769)
+||
T Consensus 315 p~f 317 (317)
T cd07867 315 PYF 317 (317)
T ss_pred CCC
Confidence 986
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=294.04 Aligned_cols=261 Identities=16% Similarity=0.163 Sum_probs=207.4
Q ss_pred HhcCCCC-cCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCC
Q 004195 478 ATDCFDS-SSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 478 ~t~~f~~-~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~ 554 (769)
.|++|++ .++||-|-.|.|-.+..+ +|+.+|+|++... ....+|+++.-+. .|||||+++++|..... .
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~---~ 130 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQ---G 130 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhcc---C
Confidence 5667765 478999999999999876 7999999999633 4578899987766 59999999999975433 2
Q ss_pred cceEEEEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC---CceeeecC
Q 004195 555 ISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE---NFHVKINS 630 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---~~~~kl~D 630 (769)
...+.+|||.|+||.|+..+..+ ...+++.+.-.|+.||+.|++|||+. +|.||||||+|+|... +-..|++|
T Consensus 131 rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtD 207 (400)
T KOG0604|consen 131 RKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTD 207 (400)
T ss_pred ceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEecc
Confidence 45688999999999999999844 34699999999999999999999999 9999999999999954 45699999
Q ss_pred CCCchhhh-ccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccccc
Q 004195 631 YNLPLLAE-ARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKS 709 (769)
Q Consensus 631 FGla~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (769)
||+|+... .....+.+++.+|.+||++...+|+..+|+||+||++|-|+.|.|||.......+..-+...+.. .-
T Consensus 208 fGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~--gq-- 283 (400)
T KOG0604|consen 208 FGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRT--GQ-- 283 (400)
T ss_pred cccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhc--cC--
Confidence 99997654 33445667888888999998889999999999999999999999999865432111111100000 00
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 710 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
-.+..+...+.++...++|+.++..+|.+|.|+.|++.|+|...
T Consensus 284 ---y~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~ 327 (400)
T KOG0604|consen 284 ---YEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQ 327 (400)
T ss_pred ---ccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcc
Confidence 11112234456778999999999999999999999999999754
|
|
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=310.14 Aligned_cols=255 Identities=21% Similarity=0.307 Sum_probs=199.1
Q ss_pred hcCCCCcCccccCCceeEEEEEeCC-----CcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLTD-----GTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD 552 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~~-----g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~ 552 (769)
.++|...+.||+|+||.||+|...+ +..||+|++..... ...+.+.+|+.++++++||||+++++++....
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~--- 81 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDG--- 81 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC---
Confidence 4568888999999999999999764 68899999874422 22456889999999999999999999987532
Q ss_pred CCcceEEEEEeccCCCchhhhhcCCC-------CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCce
Q 004195 553 PSISIIYLIFEYAPNETLRSFISGPG-------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH 625 (769)
Q Consensus 553 ~~~~~~~lV~Ey~~~gsL~~~l~~~~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~ 625 (769)
...++++||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +++||||||+||++++++.
T Consensus 82 ---~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~ 155 (280)
T cd05043 82 ---EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQ 155 (280)
T ss_pred ---CCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCc
Confidence 23699999999999999986321 4689999999999999999999998 9999999999999999999
Q ss_pred eeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhc
Q 004195 626 VKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVN 700 (769)
Q Consensus 626 ~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~ 700 (769)
+||+|||+++....... ........|++||......++.++|||||||++||+++ |+.||...........+...
T Consensus 156 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~ 235 (280)
T cd05043 156 VKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDG 235 (280)
T ss_pred EEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcC
Confidence 99999999975432211 11112335778998888889999999999999999999 99998764433222222111
Q ss_pred cccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 701 IGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 701 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
. .......++ .++.+++.+||+.||++|||+.|+++.+....
T Consensus 236 ~----------~~~~~~~~~----~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~ 277 (280)
T cd05043 236 Y----------RLAQPINCP----DELFAVMACCWALDPEERPSFSQLVQCLTDFH 277 (280)
T ss_pred C----------CCCCCCcCC----HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 0 111111223 34889999999999999999999999887654
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-35 Score=305.85 Aligned_cols=250 Identities=24% Similarity=0.391 Sum_probs=198.5
Q ss_pred hcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
.++|...+.||+|+||.||+|..+++..||||.+.... ...+++.+|+.++++++|+||+++++++.+... .
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-------~ 76 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEP-------I 76 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCc-------e
Confidence 35688889999999999999998878899999987543 345789999999999999999999999875332 7
Q ss_pred EEEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 559 YLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
++||||+++++|.+++... +..+++.++..++.+++.|++|||+. +++||||||+||++++++.+|++|||.++..
T Consensus 77 ~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~ 153 (261)
T cd05034 77 YIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLI 153 (261)
T ss_pred EEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceec
Confidence 9999999999999999753 34689999999999999999999998 9999999999999999999999999998654
Q ss_pred hccCC---cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCc
Q 004195 638 EARGK---GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 638 ~~~~~---~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
..... ........|.+||...+..++.++|||||||++||++| |+.||...........+.... ..
T Consensus 154 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~----------~~ 223 (261)
T cd05034 154 EDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGY----------RM 223 (261)
T ss_pred cchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC----------CC
Confidence 32111 11112235778998888889999999999999999999 999986544322222111110 01
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
...... +..+.+++.+|++.+|++||+++++.+-++
T Consensus 224 ~~~~~~----~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~ 259 (261)
T cd05034 224 PRPPNC----PEELYDLMLQCWDKDPEERPTFEYLQSFLE 259 (261)
T ss_pred CCCCCC----CHHHHHHHHHHcccCcccCCCHHHHHHHHh
Confidence 111122 334889999999999999999999987664
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=313.84 Aligned_cols=266 Identities=20% Similarity=0.304 Sum_probs=198.3
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
++|+..+.||+|+||.||+|+.. +++.||+|.++..... ....+.+|++++++++||||+++++++.... ..
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~-----~~ 79 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSN-----LD 79 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecC-----CC
Confidence 46888899999999999999976 6899999999755322 2345778999999999999999999987542 13
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++||||++ ++|.+++......+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++.
T Consensus 80 ~~~lv~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~ 155 (293)
T cd07843 80 KIYMVMEYVE-HDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLARE 155 (293)
T ss_pred cEEEEehhcC-cCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceee
Confidence 4899999997 599998875555799999999999999999999998 999999999999999999999999999865
Q ss_pred hhccC--CcceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhcc-cccccc----
Q 004195 637 AEARG--KGSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNI-GTDEAR---- 707 (769)
Q Consensus 637 ~~~~~--~~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~-~~~~~~---- 707 (769)
..... .........|++||.+.+. .++.++|||||||++|||++|++||....... ......... .....+
T Consensus 156 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (293)
T cd07843 156 YGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFS 235 (293)
T ss_pred ccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhh
Confidence 53321 1122234457788877544 46899999999999999999999987543221 111111000 000000
Q ss_pred ----------ccccCccccCCCCHH-HHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 708 ----------KSIVDPAVMNECSDE-SLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 708 ----------~~~~d~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
.......+...++.. ..+.+.+++.+||+.+|++|||+.|++.|.||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 236 ELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred ccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 000000111111111 24558899999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=308.22 Aligned_cols=253 Identities=15% Similarity=0.222 Sum_probs=196.4
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC---ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS---SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~---~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|+..+.||+|++|.||+|... +|+.||||.+...... ...++.+|+.+++.++||||+++++++.+.+
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~------ 75 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN------ 75 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCC------
Confidence 46778899999999999999964 7999999988654322 2357889999999999999999999987643
Q ss_pred ceEEEEEeccCCCchhhhhcC---CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCC
Q 004195 556 SIIYLIFEYAPNETLRSFISG---PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYN 632 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFG 632 (769)
..+++|||+++++|.+++.. ....+++..+..++.|+++||+|||+. +++|+||||+||+++.++.++++|||
T Consensus 76 -~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg 151 (267)
T cd08229 76 -ELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred -eEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcch
Confidence 38999999999999998862 234689999999999999999999998 99999999999999999999999999
Q ss_pred CchhhhccCC--cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccc
Q 004195 633 LPLLAEARGK--GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSI 710 (769)
Q Consensus 633 la~~~~~~~~--~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (769)
++........ ........+.+||......++.++||||||+++|||++|..||........ ..... ....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~~~~-------~~~~ 223 (267)
T cd08229 152 LGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY-SLCKK-------IEQC 223 (267)
T ss_pred hhhccccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHH-HHhhh-------hhcC
Confidence 9865533221 112233456789988788899999999999999999999999864332111 11110 0001
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 711 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
..+.. ........+.+++.+||+.||++||||.+|++.+.
T Consensus 224 ~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~ 263 (267)
T cd08229 224 DYPPL---PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAK 263 (267)
T ss_pred CCCCC---CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHh
Confidence 11111 11223445889999999999999999999887764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=315.20 Aligned_cols=251 Identities=21% Similarity=0.272 Sum_probs=194.9
Q ss_pred cCCCCcCccccCCceeEEEEEeC------CCcEEEEEEccccCCC-ChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT------DGTLVAIRSLKMSKKS-SPHMYTYHIELISKL-RHSNLVSALGHCLDFSLD 551 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~ 551 (769)
++|...+.||+|+||.||+|+.. ++..||||.++..... ..+.+.+|+++++++ +||||++++++|...+.
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~- 113 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP- 113 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc-
Confidence 46888999999999999999741 3568999998754322 235688999999999 79999999999876443
Q ss_pred CCCcceEEEEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecC
Q 004195 552 DPSISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINS 630 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~D 630 (769)
.++||||+++|+|.++++.. ...+++.++..++.|++.||+|||+. +|+||||||+||++++++.+|++|
T Consensus 114 ------~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~d 184 (302)
T cd05055 114 ------ILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICD 184 (302)
T ss_pred ------eEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECC
Confidence 79999999999999999743 23489999999999999999999998 999999999999999999999999
Q ss_pred CCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhH-HHHhhhhhccccc
Q 004195 631 YNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVV-LVKDLLQVNIGTD 704 (769)
Q Consensus 631 FGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~-~~~~~~~~~~~~~ 704 (769)
||+++....... ........|.+||......++.++|||||||++|||+| |++|+...... ..........
T Consensus 185 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~--- 261 (302)
T cd05055 185 FGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGY--- 261 (302)
T ss_pred CcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCC---
Confidence 999865432211 11112234678998888889999999999999999998 99988654321 1112111000
Q ss_pred cccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 705 EARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 705 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
.+. .+.....++.+++.+|++.+|++|||+.|+++.+..
T Consensus 262 -------~~~----~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~ 300 (302)
T cd05055 262 -------RMA----QPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGK 300 (302)
T ss_pred -------cCC----CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHh
Confidence 000 111122358899999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=311.18 Aligned_cols=257 Identities=20% Similarity=0.285 Sum_probs=193.7
Q ss_pred cCCCCcCccccCCceeEEEEEeCC-----------------CcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTD-----------------GTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSA 541 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~-----------------g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l 541 (769)
++|+..+.||+|+||.||+|+..+ +..||+|.+..... ...+.+.+|++++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~ 84 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL 84 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 468889999999999999998542 24589999875432 234578899999999999999999
Q ss_pred eeeeeccCCCCCCcceEEEEEeccCCCchhhhhcCCC----------CCCCHHHHHHHHHHHHHHhcccccCCCCCcccc
Q 004195 542 LGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPG----------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSN 611 (769)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~----------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHr 611 (769)
+++|.... ..++||||+++++|.+++.+.. ..+++..++.++.|++.||+|||+. +|+||
T Consensus 85 ~~~~~~~~-------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~ 154 (296)
T cd05051 85 LGVCTVDP-------PLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHR 154 (296)
T ss_pred EEEEecCC-------CcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Ccccc
Confidence 99997643 3799999999999999987432 2689999999999999999999998 99999
Q ss_pred CccccceeeCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh--CCCCC
Q 004195 612 NLKITDVLLDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV--GRPIT 685 (769)
Q Consensus 612 DlKp~NILld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt--G~~p~ 685 (769)
||||+||+++.++.+|++|||+++....... .....+..|++||......++.++|||||||++|||++ |..|+
T Consensus 155 dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~ 234 (296)
T cd05051 155 DLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPY 234 (296)
T ss_pred ccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCC
Confidence 9999999999999999999999865432211 11112235778998877889999999999999999998 66777
Q ss_pred CCchhHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 686 SENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
.................... . ... ...+...+.++.+++.+|++.||++|||+.|+++.+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~-~-~~~-----~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 235 EHLTDQQVIENAGHFFRDDG-R-QIY-----LPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred CCcChHHHHHHHHhcccccc-c-ccc-----CCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 64332221111111000000 0 000 0011122345899999999999999999999998774
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=313.82 Aligned_cols=253 Identities=22% Similarity=0.282 Sum_probs=197.2
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC---hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS---PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~---~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
..|+..+.||+|+||.||+|+.. +|+.||+|.+....... .+++.+|+++++.++||||++++++|.+...
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~----- 89 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHT----- 89 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCe-----
Confidence 45778899999999999999975 68999999986543322 2468899999999999999999999986443
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
.++||||++ |++.+++......+++..+..++.|++.||.|||+. +|+||||+|+||++++++.+||+|||++.
T Consensus 90 --~~lv~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~ 163 (307)
T cd06607 90 --AWLVMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSAS 163 (307)
T ss_pred --EEEEHHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcce
Confidence 799999997 577777764444799999999999999999999998 99999999999999999999999999986
Q ss_pred hhhccCCcceeecCCCcchhhhc---cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccC
Q 004195 636 LAEARGKGSAEVSSPAKKTSVLA---RTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVD 712 (769)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~pe~~~---~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 712 (769)
...... .......|++||... ...++.++|||||||++|||+||++|+............... ..
T Consensus 164 ~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~----------~~ 231 (307)
T cd06607 164 LVSPAN--SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----------DS 231 (307)
T ss_pred ecCCCC--CccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcC----------CC
Confidence 543221 122334567788653 356889999999999999999999998654322211111100 00
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 713 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
+.. ........+.+++.+||+.+|++||++.+++.|+|+....
T Consensus 232 ~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 274 (307)
T cd06607 232 PTL---SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRER 274 (307)
T ss_pred CCC---CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccC
Confidence 111 1123445689999999999999999999999999987543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=310.87 Aligned_cols=247 Identities=16% Similarity=0.204 Sum_probs=187.7
Q ss_pred ccccCCceeEEEEEeC-CCcEEEEEEccccCCC---ChhHHHHHHHHHhh---ccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 487 FMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS---SPHMYTYHIELISK---LRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 487 ~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~---~~~~~~~Ei~~l~~---l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
.||+|+||.||+++.. +++.||+|.+...... ....+.+|..+++. .+||||+.+++++...+ ..+
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-------~~~ 73 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPD-------KLC 73 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCC-------eEE
Confidence 4899999999999975 6899999998754321 12234455444433 47999999999887643 389
Q ss_pred EEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhc
Q 004195 560 LIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEA 639 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~ 639 (769)
+||||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+|++|||++.....
T Consensus 74 lv~e~~~~~~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~ 149 (279)
T cd05633 74 FILDLMNGGDLHYHLSQHG-VFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSK 149 (279)
T ss_pred EEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceeccc
Confidence 9999999999999987554 699999999999999999999998 999999999999999999999999999865433
Q ss_pred cCCcceeecCCCcchhhhc-cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccCC
Q 004195 640 RGKGSAEVSSPAKKTSVLA-RTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNE 718 (769)
Q Consensus 640 ~~~~~~~~~~~~~~pe~~~-~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 718 (769)
.......++..|++||... +..++.++|||||||++|||+||+.||................ ..++.+
T Consensus 150 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~--------~~~~~~--- 218 (279)
T cd05633 150 KKPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL--------TVNVEL--- 218 (279)
T ss_pred cCccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhh--------cCCcCC---
Confidence 3322333455677888775 3568999999999999999999999986532211111111100 011112
Q ss_pred CCHHHHHHHHHHHHHcCcCCCCCCC-----CHHHHHHHhHhhh
Q 004195 719 CSDESLKRMMELCLRCLSNEPKDRP-----SVEDTLWNLQFAT 756 (769)
Q Consensus 719 ~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~~~~ 756 (769)
++....++.+++.+|+..||++|| +++|+++|+||..
T Consensus 219 -~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~ 260 (279)
T cd05633 219 -PDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKG 260 (279)
T ss_pred -ccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccC
Confidence 222334588999999999999999 6999999999875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=312.32 Aligned_cols=253 Identities=17% Similarity=0.226 Sum_probs=193.6
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC------CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCC
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT------DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~ 550 (769)
..++|++.+.||+|+||.||+|..+ .+..||+|.+..... .....+.+|+.++++++||||+++++++.+...
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 3567888999999999999999753 245899999874432 123467889999999999999999999876443
Q ss_pred CCCCcceEEEEEeccCCCchhhhhcCC---------CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeC
Q 004195 551 DDPSISIIYLIFEYAPNETLRSFISGP---------GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD 621 (769)
Q Consensus 551 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~---------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld 621 (769)
.++||||+++|+|.+++.+. ....++..+.+++.|++.||+|||+. +|+||||||+||+++
T Consensus 84 -------~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~ 153 (288)
T cd05061 84 -------TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVA 153 (288)
T ss_pred -------cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEc
Confidence 79999999999999999631 12457788899999999999999998 999999999999999
Q ss_pred CCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhh
Q 004195 622 ENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDL 696 (769)
Q Consensus 622 ~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~ 696 (769)
+++.+|++|||+++....... ........|++||......++.++|||||||++|||++ |++|+...........
T Consensus 154 ~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~ 233 (288)
T cd05061 154 HDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF 233 (288)
T ss_pred CCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 999999999999865422111 11112234778888888889999999999999999999 7888865443322221
Q ss_pred hhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 697 LQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 697 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
+.. .. .+.....+ ...+.+++.+|++.||++|||+.|+++.+..
T Consensus 234 ~~~----~~------~~~~~~~~----~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~ 277 (288)
T cd05061 234 VMD----GG------YLDQPDNC----PERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 277 (288)
T ss_pred HHc----CC------CCCCCCCC----CHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 110 00 01111122 2458999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=307.04 Aligned_cols=250 Identities=21% Similarity=0.350 Sum_probs=195.8
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-----CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-----SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-----~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
+|...+.||+|++|.||+|... +++.||+|.+..... ...+.+.+|++++++++|+||+++++++.+..
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~----- 75 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREED----- 75 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCC-----
Confidence 3667789999999999999976 799999999875432 12356889999999999999999999987643
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
..++||||+++++|.+++.+.. .+++..+..++.|+++||+|||+. +|+|+||||+||+++.++.+||+|||.+
T Consensus 76 --~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~ 149 (258)
T cd06632 76 --NLYIFLELVPGGSLAKLLKKYG-SFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMA 149 (258)
T ss_pred --eEEEEEEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccc
Confidence 3899999999999999997654 689999999999999999999998 9999999999999999999999999998
Q ss_pred hhhhccC-CcceeecCCCcchhhhccCC-CCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccC
Q 004195 635 LLAEARG-KGSAEVSSPAKKTSVLARTE-QDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVD 712 (769)
Q Consensus 635 ~~~~~~~-~~~~~~~~~~~~pe~~~~~~-~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 712 (769)
....... .........|++||...... ++.++|||||||++|||++|++||......... .... .... -
T Consensus 150 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~--~~~~--~~~~-----~ 220 (258)
T cd06632 150 KQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAV--FKIG--RSKE-----L 220 (258)
T ss_pred eeccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHH--HHHH--hccc-----C
Confidence 6543322 11222334467788776655 899999999999999999999998754321111 1100 0000 0
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 713 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
+.+ ++.....+.+++.+||+.+|++||++++++.|+|+
T Consensus 221 ~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 221 PPI----PDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred CCc----CCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 111 12223448889999999999999999999999874
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-36 Score=315.95 Aligned_cols=264 Identities=20% Similarity=0.333 Sum_probs=196.7
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
++|+..+.||+|+||.||+|..+ +++.||+|++...... ..+.+.+|++++++++||||+++++++.+..
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------- 73 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKK------- 73 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCC-------
Confidence 46788899999999999999976 5899999998754322 2456889999999999999999999987533
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++||||+++++|.++..... .++|.++..++.|+++||+|||+. +++||||||+||++++++.+|++|||++..
T Consensus 74 ~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~ 149 (286)
T cd07846 74 RLYLVFEFVDHTVLDDLEKYPN-GLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFART 149 (286)
T ss_pred eEEEEEecCCccHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeee
Confidence 4899999999999988876543 589999999999999999999998 999999999999999999999999999865
Q ss_pred hhccCCc--ceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchh-HHHHhhhhhcccccccccc---
Q 004195 637 AEARGKG--SAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVV-VLVKDLLQVNIGTDEARKS--- 709 (769)
Q Consensus 637 ~~~~~~~--~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~--- 709 (769)
....... .......|.+||...+ ..++.++|||||||++|||++|++|+..... +..................
T Consensus 150 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (286)
T cd07846 150 LAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQ 229 (286)
T ss_pred ccCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhc
Confidence 4332211 1122344667887654 3478899999999999999999998865432 1111111100000000000
Q ss_pred -------ccCccccC-----CCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 710 -------IVDPAVMN-----ECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 710 -------~~d~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
...+.... ...+.....+.+++.+||+.+|++||++.++++|.||
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 230 KNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred cchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 00011000 0011234558999999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=305.10 Aligned_cols=248 Identities=17% Similarity=0.269 Sum_probs=197.7
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC--CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK--KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
+|+..+.||+|+||.||.++.. +++.+|+|.+.... ....+++.+|++++++++|+||+++++++.+.. .
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-------~ 73 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDN-------T 73 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCC-------e
Confidence 4778899999999999999854 68999999987543 233457889999999999999999999997643 3
Q ss_pred EEEEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 558 IYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
.++||||+++|+|.+++.+. ...+++.++..++.|+++||+|||+. +++||||||+||++++++.+||+|||.+..
T Consensus 74 ~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~ 150 (256)
T cd08221 74 LLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKI 150 (256)
T ss_pred EEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEE
Confidence 89999999999999999754 44689999999999999999999998 999999999999999999999999999865
Q ss_pred hhccCC--cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccccccccccccCc
Q 004195 637 AEARGK--GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 637 ~~~~~~--~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~ 713 (769)
...... ........|.+||...+..++.++||||||+++|||++|+.|+....... ....... .. .+
T Consensus 151 ~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~------~~----~~ 220 (256)
T cd08221 151 LGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQG------NY----TP 220 (256)
T ss_pred cccccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC------CC----CC
Confidence 533221 12223456677888877788999999999999999999999987543222 1111110 00 00
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
.+.....++.+++.+||..+|++||++.|++++++
T Consensus 221 -----~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~ 255 (256)
T cd08221 221 -----VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPL 255 (256)
T ss_pred -----CccccCHHHHHHHHHHcccCcccCCCHHHHhhCcC
Confidence 11222344889999999999999999999999886
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=314.83 Aligned_cols=254 Identities=20% Similarity=0.330 Sum_probs=196.4
Q ss_pred cCCCCcCccccCCceeEEEEEeC--------CCcEEEEEEccccCC-CChhHHHHHHHHHhhc-cCCceeeEeeeeeccC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT--------DGTLVAIRSLKMSKK-SSPHMYTYHIELISKL-RHSNLVSALGHCLDFS 549 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~--------~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~ 549 (769)
++|...+.||+|+||.||+|+.. .+..||+|.++.... .....+.+|+++++++ +||||++++++|.+..
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 45778899999999999999742 245799999875422 2234688899999999 6999999999987543
Q ss_pred CCCCCcceEEEEEeccCCCchhhhhcCC---------------CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCcc
Q 004195 550 LDDPSISIIYLIFEYAPNETLRSFISGP---------------GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLK 614 (769)
Q Consensus 550 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlK 614 (769)
..++||||+++|+|.+++... ...++|.++.+++.|++.||+|||+. +++|||||
T Consensus 92 -------~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlk 161 (314)
T cd05099 92 -------PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLA 161 (314)
T ss_pred -------ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---Ceeecccc
Confidence 379999999999999998632 13589999999999999999999998 99999999
Q ss_pred ccceeeCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCch
Q 004195 615 ITDVLLDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENV 689 (769)
Q Consensus 615 p~NILld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~ 689 (769)
|+||++++++.+|++|||.++....... ........|++||......++.++|||||||++|||++ |+.||....
T Consensus 162 p~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~ 241 (314)
T cd05099 162 ARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIP 241 (314)
T ss_pred ceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCC
Confidence 9999999999999999999965432211 11111234788998888889999999999999999999 888886554
Q ss_pred hHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 690 VVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.......+.... .......++ .++.+++.+||+.+|++|||+.|+++.++....
T Consensus 242 ~~~~~~~~~~~~----------~~~~~~~~~----~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 295 (314)
T cd05099 242 VEELFKLLREGH----------RMDKPSNCT----HELYMLMRECWHAVPTQRPTFKQLVEALDKVLA 295 (314)
T ss_pred HHHHHHHHHcCC----------CCCCCCCCC----HHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 333322221100 011112223 348899999999999999999999999986643
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=307.23 Aligned_cols=252 Identities=17% Similarity=0.268 Sum_probs=195.9
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--C---hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--S---PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~---~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
++|+..+.||+|+||.||+|+.. +|..||||.+...... . .+.+.+|++++++++||||+++++++.+..
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---- 77 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPM---- 77 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCC----
Confidence 46888999999999999999975 6899999998643211 1 246788999999999999999999876532
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
....++||||+++++|.+++.+.. .+++....+++.|++.||+|||+. +++|+||||+||+++.++.+||+|||+
T Consensus 78 -~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~ 152 (265)
T cd06652 78 -ERTLSIFMEHMPGGSIKDQLKSYG-ALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGA 152 (265)
T ss_pred -CceEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCcc
Confidence 234789999999999999987543 578899999999999999999998 999999999999999999999999999
Q ss_pred chhhhcc-----CCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccc
Q 004195 634 PLLAEAR-----GKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARK 708 (769)
Q Consensus 634 a~~~~~~-----~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (769)
++..... ..........|.+||......++.++|||||||++|||++|++||....... ....... ..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~--~~~~~~~-~~---- 225 (265)
T cd06652 153 SKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMA--AIFKIAT-QP---- 225 (265)
T ss_pred ccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHH--HHHHHhc-CC----
Confidence 8654321 1111223346778998888888999999999999999999999986542211 1111100 00
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
.. ...+......+.+++.+|+. +|++||+++|+++|+|+
T Consensus 226 --~~----~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~ 264 (265)
T cd06652 226 --TN----PVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFV 264 (265)
T ss_pred --CC----CCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCccc
Confidence 01 12233444568889999995 89999999999999985
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-35 Score=305.37 Aligned_cols=248 Identities=21% Similarity=0.307 Sum_probs=183.8
Q ss_pred CccccCCceeEEEEEeCC---CcEEEEEEccccCCC-ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEE
Q 004195 486 SFMCDASHGQIYKGKLTD---GTLVAIRSLKMSKKS-SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLI 561 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~~---g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV 561 (769)
+.||+|+||.||+|+..+ +..+|+|.++..... ....+.+|+.++++++||||+++++++.+... .++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-------~~lv 73 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTP-------YLLV 73 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCC-------cEEE
Confidence 368999999999998643 467999998755322 23468889999999999999999999876433 7999
Q ss_pred EeccCCCchhhhhcCC----CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 562 FEYAPNETLRSFISGP----GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 562 ~Ey~~~gsL~~~l~~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
|||+++|+|.+++... ....++..+..++.|+++|++|||+. +++||||||+||+++.++++|++|||+++..
T Consensus 74 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~ 150 (269)
T cd05087 74 MEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNK 150 (269)
T ss_pred EECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccc
Confidence 9999999999998632 23467888889999999999999998 9999999999999999999999999998643
Q ss_pred hccCC----cceeecCCCcchhhhccC-------CCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhcccccc
Q 004195 638 EARGK----GSAEVSSPAKKTSVLART-------EQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDE 705 (769)
Q Consensus 638 ~~~~~----~~~~~~~~~~~pe~~~~~-------~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 705 (769)
..... ........|++||..... .++.++|||||||++|||++ |+.||............. ..
T Consensus 151 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~-----~~ 225 (269)
T cd05087 151 YKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTV-----RE 225 (269)
T ss_pred cCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHh-----hc
Confidence 22211 111123346778876432 35889999999999999996 999986543222211110 01
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 706 ARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 706 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
......+|.+....++ .+.+++.+|| .+|++|||++||++.+.
T Consensus 226 ~~~~~~~~~~~~~~~~----~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 226 QQLKLPKPRLKLPLSD----RWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred ccCCCCCCccCCCCCh----HHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 1112222332222233 3778899999 68999999999998764
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-35 Score=307.24 Aligned_cols=250 Identities=18% Similarity=0.245 Sum_probs=195.4
Q ss_pred cCCCCcCccccCCceeEEEEEeCC------CcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTD------GTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD 552 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~------g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~ 552 (769)
++|...+.||+|+||.||+|...+ +..||+|.+..... .....+.+|+.+++.++||||+++++++.+...
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~-- 83 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQP-- 83 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCC--
Confidence 467788999999999999998642 46899999864432 223568899999999999999999999876433
Q ss_pred CCcceEEEEEeccCCCchhhhhcCC---------CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC
Q 004195 553 PSISIIYLIFEYAPNETLRSFISGP---------GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN 623 (769)
Q Consensus 553 ~~~~~~~lV~Ey~~~gsL~~~l~~~---------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~ 623 (769)
.++||||+++|+|.+++... ...++|..+..++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 84 -----~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~ 155 (277)
T cd05032 84 -----TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAED 155 (277)
T ss_pred -----cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCC
Confidence 79999999999999998632 12478999999999999999999998 99999999999999999
Q ss_pred ceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhh
Q 004195 624 FHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQ 698 (769)
Q Consensus 624 ~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~ 698 (769)
+.+||+|||+++....... .....+..|.+||......++.++|||||||++||++| |++|+.............
T Consensus 156 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~ 235 (277)
T cd05032 156 LTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVI 235 (277)
T ss_pred CCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHh
Confidence 9999999999865432211 11122345778998888889999999999999999998 899986544333322221
Q ss_pred hccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 699 VNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 699 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
.. . .+.....+ ...+.+++.+||+.+|++|||+.+++..+.
T Consensus 236 ~~-----~-----~~~~~~~~----~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 236 DG-----G-----HLDLPENC----PDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred cC-----C-----CCCCCCCC----CHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 10 0 01111222 345889999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-35 Score=311.94 Aligned_cols=253 Identities=19% Similarity=0.307 Sum_probs=197.3
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCc----EEEEEEccccCCCC-hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGT----LVAIRSLKMSKKSS-PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~----~vAvK~~~~~~~~~-~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
++|+..+.||+|+||.||+|... +|. .||+|.+....... ..++.+|+.++++++||||++++|+|....
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~---- 82 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPT---- 82 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCC----
Confidence 45777899999999999999864 454 57899887543222 346889999999999999999999987522
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
.++++||+++|+|.+++......+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 83 ----~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~ 155 (303)
T cd05110 83 ----IQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGL 155 (303)
T ss_pred ----ceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEccccc
Confidence 5799999999999999986655789999999999999999999998 999999999999999999999999999
Q ss_pred chhhhccCCc----ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccc
Q 004195 634 PLLAEARGKG----SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARK 708 (769)
Q Consensus 634 a~~~~~~~~~----~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (769)
++........ .......|++||...+..++.++|||||||++|||++ |+.|+..........++.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~------ 229 (303)
T cd05110 156 ARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGER------ 229 (303)
T ss_pred cccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCC------
Confidence 9765322211 1112235778898888889999999999999999998 8888865443333333321100
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
+.....++ ..+.+++.+||..+|++||+++++++.+....+
T Consensus 230 ----~~~~~~~~----~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~ 270 (303)
T cd05110 230 ----LPQPPICT----IDVYMVMVKCWMIDADSRPKFKELAAEFSRMAR 270 (303)
T ss_pred ----CCCCCCCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 00111222 348899999999999999999999999886543
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-35 Score=304.18 Aligned_cols=248 Identities=21% Similarity=0.336 Sum_probs=196.2
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
++|...+.||+|+||.||+|...++..+|+|.+.... ...+.+.+|++++++++|+||+++++++.+ . ..+
T Consensus 6 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~-------~~~ 76 (260)
T cd05073 6 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-E-------PIY 76 (260)
T ss_pred cceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-C-------CeE
Confidence 4678889999999999999998778889999887432 234678999999999999999999999865 2 279
Q ss_pred EEEeccCCCchhhhhcC-CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 560 LIFEYAPNETLRSFISG-PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
++|||+++|+|.+++.+ ....+++.++..++.|++.||+|||+. +++||||||+||+++.++.+|++|||.+....
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~ 153 (260)
T cd05073 77 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIE 153 (260)
T ss_pred EEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeecc
Confidence 99999999999999974 344689999999999999999999998 99999999999999999999999999986543
Q ss_pred ccCCcc---eeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCcc
Q 004195 639 ARGKGS---AEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 639 ~~~~~~---~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
...... ......|.+||......++.++|||||||++||++| |+.||...........+.... ...
T Consensus 154 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~----------~~~ 223 (260)
T cd05073 154 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY----------RMP 223 (260)
T ss_pred CCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCC----------CCC
Confidence 222111 111234678898888889999999999999999999 898887544332222211110 011
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
..... +.++.+++.+|++.+|++||++.++++.+.
T Consensus 224 ~~~~~----~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~ 258 (260)
T cd05073 224 RPENC----PEELYNIMMRCWKNRPEERPTFEYIQSVLD 258 (260)
T ss_pred CcccC----CHHHHHHHHHHcccCcccCcCHHHHHHHHh
Confidence 11222 334889999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=305.62 Aligned_cols=237 Identities=18% Similarity=0.281 Sum_probs=184.8
Q ss_pred CccccCCceeEEEEEeCC-C----------cEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 486 SFMCDASHGQIYKGKLTD-G----------TLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~~-g----------~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
+.||+|+||.||+|...+ + ..||+|.+...... ...+.+|+.++++++||||+++++++.. ..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~---- 74 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DE---- 74 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CC----
Confidence 468999999999999764 3 25788887654333 6789999999999999999999999876 22
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc-------eee
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF-------HVK 627 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~-------~~k 627 (769)
.++||||+++|+|.+++......+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+|
T Consensus 75 ---~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~k 148 (259)
T cd05037 75 ---NIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIK 148 (259)
T ss_pred ---cEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEE
Confidence 6899999999999999986554789999999999999999999998 999999999999999888 799
Q ss_pred ecCCCCchhhhccCCcceeecCCCcchhhhccC--CCCCCCCeeehhHHHHHHHhC-CCCCCCchhHHHHhhhhhccccc
Q 004195 628 INSYNLPLLAEARGKGSAEVSSPAKKTSVLART--EQDDKSDVYDIGIILIEIIVG-RPITSENVVVLVKDLLQVNIGTD 704 (769)
Q Consensus 628 l~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~~--~~~~ksDVwS~Gvil~elltG-~~p~~~~~~~~~~~~~~~~~~~~ 704 (769)
++|||++...... .......+|.+||.+... .++.++|||||||++|||++| ..|+............. ..
T Consensus 149 l~Dfg~a~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~----~~ 222 (259)
T cd05037 149 LSDPGIPITVLSR--EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQ----DQ 222 (259)
T ss_pred eCCCCcccccccc--cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHh----cC
Confidence 9999998654331 122233567888887665 789999999999999999994 66665432111111110 00
Q ss_pred cccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHh
Q 004195 705 EARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNL 752 (769)
Q Consensus 705 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 752 (769)
.....+ . ...+.+++.+||..+|++|||+.|+++.+
T Consensus 223 ---~~~~~~-----~----~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 223 ---HRLPMP-----D----CAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred ---CCCCCC-----C----chHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 000000 0 14588999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-37 Score=321.60 Aligned_cols=253 Identities=18% Similarity=0.272 Sum_probs=204.8
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
-|++...||.|+||.||||..+ .+-..|.|++.......-++|.-||+||+...||+||++++.|+..+ .++
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~en-------kLw 105 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFEN-------KLW 105 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccC-------ceE
Confidence 3566788999999999999976 46677889887666666678999999999999999999999776533 389
Q ss_pred EEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch-hhh
Q 004195 560 LIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL-LAE 638 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~-~~~ 638 (769)
++.|||+||-...++-.-+..|++.++..++.|++.||.|||+. .|||||||..|||+.-+|.++++|||.+- ...
T Consensus 106 iliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~ 182 (1187)
T KOG0579|consen 106 ILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS 182 (1187)
T ss_pred EEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchh
Confidence 99999999999998876667899999999999999999999999 99999999999999999999999999873 222
Q ss_pred cc-CCcceeecCCCcchhhhc-----cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccC
Q 004195 639 AR-GKGSAEVSSPAKKTSVLA-----RTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVD 712 (769)
Q Consensus 639 ~~-~~~~~~~~~~~~~pe~~~-----~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 712 (769)
.. ......++++|++||+.. ..+|+.++||||||++|.||..+.||..+-....+.-.+.. . -.
T Consensus 183 t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaK--S--------eP 252 (1187)
T KOG0579|consen 183 TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAK--S--------EP 252 (1187)
T ss_pred HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhh--c--------CC
Confidence 11 223445667778888754 45799999999999999999999999876443332221111 0 11
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 713 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
|.+ ..|..+...+.+++.+|+.+||..||++.++++|+|+.
T Consensus 253 PTL--lqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~ 293 (1187)
T KOG0579|consen 253 PTL--LQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQ 293 (1187)
T ss_pred Ccc--cCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccc
Confidence 222 22455677799999999999999999999999999985
|
|
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-36 Score=310.55 Aligned_cols=239 Identities=18% Similarity=0.245 Sum_probs=184.3
Q ss_pred CccccCCceeEEEEEeC-CC-------cEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 486 SFMCDASHGQIYKGKLT-DG-------TLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~-~g-------~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
+.||+|+||.||+|... .+ ..||+|.+........+.+.+|+.+++.++||||+++++++.....
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~------- 73 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDE------- 73 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCC-------
Confidence 46899999999999864 22 3488888865444445678899999999999999999999986433
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCce--------eeec
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH--------VKIN 629 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~--------~kl~ 629 (769)
.++||||+++|+|.++++..+..+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +|++
T Consensus 74 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~ 150 (258)
T cd05078 74 SIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLS 150 (258)
T ss_pred cEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEec
Confidence 7999999999999999986655789999999999999999999998 9999999999999987765 5999
Q ss_pred CCCCchhhhccCCcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCC-CCCCCchhHHHHhhhhhcccccccc
Q 004195 630 SYNLPLLAEARGKGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGR-PITSENVVVLVKDLLQVNIGTDEAR 707 (769)
Q Consensus 630 DFGla~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~-~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (769)
|||.+...... .......+|++||.+.. ..++.++|||||||++|||++|. +|+..............
T Consensus 151 d~g~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~~-------- 220 (258)
T cd05078 151 DPGISITVLPK--EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYED-------- 220 (258)
T ss_pred ccccccccCCc--hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHHc--------
Confidence 99988544322 11223456788988765 35799999999999999999995 56544322211111100
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHh
Q 004195 708 KSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNL 752 (769)
Q Consensus 708 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 752 (769)
.+.+... ...++.+++.+||+.||++|||++++++.+
T Consensus 221 ----~~~~~~~----~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 221 ----RHQLPAP----KWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred ----cccCCCC----CcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 0111111 123488999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-35 Score=304.36 Aligned_cols=247 Identities=17% Similarity=0.228 Sum_probs=195.0
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC-CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK-KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
+|+..+.||+|+||.||++... +++.+|+|.++... ....+.+.+|+.++++++|+||+++++++.+.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-------~~ 73 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADG-------HL 73 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECC-------EE
Confidence 4777899999999999999965 68999999986432 233467888999999999999999999987643 48
Q ss_pred EEEEeccCCCchhhhhcC-CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 559 YLIFEYAPNETLRSFISG-PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
++||||+++|+|.+++.. .+..+++.....++.|+++||+|||+. +|+|+||||+||++++++.++++|||.+...
T Consensus 74 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~ 150 (255)
T cd08219 74 YIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLL 150 (255)
T ss_pred EEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceee
Confidence 999999999999998863 334688999999999999999999998 9999999999999999999999999998654
Q ss_pred hccCC--cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccc
Q 004195 638 EARGK--GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAV 715 (769)
Q Consensus 638 ~~~~~--~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 715 (769)
..... ........|++||...+..++.++||||||+++|+|++|++||...........+.. .. . +.+
T Consensus 151 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~--~~-------~-~~~ 220 (255)
T cd08219 151 TSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQ--GS-------Y-KPL 220 (255)
T ss_pred cccccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhc--CC-------C-CCC
Confidence 33221 112233457789988888899999999999999999999999976543222111110 00 0 011
Q ss_pred cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHH
Q 004195 716 MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWN 751 (769)
Q Consensus 716 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 751 (769)
+......+.+++.+||+.||++||++.|++..
T Consensus 221 ----~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 221 ----PSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ----CcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 11223348899999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-35 Score=303.68 Aligned_cols=256 Identities=17% Similarity=0.256 Sum_probs=203.7
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|+..+.||+|++|.||+|+.. +++.||||++..... ...+.+.+|++.+.+++|+||+++++++.... .
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-------~ 73 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEG-------E 73 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCC-------e
Confidence 36888899999999999999976 599999999976543 33567999999999999999999999987643 4
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhccccc-CCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHT-GIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
.++||||+++++|.+++... ..+++..+..++.|+++|++|||+ . +++||||+|+||+++.++.++++|||.+..
T Consensus 74 ~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~ 149 (264)
T cd06623 74 ISIVLEYMDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKV 149 (264)
T ss_pred EEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCcccee
Confidence 89999999999999999855 368999999999999999999999 8 999999999999999999999999999866
Q ss_pred hhccCCc--ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCcc
Q 004195 637 AEARGKG--SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 637 ~~~~~~~--~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
....... .......|.+||......++.++||||||+++|||+||++|+................ ....+.
T Consensus 150 ~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~-------~~~~~~ 222 (264)
T cd06623 150 LENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAIC-------DGPPPS 222 (264)
T ss_pred cccCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHh-------cCCCCC
Confidence 5433222 2234456778998888888999999999999999999999986543101111111100 001111
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.... ..+..+.+++.+|+..+|++||++.|+++|+|+..
T Consensus 223 ~~~~---~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~ 261 (264)
T cd06623 223 LPAE---EFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKK 261 (264)
T ss_pred CCcc---cCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHh
Confidence 1111 03345889999999999999999999999999853
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-36 Score=312.94 Aligned_cols=250 Identities=17% Similarity=0.279 Sum_probs=202.3
Q ss_pred CCcCccccCCceeEEEEEeCC---C--cEEEEEEccccC-CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 483 DSSSFMCDASHGQIYKGKLTD---G--TLVAIRSLKMSK-KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 483 ~~~~~iG~G~~g~Vy~~~~~~---g--~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
...++||.|-||.||+|.+.+ | -.||||.-+... ..+.+.|..|..+|+.++|||||+++|+|.+.
T Consensus 392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-------- 463 (974)
T KOG4257|consen 392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-------- 463 (974)
T ss_pred cHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc--------
Confidence 346889999999999999642 3 368999888643 34567899999999999999999999999852
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
-.|+|||.++.|.|.++++.+...|+......++.||+.||+|||+. ++|||||..+|||+...-.+|++|||+++.
T Consensus 464 P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~ 540 (974)
T KOG4257|consen 464 PMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSRY 540 (974)
T ss_pred ceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhhh
Confidence 27999999999999999998878899999999999999999999999 999999999999999999999999999998
Q ss_pred hhccCCcc---eeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccC
Q 004195 637 AEARGKGS---AEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVD 712 (769)
Q Consensus 637 ~~~~~~~~---~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 712 (769)
+++...-. ......|++||.+.-.++|.++|||-|||.+||++. |.+||.+-....+-.. .+.--.
T Consensus 541 ~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~----------iEnGeR 610 (974)
T KOG4257|consen 541 LEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGH----------IENGER 610 (974)
T ss_pred ccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEE----------ecCCCC
Confidence 86654321 122345788999888899999999999999999987 9999875432211110 011111
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 713 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
. .+|+.++..+..++.+||+.||.+||.+.|+...+..+-+
T Consensus 611 l----P~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 611 L----PCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred C----CCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 2 2333444458899999999999999999999988876644
|
|
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=312.40 Aligned_cols=263 Identities=19% Similarity=0.302 Sum_probs=194.0
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC--CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK--SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
+|+..+.||+|++|.||+|+.. +|+.||||+++.... ...+.+.+|++++++++||||+++++++.+.+ .
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-------~ 73 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTEN-------K 73 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCC-------c
Confidence 4788899999999999999975 689999999875432 22357889999999999999999999987543 3
Q ss_pred EEEEEeccCCCchhhhhcC-CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 558 IYLIFEYAPNETLRSFISG-PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
.++||||++ ++|.+++.. ....+++..+..++.|+++||+|||+. +++||||||+||++++++.+|++|||++..
T Consensus 74 ~~~v~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~ 149 (284)
T cd07860 74 LYLVFEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARA 149 (284)
T ss_pred EEEEeeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhh
Confidence 899999996 689888863 334689999999999999999999998 999999999999999999999999999865
Q ss_pred hhccCC--cceeecCCCcchhhhccCC-CCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhccccccccc----
Q 004195 637 AEARGK--GSAEVSSPAKKTSVLARTE-QDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIGTDEARK---- 708 (769)
Q Consensus 637 ~~~~~~--~~~~~~~~~~~pe~~~~~~-~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~---- 708 (769)
...... ........|.+||...+.. ++.++|||||||++|||+||+.||...... .................
T Consensus 150 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07860 150 FGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 229 (284)
T ss_pred cccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhh
Confidence 432211 1122334567788765544 588999999999999999999998654321 11111111000000000
Q ss_pred ccc-----CccccC----CCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 709 SIV-----DPAVMN----ECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 709 ~~~-----d~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
.+. -+.... ...+.....+.+++.+|++.||++|||++|+++|+||
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 230 SLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred HHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 000 000000 0011122447899999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=311.70 Aligned_cols=266 Identities=18% Similarity=0.259 Sum_probs=198.0
Q ss_pred CCCCcCccccCCceeEEEEEeC-----CCcEEEEEEccccCCC-ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-----DGTLVAIRSLKMSKKS-SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-----~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
.|...+.||+|+||.||+|++. ++..||||.+...... ..+.+.+|++++++++||||+++++++...+
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~----- 79 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPG----- 79 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCC-----
Confidence 4666789999999999999854 3689999999865433 3567999999999999999999999886532
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
....++||||+++++|.+++......++|..+..++.|++.||+|||+. +++||||||+||+++.++.+|++|||.+
T Consensus 80 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~ 156 (284)
T cd05038 80 GRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLA 156 (284)
T ss_pred CCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccccc
Confidence 2347999999999999999986555699999999999999999999998 9999999999999999999999999999
Q ss_pred hhhhccCCc-----ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhc-cccccccc
Q 004195 635 LLAEARGKG-----SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVN-IGTDEARK 708 (769)
Q Consensus 635 ~~~~~~~~~-----~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~-~~~~~~~~ 708 (769)
......... .......|++||......++.++||||||+++|||+||+.|+............... ........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05038 157 KVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLL 236 (284)
T ss_pred cccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHH
Confidence 765422111 111223467788887788999999999999999999999887543221110000000 00000000
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
+.+........+.....++.+++.+||+.+|++|||+.||++.+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~ 282 (284)
T cd05038 237 ELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDR 282 (284)
T ss_pred HHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhh
Confidence 0011111111112223458899999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-35 Score=308.66 Aligned_cols=255 Identities=18% Similarity=0.279 Sum_probs=193.1
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-CChhHHHHHHHH-HhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-SSPHMYTYHIEL-ISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~Ei~~-l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
++|+..+.||+|+||.||+|+.. +|+.||+|+++.... ....++..|+.+ ++..+||||+++++++.....
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~------ 74 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGD------ 74 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCc------
Confidence 46888999999999999999976 699999999975432 223456667765 566689999999999976433
Q ss_pred eEEEEEeccCCCchhhhhcC---CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 557 IIYLIFEYAPNETLRSFISG---PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
.++||||++ |+|.+++.. ....+++..+..++.|++.||+|||++ .+++||||||+||+++.++.+||+|||+
T Consensus 75 -~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--~~i~h~dlkp~nil~~~~~~~kl~dfg~ 150 (283)
T cd06617 75 -VWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSK--LSVIHRDVKPSNVLINRNGQVKLCDFGI 150 (283)
T ss_pred -EEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeeccc
Confidence 899999997 688777752 334689999999999999999999974 2799999999999999999999999999
Q ss_pred chhhhccCC-cceeecCCCcchhhhcc----CCCCCCCCeeehhHHHHHHHhCCCCCCCchh--HHHHhhhhhccccccc
Q 004195 634 PLLAEARGK-GSAEVSSPAKKTSVLAR----TEQDDKSDVYDIGIILIEIIVGRPITSENVV--VLVKDLLQVNIGTDEA 706 (769)
Q Consensus 634 a~~~~~~~~-~~~~~~~~~~~pe~~~~----~~~~~ksDVwS~Gvil~elltG~~p~~~~~~--~~~~~~~~~~~~~~~~ 706 (769)
+........ .....+..|.+||.+.+ ..++.++|||||||++|||++|+.|+..... +.......
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-------- 222 (283)
T cd06617 151 SGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVE-------- 222 (283)
T ss_pred ccccccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHh--------
Confidence 865432221 11223445677887643 4568999999999999999999999864221 11111111
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 707 RKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 707 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
...+.+.. ...+.++.+++.+||..+|++||+++++++|+|+....
T Consensus 223 ---~~~~~~~~---~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 268 (283)
T cd06617 223 ---EPSPQLPA---EKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL 268 (283)
T ss_pred ---cCCCCCCc---cccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcc
Confidence 00111111 11234488999999999999999999999999998764
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-35 Score=307.05 Aligned_cols=253 Identities=21% Similarity=0.298 Sum_probs=199.5
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
-|+..+.||+|+||.||+|... +++.||+|.+..... .....+.+|++++++++||||+++++++.+.. ..
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-------~~ 77 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT-------KL 77 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCC-------eE
Confidence 3667789999999999999865 689999999864432 22356889999999999999999999997643 38
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
++||||+++++|.+++... .+++..+..++.|++.|++|||+. +++|+||||+||+++.++.++++|||++....
T Consensus 78 ~lv~e~~~~~~l~~~i~~~--~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06641 78 WIIMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 152 (277)
T ss_pred EEEEEeCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecc
Confidence 9999999999999998754 589999999999999999999998 99999999999999999999999999986543
Q ss_pred ccCC--cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCcccc
Q 004195 639 ARGK--GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM 716 (769)
Q Consensus 639 ~~~~--~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 716 (769)
.... ........|.+||......++.++|||||||++|||++|+.|+...........+.. . ..+.+.
T Consensus 153 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~--~--------~~~~~~ 222 (277)
T cd06641 153 DTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPK--N--------NPPTLE 222 (277)
T ss_pred cchhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhc--C--------CCCCCC
Confidence 3211 112234456778888777889999999999999999999999865432221111110 0 011111
Q ss_pred CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 717 NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 717 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
..+ ...+.+++.+||+.+|++||++.++++|+|+.....
T Consensus 223 ~~~----~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~~~ 261 (277)
T cd06641 223 GNY----SKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRFAK 261 (277)
T ss_pred ccc----CHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhhhh
Confidence 222 344889999999999999999999999999976533
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=311.61 Aligned_cols=255 Identities=17% Similarity=0.280 Sum_probs=201.7
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
++|...+.||+|+||.||+|... ++..||+|.+........+.+.+|+.++++++||||++++++|.... ..
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~-------~~ 91 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGD-------EL 91 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCC-------cE
Confidence 57888899999999999999864 68899999987554455567899999999999999999999987643 38
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
++|+||+++++|.+++.+. .+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++....
T Consensus 92 ~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~ 166 (293)
T cd06647 92 WVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 166 (293)
T ss_pred EEEEecCCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceeccc
Confidence 9999999999999999754 478999999999999999999999 99999999999999999999999999875443
Q ss_pred ccCC--cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCcccc
Q 004195 639 ARGK--GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM 716 (769)
Q Consensus 639 ~~~~--~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 716 (769)
.... ........|.+||......++.++|||||||++||+++|++||.......... ... ... .+..
T Consensus 167 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~--~~~--~~~------~~~~- 235 (293)
T cd06647 167 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY--LIA--TNG------TPEL- 235 (293)
T ss_pred ccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhee--ehh--cCC------CCCC-
Confidence 2221 11123345778888877888999999999999999999999997543211100 000 000 0000
Q ss_pred CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 717 NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 717 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
..+......+.+++.+||+.+|++||++.+++.|.||....
T Consensus 236 -~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~ 276 (293)
T cd06647 236 -QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAK 276 (293)
T ss_pred -CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCc
Confidence 11122334588999999999999999999999999997543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=342.76 Aligned_cols=263 Identities=16% Similarity=0.200 Sum_probs=199.5
Q ss_pred HHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 477 EATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 477 ~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
...++|.+.+.||+|+||+||+|+.. ++..||+|.+...... ....+.+|+.++++++|||||+++++|.+..
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~---- 85 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKA---- 85 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecC----
Confidence 34567999999999999999999976 6889999998754322 2356889999999999999999999886532
Q ss_pred CcceEEEEEeccCCCchhhhhcC---CCCCCCHHHHHHHHHHHHHHhcccccCCC----CCccccCccccceeeCC----
Q 004195 554 SISIIYLIFEYAPNETLRSFISG---PGYKLTWVQRIAAAIAIVKGVQFLHTGIV----PGVFSNNLKITDVLLDE---- 622 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~----~~ivHrDlKp~NILld~---- 622 (769)
...+|+||||+++|+|.+++.. ....+++..++.|+.||+.||+|||+... .+||||||||+|||++.
T Consensus 86 -~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~ 164 (1021)
T PTZ00266 86 -NQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRH 164 (1021)
T ss_pred -CCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccc
Confidence 2348999999999999999863 22369999999999999999999998521 25999999999999964
Q ss_pred -------------CceeeecCCCCchhhhccCC-cceeecCCCcchhhhcc--CCCCCCCCeeehhHHHHHHHhCCCCCC
Q 004195 623 -------------NFHVKINSYNLPLLAEARGK-GSAEVSSPAKKTSVLAR--TEQDDKSDVYDIGIILIEIIVGRPITS 686 (769)
Q Consensus 623 -------------~~~~kl~DFGla~~~~~~~~-~~~~~~~~~~~pe~~~~--~~~~~ksDVwS~Gvil~elltG~~p~~ 686 (769)
...+||+|||++........ ....++..|++||.+.. ..++.++||||||||+|||+||+.||.
T Consensus 165 lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~ 244 (1021)
T PTZ00266 165 IGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFH 244 (1021)
T ss_pred cccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCC
Confidence 23489999999976533222 22234556788998753 458999999999999999999999996
Q ss_pred CchhHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 687 ENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
..... ..++.. +... .+.. ....+ ..+.+|+.+||+.+|.+||++.|++.+.|+....
T Consensus 245 ~~~~~--~qli~~-lk~~------p~lp-i~~~S----~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i~ 302 (1021)
T PTZ00266 245 KANNF--SQLISE-LKRG------PDLP-IKGKS----KELNILIKNLLNLSAKERPSALQCLGYQIIKNVG 302 (1021)
T ss_pred cCCcH--HHHHHH-HhcC------CCCC-cCCCC----HHHHHHHHHHhcCChhHCcCHHHHhccHHHhhcC
Confidence 53321 111111 0000 0000 01122 3488999999999999999999999999986443
|
|
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-35 Score=313.85 Aligned_cols=270 Identities=21% Similarity=0.330 Sum_probs=200.3
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.++|+..+.||+|+||.||+|+.. +|+.||+|+++..... ....+.+|++++++++|+||+++++++.+.. .
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~ 80 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKH-----L 80 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCC-----C
Confidence 457888999999999999999975 6999999999754322 2345678999999999999999999987532 2
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
+..++||||+. ++|.+++......+++.++..++.|+++||+|||+. +++||||||+||++++++.+||+|||.+.
T Consensus 81 ~~~~lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~ 156 (309)
T cd07845 81 DSIFLVMEYCE-QDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLAR 156 (309)
T ss_pred CeEEEEEecCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceee
Confidence 34799999997 588888875545799999999999999999999999 99999999999999999999999999986
Q ss_pred hhhccC--CcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccc--ccccccc
Q 004195 636 LAEARG--KGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGT--DEARKSI 710 (769)
Q Consensus 636 ~~~~~~--~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~ 710 (769)
...... .........|.+||.+.+ ..++.++||||+||++|||++|++||...........+...... ...+...
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
T cd07845 157 TYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGF 236 (309)
T ss_pred ecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhh
Confidence 554321 111122345677887654 45789999999999999999999998754432221111111110 0000000
Q ss_pred cC---------c-cccCC---CCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 711 VD---------P-AVMNE---CSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 711 ~d---------~-~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.+ + ..... ........+.+++.+|++.||++|||++|+++|+||...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~ 296 (309)
T cd07845 237 SDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEK 296 (309)
T ss_pred hcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccC
Confidence 00 0 00000 001124457899999999999999999999999999744
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=307.35 Aligned_cols=254 Identities=18% Similarity=0.318 Sum_probs=198.2
Q ss_pred CCCCcCccccCCceeEEEEEe-CCCcEEEEEEccccCCC------ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 481 CFDSSSFMCDASHGQIYKGKL-TDGTLVAIRSLKMSKKS------SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~~------~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
+|+..+.||+|++|.||+|+. .+++.||+|.+...... ..+.+.+|++++++++|+||+++++++.+.+
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~---- 76 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDS---- 76 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCC----
Confidence 477889999999999999996 47899999999754311 1356889999999999999999999987643
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc-eeeecCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF-HVKINSYN 632 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~-~~kl~DFG 632 (769)
..++||||+++++|.+++.+.. ++++..+..++.|++.||+|||+. +++||||||+||+++.++ .+||+|||
T Consensus 77 ---~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg 149 (268)
T cd06630 77 ---HFNLFVEWMAGGSVSHLLSKYG-AFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFG 149 (268)
T ss_pred ---eEEEEEeccCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEcccc
Confidence 4899999999999999997544 689999999999999999999998 999999999999998775 59999999
Q ss_pred CchhhhccCC------cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccc
Q 004195 633 LPLLAEARGK------GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEA 706 (769)
Q Consensus 633 la~~~~~~~~------~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (769)
.+........ .....+..+.+||...+..++.++||||+|+++|||++|+.|+...............
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~------ 223 (268)
T cd06630 150 AAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKI------ 223 (268)
T ss_pred cccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHH------
Confidence 9865533211 1122334577889887788899999999999999999999998643221111111100
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 707 RKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 707 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
.........++....++.+++.+|+..+|++||++.|+++|+||.
T Consensus 224 ----~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 224 ----ASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred ----hccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 000001123334445688999999999999999999999999873
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=310.65 Aligned_cols=266 Identities=20% Similarity=0.289 Sum_probs=194.6
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC-ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS-SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++++|...+.||+|+||.||+|... +|+.||+|++...... ....+.+|++++++++|+||+++++++.+..
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~------ 76 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKE------ 76 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCC------
Confidence 4578989999999999999999865 6899999999754322 2346788999999999999999999987533
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||++ +++.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++++||+|||+++
T Consensus 77 -~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~ 151 (291)
T cd07870 77 -TLTFVFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLAR 151 (291)
T ss_pred -eEEEEEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEecccccc
Confidence 4899999996 677777654444688889999999999999999998 99999999999999999999999999986
Q ss_pred hhhccC--CcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchh--HHHHhhhhh-ccccccc---
Q 004195 636 LAEARG--KGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVV--VLVKDLLQV-NIGTDEA--- 706 (769)
Q Consensus 636 ~~~~~~--~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~--~~~~~~~~~-~~~~~~~--- 706 (769)
...... .........|.+||...+ ..++.++|||||||++|||+||++||..... +...+.... .......
T Consensus 152 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (291)
T cd07870 152 AKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPG 231 (291)
T ss_pred ccCCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhh
Confidence 532221 111223445677887654 3578899999999999999999999875332 111111000 0000000
Q ss_pred -------cccccC---ccccCCCCH--HHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 707 -------RKSIVD---PAVMNECSD--ESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 707 -------~~~~~d---~~~~~~~~~--~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
...... +........ .....+.+++.+|++.||++|||++|++.|+||
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 232 VSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred hhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 000000 000000000 013457899999999999999999999999986
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-35 Score=310.02 Aligned_cols=250 Identities=19% Similarity=0.249 Sum_probs=200.9
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|...+.||+|++|.||+++.. +++.||+|.+.... ....+.+.+|++++++++||||+++++++.+..
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------ 74 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDS------ 74 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCC------
Confidence 36788899999999999999975 68999999987542 123456889999999999999999999987643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 75 -~~~~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~ 149 (290)
T cd05580 75 -NLYLVMEYVPGGELFSHLRKSG-RFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAK 149 (290)
T ss_pred -eEEEEEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCcc
Confidence 4899999999999999997654 689999999999999999999998 99999999999999999999999999987
Q ss_pred hhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccc
Q 004195 636 LAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAV 715 (769)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 715 (769)
..... .........|++||.......+.++||||||+++|||++|+.||............. .. .+.+
T Consensus 150 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~---~~--------~~~~ 217 (290)
T cd05580 150 RVKGR-TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKIL---EG--------KVRF 217 (290)
T ss_pred ccCCC-CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh---cC--------CccC
Confidence 65433 222233455778998877788999999999999999999999987654322211111 00 0111
Q ss_pred cCCCCHHHHHHHHHHHHHcCcCCCCCCC-----CHHHHHHHhHhhh
Q 004195 716 MNECSDESLKRMMELCLRCLSNEPKDRP-----SVEDTLWNLQFAT 756 (769)
Q Consensus 716 ~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~~~~ 756 (769)
.... ...+.+++.+||+.||++|| +++|+++|+|+..
T Consensus 218 ~~~~----~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~ 259 (290)
T cd05580 218 PSFF----SPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAG 259 (290)
T ss_pred CccC----CHHHHHHHHHHccCCHHHccCcccCCHHHHHcCccccc
Confidence 1122 33488999999999999999 9999999999743
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-35 Score=317.01 Aligned_cols=270 Identities=17% Similarity=0.230 Sum_probs=201.3
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC--CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK--KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
..++|+..+.||+|+||.||+|+.. +|+.||||.+.... ....+.+.+|+.++++++||||+++++++...... ..
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-~~ 92 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSL-EE 92 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCc-cc
Confidence 4567999999999999999999965 79999999986432 22235677899999999999999999988643221 12
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
....++||||++ ++|.+.+... +++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 93 ~~~~~lv~e~~~-~~l~~~~~~~---l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg~~ 165 (353)
T cd07850 93 FQDVYLVMELMD-ANLCQVIQMD---LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 165 (353)
T ss_pred cCcEEEEEeccC-CCHHHHHhhc---CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCccc
Confidence 235799999996 5888887643 88999999999999999999998 9999999999999999999999999999
Q ss_pred hhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhccccc-cc-----
Q 004195 635 LLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIGTD-EA----- 706 (769)
Q Consensus 635 ~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~~~-~~----- 706 (769)
+....... .....+..|++||...+..++.++|||||||++|+|++|+.||...... ....... ..+.. ..
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 244 (353)
T cd07850 166 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIE-QLGTPSDEFMSRL 244 (353)
T ss_pred eeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHH-hcCCCCHHHHHHh
Confidence 75533222 1122345678899988888999999999999999999999998654321 1111111 00000 00
Q ss_pred ------------------cccccCcc----ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 707 ------------------RKSIVDPA----VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 707 ------------------~~~~~d~~----~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
+.+..... ............+.+++.+|++.||++|||+.|++.|+|+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~ 316 (353)
T cd07850 245 QPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINV 316 (353)
T ss_pred hhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhh
Confidence 00000000 000111223456889999999999999999999999999864
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-35 Score=306.94 Aligned_cols=253 Identities=20% Similarity=0.314 Sum_probs=198.7
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCc----EEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGT----LVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~----~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
++|...+.||+|+||.||+|... +|+ .||+|.+..... .....+.+|+.++++++||||++++++|.. .
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~---- 81 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-S---- 81 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-C----
Confidence 35677899999999999999864 343 689998875532 223578899999999999999999999975 2
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
..++||||+++|+|.+++......+++..+..++.|+++||+|||+. +++||||||+||++++++.+||+|||.
T Consensus 82 ---~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~ 155 (279)
T cd05057 82 ---QVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGL 155 (279)
T ss_pred ---ceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCcc
Confidence 27999999999999999986655799999999999999999999998 999999999999999999999999999
Q ss_pred chhhhccCCcc----eeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccc
Q 004195 634 PLLAEARGKGS----AEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARK 708 (769)
Q Consensus 634 a~~~~~~~~~~----~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (769)
++......... ......|++||......++.++|||||||++||++| |++|+...........+.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~------ 229 (279)
T cd05057 156 AKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGER------ 229 (279)
T ss_pred cccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCC------
Confidence 97654322111 111234778888877889999999999999999999 9999876544333332221100
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
......++ ..+.+++.+||..+|++||++.++++.+.....
T Consensus 230 ----~~~~~~~~----~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 230 ----LPQPPICT----IDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred ----CCCCCCCC----HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 00011122 347889999999999999999999998886543
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-35 Score=306.47 Aligned_cols=260 Identities=19% Similarity=0.326 Sum_probs=200.9
Q ss_pred HHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCC
Q 004195 477 EATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 477 ~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~ 554 (769)
.++++|+..+.||+|++|.||+|+.. +++.+|+|.+..... ..+++.+|+++++++ +|+||+++++++.+.... ..
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~-~~ 80 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPP-GN 80 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCC-Cc
Confidence 45788999999999999999999975 688999999875432 346789999999999 699999999999764421 12
Q ss_pred cceEEEEEeccCCCchhhhhcCC---CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCC
Q 004195 555 ISIIYLIFEYAPNETLRSFISGP---GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSY 631 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DF 631 (769)
....++||||+++++|.+++... ...+++..+..++.|+++||+|||+. +++||||+|+||++++++.+|++||
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d~ 157 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDF 157 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECCC
Confidence 45689999999999999988632 34789999999999999999999998 9999999999999999999999999
Q ss_pred CCchhhhccC--CcceeecCCCcchhhhcc-----CCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhcccc
Q 004195 632 NLPLLAEARG--KGSAEVSSPAKKTSVLAR-----TEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIGT 703 (769)
Q Consensus 632 Gla~~~~~~~--~~~~~~~~~~~~pe~~~~-----~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~~ 703 (769)
|++....... .....+...|.+||.+.. ..++.++|||||||++|||+||++||...... ....... .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~- 233 (275)
T cd06608 158 GVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPR---N- 233 (275)
T ss_pred ccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhc---c-
Confidence 9986443211 112223445777886543 34688999999999999999999998653221 1111110 0
Q ss_pred ccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 704 DEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 704 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
..+.. ..+......+.+++.+||..||++|||+.|+++|+|.
T Consensus 234 -------~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 234 -------PPPTL--KSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred -------CCCCC--CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 00111 1122244568899999999999999999999999884
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=312.48 Aligned_cols=264 Identities=18% Similarity=0.296 Sum_probs=198.7
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC--CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK--KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
++|+..+.||+|++|.||+|+.+ +++.||||+++... ....+.+.+|++++++++|+||+++++++.+.+
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~------- 73 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKG------- 73 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECC-------
Confidence 36888899999999999999976 68899999987542 223467899999999999999999999997633
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++||||++++.+..+..+. ..+++..+..++.|+++||+|||+. +++||||||+||++++++.+||+|||++..
T Consensus 74 ~~~iv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~ 149 (288)
T cd07833 74 RLYLVFEYVERTLLELLEASP-GGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARA 149 (288)
T ss_pred EEEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccc
Confidence 389999999987777666543 3689999999999999999999998 999999999999999999999999999866
Q ss_pred hhccCC---cceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccc-cc------
Q 004195 637 AEARGK---GSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGT-DE------ 705 (769)
Q Consensus 637 ~~~~~~---~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~-~~------ 705 (769)
...... ........+++||..... .++.++||||||+++|||++|++||.................. ..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (288)
T cd07833 150 LRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELF 229 (288)
T ss_pred cCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhc
Confidence 543321 112233456788888777 7899999999999999999999998754322111111100000 00
Q ss_pred ----cc-----ccccCccc-cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 706 ----AR-----KSIVDPAV-MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 706 ----~~-----~~~~d~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
.. ....++.. ...++.....++.+++.+||..+|++||+++++++|.||
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 230 SSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred ccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 00 00000000 001112224568999999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-35 Score=303.38 Aligned_cols=245 Identities=20% Similarity=0.372 Sum_probs=193.7
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
++|...+.||+|+||.||+|.. +++.||+|.++.. ...+.+.+|+.++++++||||+++++++.... .+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--------~~ 74 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCD--VTAQAFLEETAVMTKLHHKNLVRLLGVILHNG--------LY 74 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCc--chHHHHHHHHHHHHhCCCCCcCeEEEEEcCCC--------cE
Confidence 3577889999999999999975 5788999998643 23467899999999999999999999986422 68
Q ss_pred EEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 560 LIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
+||||+++++|.+++... ...+++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||++....
T Consensus 75 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~ 151 (254)
T cd05083 75 IVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGS 151 (254)
T ss_pred EEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceecc
Confidence 999999999999999743 33689999999999999999999998 99999999999999999999999999986543
Q ss_pred ccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCccccC
Q 004195 639 ARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMN 717 (769)
Q Consensus 639 ~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 717 (769)
... ........|.+||......++.++|||||||++|||++ |++||................ .+....
T Consensus 152 ~~~-~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~----------~~~~~~ 220 (254)
T cd05083 152 MGV-DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGY----------RMEPPE 220 (254)
T ss_pred ccC-CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCC----------CCCCCC
Confidence 221 11122334677888877889999999999999999998 999987654333222221110 011112
Q ss_pred CCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 718 ECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 718 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
.+ +..+.+++.+||+.+|++||++++++..+.
T Consensus 221 ~~----~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 252 (254)
T cd05083 221 GC----PADVYVLMTSCWETEPKKRPSFHKLREKLE 252 (254)
T ss_pred cC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHc
Confidence 22 344889999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-35 Score=307.15 Aligned_cols=258 Identities=18% Similarity=0.329 Sum_probs=205.3
Q ss_pred HHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 477 EATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 477 ~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
..++.|+..+.||+|++|.||+|..+ ++..||+|++..... ..+.+.+|++++++++|+||+++++++....
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~------ 88 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGD------ 88 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECC------
Confidence 45667888899999999999999987 688999999976543 4567899999999999999999999988643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++|+||+++++|.+++......+++..+..++.|++.||+|||+. +++|+||||+||+++.++.+||+|||.+.
T Consensus 89 -~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~ 164 (286)
T cd06614 89 -ELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAA 164 (286)
T ss_pred -EEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhh
Confidence 38999999999999999986544799999999999999999999998 99999999999999999999999999875
Q ss_pred hhhccCC--cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCc
Q 004195 636 LAEARGK--GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 636 ~~~~~~~--~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
....... ........|.+||...+..++.++|||||||++|||++|+.|+.............. . ......
T Consensus 165 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~--~---~~~~~~-- 237 (286)
T cd06614 165 QLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITT--K---GIPPLK-- 237 (286)
T ss_pred hhccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--c---CCCCCc--
Confidence 4432211 111223457788888778899999999999999999999999875432211111100 0 000000
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
........+.+++.+|++.+|.+||++.++++|+|+...
T Consensus 238 -----~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 276 (286)
T cd06614 238 -----NPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKA 276 (286)
T ss_pred -----chhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhcc
Confidence 011123458899999999999999999999999998863
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-35 Score=315.38 Aligned_cols=253 Identities=19% Similarity=0.313 Sum_probs=195.8
Q ss_pred CCCCcCccccCCceeEEEEEeC--------CCcEEEEEEccccCC-CChhHHHHHHHHHhhc-cCCceeeEeeeeeccCC
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT--------DGTLVAIRSLKMSKK-SSPHMYTYHIELISKL-RHSNLVSALGHCLDFSL 550 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~--------~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~ 550 (769)
+|...+.||+|+||.||+|+.. .+..||+|.++.... ...+++.+|+++++++ +||||++++++|.+...
T Consensus 13 ~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 92 (334)
T cd05100 13 RLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 92 (334)
T ss_pred HeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCc
Confidence 5778899999999999999742 123799998875322 2245788999999999 79999999999976433
Q ss_pred CCCCcceEEEEEeccCCCchhhhhcCC---------------CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccc
Q 004195 551 DDPSISIIYLIFEYAPNETLRSFISGP---------------GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKI 615 (769)
Q Consensus 551 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp 615 (769)
.++||||+++|+|.+++.+. ...++|.++..++.|+++||+|||+. +|+||||||
T Consensus 93 -------~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp 162 (334)
T cd05100 93 -------LYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAA 162 (334)
T ss_pred -------eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---Ceecccccc
Confidence 79999999999999998632 23588999999999999999999998 999999999
Q ss_pred cceeeCCCceeeecCCCCchhhhccCCc----ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchh
Q 004195 616 TDVLLDENFHVKINSYNLPLLAEARGKG----SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVV 690 (769)
Q Consensus 616 ~NILld~~~~~kl~DFGla~~~~~~~~~----~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~ 690 (769)
+||++++++.+||+|||+++........ .......|++||......++.++|||||||++|||++ |..||.....
T Consensus 163 ~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 242 (334)
T cd05100 163 RNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV 242 (334)
T ss_pred ceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH
Confidence 9999999999999999998654322111 1111234778998888889999999999999999998 8888876543
Q ss_pred HHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 691 VLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
......+.... .+.....+ ..++.+++.+||+.+|++||++.|+++++..+..
T Consensus 243 ~~~~~~~~~~~----------~~~~~~~~----~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~ 295 (334)
T cd05100 243 EELFKLLKEGH----------RMDKPANC----THELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT 295 (334)
T ss_pred HHHHHHHHcCC----------CCCCCCCC----CHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence 33222211100 00111122 2348899999999999999999999999986653
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-35 Score=312.13 Aligned_cols=253 Identities=15% Similarity=0.181 Sum_probs=197.3
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC---CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK---SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|+..+.||+|+||.||+++.. +++.||+|.+..... ...+.+.+|+++++.++||||+++++.+.+.+
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~------ 74 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKR------ 74 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCC------
Confidence 46888899999999999999976 688999999875432 22356789999999999999999999987533
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+++++|.+++...+ .+++..+..++.|+++||+|||+. +++||||||+||+++.++.+|++|||+++
T Consensus 75 -~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~ 149 (305)
T cd05609 75 -HLCMVMEYVEGGDCATLLKNIG-ALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSK 149 (305)
T ss_pred -EEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCcc
Confidence 4899999999999999997554 689999999999999999999998 99999999999999999999999999886
Q ss_pred hhhccC-----------------CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhh
Q 004195 636 LAEARG-----------------KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQ 698 (769)
Q Consensus 636 ~~~~~~-----------------~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~ 698 (769)
...... .........|.+||.+....++.++|||||||++|||++|+.||.+...........
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~ 229 (305)
T cd05609 150 IGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVI 229 (305)
T ss_pred ccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 321000 001122335678888877889999999999999999999999987543322211111
Q ss_pred hccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCC---HHHHHHHhHhh
Q 004195 699 VNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPS---VEDTLWNLQFA 755 (769)
Q Consensus 699 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~~l~~~ 755 (769)
. .....+.....++ ..+.+++.+||+.+|++||+ +.++++|+|+.
T Consensus 230 ~--------~~~~~~~~~~~~~----~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~ 277 (305)
T cd05609 230 S--------DDIEWPEGDEALP----ADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFL 277 (305)
T ss_pred h--------cccCCCCccccCC----HHHHHHHHHHhccChhhccCccCHHHHHhCcccc
Confidence 0 0011111111223 34889999999999999998 79999999974
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-35 Score=299.38 Aligned_cols=251 Identities=21% Similarity=0.385 Sum_probs=201.6
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
+|+..+.||+|++|.||++... +++.+|+|++........+.+.+|++++++++|+||+++++++.... ..+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-------~~~ 73 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKD-------ELW 73 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-------eEE
Confidence 4677899999999999999976 78999999998655445578999999999999999999999987643 389
Q ss_pred EEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhc
Q 004195 560 LIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEA 639 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~ 639 (769)
+++||+++++|.+++......+++..+..++.++++||+|||+. +++||||+|+||++++++.+||+|||.+.....
T Consensus 74 l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 150 (253)
T cd05122 74 IVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSD 150 (253)
T ss_pred EEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeeccccccccc
Confidence 99999999999999986545799999999999999999999998 999999999999999999999999999866544
Q ss_pred cC-CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccCC
Q 004195 640 RG-KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNE 718 (769)
Q Consensus 640 ~~-~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 718 (769)
.. .........|.+||......++.++||||||+++|||++|+.|+.............. .......++
T Consensus 151 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~----- 220 (253)
T cd05122 151 TKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT-----NGPPGLRNP----- 220 (253)
T ss_pred cccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh-----cCCCCcCcc-----
Confidence 32 2233344567889988777889999999999999999999999875432211111110 000001000
Q ss_pred CCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 719 CSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 719 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
......+.+++.+|++.||++|||+.|+++|+|
T Consensus 221 --~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 221 --EKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred --cccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 111344889999999999999999999999986
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-35 Score=336.78 Aligned_cols=253 Identities=17% Similarity=0.251 Sum_probs=193.1
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC---hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS---PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~---~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|+..+.||+|+||.||+|+.. +|+.||||+++...... .+.+.+|++++++++||||+++++++.+.+
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~------ 75 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGD------ 75 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCC------
Confidence 46888999999999999999975 68999999997542222 356889999999999999999999997643
Q ss_pred ceEEEEEeccCCCchhhhhcCC----------CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCce
Q 004195 556 SIIYLIFEYAPNETLRSFISGP----------GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH 625 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~----------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~ 625 (769)
..++||||+++|+|.+++... ...+++..+.+++.||++||+|||+. +|+||||||+||+++.++.
T Consensus 76 -~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~ 151 (932)
T PRK13184 76 -PVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGE 151 (932)
T ss_pred -EEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCC
Confidence 389999999999999988521 12467788899999999999999998 9999999999999999999
Q ss_pred eeecCCCCchhhhccC--------------------CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCC
Q 004195 626 VKINSYNLPLLAEARG--------------------KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPIT 685 (769)
Q Consensus 626 ~kl~DFGla~~~~~~~--------------------~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~ 685 (769)
+||+|||+++...... .....++..|++||...+..++.++|||||||++|||+||++||
T Consensus 152 vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF 231 (932)
T PRK13184 152 VVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPY 231 (932)
T ss_pred EEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCC
Confidence 9999999996541110 01123455678899988888999999999999999999999999
Q ss_pred CCchhHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCC-HHHHHHHhHh
Q 004195 686 SENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPS-VEDTLWNLQF 754 (769)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~~l~~ 754 (769)
.......... ... ..+|..... ..+.+..+.+++.+|++.||++||+ ++++.+.+..
T Consensus 232 ~~~~~~ki~~--~~~---------i~~P~~~~p-~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~ 289 (932)
T PRK13184 232 RRKKGRKISY--RDV---------ILSPIEVAP-YREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEP 289 (932)
T ss_pred CCcchhhhhh--hhh---------ccChhhccc-cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 7533221111 000 011110000 0122334888999999999999975 5555555543
|
|
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-35 Score=306.83 Aligned_cols=254 Identities=18% Similarity=0.301 Sum_probs=199.5
Q ss_pred CCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEE
Q 004195 482 FDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYL 560 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~l 560 (769)
|...+.||+|++|.||+|... +++.||+|++........+.+.+|+.++++++||||+++++++...+ ..++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~-------~~~~ 93 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGD-------ELWV 93 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCC-------eEEE
Confidence 444579999999999999965 78999999987554444567889999999999999999999987643 3899
Q ss_pred EEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhcc
Q 004195 561 IFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEAR 640 (769)
Q Consensus 561 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~ 640 (769)
|+||+++++|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+|++|||.+......
T Consensus 94 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~ 168 (285)
T cd06648 94 VMEFLEGGALTDIVTHT--RMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKE 168 (285)
T ss_pred EEeccCCCCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccC
Confidence 99999999999999862 589999999999999999999998 9999999999999999999999999987644322
Q ss_pred CC--cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccCC
Q 004195 641 GK--GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNE 718 (769)
Q Consensus 641 ~~--~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 718 (769)
.. ........|.+||...+..++.++|||||||++|||++|+.||............... ..+....
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~----------~~~~~~~- 237 (285)
T cd06648 169 VPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDN----------LPPKLKN- 237 (285)
T ss_pred CcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhc----------CCCCCcc-
Confidence 11 1122334577899888888999999999999999999999998654322111111100 0011100
Q ss_pred CCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 719 CSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 719 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
.......+.+++.+||+.+|++||++.++++|.|+....+
T Consensus 238 -~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 277 (285)
T cd06648 238 -LHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGP 277 (285)
T ss_pred -cccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCCC
Confidence 1112234899999999999999999999999999876543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-35 Score=302.62 Aligned_cols=254 Identities=20% Similarity=0.294 Sum_probs=198.9
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|+..+.||.|+||+||+|... ++..+|+|++..... .....+.+|+++++.++|+||+++++.+.... .
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-------~ 73 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGD-------E 73 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCC-------E
Confidence 46888999999999999999965 688999999875432 23467899999999999999999999887633 4
Q ss_pred EEEEEeccCCCchhhhhcCC--CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 558 IYLIFEYAPNETLRSFISGP--GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
.++||||+++++|.+++... ...+++.....++.|++.||+|||+. +++||||||+||++++++.+|++|||++.
T Consensus 74 ~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~ 150 (267)
T cd06610 74 LWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSA 150 (267)
T ss_pred EEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHH
Confidence 89999999999999999743 23689999999999999999999998 99999999999999999999999999986
Q ss_pred hhhccCCc------ceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhcccccccc
Q 004195 636 LAEARGKG------SAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIGTDEAR 707 (769)
Q Consensus 636 ~~~~~~~~------~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~~~~~~ 707 (769)
........ ...+...|++||.+... .++.++|||||||++|||++|+.||...... ........ .
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~---~---- 223 (267)
T cd06610 151 SLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQN---D---- 223 (267)
T ss_pred HhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcC---C----
Confidence 55432221 11233456778877665 7899999999999999999999998754321 11111110 0
Q ss_pred ccccCccccCCC-CHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 708 KSIVDPAVMNEC-SDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 708 ~~~~d~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
.+.+.... .......+.+++.+|++.||++||+++|+++|+||
T Consensus 224 ----~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 224 ----PPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred ----CCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 01111110 11233458899999999999999999999999986
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-35 Score=309.92 Aligned_cols=271 Identities=16% Similarity=0.280 Sum_probs=197.7
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC--CChhHHHHHHHHHhhccCCceeeEeeeeeccCCC-CCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK--SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLD-DPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~-~~~~ 555 (769)
++|+..+.||+|+||.||+|+.. +++.||||.+..... .....+.+|++++++++||||++++++|...... ....
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 91 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK 91 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence 46888999999999999999975 699999999865422 2234567899999999999999999998764432 1223
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
...++||||++ ++|.+.+......+++.++..++.|+++||+|||+. +++||||||+||+++.++.+||+|||++.
T Consensus 92 ~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 167 (310)
T cd07865 92 GSFYLVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADFGLAR 167 (310)
T ss_pred ceEEEEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcCCCcc
Confidence 45799999996 588888875555789999999999999999999998 99999999999999999999999999986
Q ss_pred hhhccCCc------ceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccc-c-cc
Q 004195 636 LAEARGKG------SAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGT-D-EA 706 (769)
Q Consensus 636 ~~~~~~~~------~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~-~-~~ 706 (769)
........ .......|++||...+. .++.++||||||+++|||+||++|+...........+....+. . +.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (310)
T cd07865 168 AFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEV 247 (310)
T ss_pred cccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Confidence 54322211 11223456778876554 4688999999999999999999998765432222111111100 0 00
Q ss_pred cccc-----cCc-cccCCC---------CHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 707 RKSI-----VDP-AVMNEC---------SDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 707 ~~~~-----~d~-~~~~~~---------~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
+... .+. ...... +......+.+++.+||..||++|||++|+++|+||
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 248 WPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred cccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 0000 000 000000 00012346789999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-35 Score=303.19 Aligned_cols=246 Identities=18% Similarity=0.328 Sum_probs=181.0
Q ss_pred CccccCCceeEEEEEeCC---CcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEE
Q 004195 486 SFMCDASHGQIYKGKLTD---GTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLI 561 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~~---g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV 561 (769)
+.||+|+||.||+|...+ ...+|+|.+..... .....+.+|+++++.++||||++++++|.+... .++|
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~-------~~lv 73 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIP-------YLLV 73 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCc-------eEEE
Confidence 358999999999997543 45788998764432 223568899999999999999999999876443 8999
Q ss_pred EeccCCCchhhhhcCCC----CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 562 FEYAPNETLRSFISGPG----YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 562 ~Ey~~~gsL~~~l~~~~----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
|||+++|+|.+++.... ...++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|||++...
T Consensus 74 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~ 150 (269)
T cd05042 74 LEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQ 150 (269)
T ss_pred EEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEecccccccc
Confidence 99999999999997432 2356788899999999999999998 9999999999999999999999999998543
Q ss_pred hccC----CcceeecCCCcchhhhc-------cCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHH-HHhhhhhccccc
Q 004195 638 EARG----KGSAEVSSPAKKTSVLA-------RTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVL-VKDLLQVNIGTD 704 (769)
Q Consensus 638 ~~~~----~~~~~~~~~~~~pe~~~-------~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~-~~~~~~~~~~~~ 704 (769)
.... .........|++||... ...++.++|||||||++|||++ |+.||....... .......
T Consensus 151 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~----- 225 (269)
T cd05042 151 YPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVRE----- 225 (269)
T ss_pred ccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhc-----
Confidence 2211 11111223467788753 2356889999999999999999 777876543222 1111111
Q ss_pred cccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHh
Q 004195 705 EARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNL 752 (769)
Q Consensus 705 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 752 (769)
......++.+...++ ..+.+++..|| .||++|||++||++.+
T Consensus 226 -~~~~~~~~~~~~~~~----~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 226 -QDIKLPKPQLDLKYS----DRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred -cCccCCCCcccccCC----HHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 111122232222333 33677888898 5999999999999875
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-35 Score=302.02 Aligned_cols=250 Identities=17% Similarity=0.271 Sum_probs=196.4
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC--CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK--SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
+|+..+.||+|+||.||+|... +++.+|||.+..... ...+.+.+|++++++++||||+++++.+.... .
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-------~ 73 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDK-------A 73 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCC-------E
Confidence 4777899999999999999965 688999999975432 23457889999999999999999999886533 4
Q ss_pred EEEEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC-ceeeecCCCCch
Q 004195 558 IYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN-FHVKINSYNLPL 635 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~-~~~kl~DFGla~ 635 (769)
.++||||+++++|.+++... ...+++..+.+++.++++||+|||+. +++||||||+||+++++ +.+|++|||.+.
T Consensus 74 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~ 150 (256)
T cd08220 74 LMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISK 150 (256)
T ss_pred EEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCce
Confidence 89999999999999999743 34689999999999999999999998 99999999999999854 568999999986
Q ss_pred hhhccCCc-ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCcc
Q 004195 636 LAEARGKG-SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 636 ~~~~~~~~-~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
........ .......|++||......++.++||||||+++|+|++|+.|+.............. .. .+.
T Consensus 151 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~--~~--------~~~ 220 (256)
T cd08220 151 ILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMS--GT--------FAP 220 (256)
T ss_pred ecCCCccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHh--cC--------CCC
Confidence 55433221 22334567889988777889999999999999999999999875433221111110 00 011
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
+... ....+.+++.+||+.+|++|||+.|+++|+++
T Consensus 221 ~~~~----~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 221 ISDR----YSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred CCCC----cCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 1112 23348899999999999999999999999874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-35 Score=303.70 Aligned_cols=244 Identities=21% Similarity=0.337 Sum_probs=189.1
Q ss_pred CccccCCceeEEEEEeCC-------CcEEEEEEccccC-CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 486 SFMCDASHGQIYKGKLTD-------GTLVAIRSLKMSK-KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~~-------g~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
+.||+|+||.||+|+..+ ++.+|||.+.... ......+.+|++++++++||||++++++|.+...
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~------- 73 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEP------- 73 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCC-------
Confidence 468999999999998642 2579999886543 2335678999999999999999999999876443
Q ss_pred EEEEEeccCCCchhhhhcC------CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc-----ee
Q 004195 558 IYLIFEYAPNETLRSFISG------PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF-----HV 626 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~-----~~ 626 (769)
.++||||+++++|.+++.+ ....++|.++..++.|++.||+|||+. +++|+||||+||+++.++ .+
T Consensus 74 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~ 150 (269)
T cd05044 74 QYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVV 150 (269)
T ss_pred eEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcce
Confidence 7999999999999999863 223588999999999999999999998 999999999999999877 89
Q ss_pred eecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhcc
Q 004195 627 KINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNI 701 (769)
Q Consensus 627 kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~ 701 (769)
|++|||+++....... ........|.+||......++.++|||||||++|||+| |+.||...........+...
T Consensus 151 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~- 229 (269)
T cd05044 151 KIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAG- 229 (269)
T ss_pred EECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcC-
Confidence 9999999865432211 11122345778998888889999999999999999998 99988654322221111100
Q ss_pred ccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 702 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
. .. ..+...+..+.+++.+||+.+|++||+++++++.+.
T Consensus 230 ---~------~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 230 ---G------RL----QKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred ---C------cc----CCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 0 00 111223345889999999999999999999998774
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-35 Score=302.50 Aligned_cols=252 Identities=18% Similarity=0.342 Sum_probs=196.5
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
+|...+.||+|+||.||+|... +++.||+|.++..... ..+.+.+|++++++++|+||+++++++.+.+ .
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~-------~ 73 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHRE-------K 73 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCC-------E
Confidence 4777899999999999999965 7899999999865443 3467899999999999999999999886533 3
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.++|+||+++++|.+++.... .+++..+..++.++++||+|||+. +|+|+||||+||++++++.+||+|||.+...
T Consensus 74 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~ 149 (264)
T cd06626 74 VYIFMEYCSGGTLEELLEHGR-ILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKL 149 (264)
T ss_pred EEEEEecCCCCcHHHHHhhcC-CCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccccccccc
Confidence 899999999999999998654 589999999999999999999998 9999999999999999999999999998654
Q ss_pred hccCCc------ceeecCCCcchhhhccCC---CCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccc
Q 004195 638 EARGKG------SAEVSSPAKKTSVLARTE---QDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARK 708 (769)
Q Consensus 638 ~~~~~~------~~~~~~~~~~pe~~~~~~---~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (769)
...... .......|.+||...... ++.++||||||+++||+++|+.||.......... ......
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~-~~~~~~------ 222 (264)
T cd06626 150 KNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIM-FHVGAG------ 222 (264)
T ss_pred CCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHH-HHHhcC------
Confidence 332211 112334567788876655 7899999999999999999999986532111101 010000
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
..+.+.... .....+.+++.+||+.+|++||++.|++.|+|.
T Consensus 223 --~~~~~~~~~--~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 223 --HKPPIPDSL--QLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred --CCCCCCccc--ccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 011111111 113347899999999999999999999999873
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-35 Score=303.51 Aligned_cols=249 Identities=17% Similarity=0.287 Sum_probs=195.7
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC--CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK--SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
+|+..+.||+|+||.||+|... +|..||+|.+..... ...+.+.+|++++++++|+||+++++++.+.. .
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~-------~ 73 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENG-------R 73 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCC-------e
Confidence 4777899999999999999976 688999999875422 23457889999999999999999999987643 3
Q ss_pred EEEEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc-eeeecCCCCch
Q 004195 558 IYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF-HVKINSYNLPL 635 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~-~~kl~DFGla~ 635 (769)
.++|+||+++++|.+++.+. ...+++..+..++.|+++||+|||+. +++|+||||+||++++++ .+|++|||.+.
T Consensus 74 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~ 150 (257)
T cd08225 74 LFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIAR 150 (257)
T ss_pred EEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccch
Confidence 89999999999999998743 33589999999999999999999998 999999999999998875 57999999986
Q ss_pred hhhccCCc--ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccccccccccccC
Q 004195 636 LAEARGKG--SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTDEARKSIVD 712 (769)
Q Consensus 636 ~~~~~~~~--~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~d 712 (769)
........ ...+...|.+||......++.++|||||||++|||++|+.|+....... ...... . ...
T Consensus 151 ~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~------~----~~~ 220 (257)
T cd08225 151 QLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQ------G----YFA 220 (257)
T ss_pred hccCCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhc------c----cCC
Confidence 55332211 1123345677888877789999999999999999999999987543221 111110 0 011
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 713 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
+ ..... ...+.+++.+|+..+|++|||+.|+++|+|+
T Consensus 221 ~-~~~~~----~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 221 P-ISPNF----SRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred C-CCCCC----CHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 1 11122 2348899999999999999999999999985
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-35 Score=312.82 Aligned_cols=253 Identities=17% Similarity=0.259 Sum_probs=200.2
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC---ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS---SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~---~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|+..+.||+|++|.||+|... +++.||+|.+...... ..+.+.+|++++++++||||+++++++.+..
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~------ 74 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTET------ 74 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCC------
Confidence 36888899999999999999976 5899999999765332 3356888999999999999999999987533
Q ss_pred ceEEEEEeccCCCchhhhhcC-CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 556 SIIYLIFEYAPNETLRSFISG-PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
..++||||+++++|.+++.+ ....+++..+..++.|+++||+|||+. +++||||||+||+++.++.++|+|||++
T Consensus 75 -~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~ 150 (316)
T cd05574 75 -YLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLS 150 (316)
T ss_pred -EEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchh
Confidence 48999999999999999874 335789999999999999999999998 9999999999999999999999999998
Q ss_pred hhhhccCCc-------------------------------ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCC
Q 004195 635 LLAEARGKG-------------------------------SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRP 683 (769)
Q Consensus 635 ~~~~~~~~~-------------------------------~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~ 683 (769)
......... ...++..|++||...+..++.++|||||||++|||++|+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~ 230 (316)
T cd05574 151 KQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTT 230 (316)
T ss_pred hcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCC
Confidence 543221100 0112345778998888889999999999999999999999
Q ss_pred CCCCchhHH-HHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCC----HHHHHHHhHhhh
Q 004195 684 ITSENVVVL-VKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPS----VEDTLWNLQFAT 756 (769)
Q Consensus 684 p~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs----~~evl~~l~~~~ 756 (769)
||....... ........ +.... .......+.+++.+|++.||++||+ ++|++.|+||..
T Consensus 231 pf~~~~~~~~~~~~~~~~------------~~~~~--~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~ 294 (316)
T cd05574 231 PFKGSNRDETFSNILKKE------------VTFPG--SPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRG 294 (316)
T ss_pred CCCCCchHHHHHHHhcCC------------ccCCC--ccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhc
Confidence 986543221 11111100 00000 0113345899999999999999999 999999999864
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-35 Score=306.94 Aligned_cols=263 Identities=16% Similarity=0.216 Sum_probs=192.2
Q ss_pred CCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC-ChhHHHHHHHHHhhcc-CCceeeEeeeeeccCCCCCCcceE
Q 004195 482 FDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS-SPHMYTYHIELISKLR-HSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
|+..+.||+|+||.||+|+.. +++.||+|+++..... ......+|+.++.++. |+||+++++++.+.. .+..
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~-----~~~~ 75 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRK-----TGRL 75 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCC-----CCcE
Confidence 556788999999999999965 6899999998754322 2234567899999885 999999999998642 1248
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
++||||++ |++.+.+......++|.++..++.|++.||+|||+. +++||||||+||+++. +.+||+|||+++...
T Consensus 76 ~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~ 150 (282)
T cd07831 76 ALVFELMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIY 150 (282)
T ss_pred EEEEecCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccccccc
Confidence 99999997 588888875445789999999999999999999998 9999999999999999 999999999987553
Q ss_pred ccCCc-ceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhccccccccc-------
Q 004195 639 ARGKG-SAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIGTDEARK------- 708 (769)
Q Consensus 639 ~~~~~-~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~------- 708 (769)
..... .......|.+||.+.. ..++.++|||||||++|||++|++||...... .+...........+.+.
T Consensus 151 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (282)
T cd07831 151 SKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSR 230 (282)
T ss_pred cCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccc
Confidence 32221 1122345677886543 45789999999999999999999999654322 11111111000000000
Q ss_pred --cccCccccC----CCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 709 --SIVDPAVMN----ECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 709 --~~~d~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
....+.... ...+..+..+.+++.+||+.+|++||+++++++|+||
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 231 HMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred cccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 000000000 0011234569999999999999999999999999986
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=305.62 Aligned_cols=251 Identities=18% Similarity=0.215 Sum_probs=199.6
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC---CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK---SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
+|+..+.||+|+||.||+|+.. +++.||+|.+..... ...+.+.+|++++++++||||+++++++.+..
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------- 73 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEE------- 73 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCC-------
Confidence 4778899999999999999976 689999999975432 23467899999999999999999999886533
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++|+||+++++|.+++... ..+++..+..++.|+++||+|||+. +++|+||||+||++++++.++++|||.+..
T Consensus 74 ~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~ 149 (258)
T cd05578 74 NMYLVVDLLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATK 149 (258)
T ss_pred eEEEEEeCCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccc
Confidence 489999999999999999765 3789999999999999999999998 999999999999999999999999999865
Q ss_pred hhccC-CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccc
Q 004195 637 AEARG-KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAV 715 (769)
Q Consensus 637 ~~~~~-~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 715 (769)
..... .........|.+||......++.++||||||+++|+|++|+.|+................. ..+
T Consensus 150 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--------~~~-- 219 (258)
T cd05578 150 VTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET--------ADV-- 219 (258)
T ss_pred cCCCccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc--------ccc--
Confidence 43321 1122233456789988888889999999999999999999999876542211111111000 001
Q ss_pred cCCCCHHHHHHHHHHHHHcCcCCCCCCCCH--HHHHHHhHh
Q 004195 716 MNECSDESLKRMMELCLRCLSNEPKDRPSV--EDTLWNLQF 754 (769)
Q Consensus 716 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~--~evl~~l~~ 754 (769)
..+...+..+.+++.+||+.||.+||++ +|+++|+||
T Consensus 220 --~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 220 --LYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred --cCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 1112223458899999999999999999 999999885
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-35 Score=314.01 Aligned_cols=273 Identities=15% Similarity=0.231 Sum_probs=201.7
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC--CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK--SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.++|+..+.||+|++|.||+|+.. +|+.||+|++..... .....+.+|+.++++++||||+++++++..... ..
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~---~~ 80 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGA---DF 80 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCC---CC
Confidence 467888999999999999999965 699999999875422 234567889999999999999999998764332 23
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
...++||||+. |+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++
T Consensus 81 ~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~ 155 (334)
T cd07855 81 KDVYVVMDLME-SDLHHIIHSDQ-PLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMAR 155 (334)
T ss_pred ceEEEEEehhh-hhHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccce
Confidence 45899999996 68999987554 589999999999999999999998 99999999999999999999999999986
Q ss_pred hhhccCC------cceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccc--cc
Q 004195 636 LAEARGK------GSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTD--EA 706 (769)
Q Consensus 636 ~~~~~~~------~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~--~~ 706 (769)
....... ........|.+||.+.. ..++.++|||||||++|||++|++||...........+....+.. ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~ 235 (334)
T cd07855 156 GLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEV 235 (334)
T ss_pred eecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHh
Confidence 5432211 11123345677887654 468999999999999999999999997543221111111111100 00
Q ss_pred --------cccc---cCcccc---CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 707 --------RKSI---VDPAVM---NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 707 --------~~~~---~d~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
.... ...... ....+.....+.+++.+|++.+|++||++++++.|+|+.....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~ 302 (334)
T cd07855 236 LNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHD 302 (334)
T ss_pred hhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccC
Confidence 0000 000000 0011123456899999999999999999999999999975443
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=310.86 Aligned_cols=265 Identities=17% Similarity=0.231 Sum_probs=194.5
Q ss_pred CccccC--CceeEEEEEeC-CCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEE
Q 004195 486 SFMCDA--SHGQIYKGKLT-DGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYL 560 (769)
Q Consensus 486 ~~iG~G--~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~l 560 (769)
..||+| +||+||+|+.. +|+.||||.+....... .+.+.+|+.+++.++||||++++++|...+ ..++
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~-------~~~~ 76 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGS-------WLWV 76 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCC-------ceEE
Confidence 456766 89999999975 79999999987543222 356888999999999999999999998644 3899
Q ss_pred EEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhc
Q 004195 561 IFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEA 639 (769)
Q Consensus 561 V~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~ 639 (769)
||||++++++.+++.+. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|++|||.+.....
T Consensus 77 v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~ 153 (328)
T cd08226 77 ISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVR 153 (328)
T ss_pred EEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhc
Confidence 99999999999998743 23589999999999999999999998 999999999999999999999999986532211
Q ss_pred cCC-c--------ceeecCCCcchhhhcc--CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccccc---
Q 004195 640 RGK-G--------SAEVSSPAKKTSVLAR--TEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTD--- 704 (769)
Q Consensus 640 ~~~-~--------~~~~~~~~~~pe~~~~--~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~--- 704 (769)
... . ......+|++||...+ ..++.++|||||||++|||++|++||....... ............
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 233 (328)
T cd08226 154 NGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDI 233 (328)
T ss_pred cCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccc
Confidence 110 0 0112335788888765 347899999999999999999999987543211 111110000000
Q ss_pred ------c----------------------ccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 705 ------E----------------------ARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 705 ------~----------------------~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
. ......+..............+.+++.+||+.||++|||++|+++|+|+..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~ 313 (328)
T cd08226 234 TTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQ 313 (328)
T ss_pred cccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHH
Confidence 0 000001111111223345667999999999999999999999999999986
Q ss_pred hhcc
Q 004195 757 QIQG 760 (769)
Q Consensus 757 ~~~~ 760 (769)
..+.
T Consensus 314 ~~~~ 317 (328)
T cd08226 314 VKEQ 317 (328)
T ss_pred HHHh
Confidence 6544
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=302.35 Aligned_cols=252 Identities=20% Similarity=0.352 Sum_probs=197.3
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC-CCChhHHHHHHHHHhhcc---CCceeeEeeeeeccCCCCCCc
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK-KSSPHMYTYHIELISKLR---HSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~---H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.|+..+.||+|+||.||+|+.. +++.||+|.++... ....+++.+|++++++++ |||+++++++|.+..
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~------ 75 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGP------ 75 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCC------
Confidence 4677889999999999999964 78999999987542 233467889999999997 999999999987533
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+++++|.+++... .+++.....++.|+++||+|||+. +|+||||+|+||++++++.++++|||.+.
T Consensus 76 -~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~ 149 (277)
T cd06917 76 -RLWIIMEYAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAA 149 (277)
T ss_pred -EEEEEEecCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCcee
Confidence 489999999999999998754 689999999999999999999998 99999999999999999999999999986
Q ss_pred hhhccCC--cceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccC
Q 004195 636 LAEARGK--GSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVD 712 (769)
Q Consensus 636 ~~~~~~~--~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 712 (769)
....... ....+...|.+||.... ..++.++|||||||++|||++|++||............. ....
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~----------~~~~ 219 (277)
T cd06917 150 LLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIP----------KSKP 219 (277)
T ss_pred ecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccc----------cCCC
Confidence 5433221 11223345677887654 346899999999999999999999997543221111000 0011
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 713 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
+.+... ....++.+++.+||+.||++||++.|+++|.|+...
T Consensus 220 ~~~~~~---~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~ 261 (277)
T cd06917 220 PRLEDN---GYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAH 261 (277)
T ss_pred CCCCcc---cCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhcc
Confidence 111111 123458899999999999999999999999998654
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=308.03 Aligned_cols=251 Identities=21% Similarity=0.303 Sum_probs=195.4
Q ss_pred CCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC---hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 482 FDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS---PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~---~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
|+..+.||+|+||.||+|+.. ++..||+|.+....... ...+.+|++++++++|||+++++++|.+.. .
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-------~ 99 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREH-------T 99 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC-------e
Confidence 666789999999999999965 68999999987543222 246888999999999999999999997643 3
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.++||||++ |++.+.+......++|.++..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 100 ~~lv~e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~ 175 (317)
T cd06635 100 AWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIA 175 (317)
T ss_pred EEEEEeCCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCcccc
Confidence 799999997 588888765555799999999999999999999998 9999999999999999999999999988654
Q ss_pred hccCCcceeecCCCcchhhhc---cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccccccccccccCc
Q 004195 638 EARGKGSAEVSSPAKKTSVLA---RTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 638 ~~~~~~~~~~~~~~~~pe~~~---~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~ 713 (769)
.... .......|.+||... ...++.++|||||||++|||++|++|+....... ...+.... .+
T Consensus 176 ~~~~--~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~-----------~~ 242 (317)
T cd06635 176 SPAN--SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE-----------SP 242 (317)
T ss_pred CCcc--cccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcc-----------CC
Confidence 3221 122334567788763 4568999999999999999999999886543221 11111100 00
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
. .........+.+++.+||+.+|++||++.++++|+|+.....
T Consensus 243 ~---~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 285 (317)
T cd06635 243 T---LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERP 285 (317)
T ss_pred C---CCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCc
Confidence 0 011123345889999999999999999999999999865543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=301.54 Aligned_cols=247 Identities=18% Similarity=0.223 Sum_probs=195.2
Q ss_pred cccCCceeEEEEEeC-CCcEEEEEEccccCC---CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEEEe
Q 004195 488 MCDASHGQIYKGKLT-DGTLVAIRSLKMSKK---SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFE 563 (769)
Q Consensus 488 iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV~E 563 (769)
||.|++|.||+|+.. +++.||+|.+..... ...+.+.+|++++++++||||+++++++.+.. ..++|||
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-------~~~lv~e 73 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKK-------YIYMLME 73 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCC-------ccEEEEe
Confidence 699999999999976 589999999975432 23467899999999999999999999987643 3899999
Q ss_pred ccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhccC-C
Q 004195 564 YAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARG-K 642 (769)
Q Consensus 564 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~~-~ 642 (769)
|+++++|.+++.+.. .+++..+..++.|++.||+|||+. +++|+||||+||+++.++.+|++|||.+....... .
T Consensus 74 ~~~~~~L~~~l~~~~-~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~ 149 (262)
T cd05572 74 YCLGGELWTILRDRG-LFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKT 149 (262)
T ss_pred cCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccccc
Confidence 999999999998654 589999999999999999999998 99999999999999999999999999987654332 1
Q ss_pred cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccCCCCHH
Q 004195 643 GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDE 722 (769)
Q Consensus 643 ~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 722 (769)
........|++||......++.++||||||+++|||++|+.|+.....+.... ........ ..+ ..+..
T Consensus 150 ~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~~------~~~----~~~~~ 218 (262)
T cd05572 150 WTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEI-YNDILKGN------GKL----EFPNY 218 (262)
T ss_pred ccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHH-HHHHhccC------CCC----CCCcc
Confidence 11223445778888877889999999999999999999999987544211111 11000000 011 11112
Q ss_pred HHHHHHHHHHHcCcCCCCCCCC-----HHHHHHHhHhhh
Q 004195 723 SLKRMMELCLRCLSNEPKDRPS-----VEDTLWNLQFAT 756 (769)
Q Consensus 723 ~~~~l~~li~~cl~~dP~~RPs-----~~evl~~l~~~~ 756 (769)
....+.+++.+||+.+|++||+ ++|+++|+||..
T Consensus 219 ~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~ 257 (262)
T cd05572 219 IDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNG 257 (262)
T ss_pred cCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhC
Confidence 2345899999999999999999 999999999974
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-35 Score=307.14 Aligned_cols=257 Identities=17% Similarity=0.211 Sum_probs=191.9
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC-ChhHHHHHHHHHhhcc-CCceeeEeeeeeccCCCCCCcce
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS-SPHMYTYHIELISKLR-HSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
+|...+.||+|+||.||+++.. +|+.||+|.+...... ....+.+|+.++.++. |+||+++++++.... .
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~-------~ 77 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREG-------D 77 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCC-------c
Confidence 3445678999999999999965 6899999999754322 3456889999999996 999999999987533 3
Q ss_pred EEEEEeccCCCchhhhh---c-CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 558 IYLIFEYAPNETLRSFI---S-GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l---~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
.+++|||++. ++.++. . .....+++..+.+++.++++||+|||+. .+|+||||||+||+++.++.+||+|||+
T Consensus 78 ~~~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~ 154 (288)
T cd06616 78 CWICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIKLCDFGI 154 (288)
T ss_pred EEEEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEEccCCcEEEeecch
Confidence 7899999864 554433 2 2234689999999999999999999963 2899999999999999999999999999
Q ss_pred chhhhccCC-cceeecCCCcchhhhccC---CCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccccc
Q 004195 634 PLLAEARGK-GSAEVSSPAKKTSVLART---EQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKS 709 (769)
Q Consensus 634 a~~~~~~~~-~~~~~~~~~~~pe~~~~~---~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (769)
++....... ....+...|.+||.+... .++.++|||||||++|||++|+.||..... ......+.....
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-~~~~~~~~~~~~------ 227 (288)
T cd06616 155 SGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS-VFDQLTQVVKGD------ 227 (288)
T ss_pred hHHhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch-HHHHHhhhcCCC------
Confidence 865433221 222334567888887665 689999999999999999999999865331 111111110000
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 710 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.+.+........+.++.+++.+||+.+|++|||++||++|+|+..
T Consensus 228 --~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 272 (288)
T cd06616 228 --PPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKD 272 (288)
T ss_pred --CCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhc
Confidence 111111111223445899999999999999999999999999865
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-35 Score=263.22 Aligned_cols=265 Identities=19% Similarity=0.261 Sum_probs=201.3
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC--CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK--SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
+|...+.||+|.||+||||+.. +++.||+|+++..+. .-.....+||.+++.++|+|||+++++......
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkk------- 75 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKK------- 75 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCce-------
Confidence 4556688999999999999955 699999999986543 335678999999999999999999998876443
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
..+|+|||. .+|..+...-...++......++.|+++||.|+|++ .+.|||+||.|.|++.+|+.|++|||+++..
T Consensus 76 ltlvfe~cd-qdlkkyfdslng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglaraf 151 (292)
T KOG0662|consen 76 LTLVFEFCD-QDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAF 151 (292)
T ss_pred eEEeHHHhh-HHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhc
Confidence 899999996 488888875555789999999999999999999999 9999999999999999999999999999765
Q ss_pred hccC--CcceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccc--ccccccc--
Q 004195 638 EARG--KGSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIG--TDEARKS-- 709 (769)
Q Consensus 638 ~~~~--~~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~--~~~~~~~-- 709 (769)
.-.. .....++.-|.+|.++.+. -|++..|+||-|||+.|+.. |+|.|.+...+.....+.+..+ .++.|..
T Consensus 152 gipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t 231 (292)
T KOG0662|consen 152 GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMT 231 (292)
T ss_pred CCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccc
Confidence 4332 2223334445566666554 58999999999999999986 7888877665443333322222 2333332
Q ss_pred -ccCccccCCCCH---------HHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 710 -IVDPAVMNECSD---------ESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 710 -~~d~~~~~~~~~---------~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
+.|....+.++. .....-.+++.+.+.-+|.+|.+++++++|++|..
T Consensus 232 ~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d 288 (292)
T KOG0662|consen 232 KLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSD 288 (292)
T ss_pred cCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCccccc
Confidence 233222222221 11123467888888899999999999999999875
|
|
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=304.09 Aligned_cols=248 Identities=15% Similarity=0.192 Sum_probs=188.4
Q ss_pred ccccCCceeEEEEEeC-CCcEEEEEEccccCCC---ChhHHHHHHH---HHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 487 FMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS---SPHMYTYHIE---LISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 487 ~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~---~~~~~~~Ei~---~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
.||+|+||.||+|+.. +|+.||+|.+...... ....+..|.. .++...||||+++++++.+.+ ..+
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-------~~~ 73 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD-------KLS 73 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCC-------EEE
Confidence 4899999999999965 6899999998754321 1223444443 344457999999999887643 389
Q ss_pred EEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhc
Q 004195 560 LIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEA 639 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~ 639 (769)
+||||+++|+|.+++...+ .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 74 ~v~e~~~g~~L~~~l~~~~-~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~ 149 (278)
T cd05606 74 FILDLMNGGDLHYHLSQHG-VFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSK 149 (278)
T ss_pred EEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCc
Confidence 9999999999999987554 699999999999999999999998 999999999999999999999999999865433
Q ss_pred cCCcceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccCC
Q 004195 640 RGKGSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNE 718 (769)
Q Consensus 640 ~~~~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 718 (769)
.......+...|++||.+... .++.++||||+||++|||++|+.||................ ..++.+...
T Consensus 150 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~--------~~~~~~~~~ 221 (278)
T cd05606 150 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL--------TMAVELPDS 221 (278)
T ss_pred cCCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhh--------ccCCCCCCc
Confidence 322233445567788887643 68999999999999999999999987542111111111000 011222222
Q ss_pred CCHHHHHHHHHHHHHcCcCCCCCCC-----CHHHHHHHhHhhhh
Q 004195 719 CSDESLKRMMELCLRCLSNEPKDRP-----SVEDTLWNLQFATQ 757 (769)
Q Consensus 719 ~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~~~~~ 757 (769)
. ...+.+++.+|+..+|++|| ++.|+++|+|+...
T Consensus 222 ~----s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~ 261 (278)
T cd05606 222 F----SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSL 261 (278)
T ss_pred C----CHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCC
Confidence 2 34588999999999999999 99999999998653
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=302.66 Aligned_cols=251 Identities=23% Similarity=0.356 Sum_probs=193.3
Q ss_pred cCCCCcCccccCCceeEEEEEeC------CCcEEEEEEccccCCC-ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT------DGTLVAIRSLKMSKKS-SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD 552 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~ 552 (769)
++|+....||+|+||.||+|+.+ +.+.||+|.+...... ..+.+.+|++++++++|+||+++++++.+.+.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-- 82 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEP-- 82 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCc--
Confidence 46788899999999999999954 2467999988754332 24678999999999999999999999876433
Q ss_pred CCcceEEEEEeccCCCchhhhhcCCC--------CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc
Q 004195 553 PSISIIYLIFEYAPNETLRSFISGPG--------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF 624 (769)
Q Consensus 553 ~~~~~~~lV~Ey~~~gsL~~~l~~~~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~ 624 (769)
.++||||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++
T Consensus 83 -----~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~ 154 (275)
T cd05046 83 -----HYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQR 154 (275)
T ss_pred -----ceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCC
Confidence 799999999999999997332 1589999999999999999999998 999999999999999999
Q ss_pred eeeecCCCCchhhhccC---CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhc
Q 004195 625 HVKINSYNLPLLAEARG---KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVN 700 (769)
Q Consensus 625 ~~kl~DFGla~~~~~~~---~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~ 700 (769)
.+|++|||+++...... .........|++||...+..++.++|||||||++|||++ |..||..............
T Consensus 155 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~- 233 (275)
T cd05046 155 EVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQA- 233 (275)
T ss_pred cEEEcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHc-
Confidence 99999999985432111 111122334778888777788999999999999999999 7778754332222111110
Q ss_pred cccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 701 IGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 701 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
.. . .......++ ..+.+++.+||+.+|++||++.|++++++
T Consensus 234 -~~---~----~~~~~~~~~----~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 234 -GK---L----ELPVPEGCP----SRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred -CC---c----CCCCCCCCC----HHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 00 0 000111223 34889999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=300.54 Aligned_cols=253 Identities=22% Similarity=0.357 Sum_probs=202.0
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC--CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK--SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
+|...+.||+|++|.||+|... +++.|++|++..... ...+.+.+|++++++++||||+++++++.+.. ...
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~ 75 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEE-----KNT 75 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCC-----CCe
Confidence 4677899999999999999976 789999999976542 33567899999999999999999999987642 134
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.++|+||+++++|.+++.... .+++..+..++.|+++||+|||+. +++|+||+|+||+++.++.+||+|||.+...
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~ 151 (260)
T cd06606 76 LNIFLEYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRL 151 (260)
T ss_pred EEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEec
Confidence 899999999999999998654 799999999999999999999998 9999999999999999999999999998665
Q ss_pred hccC----CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCc
Q 004195 638 EARG----KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 638 ~~~~----~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
.... .........|.+||......++.++||||||+++|||++|+.|+...... ...... ... .
T Consensus 152 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~--~~~---------~ 219 (260)
T cd06606 152 GDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNP-MAALYK--IGS---------S 219 (260)
T ss_pred ccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch-HHHHHh--ccc---------c
Confidence 4433 12233445677888887777999999999999999999999998765411 111111 000 0
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
......+......+.+++.+|++.+|++||++.|+++|+|+
T Consensus 220 ~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 220 GEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred CCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 00111222234558999999999999999999999999985
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-35 Score=307.67 Aligned_cols=264 Identities=23% Similarity=0.382 Sum_probs=197.5
Q ss_pred CCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC--CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 482 FDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK--KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
|+..+.||+|++|.||+|+.. +|+.+|+|++.... ......+.+|++++++++|||++++++++.+.. ....
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~~ 75 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKG-----KGSI 75 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCC-----CCcE
Confidence 566789999999999999976 58999999998653 233456889999999999999999999997641 1348
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
++||||++ ++|.+++......+++..+..++.|+++||+|||+. +++|+||||+||++++++.+|++|||++....
T Consensus 76 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~ 151 (287)
T cd07840 76 YMVFEYMD-HDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYT 151 (287)
T ss_pred EEEecccc-ccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeecc
Confidence 99999997 489998876545799999999999999999999998 99999999999999999999999999986554
Q ss_pred ccC---CcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccc--cccccccccC
Q 004195 639 ARG---KGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIG--TDEARKSIVD 712 (769)
Q Consensus 639 ~~~---~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~d 712 (769)
... .........|.+||.+.+ ..++.++||||||+++|||+||++||...........+..... ....+....+
T Consensus 152 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (287)
T cd07840 152 KRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSK 231 (287)
T ss_pred CCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhcccccc
Confidence 332 122223445777886553 4578999999999999999999999876443221111111110 0000100000
Q ss_pred --------cc------ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 713 --------PA------VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 713 --------~~------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
+. +.......+...+.+++.+||+.+|++||+++++++++|+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 232 LPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred chhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 00 0000011124568999999999999999999999999985
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=307.47 Aligned_cols=273 Identities=19% Similarity=0.302 Sum_probs=199.9
Q ss_pred HHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC--CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCC-
Q 004195 477 EATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK--KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD- 552 (769)
Q Consensus 477 ~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~- 552 (769)
.+.++|+..+.||+|+||.||+|+.. +|+.||+|+++... ......+.+|++++++++||||+++++++.+.....
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 35678899999999999999999976 68999999997543 223356788999999999999999999987643100
Q ss_pred --CCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecC
Q 004195 553 --PSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINS 630 (769)
Q Consensus 553 --~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~D 630 (769)
......++|+||+++ ++.+.+......+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~kl~d 159 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIKLAD 159 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEEeCc
Confidence 012358999999985 77777765545789999999999999999999998 999999999999999999999999
Q ss_pred CCCchhhhccCC---cceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccc--c
Q 004195 631 YNLPLLAEARGK---GSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGT--D 704 (769)
Q Consensus 631 FGla~~~~~~~~---~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~--~ 704 (769)
||.+........ ........|.+||.+.+ ..++.++|||||||++|||++|++||...........+...... .
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (302)
T cd07864 160 FGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCP 239 (302)
T ss_pred ccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCh
Confidence 999865533221 11122345677887654 34689999999999999999999999754322211111111110 1
Q ss_pred ccccccc--------Cc------cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 705 EARKSIV--------DP------AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 705 ~~~~~~~--------d~------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
..+..+. ++ ..... ....+..+.+++.+||+.+|++||++++++.|+|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 240 AVWPDVIKLPYFNTMKPKKQYRRRLREE-FSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred hhcccccccccccccccccccccchhhh-cCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 1111110 00 00000 01123458899999999999999999999999885
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=302.46 Aligned_cols=248 Identities=19% Similarity=0.236 Sum_probs=192.3
Q ss_pred cccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEEEe
Q 004195 488 MCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFE 563 (769)
Q Consensus 488 iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV~E 563 (769)
||+|+||+||+|... +|+.||+|.+.... ....+.+.+|++++++++||||+++++++...+ ..++|||
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-------~~~lv~e 73 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKD-------DLCLVMT 73 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCC-------eEEEEEe
Confidence 689999999999865 68999999987532 222345778999999999999999999887533 3899999
Q ss_pred ccCCCchhhhhcCCC-CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhccCC
Q 004195 564 YAPNETLRSFISGPG-YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGK 642 (769)
Q Consensus 564 y~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~ 642 (769)
|+++++|.+++.+.. ..+++..+..++.|+++||.|||+. +++||||||+||++++++.+|++|||.+........
T Consensus 74 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 150 (277)
T cd05577 74 LMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKK 150 (277)
T ss_pred cCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccCCc
Confidence 999999999987433 3689999999999999999999998 999999999999999999999999999865533211
Q ss_pred -cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccCCCCH
Q 004195 643 -GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSD 721 (769)
Q Consensus 643 -~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 721 (769)
........|.+||...+..++.++|||||||++|||++|+.||...........+...... ........+
T Consensus 151 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~-- 221 (277)
T cd05577 151 IKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE-------MAVEYPDKF-- 221 (277)
T ss_pred cccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccc-------ccccCCccC--
Confidence 1122334567889887778999999999999999999999998654321111111100000 011111222
Q ss_pred HHHHHHHHHHHHcCcCCCCCCC-----CHHHHHHHhHhhh
Q 004195 722 ESLKRMMELCLRCLSNEPKDRP-----SVEDTLWNLQFAT 756 (769)
Q Consensus 722 ~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~~~~ 756 (769)
...+.+++.+||+.+|++|| ++.+++.|+|+..
T Consensus 222 --~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~ 259 (277)
T cd05577 222 --SPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKD 259 (277)
T ss_pred --CHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhc
Confidence 33488999999999999999 8999999999854
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-36 Score=285.19 Aligned_cols=248 Identities=15% Similarity=0.281 Sum_probs=193.9
Q ss_pred cCccccCCceeEEEEEeC-CCcEEEEEEccccCC-CChhHHHHHHHHHhhcc-CCceeeEeeeeeccCCCCCCcceEEEE
Q 004195 485 SSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLR-HSNLVSALGHCLDFSLDDPSISIIYLI 561 (769)
Q Consensus 485 ~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~~~lV 561 (769)
...||.|..|.|++++++ +|...|||.+..... ...+.+...++++.+-+ .|.||+.+|||..+.. +++.
T Consensus 97 l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~d-------V~Ic 169 (391)
T KOG0983|consen 97 LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTD-------VFIC 169 (391)
T ss_pred HHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCch-------HHHH
Confidence 467999999999999976 699999999986532 23356677777776654 8999999999986443 7899
Q ss_pred EeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc-hhhhcc
Q 004195 562 FEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP-LLAEAR 640 (769)
Q Consensus 562 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla-~~~~~~ 640 (769)
||.|. .-...++++-..++++...-++...+++||.||.+. .+|+|||+||+|||+|+.|++|++|||++ ++.+..
T Consensus 170 MelMs-~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeK--H~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSk 246 (391)
T KOG0983|consen 170 MELMS-TCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK 246 (391)
T ss_pred HHHHH-HHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHh--cceeecccCccceEEccCCCEEeecccccceeeccc
Confidence 99994 456677765555788888889999999999999876 38999999999999999999999999999 445544
Q ss_pred CCcceeecCCCcchhhhcc---CCCCCCCCeeehhHHHHHHHhCCCCCCCch--hHHHHhhhhhccccccccccccCccc
Q 004195 641 GKGSAEVSSPAKKTSVLAR---TEQDDKSDVYDIGIILIEIIVGRPITSENV--VVLVKDLLQVNIGTDEARKSIVDPAV 715 (769)
Q Consensus 641 ~~~~~~~~~~~~~pe~~~~---~~~~~ksDVwS~Gvil~elltG~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~~ 715 (769)
......+.++|++||.+.. ..|+.++|||||||.++||+||+.||.... .+....++.. + .|.+
T Consensus 247 AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~----e-------PP~L 315 (391)
T KOG0983|consen 247 AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNE----E-------PPLL 315 (391)
T ss_pred ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhc----C-------CCCC
Confidence 4555667788999887653 468999999999999999999999998733 3333332221 0 1222
Q ss_pred cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 716 MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 716 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
.+. ...+..+.+++..|+.+|+.+||...++++|++..
T Consensus 316 ~~~--~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~ 353 (391)
T KOG0983|consen 316 PGH--MGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIK 353 (391)
T ss_pred Ccc--cCcCHHHHHHHHHHhhcCcccCcchHHHhcCccee
Confidence 211 11344599999999999999999999999999753
|
|
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-35 Score=306.92 Aligned_cols=262 Identities=18% Similarity=0.305 Sum_probs=194.3
Q ss_pred CCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC--CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 482 FDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK--SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
|+..+.||+|++|.||+|+.. +|..||+|++..... ...+.+.+|++++++++|||++++++++.+.+ ..
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~-------~~ 73 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSEN-------KL 73 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCC-------eE
Confidence 567789999999999999975 799999999975432 22356889999999999999999999997643 48
Q ss_pred EEEEeccCCCchhhhhcCCC-CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 559 YLIFEYAPNETLRSFISGPG-YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
++||||++ ++|.+++.... ..+++..+..++.|+++||+|||+. +++||||+|+||+++.++.+||+|||+++..
T Consensus 74 ~iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~ 149 (283)
T cd07835 74 YLVFEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAF 149 (283)
T ss_pred EEEEeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeeccccccc
Confidence 99999995 68999887433 4689999999999999999999998 9999999999999999999999999998654
Q ss_pred hccCC--cceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhccccccc-c-----
Q 004195 638 EARGK--GSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIGTDEA-R----- 707 (769)
Q Consensus 638 ~~~~~--~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~~~~~-~----- 707 (769)
..... ........+.+||.+.+. .++.++|||||||++|||+||++||...... .............+. +
T Consensus 150 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd07835 150 GVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTS 229 (283)
T ss_pred CCCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhh
Confidence 32211 112224456778876543 5689999999999999999999998654321 111111110000000 0
Q ss_pred -cc----cc--CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 708 -KS----IV--DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 708 -~~----~~--d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
.+ .. .........+.....+.+++.+|++.+|++|||++|+++|+||
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 230 LPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred chhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 00 00 0000001111223458899999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=308.45 Aligned_cols=252 Identities=17% Similarity=0.239 Sum_probs=195.3
Q ss_pred CCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCC--CChhHHHHHHHHHhhcc-CCceeeEeeeeeccCCCCCCcce
Q 004195 481 CFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKK--SSPHMYTYHIELISKLR-HSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
.|++.+.||+||.+.||++...+.+.+|+|++..... .....|..|+..|.+++ |.+||++++|-..++ .
T Consensus 362 ~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~-------~ 434 (677)
T KOG0596|consen 362 EYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDG-------Y 434 (677)
T ss_pred hhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCc-------e
Confidence 4778899999999999999988888999998865432 22457999999999995 999999999987644 4
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
+|+||||-+ -||..+|++....++-..++.+..|++.|+.++|++ ||||.||||.|+|+- .|.+||+|||+|..+
T Consensus 435 lYmvmE~Gd-~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI 509 (677)
T KOG0596|consen 435 LYMVMECGD-IDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLV-KGRLKLIDFGIANAI 509 (677)
T ss_pred EEEEeeccc-ccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEE-eeeEEeeeechhccc
Confidence 999999985 599999986554444227788999999999999999 999999999999985 588999999999776
Q ss_pred hccCC----cceeecCCCcchhhhccC-----------CCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccc
Q 004195 638 EARGK----GSAEVSSPAKKTSVLART-----------EQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIG 702 (769)
Q Consensus 638 ~~~~~----~~~~~~~~~~~pe~~~~~-----------~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~ 702 (769)
..... ...+++.-|++||.+... ++++++||||+|||||+|+.|++||...... ..
T Consensus 510 ~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~-~a-------- 580 (677)
T KOG0596|consen 510 QPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQ-IA-------- 580 (677)
T ss_pred CccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHH-HH--------
Confidence 54432 334566778888876432 2578999999999999999999999743211 11
Q ss_pred cccccccccCccccCCCCHH-HHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 703 TDEARKSIVDPAVMNECSDE-SLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 703 ~~~~~~~~~d~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.+..+.||...-+++.- ...++++++..||++||++||++.|+|+|++...
T Consensus 581 ---Kl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~ 632 (677)
T KOG0596|consen 581 ---KLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHPFLQI 632 (677)
T ss_pred ---HHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence 12233444321122210 1112889999999999999999999999998654
|
|
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=300.24 Aligned_cols=247 Identities=18% Similarity=0.309 Sum_probs=181.5
Q ss_pred CccccCCceeEEEEEeCCC---cEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEE
Q 004195 486 SFMCDASHGQIYKGKLTDG---TLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLI 561 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~~g---~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV 561 (769)
+.||+|+||.||+|+..++ ..+++|.+..... ...+.+.+|+.+++.++||||++++++|.+... .++|
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~-------~~lv 73 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIP-------YLLV 73 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCc-------cEEE
Confidence 3699999999999985433 3566777664322 234679999999999999999999999986433 7999
Q ss_pred EeccCCCchhhhhcCC---CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 562 FEYAPNETLRSFISGP---GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 562 ~Ey~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
|||+++|+|.+++++. ....++.....++.||++||+|||+. +++||||||+|||++.++.+||+|||++....
T Consensus 74 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~ 150 (268)
T cd05086 74 FEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRY 150 (268)
T ss_pred EecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccC
Confidence 9999999999999742 23467778889999999999999998 99999999999999999999999999975321
Q ss_pred ccC----CcceeecCCCcchhhhcc-------CCCCCCCCeeehhHHHHHHHh-CCCCCCCchhH-HHHhhhhhcccccc
Q 004195 639 ARG----KGSAEVSSPAKKTSVLAR-------TEQDDKSDVYDIGIILIEIIV-GRPITSENVVV-LVKDLLQVNIGTDE 705 (769)
Q Consensus 639 ~~~----~~~~~~~~~~~~pe~~~~-------~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~-~~~~~~~~~~~~~~ 705 (769)
... .....+...|++||.... ..++.++|||||||++|||++ |.+|+...... ....... +
T Consensus 151 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~------~ 224 (268)
T cd05086 151 KEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIK------D 224 (268)
T ss_pred cchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh------h
Confidence 111 111223345677876532 245789999999999999997 46677543322 2222111 1
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 706 ARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 706 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
......+|.+...+++ .+.+++..|| .+|++||+++||++.+.
T Consensus 225 ~~~~~~~~~~~~~~~~----~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 225 QQVKLFKPQLELPYSE----RWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred cccccCCCccCCCCcH----HHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 1122334444333443 3778888999 67999999999998763
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=305.81 Aligned_cols=250 Identities=18% Similarity=0.302 Sum_probs=196.6
Q ss_pred CccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEEEec
Q 004195 486 SFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEY 564 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV~Ey 564 (769)
..||+|+||.||++... +|+.||||++..........+.+|+.++++++|+||+++++++...+ ..++||||
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-------~~~lv~e~ 98 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD-------ELWVVMEF 98 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCC-------EEEEEEec
Confidence 67999999999999975 78999999986544444567889999999999999999999987643 48999999
Q ss_pred cCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhccCC--
Q 004195 565 APNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGK-- 642 (769)
Q Consensus 565 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~-- 642 (769)
+++++|.+++... .+++.....++.|++.||+|||+. +++||||||+||++++++.++|+|||++........
T Consensus 99 ~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~ 173 (292)
T cd06657 99 LEGGALTDIVTHT--RMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 173 (292)
T ss_pred CCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceecccccccc
Confidence 9999999988643 589999999999999999999998 999999999999999999999999998754432211
Q ss_pred cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccCCCCHH
Q 004195 643 GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDE 722 (769)
Q Consensus 643 ~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 722 (769)
........|.+||...+..++.++|||||||++|||++|++||................ .+.+.. ...
T Consensus 174 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~----------~~~~~~--~~~ 241 (292)
T cd06657 174 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL----------PPKLKN--LHK 241 (292)
T ss_pred cccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhC----------CcccCC--ccc
Confidence 11223345778888877788999999999999999999999986543222211111110 011000 011
Q ss_pred HHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 723 SLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 723 ~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
....+.+++.+||+.+|.+||++.++++|.|+.+...
T Consensus 242 ~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~ 278 (292)
T cd06657 242 VSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 278 (292)
T ss_pred CCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCC
Confidence 2234788999999999999999999999999987653
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=300.08 Aligned_cols=250 Identities=15% Similarity=0.268 Sum_probs=192.0
Q ss_pred CCCCcCccccCCceeEEEEEeCC--CcEEEEEEccccCC----------CChhHHHHHHHHHhh-ccCCceeeEeeeeec
Q 004195 481 CFDSSSFMCDASHGQIYKGKLTD--GTLVAIRSLKMSKK----------SSPHMYTYHIELISK-LRHSNLVSALGHCLD 547 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~~--g~~vAvK~~~~~~~----------~~~~~~~~Ei~~l~~-l~H~nIv~l~~~~~~ 547 (769)
+|+..+.||+|+||.||+|.... ++.+|+|.+..... ....++.+|+.++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47778999999999999999764 78999998864311 112456778888865 799999999999876
Q ss_pred cCCCCCCcceEEEEEeccCCCchhhhhc---CCCCCCCHHHHHHHHHHHHHHhccccc-CCCCCccccCccccceeeCCC
Q 004195 548 FSLDDPSISIIYLIFEYAPNETLRSFIS---GPGYKLTWVQRIAAAIAIVKGVQFLHT-GIVPGVFSNNLKITDVLLDEN 623 (769)
Q Consensus 548 ~~~~~~~~~~~~lV~Ey~~~gsL~~~l~---~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlKp~NILld~~ 623 (769)
.+ ..++||||+++++|.+++. .....+++..+++++.|++.||+|||+ . +++||||||+||+++.+
T Consensus 81 ~~-------~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~i~H~dl~~~nil~~~~ 150 (269)
T cd08528 81 ND-------RLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK---RIVHRDLTPNNIMLGED 150 (269)
T ss_pred CC-------eEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC---ceeecCCCHHHEEECCC
Confidence 43 3899999999999998874 334468999999999999999999996 5 79999999999999999
Q ss_pred ceeeecCCCCchhhhccC-CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccc
Q 004195 624 FHVKINSYNLPLLAEARG-KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIG 702 (769)
Q Consensus 624 ~~~kl~DFGla~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~ 702 (769)
+.+||+|||.+....... .........|.+||...+..++.++||||||+++|||++|++|+...............
T Consensus 151 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~-- 228 (269)
T cd08528 151 DKVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEA-- 228 (269)
T ss_pred CcEEEecccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhc--
Confidence 999999999986544332 11222344577889888888999999999999999999999998754432222111100
Q ss_pred cccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 703 TDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 703 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
...+.....+ ...+.+++.+||+.||++||++.|+..++.
T Consensus 229 -------~~~~~~~~~~----~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 229 -------VYEPLPEGMY----SEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred -------cCCcCCcccC----CHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 0011111122 234889999999999999999999998764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=308.72 Aligned_cols=272 Identities=18% Similarity=0.308 Sum_probs=198.4
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCC-CCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLD-DPS 554 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~-~~~ 554 (769)
.++|+..+.||+|+||.||+|+.. +++.||||++...... ....+.+|++++++++||||+++++++.+.... ...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 468999999999999999999976 6899999998654322 234678899999999999999999988654332 122
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
....++||||+.+ ++...+......+++.++..++.|+++||+|||+. +|+||||||+||++++++.+|++|||++
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~ 162 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADFGLA 162 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcCccc
Confidence 3467999999974 77777765555799999999999999999999998 9999999999999999999999999998
Q ss_pred hhhhccCCc-------------ceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhh
Q 004195 635 LLAEARGKG-------------SAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQV 699 (769)
Q Consensus 635 ~~~~~~~~~-------------~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~ 699 (769)
+........ .......|.+||...+ ..++.++|||||||++|||++|++||.+..... ...+...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~ 242 (311)
T cd07866 163 RPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKL 242 (311)
T ss_pred hhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 654322110 1112334677887654 357899999999999999999999987544322 1111111
Q ss_pred cccccc-c------cccccCccccCCCC-------HHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 700 NIGTDE-A------RKSIVDPAVMNECS-------DESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 700 ~~~~~~-~------~~~~~d~~~~~~~~-------~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
.....+ . .....+.......+ ......+.+++.+|++.||++|||+.|++.|+||
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 243 CGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred hCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 100000 0 00000000000011 1122458899999999999999999999999986
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-34 Score=296.73 Aligned_cols=247 Identities=22% Similarity=0.363 Sum_probs=193.7
Q ss_pred CCCcCccccCCceeEEEEEeCC-----CcEEEEEEccccCCC-ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 482 FDSSSFMCDASHGQIYKGKLTD-----GTLVAIRSLKMSKKS-SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~~-----g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
|+..+.||+|+||.||+|+..+ +..||+|.++..... ..+.+..|++++.+++|+||+++++++.+.+
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~------ 74 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEE------ 74 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC------
Confidence 3456889999999999999753 388999999765433 4568999999999999999999999998643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCC-CCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYK-LTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~-l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
..+++|||+++++|.+++...... +++.++..++.|++.||+|||+. +++||||||+||++++++.++++|||++
T Consensus 75 -~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~ 150 (258)
T smart00219 75 -PLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLS 150 (258)
T ss_pred -eeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCc
Confidence 389999999999999999754433 89999999999999999999999 9999999999999999999999999998
Q ss_pred hhhhccCCcc---eeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccc
Q 004195 635 LLAEARGKGS---AEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSI 710 (769)
Q Consensus 635 ~~~~~~~~~~---~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (769)
+......... ......|.+||......++.++||||+|+++|||++ |++|+...........+....
T Consensus 151 ~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~--------- 221 (258)
T smart00219 151 RDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGY--------- 221 (258)
T ss_pred eecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC---------
Confidence 6554321111 112345677888877789999999999999999999 788886543322222111100
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHh
Q 004195 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNL 752 (769)
Q Consensus 711 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 752 (769)
.+..... .+.++.+++.+|+..+|++|||+.|+++.+
T Consensus 222 -~~~~~~~----~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 222 -RLPKPEN----CPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred -CCCCCCc----CCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 0111112 234588999999999999999999998753
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=304.78 Aligned_cols=266 Identities=17% Similarity=0.286 Sum_probs=194.5
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC--CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK--SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
++|+..+.||+|++|.||+|+.. +|+.||+|.+..... ...+.+.+|++++++++||||+++++++.+..
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------- 74 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK------- 74 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCC-------
Confidence 46888899999999999999976 789999999875432 22356889999999999999999999997643
Q ss_pred eEEEEEeccCCCchhhhhcC-CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC-CceeeecCCCCc
Q 004195 557 IIYLIFEYAPNETLRSFISG-PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE-NFHVKINSYNLP 634 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~-~~~~kl~DFGla 634 (769)
..++||||++ ++|.+++.. ....+++.....++.||+.||+|||+. +++||||||+||+++. ++.+||+|||++
T Consensus 75 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~ 150 (294)
T PLN00009 75 RLYLVFEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLA 150 (294)
T ss_pred eEEEEEeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccc
Confidence 3899999996 578877753 333468888889999999999999998 9999999999999985 567999999998
Q ss_pred hhhhccC--CcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchh-HHHHhhhhhc-ccccccccc
Q 004195 635 LLAEARG--KGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVV-VLVKDLLQVN-IGTDEARKS 709 (769)
Q Consensus 635 ~~~~~~~--~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~-~~~~~~~~~~-~~~~~~~~~ 709 (769)
....... .........|++||.+.+ ..++.++|||||||++|||+||++||..... +......... ......+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (294)
T PLN00009 151 RAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPG 230 (294)
T ss_pred cccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccc
Confidence 6543221 111223445678887655 3578999999999999999999999865432 1221111110 000000000
Q ss_pred cc---C-----ccccC----CCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 710 IV---D-----PAVMN----ECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 710 ~~---d-----~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.. + +.... ...+.....+.+++.+|++.+|++||++.++++|+||..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~ 289 (294)
T PLN00009 231 VTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKD 289 (294)
T ss_pred cccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhH
Confidence 00 0 00000 001122344889999999999999999999999999874
|
|
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=304.38 Aligned_cols=263 Identities=21% Similarity=0.322 Sum_probs=196.1
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC-ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS-SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
+|+..+.||+|++|.||+|+.. +|+.||||+++..... ..+.+.+|++++++++||||+++++++.+.+. .
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~-------~ 73 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENK-------L 73 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCc-------E
Confidence 4788899999999999999976 6899999999765332 34567889999999999999999999986443 7
Q ss_pred EEEEeccCCCchhhhhcCCC--CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 559 YLIFEYAPNETLRSFISGPG--YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
++||||+++ +|.+++.... ..+++..+.+++.|+++||+|||+. +++||||||+||++++++.+|++|||++..
T Consensus 74 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~ 149 (284)
T cd07836 74 MLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARA 149 (284)
T ss_pred EEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhh
Confidence 999999984 8888886432 4689999999999999999999998 999999999999999999999999999865
Q ss_pred hhccCC--cceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhcc-cccccccccc
Q 004195 637 AEARGK--GSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNI-GTDEARKSIV 711 (769)
Q Consensus 637 ~~~~~~--~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~-~~~~~~~~~~ 711 (769)
...... ........|.+||...+ ..++.++|||||||++|||++|++||...... .......... .....+..+.
T Consensus 150 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07836 150 FGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGIS 229 (284)
T ss_pred hcCCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHh
Confidence 432211 11223345677887654 35688999999999999999999998754322 1121111100 0000000000
Q ss_pred C-----cccc-------CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 712 D-----PAVM-------NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 712 d-----~~~~-------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
+ .... ....+.....+.+++.+|++.||++||+++|+++|+||
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 230 QLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred cCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 0 0000 01111234558899999999999999999999999986
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-34 Score=299.13 Aligned_cols=255 Identities=20% Similarity=0.304 Sum_probs=192.1
Q ss_pred CCCcCccccCCceeEEEEEeC----CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 482 FDSSSFMCDASHGQIYKGKLT----DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~----~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
|...+.||+|+||.||+|.+. +++.||||++...... ..+++.+|++++++++||||+++++++......+ ..
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~-~~ 79 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKG-RL 79 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCC-cc
Confidence 556789999999999999853 3688999999754322 2356889999999999999999999886533211 11
Q ss_pred ceEEEEEeccCCCchhhhhcC-----CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecC
Q 004195 556 SIIYLIFEYAPNETLRSFISG-----PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINS 630 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~-----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~D 630 (769)
...++++||+++|+|.+++.. ....+++....+++.|++.||+|||+. +|+||||||+||+++.++.+|++|
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~d 156 (273)
T cd05074 80 PIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVAD 156 (273)
T ss_pred cceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECc
Confidence 235789999999999988741 223578999999999999999999998 999999999999999999999999
Q ss_pred CCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhcccccc
Q 004195 631 YNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDE 705 (769)
Q Consensus 631 FGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 705 (769)
||.++....... ........+++||......++.++|||||||++|||++ |++|+............... .
T Consensus 157 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~----~ 232 (273)
T cd05074 157 FGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKG----N 232 (273)
T ss_pred ccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcC----C
Confidence 999875432211 11111234567888777788999999999999999999 88888654433222211110 0
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 706 ARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 706 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
.......+ ...+.+++.+||+.+|++||++.|+++.+..
T Consensus 233 ------~~~~~~~~----~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~ 271 (273)
T cd05074 233 ------RLKQPPDC----LEDVYELMCQCWSPEPKCRPSFQHLRDQLEL 271 (273)
T ss_pred ------cCCCCCCC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 00111122 2358999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=305.80 Aligned_cols=269 Identities=20% Similarity=0.294 Sum_probs=195.3
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC--CChhHHHHHHHHHhhcc-CCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK--SSPHMYTYHIELISKLR-HSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|+..+.||+|+||.||+|+.. +|+.||+|.++.... .....+.+|+.++++++ ||||+++++++...+.. ..
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~--~~ 78 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKN--GK 78 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCC--CC
Confidence 46888999999999999999975 689999999875432 23357888999999995 69999999988754321 12
Q ss_pred ceEEEEEeccCCCchhhhhcCC----CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC-CceeeecC
Q 004195 556 SIIYLIFEYAPNETLRSFISGP----GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE-NFHVKINS 630 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~-~~~~kl~D 630 (769)
...++||||+++ +|.+++... ...+++..+..++.||++||+|||+. +|+||||||+||+++. ++.+||+|
T Consensus 79 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~d 154 (295)
T cd07837 79 PSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIAD 154 (295)
T ss_pred ceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEee
Confidence 347999999985 888887622 24689999999999999999999998 9999999999999998 89999999
Q ss_pred CCCchhhhccC--CcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhc-ccccc
Q 004195 631 YNLPLLAEARG--KGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVN-IGTDE 705 (769)
Q Consensus 631 FGla~~~~~~~--~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~-~~~~~ 705 (769)
||+++...... .........|.+||.+.+ ..++.++|||||||++|||+||++||...... ......... .....
T Consensus 155 fg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (295)
T cd07837 155 LGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQ 234 (295)
T ss_pred cccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence 99986442211 111122345677887654 45799999999999999999999998654321 111111100 00000
Q ss_pred ccccccC-------ccc----cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 706 ARKSIVD-------PAV----MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 706 ~~~~~~d-------~~~----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
.+....+ +.. .....+....++.+++.+||+.||++||+++|++.|+|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~ 294 (295)
T cd07837 235 VWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYF 294 (295)
T ss_pred hCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCc
Confidence 0000000 000 000011234558899999999999999999999999996
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-34 Score=309.52 Aligned_cols=279 Identities=16% Similarity=0.247 Sum_probs=201.7
Q ss_pred HHHHHHH----hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC--CChhHHHHHHHHHhhccCCceeeEeee
Q 004195 472 LDELKEA----TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK--SSPHMYTYHIELISKLRHSNLVSALGH 544 (769)
Q Consensus 472 ~~el~~~----t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~ 544 (769)
.+|+.++ .++|...+.||+|+||.||+|+.. +|+.||||++..... .....+.+|++++++++||||++++++
T Consensus 3 ~~~~~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~ 82 (342)
T cd07879 3 REEVNKTVWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDV 82 (342)
T ss_pred hhhhhhhhhccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhhe
Confidence 3444444 378999999999999999999965 699999999875322 223568899999999999999999999
Q ss_pred eeccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc
Q 004195 545 CLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF 624 (769)
Q Consensus 545 ~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~ 624 (769)
+...... ......++|+||+. .+|.++.. ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++
T Consensus 83 ~~~~~~~-~~~~~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~ 154 (342)
T cd07879 83 FTSAVSG-DEFQDFYLVMPYMQ-TDLQKIMG---HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDC 154 (342)
T ss_pred ecccccC-CCCceEEEEecccc-cCHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCC
Confidence 8754321 11234799999996 47777653 2589999999999999999999998 999999999999999999
Q ss_pred eeeecCCCCchhhhccCCcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhccc
Q 004195 625 HVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIG 702 (769)
Q Consensus 625 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~ 702 (769)
.+|++|||+++...... ........|++||.... ..++.++|||||||++|||++|+.||...... .........-.
T Consensus 155 ~~kL~dfg~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~ 233 (342)
T cd07879 155 ELKILDFGLARHADAEM-TGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGV 233 (342)
T ss_pred CEEEeeCCCCcCCCCCC-CCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence 99999999986543222 12223445678887655 45899999999999999999999999764322 22221111000
Q ss_pred ccccccccc-C----------ccccCC----CCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 703 TDEARKSIV-D----------PAVMNE----CSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 703 ~~~~~~~~~-d----------~~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
......+.. + +..... ..+.....+.+++.+||+.||++||+++|++.|+||..-.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 234 PGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred CCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 000000000 0 000000 00112345889999999999999999999999999976543
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-35 Score=300.86 Aligned_cols=267 Identities=17% Similarity=0.269 Sum_probs=194.0
Q ss_pred cCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhh--ccCCceeeEeeeeeccCCCCCCcceEEEEE
Q 004195 485 SSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISK--LRHSNLVSALGHCLDFSLDDPSISIIYLIF 562 (769)
Q Consensus 485 ~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~--l~H~nIv~l~~~~~~~~~~~~~~~~~~lV~ 562 (769)
.++||+|+||.||||.+. ++.||||++... ..+.|..|-+|.+. ++|+||++++++-.....+ ...++||+
T Consensus 215 ~eli~~Grfg~V~KaqL~-~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~---~~eywLVt 287 (534)
T KOG3653|consen 215 LELIGRGRFGCVWKAQLD-NRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTAD---RMEYWLVT 287 (534)
T ss_pred HHHhhcCccceeehhhcc-CceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCcc---ccceeEEe
Confidence 478999999999999986 589999999854 45678888887765 5899999999876543321 33589999
Q ss_pred eccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCC------CCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 563 EYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGI------VPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 563 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
||.++|+|.++|+.+ .++|....+|+..+++||+|||+.. +|+|+|||||++|||+..|+++.|+|||+|..
T Consensus 288 ~fh~kGsL~dyL~~n--tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~ 365 (534)
T KOG3653|consen 288 EFHPKGSLCDYLKAN--TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALR 365 (534)
T ss_pred eeccCCcHHHHHHhc--cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEE
Confidence 999999999999876 5999999999999999999999853 67899999999999999999999999999966
Q ss_pred hhccC----CcceeecCCCcchhhhccCC-CC-----CCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccc
Q 004195 637 AEARG----KGSAEVSSPAKKTSVLARTE-QD-----DKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEA 706 (769)
Q Consensus 637 ~~~~~----~~~~~~~~~~~~pe~~~~~~-~~-----~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (769)
..... .....++..||+||++.+.. +. .+.||||+|.|||||+++....+......+.--.+..++..+.
T Consensus 366 ~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt 445 (534)
T KOG3653|consen 366 LEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPT 445 (534)
T ss_pred ecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCC
Confidence 54332 23356778899999875432 22 3689999999999999976433211000000000001111110
Q ss_pred cc----cccCccccCCCCH-----HHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcc
Q 004195 707 RK----SIVDPAVMNECSD-----ESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQG 760 (769)
Q Consensus 707 ~~----~~~d~~~~~~~~~-----~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~ 760 (769)
.. -++....++.+++ ..+.-+.+.+..||..||+.|.|+.=|-+..+......+
T Consensus 446 ~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~ 508 (534)
T KOG3653|consen 446 LEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE 508 (534)
T ss_pred HHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence 00 0111111122222 335568899999999999999999999988887655543
|
|
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=311.85 Aligned_cols=272 Identities=18% Similarity=0.293 Sum_probs=199.6
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
+++|+..+.||+|+||.||+|+.. +|+.||||.+..... .....+.+|+.++++++||||+++++++...... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--~~~ 81 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFE--SFN 81 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeeccccc--ccc
Confidence 568999999999999999999965 789999999864322 2345678899999999999999999988654321 234
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++|+||++ ++|.+.+... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 82 ~~~lv~e~~~-~~l~~~~~~~--~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~ 155 (336)
T cd07849 82 DVYIVQELME-TDLYKLIKTQ--HLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLARI 155 (336)
T ss_pred eEEEEehhcc-cCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccceee
Confidence 5799999997 5888877643 589999999999999999999999 999999999999999999999999999865
Q ss_pred hhccCC-----cceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccc--cccccc
Q 004195 637 AEARGK-----GSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIG--TDEARK 708 (769)
Q Consensus 637 ~~~~~~-----~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~--~~~~~~ 708 (769)
...... ....++..|++||.+.+ ..++.++|||||||++|||+||++||...........+..... ..+.+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (336)
T cd07849 156 ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLN 235 (336)
T ss_pred ccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHH
Confidence 432211 11123345678887644 4689999999999999999999999865432211111111011 001111
Q ss_pred cccCccc---------cCC-----CCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 709 SIVDPAV---------MNE-----CSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 709 ~~~d~~~---------~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
.+.+... ... ..+....++.+++.+||+.+|++|||+.|+++|+|+..-.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~ 299 (336)
T cd07849 236 CIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH 299 (336)
T ss_pred HhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence 1110000 000 0011234588999999999999999999999999987543
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-35 Score=296.12 Aligned_cols=252 Identities=18% Similarity=0.244 Sum_probs=200.5
Q ss_pred CCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC---ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 482 FDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS---SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~---~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
|+..+.||+|.-|+||.++++ ++..+|+|++.+.... ...+.+.|-+||+.++||.++.||+.+.....
T Consensus 79 f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~------- 151 (459)
T KOG0610|consen 79 FRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKY------- 151 (459)
T ss_pred HHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccce-------
Confidence 444588999999999999987 4689999999866432 23457779999999999999999999987554
Q ss_pred EEEEEeccCCCchhhhhc-CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 558 IYLIFEYAPNETLRSFIS-GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
.++|||||+||+|+.+.+ +++..+++..++-+|.+|+-||+|||-. |||.|||||+|||+.++|++.++||.++..
T Consensus 152 ~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~ 228 (459)
T KOG0610|consen 152 SCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLR 228 (459)
T ss_pred eEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeecccccc
Confidence 899999999999999987 5566899999999999999999999999 999999999999999999999999998732
Q ss_pred hhc---------------------------------cCC-------------------------cceeecCCCcchhhhc
Q 004195 637 AEA---------------------------------RGK-------------------------GSAEVSSPAKKTSVLA 658 (769)
Q Consensus 637 ~~~---------------------------------~~~-------------------------~~~~~~~~~~~pe~~~ 658 (769)
... ... ....++.-|.+||++.
T Consensus 229 ~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~ 308 (459)
T KOG0610|consen 229 CPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIR 308 (459)
T ss_pred CCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeee
Confidence 110 000 0011233456688888
Q ss_pred cCCCCCCCCeeehhHHHHHHHhCCCCCCCch-hHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcC
Q 004195 659 RTEQDDKSDVYDIGIILIEIIVGRPITSENV-VVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSN 737 (769)
Q Consensus 659 ~~~~~~ksDVwS~Gvil~elltG~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~ 737 (769)
+..-+.++|.|+|||.+|||+.|+.||.+.. .+.+..++..... +. +. ++.+..+.+||++.|.+
T Consensus 309 G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~------------Fp-~~-~~vs~~akDLIr~LLvK 374 (459)
T KOG0610|consen 309 GEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLK------------FP-EE-PEVSSAAKDLIRKLLVK 374 (459)
T ss_pred cCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCc------------CC-CC-CcchhHHHHHHHHHhcc
Confidence 8888999999999999999999999997654 3344443322111 11 11 13455689999999999
Q ss_pred CCCCCCC----HHHHHHHhHhhhh
Q 004195 738 EPKDRPS----VEDTLWNLQFATQ 757 (769)
Q Consensus 738 dP~~RPs----~~evl~~l~~~~~ 757 (769)
||.+|.- +.||-+|++|..-
T Consensus 375 dP~kRlg~~rGA~eIK~HpFF~gV 398 (459)
T KOG0610|consen 375 DPSKRLGSKRGAAEIKRHPFFEGV 398 (459)
T ss_pred ChhhhhccccchHHhhcCccccCC
Confidence 9999998 9999999998654
|
|
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=310.34 Aligned_cols=270 Identities=18% Similarity=0.263 Sum_probs=200.3
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC--CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK--KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.++|...+.||+|+||+||+|+.. +|+.||||.++... ......+.+|+.+++.++|+||+++++++..... ...
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~--~~~ 81 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHR--EAF 81 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccc--ccc
Confidence 457888999999999999999965 68999999987532 2234567789999999999999999998865332 112
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
...++||||+. ++|.+++...+ .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++
T Consensus 82 ~~~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~ 156 (337)
T cd07858 82 NDVYIVYELMD-TDLHQIIRSSQ-TLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLAR 156 (337)
T ss_pred CcEEEEEeCCC-CCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCcccc
Confidence 34799999996 68998887554 699999999999999999999998 99999999999999999999999999987
Q ss_pred hhhccC--CcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccc--cccccccc
Q 004195 636 LAEARG--KGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIG--TDEARKSI 710 (769)
Q Consensus 636 ~~~~~~--~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~ 710 (769)
...... ......+..|++||.+.. ..++.++|||||||++|||++|++||................+ ..+.+..+
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (337)
T cd07858 157 TTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFI 236 (337)
T ss_pred ccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhc
Confidence 553321 112223455778887654 4689999999999999999999999865432111111110000 00000000
Q ss_pred c---------------CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 711 V---------------DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 711 ~---------------d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
. ++... ...+.....+.+++.+||+.+|++|||++|+++|+|+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~ 296 (337)
T cd07858 237 RNEKARRYIRSLPYTPRQSFA-RLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLAS 296 (337)
T ss_pred CchhhhHHHHhcCcccccCHH-HHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhh
Confidence 0 00000 011123455889999999999999999999999999865
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-34 Score=298.83 Aligned_cols=253 Identities=15% Similarity=0.169 Sum_probs=193.3
Q ss_pred HHHHHHHhcCCCCcCcc--ccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhc-cCCceeeEeeeeec
Q 004195 472 LDELKEATDCFDSSSFM--CDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKL-RHSNLVSALGHCLD 547 (769)
Q Consensus 472 ~~el~~~t~~f~~~~~i--G~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~ 547 (769)
..++....++|+..+.+ |+|+||.||+++.+ ++..+|+|.+....... . |+.....+ +||||+++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~---~--e~~~~~~~~~h~~iv~~~~~~~~ 80 (267)
T PHA03390 6 LSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA---I--EPMVHQLMKDNPNFIKLYYSVTT 80 (267)
T ss_pred HHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch---h--hHHHHHHhhcCCCEEEEEEEEec
Confidence 44555666777777776 99999999999965 68899999987542221 1 22222222 69999999999986
Q ss_pred cCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc-ee
Q 004195 548 FSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF-HV 626 (769)
Q Consensus 548 ~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~-~~ 626 (769)
.+ ..++||||+++|+|.+++.... .++|.++..++.|+++||+|||+. +++||||||+||+++.++ .+
T Consensus 81 ~~-------~~~iv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~ 149 (267)
T PHA03390 81 LK-------GHVLIMDYIKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRI 149 (267)
T ss_pred CC-------eeEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeE
Confidence 44 3899999999999999998654 799999999999999999999998 999999999999999988 99
Q ss_pred eecCCCCchhhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHH--Hhhhhhccccc
Q 004195 627 KINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLV--KDLLQVNIGTD 704 (769)
Q Consensus 627 kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~--~~~~~~~~~~~ 704 (769)
+|+|||+++...... .......|++||...+..++.++|||||||++|||++|+.||........ ..+.... ..
T Consensus 150 ~l~dfg~~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~- 225 (267)
T PHA03390 150 YLCDYGLCKIIGTPS--CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QK- 225 (267)
T ss_pred EEecCccceecCCCc--cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-cc-
Confidence 999999986543221 22334567789988888899999999999999999999999874332211 1111110 00
Q ss_pred cccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCC-HHHHHHHhHhh
Q 004195 705 EARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPS-VEDTLWNLQFA 755 (769)
Q Consensus 705 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~~l~~~ 755 (769)
... ..+.....+.+++.+||+.+|.+||+ ++|+++|+|+.
T Consensus 226 -------~~~----~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~ 266 (267)
T PHA03390 226 -------KLP----FIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLK 266 (267)
T ss_pred -------cCC----cccccCHHHHHHHHHHhccChhhCCchHHHHhcCCccc
Confidence 001 11123344899999999999999996 69999999975
|
|
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=308.88 Aligned_cols=246 Identities=20% Similarity=0.255 Sum_probs=198.8
Q ss_pred cCccccCCceeEEEEEeC--CCc--EEEEEEccccCCC-ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 485 SSFMCDASHGQIYKGKLT--DGT--LVAIRSLKMSKKS-SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 485 ~~~iG~G~~g~Vy~~~~~--~g~--~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
.++||+|.||.|++|.+. .|+ .||||.++..... ...+|.+|+.+|.+|+|||+|+|||+..+.- ..
T Consensus 115 ~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~qp--------~m 186 (1039)
T KOG0199|consen 115 YELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQP--------AM 186 (1039)
T ss_pred HHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccch--------hh
Confidence 378999999999999976 354 6899999876544 4578999999999999999999999998622 68
Q ss_pred EEEeccCCCchhhhhcC-CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 560 LIFEYAPNETLRSFISG-PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
+|||.++.|+|.+.|++ ....+-......++.|||.|++||..+ ++|||||-.+|+|+-..-.+||+|||+.+...
T Consensus 187 MV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg 263 (1039)
T KOG0199|consen 187 MVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALG 263 (1039)
T ss_pred HHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccC
Confidence 99999999999999985 445678888999999999999999999 99999999999999999999999999987765
Q ss_pred ccCCcce-----eecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccC
Q 004195 639 ARGKGSA-----EVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVD 712 (769)
Q Consensus 639 ~~~~~~~-----~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 712 (769)
....... .....|++||.+....++-++|||+|||++|||+| |..||.+.....+.+.+ |
T Consensus 264 ~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~i--------------D 329 (1039)
T KOG0199|consen 264 ENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNI--------------D 329 (1039)
T ss_pred CCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhc--------------c
Confidence 4433221 22345678999999999999999999999999999 67888765443333322 1
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 713 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
..-+-..++.+++++.+++..||..+|++|||+..|.+.....
T Consensus 330 ~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l~ 372 (1039)
T KOG0199|consen 330 AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVLA 372 (1039)
T ss_pred ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHHH
Confidence 1111223445566799999999999999999999998665443
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=321.05 Aligned_cols=245 Identities=19% Similarity=0.273 Sum_probs=202.1
Q ss_pred CcCccccCCceeEEEEEe-CCC----cEEEEEEccccC-CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 484 SSSFMCDASHGQIYKGKL-TDG----TLVAIRSLKMSK-KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 484 ~~~~iG~G~~g~Vy~~~~-~~g----~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
..++||+|+||+||||.+ +.| .+||+|++.... .+...++..|+-+|.+++|||+++++|+|..+.
T Consensus 700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-------- 771 (1177)
T KOG1025|consen 700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-------- 771 (1177)
T ss_pred hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch--------
Confidence 468999999999999985 444 478999987553 334578999999999999999999999998643
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
..||++|||.|.|.++++.+...+--...+.|..|||+|+.|||.+ ++|||||-.+|||+..-..+||.|||+++..
T Consensus 772 ~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll 848 (1177)
T KOG1025|consen 772 LQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLL 848 (1177)
T ss_pred HHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhcc
Confidence 6899999999999999997777888999999999999999999999 9999999999999999999999999999887
Q ss_pred hccCCcce----eecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccC
Q 004195 638 EARGKGSA----EVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVD 712 (769)
Q Consensus 638 ~~~~~~~~----~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 712 (769)
........ .+...|++-|.+....|+.++|||||||++||++| |..|++....+.+..+++..-
T Consensus 849 ~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~ge----------- 917 (1177)
T KOG1025|consen 849 APDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGE----------- 917 (1177)
T ss_pred CcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccc-----------
Confidence 55443221 23345566677778899999999999999999999 889998776666655544211
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 713 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
+-..++.+..++..++.+||..|++.||+++++.....
T Consensus 918 ---RLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs 955 (1177)
T KOG1025|consen 918 ---RLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFS 955 (1177)
T ss_pred ---cCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHH
Confidence 12334455556888999999999999999999887654
|
|
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=310.88 Aligned_cols=273 Identities=19% Similarity=0.258 Sum_probs=204.6
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC--CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK--KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
+|...+.||+|++|.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+... .....
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~--~~~~~ 78 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSP--EDFND 78 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCc--ccccc
Confidence 4778899999999999999976 58999999997643 2334678999999999999999999999876432 12345
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.++||||++ ++|.+++.+.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.++|+|||++...
T Consensus 79 ~~lv~e~~~-~~l~~~l~~~~-~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~~ 153 (330)
T cd07834 79 VYIVTELME-TDLHKVIKSPQ-PLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARGV 153 (330)
T ss_pred eEEEecchh-hhHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEee
Confidence 899999997 58999987654 799999999999999999999998 9999999999999999999999999998655
Q ss_pred hccC-----CcceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccc--cccc-
Q 004195 638 EARG-----KGSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTD--EARK- 708 (769)
Q Consensus 638 ~~~~-----~~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~--~~~~- 708 (769)
.... ......+..|.+||.+.+. .++.++||||||+++|+|++|++||...........+....+.. ..+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 233 (330)
T cd07834 154 DPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKF 233 (330)
T ss_pred cccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhh
Confidence 4332 1122234456788887776 78999999999999999999999997644322111111111100 0000
Q ss_pred -------cccC---cc---ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcc
Q 004195 709 -------SIVD---PA---VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQG 760 (769)
Q Consensus 709 -------~~~d---~~---~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~ 760 (769)
+.+. .. -.....+.....+.+++.+||+.+|++||++++++.|+|+......
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~ 298 (330)
T cd07834 234 ITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDP 298 (330)
T ss_pred ccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccc
Confidence 0000 00 0000111234458899999999999999999999999999865443
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-35 Score=299.93 Aligned_cols=259 Identities=19% Similarity=0.285 Sum_probs=195.5
Q ss_pred CCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhh--ccCCceeeEeeeeeccCCCCCCcceE
Q 004195 481 CFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISK--LRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~--l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
.....+.||+|.||.||+|+++ |+.||||++... ++..+.+|.+|.+. +||+||..+++.= ..++..-..+
T Consensus 212 qI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFIaaD---~~~~gs~TQL 284 (513)
T KOG2052|consen 212 QIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFIAAD---NKDNGSWTQL 284 (513)
T ss_pred eeEEEEEecCccccceeecccc-CCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhhhcc---ccCCCceEEE
Confidence 3455789999999999999996 889999999743 45678999999875 4999999888752 2333345779
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccC-----CCCCccccCccccceeeCCCceeeecCCCC
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTG-----IVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-----~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
+||.||-+.|||+|+|.+. .++-...++++..+|.||++||.. .+|.|.|||||+.|||+..++.+.|+|+|+
T Consensus 285 wLvTdYHe~GSL~DyL~r~--tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGL 362 (513)
T KOG2052|consen 285 WLVTDYHEHGSLYDYLNRN--TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 362 (513)
T ss_pred EEeeecccCCcHHHHHhhc--cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeecee
Confidence 9999999999999999874 689999999999999999999975 368899999999999999999999999999
Q ss_pred chhhhcc------CCcceeecCCCcchhhhccCC----C--CCCCCeeehhHHHHHHHhC----------CCCCCCch--
Q 004195 634 PLLAEAR------GKGSAEVSSPAKKTSVLARTE----Q--DDKSDVYDIGIILIEIIVG----------RPITSENV-- 689 (769)
Q Consensus 634 a~~~~~~------~~~~~~~~~~~~~pe~~~~~~----~--~~ksDVwS~Gvil~elltG----------~~p~~~~~-- 689 (769)
|...... ......++..|++||++...- + -..+||||||.|+||++-+ ++||.+-.
T Consensus 363 Av~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~ 442 (513)
T KOG2052|consen 363 AVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPS 442 (513)
T ss_pred eEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCC
Confidence 9543222 123445677889999875331 1 2369999999999999753 24554311
Q ss_pred ---hHHHHhhhhhccccccccccccCccccCC-CCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 690 ---VVLVKDLLQVNIGTDEARKSIVDPAVMNE-CSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 690 ---~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.+...+.+ -.+-+.|.+... .+.+.+..+.++|+.||..+|..|-|+--|-+.+....+
T Consensus 443 DPs~eeMrkVV---------Cv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 443 DPSFEEMRKVV---------CVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred CCCHHHHhcce---------eecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 11111100 001122333222 234678889999999999999999999888887766553
|
|
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-34 Score=307.88 Aligned_cols=270 Identities=19% Similarity=0.288 Sum_probs=197.8
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC--CCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCC
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK--KSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~ 553 (769)
..++|+..+.||+|+||.||+|... +|+.||||++.... ......+.+|+.+++++ +||||++++++|...+
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~---- 80 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAEN---- 80 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCC----
Confidence 4567888899999999999999976 68899999986432 22335677899999999 9999999999986532
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
....++||||++ ++|.+++... .++|..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 81 -~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~ 153 (337)
T cd07852 81 -DKDIYLVFEYME-TDLHAVIRAN--ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGL 153 (337)
T ss_pred -CceEEEEecccc-cCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccc
Confidence 234799999997 5999988754 689999999999999999999998 999999999999999999999999999
Q ss_pred chhhhccCC-------cceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhccc-c
Q 004195 634 PLLAEARGK-------GSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIG-T 703 (769)
Q Consensus 634 a~~~~~~~~-------~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~-~ 703 (769)
++....... .....+..|++||.+.. ..++.++|||||||++|||+||++||...... .........-. .
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 233 (337)
T cd07852 154 ARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPS 233 (337)
T ss_pred hhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 865432221 11123345677886644 45789999999999999999999998653321 11111111000 0
Q ss_pred ccc--------cccccC----ccc--cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 704 DEA--------RKSIVD----PAV--MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 704 ~~~--------~~~~~d----~~~--~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
... ...+.+ ... .....+....++.+++.+||+.||++|||+.++++|+|+..-.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~ 302 (337)
T cd07852 234 AEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFH 302 (337)
T ss_pred HHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhc
Confidence 000 000000 000 0000111234588999999999999999999999999987543
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-34 Score=295.38 Aligned_cols=248 Identities=19% Similarity=0.221 Sum_probs=188.2
Q ss_pred CccccCCceeEEEEEeC-CCcEEEEEEccccCCCC---hhHHHHHHHHH-hhccCCceeeEeeeeeccCCCCCCcceEEE
Q 004195 486 SFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS---PHMYTYHIELI-SKLRHSNLVSALGHCLDFSLDDPSISIIYL 560 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~---~~~~~~Ei~~l-~~l~H~nIv~l~~~~~~~~~~~~~~~~~~l 560 (769)
+.||+|+||.||+|+.. +|+.||||.++...... ...+..|..++ ...+|+||+++++++.+.+ ..++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~-------~~~l 74 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKD-------YLYL 74 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCC-------eEEE
Confidence 56899999999999975 68999999987543211 22344555544 4458999999999997643 4899
Q ss_pred EEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhcc
Q 004195 561 IFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEAR 640 (769)
Q Consensus 561 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~ 640 (769)
||||+++++|.+++...+ .+++..+..++.|++.||.|||+. +++||||||+||++++++.+||+|||+++.....
T Consensus 75 v~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 150 (260)
T cd05611 75 VMEYLNGGDCASLIKTLG-GLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLEN 150 (260)
T ss_pred EEeccCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceecccc
Confidence 999999999999997544 689999999999999999999998 9999999999999999999999999998654321
Q ss_pred CCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccCCCC
Q 004195 641 GKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECS 720 (769)
Q Consensus 641 ~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 720 (769)
........|.+||...+..++.++||||||+++|||+||++||............... . .. ..+.....+
T Consensus 151 --~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~-~~----~~~~~~~~~- 220 (260)
T cd05611 151 --KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSR--R-IN----WPEEVKEFC- 220 (260)
T ss_pred --ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc--c-cC----CCCcccccC-
Confidence 1122334567788887777899999999999999999999999765433221111100 0 00 011111122
Q ss_pred HHHHHHHHHHHHHcCcCCCCCCC---CHHHHHHHhHhhhh
Q 004195 721 DESLKRMMELCLRCLSNEPKDRP---SVEDTLWNLQFATQ 757 (769)
Q Consensus 721 ~~~~~~l~~li~~cl~~dP~~RP---s~~evl~~l~~~~~ 757 (769)
...+.+++.+||+.+|++|| +++|++.|+|+...
T Consensus 221 ---~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~ 257 (260)
T cd05611 221 ---SPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSI 257 (260)
T ss_pred ---CHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcC
Confidence 33489999999999999999 45799999998653
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=308.51 Aligned_cols=256 Identities=16% Similarity=0.244 Sum_probs=208.5
Q ss_pred HHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 477 EATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 477 ~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
..+..|.+...||+|.|+.|..|++. +|..||||.+++..... ...+.+|+++|+.++|||||+++.+.....
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~---- 128 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEA---- 128 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecc----
Confidence 34567888999999999999999976 69999999998764332 245889999999999999999999988643
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
.+|+||||+.+|.+++++.+++. +.......++.|+.+|++|+|++ .|||||||.+|||||.++++||+|||+
T Consensus 129 ---~lylV~eya~~ge~~~yl~~~gr-~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgf 201 (596)
T KOG0586|consen 129 ---TLYLVMEYASGGELFDYLVKHGR-MKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGF 201 (596)
T ss_pred ---eeEEEEEeccCchhHHHHHhccc-chhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeecccc
Confidence 38999999999999999998774 55588889999999999999999 999999999999999999999999999
Q ss_pred chhhhccC-CcceeecCCCcchhhhccCCC-CCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccccccc
Q 004195 634 PLLAEARG-KGSAEVSSPAKKTSVLARTEQ-DDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIV 711 (769)
Q Consensus 634 a~~~~~~~-~~~~~~~~~~~~pe~~~~~~~-~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (769)
+....... ..+.++..+|.+||.+.+.+| ++++|+||+||++|-|+.|..||++......+..+. .+ .+
T Consensus 202 S~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl--~g------k~- 272 (596)
T KOG0586|consen 202 STFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVL--RG------KY- 272 (596)
T ss_pred ceeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchhe--ee------ee-
Confidence 97665433 345677788999999988877 789999999999999999999998754332222110 00 00
Q ss_pred CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 712 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
+ .+--...+..+++++++..+|.+|++++++.+|-|.....
T Consensus 273 --r----Ip~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~ 313 (596)
T KOG0586|consen 273 --R----IPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLL 313 (596)
T ss_pred --c----ccceeechhHHHHHHhhccCccccCCHHHhhhhcccchhh
Confidence 0 0111122367899999999999999999999999976443
|
|
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-34 Score=296.16 Aligned_cols=249 Identities=20% Similarity=0.230 Sum_probs=200.0
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC--CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK--SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
+|+..+.||+|+||.||+++.. +++.+|+|.+..... .....+.+|++++++++|+||+++++++.+.. .
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-------~ 73 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGN-------K 73 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCC-------E
Confidence 4778899999999999999865 788999999875432 22456788999999999999999999887643 4
Q ss_pred EEEEEeccCCCchhhhhcC---CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 558 IYLIFEYAPNETLRSFISG---PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
.++||||+++++|.+++.+ ....+++..+..++.|+++||+|||+. +++||||||+||++++++.+|++|||++
T Consensus 74 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~ 150 (256)
T cd08530 74 LCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGIS 150 (256)
T ss_pred EEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccch
Confidence 8999999999999999863 234689999999999999999999998 9999999999999999999999999999
Q ss_pred hhhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCcc
Q 004195 635 LLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
+...............+.+||...+..++.++||||||+++|||++|+.|+.............. .
T Consensus 151 ~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~--------------~ 216 (256)
T cd08530 151 KVLKKNMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQR--------------G 216 (256)
T ss_pred hhhccCCcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc--------------C
Confidence 76654432223334456788888888889999999999999999999999976543322221110 0
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
.....+.....++.+++.+|++.+|++||++.|+++|+.
T Consensus 217 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~ 255 (256)
T cd08530 217 KYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPA 255 (256)
T ss_pred CCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCC
Confidence 001122234455899999999999999999999999874
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-34 Score=309.73 Aligned_cols=282 Identities=16% Similarity=0.209 Sum_probs=207.1
Q ss_pred cccCHHHHHHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC--CChhHHHHHHHHHhhccCCceeeEeee
Q 004195 468 RTFTLDELKEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK--SSPHMYTYHIELISKLRHSNLVSALGH 544 (769)
Q Consensus 468 ~~~~~~el~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~ 544 (769)
++....++..++++|...+.||+|+||.||+|... +|+.||+|++..... ...+.+.+|++++++++||||++++++
T Consensus 5 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~ 84 (345)
T cd07877 5 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 84 (345)
T ss_pred hhhHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeee
Confidence 45566788889999999999999999999999864 789999999975322 223567889999999999999999998
Q ss_pred eeccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc
Q 004195 545 CLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF 624 (769)
Q Consensus 545 ~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~ 624 (769)
+...... ......++++|++ +++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||++++++
T Consensus 85 ~~~~~~~-~~~~~~~lv~~~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~ 157 (345)
T cd07877 85 FTPARSL-EEFNDVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDC 157 (345)
T ss_pred eeecccc-cccccEEEEehhc-ccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCC
Confidence 8643221 1123468888887 78999888643 589999999999999999999998 999999999999999999
Q ss_pred eeeecCCCCchhhhccCCcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchh-HHHHhhhhhccc
Q 004195 625 HVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVV-VLVKDLLQVNIG 702 (769)
Q Consensus 625 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~-~~~~~~~~~~~~ 702 (769)
.+||+|||+++...... .....+..|.+||...+ ..++.++|||||||++|||++|++||..... ............
T Consensus 158 ~~kl~dfg~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 236 (345)
T cd07877 158 ELKILDFGLARHTDDEM-TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 236 (345)
T ss_pred CEEEecccccccccccc-cccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 99999999986543221 12223445678887655 4678999999999999999999999864332 112221111110
Q ss_pred ccc-ccccccC----------ccccC----CCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 703 TDE-ARKSIVD----------PAVMN----ECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 703 ~~~-~~~~~~d----------~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
... ....+.+ +.... .........+.+++.+|++.||++||++.+++.|+||.+-
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~ 306 (345)
T cd07877 237 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 306 (345)
T ss_pred CCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhc
Confidence 000 0000000 00000 0000123458899999999999999999999999999853
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-34 Score=302.56 Aligned_cols=262 Identities=19% Similarity=0.305 Sum_probs=197.5
Q ss_pred CCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 482 FDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
|+..+.||+|++|.||+|+.. +|+.+|+|++...... ....+.+|++++++++|+||+++++++.+.. ..
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-------~~ 73 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKG-------DL 73 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCC-------CE
Confidence 556789999999999999975 7899999998755332 3467888999999999999999999987643 38
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
++||||+++ ++.+++......+++..+..++.|+++||+|||+. +|+|+||||+||++++++.+||+|||.+....
T Consensus 74 ~~v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~ 149 (283)
T cd05118 74 YLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFG 149 (283)
T ss_pred EEEEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecC
Confidence 999999975 88888876545799999999999999999999998 99999999999999999999999999986554
Q ss_pred ccC--CcceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhc-cccccccccccC-
Q 004195 639 ARG--KGSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVN-IGTDEARKSIVD- 712 (769)
Q Consensus 639 ~~~--~~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~-~~~~~~~~~~~d- 712 (769)
... .........+.+||...+. .++.++||||||+++|+|+||++||....... ........ ......+....+
T Consensus 150 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd05118 150 SPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSL 229 (283)
T ss_pred CCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhh
Confidence 332 1112233456778877665 68999999999999999999999986543221 11111110 000011111100
Q ss_pred --------c----cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 713 --------P----AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 713 --------~----~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
+ .......+....++.+++.+||+.||.+||++.+++.|+|+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 230 ARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred hhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 0 00011122345668999999999999999999999999985
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-34 Score=307.29 Aligned_cols=265 Identities=22% Similarity=0.309 Sum_probs=192.8
Q ss_pred CCCCcCccccCCceeEEEEEeC---CCcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT---DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~---~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
.|+..+.||+|++|.||+|+.. +++.||+|.+.... ....+.+.+|+.++++++||||+++++++.+..
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 75 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHA----- 75 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCC-----
Confidence 3677889999999999999964 47899999998633 333467888999999999999999999998642
Q ss_pred cceEEEEEeccCCCchhhhhcC----CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC----Ccee
Q 004195 555 ISIIYLIFEYAPNETLRSFISG----PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE----NFHV 626 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~----~~~~ 626 (769)
....++||||+++ ++.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+
T Consensus 76 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~ 151 (316)
T cd07842 76 DKSVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVV 151 (316)
T ss_pred CceEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceE
Confidence 2358999999975 67666641 123688999999999999999999998 9999999999999999 8999
Q ss_pred eecCCCCchhhhccCC-----cceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH--------
Q 004195 627 KINSYNLPLLAEARGK-----GSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-------- 692 (769)
Q Consensus 627 kl~DFGla~~~~~~~~-----~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-------- 692 (769)
||+|||+++....... .....+..|++||.+.+ ..++.++|||||||++|||++|++||.......
T Consensus 152 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 231 (316)
T cd07842 152 KIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQR 231 (316)
T ss_pred EECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHH
Confidence 9999999875433221 11223445778887765 357899999999999999999999986432211
Q ss_pred --HHhhhhhccc-ccc---------ccccccCccccCCCC----H-------HHHHHHHHHHHHcCcCCCCCCCCHHHHH
Q 004195 693 --VKDLLQVNIG-TDE---------ARKSIVDPAVMNECS----D-------ESLKRMMELCLRCLSNEPKDRPSVEDTL 749 (769)
Q Consensus 693 --~~~~~~~~~~-~~~---------~~~~~~d~~~~~~~~----~-------~~~~~l~~li~~cl~~dP~~RPs~~evl 749 (769)
...++..... ... ......+......++ . ....++.+++.+|++.||++|||+.|++
T Consensus 232 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil 311 (316)
T cd07842 232 DQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEAL 311 (316)
T ss_pred HHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHh
Confidence 1111100000 000 000000000000001 0 2234588999999999999999999999
Q ss_pred HHhHh
Q 004195 750 WNLQF 754 (769)
Q Consensus 750 ~~l~~ 754 (769)
+|+||
T Consensus 312 ~~~~f 316 (316)
T cd07842 312 EHPYF 316 (316)
T ss_pred cCCCC
Confidence 99986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-36 Score=281.99 Aligned_cols=274 Identities=17% Similarity=0.296 Sum_probs=208.9
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc--CCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCC-CCcc
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS--KKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD-PSIS 556 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~-~~~~ 556 (769)
.|+...+||+|.||.||+|+.+ +|+.||+|++-.. +..-.....+|+++|..++|+|++.++..|....... ....
T Consensus 18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~ 97 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRA 97 (376)
T ss_pred HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccc
Confidence 4556789999999999999976 5888999887543 3344567889999999999999999999997654432 1234
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
.+|+||++|+. +|..++......++..++.+++.++..||.|+|.. .|+|||+||+|+|++.++..||+|||+++.
T Consensus 98 t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFGlar~ 173 (376)
T KOG0669|consen 98 TFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFGLARA 173 (376)
T ss_pred eeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeeccccccc
Confidence 68999999985 99999987766899999999999999999999999 999999999999999999999999999965
Q ss_pred hhcc------CCcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccc--ccccc
Q 004195 637 AEAR------GKGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIG--TDEAR 707 (769)
Q Consensus 637 ~~~~------~~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~--~~~~~ 707 (769)
.... ......++..|.+||.+.+ .+|+++.|||.-|||+.||.||.+.+.++........+....+ ..+.|
T Consensus 174 fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevW 253 (376)
T KOG0669|consen 174 FSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVW 253 (376)
T ss_pred eecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccC
Confidence 5322 2233455667777887655 5799999999999999999999999987765443333322111 12222
Q ss_pred ccccCcc---------ccCC-C--CHHHH------HHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 708 KSIVDPA---------VMNE-C--SDESL------KRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 708 ~~~~d~~---------~~~~-~--~~~~~------~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
..+..-. +... + -++.. .+..+++.+++..||.+|+++++++.|.||.++.
T Consensus 254 P~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp 322 (376)
T KOG0669|consen 254 PNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDP 322 (376)
T ss_pred CCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCC
Confidence 2221111 1100 0 01111 2578999999999999999999999999997653
|
|
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-34 Score=298.69 Aligned_cols=245 Identities=19% Similarity=0.292 Sum_probs=193.5
Q ss_pred cccCCceeEEEEEeC-CCcEEEEEEccccCC---CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEEEe
Q 004195 488 MCDASHGQIYKGKLT-DGTLVAIRSLKMSKK---SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFE 563 (769)
Q Consensus 488 iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV~E 563 (769)
||+|+||.||+++.. +|+.||+|.+..... ...+.+.+|++++++++||||+++++.+.+.. ..++|||
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-------~~~lv~e 73 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKK-------NLYLVME 73 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCc-------EEEEEEe
Confidence 689999999999987 599999999975433 23457889999999999999999998886533 4899999
Q ss_pred ccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhccC--
Q 004195 564 YAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARG-- 641 (769)
Q Consensus 564 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~~-- 641 (769)
|+++++|.+++.+.+ .+++..+..++.|+++||+|||+. +++||||+|+||++++++.+|++|||++.......
T Consensus 74 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~ 149 (265)
T cd05579 74 YLPGGDLASLLENVG-SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQI 149 (265)
T ss_pred cCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCccc
Confidence 999999999998654 689999999999999999999998 99999999999999999999999999986543221
Q ss_pred --------CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCc
Q 004195 642 --------KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 642 --------~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
.........|.+||......++.++||||||+++||++||+.||.............. .. ...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~---~~------~~~ 220 (265)
T cd05579 150 NLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILN---GK------IEW 220 (265)
T ss_pred ccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---CC------cCC
Confidence 1112233456778888777789999999999999999999999875543322221111 00 000
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCH---HHHHHHhHhhh
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSV---EDTLWNLQFAT 756 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~---~evl~~l~~~~ 756 (769)
.... .....+.+++.+||+.+|++|||+ .|+++|+||..
T Consensus 221 --~~~~--~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~ 262 (265)
T cd05579 221 --PEDV--EVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKG 262 (265)
T ss_pred --Cccc--cCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccC
Confidence 0011 013448899999999999999999 99999999864
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-34 Score=295.29 Aligned_cols=250 Identities=16% Similarity=0.265 Sum_probs=200.1
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC--CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK--SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
+|+..+.||+|++|.||++... ++..||+|++..... .....+.+|++++++++|||++++++.+.... .
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~-------~ 73 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKG-------K 73 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCC-------E
Confidence 4777899999999999999976 689999999976533 34467889999999999999999999987643 4
Q ss_pred EEEEEeccCCCchhhhhcCC---CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 558 IYLIFEYAPNETLRSFISGP---GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
.++|+||+++++|.+++... ...+++..+..++.++++||+|||+. +++|+||+|+||++++++.++|+|||.+
T Consensus 74 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~ 150 (258)
T cd08215 74 LCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGIS 150 (258)
T ss_pred EEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccce
Confidence 89999999999999999753 35799999999999999999999998 9999999999999999999999999998
Q ss_pred hhhhccC--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccC
Q 004195 635 LLAEARG--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVD 712 (769)
Q Consensus 635 ~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 712 (769)
....... .....+...|.+||......++.++||||+|+++++|++|+.|+.............. . ..
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~---~-------~~ 220 (258)
T cd08215 151 KVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILK---G-------QY 220 (258)
T ss_pred eecccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhc---C-------CC
Confidence 6543332 1112334457788888788899999999999999999999999875542222111100 0 00
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 713 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
+.+...++ ..+.+++.+||..+|++|||+.|+++|+|+
T Consensus 221 ~~~~~~~~----~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 221 PPIPSQYS----SELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred CCCCCCCC----HHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 11111223 348899999999999999999999999885
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-34 Score=296.03 Aligned_cols=251 Identities=18% Similarity=0.264 Sum_probs=195.0
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC-----CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK-----KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~-----~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
.+|...+.||+|+||.||+|+.. +|+.||+|.+.... ....+.+.+|++++++++|+||+++++++.+..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~---- 77 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPE---- 77 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCC----
Confidence 46888999999999999999965 69999999885321 112246889999999999999999999886532
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
....++|+||+++++|.+++.... .+++....+++.|++.||+|||+. +++||||||+||+++.++.++|+|||+
T Consensus 78 -~~~~~~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~ 152 (264)
T cd06653 78 -EKKLSIFVEYMPGGSIKDQLKAYG-ALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGA 152 (264)
T ss_pred -CCEEEEEEEeCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcccc
Confidence 234789999999999999987544 588999999999999999999998 999999999999999999999999999
Q ss_pred chhhhccC-----CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccc
Q 004195 634 PLLAEARG-----KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARK 708 (769)
Q Consensus 634 a~~~~~~~-----~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (769)
++...... .........|.+||...+..++.++|||||||++|||++|++||....... ...+... ..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~-~~---- 225 (264)
T cd06653 153 SKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMA--AIFKIAT-QP---- 225 (264)
T ss_pred ccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHH--HHHHHHc-CC----
Confidence 86542211 111123345678998877788999999999999999999999997543211 1111100 00
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
..+ ..++.....+.+++.+|+. +|.+||++.+++.|++
T Consensus 226 --~~~----~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~ 263 (264)
T cd06653 226 --TKP----MLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPF 263 (264)
T ss_pred --CCC----CCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCC
Confidence 011 1223334458899999999 4799999999999886
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=297.85 Aligned_cols=267 Identities=21% Similarity=0.292 Sum_probs=197.6
Q ss_pred CCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhc---cCCceeeEeeeeeccCCCCCCc
Q 004195 482 FDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKL---RHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l---~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
|++.+.||+|+||.||+|+.+ +++.||+|+++..... ....+.+|+.+++++ +||||+++++++.+.+.+ ..
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~--~~ 78 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTD--RE 78 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCC--CC
Confidence 566789999999999999987 5899999999754322 234567788887766 599999999999864431 23
Q ss_pred ceEEEEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 556 SIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
...+++|||++ ++|.+++... ...+++..+..++.|+++||+|||+. +++|+||||+||+++.++.+||+|||.+
T Consensus 79 ~~~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~ 154 (287)
T cd07838 79 LKLTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLA 154 (287)
T ss_pred ceeEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCcc
Confidence 35899999997 5898888743 23689999999999999999999998 9999999999999999999999999998
Q ss_pred hhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhccc-cccccc---
Q 004195 635 LLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIG-TDEARK--- 708 (769)
Q Consensus 635 ~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~-~~~~~~--- 708 (769)
........ ........|.+||...+..++.++|||||||++|||+||++|+...... ....+...... ....+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07838 155 RIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNV 234 (287)
T ss_pred eeccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCc
Confidence 66533222 1222344577899888888999999999999999999999998754322 22222211100 000000
Q ss_pred ----cccCccc---cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 709 ----SIVDPAV---MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 709 ----~~~d~~~---~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
....... .....++....+.+++.+||+.||++||+++|++.|+|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 235 SLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred ccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 0000000 011122334668899999999999999999999999885
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-34 Score=293.93 Aligned_cols=249 Identities=20% Similarity=0.365 Sum_probs=198.4
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC--CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK--SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
+|+..+.||+|++|.||+|+.. +++.||+|.+..... ...+.+.+|++++++++|||++++++++.+.. .
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-------~ 73 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSD-------S 73 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCC-------E
Confidence 4777899999999999999866 688999999986543 23467899999999999999999999987633 3
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+...
T Consensus 74 ~~~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~ 149 (254)
T cd06627 74 LYIILEYAENGSLRQIIKKFG-PFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKL 149 (254)
T ss_pred EEEEEecCCCCcHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceec
Confidence 899999999999999997553 789999999999999999999998 9999999999999999999999999998655
Q ss_pred hccCC--cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccc
Q 004195 638 EARGK--GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAV 715 (769)
Q Consensus 638 ~~~~~--~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 715 (769)
..... ........|.+||...+..++.++||||+|+++|||++|+.|+.......... ..... ..+.+
T Consensus 150 ~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~--~~~~~--------~~~~~ 219 (254)
T cd06627 150 NDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALF--RIVQD--------DHPPL 219 (254)
T ss_pred CCCcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHH--HHhcc--------CCCCC
Confidence 43322 12233445678888777778999999999999999999999986543211111 10000 01111
Q ss_pred cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 716 MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 716 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
.... ...+.+++.+|+..+|++||++.|++.+.||
T Consensus 220 ~~~~----~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 220 PEGI----SPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred CCCC----CHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 1222 3348899999999999999999999998875
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-34 Score=301.40 Aligned_cols=254 Identities=16% Similarity=0.269 Sum_probs=191.7
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC-ChhHHHHHHHHHhhcc-CCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS-SPHMYTYHIELISKLR-HSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
++|+..+.||+|++|.||+|+.. +++.||||.++..... ...++.+|+.++.+.. ||||++++++|.+..
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~------- 87 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDS------- 87 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCC-------
Confidence 45777899999999999999987 4899999999754322 2345677888777775 999999999997643
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhccccc-CCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHT-GIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||++ +++.+++......+++..+..++.|+++|++|||+ . +|+||||||+||++++++.+||+|||++.
T Consensus 88 ~~~~v~e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~---~i~H~dl~p~nill~~~~~~kL~dfg~~~ 163 (296)
T cd06618 88 DVFICMELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKH---GVIHRDVKPSNILLDASGNVKLCDFGISG 163 (296)
T ss_pred eEEEEeeccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhC---CEecCCCcHHHEEEcCCCCEEECccccch
Confidence 3899999985 57777776434479999999999999999999996 4 89999999999999999999999999986
Q ss_pred hhhccCC-cceeecCCCcchhhhccCC----CCCCCCeeehhHHHHHHHhCCCCCCCchh--HHHHhhhhhccccccccc
Q 004195 636 LAEARGK-GSAEVSSPAKKTSVLARTE----QDDKSDVYDIGIILIEIIVGRPITSENVV--VLVKDLLQVNIGTDEARK 708 (769)
Q Consensus 636 ~~~~~~~-~~~~~~~~~~~pe~~~~~~----~~~ksDVwS~Gvil~elltG~~p~~~~~~--~~~~~~~~~~~~~~~~~~ 708 (769)
....... ........|.+||.+.+.. ++.++||||||+++|||++|+.||..... +........ .
T Consensus 164 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~----~---- 235 (296)
T cd06618 164 RLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQE----E---- 235 (296)
T ss_pred hccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcC----C----
Confidence 5432221 1112234567788775443 78999999999999999999999865321 111111110 0
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.+..... .....++.+++.+||+.||++||+++++++|+|+...
T Consensus 236 ---~~~~~~~--~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 279 (296)
T cd06618 236 ---PPSLPPN--EGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRY 279 (296)
T ss_pred ---CCCCCCC--CCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhcc
Confidence 0000000 0122348899999999999999999999999998643
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-35 Score=284.82 Aligned_cols=267 Identities=18% Similarity=0.205 Sum_probs=205.2
Q ss_pred CHHHHHHHhcCCCCcCccccCCceeEEEEE-eCCCcEEEEEEccccCCCChhHHHHHHHHHhhcc-CCceeeEeeeeecc
Q 004195 471 TLDELKEATDCFDSSSFMCDASHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLR-HSNLVSALGHCLDF 548 (769)
Q Consensus 471 ~~~el~~~t~~f~~~~~iG~G~~g~Vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~ 548 (769)
+++|+-+.|+ +.||+|+|+.|--++ +.+|..+|||++.+..........+|++++.+.+ |+||++++++|++.
T Consensus 74 ~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd 148 (463)
T KOG0607|consen 74 KFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD 148 (463)
T ss_pred hHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence 3677777774 889999999999998 6789999999999876666788999999999985 99999999999874
Q ss_pred CCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc---e
Q 004195 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF---H 625 (769)
Q Consensus 549 ~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~---~ 625 (769)
. .+|||||-|.||+|..+|+++. .+++.+..++.++|+.||.|||.+ ||.|||+||+|||..+.. -
T Consensus 149 ~-------~FYLVfEKm~GGplLshI~~~~-~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsP 217 (463)
T KOG0607|consen 149 T-------RFYLVFEKMRGGPLLSHIQKRK-HFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSP 217 (463)
T ss_pred c-------eEEEEEecccCchHHHHHHHhh-hccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCc
Confidence 4 3899999999999999998654 689999999999999999999999 999999999999996543 4
Q ss_pred eeecCCCCchhhhcc---------CCcceeecCCCcchhhhc-----cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhH
Q 004195 626 VKINSYNLPLLAEAR---------GKGSAEVSSPAKKTSVLA-----RTEQDDKSDVYDIGIILIEIIVGRPITSENVVV 691 (769)
Q Consensus 626 ~kl~DFGla~~~~~~---------~~~~~~~~~~~~~pe~~~-----~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~ 691 (769)
+||+||.++.-+... .-.+.++.+-+|+||+.. ...|+.++|.||+|||+|-|+.|.+||.+.-..
T Consensus 218 vKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~ 297 (463)
T KOG0607|consen 218 VKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGA 297 (463)
T ss_pred eeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCC
Confidence 899999886433211 123344556678888642 346899999999999999999999999753211
Q ss_pred H-----------HHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcc
Q 004195 692 L-----------VKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQG 760 (769)
Q Consensus 692 ~-----------~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~ 760 (769)
. -++.+...+ .+...++.| .-....+.+..+++...+..|+.+|-++.+++.|+|+....++
T Consensus 298 dCGWdrGe~Cr~CQ~~LFesI--QEGkYeFPd-----kdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~e 370 (463)
T KOG0607|consen 298 DCGWDRGEVCRVCQNKLFESI--QEGKYEFPD-----KDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAPE 370 (463)
T ss_pred cCCccCCCccHHHHHHHHHHH--hccCCcCCh-----hhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccchh
Confidence 0 000000000 001111111 1122345668899999999999999999999999998765443
|
|
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-34 Score=307.95 Aligned_cols=266 Identities=17% Similarity=0.250 Sum_probs=194.6
Q ss_pred cCCC-CcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC--------------hhHHHHHHHHHhhccCCceeeEee
Q 004195 480 DCFD-SSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS--------------PHMYTYHIELISKLRHSNLVSALG 543 (769)
Q Consensus 480 ~~f~-~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~--------------~~~~~~Ei~~l~~l~H~nIv~l~~ 543 (769)
++|. ..+.||+|+||+||+|+.. +++.||||.++...... ...+.+|++++++++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 3454 3577999999999999965 68999999986542221 125778999999999999999999
Q ss_pred eeeccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC
Q 004195 544 HCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN 623 (769)
Q Consensus 544 ~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~ 623 (769)
++...+ ..++||||++ |+|.+++.... .+++.....++.|+++||+|||+. +|+||||||+||+++.+
T Consensus 88 ~~~~~~-------~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~ 155 (335)
T PTZ00024 88 VYVEGD-------FINLVMDIMA-SDLKKVVDRKI-RLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSK 155 (335)
T ss_pred EEecCC-------cEEEEEeccc-cCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCC
Confidence 987643 3899999997 69999987543 689999999999999999999998 99999999999999999
Q ss_pred ceeeecCCCCchhhhcc----------------CCcceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCC
Q 004195 624 FHVKINSYNLPLLAEAR----------------GKGSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITS 686 (769)
Q Consensus 624 ~~~kl~DFGla~~~~~~----------------~~~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~ 686 (769)
+.+|++|||+++..... ..........|.+||...+. .++.++|||||||++|||+||++||.
T Consensus 156 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~ 235 (335)
T PTZ00024 156 GICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFP 235 (335)
T ss_pred CCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999998654311 01111223456778876543 46899999999999999999999987
Q ss_pred CchhHHHHhhhhhcccc--cccccccc--------Ccccc---CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 687 ENVVVLVKDLLQVNIGT--DEARKSIV--------DPAVM---NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 687 ~~~~~~~~~~~~~~~~~--~~~~~~~~--------d~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
..........+...... ...+.... .+... ..........+.+++.+|++.+|++||+++|++.|+|
T Consensus 236 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~ 315 (335)
T PTZ00024 236 GENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEY 315 (335)
T ss_pred CCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcc
Confidence 54432211111111110 00010000 00000 0001112345889999999999999999999999999
Q ss_pred hhhh
Q 004195 754 FATQ 757 (769)
Q Consensus 754 ~~~~ 757 (769)
|...
T Consensus 316 ~~~~ 319 (335)
T PTZ00024 316 FKSD 319 (335)
T ss_pred cCCC
Confidence 9754
|
|
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-34 Score=302.38 Aligned_cols=249 Identities=21% Similarity=0.289 Sum_probs=193.1
Q ss_pred CCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC---ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 482 FDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS---SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~---~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
|+..+.||+|+||.||+|+.. +++.||+|.+...... ..+++.+|+++++.++|+|++++++++.+.. .
T Consensus 17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-------~ 89 (308)
T cd06634 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH-------T 89 (308)
T ss_pred HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCC-------e
Confidence 566788999999999999975 6889999998643222 2346788999999999999999999998643 3
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.++||||+. |++.+++......+++.++..++.|++.|++|||+. +++||||||+||+++.++.+|++|||++...
T Consensus 90 ~~lv~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 165 (308)
T cd06634 90 AWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIM 165 (308)
T ss_pred eEEEEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceee
Confidence 799999996 688887764445689999999999999999999998 9999999999999999999999999998654
Q ss_pred hccCCcceeecCCCcchhhhc---cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccccccccccccCc
Q 004195 638 EARGKGSAEVSSPAKKTSVLA---RTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 638 ~~~~~~~~~~~~~~~~pe~~~---~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~ 713 (769)
.... .......|.+||... ...++.++|||||||++|||++|+.|+....... ...+... ..+
T Consensus 166 ~~~~--~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-----------~~~ 232 (308)
T cd06634 166 APAN--XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN-----------ESP 232 (308)
T ss_pred cCcc--cccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhc-----------CCC
Confidence 3221 122334577888764 3467889999999999999999999876533211 1111110 001
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.. ........+.+++.+||+.+|++||+++++++|+|+...
T Consensus 233 ~~---~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~ 273 (308)
T cd06634 233 AL---QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 273 (308)
T ss_pred Cc---CcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcccccc
Confidence 11 011233458899999999999999999999999998764
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=324.21 Aligned_cols=270 Identities=14% Similarity=0.145 Sum_probs=186.6
Q ss_pred HHhcCCCCcCccccCCceeEEEEEeC--CCcEEEEEEc--------------ccc---CCCChhHHHHHHHHHhhccCCc
Q 004195 477 EATDCFDSSSFMCDASHGQIYKGKLT--DGTLVAIRSL--------------KMS---KKSSPHMYTYHIELISKLRHSN 537 (769)
Q Consensus 477 ~~t~~f~~~~~iG~G~~g~Vy~~~~~--~g~~vAvK~~--------------~~~---~~~~~~~~~~Ei~~l~~l~H~n 537 (769)
...++|...+.||+|+||+||+|..+ ++..+++|.+ ... .......+.+|++++++++|||
T Consensus 145 ~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hpn 224 (501)
T PHA03210 145 EFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHEN 224 (501)
T ss_pred hhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCC
Confidence 34578999999999999999998754 2333333311 100 1112346789999999999999
Q ss_pred eeeEeeeeeccCCCCCCcceEEEEEeccCCCchhhhhcCCC----CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCc
Q 004195 538 LVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPG----YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNL 613 (769)
Q Consensus 538 Iv~l~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDl 613 (769)
||++++++.+.+. .|+|+|++. ++|.+++.... ..........|+.|++.||+|||+. +|+||||
T Consensus 225 Iv~l~~~~~~~~~-------~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDL 293 (501)
T PHA03210 225 ILKIEEILRSEAN-------TYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDI 293 (501)
T ss_pred cCcEeEEEEECCe-------eEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 9999999986443 799999995 57777765221 1233556778999999999999998 9999999
Q ss_pred cccceeeCCCceeeecCCCCchhhhccCC---cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCC-CCCCch
Q 004195 614 KITDVLLDENFHVKINSYNLPLLAEARGK---GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRP-ITSENV 689 (769)
Q Consensus 614 Kp~NILld~~~~~kl~DFGla~~~~~~~~---~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~-p~~~~~ 689 (769)
||+|||++.++.+||+|||+++....... ....++..|++||.+.+..++.++|||||||++|||++|+. |+....
T Consensus 294 KP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~ 373 (501)
T PHA03210 294 KLENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGG 373 (501)
T ss_pred CHHHEEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCC
Confidence 99999999999999999999976543221 12234566778999988899999999999999999999874 443221
Q ss_pred ---hHHHHhhhhhcccccccc-------ccccCc-cc---cCCCCH-----HHHHHHHHHHHHcCcCCCCCCCCHHHHHH
Q 004195 690 ---VVLVKDLLQVNIGTDEAR-------KSIVDP-AV---MNECSD-----ESLKRMMELCLRCLSNEPKDRPSVEDTLW 750 (769)
Q Consensus 690 ---~~~~~~~~~~~~~~~~~~-------~~~~d~-~~---~~~~~~-----~~~~~l~~li~~cl~~dP~~RPs~~evl~ 750 (769)
.....+.+.......+.+ .+.++. .+ ....+. .....+.+++.+|++.||++|||+.|++.
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 374 GKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred CCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 112222111100000000 000000 00 000000 01234678899999999999999999999
Q ss_pred HhHhhhh
Q 004195 751 NLQFATQ 757 (769)
Q Consensus 751 ~l~~~~~ 757 (769)
|+||...
T Consensus 454 hp~f~~~ 460 (501)
T PHA03210 454 LPLFSAE 460 (501)
T ss_pred ChhhhcC
Confidence 9999754
|
|
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=326.04 Aligned_cols=262 Identities=19% Similarity=0.296 Sum_probs=193.4
Q ss_pred HHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC-CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCC-
Q 004195 476 KEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK-KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD- 552 (769)
Q Consensus 476 ~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~- 552 (769)
.+...+|++.+.||+||||.|||++.+ ||+.+|||++.... ...-..+.+|+..+++++|||||+++..+.+...+.
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 466778999999999999999999977 89999999998653 222356889999999999999999886542210000
Q ss_pred --------------------------------------------------------------------------------
Q 004195 553 -------------------------------------------------------------------------------- 552 (769)
Q Consensus 553 -------------------------------------------------------------------------------- 552 (769)
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence
Q ss_pred ------------------------C-------CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccc
Q 004195 553 ------------------------P-------SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLH 601 (769)
Q Consensus 553 ------------------------~-------~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH 601 (769)
. ....+||-||||+.-.++++++++...-.-...++++++|++||+|+|
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIH 714 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHH
Confidence 0 014578999999998888888865422145677899999999999999
Q ss_pred cCCCCCccccCccccceeeCCCceeeecCCCCchhhh--------------------ccCCcceeecCCCcchhhhccC-
Q 004195 602 TGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE--------------------ARGKGSAEVSSPAKKTSVLART- 660 (769)
Q Consensus 602 ~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~--------------------~~~~~~~~~~~~~~~pe~~~~~- 660 (769)
++ +||||||||.||++|++..+||+|||+|.... ....+...+++.|.+||.+.+.
T Consensus 715 ~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~ 791 (1351)
T KOG1035|consen 715 DQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTS 791 (1351)
T ss_pred hC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccc
Confidence 99 99999999999999999999999999996521 0011334566778889987654
Q ss_pred --CCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCcccc--CCCCHHHHHHHHHHHHHcCc
Q 004195 661 --EQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM--NECSDESLKRMMELCLRCLS 736 (769)
Q Consensus 661 --~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~l~~li~~cl~ 736 (769)
.|+.|+||||+|||++||+. ||+.... .+..+.. +. ++.++ ..+..+....-.++|.++++
T Consensus 792 ~~~Yn~KiDmYSLGIVlFEM~y---PF~TsME-Ra~iL~~--LR---------~g~iP~~~~f~~~~~~~e~slI~~Ll~ 856 (1351)
T KOG1035|consen 792 SNKYNSKIDMYSLGIVLFEMLY---PFGTSME-RASILTN--LR---------KGSIPEPADFFDPEHPEEASLIRWLLS 856 (1351)
T ss_pred cccccchhhhHHHHHHHHHHhc---cCCchHH-HHHHHHh--cc---------cCCCCCCcccccccchHHHHHHHHHhc
Confidence 49999999999999999985 4543321 1111111 11 11111 11222223334678999999
Q ss_pred CCCCCCCCHHHHHHHhHhh
Q 004195 737 NEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 737 ~dP~~RPs~~evl~~l~~~ 755 (769)
.||.+|||+.|+|++-++-
T Consensus 857 hdP~kRPtA~eLL~s~llp 875 (1351)
T KOG1035|consen 857 HDPSKRPTATELLNSELLP 875 (1351)
T ss_pred CCCccCCCHHHHhhccCCC
Confidence 9999999999999887654
|
|
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-34 Score=299.15 Aligned_cols=261 Identities=21% Similarity=0.315 Sum_probs=192.2
Q ss_pred CCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC-ChhHHHHHHHHHhhcc-CCceeeEeeeeeccCCCCCCcceE
Q 004195 482 FDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS-SPHMYTYHIELISKLR-HSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
|...+.||+|++|.||+|+.. +++.||||++...... ......+|+..+++++ ||||+++++++.+.+ ..
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~-------~~ 73 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFREND-------EL 73 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCC-------cE
Confidence 566789999999999999976 5889999998754322 2234567999999999 999999999987633 38
Q ss_pred EEEEeccCCCchhhhhcCCC-CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 559 YLIFEYAPNETLRSFISGPG-YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
++||||+ +|+|.+++.... ..+++..+..++.|+++||+|||+. +++|+||||+||++++++.++|+|||.+...
T Consensus 74 ~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~ 149 (283)
T cd07830 74 YFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREI 149 (283)
T ss_pred EEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceec
Confidence 9999999 789999887443 4689999999999999999999998 9999999999999999999999999998655
Q ss_pred hccCC-cceeecCCCcchhhhc-cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhccccc--cc------
Q 004195 638 EARGK-GSAEVSSPAKKTSVLA-RTEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIGTD--EA------ 706 (769)
Q Consensus 638 ~~~~~-~~~~~~~~~~~pe~~~-~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~~~--~~------ 706 (769)
..... ........+.+||.+. ...++.++||||||++++||++|++||...... ........ .... +.
T Consensus 150 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 228 (283)
T cd07830 150 RSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSV-LGTPTKQDWPEGYK 228 (283)
T ss_pred cCCCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHh-cCCCChhhhhhHhh
Confidence 43222 1122234566788664 345789999999999999999999988644321 11111110 0000 00
Q ss_pred cccccCccc-------cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 707 RKSIVDPAV-------MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 707 ~~~~~d~~~-------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
.....+..+ .....+.....+.+++.+||+.+|++|||++|++.|+|+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 229 LASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred hhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 000000000 000011113558899999999999999999999999885
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=303.81 Aligned_cols=271 Identities=18% Similarity=0.274 Sum_probs=200.6
Q ss_pred HHHHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC--CCChhHHHHHHHHHhhccCCceeeEeeeeeccCC
Q 004195 474 ELKEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK--KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550 (769)
Q Consensus 474 el~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~ 550 (769)
|+..++++|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||++++++|....
T Consensus 4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~- 82 (328)
T cd07856 4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPL- 82 (328)
T ss_pred ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCC-
Confidence 45567889999999999999999999965 79999999886432 223467889999999999999999999886522
Q ss_pred CCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecC
Q 004195 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINS 630 (769)
Q Consensus 551 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~D 630 (769)
...++|+||+ +++|.++++.. .+++.....++.|+++||+|||+. +|+||||||+||++++++.+|++|
T Consensus 83 -----~~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~d 151 (328)
T cd07856 83 -----EDIYFVTELL-GTDLHRLLTSR--PLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICD 151 (328)
T ss_pred -----CcEEEEeehh-ccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCc
Confidence 2378999999 56899888743 578888899999999999999998 999999999999999999999999
Q ss_pred CCCchhhhccCCcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccc--cccc
Q 004195 631 YNLPLLAEARGKGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGT--DEAR 707 (769)
Q Consensus 631 FGla~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~--~~~~ 707 (769)
||.+....... ........+.+||.+.+ ..++.++|||||||++|||+||++||...........+....+. .+..
T Consensus 152 fg~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 230 (328)
T cd07856 152 FGLARIQDPQM-TGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVI 230 (328)
T ss_pred cccccccCCCc-CCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 99986543222 11222345677887654 56899999999999999999999998654322111111110000 0000
Q ss_pred ccccCc---------cccCCCC-----HHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 708 KSIVDP---------AVMNECS-----DESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 708 ~~~~d~---------~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
....+. ......+ +.....+.+++.+|++.+|++||++++++.|.|+...
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~ 294 (328)
T cd07856 231 NTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPY 294 (328)
T ss_pred HhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccc
Confidence 000000 0000000 1123458899999999999999999999999998644
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-34 Score=297.62 Aligned_cols=262 Identities=18% Similarity=0.330 Sum_probs=196.9
Q ss_pred CCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC--CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 482 FDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK--KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
|+..+.||+|++|.||+|+.. +++.||+|.+.... ....+.+.+|++++++++|+||+++++++.+.. ..
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-------~~ 73 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTER-------KL 73 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCC-------ce
Confidence 456788999999999999976 59999999998653 223467888999999999999999999988643 38
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
++||||++ ++|.+++.+....+++..+.+++.++++||+|||+. +|+||||+|+||++++++.+||+|||.++...
T Consensus 74 ~~v~e~~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~ 149 (282)
T cd07829 74 YLVFEYCD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFG 149 (282)
T ss_pred EEEecCcC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccC
Confidence 99999998 599999986544799999999999999999999998 99999999999999999999999999986543
Q ss_pred ccCC--cceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccc-ccccccccc--
Q 004195 639 ARGK--GSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIG-TDEARKSIV-- 711 (769)
Q Consensus 639 ~~~~--~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~-~~~~~~~~~-- 711 (769)
.... ........+.+||..... .++.++|||||||++|||++|++||....... .......... ....+....
T Consensus 150 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (282)
T cd07829 150 IPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKL 229 (282)
T ss_pred CCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccc
Confidence 3221 112223456778877665 78999999999999999999999986543221 1111110000 000000000
Q ss_pred ---C---ccccC----CCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 712 ---D---PAVMN----ECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 712 ---d---~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
+ +.... ...+.....+.+++.+||+.+|++||++++++.|+||
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 230 PDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred ccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 0 00000 0011123458999999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-34 Score=302.72 Aligned_cols=262 Identities=17% Similarity=0.228 Sum_probs=188.1
Q ss_pred CccccCCceeEEEEEeCCCcEEEEEEccccC--CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEEEe
Q 004195 486 SFMCDASHGQIYKGKLTDGTLVAIRSLKMSK--KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFE 563 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV~E 563 (769)
+.+|.|+++.||+++. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+ ..+++||
T Consensus 8 ~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~-------~~~~~~e 79 (314)
T cd08216 8 KCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDS-------ELYVVSP 79 (314)
T ss_pred HhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCC-------eEEEEEe
Confidence 3444555555555544 68999999997542 233467899999999999999999999987643 3899999
Q ss_pred ccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhccCC
Q 004195 564 YAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGK 642 (769)
Q Consensus 564 y~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~ 642 (769)
|+++|+|.+++... ...+++.....++.|+++||+|||+. +|+||||||+||+++.++.+|++|||.+........
T Consensus 80 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~ 156 (314)
T cd08216 80 LMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGK 156 (314)
T ss_pred ccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeeccccc
Confidence 99999999999742 34688999999999999999999999 999999999999999999999999998754322111
Q ss_pred ---------cceeecCCCcchhhhcc--CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhcccc-------
Q 004195 643 ---------GSAEVSSPAKKTSVLAR--TEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGT------- 703 (769)
Q Consensus 643 ---------~~~~~~~~~~~pe~~~~--~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~------- 703 (769)
........|.+||.+.. ..++.++|||||||++|||++|+.||....... ..+........
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (314)
T cd08216 157 RQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTY 236 (314)
T ss_pred cccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCch
Confidence 11112235677887754 358899999999999999999999997543211 11101000000
Q ss_pred cc---cccc----ccCccc----cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 704 DE---ARKS----IVDPAV----MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 704 ~~---~~~~----~~d~~~----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
.. .... ..++.. ..........++.+++.+||+.||++|||++++++|+|+..-.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~ 302 (314)
T cd08216 237 PLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCK 302 (314)
T ss_pred hhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhc
Confidence 00 0000 001110 0111223445688999999999999999999999999997543
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=299.29 Aligned_cols=248 Identities=20% Similarity=0.290 Sum_probs=192.7
Q ss_pred CCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC---hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 482 FDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS---PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~---~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
|...+.||+|+||+||+|+.. +|+.||+|++....... ...+.+|++++++++|||++++++++.+.. .
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-------~ 95 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEH-------T 95 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCC-------E
Confidence 555678999999999999965 68999999987543322 246788999999999999999999998643 3
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.++||||++ |++.+++......+++.++..++.|++.||+|||+. +++||||||+||++++++.+||+|||++...
T Consensus 96 ~~lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~ 171 (313)
T cd06633 96 AWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKS 171 (313)
T ss_pred EEEEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCccc
Confidence 899999996 688888775555799999999999999999999998 9999999999999999999999999988543
Q ss_pred hccCCcceeecCCCcchhhhc---cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccccccccccccCc
Q 004195 638 EARGKGSAEVSSPAKKTSVLA---RTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 638 ~~~~~~~~~~~~~~~~pe~~~---~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~ 713 (769)
... ........|.+||.+. ...++.++|||||||++|||++|++|+....... ........ .+
T Consensus 172 ~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~-----------~~ 238 (313)
T cd06633 172 SPA--NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQND-----------SP 238 (313)
T ss_pred CCC--CCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC-----------CC
Confidence 221 1222344577788763 3568899999999999999999999986543221 11111100 01
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
... .......+.+++.+||+.+|++||++.++++|+|+..
T Consensus 239 ~~~---~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~ 278 (313)
T cd06633 239 TLQ---SNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRR 278 (313)
T ss_pred CCC---ccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCC
Confidence 110 1112234888999999999999999999999999864
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-33 Score=302.62 Aligned_cols=276 Identities=15% Similarity=0.236 Sum_probs=201.7
Q ss_pred HHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 477 EATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 477 ~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
...++|+..+.||+|+||.||+|... +|..||||++...... ..+.+.+|++++++++||||+++++++...... .
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-~ 90 (343)
T cd07880 12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSL-D 90 (343)
T ss_pred ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccc-c
Confidence 35678999999999999999999855 7999999998643221 234688999999999999999999998653321 1
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
.....++||||+ +++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+|++|||+
T Consensus 91 ~~~~~~lv~e~~-~~~l~~~~~~~--~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~dfg~ 164 (343)
T cd07880 91 RFHDFYLVMPFM-GTDLGKLMKHE--KLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGL 164 (343)
T ss_pred ccceEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeccc
Confidence 123468999999 67999888643 589999999999999999999998 999999999999999999999999999
Q ss_pred chhhhccCCcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhcccccccccccc
Q 004195 634 PLLAEARGKGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIGTDEARKSIV 711 (769)
Q Consensus 634 a~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 711 (769)
+........ .......|++||.+.. ..++.++|||||||++|++++|++||...... ...............+...+
T Consensus 165 ~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (343)
T cd07880 165 ARQTDSEMT-GYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKL 243 (343)
T ss_pred ccccccCcc-ccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhh
Confidence 875533221 1223345677887654 35789999999999999999999998754321 11111111100000000000
Q ss_pred C-----------cccc----CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcc
Q 004195 712 D-----------PAVM----NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQG 760 (769)
Q Consensus 712 d-----------~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~ 760 (769)
. +... ....+.....+.+++.+|++.||++|||+.+++.|+||......
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~~ 307 (343)
T cd07880 244 QSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDP 307 (343)
T ss_pred cchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcCc
Confidence 0 0000 00011223348899999999999999999999999999865443
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=304.55 Aligned_cols=270 Identities=17% Similarity=0.289 Sum_probs=196.0
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCC------
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD------ 552 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~------ 552 (769)
.+|...+.||.|+||.||+|+.. +|+.||+|.+........+.+.+|++++++++||||+++++++.......
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 57888999999999999999975 68999999997665555677889999999999999999998876532210
Q ss_pred -CCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeC-CCceeeecC
Q 004195 553 -PSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD-ENFHVKINS 630 (769)
Q Consensus 553 -~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld-~~~~~kl~D 630 (769)
......++||||++ ++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||+++ +++.+|++|
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~kl~d 158 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLEQG--PLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVLKIGD 158 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceEEECC
Confidence 01134799999997 5898888643 588999999999999999999998 999999999999997 456799999
Q ss_pred CCCchhhhccCC-----cceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchh-HHHHhhhhhc-cc
Q 004195 631 YNLPLLAEARGK-----GSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVV-VLVKDLLQVN-IG 702 (769)
Q Consensus 631 FGla~~~~~~~~-----~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~-~~~~~~~~~~-~~ 702 (769)
||.++....... ........|.+||.+.. ..++.++|||||||++|||++|+.||..... .......... ..
T Consensus 159 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 238 (342)
T cd07854 159 FGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVV 238 (342)
T ss_pred cccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence 999865422111 11123445678886543 4678899999999999999999999865432 1111111100 00
Q ss_pred cccccccc------------cCccc-cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 703 TDEARKSI------------VDPAV-MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 703 ~~~~~~~~------------~d~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
........ ..+.. .....+....++.+++.+|++.||++|||++|+++|+|+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~ 304 (342)
T cd07854 239 REEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMS 304 (342)
T ss_pred ChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccc
Confidence 00000000 00000 0000111234588999999999999999999999999996
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-35 Score=279.38 Aligned_cols=265 Identities=18% Similarity=0.224 Sum_probs=200.0
Q ss_pred cccCHHHHHHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-CChhHHHHHHHHHhhc-cCCceeeEeee
Q 004195 468 RTFTLDELKEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-SSPHMYTYHIELISKL-RHSNLVSALGH 544 (769)
Q Consensus 468 ~~~~~~el~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l-~H~nIv~l~~~ 544 (769)
..|+-++|+.. ..||.|+||+|+|-.++ .|+..|||+++.... .+.+++..|.+...+- +.||||+++|.
T Consensus 59 ~~F~~~~Lqdl-------g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa 131 (361)
T KOG1006|consen 59 HTFTSDNLQDL-------GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGA 131 (361)
T ss_pred cccccchHHHH-------HHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhh
Confidence 35666676654 78999999999999876 799999999986543 3346788888865554 69999999999
Q ss_pred eeccCCCCCCcceEEEEEeccCCCchhhhhc----CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceee
Q 004195 545 CLDFSLDDPSISIIYLIFEYAPNETLRSFIS----GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLL 620 (769)
Q Consensus 545 ~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~----~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl 620 (769)
+... +..|+.||.|. -|+..+.+ .....+++...-.|+...++||.||.+. ..|||||+||+|||+
T Consensus 132 ~F~E-------GdcWiCMELMd-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPSNILl 201 (361)
T KOG1006|consen 132 LFSE-------GDCWICMELMD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPSNILL 201 (361)
T ss_pred hhcC-------CceeeeHHHHh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChhheEE
Confidence 8752 33899999996 47766554 2223688888888999999999999876 389999999999999
Q ss_pred CCCceeeecCCCCchhh-hccCCcceeecCCCcchhhhcc--CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhh
Q 004195 621 DENFHVKINSYNLPLLA-EARGKGSAEVSSPAKKTSVLAR--TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLL 697 (769)
Q Consensus 621 d~~~~~kl~DFGla~~~-~~~~~~~~~~~~~~~~pe~~~~--~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~ 697 (769)
|..|.+|++|||++-.. +.-..+...+..||++||.+.. ..|+.+|||||+|++|||+.||+.|+..-. ..+.++.
T Consensus 202 dr~G~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~-svfeql~ 280 (361)
T KOG1006|consen 202 DRHGDVKLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWD-SVFEQLC 280 (361)
T ss_pred ecCCCEeeecccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHH-HHHHHHH
Confidence 99999999999998443 3333344556789999987653 358999999999999999999999986532 2334444
Q ss_pred hhccccccccccccCccccCCC-CHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 698 QVNIGTDEARKSIVDPAVMNEC-SDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 698 ~~~~~~~~~~~~~~d~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
++..+.++. +.... .-+....+..++..|+.+|-++||+..++.++++...-.
T Consensus 281 ~Vv~gdpp~--------l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~ 334 (361)
T KOG1006|consen 281 QVVIGDPPI--------LLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMYA 334 (361)
T ss_pred HHHcCCCCe--------ecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhhhh
Confidence 443332211 11110 112344589999999999999999999999999865443
|
|
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=297.39 Aligned_cols=254 Identities=16% Similarity=0.225 Sum_probs=193.8
Q ss_pred CCCCcCccccCCceeEEEEEe----CCCcEEEEEEccccC----CCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCC
Q 004195 481 CFDSSSFMCDASHGQIYKGKL----TDGTLVAIRSLKMSK----KSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLD 551 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~----~~g~~vAvK~~~~~~----~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~ 551 (769)
+|+..+.||+|+||.||+|+. .+|+.||+|+++... ....+.+.+|++++.++ +|+||+++++++....
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~-- 78 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDT-- 78 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCC--
Confidence 467789999999999999985 368999999987532 12235688899999999 5999999998887533
Q ss_pred CCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCC
Q 004195 552 DPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSY 631 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DF 631 (769)
..++||||+++++|.+++.... .+++.....++.|+++||+|||+. +++||||||+||+++.++.+||+||
T Consensus 79 -----~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~df 149 (290)
T cd05613 79 -----KLHLILDYINGGELFTHLSQRE-RFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDF 149 (290)
T ss_pred -----eEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeC
Confidence 3799999999999999997543 688999999999999999999998 9999999999999999999999999
Q ss_pred CCchhhhccCCc---ceeecCCCcchhhhccC--CCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhcccccc
Q 004195 632 NLPLLAEARGKG---SAEVSSPAKKTSVLART--EQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIGTDE 705 (769)
Q Consensus 632 Gla~~~~~~~~~---~~~~~~~~~~pe~~~~~--~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~~~~ 705 (769)
|++......... .......|.+||..... .++.++||||||+++|||+||+.|+...... ....+.......
T Consensus 150 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~-- 227 (290)
T cd05613 150 GLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKS-- 227 (290)
T ss_pred ccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhcc--
Confidence 998654332111 12234456778876542 4688999999999999999999998632111 111111110000
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCC-----CHHHHHHHhHhhhh
Q 004195 706 ARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRP-----SVEDTLWNLQFATQ 757 (769)
Q Consensus 706 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~~~~~ 757 (769)
.+.. +......+.+++.+|++.||++|| ++++++.|+|+...
T Consensus 228 ------~~~~----~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 274 (290)
T cd05613 228 ------EPPY----PQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKI 274 (290)
T ss_pred ------CCCC----CccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccC
Confidence 1111 122233488999999999999997 89999999998654
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=295.71 Aligned_cols=249 Identities=20% Similarity=0.311 Sum_probs=197.7
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC---CChhHHHHHHHHHhhcc-CCceeeEeeeeeccCCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK---SSPHMYTYHIELISKLR-HSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~~~ 554 (769)
++|...+.||+|++|.||+|+.. +|+.||+|++..... ...+.+.+|++++++++ ||||+++++++.+.+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~----- 75 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEE----- 75 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCc-----
Confidence 36788899999999999999976 799999999875322 22356888999999998 999999999887543
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
..++||||+++++|.+++.+.+ .+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++++|||++
T Consensus 76 --~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~ 149 (280)
T cd05581 76 --NLYFVLEYAPNGELLQYIRKYG-SLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTA 149 (280)
T ss_pred --eEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccc
Confidence 3899999999999999998654 699999999999999999999998 9999999999999999999999999998
Q ss_pred hhhhccCC----------------------cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH
Q 004195 635 LLAEARGK----------------------GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL 692 (769)
Q Consensus 635 ~~~~~~~~----------------------~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~ 692 (769)
........ ........+.+||......++.++||||||++++|+++|+.|+.......
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~ 229 (280)
T cd05581 150 KVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL 229 (280)
T ss_pred cccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 65432211 01112345677888877788999999999999999999999987544221
Q ss_pred HHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCH----HHHHHHhHh
Q 004195 693 VKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSV----EDTLWNLQF 754 (769)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~----~evl~~l~~ 754 (769)
...... . ... ..+......+.+++.+||+.+|++||++ +++++|+||
T Consensus 230 ~~~~~~---~--------~~~----~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 230 TFQKIL---K--------LEY----SFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred HHHHHH---h--------cCC----CCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 111110 0 001 1112223448899999999999999999 999999985
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-34 Score=277.20 Aligned_cols=268 Identities=22% Similarity=0.301 Sum_probs=198.5
Q ss_pred cCCCCcCccccCCceeEEEEEeC---C--CcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT---D--GTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD 552 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~---~--g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~ 552 (769)
..|+....||+|.||.||||.-. + .+.+|+|+++..+.. -.....||+.+++.++|||||.+..++...+.
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~-- 101 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDK-- 101 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc--
Confidence 45888999999999999999643 2 237999999865332 24678899999999999999999999986432
Q ss_pred CCcceEEEEEeccCCCchhhhhc----CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC----c
Q 004195 553 PSISIIYLIFEYAPNETLRSFIS----GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN----F 624 (769)
Q Consensus 553 ~~~~~~~lV~Ey~~~gsL~~~l~----~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~----~ 624 (769)
.+++++||++. ||.+.|+ .....++-...+.|..||+.|+.|||++ -|+||||||.|||+..+ |
T Consensus 102 ----~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG 173 (438)
T KOG0666|consen 102 ----KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERG 173 (438)
T ss_pred ----eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccC
Confidence 48999999985 8999887 2234688889999999999999999998 89999999999999766 8
Q ss_pred eeeecCCCCchhhhccCC-----cceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-------
Q 004195 625 HVKINSYNLPLLAEARGK-----GSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVV------- 691 (769)
Q Consensus 625 ~~kl~DFGla~~~~~~~~-----~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~------- 691 (769)
.+||+|||+++.+...-. ....++.-|++||.+.+ ..||.+.||||.|||+.||+|-+|.|...+..
T Consensus 174 ~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pf 253 (438)
T KOG0666|consen 174 RVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPF 253 (438)
T ss_pred eeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCc
Confidence 999999999988754422 22334445567887665 46999999999999999999998877643321
Q ss_pred ---HHHhhhhh-ccccccccccccC-ccc-------c----CCCC-HH-------HHHHHHHHHHHcCcCCCCCCCCHHH
Q 004195 692 ---LVKDLLQV-NIGTDEARKSIVD-PAV-------M----NECS-DE-------SLKRMMELCLRCLSNEPKDRPSVED 747 (769)
Q Consensus 692 ---~~~~~~~~-~~~~~~~~~~~~d-~~~-------~----~~~~-~~-------~~~~l~~li~~cl~~dP~~RPs~~e 747 (769)
.+..+... ..+..+.|..+.. |.. . ..++ .. -.....+|+.+++..||.+|.|+++
T Consensus 254 q~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~q 333 (438)
T KOG0666|consen 254 QHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQ 333 (438)
T ss_pred hHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHH
Confidence 12222211 1222222222211 000 0 0000 00 0122678999999999999999999
Q ss_pred HHHHhHhhhh
Q 004195 748 TLWNLQFATQ 757 (769)
Q Consensus 748 vl~~l~~~~~ 757 (769)
+++|.+|.+.
T Consensus 334 Aleh~yF~~d 343 (438)
T KOG0666|consen 334 ALEHPYFTED 343 (438)
T ss_pred HhcccccccC
Confidence 9999999865
|
|
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-33 Score=299.98 Aligned_cols=269 Identities=18% Similarity=0.227 Sum_probs=194.4
Q ss_pred CCCCcCccccCCceeEEEEEeC-C--CcEEEEEEccccC--CCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCC
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-D--GTLVAIRSLKMSK--KSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~--g~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~ 554 (769)
+|+..+.||+|+||.||+++.. + +..||+|++.... ....+.+.+|+++++++ +||||+++++++..... .
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~---~ 77 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPG---N 77 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccc---c
Confidence 4677889999999999999965 4 7899999987432 12245678899999999 59999999997653211 1
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
....++++||+. ++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++
T Consensus 78 ~~~~~~~~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a 152 (332)
T cd07857 78 FNELYLYEELME-ADLHQIIRSGQ-PLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLA 152 (332)
T ss_pred CCcEEEEEeccc-CCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCc
Confidence 234789999996 68999887543 689999999999999999999998 9999999999999999999999999998
Q ss_pred hhhhccCC------cceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhcc-cccc
Q 004195 635 LLAEARGK------GSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNI-GTDE 705 (769)
Q Consensus 635 ~~~~~~~~------~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~-~~~~ 705 (769)
+....... ....++..|++||...+ ..++.++|||||||++|||++|++||....... ....+.... ...+
T Consensus 153 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 232 (332)
T cd07857 153 RGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEE 232 (332)
T ss_pred eecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 65432211 11123445678887654 468999999999999999999999987543221 111111100 0000
Q ss_pred ccccccCc--------------cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 706 ARKSIVDP--------------AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 706 ~~~~~~d~--------------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
....+.++ .......+.....+.+++.+|++.||++|||+.|++.|+|+.+-
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~ 298 (332)
T cd07857 233 TLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIW 298 (332)
T ss_pred HHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhh
Confidence 00000000 00000011123458899999999999999999999999998643
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-34 Score=306.83 Aligned_cols=275 Identities=17% Similarity=0.255 Sum_probs=201.4
Q ss_pred HHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC--CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 477 EATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK--KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 477 ~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
...++|+....||+|++|.||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++...... .
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-~ 90 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSL-E 90 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccc-c
Confidence 45678999999999999999999976 68899999987532 22235677899999999999999999877643321 1
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
.....++|+||+ +++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 91 ~~~~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg~ 164 (343)
T cd07851 91 DFQDVYLVTHLM-GADLNNIVKCQ--KLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFGL 164 (343)
T ss_pred ccccEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEccccc
Confidence 223579999999 57999998753 589999999999999999999998 999999999999999999999999999
Q ss_pred chhhhccCCcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhcccccc-ccccc
Q 004195 634 PLLAEARGKGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIGTDE-ARKSI 710 (769)
Q Consensus 634 a~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~~~~-~~~~~ 710 (769)
+....... .....+..|.+||.... ..++.++|||||||++||++||+.||...... ....+....-...+ ....+
T Consensus 165 ~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 243 (343)
T cd07851 165 ARHTDDEM-TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKI 243 (343)
T ss_pred cccccccc-cCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Confidence 86553321 12223345677887654 36789999999999999999999998654322 12221111000000 00000
Q ss_pred c--------C-------ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcc
Q 004195 711 V--------D-------PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQG 760 (769)
Q Consensus 711 ~--------d-------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~ 760 (769)
. . +... .........+.+++.+|++.+|++|||+.||++|+|+..-...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~ 307 (343)
T cd07851 244 SSESARNYIQSLPQMPKKDFK-EVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDP 307 (343)
T ss_pred cchhHHHHHHhccccCCCCHH-HHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCC
Confidence 0 0 0000 0001124568899999999999999999999999999754433
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-35 Score=329.79 Aligned_cols=258 Identities=19% Similarity=0.319 Sum_probs=205.2
Q ss_pred HHHHhcCCCCcCccccCCceeEEEEE-eCCCcEEEEEEccccC--CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCC
Q 004195 475 LKEATDCFDSSSFMCDASHGQIYKGK-LTDGTLVAIRSLKMSK--KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLD 551 (769)
Q Consensus 475 l~~~t~~f~~~~~iG~G~~g~Vy~~~-~~~g~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~ 551 (769)
+...+-++....+||.|.||.||.|. ..+|+..|||.++... ......+.+|+.++..+.|||+|+++|+-.+.+.
T Consensus 1230 lsnV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRek- 1308 (1509)
T KOG4645|consen 1230 LSNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREK- 1308 (1509)
T ss_pred hccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHH-
Confidence 44566778899999999999999999 4579999999997543 2334568899999999999999999998765443
Q ss_pred CCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCC
Q 004195 552 DPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSY 631 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DF 631 (769)
.+|-||||.+|+|.+.+...+ ..++.....+..|++.|++|||++ |||||||||+||++|.+|.+|.+||
T Consensus 1309 ------v~IFMEyC~~GsLa~ll~~gr-i~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DF 1378 (1509)
T KOG4645|consen 1309 ------VYIFMEYCEGGSLASLLEHGR-IEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDF 1378 (1509)
T ss_pred ------HHHHHHHhccCcHHHHHHhcc-hhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecc
Confidence 799999999999999997443 567777778889999999999999 9999999999999999999999999
Q ss_pred CCchhhhccCC------cceeecCCCcchhhhccCC---CCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccc
Q 004195 632 NLPLLAEARGK------GSAEVSSPAKKTSVLARTE---QDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIG 702 (769)
Q Consensus 632 Gla~~~~~~~~------~~~~~~~~~~~pe~~~~~~---~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~ 702 (769)
|.|..+..... ....+++.|++||++.+.. -.-++||||+|||++||+||+.||...+.+. .....+..+
T Consensus 1379 Gsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~-aIMy~V~~g 1457 (1509)
T KOG4645|consen 1379 GSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEW-AIMYHVAAG 1457 (1509)
T ss_pred cceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchh-HHHhHHhcc
Confidence 99966543321 2235677889999987644 3568999999999999999999997644321 111122222
Q ss_pred cccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 703 TDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 703 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
. .| ..|+....+-.+++.+|++.||++|.++.|+++|-+...
T Consensus 1458 h--------~P----q~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~ 1499 (1509)
T KOG4645|consen 1458 H--------KP----QIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKS 1499 (1509)
T ss_pred C--------CC----CCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhcccc
Confidence 1 12 233445556889999999999999999999999877543
|
|
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-33 Score=290.09 Aligned_cols=249 Identities=19% Similarity=0.229 Sum_probs=189.6
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC-----CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK-----KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~-----~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
+|...+.||+|+||.||+++.. .+..+++|.++... .....++.+|+.++++++||||+++++++.+..
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 75 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERD----- 75 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCC-----
Confidence 4777899999999999999865 34556666554321 122345778999999999999999999987543
Q ss_pred cceEEEEEeccCCCchhhhhc---CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCC
Q 004195 555 ISIIYLIFEYAPNETLRSFIS---GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSY 631 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DF 631 (769)
..++||||+++++|.+++. .....+++..++.++.|+++||+|||+. +++|+||||+||++++ +.+|++||
T Consensus 76 --~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~ 149 (260)
T cd08222 76 --AFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDF 149 (260)
T ss_pred --ceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeeccc
Confidence 3799999999999999886 2334789999999999999999999998 9999999999999975 56999999
Q ss_pred CCchhhhccCC--cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccccc
Q 004195 632 NLPLLAEARGK--GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKS 709 (769)
Q Consensus 632 Gla~~~~~~~~--~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (769)
|.++....... ........|.+||......++.++||||||+++|+|++|+.|+............. .
T Consensus 150 g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~----------~ 219 (260)
T cd08222 150 GVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIV----------E 219 (260)
T ss_pred CceeecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH----------c
Confidence 99865432221 11122345677888777788999999999999999999999986543221111100 0
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 710 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
...+. .+.....++.+++.+||..+|++||++.|+++|+|+
T Consensus 220 ~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 220 GPTPS----LPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred CCCCC----CcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 01111 122334458899999999999999999999999985
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-34 Score=290.03 Aligned_cols=266 Identities=19% Similarity=0.261 Sum_probs=213.9
Q ss_pred cCHHHHHHHh-cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc---CCCChhHHHHHHHHHhhccCCceeeEeee
Q 004195 470 FTLDELKEAT-DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS---KKSSPHMYTYHIELISKLRHSNLVSALGH 544 (769)
Q Consensus 470 ~~~~el~~~t-~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~ 544 (769)
+..-|.+-.| +.|..-++||+||||.||-+..+ +|+.+|.|++.+. .+.......+|-.|+.+++.+.||.+-..
T Consensus 174 WK~lE~qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYA 253 (591)
T KOG0986|consen 174 WKWLELQPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYA 253 (591)
T ss_pred HHHHHhhhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeee
Confidence 3344555555 45788899999999999999976 7999999988654 23445667889999999999999999877
Q ss_pred eeccCCCCCCcceEEEEEeccCCCchhhhhcCCC-CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC
Q 004195 545 CLDFSLDDPSISIIYLIFEYAPNETLRSFISGPG-YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN 623 (769)
Q Consensus 545 ~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~ 623 (769)
|.+.+. +++|+..|.||||.-+|.+.+ ..+++....-+|.+|+-||++||+. +||.||+||+|||+|++
T Consensus 254 feTkd~-------LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~ 323 (591)
T KOG0986|consen 254 FETKDA-------LCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDH 323 (591)
T ss_pred ecCCCc-------eEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccC
Confidence 776444 999999999999999987443 4689999999999999999999999 99999999999999999
Q ss_pred ceeeecCCCCchhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccc
Q 004195 624 FHVKINSYNLPLLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIG 702 (769)
Q Consensus 624 ~~~kl~DFGla~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~ 702 (769)
|+++|+|.|+|..+..+.. ....++.+||+||++....|+...|.||+||++|||+.|+.||.......-.+-+...
T Consensus 324 GhvRISDLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr-- 401 (591)
T KOG0986|consen 324 GHVRISDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRR-- 401 (591)
T ss_pred CCeEeeccceEEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHH--
Confidence 9999999999977655543 3336788999999999999999999999999999999999999754322111100000
Q ss_pred cccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCC-----CHHHHHHHhHhhh
Q 004195 703 TDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRP-----SVEDTLWNLQFAT 756 (769)
Q Consensus 703 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~~~~ 756 (769)
-.-|+ .++++..++++.++....+++||++|. .+++|-+|++|..
T Consensus 402 ------~~~~~---~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~ 451 (591)
T KOG0986|consen 402 ------TLEDP---EEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKD 451 (591)
T ss_pred ------Hhcch---hhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCccccc
Confidence 00111 245555666789999999999999996 6789999999875
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-34 Score=302.92 Aligned_cols=243 Identities=18% Similarity=0.226 Sum_probs=199.0
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCCc
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.++.|.....+|.|+|+.|-.+... +++..|||++... ..+..+|+.++... .||||+++.+.|.+...
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~----~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~----- 390 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR----ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKE----- 390 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheecccc----ccccccccchhhhhcCCCcceeecceecCCce-----
Confidence 3667888888999999999999865 6889999999755 23345678777666 69999999999987443
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceee-CCCceeeecCCCCc
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLL-DENFHVKINSYNLP 634 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl-d~~~~~kl~DFGla 634 (769)
.|+|||++.+|-+.+.+.... ... ..+..|+.+++.|+.|||++ ||||||+||+|||+ +..++++|+|||.+
T Consensus 391 --~~~v~e~l~g~ell~ri~~~~-~~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a 463 (612)
T KOG0603|consen 391 --IYLVMELLDGGELLRRIRSKP-EFC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFW 463 (612)
T ss_pred --eeeeehhccccHHHHHHHhcc-hhH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechh
Confidence 899999999998888877543 223 77778999999999999998 99999999999999 68899999999999
Q ss_pred hhhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhccccccccccccCc
Q 004195 635 LLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
+..... ..+.+++..|.+||+.....|++++|+|||||+||||++|+.|+...... .+...+ -.+
T Consensus 464 ~~~~~~-~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i-------------~~~ 529 (612)
T KOG0603|consen 464 SELERS-CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRI-------------QMP 529 (612)
T ss_pred hhCchh-hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhh-------------cCC
Confidence 776554 44556788889999999999999999999999999999999999765543 111111 111
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
.+....+..+.+|+..||+.||.+||+|+++..|+|+
T Consensus 530 ----~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 530 ----KFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred ----ccccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 1223444558999999999999999999999999999
|
|
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-33 Score=284.86 Aligned_cols=241 Identities=20% Similarity=0.262 Sum_probs=192.7
Q ss_pred cccCCceeEEEEEeC-CCcEEEEEEccccCCC---ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEEEe
Q 004195 488 MCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS---SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFE 563 (769)
Q Consensus 488 iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~---~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV~E 563 (769)
||+|+||.||++... +++.+|+|.+...... ....+..|++++++++||||+++++.+.+.. ..++|||
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-------~~~~v~e 73 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEE-------KLYLVLE 73 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCC-------eeEEEEe
Confidence 699999999999976 5899999998765322 3357889999999999999999999887533 3899999
Q ss_pred ccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhcc--C
Q 004195 564 YAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEAR--G 641 (769)
Q Consensus 564 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~--~ 641 (769)
|+++++|.+++.... .+++.....++.|+++||.|+|+. +++|+||||+||+++.++.++++|||.+...... .
T Consensus 74 ~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~ 149 (250)
T cd05123 74 YAPGGELFSHLSKEG-RFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSR 149 (250)
T ss_pred cCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCCCc
Confidence 999999999998554 689999999999999999999998 9999999999999999999999999998655332 1
Q ss_pred CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccCCCCH
Q 004195 642 KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSD 721 (769)
Q Consensus 642 ~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 721 (769)
.........|.+||...+...+.++|+||||+++||+++|+.||...........+.. . ...+....
T Consensus 150 ~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~---~--------~~~~~~~~-- 216 (250)
T cd05123 150 TNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK---D--------PLRFPEFL-- 216 (250)
T ss_pred ccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc---C--------CCCCCCCC--
Confidence 2222334467788888777789999999999999999999999975543222111110 0 11111122
Q ss_pred HHHHHHHHHHHHcCcCCCCCCCCH---HHHHHHhHh
Q 004195 722 ESLKRMMELCLRCLSNEPKDRPSV---EDTLWNLQF 754 (769)
Q Consensus 722 ~~~~~l~~li~~cl~~dP~~RPs~---~evl~~l~~ 754 (769)
...+.+++.+||..||++||++ +++++|+||
T Consensus 217 --~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 217 --SPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred --CHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 2348899999999999999999 899999986
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-33 Score=292.76 Aligned_cols=254 Identities=17% Similarity=0.216 Sum_probs=191.5
Q ss_pred CCCCcCccccCCceeEEEEEe----CCCcEEEEEEccccC----CCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCC
Q 004195 481 CFDSSSFMCDASHGQIYKGKL----TDGTLVAIRSLKMSK----KSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLD 551 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~----~~g~~vAvK~~~~~~----~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~ 551 (769)
+|+..+.||+|++|.||+++. .+++.||||.++... ....+.+.+|++++.++ +||||+++++.+....
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~-- 78 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDT-- 78 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCC--
Confidence 366788999999999999984 257899999987432 12235688899999999 5999999998876533
Q ss_pred CCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCC
Q 004195 552 DPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSY 631 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DF 631 (769)
..++||||+++|+|.+++.... .+++.....++.|+++||+|||+. +++||||||+||+++.++.++++||
T Consensus 79 -----~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df 149 (288)
T cd05583 79 -----KLHLILDYVNGGELFTHLYQRE-HFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDF 149 (288)
T ss_pred -----EEEEEEecCCCCcHHHHHhhcC-CcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEEC
Confidence 3899999999999999987543 689999999999999999999998 9999999999999999999999999
Q ss_pred CCchhhhccCCc---ceeecCCCcchhhhccCC--CCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhcccccc
Q 004195 632 NLPLLAEARGKG---SAEVSSPAKKTSVLARTE--QDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIGTDE 705 (769)
Q Consensus 632 Gla~~~~~~~~~---~~~~~~~~~~pe~~~~~~--~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~~~~ 705 (769)
|+++........ ...+...|.+||...+.. .+.++||||||+++|||+||+.|+...... ....+......
T Consensus 150 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~--- 226 (288)
T cd05583 150 GLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILK--- 226 (288)
T ss_pred ccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHc---
Confidence 998654322211 112344567788776554 688999999999999999999998532211 11111111000
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCH---HHHHHHhHhhhh
Q 004195 706 ARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSV---EDTLWNLQFATQ 757 (769)
Q Consensus 706 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~---~evl~~l~~~~~ 757 (769)
..+.....++ ..+.+++.+||+.||++|||+ .++++|+|+...
T Consensus 227 -----~~~~~~~~~~----~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~ 272 (288)
T cd05583 227 -----SKPPFPKTMS----AEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGI 272 (288)
T ss_pred -----cCCCCCcccC----HHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccC
Confidence 0111112223 347899999999999999985 566999988653
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=289.45 Aligned_cols=256 Identities=8% Similarity=0.045 Sum_probs=178.1
Q ss_pred cCCCCcCccccCCceeEEEEEeCC----CcEEEEEEccccCCCCh-----------hHHHHHHHHHhhccCCceeeEeee
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTD----GTLVAIRSLKMSKKSSP-----------HMYTYHIELISKLRHSNLVSALGH 544 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~----g~~vAvK~~~~~~~~~~-----------~~~~~Ei~~l~~l~H~nIv~l~~~ 544 (769)
+.|...+.||+|+||+||+|...+ +..+|+|.......... .....+...+..+.|+||++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 468889999999999999999653 45667775443221110 111223344566789999999997
Q ss_pred eeccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc
Q 004195 545 CLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF 624 (769)
Q Consensus 545 ~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~ 624 (769)
+..... .....++++|++. .++.+.+.... ..++..+..|+.|+++||+|||+. +|+||||||+|||++.++
T Consensus 92 ~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~~ 163 (294)
T PHA02882 92 GSFKRC---RMYYRFILLEKLV-ENTKEIFKRIK-CKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNN 163 (294)
T ss_pred eeEecC---CceEEEEEEehhc-cCHHHHHHhhc-cCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCC
Confidence 654321 1223578888875 46666665432 457888999999999999999998 999999999999999999
Q ss_pred eeeecCCCCchhhhccC---------CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchh-HHHH
Q 004195 625 HVKINSYNLPLLAEARG---------KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVV-VLVK 694 (769)
Q Consensus 625 ~~kl~DFGla~~~~~~~---------~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~-~~~~ 694 (769)
.+||+|||+|+...... .....++..|++||...+..++.++|||||||++|||++|++||..... ....
T Consensus 164 ~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~ 243 (294)
T PHA02882 164 RGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLI 243 (294)
T ss_pred cEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHH
Confidence 99999999986542211 1112244556778888888899999999999999999999999975421 1111
Q ss_pred hhhhhccccccccccccCccc-cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHh
Q 004195 695 DLLQVNIGTDEARKSIVDPAV-MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNL 752 (769)
Q Consensus 695 ~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 752 (769)
...... ....+..+.. ...+ .+.+.+++..|+..+|++||+++++.+.+
T Consensus 244 ~~~~~~-----~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 244 HAAKCD-----FIKRLHEGKIKIKNA----NKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHhHHH-----HHHHhhhhhhccCCC----CHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 100000 0001111110 1122 34488999999999999999999998754
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-32 Score=317.81 Aligned_cols=145 Identities=17% Similarity=0.295 Sum_probs=128.4
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC---hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS---PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~---~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|...+.||+|+||.||+|+.. +++.||||+++...... .+.+.+|+.+++.++||||+++++++....
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~------ 77 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSAN------ 77 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECC------
Confidence 56888899999999999999976 68999999997543222 356888999999999999999998887533
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..|+||||+++++|.+++...+ .+++..+++|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 78 -~~~lVmEy~~g~~L~~li~~~~-~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 78 -NVYLVMEYLIGGDVKSLLHIYG-YFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred -EEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 4899999999999999997544 688999999999999999999998 99999999999999999999999999975
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=282.11 Aligned_cols=228 Identities=18% Similarity=0.172 Sum_probs=178.4
Q ss_pred CCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEEEeccCCCc
Q 004195 491 ASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNET 569 (769)
Q Consensus 491 G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV~Ey~~~gs 569 (769)
|.+|.||+++.. +|+.||+|+++... .+.+|...+....||||+++++++.+.+ ..++||||+++|+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~-------~~~lv~e~~~~~~ 71 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSED-------SVFLVLQHAEGGK 71 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCC-------eEEEEEecCCCCC
Confidence 889999999975 78999999997542 2344555555667999999999987643 3899999999999
Q ss_pred hhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhccCCcceeecC
Q 004195 570 LRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSS 649 (769)
Q Consensus 570 L~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~ 649 (769)
|.+++.+.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.++++|||.+........ ......
T Consensus 72 L~~~l~~~~-~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~-~~~~~~ 146 (237)
T cd05576 72 LWSHISKFL-NIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCD-GEAVEN 146 (237)
T ss_pred HHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccccc-cCCcCc
Confidence 999987544 589999999999999999999998 999999999999999999999999998755433221 122334
Q ss_pred CCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHH
Q 004195 650 PAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMME 729 (769)
Q Consensus 650 ~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~ 729 (769)
.|++||......++.++||||+||++|||++|+.|+....... .. ..... .++.....+.+
T Consensus 147 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~-~~--------------~~~~~----~~~~~~~~~~~ 207 (237)
T cd05576 147 MYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI-NT--------------HTTLN----IPEWVSEEARS 207 (237)
T ss_pred cccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc-cc--------------ccccC----CcccCCHHHHH
Confidence 5778888877788999999999999999999998765321110 00 00001 11122344889
Q ss_pred HHHHcCcCCCCCCCCH-----HHHHHHhHh
Q 004195 730 LCLRCLSNEPKDRPSV-----EDTLWNLQF 754 (769)
Q Consensus 730 li~~cl~~dP~~RPs~-----~evl~~l~~ 754 (769)
++.+|++.||++||++ +|+++|+||
T Consensus 208 li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 208 LLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred HHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 9999999999999996 899999885
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-32 Score=296.17 Aligned_cols=202 Identities=18% Similarity=0.290 Sum_probs=166.5
Q ss_pred CCcCccccCCceeEEEEEeC-CCcEEEEEEccccC-CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEE
Q 004195 483 DSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK-KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYL 560 (769)
Q Consensus 483 ~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~l 560 (769)
.-.+.||+|+||.||+|+.+ +|+.||||.++... ....+...+|+++|++++|+|||++++.-.+... ........+
T Consensus 16 ~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~-~~~~~~~vl 94 (732)
T KOG4250|consen 16 EMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFL-GLVTRLPVL 94 (732)
T ss_pred eehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCcccc-CcccccceE
Confidence 44578999999999999965 79999999998653 3345678999999999999999999987654331 111344689
Q ss_pred EEeccCCCchhhhhcC--CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeC--CCce--eeecCCCCc
Q 004195 561 IFEYAPNETLRSFISG--PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD--ENFH--VKINSYNLP 634 (769)
Q Consensus 561 V~Ey~~~gsL~~~l~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld--~~~~--~kl~DFGla 634 (769)
|||||++|||+..+.+ +...|++.+.+.+..+++.||.|||++ +|+||||||.||++- ++|+ -||+|||.|
T Consensus 95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 9999999999999984 345799999999999999999999998 999999999999983 3343 799999999
Q ss_pred hhhhccCCcc-eeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCc
Q 004195 635 LLAEARGKGS-AEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSEN 688 (769)
Q Consensus 635 ~~~~~~~~~~-~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~ 688 (769)
+-.+++..-. ..++..|..|+.+.+ ..|+.-+|.|||||++||++||..||-..
T Consensus 172 rel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~ 227 (732)
T KOG4250|consen 172 RELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPF 227 (732)
T ss_pred ccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcC
Confidence 8877665433 344555677888774 78899999999999999999999988653
|
|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.8e-33 Score=312.43 Aligned_cols=261 Identities=19% Similarity=0.243 Sum_probs=207.9
Q ss_pred HHHHHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc---CCCChhHHHHHHHHHhhccCCceeeEeeeeecc
Q 004195 473 DELKEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS---KKSSPHMYTYHIELISKLRHSNLVSALGHCLDF 548 (769)
Q Consensus 473 ~el~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~ 548 (769)
.++.--.++|.+.++||+|+||.|..++++ +++++|+|++.+. +......|..|-++|..-..+-||.++..|.+.
T Consensus 68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~ 147 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE 147 (1317)
T ss_pred HHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc
Confidence 455556678999999999999999999986 6999999999863 345566788899999988999999999888774
Q ss_pred CCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeee
Q 004195 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKI 628 (769)
Q Consensus 549 ~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl 628 (769)
.+ +|+|||||+||||-.++.+.. .+++.....++..|+-||.-+|+. |+|||||||+|||+|..|++|+
T Consensus 148 ~~-------LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikL 216 (1317)
T KOG0612|consen 148 RY-------LYLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKL 216 (1317)
T ss_pred cc-------eEEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEee
Confidence 43 999999999999999999776 788888888999999999999999 9999999999999999999999
Q ss_pred cCCCCchhhhccCC---cceeecCCCcchhhhc-----cCCCCCCCCeeehhHHHHHHHhCCCCCCCch-hHHHHhhhhh
Q 004195 629 NSYNLPLLAEARGK---GSAEVSSPAKKTSVLA-----RTEQDDKSDVYDIGIILIEIIVGRPITSENV-VVLVKDLLQV 699 (769)
Q Consensus 629 ~DFGla~~~~~~~~---~~~~~~~~~~~pe~~~-----~~~~~~ksDVwS~Gvil~elltG~~p~~~~~-~~~~~~~~~~ 699 (769)
+|||.+..+...+. ....+++-|..||++. .+.|++.+|.||+||++|||+.|..||+.+. .+...+++..
T Consensus 217 ADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~h 296 (1317)
T KOG0612|consen 217 ADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNH 296 (1317)
T ss_pred ccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhch
Confidence 99998855543332 3345566677888764 2578999999999999999999999997654 3333333322
Q ss_pred ccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCC---HHHHHHHhHhhhh
Q 004195 700 NIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPS---VEDTLWNLQFATQ 757 (769)
Q Consensus 700 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~~l~~~~~ 757 (769)
. + .-.+ |. ..+.+++..+||.+.+. +|+.|.. ++|+-.|+||...
T Consensus 297 k----~-~l~F--P~-----~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~ 344 (1317)
T KOG0612|consen 297 K----E-SLSF--PD-----ETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGI 344 (1317)
T ss_pred h----h-hcCC--Cc-----ccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCC
Confidence 0 0 0000 10 01244558888888775 5888887 9999999999753
|
|
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.4e-32 Score=299.45 Aligned_cols=268 Identities=20% Similarity=0.326 Sum_probs=216.3
Q ss_pred CHHHHHHHhcCCCCcCccccCCceeEEEEEe-CCCcEEEEEEccccCCCChhHHHHHHHHHhhc-cCCceeeEeeeeecc
Q 004195 471 TLDELKEATDCFDSSSFMCDASHGQIYKGKL-TDGTLVAIRSLKMSKKSSPHMYTYHIELISKL-RHSNLVSALGHCLDF 548 (769)
Q Consensus 471 ~~~el~~~t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~ 548 (769)
.++-+...++-|++.+.||+|.+|.||+++. ++|+.+|||+..... ...++++.|.++++.. .|||++.++|++.-.
T Consensus 10 ~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~k~ 88 (953)
T KOG0587|consen 10 DLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFIKK 88 (953)
T ss_pred chhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEEEe
Confidence 3445556678899999999999999999995 479999999988653 4457788999999888 699999999999755
Q ss_pred CCCCCCcceEEEEEeccCCCchhhhhcC-CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceee
Q 004195 549 SLDDPSISIIYLIFEYAPNETLRSFISG-PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVK 627 (769)
Q Consensus 549 ~~~~~~~~~~~lV~Ey~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~k 627 (769)
+. -..+.+|||||||.+||..|+++. .+..+.|..+..|++++++||++||.. .++|||||-.|||+++++.+|
T Consensus 89 ~~--~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VK 163 (953)
T KOG0587|consen 89 DP--GNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVK 163 (953)
T ss_pred cC--CCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEE
Confidence 44 235679999999999999999972 255799999999999999999999999 999999999999999999999
Q ss_pred ecCCCCchhhhcc--CCcceeecCCCcchhhhccC-----CCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhc
Q 004195 628 INSYNLPLLAEAR--GKGSAEVSSPAKKTSVLART-----EQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVN 700 (769)
Q Consensus 628 l~DFGla~~~~~~--~~~~~~~~~~~~~pe~~~~~-----~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~ 700 (769)
+.|||.+...+.. ...+..+++.|++||++... .|+.++|+||+|++..||.-|.||+.+....... ...
T Consensus 164 LvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraL--F~I- 240 (953)
T KOG0587|consen 164 LVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRAL--FLI- 240 (953)
T ss_pred EeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhh--ccC-
Confidence 9999998654332 23344556677889887543 4788999999999999999999998765433221 110
Q ss_pred cccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 701 IGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 701 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
. -.|...-..+..+.+++.++|..|+.+|-.+||++.++++|++..+
T Consensus 241 -------p--RNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e 287 (953)
T KOG0587|consen 241 -------P--RNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITE 287 (953)
T ss_pred -------C--CCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCcccc
Confidence 0 1122223346678889999999999999999999999999998763
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.6e-32 Score=299.69 Aligned_cols=271 Identities=15% Similarity=0.197 Sum_probs=183.2
Q ss_pred HhcCCCCcCccccCCceeEEEEEe-----------------CCCcEEEEEEccccCCCCh--------------hHHHHH
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKL-----------------TDGTLVAIRSLKMSKKSSP--------------HMYTYH 526 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~-----------------~~g~~vAvK~~~~~~~~~~--------------~~~~~E 526 (769)
..++|++.++||+|+||+||+|.. .+++.||||++........ +.+..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999964 2356899999875432222 234457
Q ss_pred HHHHhhccCCce-----eeEeeeeeccCCCC-CCcceEEEEEeccCCCchhhhhcCCC----------------------
Q 004195 527 IELISKLRHSNL-----VSALGHCLDFSLDD-PSISIIYLIFEYAPNETLRSFISGPG---------------------- 578 (769)
Q Consensus 527 i~~l~~l~H~nI-----v~l~~~~~~~~~~~-~~~~~~~lV~Ey~~~gsL~~~l~~~~---------------------- 578 (769)
+.++.+++|.++ +++++||.....++ ...+..++||||+++|+|.++++...
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777788876654 77888886532221 12345799999999999999886321
Q ss_pred -CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhccCCcc---eeecCCCcch
Q 004195 579 -YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGS---AEVSSPAKKT 654 (769)
Q Consensus 579 -~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~~---~~~~~~~~~p 654 (769)
..++|..+..++.|+++||+|+|+. +|+||||||+||+++.++.+||+|||+++......... ...+..|++|
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 1346788899999999999999998 99999999999999999999999999986543221111 1123456777
Q ss_pred hhhccCC--------------------C--CCCCCeeehhHHHHHHHhCCC-CCCCchhHHHHhhhhhccccccccc---
Q 004195 655 SVLARTE--------------------Q--DDKSDVYDIGIILIEIIVGRP-ITSENVVVLVKDLLQVNIGTDEARK--- 708 (769)
Q Consensus 655 e~~~~~~--------------------~--~~ksDVwS~Gvil~elltG~~-p~~~~~~~~~~~~~~~~~~~~~~~~--- 708 (769)
|.+.... | ..+.||||+|||+|||++|.. |+........ +..... .....+.
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~-~~~~~~-~~~~~~r~~~ 457 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNT-ELRQYD-NDLNRWRMYK 457 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhh-HHhhcc-chHHHHHhhc
Confidence 7654322 1 235799999999999999974 5542110000 000000 0000000
Q ss_pred -cccCccccCCCCHHHHHHHHHHHHHcCcCCC---CCCCCHHHHHHHhHhhhh
Q 004195 709 -SIVDPAVMNECSDESLKRMMELCLRCLSNEP---KDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 709 -~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP---~~RPs~~evl~~l~~~~~ 757 (769)
.-.+-... +.......+++.+++..+| .+|+|++|+++|+||..+
T Consensus 458 ~~~~~~~~~----d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~~ 506 (507)
T PLN03224 458 GQKYDFSLL----DRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLPE 506 (507)
T ss_pred ccCCCcccc----cccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCCC
Confidence 00111111 1223448899999999766 689999999999999654
|
|
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-32 Score=268.17 Aligned_cols=252 Identities=19% Similarity=0.225 Sum_probs=203.1
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCCh---hHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSP---HMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~---~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|+-.+++|+|.||.|-.++.+ +|+.+|+|++++.-.-.. .....|-++|+..+||.+..+...|...+.
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~dr----- 242 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDR----- 242 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCce-----
Confidence 45777899999999999999976 799999999987633222 335568899999999999998877766443
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
++.||||+.||.|.-++.+.. .+++....-+..+|+.||.|||++ +||.||+|.+|.|+|.+|++||+|||+.+
T Consensus 243 --lCFVMeyanGGeLf~HLsrer-~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCK 316 (516)
T KOG0690|consen 243 --LCFVMEYANGGELFFHLSRER-VFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCK 316 (516)
T ss_pred --EEEEEEEccCceEeeehhhhh-cccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccch
Confidence 999999999999999998654 688888888899999999999999 99999999999999999999999999986
Q ss_pred hh--hccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCc
Q 004195 636 LA--EARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 636 ~~--~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
-. ......+.++++-|.+||++....|+..+|.|.+|||+|||+.|+.||...+.+..-+++... |-
T Consensus 317 E~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~e-----------d~ 385 (516)
T KOG0690|consen 317 EEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILME-----------DL 385 (516)
T ss_pred hcccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhh-----------hc
Confidence 42 122234456667778899999999999999999999999999999999876655444433210 11
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCC-----CHHHHHHHhHhhhh
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRP-----SVEDTLWNLQFATQ 757 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~~~~~ 757 (769)
.++....+ +...|+...+.+||.+|. .+.||.+|.+|+..
T Consensus 386 kFPr~ls~----eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v 430 (516)
T KOG0690|consen 386 KFPRTLSP----EAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASV 430 (516)
T ss_pred cCCccCCH----HHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccC
Confidence 11122233 377888899999999995 68999999998643
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-32 Score=256.74 Aligned_cols=264 Identities=17% Similarity=0.246 Sum_probs=199.6
Q ss_pred hcCCCCcCccccCCceeEEEEE-eCCCcEEEEEEccccCCCChhHHHHHHHHHhhcc-CCceeeEeeeeeccCCCCCCcc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLR-HSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
.++|++.+.+|+|.|+.||.|. ..+.+.++||.++..+ .+.+.+|+.||..++ |||||++++...++.. .
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~S-----k 108 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKDPES-----K 108 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcCccc-----c
Confidence 4578888999999999999998 4578899999998653 467999999999997 9999999999887544 3
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC-ceeeecCCCCch
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN-FHVKINSYNLPL 635 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~-~~~kl~DFGla~ 635 (769)
...||+||+.+-+...+.. .++-..+..++.++++||.|+|+. ||+|||+||.|+++|.. -..+++|+|+|.
T Consensus 109 tpaLiFE~v~n~Dfk~ly~----tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAE 181 (338)
T KOG0668|consen 109 TPSLIFEYVNNTDFKQLYP----TLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAE 181 (338)
T ss_pred CchhHhhhhccccHHHHhh----hhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHh
Confidence 4689999999887766553 577778889999999999999999 99999999999999865 569999999998
Q ss_pred hhhccCCccee-ecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCch--hHHHHhhhhhccccc-------
Q 004195 636 LAEARGKGSAE-VSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENV--VVLVKDLLQVNIGTD------- 704 (769)
Q Consensus 636 ~~~~~~~~~~~-~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~--~~~~~~~~~~~~~~~------- 704 (769)
+..++..-... ....+.+||.+.. ..|+-.-|+|||||++.+|+..+.||.... .+....+.. .++..
T Consensus 182 FYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIak-VLGt~el~~Yl~ 260 (338)
T KOG0668|consen 182 FYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAK-VLGTDELYAYLN 260 (338)
T ss_pred hcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHH-HhChHHHHHHHH
Confidence 87665543333 3345567887654 457888999999999999999987774321 122222111 11111
Q ss_pred -------c------------ccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcccc
Q 004195 705 -------E------------ARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQGLK 762 (769)
Q Consensus 705 -------~------------~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~~~ 762 (769)
+ .|..++.+.-..-. ..++++++.+.+..|-.+|+|++|++.|++|....+...
T Consensus 261 KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~----~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~~~~~ 333 (338)
T KOG0668|consen 261 KYQIDLDPQFEDILGRHSRKPWSRFINSENQHLV----SPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVREAES 333 (338)
T ss_pred HHccCCChhHhhHhhccccccHHHhCCccccccC----ChHHHHHHHHHHhhccccccchHHHhcCchHHHHHHHhh
Confidence 1 11122222111112 245889999999999999999999999999987655443
|
|
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-32 Score=282.58 Aligned_cols=249 Identities=17% Similarity=0.228 Sum_probs=200.7
Q ss_pred cCccccCCceeEEEEEeC-CCcEEEEEEccccC--CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEE
Q 004195 485 SSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK--KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLI 561 (769)
Q Consensus 485 ~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV 561 (769)
.+.+|+|.||+||-|+++ +|+.||||++.+.+ ...+.++.+|+.||++++||.||.+--.|++.+. +++|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~er-------vFVV 641 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPER-------VFVV 641 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCce-------EEEE
Confidence 589999999999999976 79999999998664 2345678999999999999999999988887554 8999
Q ss_pred EeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC---ceeeecCCCCchhhh
Q 004195 562 FEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN---FHVKINSYNLPLLAE 638 (769)
Q Consensus 562 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~---~~~kl~DFGla~~~~ 638 (769)
||-+.|.-|.-.+......|++.....+..||+.||.|||.. +|+|+||||+|||+... -.+|++|||+|+++.
T Consensus 642 MEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIg 718 (888)
T KOG4236|consen 642 MEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIG 718 (888)
T ss_pred ehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecc
Confidence 999965444444555545799998888999999999999999 99999999999999543 469999999999887
Q ss_pred ccCCc-ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccC
Q 004195 639 ARGKG-SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMN 717 (769)
Q Consensus 639 ~~~~~-~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 717 (769)
..... ...++..|.+||++..+.|+..-|+||.|||+|--+.|..||.+++. +.+.++.. .-+..|.
T Consensus 719 EksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEd--IndQIQNA-------aFMyPp~--- 786 (888)
T KOG4236|consen 719 EKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDED--INDQIQNA-------AFMYPPN--- 786 (888)
T ss_pred hhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccc--hhHHhhcc-------ccccCCC---
Confidence 66543 44556677889999999999999999999999999999999976543 22222211 0011222
Q ss_pred CCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 718 ECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 718 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
...+.....+++|...++..=++|.|.+..+.|+|...
T Consensus 787 -PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~ 824 (888)
T KOG4236|consen 787 -PWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQD 824 (888)
T ss_pred -chhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhc
Confidence 22344445899999999999999999999999999754
|
|
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-32 Score=274.54 Aligned_cols=266 Identities=16% Similarity=0.217 Sum_probs=202.3
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhcc-C-C----ceeeEeeeeeccCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLR-H-S----NLVSALGHCLDFSLD 551 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-H-~----nIv~l~~~~~~~~~~ 551 (769)
+++|.+...+|+|.||.|-.+... .+..||||+++...+ -.+...-|+++++++. + | -+|++.+++.-
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~k-YreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdy---- 162 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDK-YREAALIEIEVLQKINESDPNGKFRCVQMRDWFDY---- 162 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHH-HhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhc----
Confidence 678999999999999999999965 588999999986533 2355677999999994 2 2 47788777754
Q ss_pred CCCcceEEEEEeccCCCchhhhhcC-CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC--------
Q 004195 552 DPSISIIYLIFEYAPNETLRSFISG-PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE-------- 622 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~-------- 622 (769)
.++.++|+|.+ |-|+.+++.. +..+++...+..|+.|++++++|||+. +++|-||||+|||+-.
T Consensus 163 ---rghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~~ 235 (415)
T KOG0671|consen 163 ---RGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTYN 235 (415)
T ss_pred ---cCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEec
Confidence 34589999999 5699999985 345788899999999999999999999 9999999999999821
Q ss_pred ------------CceeeecCCCCchhhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchh
Q 004195 623 ------------NFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVV 690 (769)
Q Consensus 623 ------------~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~ 690 (769)
+..+||+|||.|....... .....+.-|++||++.+-.++.++||||+||||+|+.||...|+..+.
T Consensus 236 ~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h-s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen 314 (415)
T KOG0671|consen 236 PKKKVCFIRPLKSTAIKVIDFGSATFDHEHH-STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHEN 314 (415)
T ss_pred cCCccceeccCCCcceEEEecCCcceeccCc-ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCc
Confidence 2348999999997654433 445567788999999999999999999999999999999988775442
Q ss_pred HHHHhhhhhccccccc------------------c---------ccccCccc-c---CCCCHHHHHHHHHHHHHcCcCCC
Q 004195 691 VLVKDLLQVNIGTDEA------------------R---------KSIVDPAV-M---NECSDESLKRMMELCLRCLSNEP 739 (769)
Q Consensus 691 ~~~~~~~~~~~~~~~~------------------~---------~~~~d~~~-~---~~~~~~~~~~l~~li~~cl~~dP 739 (769)
..-...++...+..+. | ..+.++.. . -...+.+..++.+|+.+++..||
T Consensus 315 ~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP 394 (415)
T KOG0671|consen 315 LEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDP 394 (415)
T ss_pred HHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCc
Confidence 2111222222221100 0 00011100 0 01234556679999999999999
Q ss_pred CCCCCHHHHHHHhHhhhh
Q 004195 740 KDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 740 ~~RPs~~evl~~l~~~~~ 757 (769)
.+|+|+.|++.|++|+.-
T Consensus 395 ~~RiTl~EAL~HpFF~~~ 412 (415)
T KOG0671|consen 395 ARRITLREALSHPFFARL 412 (415)
T ss_pred cccccHHHHhcCHHhhcC
Confidence 999999999999999854
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-31 Score=305.74 Aligned_cols=248 Identities=22% Similarity=0.323 Sum_probs=194.8
Q ss_pred CCcCccccCCceeEEEEEeC----C----CcEEEEEEccccCC-CChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCC
Q 004195 483 DSSSFMCDASHGQIYKGKLT----D----GTLVAIRSLKMSKK-SSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDD 552 (769)
Q Consensus 483 ~~~~~iG~G~~g~Vy~~~~~----~----g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~ 552 (769)
...+.+|+|.||.|++|... . ...||||.++.... .+.+.+..|+++|..+ +|+|||.++|+|.....
T Consensus 299 ~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~-- 376 (609)
T KOG0200|consen 299 KLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGP-- 376 (609)
T ss_pred cccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCc--
Confidence 34459999999999999843 1 35799999986533 3457899999999999 59999999999987332
Q ss_pred CCcceEEEEEeccCCCchhhhhcCCC---------------CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccc
Q 004195 553 PSISIIYLIFEYAPNETLRSFISGPG---------------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITD 617 (769)
Q Consensus 553 ~~~~~~~lV~Ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~N 617 (769)
.++|+||+..|+|.++++... ..++....+.++.|||.|++||++. ++||||+-.+|
T Consensus 377 -----~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRN 448 (609)
T KOG0200|consen 377 -----LYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARN 448 (609)
T ss_pred -----eEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---Cccchhhhhhh
Confidence 899999999999999998544 3488999999999999999999999 99999999999
Q ss_pred eeeCCCceeeecCCCCchhhhccCCccee-----ecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCch-h
Q 004195 618 VLLDENFHVKINSYNLPLLAEARGKGSAE-----VSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENV-V 690 (769)
Q Consensus 618 ILld~~~~~kl~DFGla~~~~~~~~~~~~-----~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~-~ 690 (769)
||+.++..+||+|||+|+.......-... ....|++||.+....|+.|+|||||||+||||+| |..|+.+-. .
T Consensus 449 VLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~ 528 (609)
T KOG0200|consen 449 VLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPT 528 (609)
T ss_pred EEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcH
Confidence 99999999999999999854333221111 2234889999988899999999999999999999 778886522 1
Q ss_pred HHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 691 VLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
..+.+++.... +.+.|..+..++.++++.||+.+|++||++.++.+.+..
T Consensus 529 ~~l~~~l~~G~--------------r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~ 578 (609)
T KOG0200|consen 529 EELLEFLKEGN--------------RMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEK 578 (609)
T ss_pred HHHHHHHhcCC--------------CCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHH
Confidence 12222222111 111222334458899999999999999999999987765
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.9e-32 Score=306.82 Aligned_cols=271 Identities=14% Similarity=0.146 Sum_probs=172.1
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-C----CcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCC
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-D----GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD 552 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~----g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~ 552 (769)
..++|+..+.||+|+||.||+|++. + +..||||++.... ..+.+..| .+.+..+.+++.++..+..... .
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~--~~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~-~ 204 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG--AVEIWMNE--RVRRACPNSCADFVYGFLEPVS-S 204 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc--hhHHHHHH--HHHhhchhhHHHHHHhhhcccc-c
Confidence 5678999999999999999999975 5 7899999876422 11112211 1222223333333322211111 1
Q ss_pred CCcceEEEEEeccCCCchhhhhcCCCCC-------------------CCHHHHHHHHHHHHHHhcccccCCCCCccccCc
Q 004195 553 PSISIIYLIFEYAPNETLRSFISGPGYK-------------------LTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNL 613 (769)
Q Consensus 553 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~-------------------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDl 613 (769)
......++||||+++++|.+++...... .....+..++.|+++||+|||+. +|+||||
T Consensus 205 ~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDL 281 (566)
T PLN03225 205 KKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDV 281 (566)
T ss_pred ccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcC
Confidence 1234589999999999999998743211 11234567999999999999998 9999999
Q ss_pred cccceeeCC-CceeeecCCCCchhhhccC---CcceeecCCCcchhhhccC----------------------CCCCCCC
Q 004195 614 KITDVLLDE-NFHVKINSYNLPLLAEARG---KGSAEVSSPAKKTSVLART----------------------EQDDKSD 667 (769)
Q Consensus 614 Kp~NILld~-~~~~kl~DFGla~~~~~~~---~~~~~~~~~~~~pe~~~~~----------------------~~~~ksD 667 (769)
||+|||+++ ++.+||+|||+|+...... ......+..|++||.+... .++.++|
T Consensus 282 KP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D 361 (566)
T PLN03225 282 KPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD 361 (566)
T ss_pred CHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence 999999986 5899999999997543221 1122334567777754321 2456779
Q ss_pred eeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccCC------CCHHHHHHHHHHHHHcCcCCCCC
Q 004195 668 VYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNE------CSDESLKRMMELCLRCLSNEPKD 741 (769)
Q Consensus 668 VwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------~~~~~~~~l~~li~~cl~~dP~~ 741 (769)
||||||++|||+++..+++..... +...+...-.....+.....+....+ ..+.......+|+.+|++.||++
T Consensus 362 VwSlGviL~el~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~k 440 (566)
T PLN03225 362 IYSAGLIFLQMAFPNLRSDSNLIQ-FNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQ 440 (566)
T ss_pred cHHHHHHHHHHHhCcCCCchHHHH-HHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCccc
Confidence 999999999999987665533211 11111110000011111111111000 00011123568999999999999
Q ss_pred CCCHHHHHHHhHhhhh
Q 004195 742 RPSVEDTLWNLQFATQ 757 (769)
Q Consensus 742 RPs~~evl~~l~~~~~ 757 (769)
|||++|+++|+||...
T Consensus 441 R~ta~e~L~Hpff~~~ 456 (566)
T PLN03225 441 RISAKAALAHPYFDRE 456 (566)
T ss_pred CCCHHHHhCCcCcCCC
Confidence 9999999999999754
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-32 Score=277.95 Aligned_cols=261 Identities=17% Similarity=0.234 Sum_probs=195.8
Q ss_pred CCCCcCccccCCceeEEEEEe-CCCcEEEEEEccccCCCC-------hhHHHHHHHHHhhccCCceeeEeeeeeccCCCC
Q 004195 481 CFDSSSFMCDASHGQIYKGKL-TDGTLVAIRSLKMSKKSS-------PHMYTYHIELISKLRHSNLVSALGHCLDFSLDD 552 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~~~-------~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~ 552 (769)
+|-..++||+|||+.||||.. ...+.||||+-...+... .+...+|.+|.+.+.||.||++|+|+.-+..
T Consensus 464 RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd-- 541 (775)
T KOG1151|consen 464 RYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD-- 541 (775)
T ss_pred HHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc--
Confidence 455578999999999999984 467899999865432211 2456789999999999999999999964322
Q ss_pred CCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeC---CCceeeec
Q 004195 553 PSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD---ENFHVKIN 629 (769)
Q Consensus 553 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld---~~~~~kl~ 629 (769)
.++-|+|||+|.+|.-+++.+. .+++.+...|+.||+.||.||.+ ..|+|||-||||.|||+- .-|.+||.
T Consensus 542 ----sFCTVLEYceGNDLDFYLKQhk-lmSEKEARSIiMQiVnAL~YLNE-ikpPIIHYDLKPgNILLv~GtacGeIKIT 615 (775)
T KOG1151|consen 542 ----SFCTVLEYCEGNDLDFYLKQHK-LMSEKEARSIIMQIVNALKYLNE-IKPPIIHYDLKPGNILLVNGTACGEIKIT 615 (775)
T ss_pred ----cceeeeeecCCCchhHHHHhhh-hhhHHHHHHHHHHHHHHHHHHhc-cCCCeeeeccCCccEEEecCcccceeEee
Confidence 3799999999999999998665 78999999999999999999998 578999999999999994 45889999
Q ss_pred CCCCchhhhccCCcc--------eeecCCC-cchhhhcc----CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhh
Q 004195 630 SYNLPLLAEARGKGS--------AEVSSPA-KKTSVLAR----TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDL 696 (769)
Q Consensus 630 DFGla~~~~~~~~~~--------~~~~~~~-~~pe~~~~----~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~ 696 (769)
|||++++++...... ...+++| .+||.+.- .+++.|+||||.|||+|.++.|+.||+.+... ..+
T Consensus 616 DFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ--QdI 693 (775)
T KOG1151|consen 616 DFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ--QDI 693 (775)
T ss_pred ecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH--HHH
Confidence 999999887654321 1222334 34665432 35789999999999999999999999865432 222
Q ss_pred hhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 697 LQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 697 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
++..... ...++--|. -+....+..++|++|+++.-++|....++..++++....
T Consensus 694 LqeNTIl--kAtEVqFP~-----KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllPh~ 748 (775)
T KOG1151|consen 694 LQENTIL--KATEVQFPP-----KPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPHI 748 (775)
T ss_pred Hhhhchh--cceeccCCC-----CCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccchh
Confidence 2221110 011111111 011223488999999999999999999999999887543
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-31 Score=324.17 Aligned_cols=354 Identities=28% Similarity=0.401 Sum_probs=300.1
Q ss_pred CCCcchhHHHHHHHHHHHHhhcCcCccCCHHHHHHHHHHHHhcCCCC-CCCCCCCCCCCCCCCCCCCCCcceEec-CCCe
Q 004195 1 MAKPVDKLHLLVFIILSIIVSAPHSNQLQLFQYQTLVRIQQLLNYPS-VSSSFNTTTVTDFCNIEPTPSLTLVCY-EDNL 78 (769)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~k~~~~~~~-~l~~w~~~~~~~~c~~~~~~~~~v~C~-~~~v 78 (769)
|+|++..-|.+++++++++.. ..+ ..+++|+.||++||+.+.+|. .+.+|+... +||.|.| |+|. .++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~--~~c~w~g-----v~c~~~~~v 71 (968)
T PLN00113 1 MAKKGPQHCPYLIFMLFFLFL-NFS-MLHAEELELLLSFKSSINDPLKYLSNWNSSA--DVCLWQG-----ITCNNSSRV 71 (968)
T ss_pred CCCCCCCCCChHHHHHHHHHH-Hcc-CCCHHHHHHHHHHHHhCCCCcccCCCCCCCC--CCCcCcc-----eecCCCCcE
Confidence 777775533343333332222 112 225689999999999998774 578998665 8999985 9996 4689
Q ss_pred eEEEeCCCCCCCCC------------CCCCCCCCCCccccccC-CCCCCcEEEeecccccCCCCccccCCCcCceeeccC
Q 004195 79 TQLHIAGDNNNNIN------------GGLAHNFSTDTFFSTLG-SLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSS 145 (769)
Q Consensus 79 ~~l~l~~~~~~~~~------------~~l~~n~~~~~~~~~~~-~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~ 145 (769)
+.|+++++.+.+.. .+++.|.+.+.+|..+. ++++|++|+|++|+++|.+|. +.+++|++|+|++
T Consensus 72 ~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~ 149 (968)
T PLN00113 72 VSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSN 149 (968)
T ss_pred EEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcC
Confidence 99999987654321 24566767667776654 889999999999999888885 5688999999999
Q ss_pred cccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCC
Q 004195 146 NYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIP 225 (769)
Q Consensus 146 N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p 225 (769)
|.+++.+|..|+++++|++|+|++|.+.+.+|..|+++++|++|+|++|.+++.+|..++++++|+.|+|++|++++.+|
T Consensus 150 n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p 229 (968)
T PLN00113 150 NMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIP 229 (968)
T ss_pred CcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998887
Q ss_pred C-CCCCccCcEEeccCCcCCCCCccc---ccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCC
Q 004195 226 D-LRNLKNLRVFDVQDNYFGPRFPRL---HKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLP 301 (769)
Q Consensus 226 ~-l~~l~~L~~l~l~~N~l~~~~p~~---~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 301 (769)
. ++++++|+.|++++|.+.+.+|.. +.+|+.|+|++|.+.+.+ |..+..+++|++|+|++|.+.+.+|..+.+++
T Consensus 230 ~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~-p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~ 308 (968)
T PLN00113 230 YEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPI-PPSIFSLQKLISLDLSDNSLSGEIPELVIQLQ 308 (968)
T ss_pred hhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccC-chhHhhccCcCEEECcCCeeccCCChhHcCCC
Confidence 5 889999999999999999888864 568899999999999877 88999999999999999999999999999999
Q ss_pred CCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCChhhh
Q 004195 302 SITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSNEEQ 366 (769)
Q Consensus 302 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~~~~ 366 (769)
+|+.|++++|.+++.+|..+..+++|+.|++++|.+++.+|..+..+.+++.+++++|.+++..+
T Consensus 309 ~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p 373 (968)
T PLN00113 309 NLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIP 373 (968)
T ss_pred CCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCC
Confidence 99999999999999999999999999999999999999999999999999999999999887543
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=267.30 Aligned_cols=240 Identities=24% Similarity=0.353 Sum_probs=189.8
Q ss_pred CceeEEEEEeC-CCcEEEEEEccccCCCC-hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEEEeccCCCc
Q 004195 492 SHGQIYKGKLT-DGTLVAIRSLKMSKKSS-PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNET 569 (769)
Q Consensus 492 ~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~-~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV~Ey~~~gs 569 (769)
+||.||+|+.. +|+.+|+|++....... .+.+.+|++.+++++|+||+++++++.... ..++++||+++++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~-------~~~l~~e~~~~~~ 73 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDED-------KLYLVMEYCDGGD 73 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCC-------EEEEEEeCCCCCC
Confidence 58999999986 58999999998665444 678999999999999999999999987643 3899999999999
Q ss_pred hhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhccC-Ccceeec
Q 004195 570 LRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARG-KGSAEVS 648 (769)
Q Consensus 570 L~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~~-~~~~~~~ 648 (769)
|.+++.... .+++..+..++.++++|++|||+. +++|+||+|+||++++++.++++|||.+....... .......
T Consensus 74 L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~ 149 (244)
T smart00220 74 LFDLLKKRG-RLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGT 149 (244)
T ss_pred HHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCC
Confidence 999997544 389999999999999999999998 99999999999999999999999999986654331 1222234
Q ss_pred CCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCC-chhHHHHhhhhhccccccccccccCccccCCCCHHHHHHH
Q 004195 649 SPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSE-NVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRM 727 (769)
Q Consensus 649 ~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l 727 (769)
..+.+||......++.++||||||++++|+++|+.|+.. ............... ... ........++
T Consensus 150 ~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~---------~~~---~~~~~~~~~~ 217 (244)
T smart00220 150 PEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKP---------PFP---PPEWKISPEA 217 (244)
T ss_pred cCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCC---------CCc---cccccCCHHH
Confidence 456778888778889999999999999999999999865 332222221111000 000 0000023458
Q ss_pred HHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 728 MELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 728 ~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
.+++.+|+..+|++||++.++++++|+
T Consensus 218 ~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 218 KDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred HHHHHHHccCCchhccCHHHHhhCCCC
Confidence 899999999999999999999999875
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-31 Score=265.37 Aligned_cols=255 Identities=19% Similarity=0.262 Sum_probs=205.7
Q ss_pred HHHHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhc-cCCceeeEeeeeecc
Q 004195 474 ELKEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKL-RHSNLVSALGHCLDF 548 (769)
Q Consensus 474 el~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~ 548 (769)
+..+++ +|.-..+||+|+||.|..|..+ +.+.+|||++++.- .++.+--..|-++|+-- +-|.++++..++.+-
T Consensus 344 d~i~~t-DFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTm 422 (683)
T KOG0696|consen 344 DRIKAT-DFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTM 422 (683)
T ss_pred cceeec-ccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhh
Confidence 444555 5888999999999999999876 57899999998652 23334455677777665 578999999988875
Q ss_pred CCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeee
Q 004195 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKI 628 (769)
Q Consensus 549 ~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl 628 (769)
+. +|.||||+.||+|...+++-+ .+.++...-+|.+||-||-|||++ +||.||||.+|||+|.+|++||
T Consensus 423 DR-------LyFVMEyvnGGDLMyhiQQ~G-kFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi 491 (683)
T KOG0696|consen 423 DR-------LYFVMEYVNGGDLMYHIQQVG-KFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKI 491 (683)
T ss_pred hh-------eeeEEEEecCchhhhHHHHhc-ccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEe
Confidence 54 899999999999999998665 578888899999999999999999 9999999999999999999999
Q ss_pred cCCCCchh--hhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhcccccc
Q 004195 629 NSYNLPLL--AEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTDE 705 (769)
Q Consensus 629 ~DFGla~~--~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~~ 705 (769)
+|||+.+- .......+.++++-|++||.+...+|+..+|.|||||+||||+.|++||+++..+. +..+.....
T Consensus 492 ~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnv---- 567 (683)
T KOG0696|consen 492 ADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNV---- 567 (683)
T ss_pred eecccccccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccC----
Confidence 99999853 33334455677788899999999999999999999999999999999998765443 333333221
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCC-----HHHHHHHhHhhh
Q 004195 706 ARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPS-----VEDTLWNLQFAT 756 (769)
Q Consensus 706 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~l~~~~ 756 (769)
.++...+.+..+++...+.+.|.+|.- -.+|-.|++|..
T Consensus 568 ------------syPKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~ 611 (683)
T KOG0696|consen 568 ------------SYPKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRR 611 (683)
T ss_pred ------------cCcccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhh
Confidence 244555666889999999999999953 467888888754
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-30 Score=240.01 Aligned_cols=195 Identities=17% Similarity=0.235 Sum_probs=157.7
Q ss_pred CCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-CChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCCcceEE
Q 004195 483 DSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-SSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 483 ~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
.....||+|++|.|-+-++. +|...|+|+++..-. +..++..+|+.+..+- .+|.+|+++|.+.+. ..++
T Consensus 49 ~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~re-------gdvw 121 (282)
T KOG0984|consen 49 VGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFRE-------GDVW 121 (282)
T ss_pred hhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhcc-------ccEE
Confidence 34578999999999988865 799999999986532 2335677888876554 799999999987652 3389
Q ss_pred EEEeccCCCchhhhhc---CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 560 LIFEYAPNETLRSFIS---GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
+.||.|. -||..+.+ ..+..+++...-+||..|.+||.|||++ ..+||||+||+|||++.+|++|++|||++-.
T Consensus 122 IcME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~ 198 (282)
T KOG0984|consen 122 ICMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNILINYDGQVKICDFGISGY 198 (282)
T ss_pred EeHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEEEccCCcEEEccccccee
Confidence 9999996 48877665 4555789999999999999999999987 4799999999999999999999999999855
Q ss_pred hhccC-CcceeecCCCcchhhhc----cCCCCCCCCeeehhHHHHHHHhCCCCCCC
Q 004195 637 AEARG-KGSAEVSSPAKKTSVLA----RTEQDDKSDVYDIGIILIEIIVGRPITSE 687 (769)
Q Consensus 637 ~~~~~-~~~~~~~~~~~~pe~~~----~~~~~~ksDVwS~Gvil~elltG~~p~~~ 687 (769)
..+.- .+...+..+|++||.+. ...|+.|+||||+|+.+.||.+++.|++.
T Consensus 199 L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~ 254 (282)
T KOG0984|consen 199 LVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES 254 (282)
T ss_pred ehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence 43332 22245567888887653 34789999999999999999999999864
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-29 Score=260.02 Aligned_cols=134 Identities=19% Similarity=0.278 Sum_probs=114.7
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhcc-----C---CceeeEeeeeeccCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLR-----H---SNLVSALGHCLDFSL 550 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-----H---~nIv~l~~~~~~~~~ 550 (769)
.+|.+.++||-|.|++||.|... +.+.||+|+.+... .-.+....||++|++++ | .+||+|+++|..
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkh--- 153 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKH--- 153 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeecccee---
Confidence 57888999999999999999964 68899999998543 33466788999999984 2 379999999875
Q ss_pred CCCCcceEEEEEeccCCCchhhhhc-CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceee
Q 004195 551 DDPSISIIYLIFEYAPNETLRSFIS-GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLL 620 (769)
Q Consensus 551 ~~~~~~~~~lV~Ey~~~gsL~~~l~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl 620 (769)
.+|++.|+++|+|+. |.+|-.+|. ...+.++...+++|++||+.||.|||..| +|||-||||+|||+
T Consensus 154 sGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 154 SGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL 221 (590)
T ss_pred cCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence 456789999999999 678888887 33346899999999999999999999998 99999999999997
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=6e-30 Score=269.65 Aligned_cols=262 Identities=16% Similarity=0.199 Sum_probs=195.7
Q ss_pred HHHHHHHhc---CCCCcCccccCCceeEEEEE-eCCCcEEEEEEccccCC---CChhHHHHHHHHHhhccCCceeeEeee
Q 004195 472 LDELKEATD---CFDSSSFMCDASHGQIYKGK-LTDGTLVAIRSLKMSKK---SSPHMYTYHIELISKLRHSNLVSALGH 544 (769)
Q Consensus 472 ~~el~~~t~---~f~~~~~iG~G~~g~Vy~~~-~~~g~~vAvK~~~~~~~---~~~~~~~~Ei~~l~~l~H~nIv~l~~~ 544 (769)
|-.|.+|.- -|...+.||-|+||.|..++ .++...+|+|.+++.+. ......+.|-+||+....+-||+||..
T Consensus 618 YiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyyS 697 (1034)
T KOG0608|consen 618 YIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYS 697 (1034)
T ss_pred HHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEE
Confidence 344555543 37889999999999999998 55688999999986642 223456789999999999999999988
Q ss_pred eeccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc
Q 004195 545 CLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF 624 (769)
Q Consensus 545 ~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~ 624 (769)
|.+.+. +|+||||++|||+..+|.+-+ .+++.....++.++.-|+++.|.. |+|||||||+|||||.+|
T Consensus 698 FQDkdn-------LYFVMdYIPGGDmMSLLIrmg-IFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdG 766 (1034)
T KOG0608|consen 698 FQDKDN-------LYFVMDYIPGGDMMSLLIRMG-IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDG 766 (1034)
T ss_pred eccCCc-------eEEEEeccCCccHHHHHHHhc-cCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCC
Confidence 877443 999999999999999988665 577777777778999999999999 999999999999999999
Q ss_pred eeeecCCCCchh---------hhccCC-----------------------------------cceeecCCCcchhhhccC
Q 004195 625 HVKINSYNLPLL---------AEARGK-----------------------------------GSAEVSSPAKKTSVLART 660 (769)
Q Consensus 625 ~~kl~DFGla~~---------~~~~~~-----------------------------------~~~~~~~~~~~pe~~~~~ 660 (769)
++|+.|||+..- +..+.. ....++.-|.+||++.+.
T Consensus 767 HIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~ 846 (1034)
T KOG0608|consen 767 HIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLART 846 (1034)
T ss_pred ceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhccc
Confidence 999999999631 111000 112355667889999999
Q ss_pred CCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCC
Q 004195 661 EQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPK 740 (769)
Q Consensus 661 ~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~ 740 (769)
.|+.-+|.||.|||||||+.|++||-.+....... ....|...++-......+.+ ..++|.+.+ -+++
T Consensus 847 g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~-------kv~nw~~~l~~~~~~~ls~e----~~~li~kLc-~sad 914 (1034)
T KOG0608|consen 847 GYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQY-------KVINWRNFLHIPYQGNLSKE----ALDLIQKLC-CSAD 914 (1034)
T ss_pred CccccchhhHhhHHHHHHhhCCCCccCCCCCccee-------eeeehhhccccccccccCHH----HHHHHHHHh-cChh
Confidence 99999999999999999999999996543221111 01123334443333445555 445544322 2466
Q ss_pred CCC---CHHHHHHHhHhhh
Q 004195 741 DRP---SVEDTLWNLQFAT 756 (769)
Q Consensus 741 ~RP---s~~evl~~l~~~~ 756 (769)
.|. -++||-.|+||..
T Consensus 915 ~RLGkng~d~vKaHpfFkg 933 (1034)
T KOG0608|consen 915 SRLGKNGADQVKAHPFFKG 933 (1034)
T ss_pred hhhcccchhhhhcCccccc
Confidence 665 4677999999864
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-30 Score=281.52 Aligned_cols=246 Identities=19% Similarity=0.326 Sum_probs=185.9
Q ss_pred CCCcCccccCCcee-EEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCCcceEE
Q 004195 482 FDSSSFMCDASHGQ-IYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 482 f~~~~~iG~G~~g~-Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
|...+++|.|+.|+ ||+|.++ |+.||||++-.. ...-..+|+..|+.- +|||||++++.-.+ ..+.|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~E~d-------~qF~Y 579 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCSEQD-------RQFLY 579 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeC-CceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEeeccC-------CceEE
Confidence 56677899999975 7999995 789999999633 234578999999887 59999999765444 34589
Q ss_pred EEEeccCCCchhhhhcCCCCCCCH---HHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC---C--ceeeecCC
Q 004195 560 LIFEYAPNETLRSFISGPGYKLTW---VQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE---N--FHVKINSY 631 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~~~~l~~---~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---~--~~~kl~DF 631 (769)
|..|.|. .+|.+++...+..... .....+..|+++||++||+. +||||||||.||||+. + ..++|+||
T Consensus 580 IalELC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDf 655 (903)
T KOG1027|consen 580 IALELCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDF 655 (903)
T ss_pred EEehHhh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEeccc
Confidence 9999996 6999999863211111 33466788999999999998 9999999999999965 3 57999999
Q ss_pred CCchhhhccCC-----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhC-CCCCCCchhHHHHhhhhhcccccc
Q 004195 632 NLPLLAEARGK-----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVG-RPITSENVVVLVKDLLQVNIGTDE 705 (769)
Q Consensus 632 Gla~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG-~~p~~~~~~~~~~~~~~~~~~~~~ 705 (769)
|+++....+.. ....++.+|.+||.+....-+.++||||+|||+|..++| ..||++...... .++....
T Consensus 656 glsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~-NIl~~~~---- 730 (903)
T KOG1027|consen 656 GLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA-NILTGNY---- 730 (903)
T ss_pred ccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhh-hhhcCcc----
Confidence 99976654332 334566789999999888888899999999999999996 789986543322 1111110
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 706 ARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 706 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
....+ +..+++ +..+||.+|+.++|..||++.+|+.||.|..
T Consensus 731 ~L~~L-------~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~ 772 (903)
T KOG1027|consen 731 TLVHL-------EPLPDC--EAKDLISRMLNPDPQLRPSATDVLNHPLFWD 772 (903)
T ss_pred ceeee-------ccCchH--HHHHHHHHhcCCCcccCCCHHHHhCCCccCC
Confidence 00000 011111 5889999999999999999999999999854
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-30 Score=268.51 Aligned_cols=250 Identities=16% Similarity=0.208 Sum_probs=203.7
Q ss_pred CCcCccccCCceeEEEEEeCC-CcEEEEEEccccCC---CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 483 DSSSFMCDASHGQIYKGKLTD-GTLVAIRSLKMSKK---SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 483 ~~~~~iG~G~~g~Vy~~~~~~-g~~vAvK~~~~~~~---~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
+....||-||||.|-.++... ...+|+|.+++... ...+....|-.||...+.|.||++|-.|.+..+ +
T Consensus 423 ~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~ky-------v 495 (732)
T KOG0614|consen 423 KRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKY-------V 495 (732)
T ss_pred hhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchh-------h
Confidence 345789999999999999764 33589998876532 334557789999999999999999999887555 8
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
|+.||-|-||.+...++..+ .++..+...++..+.+|++|||++ +||.|||||+|.++|.+|-+|+.|||+|+.+.
T Consensus 496 YmLmEaClGGElWTiLrdRg-~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~ 571 (732)
T KOG0614|consen 496 YMLMEACLGGELWTILRDRG-SFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIG 571 (732)
T ss_pred hhhHHhhcCchhhhhhhhcC-CcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhc
Confidence 99999999999999999776 688888888999999999999999 99999999999999999999999999998876
Q ss_pred ccCCcc-eeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccC
Q 004195 639 ARGKGS-AEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMN 717 (769)
Q Consensus 639 ~~~~~~-~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 717 (769)
.+..+- .++++-|.+||.+..+.-+..+|.||+|+++|||+||+|||...........+...+.. -
T Consensus 572 ~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~-------------i 638 (732)
T KOG0614|consen 572 SGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDK-------------I 638 (732)
T ss_pred cCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhh-------------h
Confidence 655443 45556667899998888999999999999999999999999876554433333222111 0
Q ss_pred CCCHHHHHHHHHHHHHcCcCCCCCCCC-----HHHHHHHhHhhh
Q 004195 718 ECSDESLKRMMELCLRCLSNEPKDRPS-----VEDTLWNLQFAT 756 (769)
Q Consensus 718 ~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~l~~~~ 756 (769)
++|....+...+++++.+..+|.+|.- +.||-+|-||..
T Consensus 639 ~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~g 682 (732)
T KOG0614|consen 639 EFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEG 682 (732)
T ss_pred hcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhc
Confidence 223333445788999999999999975 899999999853
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-30 Score=247.05 Aligned_cols=266 Identities=19% Similarity=0.282 Sum_probs=195.1
Q ss_pred CCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC--CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 482 FDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK--KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
.+..+-||-|+||.||.++++ +|+.||.|++...- -...+.+.+|++++.-.+|.|+...++...-...+ -..++
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~d--fFqEi 132 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPS--FFQEL 132 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCch--HHHHH
Confidence 345688999999999999976 89999999986432 22346789999999999999999988876432211 12347
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
|+|+|.|. .+|+..+-.+. .++-..++-+..||++||.|||+. +|.||||||.|.|++.+...||+|||+++..+
T Consensus 133 YV~TELmQ-SDLHKIIVSPQ-~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee 207 (449)
T KOG0664|consen 133 YVLTELMQ-SDLHKIIVSPQ-ALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWD 207 (449)
T ss_pred HHHHHHHH-hhhhheeccCC-CCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccc
Confidence 89999995 58998887655 788888888999999999999999 99999999999999999999999999998765
Q ss_pred ccC---CcceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccc---------
Q 004195 639 ARG---KGSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDE--------- 705 (769)
Q Consensus 639 ~~~---~~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~--------- 705 (769)
... .+...++.+|++||.+++. .|+.+.||||.|||+.|++.++..|.........+++...++.+.
T Consensus 208 ~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACE 287 (449)
T KOG0664|consen 208 QRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACE 287 (449)
T ss_pred hhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhh
Confidence 433 2334566778889987764 689999999999999999998877764332222222221111110
Q ss_pred -ccccccC-----cccc--C--CCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 706 -ARKSIVD-----PAVM--N--ECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 706 -~~~~~~d-----~~~~--~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
....++. |.+. . ..+...-.+..++..+++..||++|.+..+.+.|++.
T Consensus 288 GAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~ 346 (449)
T KOG0664|consen 288 GAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYL 346 (449)
T ss_pred hhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccc
Confidence 0000111 1110 0 0111222346678889999999999999999998874
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.9e-29 Score=248.74 Aligned_cols=260 Identities=19% Similarity=0.307 Sum_probs=200.4
Q ss_pred CHHHHHHHhcCCCCcCccccCCceeEEEEEeCC------CcEEEEEEccccC-CCChhHHHHHHHHHhhccCCceeeEee
Q 004195 471 TLDELKEATDCFDSSSFMCDASHGQIYKGKLTD------GTLVAIRSLKMSK-KSSPHMYTYHIELISKLRHSNLVSALG 543 (769)
Q Consensus 471 ~~~el~~~t~~f~~~~~iG~G~~g~Vy~~~~~~------g~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~ 543 (769)
...|+.-...++....++-+|.||.||+|.+.+ .+.|-||.++... .-....+..|.-.+..+.|||+.++.+
T Consensus 275 r~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~ 354 (563)
T KOG1024|consen 275 RLQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLG 354 (563)
T ss_pred hHHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeE
Confidence 345666667778888999999999999996542 3456778776432 122345778888899999999999999
Q ss_pred eeeccCCCCCCcceEEEEEeccCCCchhhhhc-----C--CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCcccc
Q 004195 544 HCLDFSLDDPSISIIYLIFEYAPNETLRSFIS-----G--PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKIT 616 (769)
Q Consensus 544 ~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~-----~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~ 616 (769)
++.+.. ...+++|.++.-|+|..++. + ....++-.+...++.|++.|++|||.+ +|||.||..+
T Consensus 355 V~ie~~------~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaR 425 (563)
T KOG1024|consen 355 VSIEDY------ATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAAR 425 (563)
T ss_pred EEeecc------CcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhh
Confidence 998632 23689999999999999997 2 234567778889999999999999999 9999999999
Q ss_pred ceeeCCCceeeecCCCCchhhhccCCcc----eeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhH
Q 004195 617 DVLLDENFHVKINSYNLPLLAEARGKGS----AEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVV 691 (769)
Q Consensus 617 NILld~~~~~kl~DFGla~~~~~~~~~~----~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~ 691 (769)
|.++|+..++|++|=.+++..-+.+... ..-...|+.+|.+....|+.++|||||||+||||+| |+.|+.+-+..
T Consensus 426 NCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPf 505 (563)
T KOG1024|consen 426 NCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPF 505 (563)
T ss_pred cceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHH
Confidence 9999999999999999987553333211 112335778999999999999999999999999998 89998765444
Q ss_pred HHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 692 LVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
.....+...+. +.. +-.||++ +..++.-||+..|++||++++++..+.
T Consensus 506 Em~~ylkdGyR-------laQ---P~NCPDe----Lf~vMacCWallpeeRPsf~Qlv~cLs 553 (563)
T KOG1024|consen 506 EMEHYLKDGYR-------LAQ---PFNCPDE----LFTVMACCWALLPEERPSFSQLVICLS 553 (563)
T ss_pred HHHHHHhccce-------ecC---CCCCcHH----HHHHHHHHHhcCcccCCCHHHHHHHHH
Confidence 33333221111 111 1245555 899999999999999999999998775
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-29 Score=247.35 Aligned_cols=266 Identities=17% Similarity=0.196 Sum_probs=194.1
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC--CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK--KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
+|.....+|.|.- .|-.|... .++.||+|++.... ....+...+|...+..+.|+||++++.++.-. ........
T Consensus 18 Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~-~~l~~~~e 95 (369)
T KOG0665|consen 18 RYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQ-KTLEEFQE 95 (369)
T ss_pred eeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCcc-ccHHHHHh
Confidence 4555677888887 66666544 58899999886442 23346788999999999999999999988532 21223356
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
+|+|||||. ++|...+.. .++..+...|..|++.|++|||+. +|+||||||+||++..+..+||.|||+|+..
T Consensus 96 ~y~v~e~m~-~nl~~vi~~---elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~ar~e 168 (369)
T KOG0665|consen 96 VYLVMELMD-ANLCQVILM---ELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLARTE 168 (369)
T ss_pred HHHHHHhhh-hHHHHHHHH---hcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchhhccc
Confidence 899999996 699998872 478889999999999999999999 9999999999999999999999999999765
Q ss_pred hcc-CCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchh-HHHHhhhhhccc-------------
Q 004195 638 EAR-GKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVV-VLVKDLLQVNIG------------- 702 (769)
Q Consensus 638 ~~~-~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~-~~~~~~~~~~~~------------- 702 (769)
... ..+....+..|.+||++.+..|.+.+||||.||++.||++|+-.|.+... +...+.++..-.
T Consensus 169 ~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~ 248 (369)
T KOG0665|consen 169 DTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTV 248 (369)
T ss_pred CcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHH
Confidence 444 23334455677889999988899999999999999999999966654321 111111110000
Q ss_pred -----ccc-----ccccc-cCccccC--CCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 703 -----TDE-----ARKSI-VDPAVMN--ECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 703 -----~~~-----~~~~~-~d~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
..+ ...+. .|..+.. +.++-....+.+++.+|+..||++|.+++++|+|+++.
T Consensus 249 r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 249 RNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred HHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 000 00011 1111110 11122334578899999999999999999999999985
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-29 Score=267.17 Aligned_cols=257 Identities=19% Similarity=0.280 Sum_probs=206.3
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
.++|+....+|+|.||.|||++.. .++..|||.++..-..+-.-.+.|+-+++..+|||||.++|.|...+.
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dk------- 86 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDK------- 86 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcC-------
Confidence 457888899999999999999965 799999999998766666778889999999999999999999876444
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.++.||||.+|+|++.-+..+ ++++.++..+++...+||+|||+. +-+|||||-.||++.+.|.+|++|||.+-.+
T Consensus 87 lwicMEycgggslQdiy~~Tg-plselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqi 162 (829)
T KOG0576|consen 87 LWICMEYCGGGSLQDIYHVTG-PLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQI 162 (829)
T ss_pred cEEEEEecCCCcccceeeecc-cchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhh
Confidence 899999999999999988665 799999999999999999999999 8899999999999999999999999998544
Q ss_pred hcc--CCcceeecCCCcchhhhc---cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccC
Q 004195 638 EAR--GKGSAEVSSPAKKTSVLA---RTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVD 712 (769)
Q Consensus 638 ~~~--~~~~~~~~~~~~~pe~~~---~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 712 (769)
... +.....++.+|++||+.. .+.|..++|||+.|+...|+---++|..+-.......++... .++
T Consensus 163 tati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS---------~~q 233 (829)
T KOG0576|consen 163 TATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKS---------GFQ 233 (829)
T ss_pred hhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhcc---------CCC
Confidence 322 223344566778888653 567999999999999999998877776543333333322211 122
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 713 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
|.-.. -...+.+.+.++++.|+.++|++||+++..+.|++...
T Consensus 234 pp~lk-Dk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~ 276 (829)
T KOG0576|consen 234 PPTLK-DKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQ 276 (829)
T ss_pred CCccc-CCccchHHHHHHHHHHhcCCCccCCChhhheeceeecc
Confidence 22111 12345566889999999999999999999999887543
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.2e-29 Score=257.04 Aligned_cols=277 Identities=16% Similarity=0.228 Sum_probs=209.7
Q ss_pred CccccCHHHHHHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhcc------CCce
Q 004195 466 AYRTFTLDELKEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLR------HSNL 538 (769)
Q Consensus 466 ~~~~~~~~el~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~------H~nI 538 (769)
+|-.+.+.|+.. ..|.+....|+|-|++|.+|+.. .|..||||+|+.... ..+.=.+|++||++|. --|+
T Consensus 420 GYYrv~igE~LD--~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~-M~KtGl~EleiLkKL~~AD~Edk~Hc 496 (752)
T KOG0670|consen 420 GYYRVRIGELLD--SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV-MHKTGLKELEILKKLNDADPEDKFHC 496 (752)
T ss_pred ceEEEehhhhhc--ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH-HhhhhhHHHHHHHHhhccCchhhhHH
Confidence 444555666653 47989999999999999999976 488999999986532 2344567999999994 3488
Q ss_pred eeEeeeeeccCCCCCCcceEEEEEeccCCCchhhhhcCCC--CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCcccc
Q 004195 539 VSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPG--YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKIT 616 (769)
Q Consensus 539 v~l~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~ 616 (769)
++++-.|... +|+|||+|-.. .+|.+++++.+ ..|....+..++.|+.-||..|... +|+|.||||.
T Consensus 497 lrl~r~F~hk-------nHLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPD 565 (752)
T KOG0670|consen 497 LRLFRHFKHK-------NHLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPD 565 (752)
T ss_pred HHHHHHhhhc-------ceeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCcc
Confidence 8888877753 45999999884 69999998433 3577889999999999999999988 9999999999
Q ss_pred ceeeCCC-ceeeecCCCCchhhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHh
Q 004195 617 DVLLDEN-FHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKD 695 (769)
Q Consensus 617 NILld~~-~~~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~ 695 (769)
|||+++. ...||||||.|..+....-+...+...|.+||++.+..|+...|+||.||.||||.||+..|.+........
T Consensus 566 NiLVNE~k~iLKLCDfGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLr 645 (752)
T KOG0670|consen 566 NILVNESKNILKLCDFGSASFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLR 645 (752)
T ss_pred ceEeccCcceeeeccCccccccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHH
Confidence 9999875 568999999998877666555556677889999999999999999999999999999998776643322221
Q ss_pred h-hhhcccccc---------------------------------ccccccCcc------cc--CCCC---HHHHHHHHHH
Q 004195 696 L-LQVNIGTDE---------------------------------ARKSIVDPA------VM--NECS---DESLKRMMEL 730 (769)
Q Consensus 696 ~-~~~~~~~~~---------------------------------~~~~~~d~~------~~--~~~~---~~~~~~l~~l 730 (769)
+ +...-..+. .+...+.|. +. +.++ +....++.+|
T Consensus 646 l~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdL 725 (752)
T KOG0670|consen 646 LFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDL 725 (752)
T ss_pred HHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHH
Confidence 1 111100000 001111220 10 1122 3456778999
Q ss_pred HHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 731 CLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 731 i~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
+.+|+..||++|.|..++|+|+++..
T Consensus 726 Ldkml~LdP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 726 LDKMLILDPEKRITVNQALKHPFITE 751 (752)
T ss_pred HHHHhccChhhcCCHHHHhcCCcccC
Confidence 99999999999999999999999763
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-27 Score=235.56 Aligned_cols=209 Identities=27% Similarity=0.455 Sum_probs=176.5
Q ss_pred cccCCceeEEEEEeC-CCcEEEEEEccccCCC-ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEEEecc
Q 004195 488 MCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS-SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYA 565 (769)
Q Consensus 488 iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV~Ey~ 565 (769)
||+|++|.||++... +|+.+++|++...... ..+.+.+|++.++.++|++|+++++++.... ..++++||+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~-------~~~~~~e~~ 73 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDEN-------HLYLVMEYC 73 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCC-------eEEEEEecC
Confidence 689999999999976 4899999999855332 2467999999999999999999999987643 389999999
Q ss_pred CCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC-CceeeecCCCCchhhhccC--C
Q 004195 566 PNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE-NFHVKINSYNLPLLAEARG--K 642 (769)
Q Consensus 566 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~-~~~~kl~DFGla~~~~~~~--~ 642 (769)
++++|.+++......+++..+..++.+++++++|||+. +++|+||+|.||+++. ++.++++|||.+....... .
T Consensus 74 ~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~ 150 (215)
T cd00180 74 EGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLL 150 (215)
T ss_pred CCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchh
Confidence 99999999985534689999999999999999999999 9999999999999999 8999999999986554332 2
Q ss_pred cceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccCCCCH
Q 004195 643 GSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSD 721 (769)
Q Consensus 643 ~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 721 (769)
........+.+||..... .++.++|+|++|++++++
T Consensus 151 ~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------- 187 (215)
T cd00180 151 KTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------- 187 (215)
T ss_pred hcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------------
Confidence 223344556677777665 788999999999999999
Q ss_pred HHHHHHHHHHHHcCcCCCCCCCCHHHHHHHh
Q 004195 722 ESLKRMMELCLRCLSNEPKDRPSVEDTLWNL 752 (769)
Q Consensus 722 ~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 752 (769)
..+.+++.+|++.+|++||++.++++++
T Consensus 188 ---~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 ---PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred ---HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 1277899999999999999999999764
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-27 Score=232.73 Aligned_cols=254 Identities=17% Similarity=0.214 Sum_probs=195.8
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCCh---hHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSP---HMYTYHIELISKL-RHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~---~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~ 553 (769)
.++|....+||+|+|+.|..+++. +.+.+|+|++++.-..+. .-.+.|-.+..+. +||.+|.+..+|.+.+
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtes---- 324 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTES---- 324 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccc----
Confidence 356888999999999999999975 688999999987643332 2345677777665 6999999999887644
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
.+++|.||++||+|.-++++.. .+++.....+..+|+-||.|||+. |||.||+|..|+|+|.+|++|+.|||+
T Consensus 325 ---rlffvieyv~ggdlmfhmqrqr-klpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygm 397 (593)
T KOG0695|consen 325 ---RLFFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGM 397 (593)
T ss_pred ---eEEEEEEEecCcceeeehhhhh-cCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccch
Confidence 3899999999999998887554 789998888999999999999999 999999999999999999999999999
Q ss_pred chhh--hccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCch----hH-HHHhhhhhccccccc
Q 004195 634 PLLA--EARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENV----VV-LVKDLLQVNIGTDEA 706 (769)
Q Consensus 634 a~~~--~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~----~~-~~~~~~~~~~~~~~~ 706 (769)
.+.- ......+.++++.|.+||.+.+..|+..+|.|++||+++||+.|+.||+-.. .+ ....+.+..+
T Consensus 398 cke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvil----- 472 (593)
T KOG0695|consen 398 CKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVIL----- 472 (593)
T ss_pred hhcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHh-----
Confidence 8643 2223445567778889999999999999999999999999999999996311 11 1111111111
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCC------CHHHHHHHhHhh
Q 004195 707 RKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRP------SVEDTLWNLQFA 755 (769)
Q Consensus 707 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP------s~~evl~~l~~~ 755 (769)
...+ ..+...+.....++..-+.+||.+|. -+.++-.|.+|.
T Consensus 473 -----ekqi--riprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr 520 (593)
T KOG0695|consen 473 -----EKQI--RIPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFR 520 (593)
T ss_pred -----hhcc--cccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhh
Confidence 0111 11222333456677888999999985 477888888875
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.6e-27 Score=247.20 Aligned_cols=196 Identities=17% Similarity=0.209 Sum_probs=169.7
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC------C--hhHHHHHHHHHhhcc---CCceeeEeeeeec
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS------S--PHMYTYHIELISKLR---HSNLVSALGHCLD 547 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~------~--~~~~~~Ei~~l~~l~---H~nIv~l~~~~~~ 547 (769)
.+|...+.+|.|+||.|+.|.++ +...|+||.+.+.+.- + --..-.||+||..++ |+||++++++|++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 35888999999999999999987 5678999999765311 1 113556999999997 9999999999998
Q ss_pred cCCCCCCcceEEEEEec-cCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCcee
Q 004195 548 FSLDDPSISIIYLIFEY-APNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHV 626 (769)
Q Consensus 548 ~~~~~~~~~~~~lV~Ey-~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ 626 (769)
++. +||+||- -++-+|++++.... .+++.+...|++||+-|+++||+. +|||||||-+|+.+|.+|-+
T Consensus 641 dd~-------yyl~te~hg~gIDLFd~IE~kp-~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~ 709 (772)
T KOG1152|consen 641 DDY-------YYLETEVHGEGIDLFDFIEFKP-RMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFV 709 (772)
T ss_pred CCe-------eEEEecCCCCCcchhhhhhccC-ccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeE
Confidence 665 8999996 46679999998554 699999999999999999999999 99999999999999999999
Q ss_pred eecCCCCchhhhccCCcceeecCCCcchhhhccCCC-CCCCCeeehhHHHHHHHhCCCCCC
Q 004195 627 KINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQ-DDKSDVYDIGIILIEIIVGRPITS 686 (769)
Q Consensus 627 kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~~~~-~~ksDVwS~Gvil~elltG~~p~~ 686 (769)
|++|||.|.+...+......++..|.+||++.+.+| +..-|||++||+||.++....||.
T Consensus 710 klidfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 710 KLIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred EEeeccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 999999998877776667777888999999988887 778999999999999998888775
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.3e-27 Score=225.52 Aligned_cols=255 Identities=16% Similarity=0.247 Sum_probs=184.5
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
+.|.+.+.+|+|.||.+-.++++ ..+.+|+|.+... ....++|.+|..---.+ .|.||+.-|++.... .+.
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt------~d~ 96 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQT------SDA 96 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhc------Cce
Confidence 45888899999999999999987 5789999998754 33457899998765555 599999888765432 234
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceee-C-CCceeeecCCCCch
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLL-D-ENFHVKINSYNLPL 635 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl-d-~~~~~kl~DFGla~ 635 (769)
++.++||+|.|||.+-+...+ +.+....+++.|++.|+.|||+. ++||||||.+|||+ + +..++|++|||..+
T Consensus 97 YvF~qE~aP~gdL~snv~~~G--igE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~ 171 (378)
T KOG1345|consen 97 YVFVQEFAPRGDLRSNVEAAG--IGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTR 171 (378)
T ss_pred EEEeeccCccchhhhhcCccc--ccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeeccccc
Confidence 789999999999999887654 77888999999999999999999 99999999999999 3 34579999999986
Q ss_pred hhhccCCcceeecCCCcchhhhccC-----CCCCCCCeeehhHHHHHHHhCCCCCCCchhH--HHHhhhhhccccccccc
Q 004195 636 LAEARGKGSAEVSSPAKKTSVLART-----EQDDKSDVYDIGIILIEIIVGRPITSENVVV--LVKDLLQVNIGTDEARK 708 (769)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~pe~~~~~-----~~~~ksDVwS~Gvil~elltG~~p~~~~~~~--~~~~~~~~~~~~~~~~~ 708 (769)
....... ...+..+|.+||..... ...+.+|||.||+|+|.++||++|+...... ...+|.++........
T Consensus 172 k~g~tV~-~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~- 249 (378)
T KOG1345|consen 172 KVGTTVK-YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPAL- 249 (378)
T ss_pred ccCceeh-hhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccC-
Confidence 4432211 12234456666654322 3478899999999999999999999754322 2223333222111111
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCC---CCHHHHHHHhHhhh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDR---PSVEDTLWNLQFAT 756 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Ps~~evl~~l~~~~ 756 (769)
|.....+.+ .+.++.++-+.++|++| -+.+.-.+.+|.-.
T Consensus 250 ----P~~F~~fs~----~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E~ 292 (378)
T KOG1345|consen 250 ----PKKFNPFSE----KALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKEK 292 (378)
T ss_pred ----chhhcccCH----HHHHHHHHhcCCcccccchhHHHHHHHHHHHHHh
Confidence 111122333 37778889999999999 56666666677543
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.8e-26 Score=230.93 Aligned_cols=196 Identities=23% Similarity=0.374 Sum_probs=165.6
Q ss_pred CCCcCccccCCceeEEEEEeCC-CcEEEEEEccccCCC-ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 482 FDSSSFMCDASHGQIYKGKLTD-GTLVAIRSLKMSKKS-SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~~-g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
|...+.||+|++|.||+|...+ ++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++.... ..+
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~-------~~~ 73 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPE-------PLY 73 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCC-------ceE
Confidence 4567889999999999999874 899999999865444 5678899999999999999999999987643 389
Q ss_pred EEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhc
Q 004195 560 LIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEA 639 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~ 639 (769)
+++||+++++|.+++......+++..+..++.+++++++|||+. +++|+|++|+||+++.++.++++|||.+.....
T Consensus 74 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~ 150 (225)
T smart00221 74 LVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHR 150 (225)
T ss_pred EEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecC
Confidence 99999999999999985542389999999999999999999998 999999999999999999999999999866543
Q ss_pred cC---CcceeecCCCcchhhh-ccCCCCCCCCeeehhHHHHHHHhCCCCCCC
Q 004195 640 RG---KGSAEVSSPAKKTSVL-ARTEQDDKSDVYDIGIILIEIIVGRPITSE 687 (769)
Q Consensus 640 ~~---~~~~~~~~~~~~pe~~-~~~~~~~ksDVwS~Gvil~elltG~~p~~~ 687 (769)
.. .........+.+||.. ....++.++||||||++++||++|++||..
T Consensus 151 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 151 DLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred cccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 31 1222334456778876 566778899999999999999999999965
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-27 Score=250.12 Aligned_cols=269 Identities=22% Similarity=0.230 Sum_probs=182.5
Q ss_pred CCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCC
Q 004195 94 GLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFT 173 (769)
Q Consensus 94 ~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~ 173 (769)
+|+.|.++.+--++|..=.++++|+|++|.++..--+.|.+|.+|..|.|+.|+++...+..|.+|++|+.|+|..|+|.
T Consensus 155 DLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~ir 234 (873)
T KOG4194|consen 155 DLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIR 234 (873)
T ss_pred hhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhcccccee
Confidence 34445444444444544455555555555555444455555555555666666655444455555666666666666554
Q ss_pred ccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCCCccc--
Q 004195 174 GAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRL-- 250 (769)
Q Consensus 174 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p~~-- 250 (769)
-.--.+|..|.+|+.|.|..|.++..-...|..|.++++|+|+.|+++..-.+ +.+|+.|+.|+++.|.+...-++.
T Consensus 235 ive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~Ws 314 (873)
T KOG4194|consen 235 IVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWS 314 (873)
T ss_pred eehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhh
Confidence 22244555566666666666666655556677777777778888777654332 677888888888888877655543
Q ss_pred -ccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccc---cCCCCCC
Q 004195 251 -HKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQ---NMSCNPQ 326 (769)
Q Consensus 251 -~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~---~~~~l~~ 326 (769)
.++|.+|+|++|+++ .+++..|..+.+|++|+|++|.++..--..|-.+++|+.|||++|.+++.+-+ .|..++.
T Consensus 315 ftqkL~~LdLs~N~i~-~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~ 393 (873)
T KOG4194|consen 315 FTQKLKELDLSSNRIT-RLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPS 393 (873)
T ss_pred hcccceeEeccccccc-cCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchh
Confidence 468888888888888 45577888888888888888888776666777888888888888888876643 4667888
Q ss_pred CcEEEccCCcCCCCCCccccccCCCceEECCCCCCCh
Q 004195 327 LAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 327 L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 363 (769)
|+.|+|.+|++.......+..+..|+.|++.+|.+-.
T Consensus 394 LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaS 430 (873)
T KOG4194|consen 394 LRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIAS 430 (873)
T ss_pred hhheeecCceeeecchhhhccCcccceecCCCCccee
Confidence 8888888888886666677788888888888886643
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.2e-27 Score=246.10 Aligned_cols=293 Identities=23% Similarity=0.201 Sum_probs=208.5
Q ss_pred eEecCCCeeEEEeCCCCCC----CCCCCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCc
Q 004195 71 LVCYEDNLTQLHIAGDNNN----NINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSN 146 (769)
Q Consensus 71 v~C~~~~v~~l~l~~~~~~----~~~~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N 146 (769)
..|+...+..++-+..... ....++++|.++.+.+..|.++++|+.++|..|.++ .+|...+...+|+.|+|.+|
T Consensus 57 ldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N 135 (873)
T KOG4194|consen 57 LDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHN 135 (873)
T ss_pred eecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeecc
Confidence 5677666666543322111 112567788888888888888888888888888884 56766666667888888888
Q ss_pred ccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCC
Q 004195 147 YLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD 226 (769)
Q Consensus 147 ~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~ 226 (769)
.|+..-.+++..++.|+.||||.|.|+...-.+|..-.++++|+|++|.++..--..|.++.+|..|.|+.|+++..++.
T Consensus 136 ~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r 215 (873)
T KOG4194|consen 136 LISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQR 215 (873)
T ss_pred ccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHH
Confidence 88877777778888888888888888754445676667788888888888776667777788888888888888765543
Q ss_pred -CCCCccCcEEeccCCcCCC---CCccc------------------------ccCCcEEEeCCccccCCcCchhhcCCCc
Q 004195 227 -LRNLKNLRVFDVQDNYFGP---RFPRL------------------------HKKMVTLVLRNNRFQFGLNPDELRSYNQ 278 (769)
Q Consensus 227 -l~~l~~L~~l~l~~N~l~~---~~p~~------------------------~~~L~~L~l~~N~~~~~i~p~~~~~l~~ 278 (769)
|.+|+.|+.|+|..|++.- ..... +.++++|+|+.|+++. +...++..++.
T Consensus 216 ~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~-vn~g~lfgLt~ 294 (873)
T KOG4194|consen 216 SFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQA-VNEGWLFGLTS 294 (873)
T ss_pred HhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhh-hhcccccccch
Confidence 5667777777777776631 11111 3456677777777763 33566777777
Q ss_pred CcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCC
Q 004195 279 LQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSK 358 (769)
Q Consensus 279 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~ 358 (769)
|+.|+||+|.|....+..+...++|+.|+|++|+++...++.|..+.+|+.|+|++|+++-.--..|..+++|+.|++++
T Consensus 295 L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~ 374 (873)
T KOG4194|consen 295 LEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRS 374 (873)
T ss_pred hhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcC
Confidence 77777777777777777777777777777777777777777777777777777777777765555666677777788888
Q ss_pred CCCChhh
Q 004195 359 NCLSNEE 365 (769)
Q Consensus 359 N~l~~~~ 365 (769)
|.++..+
T Consensus 375 N~ls~~I 381 (873)
T KOG4194|consen 375 NELSWCI 381 (873)
T ss_pred CeEEEEE
Confidence 8776544
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.9e-26 Score=233.07 Aligned_cols=266 Identities=16% Similarity=0.261 Sum_probs=192.3
Q ss_pred HHHHHhcCCCCcCccccCCceeEEEEEeC----CCcEEEEEEccccCCCChhHHHHHHHHHhhcc-CCceeeEeeeeecc
Q 004195 474 ELKEATDCFDSSSFMCDASHGQIYKGKLT----DGTLVAIRSLKMSKKSSPHMYTYHIELISKLR-HSNLVSALGHCLDF 548 (769)
Q Consensus 474 el~~~t~~f~~~~~iG~G~~g~Vy~~~~~----~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~ 548 (769)
++....+.|...+.||.|.|++||++.+. .++.||+|.+... .....+.+|+++|..+. +.||+++.+++...
T Consensus 30 ~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t--s~p~ri~~El~~L~~~gG~~ni~~~~~~~rnn 107 (418)
T KOG1167|consen 30 DIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT--SSPSRILNELEMLYRLGGSDNIIKLNGCFRNN 107 (418)
T ss_pred hhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc--cCchHHHHHHHHHHHhccchhhhcchhhhccC
Confidence 34445567889999999999999999853 3678999999754 34567999999999995 99999999988764
Q ss_pred CCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC-ceee
Q 004195 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN-FHVK 627 (769)
Q Consensus 549 ~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~-~~~k 627 (769)
+. +.+|+||++..+..++.. .++..++..+.+.+.+||+++|+. |||||||||+|+|.+.. +.-.
T Consensus 108 d~-------v~ivlp~~~H~~f~~l~~----~l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~ 173 (418)
T KOG1167|consen 108 DQ-------VAIVLPYFEHDRFRDLYR----SLSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGV 173 (418)
T ss_pred Ce-------eEEEecccCccCHHHHHh----cCCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCce
Confidence 44 899999999988888886 467889999999999999999999 99999999999999754 6678
Q ss_pred ecCCCCchhhhcc-------C---------C------------------------------cceeecCCCcchhhhccC-
Q 004195 628 INSYNLPLLAEAR-------G---------K------------------------------GSAEVSSPAKKTSVLART- 660 (769)
Q Consensus 628 l~DFGla~~~~~~-------~---------~------------------------------~~~~~~~~~~~pe~~~~~- 660 (769)
|.|||+|...+.. . . ....++.++.+||++.+.
T Consensus 174 LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~ 253 (418)
T KOG1167|consen 174 LVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCP 253 (418)
T ss_pred EEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhcc
Confidence 9999998621100 0 0 011234455678876654
Q ss_pred CCCCCCCeeehhHHHHHHHhCCCCCCCchh--HHHHhhhh--------h---cccc----c-c----------ccccccC
Q 004195 661 EQDDKSDVYDIGIILIEIIVGRPITSENVV--VLVKDLLQ--------V---NIGT----D-E----------ARKSIVD 712 (769)
Q Consensus 661 ~~~~ksDVwS~Gvil~elltG~~p~~~~~~--~~~~~~~~--------~---~~~~----~-~----------~~~~~~d 712 (769)
..++++||||-|||++-+++++.||..... ....+++. . ..+. . . .+.. ++
T Consensus 254 ~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s-~~ 332 (418)
T KOG1167|consen 254 RQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFET-LH 332 (418)
T ss_pred CcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhc-cC
Confidence 468899999999999999999988753211 11111100 0 0000 0 0 0000 00
Q ss_pred -ccc--------cC-CCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 713 -PAV--------MN-ECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 713 -~~~--------~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
+.+ .. ...+..+..+.+++.+|+..||.+|.|++|+|+|++|.+
T Consensus 333 ~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~ 386 (418)
T KOG1167|consen 333 IESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDE 386 (418)
T ss_pred hhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcc
Confidence 000 00 011112235789999999999999999999999999874
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-26 Score=277.22 Aligned_cols=205 Identities=20% Similarity=0.241 Sum_probs=148.1
Q ss_pred hccC-CceeeEeeeeeccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccc
Q 004195 532 KLRH-SNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFS 610 (769)
Q Consensus 532 ~l~H-~nIv~l~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH 610 (769)
.++| +||++++++|.....+......++.++||+ +++|++++......+++.+++.++.||++||+|||++ +|+|
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---gIvH 103 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQ---GIVV 103 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhC---Ceee
Confidence 4456 688899998854433332234578889988 5699999986555799999999999999999999998 9999
Q ss_pred cCccccceeeCC-------------------CceeeecCCCCchhhhccC----------C--------cceeecCCCcc
Q 004195 611 NNLKITDVLLDE-------------------NFHVKINSYNLPLLAEARG----------K--------GSAEVSSPAKK 653 (769)
Q Consensus 611 rDlKp~NILld~-------------------~~~~kl~DFGla~~~~~~~----------~--------~~~~~~~~~~~ 653 (769)
|||||+|||++. ++.+|++|||+++...... . ....++..|++
T Consensus 104 rDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A 183 (793)
T PLN00181 104 HNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTS 183 (793)
T ss_pred ccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEC
Confidence 999999999953 4567788888775421100 0 00122345788
Q ss_pred hhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHH
Q 004195 654 TSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLR 733 (769)
Q Consensus 654 pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~ 733 (769)
||.+.+..|+.++|||||||+||||++|.+|+..... ....+... ..++.... ......+++.+
T Consensus 184 PE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~-~~~~~~~~----------~~~~~~~~-----~~~~~~~~~~~ 247 (793)
T PLN00181 184 PEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR-TMSSLRHR----------VLPPQILL-----NWPKEASFCLW 247 (793)
T ss_pred hhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH-HHHHHHHh----------hcChhhhh-----cCHHHHHHHHH
Confidence 9998888999999999999999999999988653221 11111110 11111111 12235678889
Q ss_pred cCcCCCCCCCCHHHHHHHhHhhh
Q 004195 734 CLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 734 cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
||+++|.+||+|.|+++|+|+..
T Consensus 248 ~L~~~P~~Rps~~eil~h~~~~~ 270 (793)
T PLN00181 248 LLHPEPSCRPSMSELLQSEFINE 270 (793)
T ss_pred hCCCChhhCcChHHHhhchhhhh
Confidence 99999999999999999999865
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.6e-24 Score=209.11 Aligned_cols=167 Identities=17% Similarity=0.186 Sum_probs=126.8
Q ss_pred CchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhccCCcceee
Q 004195 568 ETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEV 647 (769)
Q Consensus 568 gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~~~~~ 647 (769)
|+|.++++..+..++|.++..|+.|+++||+|||+. + ||+||+++.++.+|+ ||+++....... .+
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~~---~g 66 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQS---RV 66 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeeccccC---CC
Confidence 689999986556799999999999999999999997 4 999999999999999 999876543221 34
Q ss_pred cCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchh--HHHHhhhhhccccccccccccCccccCCCCHHHHH
Q 004195 648 SSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVV--VLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLK 725 (769)
Q Consensus 648 ~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 725 (769)
+..|++||.+.+..++.++|||||||++|||+||++||..... .....+... ... .++.. .........
T Consensus 67 ~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~-~~~-------~~~~~-~~~~~~~~~ 137 (176)
T smart00750 67 DPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNG-MPA-------DDPRD-RSNLESVSA 137 (176)
T ss_pred cccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHH-hcc-------CCccc-cccHHHHHh
Confidence 5678899999888999999999999999999999999864321 111111110 000 00000 011122222
Q ss_pred --HHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 726 --RMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 726 --~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
++.+++.+||+.+|++||++.|+++|++....
T Consensus 138 ~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 138 ARSFADFMRVCASRLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred hhhHHHHHHHHHhcccccccCHHHHHHHHHHHHH
Confidence 58999999999999999999999999998743
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.6e-23 Score=237.38 Aligned_cols=309 Identities=23% Similarity=0.339 Sum_probs=150.7
Q ss_pred CccCCHHHHHHHHHHHHhcCCCCCCCC----CCCCCCCCCCCCCC-----------CCCcceEecCCCeeEEEeCCCCCC
Q 004195 25 SNQLQLFQYQTLVRIQQLLNYPSVSSS----FNTTTVTDFCNIEP-----------TPSLTLVCYEDNLTQLHIAGDNNN 89 (769)
Q Consensus 25 ~~~~~~~~~~~ll~~k~~~~~~~~l~~----w~~~~~~~~c~~~~-----------~~~~~v~C~~~~v~~l~l~~~~~~ 89 (769)
+....++|.+.+++.++.+.+|..+++ |+..+ ++|.... .+..+|.|.++.||++++.|....
T Consensus 57 ~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~--~fc~~~~~~~~~l~~~~~~~~~tv~~~~~~vt~l~~~g~~~~ 134 (754)
T PRK15370 57 PETASPEEIKSKFECLRMLAFPAYADNIQYSRGGAD--QYCILSENSQEILSIVFNTEGYTVEGGGKSVTYTRVTESEQA 134 (754)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCchhhccccccCCCC--cccccCCcchhhheeeecCCceEEecCCCccccccccccccc
Confidence 344567899999999999999976555 98877 9998876 567789999999999998775322
Q ss_pred CCC---CCCCC----------CCCCCccc---ccc-----CCCCCCcEEEeecccccCCCCccccCCCcCceeeccCccc
Q 004195 90 NIN---GGLAH----------NFSTDTFF---STL-----GSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYL 148 (769)
Q Consensus 90 ~~~---~~l~~----------n~~~~~~~---~~~-----~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l 148 (769)
... .+... +.....-. ..+ .-..+...|++++++++. +|..+. ++|+.|+|++|+|
T Consensus 135 ~~~~~~~~~~~~~~~w~~w~~~~~~~~~~~r~~a~~r~~~Cl~~~~~~L~L~~~~Lts-LP~~Ip--~~L~~L~Ls~N~L 211 (754)
T PRK15370 135 SSASGSKDAVNYELIWSEWVKEAPAKEAANREEAVQRMRDCLKNNKTELRLKILGLTT-IPACIP--EQITTLILDNNEL 211 (754)
T ss_pred ccCCCCCChhhHHHHHHHHHhcCCCCccccHHHHHHHHHhhcccCceEEEeCCCCcCc-CCcccc--cCCcEEEecCCCC
Confidence 110 00000 00000000 000 001234455555555542 343332 3455555555555
Q ss_pred CCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCCCC
Q 004195 149 SGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLR 228 (769)
Q Consensus 149 ~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~ 228 (769)
+ .+|..+. ++|++|+|++|+|+ .+|..+. .+|+.|+|++|+++ .+|..+. ++|+.|++++|+|+..+..+.
T Consensus 212 t-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~~LP~~l~ 282 (754)
T PRK15370 212 K-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKISCLPENLP 282 (754)
T ss_pred C-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccCccccccC
Confidence 5 3444332 35555555555554 3444332 24555555555555 3444332 345555555555553221221
Q ss_pred CCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEc
Q 004195 229 NLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDI 308 (769)
Q Consensus 229 ~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l 308 (769)
.+|+.|++++|.|++..+.....|..|++++|.++. + |..+ .++|+.|++++|.+++ +|..+. ++|+.|+|
T Consensus 283 --~sL~~L~Ls~N~Lt~LP~~lp~sL~~L~Ls~N~Lt~-L-P~~l--~~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~L 353 (754)
T PRK15370 283 --EELRYLSVYDNSIRTLPAHLPSGITHLNVQSNSLTA-L-PETL--PPGLKTLEAGENALTS-LPASLP--PELQVLDV 353 (754)
T ss_pred --CCCcEEECCCCccccCcccchhhHHHHHhcCCcccc-C-Cccc--cccceeccccCCcccc-CChhhc--CcccEEEC
Confidence 245555555555543222222344455555555542 2 2222 1345555555555443 333332 34555555
Q ss_pred cCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCC
Q 004195 309 HGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLS 362 (769)
Q Consensus 309 ~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~ 362 (769)
++|+|+. +|..+. ++|+.|+|++|+|+. +|..+. ..++.+++++|.++
T Consensus 354 s~N~L~~-LP~~lp--~~L~~LdLs~N~Lt~-LP~~l~--~sL~~LdLs~N~L~ 401 (754)
T PRK15370 354 SKNQITV-LPETLP--PTITTLDVSRNALTN-LPENLP--AALQIMQASRNNLV 401 (754)
T ss_pred CCCCCCc-CChhhc--CCcCEEECCCCcCCC-CCHhHH--HHHHHHhhccCCcc
Confidence 5555442 233221 345555555555542 233221 12444444444443
|
|
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.9e-26 Score=238.72 Aligned_cols=278 Identities=24% Similarity=0.333 Sum_probs=197.6
Q ss_pred CeeEEEeCCCCCCCCCCCCCCCC-------------C-CCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceee
Q 004195 77 NLTQLHIAGDNNNNINGGLAHNF-------------S-TDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILN 142 (769)
Q Consensus 77 ~v~~l~l~~~~~~~~~~~l~~n~-------------~-~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~ 142 (769)
-|+.+++++|..++ ..+|++. . ...+|+.++.|.+|++|.+++|++.. +-+.++.|+.|+.++
T Consensus 8 FVrGvDfsgNDFsg--~~FP~~v~qMt~~~WLkLnrt~L~~vPeEL~~lqkLEHLs~~HN~L~~-vhGELs~Lp~LRsv~ 84 (1255)
T KOG0444|consen 8 FVRGVDFSGNDFSG--DRFPHDVEQMTQMTWLKLNRTKLEQVPEELSRLQKLEHLSMAHNQLIS-VHGELSDLPRLRSVI 84 (1255)
T ss_pred eeecccccCCcCCC--CcCchhHHHhhheeEEEechhhhhhChHHHHHHhhhhhhhhhhhhhHh-hhhhhccchhhHHHh
Confidence 46777777776654 2344321 1 12467888889999999999998854 445688888899999
Q ss_pred ccCcccC-CcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCcccc
Q 004195 143 LSSNYLS-GSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLS 221 (769)
Q Consensus 143 Ls~N~l~-g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~ 221 (769)
+..|++. ..||..+..|..|.+||||+|++. +.|..+..-+++-+|+||+|++..++-+-|.+|+.|-.||||+|+|.
T Consensus 85 ~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe 163 (1255)
T KOG0444|consen 85 VRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE 163 (1255)
T ss_pred hhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh
Confidence 9888875 358888999999999999999998 88999999999999999999998554466778999999999999999
Q ss_pred ccCCCCCCCccCcEEeccCCcCCC----CCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccC
Q 004195 222 GEIPDLRNLKNLRVFDVQDNYFGP----RFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSL 297 (769)
Q Consensus 222 ~~~p~l~~l~~L~~l~l~~N~l~~----~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 297 (769)
..+|....|..|+.|+|++|.+.- .+| .+++|..|.+++.+=+-.-.|.++..+.+|..+|||.|++.. .|..+
T Consensus 164 ~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLP-smtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp~-vPecl 241 (1255)
T KOG0444|consen 164 MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLP-SMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLPI-VPECL 241 (1255)
T ss_pred hcCHHHHHHhhhhhhhcCCChhhHHHHhcCc-cchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCCc-chHHH
Confidence 888889999999999999997642 122 134555566655443322226666666677777777776653 56666
Q ss_pred CCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCC
Q 004195 298 LSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLS 362 (769)
Q Consensus 298 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~ 362 (769)
.++++|+.|+||+|+|+.... ..+.-.+|+.|++|.|+++ .+|++++.+++|+.|++.+|.++
T Consensus 242 y~l~~LrrLNLS~N~iteL~~-~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~ 304 (1255)
T KOG0444|consen 242 YKLRNLRRLNLSGNKITELNM-TEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLT 304 (1255)
T ss_pred hhhhhhheeccCcCceeeeec-cHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCccc
Confidence 667777777777776665321 2223345666677777766 56666666666666666666543
|
|
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.8e-25 Score=235.64 Aligned_cols=250 Identities=26% Similarity=0.335 Sum_probs=149.8
Q ss_pred ccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCc-cccCCCcCCEEEcccCcCCccCCccCc
Q 004195 103 TFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPV-QISSLRNLQTLILDDNKFTGAVPSELS 181 (769)
Q Consensus 103 ~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~ 181 (769)
-+|+.+.+|.-|.+||||+|++ .+.|..+..-+++-+|+||+|+|. .||. -|-+|+.|-.||||+|++. .+|+.+.
T Consensus 94 GiP~diF~l~dLt~lDLShNqL-~EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~R 170 (1255)
T KOG0444|consen 94 GIPTDIFRLKDLTILDLSHNQL-REVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLE-MLPPQIR 170 (1255)
T ss_pred CCCchhcccccceeeecchhhh-hhcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchhh-hcCHHHH
Confidence 4566677777777777777777 356777777777777777777776 3443 3456777777777777776 5666677
Q ss_pred CCcCCCEEeccCCCCcc-------------------------cCCccccCCCCCCEEEccCccccccCCCCCCCccCcEE
Q 004195 182 LLQVLSVLSLKNNSLSG-------------------------FLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVF 236 (769)
Q Consensus 182 ~l~~L~~L~L~~N~l~~-------------------------~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l 236 (769)
.|..|+.|+|++|.+.- .+|.++.+|.+|..+|||.|+|.-.+..+.++.+|+.|
T Consensus 171 RL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp~vPecly~l~~LrrL 250 (1255)
T KOG0444|consen 171 RLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLPIVPECLYKLRNLRRL 250 (1255)
T ss_pred HHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCCcchHHHhhhhhhhee
Confidence 77777777777775532 24444445555555555555554333335555555555
Q ss_pred eccCCcCCCCCcc--cccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccc-cCCccCCCCCCCCEEEccCCcC
Q 004195 237 DVQDNYFGPRFPR--LHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVG-PFIPSLLSLPSITYLDIHGNKL 313 (769)
Q Consensus 237 ~l~~N~l~~~~p~--~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~l~~N~l 313 (769)
+||+|.++..--. .+.+|++|+||.|+++ .+ |+.+..+++|+.|.+.+|+++- -+|..++.+.+|+.+..++|.+
T Consensus 251 NLS~N~iteL~~~~~~W~~lEtLNlSrNQLt-~L-P~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~L 328 (1255)
T KOG0444|consen 251 NLSGNKITELNMTEGEWENLETLNLSRNQLT-VL-PDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKL 328 (1255)
T ss_pred ccCcCceeeeeccHHHHhhhhhhccccchhc-cc-hHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhcccc
Confidence 5555555432211 2345556666666665 23 5666666666666666665431 1455566666666666666655
Q ss_pred CccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCC
Q 004195 314 TGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKN 359 (769)
Q Consensus 314 ~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N 359 (769)
. .+|+.++.++.|+.|.|+.|++. .+|..+..++.+..|++..|
T Consensus 329 E-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreN 372 (1255)
T KOG0444|consen 329 E-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLREN 372 (1255)
T ss_pred c-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCC
Confidence 4 35666666666666666666665 45556655666666666655
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.3e-22 Score=215.30 Aligned_cols=141 Identities=16% Similarity=0.151 Sum_probs=112.3
Q ss_pred HHhcCCCCcCccccCCceeEEEEEeC--CCcEEEEEEccccC-----CCChhHHHHHHHHHhhccCCceeeEeeeeeccC
Q 004195 477 EATDCFDSSSFMCDASHGQIYKGKLT--DGTLVAIRSLKMSK-----KSSPHMYTYHIELISKLRHSNLVSALGHCLDFS 549 (769)
Q Consensus 477 ~~t~~f~~~~~iG~G~~g~Vy~~~~~--~g~~vAvK~~~~~~-----~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~ 549 (769)
...++|...+.||+|+||+||+|+++ +++.||||++.... ....+.+.+|++++++++|+|+|..+..+ .
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---~ 91 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---G 91 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---C
Confidence 34567999999999999999999864 57888999875321 11235689999999999999999533222 1
Q ss_pred CCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCc-cccceeeCCCceeee
Q 004195 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNL-KITDVLLDENFHVKI 628 (769)
Q Consensus 550 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDl-Kp~NILld~~~~~kl 628 (769)
..++||||+++++|... ... . ...++.++++||+|||+. +|+|||| ||+|||++.++.+||
T Consensus 92 -------~~~LVmE~~~G~~L~~~-~~~----~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikL 153 (365)
T PRK09188 92 -------KDGLVRGWTEGVPLHLA-RPH----G---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAV 153 (365)
T ss_pred -------CcEEEEEccCCCCHHHh-Ccc----c---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEE
Confidence 16999999999999732 211 1 146788999999999998 9999999 999999999999999
Q ss_pred cCCCCchhhh
Q 004195 629 NSYNLPLLAE 638 (769)
Q Consensus 629 ~DFGla~~~~ 638 (769)
+|||+|+...
T Consensus 154 iDFGlA~~~~ 163 (365)
T PRK09188 154 IDFQLASVFR 163 (365)
T ss_pred EECccceecc
Confidence 9999997553
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.5e-24 Score=215.96 Aligned_cols=244 Identities=26% Similarity=0.320 Sum_probs=145.0
Q ss_pred CCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCc-CCcCCCEE
Q 004195 111 LSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELS-LLQVLSVL 189 (769)
Q Consensus 111 l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L 189 (769)
++.|+.||.-+|-+ +.+|+.++.+.+|..|+|..|+|. .+| +|.+++.|.+|+++.|+|+ .+|.+.+ +|.+|.+|
T Consensus 182 m~~L~~ld~~~N~L-~tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vL 257 (565)
T KOG0472|consen 182 MKRLKHLDCNSNLL-ETLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVL 257 (565)
T ss_pred HHHHHhcccchhhh-hcCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceee
Confidence 55666666655555 455666666666666666666665 455 5666666666666666555 4555544 56666666
Q ss_pred eccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCC-------------------------
Q 004195 190 SLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFG------------------------- 244 (769)
Q Consensus 190 ~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~------------------------- 244 (769)
||..|++. ..|.++.-+.+|++||+|+|.+++.+++++++ .|+.|-+.+|.+.
T Consensus 258 DLRdNklk-e~Pde~clLrsL~rLDlSNN~is~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~d 335 (565)
T KOG0472|consen 258 DLRDNKLK-EVPDEICLLRSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDD 335 (565)
T ss_pred eccccccc-cCchHHHHhhhhhhhcccCCccccCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccC
Confidence 66666665 45666666666666666666666666666655 5555555555331
Q ss_pred C-----------------CCccc-----------------------c-----cCCcEEEeCCccccC-------------
Q 004195 245 P-----------------RFPRL-----------------------H-----KKMVTLVLRNNRFQF------------- 266 (769)
Q Consensus 245 ~-----------------~~p~~-----------------------~-----~~L~~L~l~~N~~~~------------- 266 (769)
| ..|.. + .-....+++.|++..
T Consensus 336 glS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~elPk~L~~lkelvT 415 (565)
T KOG0472|consen 336 GLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLCELPKRLVELKELVT 415 (565)
T ss_pred CCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHhhhhhhhHHHHHHHH
Confidence 0 00000 0 001123333333221
Q ss_pred ---------CcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcC-----------------------C
Q 004195 267 ---------GLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKL-----------------------T 314 (769)
Q Consensus 267 ---------~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l-----------------------~ 314 (769)
+..|..+..+++|..|+|++|.+.. +|..++.+-.|+.|++++|+| .
T Consensus 416 ~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln~-LP~e~~~lv~Lq~LnlS~NrFr~lP~~~y~lq~lEtllas~nqi~ 494 (565)
T KOG0472|consen 416 DLVLSNNKISFVPLELSQLQKLTFLDLSNNLLND-LPEEMGSLVRLQTLNLSFNRFRMLPECLYELQTLETLLASNNQIG 494 (565)
T ss_pred HHHhhcCccccchHHHHhhhcceeeecccchhhh-cchhhhhhhhhheecccccccccchHHHhhHHHHHHHHhcccccc
Confidence 1124455566666666666665543 566666666666666665544 4
Q ss_pred ccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCC
Q 004195 315 GLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLS 362 (769)
Q Consensus 315 ~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~ 362 (769)
...++.+.++.+|..|||.+|.+. .+|+.++++.+++.+.+.+|.+.
T Consensus 495 ~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 495 SVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred ccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 444455778889999999999998 78888999999999999999875
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.9e-23 Score=196.45 Aligned_cols=241 Identities=17% Similarity=0.290 Sum_probs=180.0
Q ss_pred CccccCCceeEEEEEeCCCcEEEEEEccccCC--CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEEEe
Q 004195 486 SFMCDASHGQIYKGKLTDGTLVAIRSLKMSKK--SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFE 563 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV~E 563 (769)
-+|.+...|..|+|+++ |..+++|++..... .-.++|..|.-.++-..||||..++|.|... .+..++..
T Consensus 196 tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsp-------pnlv~isq 267 (448)
T KOG0195|consen 196 TKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSP-------PNLVIISQ 267 (448)
T ss_pred hhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCC-------CCceEeee
Confidence 35677788999999997 45566777765432 2246799999999999999999999999763 34789999
Q ss_pred ccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeec--CCCCchhhhcc
Q 004195 564 YAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKIN--SYNLPLLAEAR 640 (769)
Q Consensus 564 y~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~--DFGla~~~~~~ 640 (769)
|||.|+|+..++.. +...+-.+..+++.++|+|++|||+. .|-|.---+.+..+++|++.++||+ |--++.
T Consensus 268 ~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfsf----- 341 (448)
T KOG0195|consen 268 YMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFSF----- 341 (448)
T ss_pred eccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceeee-----
Confidence 99999999999843 34577889999999999999999985 4444445688999999999998885 322221
Q ss_pred CCcceeecCCCcchhhhccCCC---CCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccC
Q 004195 641 GKGSAEVSSPAKKTSVLARTEQ---DDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMN 717 (769)
Q Consensus 641 ~~~~~~~~~~~~~pe~~~~~~~---~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 717 (769)
......+.+.++.||.+.+.+- -..+|+|||.+++||+.|+.-||.+-.....-- ++.-..++.
T Consensus 342 qe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgm-------------kialeglrv 408 (448)
T KOG0195|consen 342 QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGM-------------KIALEGLRV 408 (448)
T ss_pred eccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhh-------------hhhhccccc
Confidence 1123345667788998876654 347999999999999999999997543221110 111122223
Q ss_pred CCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 718 ECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 718 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
..++.....+.+++.-|+..||.+||.++.|+-.++
T Consensus 409 ~ippgis~hm~klm~icmnedpgkrpkfdmivpile 444 (448)
T KOG0195|consen 409 HIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILE 444 (448)
T ss_pred cCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHH
Confidence 345555566899999999999999999999887665
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.3e-20 Score=199.18 Aligned_cols=257 Identities=16% Similarity=0.179 Sum_probs=182.8
Q ss_pred CCCCcCccccCCceeEEEEEeCC--CcEEEEEEccccCCCChhHHHHHHHHHhhccC----CceeeEeeeee-ccCCCCC
Q 004195 481 CFDSSSFMCDASHGQIYKGKLTD--GTLVAIRSLKMSKKSSPHMYTYHIELISKLRH----SNLVSALGHCL-DFSLDDP 553 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~~--g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H----~nIv~l~~~~~-~~~~~~~ 553 (769)
.|...+.||+|+||.||+|.... ...+|+|............+..|+.++..+.. +++.++++... .
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~------ 92 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRST------ 92 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCC------
Confidence 78899999999999999999654 35788888876543333378889999998863 58888887763 3
Q ss_pred CcceEEEEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC-----ceee
Q 004195 554 SISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN-----FHVK 627 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~-----~~~k 627 (769)
....++||+.+ |.+|.++.... ...++-.+..+|+.|++.+|+++|+. |++||||||+|+++... ..+.
T Consensus 93 -~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~ 167 (322)
T KOG1164|consen 93 -EDFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLY 167 (322)
T ss_pred -CceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEE
Confidence 23469999998 78999988633 36799999999999999999999999 99999999999999754 4689
Q ss_pred ecCCCCchhhh---ccC---------CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHH
Q 004195 628 INSYNLPLLAE---ARG---------KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVK 694 (769)
Q Consensus 628 l~DFGla~~~~---~~~---------~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~ 694 (769)
+.|||+++... ... .....++..|..+....+.+.+.+.|+||++.++.|+..|..|+...... ...
T Consensus 168 llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~ 247 (322)
T KOG1164|consen 168 LLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKS 247 (322)
T ss_pred EEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHH
Confidence 99999997221 111 00111334455566667778899999999999999999999888543311 111
Q ss_pred hhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 695 DLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 695 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
...... ......+ .....+. .+.++...+-..+..++|....+...+.......
T Consensus 248 ~~~~~~------~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~ 301 (322)
T KOG1164|consen 248 KFEKDP------RKLLTDR--FGDLKPE---EFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSE 301 (322)
T ss_pred HHHHHh------hhhcccc--ccCCChH---HHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence 111100 0000010 1122222 2455555556689999999999998877655443
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.85 E-value=3e-21 Score=188.69 Aligned_cols=139 Identities=12% Similarity=0.118 Sum_probs=108.2
Q ss_pred cCccccCCceeEEEEEeCCCcEEEEEEccccCCC--C-------hh-----------------HHHHHHHHHhhccCCce
Q 004195 485 SSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKS--S-------PH-----------------MYTYHIELISKLRHSNL 538 (769)
Q Consensus 485 ~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~--~-------~~-----------------~~~~Ei~~l~~l~H~nI 538 (769)
...||+|++|.||+|...+|+.||||+++..... . .. ...+|++++.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4689999999999999888999999999754211 1 01 12349999999988876
Q ss_pred eeEeeeeeccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhccc-ccCCCCCccccCccccc
Q 004195 539 VSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFL-HTGIVPGVFSNNLKITD 617 (769)
Q Consensus 539 v~l~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~ivHrDlKp~N 617 (769)
.....+... . .++||||++++++....... ..+++.....++.|++.+|+|+ |+. +|+||||||+|
T Consensus 82 ~~p~~~~~~-~--------~~iVmE~i~g~~l~~~~~~~-~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~N 148 (190)
T cd05147 82 PCPEPILLK-S--------HVLVMEFIGDDGWAAPRLKD-APLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYN 148 (190)
T ss_pred CCCcEEEec-C--------CEEEEEEeCCCCCcchhhhc-CCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHH
Confidence 443322211 1 38999999988776553322 3688999999999999999999 677 99999999999
Q ss_pred eeeCCCceeeecCCCCchhh
Q 004195 618 VLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 618 ILld~~~~~kl~DFGla~~~ 637 (769)
|+++ ++.++++|||+|...
T Consensus 149 Ili~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 149 LLYH-DGKLYIIDVSQSVEH 167 (190)
T ss_pred EEEE-CCcEEEEEccccccC
Confidence 9998 478999999998643
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.2e-24 Score=214.72 Aligned_cols=247 Identities=29% Similarity=0.380 Sum_probs=217.8
Q ss_pred ccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCc
Q 004195 105 FSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQ 184 (769)
Q Consensus 105 ~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 184 (769)
.+.+.+|..|.+|++++|+++ .+|++++.+..++.|+.|+|+++ .+|++++++.+|..|+.++|.+. .+|++++.+.
T Consensus 61 ~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~ 137 (565)
T KOG0472|consen 61 REDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLL 137 (565)
T ss_pred cHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHHh
Confidence 346778999999999999994 67889999999999999999998 89999999999999999999998 8899999999
Q ss_pred CCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCccc--ccCCcEEEeCCc
Q 004195 185 VLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRL--HKKMVTLVLRNN 262 (769)
Q Consensus 185 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~--~~~L~~L~l~~N 262 (769)
.|+.|+..+|+++ ..|+.++++.+|..|++.+|++...+|..-+++.|+.+|...|.+....|.. +.+|..|+|..|
T Consensus 138 ~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~m~~L~~ld~~~N~L~tlP~~lg~l~~L~~LyL~~N 216 (565)
T KOG0472|consen 138 DLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIAMKRLKHLDCNSNLLETLPPELGGLESLELLYLRRN 216 (565)
T ss_pred hhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHHHHHHHhcccchhhhhcCChhhcchhhhHHHHhhhc
Confidence 9999999999999 6888999999999999999999998888777999999999999997666654 578889999999
Q ss_pred cccCCcCchhhcCCCcCcEEeccCccccccCCccC-CCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCC
Q 004195 263 RFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSL-LSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYL 341 (769)
Q Consensus 263 ~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~ 341 (769)
.+.. + | +|..+..|.+|.++.|++.- +|.+. .++++|..|||..|+++. .|..+.-+.+|..||+|+|.+++ .
T Consensus 217 ki~~-l-P-ef~gcs~L~Elh~g~N~i~~-lpae~~~~L~~l~vLDLRdNklke-~Pde~clLrsL~rLDlSNN~is~-L 290 (565)
T KOG0472|consen 217 KIRF-L-P-EFPGCSLLKELHVGENQIEM-LPAEHLKHLNSLLVLDLRDNKLKE-VPDEICLLRSLERLDLSNNDISS-L 290 (565)
T ss_pred cccc-C-C-CCCccHHHHHHHhcccHHHh-hHHHHhcccccceeeecccccccc-CchHHHHhhhhhhhcccCCcccc-C
Confidence 9984 4 6 89999999999999999875 56655 489999999999999986 67888888999999999999995 5
Q ss_pred CccccccCCCceEECCCCCCC
Q 004195 342 PSCLQVEAKTRLVLYSKNCLS 362 (769)
Q Consensus 342 p~~~~~~~~l~~l~l~~N~l~ 362 (769)
|..++++ .++.+.+.+|.+-
T Consensus 291 p~sLgnl-hL~~L~leGNPlr 310 (565)
T KOG0472|consen 291 PYSLGNL-HLKFLALEGNPLR 310 (565)
T ss_pred Ccccccc-eeeehhhcCCchH
Confidence 6667777 6888888888663
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.3e-20 Score=213.73 Aligned_cols=222 Identities=28% Similarity=0.303 Sum_probs=163.9
Q ss_pred CCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEe
Q 004195 111 LSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLS 190 (769)
Q Consensus 111 l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 190 (769)
+++|++|+|++|+|+. +|.. .++|+.|+|++|.|+ .+|..+ ++|+.|+|++|+++ .+|.. +++|+.|+
T Consensus 241 p~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~Ls~N~L~-~Lp~lp---~~L~~L~Ls~N~Lt-~LP~~---p~~L~~Ld 308 (788)
T PRK15387 241 PPELRTLEVSGNQLTS-LPVL---PPGLLELSIFSNPLT-HLPALP---SGLCKLWIFGNQLT-SLPVL---PPGLQELS 308 (788)
T ss_pred CCCCcEEEecCCccCc-ccCc---ccccceeeccCCchh-hhhhch---hhcCEEECcCCccc-ccccc---ccccceeE
Confidence 3667777777777764 4532 356777777777776 355432 45777888888877 45542 46788888
Q ss_pred ccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCc
Q 004195 191 LKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNP 270 (769)
Q Consensus 191 L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p 270 (769)
|++|++++ +|... .+|+.|++++|+|++ +|.+ ..+|+.|++++|.|++ +|....+|..|++++|.++. + |
T Consensus 309 LS~N~L~~-Lp~lp---~~L~~L~Ls~N~L~~-LP~l--p~~Lq~LdLS~N~Ls~-LP~lp~~L~~L~Ls~N~L~~-L-P 378 (788)
T PRK15387 309 VSDNQLAS-LPALP---SELCKLWAYNNQLTS-LPTL--PSGLQELSVSDNQLAS-LPTLPSELYKLWAYNNRLTS-L-P 378 (788)
T ss_pred CCCCcccc-CCCCc---ccccccccccCcccc-cccc--ccccceEecCCCccCC-CCCCCcccceehhhcccccc-C-c
Confidence 88888885 44322 357777888888875 4443 2578899999999985 56666788889999999884 5 5
Q ss_pred hhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCC
Q 004195 271 DELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAK 350 (769)
Q Consensus 271 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~ 350 (769)
.. ..+|+.|+|++|+|++ +|.. .++|+.|++++|+|++ +|.. ..+|+.|++++|+|+ .+|..+..++.
T Consensus 379 ~l---~~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~ 446 (788)
T PRK15387 379 AL---PSGLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSS 446 (788)
T ss_pred cc---ccccceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccC
Confidence 43 3578999999999986 4543 3679999999999987 4543 246888999999998 78998989999
Q ss_pred CceEECCCCCCChhhh
Q 004195 351 TRLVLYSKNCLSNEEQ 366 (769)
Q Consensus 351 l~~l~l~~N~l~~~~~ 366 (769)
+..+++++|.+++..+
T Consensus 447 L~~LdLs~N~Ls~~~~ 462 (788)
T PRK15387 447 ETTVNLEGNPLSERTL 462 (788)
T ss_pred CCeEECCCCCCCchHH
Confidence 9999999999987643
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.6e-22 Score=223.88 Aligned_cols=258 Identities=22% Similarity=0.236 Sum_probs=185.6
Q ss_pred CcCccccCCceeEEEEEeC-CCcEEEEEEcccc--CCCChh----HHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 484 SSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS--KKSSPH----MYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 484 ~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~--~~~~~~----~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
....+|.|++|.|+.+... ..+.++.|..+.. ...... .+..|+.+-..++|||++..+..+.+...
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~------ 395 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDG------ 395 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhccc------
Confidence 4688999999988887743 4555666654421 111122 24557777788899999988887765433
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..-+||||++ ||..++...+ .++-.++..++.|+.+|++|+|+. ||.|||+|++|+++..+|.+||+|||.+..
T Consensus 396 -~~~~mE~~~~-Dlf~~~~~~~-~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~v 469 (601)
T KOG0590|consen 396 -ILQSMEYCPY-DLFSLVMSNG-KLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASV 469 (601)
T ss_pred -chhhhhcccH-HHHHHHhccc-ccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCccee
Confidence 3344999999 9999998653 578888999999999999999999 999999999999999999999999999854
Q ss_pred hhcc------CCcceeecCCCcchhhhccCCCCC-CCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccccc
Q 004195 637 AEAR------GKGSAEVSSPAKKTSVLARTEQDD-KSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKS 709 (769)
Q Consensus 637 ~~~~------~~~~~~~~~~~~~pe~~~~~~~~~-ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (769)
.... ......+..||.+||.+.+.+|++ ..||||.|||+..|++|+.||.......-.. ..... ... ..
T Consensus 470 f~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~-~~~~~--~~~-~~ 545 (601)
T KOG0590|consen 470 FRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF-KTNNY--SDQ-RN 545 (601)
T ss_pred eccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch-hhhcc--ccc-cc
Confidence 3221 123445677899999999999966 6899999999999999999885432211100 00000 000 00
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 710 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
+... ........+.+...++.++++.||.+|.|+++|++..|+.....
T Consensus 546 ~~~~--~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~~ 593 (601)
T KOG0590|consen 546 IFEG--PNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIEC 593 (601)
T ss_pred cccC--hHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcce
Confidence 0000 00112234455788999999999999999999999999886543
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.7e-21 Score=189.67 Aligned_cols=177 Identities=14% Similarity=0.134 Sum_probs=133.9
Q ss_pred hcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhH---------HHHHHHHHhhccCCceeeEeeeeeccC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHM---------YTYHIELISKLRHSNLVSALGHCLDFS 549 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~---------~~~Ei~~l~~l~H~nIv~l~~~~~~~~ 549 (769)
.++|...+.+|.|+||.||.+.. ++..+|||.++......... +.+|+..+.+++|++|..+.+++....
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~ 108 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE 108 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence 56899999999999999999765 57789999998654333322 688999999999999999998876432
Q ss_pred CCC-CCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeee
Q 004195 550 LDD-PSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKI 628 (769)
Q Consensus 550 ~~~-~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl 628 (769)
... ...+..++||||++|.+|.++.. ++. ....+++.++..+|+. +++|||+||+||+++.++ +++
T Consensus 109 ~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~g-i~l 175 (232)
T PRK10359 109 RKTLRYAHTYIMLIEYIEGVELNDMPE-----ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKNG-LRI 175 (232)
T ss_pred cccccccCCeEEEEEEECCccHHHhhh-----ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCCC-EEE
Confidence 110 01234799999999999988742 222 2456899999999999 999999999999999988 999
Q ss_pred cCCCCchhhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHH
Q 004195 629 NSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEII 679 (769)
Q Consensus 629 ~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ell 679 (769)
+|||.......... .........|..++|||||||.+.-..
T Consensus 176 iDfg~~~~~~e~~a----------~d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 176 IDLSGKRCTAQRKA----------KDRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EECCCcccccchhh----------HHHHHHHhHhcccccccceeEeehHHH
Confidence 99998754321110 112333445678999999999876653
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.4e-19 Score=193.91 Aligned_cols=254 Identities=20% Similarity=0.311 Sum_probs=191.4
Q ss_pred CCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCC---hhHHHHHHHHHhhccCC-ceeeEeeeeeccCCCCCCcce
Q 004195 482 FDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSS---PHMYTYHIELISKLRHS-NLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~---~~~~~~Ei~~l~~l~H~-nIv~l~~~~~~~~~~~~~~~~ 557 (769)
|.....||.|+||.||++... ..+|+|.+....... ...+.+|+.+++.+.|+ +|+++.+++.... .
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~-------~ 72 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEG-------S 72 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCC-------E
Confidence 556788999999999999986 789999998664332 56799999999999988 7999999985422 2
Q ss_pred EEEEEeccCCCchhhhhcCCC--CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc-eeeecCCCCc
Q 004195 558 IYLIFEYAPNETLRSFISGPG--YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF-HVKINSYNLP 634 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~-~~kl~DFGla 634 (769)
.++++||+.++++.+++.... ..++......+..|++.++.|+|+. +++|||+||+||+++..+ .++++|||.+
T Consensus 73 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~ 149 (384)
T COG0515 73 LYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLA 149 (384)
T ss_pred EEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcc
Confidence 699999999999997777543 2688899999999999999999999 999999999999999988 7999999998
Q ss_pred hhhhccC--------CcceeecCCCcchhhhcc---CCCCCCCCeeehhHHHHHHHhCCCCCCCchh----HHHHhhhhh
Q 004195 635 LLAEARG--------KGSAEVSSPAKKTSVLAR---TEQDDKSDVYDIGIILIEIIVGRPITSENVV----VLVKDLLQV 699 (769)
Q Consensus 635 ~~~~~~~--------~~~~~~~~~~~~pe~~~~---~~~~~ksDVwS~Gvil~elltG~~p~~~~~~----~~~~~~~~~ 699 (769)
+...... .....++..+.+|+.... ..++...|+||+|++++++++|..|+..... ......+..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 229 (384)
T COG0515 150 KLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILE 229 (384)
T ss_pred eecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHh
Confidence 6443322 233445566778888776 5788999999999999999999988765432 122221111
Q ss_pred ccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 700 NIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 700 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
.... .................+.+++.+|+..+|..|.++.+...+.+
T Consensus 230 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 277 (384)
T COG0515 230 LPTP------SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDL 277 (384)
T ss_pred cCCc------ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchH
Confidence 1100 00000000101112245788999999999999999998887743
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.7e-20 Score=181.78 Aligned_cols=139 Identities=13% Similarity=0.136 Sum_probs=110.2
Q ss_pred cCccccCCceeEEEEEeCCCcEEEEEEccccCCC---------------------C-----hhHHHHHHHHHhhccCCce
Q 004195 485 SSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKS---------------------S-----PHMYTYHIELISKLRHSNL 538 (769)
Q Consensus 485 ~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~---------------------~-----~~~~~~Ei~~l~~l~H~nI 538 (769)
...||+|++|.||+|+..+|+.||||+++..... . ...+.+|.+.+.+++|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999878999999999864211 0 1123578999999999988
Q ss_pred eeEeeeeeccCCCCCCcceEEEEEeccCCCchhhh-hcCCCCCCCHHHHHHHHHHHHHHhccccc-CCCCCccccCcccc
Q 004195 539 VSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSF-ISGPGYKLTWVQRIAAAIAIVKGVQFLHT-GIVPGVFSNNLKIT 616 (769)
Q Consensus 539 v~l~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~-l~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlKp~ 616 (769)
.....+... . .++||||++++++... +.. ..++.....+++.+++.++.|+|+ . +|+||||||+
T Consensus 82 ~~p~~~~~~--~-------~~lVmE~~~g~~~~~~~l~~--~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~ 147 (190)
T cd05145 82 PVPEPILLK--K-------NVLVMEFIGDDGSPAPRLKD--VPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEY 147 (190)
T ss_pred CCceEEEec--C-------CEEEEEEecCCCchhhhhhh--ccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChh
Confidence 554444322 1 3899999998855433 332 257788899999999999999999 8 9999999999
Q ss_pred ceeeCCCceeeecCCCCchhhh
Q 004195 617 DVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 617 NILld~~~~~kl~DFGla~~~~ 638 (769)
||+++ ++.++++|||++....
T Consensus 148 NIll~-~~~~~liDFG~a~~~~ 168 (190)
T cd05145 148 NILYH-DGKPYIIDVSQAVELD 168 (190)
T ss_pred hEEEE-CCCEEEEEcccceecC
Confidence 99999 8899999999986543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.4e-22 Score=199.21 Aligned_cols=302 Identities=18% Similarity=0.160 Sum_probs=177.3
Q ss_pred CCCCCCCCCcceEecCCCeeEEEeCCCCCCCCCCCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCc
Q 004195 60 FCNIEPTPSLTLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLE 139 (769)
Q Consensus 60 ~c~~~~~~~~~v~C~~~~v~~l~l~~~~~~~~~~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~ 139 (769)
+|...+.....|.|....++++.- ..+-......|-.|.++.+.+.+|+.+.+||.||||+|+|+.+-|++|.+|.+|.
T Consensus 40 pC~Cs~~~g~~VdCr~~GL~eVP~-~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~ 118 (498)
T KOG4237|consen 40 PCTCSDVEGGIVDCRGKGLTEVPA-NLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLL 118 (498)
T ss_pred CcccCCCCCceEEccCCCcccCcc-cCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhh
Confidence 454433223447776655555421 0011111122334555555555566666666666666666555566666665554
Q ss_pred eeeccC-cccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCc
Q 004195 140 ILNLSS-NYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSAN 218 (769)
Q Consensus 140 ~L~Ls~-N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N 218 (769)
.|-+-+ |+|+...-..|++|..|+.|.+.-|++.-.....|..|++|..|.|..|.+...--..|..+.+++.+.+..|
T Consensus 119 ~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~n 198 (498)
T KOG4237|consen 119 SLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQN 198 (498)
T ss_pred HHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcC
Confidence 443333 5565444445556666666666666665555555666666666666666555333335555666666665555
Q ss_pred ccccc--CC-----------CCCCCccCcEEeccCCcCCCCCcccc-cCCcEE--EeCCc-cccCCcCchhhcCCCcCcE
Q 004195 219 HLSGE--IP-----------DLRNLKNLRVFDVQDNYFGPRFPRLH-KKMVTL--VLRNN-RFQFGLNPDELRSYNQLQK 281 (769)
Q Consensus 219 ~l~~~--~p-----------~l~~l~~L~~l~l~~N~l~~~~p~~~-~~L~~L--~l~~N-~~~~~i~p~~~~~l~~L~~ 281 (769)
.+.-. +| .++..+-..-..+.++++...-+.-+ -.++.+ .++.+ ...+..+..-|..+++|+.
T Consensus 199 p~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~ 278 (498)
T KOG4237|consen 199 PFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRK 278 (498)
T ss_pred ccccccccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceE
Confidence 53210 00 01111111111222222211111100 011111 11112 1222222346899999999
Q ss_pred EeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCC
Q 004195 282 LDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCL 361 (769)
Q Consensus 282 L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l 361 (769)
|+|++|++++.-+.+|.++..++.|.|..|++...-...|..+..|+.|+|++|+++..-|..|.....+..+.+-.|.+
T Consensus 279 lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~ 358 (498)
T KOG4237|consen 279 LNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPF 358 (498)
T ss_pred eccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcc
Confidence 99999999999999999999999999999999988888899999999999999999999999999999999999888755
Q ss_pred C
Q 004195 362 S 362 (769)
Q Consensus 362 ~ 362 (769)
.
T Consensus 359 ~ 359 (498)
T KOG4237|consen 359 N 359 (498)
T ss_pred c
Confidence 3
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.8e-19 Score=176.14 Aligned_cols=138 Identities=14% Similarity=0.151 Sum_probs=108.0
Q ss_pred CCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhc-----cCCceeeEeeeeeccCCCCCCc
Q 004195 482 FDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKL-----RHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l-----~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.+....||+|+||.||. ++ ++.. +||++........+.+.+|+++++.+ .||||++++|++.+.... +
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~---g 77 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGT---G 77 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCC---e
Confidence 34568999999999996 44 4444 79998765445567899999999999 579999999999874321 1
Q ss_pred ceEEEEEec--cCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHh-cccccCCCCCccccCccccceeeCC----Cceeee
Q 004195 556 SIIYLIFEY--APNETLRSFISGPGYKLTWVQRIAAAIAIVKGV-QFLHTGIVPGVFSNNLKITDVLLDE----NFHVKI 628 (769)
Q Consensus 556 ~~~~lV~Ey--~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL-~yLH~~~~~~ivHrDlKp~NILld~----~~~~kl 628 (769)
..+.+|+|| +++|+|.+++.+. .+++. ..++.+++.++ +|||++ +|+||||||+|||++. ++.++|
T Consensus 78 ~v~~~I~e~~G~~~~tL~~~l~~~--~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~L 150 (210)
T PRK10345 78 YVYDVIADFDGKPSITLTEFAEQC--RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVV 150 (210)
T ss_pred EEEEEEecCCCCcchhHHHHHHcc--cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEE
Confidence 224489999 6689999999764 35555 35677888888 999999 9999999999999974 347999
Q ss_pred cCCC
Q 004195 629 NSYN 632 (769)
Q Consensus 629 ~DFG 632 (769)
+||+
T Consensus 151 iDg~ 154 (210)
T PRK10345 151 CDNI 154 (210)
T ss_pred EECC
Confidence 9954
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.7e-19 Score=194.58 Aligned_cols=211 Identities=22% Similarity=0.343 Sum_probs=153.4
Q ss_pred HhhccCCceeeEeeeeeccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCc-
Q 004195 530 ISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV- 608 (769)
Q Consensus 530 l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i- 608 (769)
|+.+.|.|+.+++|.+.++. ..++|.+||..|+|.|.+......++|.....+.++|++||+|+|+. +|
T Consensus 1 l~~l~h~n~~~f~g~~~~~~-------~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~ 70 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGP-------EMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNS---PIG 70 (484)
T ss_pred CcccchhhhhhheeeEecCC-------ceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcC---cce
Confidence 45789999999999999753 38999999999999999997777899999999999999999999986 44
Q ss_pred cccCccccceeeCCCceeeecCCCCchhhhcc----CCcceeecCCCcchhhhccC-------CCCCCCCeeehhHHHHH
Q 004195 609 FSNNLKITDVLLDENFHVKINSYNLPLLAEAR----GKGSAEVSSPAKKTSVLART-------EQDDKSDVYDIGIILIE 677 (769)
Q Consensus 609 vHrDlKp~NILld~~~~~kl~DFGla~~~~~~----~~~~~~~~~~~~~pe~~~~~-------~~~~ksDVwS~Gvil~e 677 (769)
.|+.++++|.++|..+.+|++|||+....... .........-|.+||..... ..+.++||||||++++|
T Consensus 71 ~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~e 150 (484)
T KOG1023|consen 71 YHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYE 150 (484)
T ss_pred eeeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHH
Confidence 99999999999999999999999998665321 01111111234456655432 25778999999999999
Q ss_pred HHhCCCCCCCchhH-HHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 678 IIVGRPITSENVVV-LVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 678 lltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
+++.+.||+..... ...+++..... .....+.|.+.... +...++..++..||..+|++||++++|-..+...
T Consensus 151 i~~r~~~~~~~~~~~~~~eii~~~~~---~~~~~~rP~i~~~~--e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~ 224 (484)
T KOG1023|consen 151 ILFRSGPFDLRNLVEDPDEIILRVKK---GGSNPFRPSIELLN--ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTI 224 (484)
T ss_pred HHhccCccccccccCChHHHHHHHHh---cCCCCcCcchhhhh--hcchHHHHHHHHhcccChhhCccHHHHHhhhhhh
Confidence 99999998753211 00122211000 11112223222111 2333588999999999999999999988776644
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.9e-19 Score=206.12 Aligned_cols=252 Identities=29% Similarity=0.375 Sum_probs=197.2
Q ss_pred EecCCCeeEEEeCCCCCCCCCCCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCc
Q 004195 72 VCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGS 151 (769)
Q Consensus 72 ~C~~~~v~~l~l~~~~~~~~~~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ 151 (769)
.|...+.+.|++.++.+..++ ..+. ++|+.|+|++|+++ .+|..+. .+|++|+|++|+|+ .
T Consensus 174 ~Cl~~~~~~L~L~~~~LtsLP-------------~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-s 234 (754)
T PRK15370 174 DCLKNNKTELRLKILGLTTIP-------------ACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-S 234 (754)
T ss_pred hhcccCceEEEeCCCCcCcCC-------------cccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-c
Confidence 566667788888776555322 2221 46899999999997 4676654 58999999999998 5
Q ss_pred CCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCc
Q 004195 152 IPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLK 231 (769)
Q Consensus 152 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~ 231 (769)
+|..+. .+|+.|+|++|+++ .+|..+. ++|+.|+|++|+++ .+|..+. ++|+.|++++|+|++.++.+. +
T Consensus 235 LP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~LP~~lp--~ 304 (754)
T PRK15370 235 IPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRTLPAHLP--S 304 (754)
T ss_pred CChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCccccCcccch--h
Confidence 787664 47999999999998 7787764 58999999999999 4777664 589999999999997544443 4
Q ss_pred cCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCC
Q 004195 232 NLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGN 311 (769)
Q Consensus 232 ~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N 311 (769)
+|+.|++++|.++...+....+|+.|++++|.++. + |..+. ++|+.|+|++|+|+. +|..+. ++|+.|+|++|
T Consensus 305 sL~~L~Ls~N~Lt~LP~~l~~sL~~L~Ls~N~Lt~-L-P~~l~--~sL~~L~Ls~N~L~~-LP~~lp--~~L~~LdLs~N 377 (754)
T PRK15370 305 GITHLNVQSNSLTALPETLPPGLKTLEAGENALTS-L-PASLP--PELQVLDVSKNQITV-LPETLP--PTITTLDVSRN 377 (754)
T ss_pred hHHHHHhcCCccccCCccccccceeccccCCcccc-C-Chhhc--CcccEEECCCCCCCc-CChhhc--CCcCEEECCCC
Confidence 78999999999986544456789999999999985 5 66553 689999999999984 666553 68999999999
Q ss_pred cCCccccccCCCCCCCcEEEccCCcCCCCCCccc----cccCCCceEECCCCCCCh
Q 004195 312 KLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCL----QVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 312 ~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~----~~~~~l~~l~l~~N~l~~ 363 (769)
+|+. +|..+. ..|+.|++++|+|+ .+|..+ ...+.+..+++.+|.++.
T Consensus 378 ~Lt~-LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls~ 429 (754)
T PRK15370 378 ALTN-LPENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFSE 429 (754)
T ss_pred cCCC-CCHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCccH
Confidence 9996 455443 36999999999998 455544 334677889999998863
|
|
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.2e-18 Score=209.17 Aligned_cols=237 Identities=20% Similarity=0.255 Sum_probs=135.5
Q ss_pred CCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEE
Q 004195 110 SLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVL 189 (769)
Q Consensus 110 ~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 189 (769)
.+.+|+.|+|++|++. .+|..+..+++|++|+|++|...+.+| .++.+++|++|+|++|.....+|.+++++++|+.|
T Consensus 609 ~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L 686 (1153)
T PLN03210 609 RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDL 686 (1153)
T ss_pred CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEE
Confidence 3456666666666653 355556666666666666654434555 36666666666666665555666666666666666
Q ss_pred eccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCccc-------------------
Q 004195 190 SLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRL------------------- 250 (769)
Q Consensus 190 ~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~------------------- 250 (769)
++++|..-+.+|..+ ++++|+.|++++|...+.+|.+ ..+|+.|++++|.+.. +|..
T Consensus 687 ~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~--~~nL~~L~L~~n~i~~-lP~~~~l~~L~~L~l~~~~~~~l 762 (1153)
T PLN03210 687 DMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI--STNISWLDLDETAIEE-FPSNLRLENLDELILCEMKSEKL 762 (1153)
T ss_pred eCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc--cCCcCeeecCCCcccc-ccccccccccccccccccchhhc
Confidence 666654444555544 5666666666666544444432 2345555555555432 2211
Q ss_pred --------------ccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCcc
Q 004195 251 --------------HKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGL 316 (769)
Q Consensus 251 --------------~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 316 (769)
..+|+.|+|++|...+.+ |..++++++|+.|++++|...+.+|..+ ++++|+.|+|++|..-..
T Consensus 763 ~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~l-P~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~ 840 (1153)
T PLN03210 763 WERVQPLTPLMTMLSPSLTRLFLSDIPSLVEL-PSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRT 840 (1153)
T ss_pred cccccccchhhhhccccchheeCCCCCCcccc-ChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccc
Confidence 134555666666555455 6666666666666666654444455444 556666666666544333
Q ss_pred ccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCC
Q 004195 317 LLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSK 358 (769)
Q Consensus 317 ~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~ 358 (769)
+|.. .++|+.|+|++|.++ .+|.++..+++|+.+++++
T Consensus 841 ~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~ 878 (1153)
T PLN03210 841 FPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNG 878 (1153)
T ss_pred cccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCC
Confidence 3332 245666677776666 4566666666777777665
|
syringae 6; Provisional |
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.6e-19 Score=170.79 Aligned_cols=182 Identities=14% Similarity=0.046 Sum_probs=130.7
Q ss_pred CCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCC----hhHHHHHHHHHhhcc-CCceeeEeeeeeccCCCCCCcce
Q 004195 483 DSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSS----PHMYTYHIELISKLR-HSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 483 ~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~----~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
.+...|++|+||+||.+.. ++..++.+.+....... ...+.+|+++|+++. |+++++++++..
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~~----------- 72 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWDG----------- 72 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEcC-----------
Confidence 3567899999999997765 67888888876543211 125789999999995 588999988621
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCc-cccceeeCCCceeeecCCCCchh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNL-KITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDl-Kp~NILld~~~~~kl~DFGla~~ 636 (769)
.+++|||++|.+|.+.+.. ....++.|++++|+++|+. ||+|||| ||+|||++.++.++|+|||+|..
T Consensus 73 ~~lvmeyI~G~~L~~~~~~--------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~ 141 (218)
T PRK12274 73 RHLDRSYLAGAAMYQRPPR--------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVR 141 (218)
T ss_pred EEEEEeeecCccHHhhhhh--------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCcee
Confidence 5899999999998764421 1134678999999999999 9999999 79999999999999999999974
Q ss_pred hhccCC---------------cceeecCCCcchhhhc-cCCCC-CCCCeeehhHHHHHHHhCCCCCCC
Q 004195 637 AEARGK---------------GSAEVSSPAKKTSVLA-RTEQD-DKSDVYDIGIILIEIIVGRPITSE 687 (769)
Q Consensus 637 ~~~~~~---------------~~~~~~~~~~~pe~~~-~~~~~-~ksDVwS~Gvil~elltG~~p~~~ 687 (769)
...... ....+++.+..|.... -...+ ...+.++-|.-+|.++||+-|...
T Consensus 142 ~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 142 GNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred cCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 432221 0011222222232211 11122 345778999999999999977543
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.2e-19 Score=167.00 Aligned_cols=203 Identities=14% Similarity=0.156 Sum_probs=153.5
Q ss_pred HHHHHHHhcCCCCcCccccCCceeEEEEE-eCCCcEEEEEEccccCCCChhHHHHHHHHHhhccC-CceeeEeeeeeccC
Q 004195 472 LDELKEATDCFDSSSFMCDASHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRH-SNLVSALGHCLDFS 549 (769)
Q Consensus 472 ~~el~~~t~~f~~~~~iG~G~~g~Vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H-~nIv~l~~~~~~~~ 549 (769)
.+++.. .+.|...+.||+|+||.+|.|. ..+|+.||||.-... ...-++..|..+.+.++| ..|..+..|..+..
T Consensus 8 ~~~~iv-~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~--a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ 84 (341)
T KOG1163|consen 8 LEELIV-GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSK--AKHPQLLYESKVYRILQGGVGIPHIRHYGTEKD 84 (341)
T ss_pred hhhhee-ccceEEEEeecCCchhheeeeeeccCCceEEEEeeccc--CCCcchhHHHHHHHHhccCCCCchhhhhccccc
Confidence 344433 3478889999999999999998 568999999986533 233467889999988875 55666555555433
Q ss_pred CCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC---cee
Q 004195 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN---FHV 626 (769)
Q Consensus 550 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~---~~~ 626 (769)
. -.+|||.. |.+|.++..-..+.++..+.+-.|-|++.-++|+|.+ ++|||||||+|+|..-+ ..+
T Consensus 85 y-------nvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl 153 (341)
T KOG1163|consen 85 Y-------NVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKL 153 (341)
T ss_pred c-------ceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceE
Confidence 3 58999998 7899999885555789999999999999999999999 99999999999999543 458
Q ss_pred eecCCCCchhhhccCC---------cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCc
Q 004195 627 KINSYNLPLLAEARGK---------GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSEN 688 (769)
Q Consensus 627 kl~DFGla~~~~~~~~---------~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~ 688 (769)
.++|||+|+...+..+ ....+++.|..--...+.+.+.+.|+=|+|.+|...--|..||.+-
T Consensus 154 ~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQgl 224 (341)
T KOG1163|consen 154 YLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGL 224 (341)
T ss_pred EEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCccccc
Confidence 8999999975533221 1122233333222233455678999999999999999999999864
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.3e-18 Score=199.42 Aligned_cols=237 Identities=27% Similarity=0.290 Sum_probs=182.1
Q ss_pred CeeEEEeCCCCCCCCC--------CCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCccc
Q 004195 77 NLTQLHIAGDNNNNIN--------GGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYL 148 (769)
Q Consensus 77 ~v~~l~l~~~~~~~~~--------~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l 148 (769)
+++.|.+.+|.+..++ .++++|.++. +|.. .++|+.|+|++|.++. +|..+ ++|+.|+|++|+|
T Consensus 223 ~L~~L~L~~N~Lt~LP~lp~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~Ls~N~L~~-Lp~lp---~~L~~L~Ls~N~L 294 (788)
T PRK15387 223 HITTLVIPDNNLTSLPALPPELRTLEVSGNQLTS-LPVL---PPGLLELSIFSNPLTH-LPALP---SGLCKLWIFGNQL 294 (788)
T ss_pred CCCEEEccCCcCCCCCCCCCCCcEEEecCCccCc-ccCc---ccccceeeccCCchhh-hhhch---hhcCEEECcCCcc
Confidence 4666666666554432 2344455443 2322 4689999999999864 55433 5688999999999
Q ss_pred CCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCCCC
Q 004195 149 SGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLR 228 (769)
Q Consensus 149 ~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~ 228 (769)
+ .+|.. +++|+.|+|++|+|++ +|... .+|+.|++++|++++ +|.. ..+|+.|+|++|+|++ +|.+
T Consensus 295 t-~LP~~---p~~L~~LdLS~N~L~~-Lp~lp---~~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~-LP~l- 360 (788)
T PRK15387 295 T-SLPVL---PPGLQELSVSDNQLAS-LPALP---SELCKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLAS-LPTL- 360 (788)
T ss_pred c-ccccc---ccccceeECCCCcccc-CCCCc---ccccccccccCcccc-cccc---ccccceEecCCCccCC-CCCC-
Confidence 8 56653 4789999999999995 55433 468889999999985 5642 2589999999999996 4443
Q ss_pred CCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEc
Q 004195 229 NLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDI 308 (769)
Q Consensus 229 ~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l 308 (769)
..+|+.|++++|.++. +|....+|..|++++|.+++ + |.. .++|+.|++++|+|++ +|.. ..+|+.|++
T Consensus 361 -p~~L~~L~Ls~N~L~~-LP~l~~~L~~LdLs~N~Lt~-L-P~l---~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~L 429 (788)
T PRK15387 361 -PSELYKLWAYNNRLTS-LPALPSGLKELIVSGNRLTS-L-PVL---PSELKELMVSGNRLTS-LPML---PSGLLSLSV 429 (788)
T ss_pred -Ccccceehhhcccccc-CcccccccceEEecCCcccC-C-CCc---ccCCCEEEccCCcCCC-CCcc---hhhhhhhhh
Confidence 3578889999999985 77777889999999999984 4 543 3679999999999986 5653 347889999
Q ss_pred cCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccc
Q 004195 309 HGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQV 347 (769)
Q Consensus 309 ~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~ 347 (769)
++|+|+ .+|..+..+++|+.|+|++|+|+|.+|..+..
T Consensus 430 s~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~~ 467 (788)
T PRK15387 430 YRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALRE 467 (788)
T ss_pred ccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHHHH
Confidence 999998 47888999999999999999999998887643
|
|
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.3e-17 Score=205.75 Aligned_cols=250 Identities=20% Similarity=0.194 Sum_probs=187.9
Q ss_pred ccccccCCCC-CCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCc
Q 004195 103 TFFSTLGSLS-SLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELS 181 (769)
Q Consensus 103 ~~~~~~~~l~-~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 181 (769)
.+|..|..++ +|+.|++.+|.+ ..+|..| ...+|+.|+|++|++. .+|..+..+++|+.|+|++|...+.+|. ++
T Consensus 579 ~lp~~~~~lp~~Lr~L~~~~~~l-~~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls 654 (1153)
T PLN03210 579 HLPEGFDYLPPKLRLLRWDKYPL-RCMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LS 654 (1153)
T ss_pred ecCcchhhcCcccEEEEecCCCC-CCCCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cc
Confidence 3455666653 588899988877 5677777 5789999999999998 6888899999999999998876567774 88
Q ss_pred CCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCC
Q 004195 182 LLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRN 261 (769)
Q Consensus 182 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~ 261 (769)
.+++|+.|+|++|.....+|..++++++|+.|++++|..-+.+|.-.++++|+.|++++|...+.+|....+|+.|+|++
T Consensus 655 ~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i~l~sL~~L~Lsgc~~L~~~p~~~~nL~~L~L~~ 734 (1153)
T PLN03210 655 MATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLKSFPDISTNISWLDLDE 734 (1153)
T ss_pred cCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcCCCCCCCEEeCCCCCCccccccccCCcCeeecCC
Confidence 99999999999988777899999999999999999986666677655899999999999987778888888999999999
Q ss_pred ccccCCcCchhh------------------------------cCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCC
Q 004195 262 NRFQFGLNPDEL------------------------------RSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGN 311 (769)
Q Consensus 262 N~~~~~i~p~~~------------------------------~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N 311 (769)
|.+. .+ |..+ ..+++|+.|+|++|...+.+|.+++++++|+.|++++|
T Consensus 735 n~i~-~l-P~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C 812 (1153)
T PLN03210 735 TAIE-EF-PSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENC 812 (1153)
T ss_pred Cccc-cc-cccccccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCC
Confidence 9876 34 4332 11235666666666666666666777777777777765
Q ss_pred cCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCC
Q 004195 312 KLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLS 362 (769)
Q Consensus 312 ~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~ 362 (769)
..-+.+|..+ .+++|+.|++++|.....+|.. ..+++.|++++|.++
T Consensus 813 ~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~ 859 (1153)
T PLN03210 813 INLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIE 859 (1153)
T ss_pred CCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECCCCCCc
Confidence 4444455544 5666777777766554455543 235666777777665
|
syringae 6; Provisional |
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.2e-18 Score=168.61 Aligned_cols=196 Identities=12% Similarity=0.137 Sum_probs=156.7
Q ss_pred CCCCcCccccCCceeEEEEE-eCCCcEEEEEEccccCCCChhHHHHHHHHHhhcc-CCceeeEeeeeeccCCCCCCcceE
Q 004195 481 CFDSSSFMCDASHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLR-HSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
.|.+.++||+|.||.++.|+ +-+++.||||.-... .+.-++..|.+..+.|. .+.|..++-|-.++. +-
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk--S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~-------~N 99 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK--SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGK-------YN 99 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEecccc--CCcchHHHHHHHHHHHcCCCCCCceeeeccccc-------hh
Confidence 57789999999999999999 558999999976432 33446778888888874 688888876655433 35
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC-----ceeeecCCCC
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN-----FHVKINSYNL 633 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~-----~~~kl~DFGl 633 (769)
.||+|.. |.||.|+..-.++.++..++.-||.|++.-++|+|++ .+|.|||||+|+||..- ..+.++|||+
T Consensus 100 iLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGm 175 (449)
T KOG1165|consen 100 ILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGM 175 (449)
T ss_pred hhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccc
Confidence 7999998 7899999987777899999999999999999999999 99999999999999643 4589999999
Q ss_pred chhhhccCC---------cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCch
Q 004195 634 PLLAEARGK---------GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENV 689 (769)
Q Consensus 634 a~~~~~~~~---------~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~ 689 (769)
|+.+.+... ....+++.||.--...+.+.+.+-|+=|+|-|++..+-|..||.+-.
T Consensus 176 AK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLK 240 (449)
T KOG1165|consen 176 AKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK 240 (449)
T ss_pred hhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccccc
Confidence 987654432 12233444554334456778889999999999999999999998643
|
|
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.75 E-value=4e-20 Score=204.86 Aligned_cols=240 Identities=28% Similarity=0.379 Sum_probs=154.4
Q ss_pred CCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEec
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL 191 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 191 (769)
.+|+++++++|++++ +|.+++.+.+|+.|+..+|+|+ .+|..+..+++|+.|.+.+|.++ .+|.....+++|++|+|
T Consensus 241 ~nl~~~dis~n~l~~-lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL 317 (1081)
T KOG0618|consen 241 LNLQYLDISHNNLSN-LPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDL 317 (1081)
T ss_pred ccceeeecchhhhhc-chHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeee
Confidence 345556666665543 3455566666666666666654 45555555566666666666555 45555555566666666
Q ss_pred cCCCCcccCCccccCCCC-CCEEEccCccccccCCCC--CCCccCcEEeccCCcCCCCCcc-c--ccCCcEEEeCCcccc
Q 004195 192 KNNSLSGFLPVSLTGLQS-LRVVSLSANHLSGEIPDL--RNLKNLRVFDVQDNYFGPRFPR-L--HKKMVTLVLRNNRFQ 265 (769)
Q Consensus 192 ~~N~l~~~~p~~l~~l~~-L~~L~ls~N~l~~~~p~l--~~l~~L~~l~l~~N~l~~~~p~-~--~~~L~~L~l~~N~~~ 265 (769)
..|+|....+..|.-+.. |+.|+.+.|.++.. |.. .....|+.|.+.+|+|+..... + +..|+.|+|++|+++
T Consensus 318 ~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~l-p~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~ 396 (1081)
T KOG0618|consen 318 QSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTL-PSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLN 396 (1081)
T ss_pred hhccccccchHHHhhhhHHHHHHhhhhcccccc-ccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccc
Confidence 666555322222222222 44444444444422 221 2345677788888888765433 2 578888899999887
Q ss_pred CCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCC-CCCcc
Q 004195 266 FGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTG-YLPSC 344 (769)
Q Consensus 266 ~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g-~~p~~ 344 (769)
.++...+.++..|++|+||+|.++. +|..+.+++.|++|...+|++... | .+..+++|+.+|+|.|+|+- .+|..
T Consensus 397 -~fpas~~~kle~LeeL~LSGNkL~~-Lp~tva~~~~L~tL~ahsN~l~~f-P-e~~~l~qL~~lDlS~N~L~~~~l~~~ 472 (1081)
T KOG0618|consen 397 -SFPASKLRKLEELEELNLSGNKLTT-LPDTVANLGRLHTLRAHSNQLLSF-P-ELAQLPQLKVLDLSCNNLSEVTLPEA 472 (1081)
T ss_pred -cCCHHHHhchHHhHHHhcccchhhh-hhHHHHhhhhhHHHhhcCCceeec-h-hhhhcCcceEEecccchhhhhhhhhh
Confidence 4545678888888899999998875 678888888888888888888753 4 77788899999999998873 34443
Q ss_pred ccccCCCceEECCCCC
Q 004195 345 LQVEAKTRLVLYSKNC 360 (769)
Q Consensus 345 ~~~~~~l~~l~l~~N~ 360 (769)
.. .++|+.|++++|.
T Consensus 473 ~p-~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 473 LP-SPNLKYLDLSGNT 487 (1081)
T ss_pred CC-CcccceeeccCCc
Confidence 32 2678888888885
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.4e-19 Score=190.19 Aligned_cols=237 Identities=16% Similarity=0.187 Sum_probs=183.0
Q ss_pred ccccCCceeEEEEE----eCCCcEEEEEEccccCCCC--hhHHHHHHHHHhhcc-CCceeeEeeeeeccCCCCCCcceEE
Q 004195 487 FMCDASHGQIYKGK----LTDGTLVAIRSLKMSKKSS--PHMYTYHIELISKLR-HSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 487 ~iG~G~~g~Vy~~~----~~~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
.+|+|.||.|+.++ .+.|..+|+|..++..... ......|..++..++ ||.+|++...+..... .+
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~k-------l~ 73 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGK-------LY 73 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccc-------hh
Confidence 36899999999875 2347889999987653211 124556788888887 9999999877765443 79
Q ss_pred EEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhc
Q 004195 560 LIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEA 639 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~ 639 (769)
++++|..+|+|...+.... ..+......+...++-|++++|+. +|+|||+|++||+++.+|++|+.|||+++..-.
T Consensus 74 l~ld~~rgg~lft~l~~~~-~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~ 149 (612)
T KOG0603|consen 74 LILDFLRGGDLFTRLSKEV-MFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVK 149 (612)
T ss_pred HhhhhcccchhhhccccCC-chHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHh
Confidence 9999999999998887554 566777777778899999999999 999999999999999999999999999976544
Q ss_pred cCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccCCC
Q 004195 640 RGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNEC 719 (769)
Q Consensus 640 ~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 719 (769)
.... +++.-|++||+.. .....+|.||||++++||+||-.||.. +....+.... ...
T Consensus 150 ~~~~--cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~---~~~~~Il~~~----------------~~~ 206 (612)
T KOG0603|consen 150 EKIA--CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG---DTMKRILKAE----------------LEM 206 (612)
T ss_pred hhhc--ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch---HHHHHHhhhc----------------cCC
Confidence 3332 5566778898875 567899999999999999999999976 2222222211 123
Q ss_pred CHHHHHHHHHHHHHcCcCCCCCCCC-----HHHHHHHhHhhhh
Q 004195 720 SDESLKRMMELCLRCLSNEPKDRPS-----VEDTLWNLQFATQ 757 (769)
Q Consensus 720 ~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~l~~~~~ 757 (769)
+.+....+.+++..+...+|..|-- ..|+.+|.++...
T Consensus 207 p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i 249 (612)
T KOG0603|consen 207 PRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSI 249 (612)
T ss_pred chhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheee
Confidence 4445555778888999999999964 5788888887654
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.2e-18 Score=177.03 Aligned_cols=235 Identities=15% Similarity=0.204 Sum_probs=145.2
Q ss_pred CcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC---ChhHHHHHHHHHhhcc----------CCceeeEeeeeeccC
Q 004195 484 SSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS---SPHMYTYHIELISKLR----------HSNLVSALGHCLDFS 549 (769)
Q Consensus 484 ~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~---~~~~~~~Ei~~l~~l~----------H~nIv~l~~~~~~~~ 549 (769)
....||.|+++.||.+++. +|+.+|||.+...... ..+++.+|.-....+. |-.++-.++...-..
T Consensus 16 ~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~ 95 (288)
T PF14531_consen 16 RGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPG 95 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETT
T ss_pred EccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcC
Confidence 4678999999999999976 6999999998755422 2345666654444432 212222222221111
Q ss_pred CC-----CCCcc-----eEEEEEeccCCCchhhhhc------CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCc
Q 004195 550 LD-----DPSIS-----IIYLIFEYAPNETLRSFIS------GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNL 613 (769)
Q Consensus 550 ~~-----~~~~~-----~~~lV~Ey~~~gsL~~~l~------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDl 613 (769)
.. .+... ..+++|+-+ .+||.+++. .....+....+..+..|+++.+++||+. |++|+||
T Consensus 96 ~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHgdi 171 (288)
T PF14531_consen 96 KPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHGDI 171 (288)
T ss_dssp S-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEEST-
T ss_pred CCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEeccc
Confidence 00 00011 236788888 469988765 1112355667888889999999999999 9999999
Q ss_pred cccceeeCCCceeeecCCCCchhhhccCCcceeecCCCcchhhhcc--------CCCCCCCCeeehhHHHHHHHhCCCCC
Q 004195 614 KITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLAR--------TEQDDKSDVYDIGIILIEIIVGRPIT 685 (769)
Q Consensus 614 Kp~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~--------~~~~~ksDVwS~Gvil~elltG~~p~ 685 (769)
||+|++++.+|.++++||+........... ......+.+||.... ..++.+.|.|++|+++|.|..|+.||
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~-~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf 250 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAGTRYRC-SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPF 250 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETTEEEEG-GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-ST
T ss_pred ceeeEEEcCCCCEEEcChHHHeecCceeec-cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCC
Confidence 999999999999999999876433322221 222334555654422 24788999999999999999999999
Q ss_pred CCchhHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCC
Q 004195 686 SENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDR 742 (769)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 742 (769)
+.........+ ....|. +.++.+.+||..+++++|.+|
T Consensus 251 ~~~~~~~~~~~------------------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 251 GLSSPEADPEW------------------DFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp CCCGGGSTSGG------------------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred CCCCccccccc------------------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 75432211110 123455 666779999999999999988
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.3e-18 Score=172.09 Aligned_cols=196 Identities=17% Similarity=0.226 Sum_probs=132.8
Q ss_pred cCCceeeEeeeeeccCCCC--------------------CCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHH
Q 004195 534 RHSNLVSALGHCLDFSLDD--------------------PSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAI 593 (769)
Q Consensus 534 ~H~nIv~l~~~~~~~~~~~--------------------~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~i 593 (769)
+|||||++.++|.+.-..- ......|+||.-++ .+|++++.... .+...+.-|..|+
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~~--~s~r~~~~~laQl 350 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTRH--RSYRTGRVILAQL 350 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcCC--CchHHHHHHHHHH
Confidence 6999999999886532110 12346799999886 49999997543 4555666678899
Q ss_pred HHHhcccccCCCCCccccCccccceee--CCCc--eeeecCCCCchhhhccC--------CcceeecCCCcchhhhccCC
Q 004195 594 VKGVQFLHTGIVPGVFSNNLKITDVLL--DENF--HVKINSYNLPLLAEARG--------KGSAEVSSPAKKTSVLARTE 661 (769)
Q Consensus 594 a~gL~yLH~~~~~~ivHrDlKp~NILl--d~~~--~~kl~DFGla~~~~~~~--------~~~~~~~~~~~~pe~~~~~~ 661 (769)
++|+.|||.+ +|.|||+|++|||+ |+|. ...|+|||++-..+..+ .....+....++||+....+
T Consensus 351 LEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~P 427 (598)
T KOG4158|consen 351 LEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVP 427 (598)
T ss_pred HHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCC
Confidence 9999999999 99999999999999 4554 36789999873222111 11112233446677654321
Q ss_pred ------CCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcC
Q 004195 662 ------QDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCL 735 (769)
Q Consensus 662 ------~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl 735 (769)
--.|+|.|+.|.+.||+++..-||+.......... ...+---|.+...+++. +.+++...+
T Consensus 428 Gp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r---------~Yqe~qLPalp~~vpp~----~rqlV~~lL 494 (598)
T KOG4158|consen 428 GPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTR---------TYQESQLPALPSRVPPV----ARQLVFDLL 494 (598)
T ss_pred CCceeeccchhhhhhhhhhHHHHhccCCcccccchheechh---------hhhhhhCCCCcccCChH----HHHHHHHHh
Confidence 13599999999999999999988876433221110 01111123343444444 888999999
Q ss_pred cCCCCCCCCHHHH
Q 004195 736 SNEPKDRPSVEDT 748 (769)
Q Consensus 736 ~~dP~~RPs~~ev 748 (769)
+.||++|++..-+
T Consensus 495 ~r~pskRvsp~iA 507 (598)
T KOG4158|consen 495 KRDPSKRVSPNIA 507 (598)
T ss_pred cCCccccCCccHH
Confidence 9999999986543
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.2e-20 Score=167.70 Aligned_cols=164 Identities=32% Similarity=0.468 Sum_probs=124.5
Q ss_pred cCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCC
Q 004195 108 LGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLS 187 (769)
Q Consensus 108 ~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 187 (769)
+.++++.+.|.||+|+++ .+|+.+..|.+|++|++++|++. .+|..++.|+.|+.|+++-|++. .+|..|+.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 445677777888888885 45667888888888888888887 68888888888888888888887 7788888888888
Q ss_pred EEeccCCCCc-ccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccC
Q 004195 188 VLSLKNNSLS-GFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQF 266 (769)
Q Consensus 188 ~L~L~~N~l~-~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~ 266 (769)
.|||.+|+++ ..+|..|..++.|+.|.|+.|.|.-.+|+.+++++|+.|.+.+|.+-
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~dndfe~lp~dvg~lt~lqil~lrdndll---------------------- 163 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPPDVGKLTNLQILSLRDNDLL---------------------- 163 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcCCCcccCChhhhhhcceeEEeeccCchh----------------------
Confidence 8888888875 45777888888888888888888777777777777777777777652
Q ss_pred CcCchhhcCCCcCcEEeccCccccccCCccCC
Q 004195 267 GLNPDELRSYNQLQKLDISLNRFVGPFIPSLL 298 (769)
Q Consensus 267 ~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 298 (769)
++ |.+++.+++|++|.+.+|+++- +|+.++
T Consensus 164 ~l-pkeig~lt~lrelhiqgnrl~v-lppel~ 193 (264)
T KOG0617|consen 164 SL-PKEIGDLTRLRELHIQGNRLTV-LPPELA 193 (264)
T ss_pred hC-cHHHHHHHHHHHHhcccceeee-cChhhh
Confidence 23 6777777777777777777653 444444
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.74 E-value=4e-18 Score=172.35 Aligned_cols=141 Identities=10% Similarity=0.080 Sum_probs=110.3
Q ss_pred CCCCcCccccCCceeEEEEE--eCCCcEEEEEEccccCCC-------------------C-----hhHHHHHHHHHhhcc
Q 004195 481 CFDSSSFMCDASHGQIYKGK--LTDGTLVAIRSLKMSKKS-------------------S-----PHMYTYHIELISKLR 534 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~--~~~g~~vAvK~~~~~~~~-------------------~-----~~~~~~Ei~~l~~l~ 534 (769)
.|...+.||+|++|.||+|+ ..+|+.||||.++..... . ...+.+|++++.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47788999999999999998 458999999999754210 0 023568999999997
Q ss_pred CCc--eeeEeeeeeccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCC-cccc
Q 004195 535 HSN--LVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPG-VFSN 611 (769)
Q Consensus 535 H~n--Iv~l~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-ivHr 611 (769)
+.. +.+++++. . .++||||+++++|........ .+...+...++.|++.+++|||+. + |+||
T Consensus 109 ~~~i~~p~~~~~~---~--------~~lV~E~~~g~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~ 173 (237)
T smart00090 109 EAGVPVPKPIAWR---R--------NVLVMEFIGGDGLPAPRLKDV-EPEEEEEFELYDDILEEMRKLYKE---GELVHG 173 (237)
T ss_pred hcCCCCCeeeEec---C--------ceEEEEEecCCcccccccccC-CcchHHHHHHHHHHHHHHHHHHhc---CCEEeC
Confidence 633 33444321 1 489999999988877653322 456666789999999999999999 8 9999
Q ss_pred CccccceeeCCCceeeecCCCCchhh
Q 004195 612 NLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 612 DlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
||||+||+++ +++++++|||.+...
T Consensus 174 Dikp~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 174 DLSEYNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred CCChhhEEEE-CCCEEEEEChhhhcc
Confidence 9999999999 889999999987643
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.73 E-value=9.9e-19 Score=196.74 Aligned_cols=240 Identities=16% Similarity=0.220 Sum_probs=168.8
Q ss_pred CCCCcCccccCCceeEEEEEeCCCcEEEEEEccccC-CCChhHHHHHHHH--HhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 481 CFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSK-KSSPHMYTYHIEL--ISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~-~~~~~~~~~Ei~~--l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
+|...+.+|++.|=.|.+|+.+.|. |+||++-+.+ .-.-+.|.++++- ...++|||.+.+.-+-.... .
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~k-------A 95 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDK-------A 95 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhH-------H
Confidence 4566788999999999999998887 8899987654 2233445444433 44558999998876644322 2
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh-
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL- 636 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~- 636 (769)
.|||=+|.. .+|+|.+..+. .+...+.+-|+.|++.||.-+|.. +|+|||||.+|||+..-.=+.++||..=+.
T Consensus 96 AylvRqyvk-hnLyDRlSTRP-FL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPt 170 (1431)
T KOG1240|consen 96 AYLVRQYVK-HNLYDRLSTRP-FLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPT 170 (1431)
T ss_pred HHHHHHHHh-hhhhhhhccch-HHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCc
Confidence 588889985 59999998543 578888999999999999999999 999999999999998877789999965321
Q ss_pred -hhccCCcc-------eeecCCCcchhhhccC----------C-CCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhh
Q 004195 637 -AEARGKGS-------AEVSSPAKKTSVLART----------E-QDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDL 696 (769)
Q Consensus 637 -~~~~~~~~-------~~~~~~~~~pe~~~~~----------~-~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~ 696 (769)
........ ..-..-|.+||.+... . .+++.||||.|||+.||++ |+|+|.- .++
T Consensus 171 YLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L------SQL 244 (1431)
T KOG1240|consen 171 YLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL------SQL 244 (1431)
T ss_pred cCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH------HHH
Confidence 11111100 0011234456554321 1 5789999999999999998 7888852 122
Q ss_pred hhhcccc----ccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHH
Q 004195 697 LQVNIGT----DEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWN 751 (769)
Q Consensus 697 ~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 751 (769)
.....+. ...+.++-|+ .+..++..|++.||++|.++++.|+.
T Consensus 245 ~aYr~~~~~~~e~~Le~Ied~------------~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 245 LAYRSGNADDPEQLLEKIEDV------------SLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred HhHhccCccCHHHHHHhCcCc------------cHHHHHHHHHccCchhccCHHHHHHh
Confidence 2111110 1112222232 27889999999999999999999986
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.2e-17 Score=165.38 Aligned_cols=144 Identities=13% Similarity=0.114 Sum_probs=111.9
Q ss_pred HHHHHHhcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCC----------------------ChhHHHHHHHHH
Q 004195 473 DELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKS----------------------SPHMYTYHIELI 530 (769)
Q Consensus 473 ~el~~~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~----------------------~~~~~~~Ei~~l 530 (769)
.++.+...-|...+.||+|+||.||+|..++|+.||||+++..... ....+.+|+.++
T Consensus 8 ~~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 87 (198)
T cd05144 8 HTLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAAL 87 (198)
T ss_pred HHHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHH
Confidence 4454444447778999999999999999888999999987643210 012367789999
Q ss_pred hhccCCc--eeeEeeeeeccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCc
Q 004195 531 SKLRHSN--LVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608 (769)
Q Consensus 531 ~~l~H~n--Iv~l~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i 608 (769)
.++.|++ +.+.++.+ ..++||||+++++|.+.... .....++.++++++.++|+. +|
T Consensus 88 ~~l~~~~i~v~~~~~~~-----------~~~lv~e~~~g~~L~~~~~~-------~~~~~~~~~i~~~l~~lh~~---gi 146 (198)
T cd05144 88 KALYEEGFPVPKPIDWN-----------RHAVVMEYIDGVELYRVRVL-------EDPEEVLDEILEEIVKAYKH---GI 146 (198)
T ss_pred HHHHHcCCCCCceeecC-----------CceEEEEEeCCcchhhcccc-------ccHHHHHHHHHHHHHHHHHC---CC
Confidence 9998874 44444321 14899999999998776431 23457889999999999998 99
Q ss_pred cccCccccceeeCCCceeeecCCCCchhh
Q 004195 609 FSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 609 vHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
+||||||+||++++++.++|+|||++...
T Consensus 147 ~H~Dl~p~Nill~~~~~~~liDfg~~~~~ 175 (198)
T cd05144 147 IHGDLSEFNILVDDDEKIYIIDWPQMVST 175 (198)
T ss_pred CcCCCCcccEEEcCCCcEEEEECCccccC
Confidence 99999999999999999999999998443
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.5e-17 Score=165.02 Aligned_cols=134 Identities=16% Similarity=0.280 Sum_probs=110.5
Q ss_pred CccccCCceeEEEEEeCCCcEEEEEEccccCCCC--------hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 486 SFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSS--------PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~--------~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
+.||+|++|.||+|+. +|..|+||+........ ...+.+|++++..++|++|.....++.+...
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~------- 73 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPEN------- 73 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCC-------
Confidence 5799999999999987 57789999865432211 1357789999999999998777766654322
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
.++||||++|++|.+++.... + .+..++.+++.+|+++|+. +++|||++|+||+++ ++.++++|||.+..
T Consensus 74 ~~lv~e~~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 74 FIIVMEYIEGEPLKDLINSNG----M-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred CEEEEEEeCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 689999999999999986432 2 7889999999999999998 999999999999999 78899999998754
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.9e-19 Score=161.77 Aligned_cols=157 Identities=29% Similarity=0.478 Sum_probs=116.7
Q ss_pred ccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCC
Q 004195 132 IAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLR 211 (769)
Q Consensus 132 ~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 211 (769)
+.++++.+.|-||+|+++ .+|+.+..|.+|+.|++++|+++ .+|.+++.+++|+.|+++-|++. .+|..|+.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 456778888999999998 78889999999999999999998 88999999999999999999988 7899999999999
Q ss_pred EEEccCccccc-cCCC-CCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccc
Q 004195 212 VVSLSANHLSG-EIPD-LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRF 289 (769)
Q Consensus 212 ~L~ls~N~l~~-~~p~-l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l 289 (769)
+|||+.|+++. .+|. +..++.|+-|++++|.|. +.|..++.+++||.|.+.+|.+
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~dndfe-----------------------~lp~dvg~lt~lqil~lrdndl 162 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-----------------------ILPPDVGKLTNLQILSLRDNDL 162 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcCCCcc-----------------------cCChhhhhhcceeEEeeccCch
Confidence 99999999864 2332 445555555555555442 2266666666677766666665
Q ss_pred cccCCccCCCCCCCCEEEccCCcCCc
Q 004195 290 VGPFIPSLLSLPSITYLDIHGNKLTG 315 (769)
Q Consensus 290 ~~~~~~~~~~l~~L~~L~l~~N~l~~ 315 (769)
-. +|..++.+..|+.|.+.+|+++-
T Consensus 163 l~-lpkeig~lt~lrelhiqgnrl~v 187 (264)
T KOG0617|consen 163 LS-LPKEIGDLTRLRELHIQGNRLTV 187 (264)
T ss_pred hh-CcHHHHHHHHHHHHhcccceeee
Confidence 43 45555555555555555555543
|
|
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.69 E-value=4.3e-17 Score=185.91 Aligned_cols=139 Identities=12% Similarity=0.180 Sum_probs=109.8
Q ss_pred HhcCCCCcCccccCCceeEEEEEeCCCcEEEEEE-ccccCCC-------ChhHHHHHHHHHhhccCCceeeEeeeeeccC
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRS-LKMSKKS-------SPHMYTYHIELISKLRHSNLVSALGHCLDFS 549 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~-~~~~~~~-------~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~ 549 (769)
....|...+.||+|+||+||+|.+.+.. +++|+ +...... ..+.+.+|++++++++|++++....++.+..
T Consensus 331 ~~~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~ 409 (535)
T PRK09605 331 VKRRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE 409 (535)
T ss_pred cccccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC
Confidence 3445567899999999999999976443 33333 2221111 1245889999999999999988777766532
Q ss_pred CCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeec
Q 004195 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKIN 629 (769)
Q Consensus 550 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~ 629 (769)
. .++||||+++++|.+++. .+..++.+++++|+|||+. +++|||+||+||++ +++.++|+
T Consensus 410 ~-------~~lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~li 469 (535)
T PRK09605 410 E-------KTIVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLI 469 (535)
T ss_pred C-------CEEEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEE
Confidence 2 589999999999998875 4567899999999999998 99999999999999 57889999
Q ss_pred CCCCchhh
Q 004195 630 SYNLPLLA 637 (769)
Q Consensus 630 DFGla~~~ 637 (769)
|||+++..
T Consensus 470 DFGla~~~ 477 (535)
T PRK09605 470 DFGLGKYS 477 (535)
T ss_pred eCcccccC
Confidence 99998653
|
|
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.69 E-value=5.2e-19 Score=196.17 Aligned_cols=243 Identities=29% Similarity=0.331 Sum_probs=190.8
Q ss_pred CCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEe
Q 004195 111 LSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLS 190 (769)
Q Consensus 111 l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 190 (769)
.++|+.|+.++|.++...+. .--.+|+++|+|.|+++ .+|++++.+.+|+.|+.++|+|+ .+|..+..+++|+.|+
T Consensus 218 g~~l~~L~a~~n~l~~~~~~--p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~ 293 (1081)
T KOG0618|consen 218 GPSLTALYADHNPLTTLDVH--PVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLS 293 (1081)
T ss_pred CcchheeeeccCcceeeccc--cccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHH
Confidence 35666677777776633222 22356888888888888 46788888888888888888885 7888888888888888
Q ss_pred ccCCCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCc-cCcEEeccCCcCCCCCccc----ccCCcEEEeCCccc
Q 004195 191 LKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLK-NLRVFDVQDNYFGPRFPRL----HKKMVTLVLRNNRF 264 (769)
Q Consensus 191 L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~-~L~~l~l~~N~l~~~~p~~----~~~L~~L~l~~N~~ 264 (769)
..+|.++ .+|....++++|+.|+|..|+|...++. +..+. .|+.|+.+.|.+... |.. +..|+.|++.+|.+
T Consensus 294 ~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~l-p~~~e~~~~~Lq~LylanN~L 371 (1081)
T KOG0618|consen 294 AAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTL-PSYEENNHAALQELYLANNHL 371 (1081)
T ss_pred hhhhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhcccccc-ccccchhhHHHHHHHHhcCcc
Confidence 8888888 5777778888888888888888755543 22222 366677777766532 222 45688999999999
Q ss_pred cCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCcc
Q 004195 265 QFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSC 344 (769)
Q Consensus 265 ~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~ 344 (769)
+-.. -..+....+|+.|+|++|++.......+.++..|+.|+||+|+++. +|..+..++.|+.|...+|++. ..| .
T Consensus 372 td~c-~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~~-Lp~tva~~~~L~tL~ahsN~l~-~fP-e 447 (1081)
T KOG0618|consen 372 TDSC-FPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLTT-LPDTVANLGRLHTLRAHSNQLL-SFP-E 447 (1081)
T ss_pred cccc-hhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhhh-hhHHHHhhhhhHHHhhcCCcee-ech-h
Confidence 9776 5678889999999999999987555568899999999999999987 5688999999999999999998 666 7
Q ss_pred ccccCCCceEECCCCCCCh
Q 004195 345 LQVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 345 ~~~~~~l~~l~l~~N~l~~ 363 (769)
+..++.++.++++.|.++.
T Consensus 448 ~~~l~qL~~lDlS~N~L~~ 466 (1081)
T KOG0618|consen 448 LAQLPQLKVLDLSCNNLSE 466 (1081)
T ss_pred hhhcCcceEEecccchhhh
Confidence 7888999999999999874
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.69 E-value=9e-19 Score=187.48 Aligned_cols=232 Identities=26% Similarity=0.240 Sum_probs=122.0
Q ss_pred ccCCCCCCcEEEeecccccCC----CCccccCCCcCceeeccCcccCC------cCCccccCCCcCCEEEcccCcCCccC
Q 004195 107 TLGSLSSLKVLSLVSLGLWGP----LPGSIAHSSSLEILNLSSNYLSG------SIPVQISSLRNLQTLILDDNKFTGAV 176 (769)
Q Consensus 107 ~~~~l~~L~~L~L~~n~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g------~~p~~~~~l~~L~~L~L~~N~l~~~~ 176 (769)
.+..+.+|+.|+++++.++.. ++..+...++|++|++++|.+.+ .++..+..+++|+.|+|++|.+.+..
T Consensus 18 ~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~ 97 (319)
T cd00116 18 LLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDG 97 (319)
T ss_pred HHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhH
Confidence 445556677777777776432 45556666667777777776652 23345666677777777777776555
Q ss_pred CccCcCCcC---CCEEeccCCCCcc----cCCccccCC-CCCCEEEccCccccccCC-----CCCCCccCcEEeccCCcC
Q 004195 177 PSELSLLQV---LSVLSLKNNSLSG----FLPVSLTGL-QSLRVVSLSANHLSGEIP-----DLRNLKNLRVFDVQDNYF 243 (769)
Q Consensus 177 p~~~~~l~~---L~~L~L~~N~l~~----~~p~~l~~l-~~L~~L~ls~N~l~~~~p-----~l~~l~~L~~l~l~~N~l 243 (769)
+..+..+.+ |++|++++|.+++ .+...+..+ ++|+.|++++|.+++... .+..++.|+.|++++|.+
T Consensus 98 ~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l 177 (319)
T cd00116 98 CGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGI 177 (319)
T ss_pred HHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCC
Confidence 555555544 7777777777662 223344555 677777777777663211 144455666666666666
Q ss_pred CCCC----ccc---ccCCcEEEeCCccccCCc---CchhhcCCCcCcEEeccCccccccCCccCC-----CCCCCCEEEc
Q 004195 244 GPRF----PRL---HKKMVTLVLRNNRFQFGL---NPDELRSYNQLQKLDISLNRFVGPFIPSLL-----SLPSITYLDI 308 (769)
Q Consensus 244 ~~~~----p~~---~~~L~~L~l~~N~~~~~i---~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-----~l~~L~~L~l 308 (769)
++.. +.. ..+|+.|++++|.+++.- ....+..+++|++|++++|.+++..+..+. ..+.|+.|++
T Consensus 178 ~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l 257 (319)
T cd00116 178 GDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSL 257 (319)
T ss_pred chHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEc
Confidence 5321 111 124555555555443210 012233444555555555554431111111 1244555555
Q ss_pred cCCcCCc----cccccCCCCCCCcEEEccCCcCC
Q 004195 309 HGNKLTG----LLLQNMSCNPQLAFVDLSSNLLT 338 (769)
Q Consensus 309 ~~N~l~~----~~~~~~~~l~~L~~l~l~~N~l~ 338 (769)
++|.++. .+...+..+++|+++++++|.++
T Consensus 258 ~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~ 291 (319)
T cd00116 258 SCNDITDDGAKDLAEVLAEKESLLELDLRGNKFG 291 (319)
T ss_pred cCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCc
Confidence 5555541 12223333345555555555554
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.8e-17 Score=160.27 Aligned_cols=130 Identities=15% Similarity=0.222 Sum_probs=103.1
Q ss_pred ccccCCceeEEEEEeCCCcEEEEEEccccCCCC--------hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 487 FMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSS--------PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 487 ~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~--------~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
.||+|++|.||+|.+ +|..|++|......... .+.+.+|++++..++|+++.....++.+... .
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~-------~ 72 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDN-------K 72 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC-------C
Confidence 489999999999985 57789999865332111 2456789999999998876544444443222 5
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
++||||++|++|.+++..... .++.+++++|+++|+. +++|||+||+||+++ ++.+++.|||++..
T Consensus 73 ~lv~e~~~g~~l~~~~~~~~~--------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 73 TIVMEYIEGKPLKDVIEEGND--------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred EEEEEEECCccHHHHHhhcHH--------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 899999999999998764321 7889999999999998 999999999999999 88999999998754
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.3e-18 Score=175.83 Aligned_cols=277 Identities=19% Similarity=0.200 Sum_probs=208.1
Q ss_pred ceEecCCCeeEEEeCCCCCCCCCCCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccC
Q 004195 70 TLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLS 149 (769)
Q Consensus 70 ~v~C~~~~v~~l~l~~~~~~~~~~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 149 (769)
..+|++..-..++-.+.++..++.+||. .-..++|..|+|+...|+.|+.+.+|+.||||+|.|+
T Consensus 40 pC~Cs~~~g~~VdCr~~GL~eVP~~LP~---------------~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is 104 (498)
T KOG4237|consen 40 PCTCSDVEGGIVDCRGKGLTEVPANLPP---------------ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNIS 104 (498)
T ss_pred CcccCCCCCceEEccCCCcccCcccCCC---------------cceEEEeccCCcccCChhhccchhhhceecccccchh
Confidence 3777652222334455555544444443 2356899999999888899999999999999999999
Q ss_pred CcCCccccCCCcCCEEEccc-CcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCC-CC
Q 004195 150 GSIPVQISSLRNLQTLILDD-NKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIP-DL 227 (769)
Q Consensus 150 g~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p-~l 227 (769)
.+-|.+|.+|.+|.+|-+.+ |+|+...-..|++|.+|+.|.+.-|++.......|..|++|..|.+..|.+..... .+
T Consensus 105 ~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf 184 (498)
T KOG4237|consen 105 FIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTF 184 (498)
T ss_pred hcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccc
Confidence 99999999999998887766 99996666789999999999999999999889999999999999999999975544 48
Q ss_pred CCCccCcEEeccCCcCCC--CCccc-------------ccCCcEEEeCCccccCCcCchhhcCCCcCcEE--eccCcc-c
Q 004195 228 RNLKNLRVFDVQDNYFGP--RFPRL-------------HKKMVTLVLRNNRFQFGLNPDELRSYNQLQKL--DISLNR-F 289 (769)
Q Consensus 228 ~~l~~L~~l~l~~N~l~~--~~p~~-------------~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L--~Ls~N~-l 289 (769)
..+..++.+.+..|.+-. .+|.. .....-..+.++++. .+.+..|... ++.+ .++.+. .
T Consensus 185 ~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~-q~~a~kf~c~--~esl~s~~~~~d~~ 261 (498)
T KOG4237|consen 185 QGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRIN-QEDARKFLCS--LESLPSRLSSEDFP 261 (498)
T ss_pred cchhccchHhhhcCccccccccchhhhHHhhchhhcccceecchHHHHHHHhc-ccchhhhhhh--HHhHHHhhccccCc
Confidence 888999999999997532 12211 111222233444443 2223333222 2222 222222 2
Q ss_pred cccCCc-cCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCChh
Q 004195 290 VGPFIP-SLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSNE 364 (769)
Q Consensus 290 ~~~~~~-~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~~ 364 (769)
.+.-|. .|..+++|+.|+|++|+++++-+.+|.....++.|.|..|++.-.-...|..++.|+.|++.+|+++..
T Consensus 262 d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~ 337 (498)
T KOG4237|consen 262 DSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTV 337 (498)
T ss_pred CCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEE
Confidence 333333 488999999999999999999999999999999999999999877777888899999999999998643
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.5e-18 Score=181.41 Aligned_cols=249 Identities=22% Similarity=0.189 Sum_probs=190.6
Q ss_pred EEEeeccccc-CCCCccccCCCcCceeeccCcccCCc----CCccccCCCcCCEEEcccCcCCc------cCCccCcCCc
Q 004195 116 VLSLVSLGLW-GPLPGSIAHSSSLEILNLSSNYLSGS----IPVQISSLRNLQTLILDDNKFTG------AVPSELSLLQ 184 (769)
Q Consensus 116 ~L~L~~n~l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~L~~N~l~~------~~p~~~~~l~ 184 (769)
.|+|..+.++ ...+..+..+.+|+.|+++++.++.. ++..+...++|++|++++|.+.+ .++..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 4678888887 45667788889999999999998543 66677788899999999998872 3445678899
Q ss_pred CCCEEeccCCCCcccCCccccCCCC---CCEEEccCcccccc----CC-CCCCC-ccCcEEeccCCcCCCCCcc------
Q 004195 185 VLSVLSLKNNSLSGFLPVSLTGLQS---LRVVSLSANHLSGE----IP-DLRNL-KNLRVFDVQDNYFGPRFPR------ 249 (769)
Q Consensus 185 ~L~~L~L~~N~l~~~~p~~l~~l~~---L~~L~ls~N~l~~~----~p-~l~~l-~~L~~l~l~~N~l~~~~p~------ 249 (769)
+|+.|+|++|.+.+..+..+..+.+ |++|++++|++++. +. .+..+ ++|+.|++++|.+++....
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 161 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKAL 161 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHH
Confidence 9999999999998777777766666 99999999999742 11 24566 8999999999999854221
Q ss_pred -cccCCcEEEeCCccccCCcC---chhhcCCCcCcEEeccCcccccc----CCccCCCCCCCCEEEccCCcCCccccccC
Q 004195 250 -LHKKMVTLVLRNNRFQFGLN---PDELRSYNQLQKLDISLNRFVGP----FIPSLLSLPSITYLDIHGNKLTGLLLQNM 321 (769)
Q Consensus 250 -~~~~L~~L~l~~N~~~~~i~---p~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 321 (769)
....|+.|++++|.+++... +..+..+++|+.|+|++|.+.+. +...+..+++|++|++++|.+++.....+
T Consensus 162 ~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l 241 (319)
T cd00116 162 RANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAAL 241 (319)
T ss_pred HhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHH
Confidence 13579999999999984221 33456667999999999998743 33456678999999999999986333322
Q ss_pred C-----CCCCCcEEEccCCcCC----CCCCccccccCCCceEECCCCCCChh
Q 004195 322 S-----CNPQLAFVDLSSNLLT----GYLPSCLQVEAKTRLVLYSKNCLSNE 364 (769)
Q Consensus 322 ~-----~l~~L~~l~l~~N~l~----g~~p~~~~~~~~l~~l~l~~N~l~~~ 364 (769)
. ..+.|+.|++++|.++ ..+...+...++++.+++++|.++..
T Consensus 242 ~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~ 293 (319)
T cd00116 242 ASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEE 293 (319)
T ss_pred HHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHH
Confidence 2 2478999999999997 23334455567899999999998754
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.1e-17 Score=172.47 Aligned_cols=243 Identities=14% Similarity=0.235 Sum_probs=157.8
Q ss_pred cCccccCCceeEEEEEeCC----CcEEEEEEccccCCCChhHHHHHHHHHhhc-cCCceeeEee-------eeeccCCCC
Q 004195 485 SSFMCDASHGQIYKGKLTD----GTLVAIRSLKMSKKSSPHMYTYHIELISKL-RHSNLVSALG-------HCLDFSLDD 552 (769)
Q Consensus 485 ~~~iG~G~~g~Vy~~~~~~----g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~-------~~~~~~~~~ 552 (769)
.+-.+..+++.++...... .+.++.|..+...........+++-.+.-. +|+..+ +.+ ...... -
T Consensus 249 ~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~d~~~~~~~~~r~~~~l~~~~~~~~s~-~~d~~~s~~~~~~~~~--v 325 (516)
T KOG1033|consen 249 SKSSERVSSGIVFEKQGKNNSSLREWLKSKRADVDSLCACKYTFRQLGVLVDSSHSNRSI-LEDLRPSLFESSKRNK--V 325 (516)
T ss_pred cccccccccCCchhhhhcccchhhhhccchhhhccchhhhhhhhhhhhheeccccCCccc-ccCCCCchhhhccccc--c
Confidence 4455556666666554322 234444444433312223344455544444 344433 222 011100 0
Q ss_pred CCcceEEEEEeccCCCchhhhhc--CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecC
Q 004195 553 PSISIIYLIFEYAPNETLRSFIS--GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINS 630 (769)
Q Consensus 553 ~~~~~~~lV~Ey~~~gsL~~~l~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~D 630 (769)
......|+.|++|...+|.+|+. +.....+|.....++.|++.|++| + +.+|||+||.||+...+..+||.|
T Consensus 326 ~~~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgD 399 (516)
T KOG1033|consen 326 GKKVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGD 399 (516)
T ss_pred ccccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhh
Confidence 11235789999999999999996 444567899999999999999999 5 899999999999999999999999
Q ss_pred CCCchhhhccC--------CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhcc
Q 004195 631 YNLPLLAEARG--------KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNI 701 (769)
Q Consensus 631 FGla~~~~~~~--------~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~ 701 (769)
||+........ .....++.-|+.||.+.+..|+.|+||||+|+||+|+++ =...+.. ...
T Consensus 400 Fgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er-----~~t------ 468 (516)
T KOG1033|consen 400 FGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFER-----IAT------ 468 (516)
T ss_pred hhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHH-----HHh------
Confidence 99974433222 233345556778999999999999999999999999997 2222110 000
Q ss_pred ccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 702 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
..+.....++|....+++.+ ..++.+++.+.|.+||++.++..+.+
T Consensus 469 -~~d~r~g~ip~~~~~d~p~e-----~~ll~~lls~~p~~RP~~~~~~~~~~ 514 (516)
T KOG1033|consen 469 -LTDIRDGIIPPEFLQDYPEE-----YTLLQQLLSPSPEERPSAIEVALHEF 514 (516)
T ss_pred -hhhhhcCCCChHHhhcCcHH-----HHHHHHhcCCCcccCchHHHHhhhhh
Confidence 01112223444444455543 46788999999999997777666654
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.3e-16 Score=179.43 Aligned_cols=160 Identities=29% Similarity=0.410 Sum_probs=124.6
Q ss_pred ccCCHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCCCCCCcceEecCCCeeEEEeCCCCCCCCCCCCCCCCCCCccc
Q 004195 26 NQLQLFQYQTLVRIQQLLNYPSVSSSFNTTTVTDFCNIEPTPSLTLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFF 105 (769)
Q Consensus 26 ~~~~~~~~~~ll~~k~~~~~~~~l~~w~~~~~~~~c~~~~~~~~~v~C~~~~v~~l~l~~~~~~~~~~~l~~n~~~~~~~ 105 (769)
..+.+.|.+||+++|..+.++.. .+|+. ++|.....+|.||.|.....+
T Consensus 367 ~~t~~~~~~aL~~~k~~~~~~~~-~~W~g----~~C~p~~~~w~Gv~C~~~~~~-------------------------- 415 (623)
T PLN03150 367 SKTLLEEVSALQTLKSSLGLPLR-FGWNG----DPCVPQQHPWSGADCQFDSTK-------------------------- 415 (623)
T ss_pred cccCchHHHHHHHHHHhcCCccc-CCCCC----CCCCCcccccccceeeccCCC--------------------------
Confidence 34567799999999999876643 47963 456322223456999532110
Q ss_pred cccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcC
Q 004195 106 STLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQV 185 (769)
Q Consensus 106 ~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 185 (769)
....++.|+|++|.+.|.+|..|+++++|+.|+|++|+|+|.+|..++.|++|+.|+|++|+++|.+|..+++|++
T Consensus 416 ----~~~~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~ 491 (623)
T PLN03150 416 ----GKWFIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTS 491 (623)
T ss_pred ----CceEEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCC
Confidence 0113567888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEeccCCCCcccCCccccCC-CCCCEEEccCccc
Q 004195 186 LSVLSLKNNSLSGFLPVSLTGL-QSLRVVSLSANHL 220 (769)
Q Consensus 186 L~~L~L~~N~l~~~~p~~l~~l-~~L~~L~ls~N~l 220 (769)
|++|+|++|+++|.+|..++++ .++..+++++|..
T Consensus 492 L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~N~~ 527 (623)
T PLN03150 492 LRILNLNGNSLSGRVPAALGGRLLHRASFNFTDNAG 527 (623)
T ss_pred CCEEECcCCcccccCChHHhhccccCceEEecCCcc
Confidence 9999999999999999888764 4566777777754
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.1e-16 Score=182.21 Aligned_cols=196 Identities=14% Similarity=0.189 Sum_probs=143.5
Q ss_pred HHHHHhcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhcc---CCceeeEeeeeeccCC
Q 004195 474 ELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLR---HSNLVSALGHCLDFSL 550 (769)
Q Consensus 474 el~~~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~---H~nIv~l~~~~~~~~~ 550 (769)
+.....+.|.+.+.||+|+||.||+|...+|+.||+|.=+..... +|---.+++.||+ -+-|..+...+.-.
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~-- 766 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQ-- 766 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccC--
Confidence 444456678899999999999999999888999999987754322 2222233445554 12233322222211
Q ss_pred CCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeC-------CC
Q 004195 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD-------EN 623 (769)
Q Consensus 551 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld-------~~ 623 (769)
+.-++|+||.+.|+|.+++.. ...++|...+.++.|+++-++.||.. +|||+||||+|.||. +.
T Consensus 767 -----~~S~lv~ey~~~Gtlld~~N~-~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~ 837 (974)
T KOG1166|consen 767 -----NASVLVSEYSPYGTLLDLINT-NKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDS 837 (974)
T ss_pred -----CcceeeeeccccccHHHhhcc-CCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcc
Confidence 125899999999999999984 34799999999999999999999999 999999999999993 23
Q ss_pred ceeeecCCCCchhhh---ccC-CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCC
Q 004195 624 FHVKINSYNLPLLAE---ARG-KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRP 683 (769)
Q Consensus 624 ~~~kl~DFGla~~~~---~~~-~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~ 683 (769)
..++|+|||.+-.+. +.. ......+...-..|...+..++..+|-|.+..+++-|+.|+.
T Consensus 838 ~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 838 KGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred cceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 458999999984332 221 111222223334667778889999999999999999999974
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.63 E-value=8.3e-16 Score=150.85 Aligned_cols=135 Identities=13% Similarity=0.139 Sum_probs=97.5
Q ss_pred cCccccCCceeEEEEEeCCCcEEEEEEccccCCCC--hhH----------------------HHHHHHHHhhccCCc--e
Q 004195 485 SSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSS--PHM----------------------YTYHIELISKLRHSN--L 538 (769)
Q Consensus 485 ~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~--~~~----------------------~~~Ei~~l~~l~H~n--I 538 (769)
.+.||+|+||+||+|+..+|+.||||+++...... ... ...|.+.+.++++.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 46799999999999998889999999987542211 111 135666666665433 3
Q ss_pred eeEeeeeeccCCCCCCcceEEEEEeccCCCchhh-hhcCCCCCCCHHHHHHHHHHHHHHhccccc-CCCCCccccCcccc
Q 004195 539 VSALGHCLDFSLDDPSISIIYLIFEYAPNETLRS-FISGPGYKLTWVQRIAAAIAIVKGVQFLHT-GIVPGVFSNNLKIT 616 (769)
Q Consensus 539 v~l~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~-~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlKp~ 616 (769)
.+.+++. ..++||||++++++.. .+.... .. .+..+++.+++.++.++|. . +|+||||||+
T Consensus 82 ~~~~~~~-----------~~~lv~e~~~g~~~~~~~l~~~~--~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~ 144 (187)
T cd05119 82 PKPIDLN-----------RHVLVMEFIGGDGIPAPRLKDVR--LL-EDPEELYDQILELMRKLYREA---GLVHGDLSEY 144 (187)
T ss_pred CceEecC-----------CCEEEEEEeCCCCccChhhhhhh--hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChh
Confidence 4444332 1589999999855432 121111 11 5677889999999999999 7 9999999999
Q ss_pred ceeeCCCceeeecCCCCchhh
Q 004195 617 DVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 617 NILld~~~~~kl~DFGla~~~ 637 (769)
||+++ ++.++++|||.+...
T Consensus 145 Nili~-~~~~~liDfg~a~~~ 164 (187)
T cd05119 145 NILVD-DGKVYIIDVPQAVEI 164 (187)
T ss_pred hEEEE-CCcEEEEECcccccc
Confidence 99999 899999999998544
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.4e-16 Score=175.77 Aligned_cols=216 Identities=17% Similarity=0.272 Sum_probs=147.0
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
.++|+.++.|..|+||.||.++++ ..+.+|+| +.+.. . |+ +||..+.|-
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~-----l------il-----Rnilt~a~n------------- 131 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQN-----L------IL-----RNILTFAGN------------- 131 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhc-ccccc-----h------hh-----hccccccCC-------------
Confidence 357889999999999999999987 57788884 33221 1 11 123322211
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.+.| ||=...++..+ +++. +.+.+++|+|+. +|+|||+||+|.++..-|++|+.|||+++..
T Consensus 132 pfvv------gDc~tllk~~g-~lPv--------dmvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~G 193 (1205)
T KOG0606|consen 132 PFVV------GDCATLLKNIG-PLPV--------DMVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKG 193 (1205)
T ss_pred ccee------chhhhhcccCC-CCcc--------hhhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhh
Confidence 2333 45455555332 3332 227799999999 9999999999999999999999999998642
Q ss_pred hcc-----------------CCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhh
Q 004195 638 EAR-----------------GKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQV 699 (769)
Q Consensus 638 ~~~-----------------~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~ 699 (769)
-.. .....+++..|.+||++....|+..+|.|++|+|+||.+.|+.||.++..+ .+...+..
T Consensus 194 Lms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd 273 (1205)
T KOG0606|consen 194 LMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISD 273 (1205)
T ss_pred hhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhh
Confidence 100 112335666778899999999999999999999999999999888776433 33332221
Q ss_pred ccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCC---CHHHHHHHhHhh
Q 004195 700 NIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRP---SVEDTLWNLQFA 755 (769)
Q Consensus 700 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP---s~~evl~~l~~~ 755 (769)
.+ .|.+- | +....++.+++.+.++.+|..|- .+-+|-+|-+|.
T Consensus 274 ~i----~wpE~-d--------ea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~ 319 (1205)
T KOG0606|consen 274 DI----EWPEE-D--------EALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQ 319 (1205)
T ss_pred hc----ccccc-C--------cCCCHHHHHHHHHHHHhChHhhcccchhhhhhhcccee
Confidence 11 11111 2 12223488999999999999994 455666666554
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.61 E-value=4e-15 Score=140.17 Aligned_cols=135 Identities=14% Similarity=0.115 Sum_probs=112.3
Q ss_pred CcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccC--CceeeEeeeeeccCCCCCCcceEEEE
Q 004195 484 SSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRH--SNLVSALGHCLDFSLDDPSISIIYLI 561 (769)
Q Consensus 484 ~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H--~nIv~l~~~~~~~~~~~~~~~~~~lV 561 (769)
+.+.||+|.++.||+++..+ ..+++|....... ...+.+|+.++..++| .+++++++++... +..+++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~-------~~~~~v 71 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESD-------GWSYLL 71 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCC-------CccEEE
Confidence 35789999999999999854 7899999865433 4678999999999986 5888888877543 237999
Q ss_pred EeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 562 FEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 562 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
|||++++.+..+ +......++.+++++++++|.....+++|+|+||+||++++.+.+++.|||.+..
T Consensus 72 ~e~~~g~~~~~~--------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 72 MEWIEGETLDEV--------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred EEecCCeecccC--------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 999998777654 5667788899999999999986545799999999999999989999999998754
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.1e-14 Score=147.69 Aligned_cols=139 Identities=14% Similarity=0.134 Sum_probs=106.9
Q ss_pred cCccc-cCCceeEEEEEeCCCcEEEEEEccccC-------------CCChhHHHHHHHHHhhccCCce--eeEeeeeecc
Q 004195 485 SSFMC-DASHGQIYKGKLTDGTLVAIRSLKMSK-------------KSSPHMYTYHIELISKLRHSNL--VSALGHCLDF 548 (769)
Q Consensus 485 ~~~iG-~G~~g~Vy~~~~~~g~~vAvK~~~~~~-------------~~~~~~~~~Ei~~l~~l~H~nI--v~l~~~~~~~ 548 (769)
...|| .||.|+||++... +..+|||++.... ......+.+|++++.+++|++| ++.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 46788 8999999999885 6789999885321 1123467889999999998875 6777765432
Q ss_pred CCCCCCcceEEEEEeccCC-CchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceee
Q 004195 549 SLDDPSISIIYLIFEYAPN-ETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVK 627 (769)
Q Consensus 549 ~~~~~~~~~~~lV~Ey~~~-gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~k 627 (769)
.. .....++||||+++ .+|.+++... .++.. .+.++++++.+||+. ||+||||||+|||++.++.++
T Consensus 115 ~~---~~~~~~lV~e~l~G~~~L~~~l~~~--~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~ 182 (239)
T PRK01723 115 HG---LFYRADILIERIEGARDLVALLQEA--PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFW 182 (239)
T ss_pred cC---cceeeeEEEEecCCCCCHHHHHhcC--CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEE
Confidence 11 11224699999997 6899888653 34443 356899999999999 999999999999999989999
Q ss_pred ecCCCCchh
Q 004195 628 INSYNLPLL 636 (769)
Q Consensus 628 l~DFGla~~ 636 (769)
|+|||.+..
T Consensus 183 LIDfg~~~~ 191 (239)
T PRK01723 183 LIDFDRGEL 191 (239)
T ss_pred EEECCCccc
Confidence 999998754
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.49 E-value=6.9e-15 Score=166.99 Aligned_cols=254 Identities=18% Similarity=0.178 Sum_probs=184.6
Q ss_pred CCCCcCccccCCceeEEEEEeC--CCcEEEEEEccccC--CCChhHHHHHHHHHhhcc-CCceeeEeeeeeccCCCCCCc
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT--DGTLVAIRSLKMSK--KSSPHMYTYHIELISKLR-HSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~--~g~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.|...+.||+|+|+.|-..... ....+|+|.+.... ....+....|..+-+.+. |+|++++++...+.+.
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~----- 95 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRS----- 95 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcc-----
Confidence 4556677999999999888753 35577888776543 222344555888877776 9999999998765443
Q ss_pred ceEEEEEeccCCCchhhhh-cCCCCCCCHHHHHHHHHHHHHHhcccc-cCCCCCccccCccccceeeCCCc-eeeecCCC
Q 004195 556 SIIYLIFEYAPNETLRSFI-SGPGYKLTWVQRIAAAIAIVKGVQFLH-TGIVPGVFSNNLKITDVLLDENF-HVKINSYN 632 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l-~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~~~ivHrDlKp~NILld~~~-~~kl~DFG 632 (769)
.++++||..++++.+.+ +......+......+..|+..|+.|+| .. ++.|||+||+|.+++..+ ..|++|||
T Consensus 96 --~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~ 170 (601)
T KOG0590|consen 96 --YLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFG 170 (601)
T ss_pred --cccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCch
Confidence 79999999999999999 533324566677788999999999999 77 999999999999999999 99999999
Q ss_pred Cchhhhc-cCC----cceee-cCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchhHHH--Hhhhhhcccc
Q 004195 633 LPLLAEA-RGK----GSAEV-SSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVVVLV--KDLLQVNIGT 703 (769)
Q Consensus 633 la~~~~~-~~~----~~~~~-~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~--~~~~~~~~~~ 703 (769)
+|..... .+. ....+ ..+|.+||...+. -..+..|+||.|+++.-+++|..|++....... ..|....
T Consensus 171 ~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~--- 247 (601)
T KOG0590|consen 171 LATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNK--- 247 (601)
T ss_pred hhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccc---
Confidence 9965543 221 11233 5677788877664 347889999999999999999988864332211 1111000
Q ss_pred ccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 704 DEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 704 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.......... ......++..+++..+|..|.+.+++-.+.|...
T Consensus 248 -----~~~~~~~~~~----~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 248 -----GRFTQLPWNS----ISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred -----cccccCcccc----CChhhhhcccccccCCchhccccccccccccccc
Confidence 0000111112 2233677888999999999999999999999876
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.2e-14 Score=141.22 Aligned_cols=206 Identities=21% Similarity=0.274 Sum_probs=139.8
Q ss_pred HHHHhhccCCceeeEeeeeeccCCCCCCcceEEEEEeccCCCchhhhhc---CCCCCCCHHHHHHHHHHHHHHhcccccC
Q 004195 527 IELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFIS---GPGYKLTWVQRIAAAIAIVKGVQFLHTG 603 (769)
Q Consensus 527 i~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~ 603 (769)
..-+-++-|.|||+++.|+.+..+.+ .....++.|||..|++..+|+ +.+..+....-.+++-||..||.|||+
T Consensus 118 FdnllqlvHsnlvkfH~yw~d~K~~e--~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs- 194 (458)
T KOG1266|consen 118 FDNLLQLVHSNLVKFHKYWTDKKYEE--KPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS- 194 (458)
T ss_pred HHHHHHHHHHHHHHHHHhhccccccc--ccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-
Confidence 34455667999999999987655522 345788999999999999997 344567777788999999999999998
Q ss_pred CCCCccccCccccceeeCCCceeeecCCCCchh------hhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHH
Q 004195 604 IVPGVFSNNLKITDVLLDENFHVKINSYNLPLL------AEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIE 677 (769)
Q Consensus 604 ~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~------~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~e 677 (769)
|.|+|+|+++..+-|++..++-+|+.----... .............++.+|+.-.....+.++|||+||+..+|
T Consensus 195 ~~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAle 274 (458)
T KOG1266|consen 195 CDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALE 274 (458)
T ss_pred cCCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHH
Confidence 799999999999999999999888853211100 00111111122334455665555567789999999999999
Q ss_pred HHhCCC-CCCCchhHHHHhhh-hhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 678 IIVGRP-ITSENVVVLVKDLL-QVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 678 lltG~~-p~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
|..+.- +...........-+ ...+... ++. =.+++.+|++..|..||+|.+.+.|+-.
T Consensus 275 mailEiq~tnseS~~~~ee~ia~~i~~le-------n~l------------qr~~i~kcl~~eP~~rp~ar~llfHpll 334 (458)
T KOG1266|consen 275 MAILEIQSTNSESKVEVEENIANVIIGLE-------NGL------------QRGSITKCLEGEPNGRPDARLLLFHPLL 334 (458)
T ss_pred HHHheeccCCCcceeehhhhhhhheeecc-------Ccc------------ccCcCcccccCCCCCCcchhhhhcCcee
Confidence 998863 22221111111100 0000000 010 1346779999999999999999998753
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.4e-13 Score=151.65 Aligned_cols=142 Identities=16% Similarity=0.120 Sum_probs=100.6
Q ss_pred cCccccCCceeEEEEEeCCCcEEEEEEccccCCC--------------------------C--------------hhHHH
Q 004195 485 SSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKS--------------------------S--------------PHMYT 524 (769)
Q Consensus 485 ~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~--------------------------~--------------~~~~~ 524 (769)
.+.||+|++|.||+|++++|+.||||+.+..-.. + +-+|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 4679999999999999999999999998643100 0 01245
Q ss_pred HHHHHHhhcc----CCceeeEeeeeeccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHH-Hhcc
Q 004195 525 YHIELISKLR----HSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVK-GVQF 599 (769)
Q Consensus 525 ~Ei~~l~~l~----H~nIv~l~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~-gL~y 599 (769)
+|.+.+.+++ |.+-|.+-.+|.+... ..+|||||++|++|.++........ .+.+++..+++ .+..
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~------~~vLvmE~i~G~~L~~~~~~~~~~~---~~~~ia~~~~~~~l~q 272 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTS------ERVLTMEWIDGIPLSDIAALDEAGL---DRKALAENLARSFLNQ 272 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcC------CceEEEEeECCcccccHHHHHhcCC---CHHHHHHHHHHHHHHH
Confidence 5666555552 3333444444433211 2589999999999998765221122 24556666666 4678
Q ss_pred cccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 600 LHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 600 LH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
+|.. |++|+|+||.||++++++++++.|||++....
T Consensus 273 l~~~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 273 VLRD---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred HHhC---CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 8888 99999999999999999999999999986543
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.4e-14 Score=153.22 Aligned_cols=174 Identities=28% Similarity=0.347 Sum_probs=138.9
Q ss_pred CCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEe
Q 004195 111 LSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLS 190 (769)
Q Consensus 111 l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 190 (769)
++--...||+.|++ ..+|..+..+..|+.|.|..|.+. .+|..+++|..|..|||+.|+++ .+|..++.|+ |+.|-
T Consensus 74 ltdt~~aDlsrNR~-~elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli 149 (722)
T KOG0532|consen 74 LTDTVFADLSRNRF-SELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLI 149 (722)
T ss_pred ccchhhhhcccccc-ccCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEE
Confidence 44445678888888 568888888888999999999987 78889999999999999999988 7888888876 88899
Q ss_pred ccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccc-cCCcEEEeCCccccCCcC
Q 004195 191 LKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLH-KKMVTLVLRNNRFQFGLN 269 (769)
Q Consensus 191 L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~-~~L~~L~l~~N~~~~~i~ 269 (769)
+++|+++ .+|..++.+..|..||.+.|++...++.++.+.+|+.|++..|++....+.+. -.|..||++.|++. .|
T Consensus 150 ~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~slpsql~~l~slr~l~vrRn~l~~lp~El~~LpLi~lDfScNkis-~i- 226 (722)
T KOG0532|consen 150 VSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQSLPSQLGYLTSLRDLNVRRNHLEDLPEELCSLPLIRLDFSCNKIS-YL- 226 (722)
T ss_pred EecCccc-cCCcccccchhHHHhhhhhhhhhhchHHhhhHHHHHHHHHhhhhhhhCCHHHhCCceeeeecccCcee-ec-
Confidence 9999988 68888888889999999999998888889999999999998888865444433 24566777777766 34
Q ss_pred chhhcCCCcCcEEeccCccccc
Q 004195 270 PDELRSYNQLQKLDISLNRFVG 291 (769)
Q Consensus 270 p~~~~~l~~L~~L~Ls~N~l~~ 291 (769)
|-.|..+..|++|-|.+|.+..
T Consensus 227 Pv~fr~m~~Lq~l~LenNPLqS 248 (722)
T KOG0532|consen 227 PVDFRKMRHLQVLQLENNPLQS 248 (722)
T ss_pred chhhhhhhhheeeeeccCCCCC
Confidence 6677777777777777777665
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.8e-14 Score=151.11 Aligned_cols=182 Identities=27% Similarity=0.381 Sum_probs=131.3
Q ss_pred cCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCE
Q 004195 133 AHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRV 212 (769)
Q Consensus 133 ~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 212 (769)
-.|+.-...||+.|+++ .+|..++.+..|+.|.|+.|.+. .+|..+++|..|++|||+.|+++ .+|..+..|+ |+.
T Consensus 72 ~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkv 147 (722)
T KOG0532|consen 72 YDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKV 147 (722)
T ss_pred ccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-cee
Confidence 45666778999999998 89999999999999999999997 89999999999999999999999 6888888876 999
Q ss_pred EEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCcccccc
Q 004195 213 VSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGP 292 (769)
Q Consensus 213 L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~ 292 (769)
|-+++|+++..+++++.+..|..||.+.|.+... |..++.+.+|+.|.+..|++..
T Consensus 148 li~sNNkl~~lp~~ig~~~tl~~ld~s~nei~sl-----------------------psql~~l~slr~l~vrRn~l~~- 203 (722)
T KOG0532|consen 148 LIVSNNKLTSLPEEIGLLPTLAHLDVSKNEIQSL-----------------------PSQLGYLTSLRDLNVRRNHLED- 203 (722)
T ss_pred EEEecCccccCCcccccchhHHHhhhhhhhhhhc-----------------------hHHhhhHHHHHHHHHhhhhhhh-
Confidence 9999999998877888888888888888877533 4444445555555555555443
Q ss_pred CCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccc
Q 004195 293 FIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCL 345 (769)
Q Consensus 293 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~ 345 (769)
+|+.+..| .|..||++.|+++. +|-.|..|..|++|-|.+|.|. ++|..+
T Consensus 204 lp~El~~L-pLi~lDfScNkis~-iPv~fr~m~~Lq~l~LenNPLq-SPPAqI 253 (722)
T KOG0532|consen 204 LPEELCSL-PLIRLDFSCNKISY-LPVDFRKMRHLQVLQLENNPLQ-SPPAQI 253 (722)
T ss_pred CCHHHhCC-ceeeeecccCceee-cchhhhhhhhheeeeeccCCCC-CChHHH
Confidence 33334422 24455555555543 3444555555555555555554 334333
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=9.6e-13 Score=151.87 Aligned_cols=107 Identities=24% Similarity=0.354 Sum_probs=97.9
Q ss_pred CcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEcc
Q 004195 254 MVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLS 333 (769)
Q Consensus 254 L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~ 333 (769)
+..|+|++|.+.|.+ |..+..+++|+.|+|++|.+.|.+|+.++.+++|+.|+|++|+++|.+|..++.+++|+.|+|+
T Consensus 420 v~~L~L~~n~L~g~i-p~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 420 IDGLGLDNQGLRGFI-PNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEECCCCCccccC-CHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 678999999999988 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCCCCcccccc-CCCceEECCCCCC
Q 004195 334 SNLLTGYLPSCLQVE-AKTRLVLYSKNCL 361 (769)
Q Consensus 334 ~N~l~g~~p~~~~~~-~~l~~l~l~~N~l 361 (769)
+|+++|.+|..+... .++..+++.+|..
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~ 527 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAG 527 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCcc
Confidence 999999999988653 3456778888854
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.31 E-value=3.6e-12 Score=138.16 Aligned_cols=247 Identities=16% Similarity=0.172 Sum_probs=173.6
Q ss_pred CCCcCcccc--CCceeEEEEEe--C-CCcEEEEEEccccC--CCChhHHHHHHHHHhhcc-CCceeeEeeeeeccCCCCC
Q 004195 482 FDSSSFMCD--ASHGQIYKGKL--T-DGTLVAIRSLKMSK--KSSPHMYTYHIELISKLR-HSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 482 f~~~~~iG~--G~~g~Vy~~~~--~-~g~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~~ 553 (769)
|.....+|. |.+|.||.++. . ++..+|+|+-+... ......=.+|.....+++ |+|.|+.+..+.+.+
T Consensus 116 ~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~---- 191 (524)
T KOG0601|consen 116 FPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSG---- 191 (524)
T ss_pred cccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCC----
Confidence 556788999 99999999987 3 68899999844322 223334456777777775 999999777666544
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHH----HhcccccCCCCCccccCccccceeeCCC-ceeee
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVK----GVQFLHTGIVPGVFSNNLKITDVLLDEN-FHVKI 628 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~----gL~yLH~~~~~~ivHrDlKp~NILld~~-~~~kl 628 (769)
..++-+|+|. .+|..+.+.....++....+.+..+..+ ||.++|.. .++|-|+||.||+...+ ...++
T Consensus 192 ---~lfiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~ 264 (524)
T KOG0601|consen 192 ---ILFIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKL 264 (524)
T ss_pred ---cceeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeec
Confidence 3789999995 7899888865555777777778888888 99999998 99999999999999988 88999
Q ss_pred cCCCCchhhhccCCcce-------eecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcc
Q 004195 629 NSYNLPLLAEARGKGSA-------EVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNI 701 (769)
Q Consensus 629 ~DFGla~~~~~~~~~~~-------~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~ 701 (769)
+|||+...+........ .....|+.+|.. .+-++..+||||+|.+..|..++.......... .|.+.
T Consensus 265 ~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~-~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~---~W~~~-- 338 (524)
T KOG0601|consen 265 TDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELL-NGLATFASDIFSLGEVILEAILGSHLPSVGKNS---SWSQL-- 338 (524)
T ss_pred CCcceeEEccCCccccceeeeecCCCCceEeChhhh-ccccchHhhhcchhhhhHhhHhhcccccCCCCC---Ccccc--
Confidence 99999866554432111 122344556544 567899999999999999999987554322111 11110
Q ss_pred ccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 702 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
+... +..++......++...+..+++.+|..|++.+++..+...
T Consensus 339 ------r~~~---ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i 382 (524)
T KOG0601|consen 339 ------RQGY---IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVI 382 (524)
T ss_pred ------cccc---CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccc
Confidence 0001 1112222222334557889999999999999988776543
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.3e-12 Score=142.09 Aligned_cols=200 Identities=32% Similarity=0.393 Sum_probs=118.2
Q ss_pred EEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCC-cCCEEEcccCcCCccCCccCcCCcCCCEEeccCC
Q 004195 116 VLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLR-NLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNN 194 (769)
Q Consensus 116 ~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 194 (769)
.|++..|.+... +..+..++.++.|++.+|.++ .+|.....+. +|+.|++++|++. .+|..++.+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~~-~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRSN-ISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccccC-chhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 355555554222 223444455666666666655 4555555553 5666666666555 44445555555555555555
Q ss_pred CCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhc
Q 004195 195 SLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELR 274 (769)
Q Consensus 195 ~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~ 274 (769)
+++ .+|...+.+++|+.|++++|+++...+....+..| .+|.+++|... .+ +..+.
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~~l~~~~~~~~~L---------------------~~l~~~~N~~~-~~-~~~~~ 229 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKISDLPPEIELLSAL---------------------EELDLSNNSII-EL-LSSLS 229 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccccCchhhhhhhhh---------------------hhhhhcCCcce-ec-chhhh
Confidence 555 34444445555555555555555333323333334 44444444322 12 56677
Q ss_pred CCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccc
Q 004195 275 SYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCL 345 (769)
Q Consensus 275 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~ 345 (769)
.+.++..|.+++|++.. ++..++.+++++.|++++|+++.... ++.+.+++.|++++|.++..+|...
T Consensus 230 ~~~~l~~l~l~~n~~~~-~~~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~~~ 297 (394)
T COG4886 230 NLKNLSGLELSNNKLED-LPESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPLIA 297 (394)
T ss_pred hcccccccccCCceeee-ccchhccccccceecccccccccccc--ccccCccCEEeccCccccccchhhh
Confidence 77788888888887754 25667777888888888888876544 7777888888888888887666544
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.29 E-value=6.4e-12 Score=139.93 Aligned_cols=142 Identities=15% Similarity=0.139 Sum_probs=94.7
Q ss_pred hcCCCCcCccccCCceeEEEEEeCC-CcEEEEEEccccCCC--------------------------C--------h---
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLTD-GTLVAIRSLKMSKKS--------------------------S--------P--- 520 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~~-g~~vAvK~~~~~~~~--------------------------~--------~--- 520 (769)
-..|+. +.||+|++|.||+|++++ |+.||||+.++.-.. + .
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 345766 789999999999999987 999999999744100 0 0
Q ss_pred ---hHHHHHHHHHhhcc----CCceeeEeeeeeccCCCCCCcceEEEEEeccCCCchhhhh--cCCCC---CCCHHHHHH
Q 004195 521 ---HMYTYHIELISKLR----HSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFI--SGPGY---KLTWVQRIA 588 (769)
Q Consensus 521 ---~~~~~Ei~~l~~l~----H~nIv~l~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l--~~~~~---~l~~~~~~~ 588 (769)
-++.+|+..+.+++ +.+.+.+-.++.+.. ...+|||||++|+.+.++- ...+. .+.......
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~s------t~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~ 271 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYC------SETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEV 271 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccC------CCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHH
Confidence 12445555555543 444454444444321 1258999999999998753 22221 133333333
Q ss_pred HHHHHHHHhcccccCCCCCccccCccccceeeCCCc----eeeecCCCCchhh
Q 004195 589 AAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF----HVKINSYNLPLLA 637 (769)
Q Consensus 589 i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~----~~kl~DFGla~~~ 637 (769)
++.|+. .. |++|+|+||.||+++.++ .+++.|||+....
T Consensus 272 ~~~Qif-------~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l 314 (537)
T PRK04750 272 FFTQVF-------RD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSL 314 (537)
T ss_pred HHHHHH-------hC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEEC
Confidence 444443 35 999999999999999888 9999999997543
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.28 E-value=9.1e-12 Score=119.98 Aligned_cols=130 Identities=13% Similarity=-0.021 Sum_probs=95.5
Q ss_pred cCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCcee-eEeeeeeccCCCCCCcceEEEEEe
Q 004195 485 SSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLV-SALGHCLDFSLDDPSISIIYLIFE 563 (769)
Q Consensus 485 ~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv-~l~~~~~~~~~~~~~~~~~~lV~E 563 (769)
.+.++.|.++.||+++.. +..|++|....... ....+.+|+.+++.+.+.+++ +++++.. .. .++|||
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~-------~~lv~e 71 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDP--ET-------GVLITE 71 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeC--CC-------CeEEEE
Confidence 356889999999999875 77899998764422 234578899999998765554 4444322 11 379999
Q ss_pred ccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCC--CCCccccCccccceeeCCCceeeecCCCCch
Q 004195 564 YAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGI--VPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 564 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
|+++.++.+.- .....++.+++++|+.||+.. ...++|+|++|.||+++ ++.++++|||.+.
T Consensus 72 ~i~G~~l~~~~---------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 72 FIEGSELLTED---------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred ecCCCcccccc---------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 99998876430 112345678999999999872 22369999999999999 6689999999764
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.9e-12 Score=140.27 Aligned_cols=188 Identities=32% Similarity=0.403 Sum_probs=153.4
Q ss_pred cccCCCCCCcEEEeecccccCCCCccccCCC-cCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCc
Q 004195 106 STLGSLSSLKVLSLVSLGLWGPLPGSIAHSS-SLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQ 184 (769)
Q Consensus 106 ~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 184 (769)
..+..++.++.|++.+|.++ .+|.....+. +|+.|++++|.+. .+|..++.+++|+.|++++|+++ .+|...+.++
T Consensus 110 ~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~ 186 (394)
T COG4886 110 SELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLS 186 (394)
T ss_pred hhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhh
Confidence 34566688999999999995 5677788885 9999999999998 68888999999999999999998 7888777999
Q ss_pred CCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccc
Q 004195 185 VLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRF 264 (769)
Q Consensus 185 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~ 264 (769)
+|+.|++++|+++ .+|.....+..|++|.+++|++...+..+.++.++..+.+.+|++..
T Consensus 187 ~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~~~~~~~~~~~~l~~l~l~~n~~~~------------------- 246 (394)
T COG4886 187 NLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSIIELLSSLSNLKNLSGLELSNNKLED------------------- 246 (394)
T ss_pred hhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcceecchhhhhcccccccccCCceeee-------------------
Confidence 9999999999999 67777777788999999999766666667888888777777776531
Q ss_pred cCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCC
Q 004195 265 QFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMS 322 (769)
Q Consensus 265 ~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 322 (769)
+ +..+..++.+++|++++|.++.... ++.+.+++.|++++|.+....+....
T Consensus 247 ---~-~~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~~~~ 298 (394)
T COG4886 247 ---L-PESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPLIAL 298 (394)
T ss_pred ---c-cchhccccccceecccccccccccc--ccccCccCEEeccCccccccchhhhc
Confidence 1 4566777778888888888876333 77888888888888888876665543
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.22 E-value=1e-11 Score=134.62 Aligned_cols=258 Identities=16% Similarity=0.184 Sum_probs=175.5
Q ss_pred cCHHH-HHHHhcCCCCcCccccCCceeEEEEEeC--CCcEEEEEEccccCCCChh--HHHHHHHHHhhc-cCCceeeEee
Q 004195 470 FTLDE-LKEATDCFDSSSFMCDASHGQIYKGKLT--DGTLVAIRSLKMSKKSSPH--MYTYHIELISKL-RHSNLVSALG 543 (769)
Q Consensus 470 ~~~~e-l~~~t~~f~~~~~iG~G~~g~Vy~~~~~--~g~~vAvK~~~~~~~~~~~--~~~~Ei~~l~~l-~H~nIv~l~~ 543 (769)
|+-++ ....+.+|.....||.|.|+.||+...+ ++..+|+|.+......... .-..|+-+...+ .|.++++++.
T Consensus 254 ~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~ 333 (524)
T KOG0601|consen 254 FTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNS 333 (524)
T ss_pred ecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCC
Confidence 33344 4555678999999999999999998744 6889999988765333222 234466666655 4888888766
Q ss_pred eeeccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC
Q 004195 544 HCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN 623 (769)
Q Consensus 544 ~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~ 623 (769)
.+.... ..|+--|||.++++...+.- ...++...++++..+++.++.++|+. .++|+|+||+||++..+
T Consensus 334 ~W~~~r-------~~~ip~e~~~~~s~~l~~~~-~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~ 402 (524)
T KOG0601|consen 334 SWSQLR-------QGYIPLEFCEGGSSSLRSVT-SQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISND 402 (524)
T ss_pred Cccccc-------cccCchhhhcCcchhhhhHH-HHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccc
Confidence 554322 25789999999988766632 22567778899999999999999988 99999999999999775
Q ss_pred -ceeeecCCCCchhhhccCCcceeecCCCc--chhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhc
Q 004195 624 -FHVKINSYNLPLLAEARGKGSAEVSSPAK--KTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVN 700 (769)
Q Consensus 624 -~~~kl~DFGla~~~~~~~~~~~~~~~~~~--~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~ 700 (769)
+.-+++|||++.-..-.. .....+...+ ++.......+..++|+||||.-+.|.++|.+...... .+...
T Consensus 403 ~~~~~~~~~~~~t~~~~~~-~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~-----~~~~i- 475 (524)
T KOG0601|consen 403 GFFSKLGDFGCWTRLAFSS-GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV-----QSLTI- 475 (524)
T ss_pred hhhhhccccccccccceec-ccccccccccccchhhccccccccccccccccccccccccCcccCcccc-----cceee-
Confidence 888999999874321111 1111122222 3333444567889999999999999999986432211 11000
Q ss_pred cccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 701 IGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 701 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
... .-|.. +.. ..++..+...+..+++..||.+.+...+..+...
T Consensus 476 --~~~-----~~p~~----~~~-~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~~ 520 (524)
T KOG0601|consen 476 --RSG-----DTPNL----PGL-KLQLQVLLKVMINPDRKRRPSAVELSLHSEFYRD 520 (524)
T ss_pred --ecc-----cccCC----Cch-HHhhhhhhhhhcCCccccchhhhhhcccchhhhh
Confidence 000 00111 111 1346677778899999999999999888877543
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.8e-10 Score=111.61 Aligned_cols=136 Identities=9% Similarity=0.078 Sum_probs=96.8
Q ss_pred cCccccCCceeEEEEEeCC-------CcEEEEEEccccC------------C---------CC-hhHHH----HHHHHHh
Q 004195 485 SSFMCDASHGQIYKGKLTD-------GTLVAIRSLKMSK------------K---------SS-PHMYT----YHIELIS 531 (769)
Q Consensus 485 ~~~iG~G~~g~Vy~~~~~~-------g~~vAvK~~~~~~------------~---------~~-~~~~~----~Ei~~l~ 531 (769)
...||.|.-+.||.|.-.+ +..+|||+.+... . .. .+.+. +|.+.|.
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3578999999999998543 4799999875320 0 01 12233 7999999
Q ss_pred hccC--CceeeEeeeeeccCCCCCCcceEEEEEeccCCCchhh-hhcCCCCCCCHHHHHHHHHHHHHHhccc-ccCCCCC
Q 004195 532 KLRH--SNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRS-FISGPGYKLTWVQRIAAAIAIVKGVQFL-HTGIVPG 607 (769)
Q Consensus 532 ~l~H--~nIv~l~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~-~l~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~ 607 (769)
++.- -++.+.+++.. -++||||+.++.+.. .++.. .++..+...+..+++.++.++ |.. +
T Consensus 82 rl~~~Gv~vP~pi~~~~-----------~~lvME~Ig~~~~~~~~Lkd~--~~~~~~~~~i~~~i~~~l~~l~H~~---g 145 (197)
T cd05146 82 RMQKAGIPCPEVVVLKK-----------HVLVMSFIGDDQVPAPKLKDA--KLNDEEMKNAYYQVLSMMKQLYKEC---N 145 (197)
T ss_pred HHHHcCCCCCeEEEecC-----------CEEEEEEcCCCCccchhhhcc--ccCHHHHHHHHHHHHHHHHHHHHhC---C
Confidence 9853 45666665421 389999997654422 22221 344455667789999999999 777 9
Q ss_pred ccccCccccceeeCCCceeeecCCCCchhh
Q 004195 608 VFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 608 ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
+||+|+++.||+++ ++.+.++|||.+...
T Consensus 146 lVHGDLs~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 146 LVHADLSEYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred eecCCCCHHHEEEE-CCcEEEEECCCceeC
Confidence 99999999999997 467999999987443
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.12 E-value=4.3e-10 Score=113.39 Aligned_cols=145 Identities=19% Similarity=0.233 Sum_probs=111.3
Q ss_pred CccccCCceeEEEEEeCCCcEEEEEEccccCC-CChhHHHHHHHHHhhccCC--ceeeEeeeeeccCCCCCCcceEEEEE
Q 004195 486 SFMCDASHGQIYKGKLTDGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHS--NLVSALGHCLDFSLDDPSISIIYLIF 562 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~--nIv~l~~~~~~~~~~~~~~~~~~lV~ 562 (769)
+.|+.|..+.||+++..+|+.+++|....... .....+.+|+++++.+++. ++.+++.++..... .+..++||
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~----~~~~~~v~ 79 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSV----LGTPFYVM 79 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCc----cCCceEEE
Confidence 56899999999999987778999999865432 1345789999999999753 45667776654221 12358999
Q ss_pred eccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCC--------------------------------------
Q 004195 563 EYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGI-------------------------------------- 604 (769)
Q Consensus 563 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-------------------------------------- 604 (769)
||+++.++.+.+.. ..++..++..++.+++++|++||+..
T Consensus 80 e~i~G~~l~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (223)
T cd05154 80 ERVDGRVLRDRLLR--PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM 157 (223)
T ss_pred EEeCCEecCCCCCC--CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence 99999988876542 25778888889999999999998631
Q ss_pred ---------------CCCccccCccccceeeCC--CceeeecCCCCchh
Q 004195 605 ---------------VPGVFSNNLKITDVLLDE--NFHVKINSYNLPLL 636 (769)
Q Consensus 605 ---------------~~~ivHrDlKp~NILld~--~~~~kl~DFGla~~ 636 (769)
...++|+|++|.||+++. ++.+.|+||+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 235799999999999998 66789999987643
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=99.10 E-value=4e-11 Score=113.78 Aligned_cols=126 Identities=29% Similarity=0.395 Sum_probs=49.3
Q ss_pred cCCCCCCcEEEeecccccCCCCcccc-CCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccC-cCCcC
Q 004195 108 LGSLSSLKVLSLVSLGLWGPLPGSIA-HSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSEL-SLLQV 185 (769)
Q Consensus 108 ~~~l~~L~~L~L~~n~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~ 185 (769)
+.+..+++.|+|++|.++.. ..++ .+.+|+.||||+|.|+. ++ .+..|+.|++|+|++|+|+. ++..+ ..+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRISS-ISEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S--CHHHHHH-TT
T ss_pred cccccccccccccccccccc--cchhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCCc-cccchHHhCCc
Confidence 34556788899999988653 2455 57889999999999984 44 57788999999999999884 44444 46889
Q ss_pred CCEEeccCCCCcccCC-ccccCCCCCCEEEccCccccccCCC-----CCCCccCcEEecc
Q 004195 186 LSVLSLKNNSLSGFLP-VSLTGLQSLRVVSLSANHLSGEIPD-----LRNLKNLRVFDVQ 239 (769)
Q Consensus 186 L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~ls~N~l~~~~p~-----l~~l~~L~~l~l~ 239 (769)
|++|+|++|++...-- ..+..+++|+.|+|.+|.++.. +. +..+++|+.||-.
T Consensus 90 L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~-~~YR~~vi~~lP~Lk~LD~~ 148 (175)
T PF14580_consen 90 LQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEK-KNYRLFVIYKLPSLKVLDGQ 148 (175)
T ss_dssp --EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGS-TTHHHHHHHH-TT-SEETTE
T ss_pred CCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccch-hhHHHHHHHHcChhheeCCE
Confidence 9999999998864322 4667788899999999988754 33 5567777777653
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.07 E-value=3e-11 Score=118.65 Aligned_cols=231 Identities=19% Similarity=0.241 Sum_probs=123.1
Q ss_pred CeeEEEeCCCCCCCCCCCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccc
Q 004195 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQI 156 (769)
Q Consensus 77 ~v~~l~l~~~~~~~~~~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~ 156 (769)
++..|.+++.....- .+|.+...+|-.+.-+.+|+.+.+|.+.-. .+-+-...=+.|+++...+.-++ ..| .+
T Consensus 183 ~l~~l~vs~~~~p~~----~sni~~~~l~f~l~~f~~l~~~~~s~~~~~-~i~~~~~~kptl~t~~v~~s~~~-~~~-~l 255 (490)
T KOG1259|consen 183 QLVALVVTPVKDPID----RSNIIPNRLSFNLNAFRNLKTLKFSALSTE-NIVDIELLKPTLQTICVHNTTIQ-DVP-SL 255 (490)
T ss_pred heeEEEecCCCCCCc----cccccccccccchHHhhhhheeeeeccchh-heeceeecCchhheeeeeccccc-ccc-cc
Confidence 466666655432210 112333333444555677777777766432 12222222345677776665544 222 11
Q ss_pred cCCCcCCEEEccc-CcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcE
Q 004195 157 SSLRNLQTLILDD-NKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRV 235 (769)
Q Consensus 157 ~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~ 235 (769)
-.++.+.-+.-+. .-.+|..-.++..++.|+.|||++|.++ .+.+++.-++.++.|++|+|.+.. +..+..|.+|+.
T Consensus 256 ~pe~~~~D~~~~E~~t~~G~~~~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~-v~nLa~L~~L~~ 333 (490)
T KOG1259|consen 256 LPETILADPSGSEPSTSNGSALVSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRT-VQNLAELPQLQL 333 (490)
T ss_pred cchhhhcCccCCCCCccCCceEEecchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceee-ehhhhhcccceE
Confidence 1122221111111 1123444445566677788888888777 456666667778888888887763 344666777777
Q ss_pred EeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCc
Q 004195 236 FDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTG 315 (769)
Q Consensus 236 l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 315 (769)
|||++|.++. + -.+=..+.+.+.|.|+.|.+.. ...+..+-+|..||+++|++..
T Consensus 334 LDLS~N~Ls~----------------------~-~Gwh~KLGNIKtL~La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ 388 (490)
T KOG1259|consen 334 LDLSGNLLAE----------------------C-VGWHLKLGNIKTLKLAQNKIET--LSGLRKLYSLVNLDLSSNQIEE 388 (490)
T ss_pred eecccchhHh----------------------h-hhhHhhhcCEeeeehhhhhHhh--hhhhHhhhhheeccccccchhh
Confidence 7777766541 1 1222344455566666665532 2334455566666666666654
Q ss_pred cc-cccCCCCCCCcEEEccCCcCCCCC
Q 004195 316 LL-LQNMSCNPQLAFVDLSSNLLTGYL 341 (769)
Q Consensus 316 ~~-~~~~~~l~~L~~l~l~~N~l~g~~ 341 (769)
.. -..++++|-|+.+.|-+|.+.+.+
T Consensus 389 ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 389 LDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred HHHhcccccccHHHHHhhcCCCccccc
Confidence 32 245666677777777777666543
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.2e-10 Score=110.39 Aligned_cols=109 Identities=31% Similarity=0.424 Sum_probs=39.5
Q ss_pred cccCCCcCceeeccCcccCCcCCcccc-CCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccc-cCCC
Q 004195 131 SIAHSSSLEILNLSSNYLSGSIPVQIS-SLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSL-TGLQ 208 (769)
Q Consensus 131 ~~~~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l-~~l~ 208 (769)
.+.+..+++.|+|++|.|+ .+. .++ .+.+|+.|+|++|.|+. ++ .+..+++|+.|++++|+++. +++.+ ..++
T Consensus 14 ~~~n~~~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp 88 (175)
T PF14580_consen 14 QYNNPVKLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRISS-ISEGLDKNLP 88 (175)
T ss_dssp ------------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S--CHHHHHH-T
T ss_pred ccccccccccccccccccc-ccc-chhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCCc-cccchHHhCC
Confidence 3566778999999999998 343 566 58899999999999984 43 47889999999999999995 44445 4689
Q ss_pred CCCEEEccCcccccc--CCCCCCCccCcEEeccCCcCC
Q 004195 209 SLRVVSLSANHLSGE--IPDLRNLKNLRVFDVQDNYFG 244 (769)
Q Consensus 209 ~L~~L~ls~N~l~~~--~p~l~~l~~L~~l~l~~N~l~ 244 (769)
+|+.|+|++|++... +..+..+++|++|++.+|.+.
T Consensus 89 ~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 89 NLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp T--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred cCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 999999999999742 333666777777777777654
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.9e-09 Score=100.43 Aligned_cols=131 Identities=14% Similarity=0.213 Sum_probs=92.3
Q ss_pred CccccCCceeEEEEEeCCCcEEEEEEc-cccCCCC-------hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 486 SFMCDASHGQIYKGKLTDGTLVAIRSL-KMSKKSS-------PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~~g~~vAvK~~-~~~~~~~-------~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
..+++|+-+.+|.+.+. |..+++|.- .+..... .+...+|..++.+++--.|.-..=|..+.+ .
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~-------~ 73 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPD-------N 73 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCC-------C
Confidence 46889999999999765 334555543 2221111 245678999999886443332222223322 2
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..|+|||.+|..|.+.+... +..++..+-+-+.-||.. +|+|+|+.++||++..+. +.++|||++..
T Consensus 74 ~~I~me~I~G~~lkd~l~~~--------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 74 GLIVMEYIEGELLKDALEEA--------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred CEEEEEEeCChhHHHHHHhc--------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 57999999998999888754 245666777777889999 999999999999997655 99999999854
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.1e-09 Score=119.88 Aligned_cols=167 Identities=18% Similarity=0.239 Sum_probs=118.3
Q ss_pred EEE-eCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEEEeccCCCchhhhhcC
Q 004195 498 KGK-LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISG 576 (769)
Q Consensus 498 ~~~-~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~ 576 (769)
.|. ..++..|.|...+...........+-++-|+.+|||||+++++.+.... +.|||+|-+. .|..++.+
T Consensus 30 ~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~-------~~ylvTErV~--Pl~~~lk~ 100 (690)
T KOG1243|consen 30 DGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEG-------TLYLVTERVR--PLETVLKE 100 (690)
T ss_pred ccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccC-------ceEEEeeccc--cHHHHHHH
Confidence 344 3478889998887655433455778889999999999999999876533 4899999984 67777764
Q ss_pred CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhccCC--cceeecCCCcch
Q 004195 577 PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGK--GSAEVSSPAKKT 654 (769)
Q Consensus 577 ~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~--~~~~~~~~~~~p 654 (769)
. ......-.+.||+.||.|||+.| +++|++|.-+.|++++.|+.||++|-.....+.... ........+..|
T Consensus 101 l----~~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P 174 (690)
T KOG1243|consen 101 L----GKEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDP 174 (690)
T ss_pred h----HHHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccCh
Confidence 3 34455566789999999999765 899999999999999999999999977643322111 000000111112
Q ss_pred hhhccCCCCCCCCeeehhHHHHHHHhC
Q 004195 655 SVLARTEQDDKSDVYDIGIILIEIIVG 681 (769)
Q Consensus 655 e~~~~~~~~~ksDVwS~Gvil~elltG 681 (769)
+.+... +...|.|-||++++|++.|
T Consensus 175 ~~~~~s--~~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 175 EEIDPS--EWSIDSWGLGCLIEELFNG 199 (690)
T ss_pred hhcCcc--ccchhhhhHHHHHHHHhCc
Confidence 222111 1346999999999999999
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.95 E-value=2.9e-09 Score=98.57 Aligned_cols=142 Identities=14% Similarity=0.151 Sum_probs=97.9
Q ss_pred CcCccccCCceeEEEEEeCCCcEEEEEEcc-ccCCC-------ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 484 SSSFMCDASHGQIYKGKLTDGTLVAIRSLK-MSKKS-------SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 484 ~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~-~~~~~-------~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
....|-+|+-+.|+++.+. |+...||.-. +.... ..+...+|++++.+++--.|.-..=++.+...
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~----- 84 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYG----- 84 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCC-----
Confidence 5678999999999999985 6776676433 22111 13467789999998864333322223333222
Q ss_pred ceEEEEEeccCC-CchhhhhcCCCCCCCHHH-HHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc---eeeecC
Q 004195 556 SIIYLIFEYAPN-ETLRSFISGPGYKLTWVQ-RIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF---HVKINS 630 (769)
Q Consensus 556 ~~~~lV~Ey~~~-gsL~~~l~~~~~~l~~~~-~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~---~~kl~D 630 (769)
-.|+|||.++ -++.+++......-.... ....+..|-+.+.-||.. +|+|+||..+||++..++ .+.++|
T Consensus 85 --~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lId 159 (229)
T KOG3087|consen 85 --GQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILID 159 (229)
T ss_pred --CeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEe
Confidence 3799999986 377887763221222222 267788888899999999 999999999999996654 358999
Q ss_pred CCCchh
Q 004195 631 YNLPLL 636 (769)
Q Consensus 631 FGla~~ 636 (769)
||++..
T Consensus 160 fgls~~ 165 (229)
T KOG3087|consen 160 FGLSSV 165 (229)
T ss_pred ecchhc
Confidence 999754
|
|
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.94 E-value=8.1e-11 Score=130.13 Aligned_cols=129 Identities=36% Similarity=0.369 Sum_probs=74.5
Q ss_pred CCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEE
Q 004195 110 SLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVL 189 (769)
Q Consensus 110 ~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 189 (769)
.+..++.+++..|.+.. +-..+..+++|+.|++..|+|.+ +...+..+++|++|+|++|.|+...+ +..++.|+.|
T Consensus 70 ~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~-i~~~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L 145 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEK-IENLLSSLVNLQVLDLSFNKITKLEG--LSTLTLLKEL 145 (414)
T ss_pred HhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhh-cccchhhhhcchheeccccccccccc--hhhccchhhh
Confidence 45566666666666643 22345666667777777777663 33335666666777777776664332 4455556666
Q ss_pred eccCCCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCC
Q 004195 190 SLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFG 244 (769)
Q Consensus 190 ~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~ 244 (769)
++++|.++.. ..+..+++|+.+++++|.++..-+. +..+.+|+.+++.+|.+.
T Consensus 146 ~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~~~~~~~l~~l~l~~n~i~ 199 (414)
T KOG0531|consen 146 NLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDELSELISLEELDLGGNSIR 199 (414)
T ss_pred eeccCcchhc--cCCccchhhhcccCCcchhhhhhhhhhhhccchHHHhccCCchh
Confidence 6666666532 3444466666666666666543322 355555666666666543
|
|
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.4e-10 Score=119.93 Aligned_cols=208 Identities=22% Similarity=0.261 Sum_probs=128.0
Q ss_pred CCCCCCcEEEeecccccCCCC--ccccCCCcCceeeccCcccCCcCC--ccccCCCcCCEEEcccCcCCccCCcc-CcCC
Q 004195 109 GSLSSLKVLSLVSLGLWGPLP--GSIAHSSSLEILNLSSNYLSGSIP--VQISSLRNLQTLILDDNKFTGAVPSE-LSLL 183 (769)
Q Consensus 109 ~~l~~L~~L~L~~n~l~g~~p--~~~~~l~~L~~L~Ls~N~l~g~~p--~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l 183 (769)
.++.+|+...|.+.... ..+ .....|++++.||||.|-|+.-.| .-...|++|+.|+|+.|++.-..... -..+
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 45788888888877663 333 367788899999999998874332 23467889999999999886433322 2357
Q ss_pred cCCCEEeccCCCCccc-CCccccCCCCCCEEEccCcc-ccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCC
Q 004195 184 QVLSVLSLKNNSLSGF-LPVSLTGLQSLRVVSLSANH-LSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRN 261 (769)
Q Consensus 184 ~~L~~L~L~~N~l~~~-~p~~l~~l~~L~~L~ls~N~-l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~ 261 (769)
+.|+.|.|+.+.|+.. +-..+..+++|+.|+|+.|. +.-.--....+..|+.|||++|.+-..--
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~------------- 263 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQ------------- 263 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCccccccc-------------
Confidence 8889999999888742 22334567899999999885 22111224456678888888876631110
Q ss_pred ccccCCcCchhhcCCCcCcEEeccCccccccCCccC------CCCCCCCEEEccCCcCCcc-ccccCCCCCCCcEEEccC
Q 004195 262 NRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSL------LSLPSITYLDIHGNKLTGL-LLQNMSCNPQLAFVDLSS 334 (769)
Q Consensus 262 N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~------~~l~~L~~L~l~~N~l~~~-~~~~~~~l~~L~~l~l~~ 334 (769)
-...+.++.|..|+++.+.+...-.+.. ..+++|++|+++.|++... -...+..+++|+.|.+..
T Consensus 264 --------~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~ 335 (505)
T KOG3207|consen 264 --------GYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITL 335 (505)
T ss_pred --------ccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccc
Confidence 0123444555555555555443322222 3456677777777766431 122333456666666666
Q ss_pred CcCC
Q 004195 335 NLLT 338 (769)
Q Consensus 335 N~l~ 338 (769)
|.|+
T Consensus 336 n~ln 339 (505)
T KOG3207|consen 336 NYLN 339 (505)
T ss_pred cccc
Confidence 6665
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.3e-10 Score=114.11 Aligned_cols=137 Identities=25% Similarity=0.264 Sum_probs=72.0
Q ss_pred CCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCcccc
Q 004195 126 GPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLT 205 (769)
Q Consensus 126 g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 205 (769)
|..-..+.....|+.||||+|.|+ .+.++..-++.++.|+||+|.+. .+. .+..|++|+.|||++|.++ .+-.+-.
T Consensus 274 G~~~~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~-nLa~L~~L~~LDLS~N~Ls-~~~Gwh~ 349 (490)
T KOG1259|consen 274 GSALVSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQ-NLAELPQLQLLDLSGNLLA-ECVGWHL 349 (490)
T ss_pred CceEEecchHhhhhhccccccchh-hhhhhhhhccceeEEecccccee-eeh-hhhhcccceEeecccchhH-hhhhhHh
Confidence 333333444455666666666665 45555555566666666666654 222 2555666666666666655 2333444
Q ss_pred CCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCC--Cc--ccccCCcEEEeCCccccCC
Q 004195 206 GLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPR--FP--RLHKKMVTLVLRNNRFQFG 267 (769)
Q Consensus 206 ~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~--~p--~~~~~L~~L~l~~N~~~~~ 267 (769)
+|-+.+.|.|++|.+. .+..+++|-+|..||+++|++... .. ..++.|+.+.|.+|.+.+.
T Consensus 350 KLGNIKtL~La~N~iE-~LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~ 414 (490)
T KOG1259|consen 350 KLGNIKTLKLAQNKIE-TLSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGS 414 (490)
T ss_pred hhcCEeeeehhhhhHh-hhhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcccc
Confidence 5555666666666554 233455556666666666655311 00 1123345556666666543
|
|
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.90 E-value=2.8e-10 Score=125.82 Aligned_cols=198 Identities=29% Similarity=0.322 Sum_probs=136.2
Q ss_pred cccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcC
Q 004195 106 STLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQV 185 (769)
Q Consensus 106 ~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 185 (769)
+.+..+++|..|++.+|++.+.. ..+..+++|++|+|++|+|+... .+..|+.|+.|++++|.|+. ...+..+++
T Consensus 89 ~~l~~~~~l~~l~l~~n~i~~i~-~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~l~~N~i~~--~~~~~~l~~ 163 (414)
T KOG0531|consen 89 NHLSKLKSLEALDLYDNKIEKIE-NLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELNLSGNLISD--ISGLESLKS 163 (414)
T ss_pred cccccccceeeeeccccchhhcc-cchhhhhcchheecccccccccc--chhhccchhhheeccCcchh--ccCCccchh
Confidence 34788999999999999997643 33788999999999999998543 46778889999999999973 244666999
Q ss_pred CCEEeccCCCCcccCC-ccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCccc-cc--CCcEEEeCC
Q 004195 186 LSVLSLKNNSLSGFLP-VSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRL-HK--KMVTLVLRN 261 (769)
Q Consensus 186 L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~-~~--~L~~L~l~~ 261 (769)
|+.+++++|.++..-+ . ...+.+|+.+++.+|.+. .+..+..+..+..+++..|.++..-+.. .. .|+.+++++
T Consensus 164 L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~-~i~~~~~~~~l~~~~l~~n~i~~~~~l~~~~~~~L~~l~l~~ 241 (414)
T KOG0531|consen 164 LKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIR-EIEGLDLLKKLVLLSLLDNKISKLEGLNELVMLHLRELYLSG 241 (414)
T ss_pred hhcccCCcchhhhhhhhh-hhhccchHHHhccCCchh-cccchHHHHHHHHhhcccccceeccCcccchhHHHHHHhccc
Confidence 9999999999986544 2 578899999999999986 3444555556666677888775332211 11 255666666
Q ss_pred ccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCC
Q 004195 262 NRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLT 314 (769)
Q Consensus 262 N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 314 (769)
|++... +..+..+..+..|++++|++... ..+...+.+..+.+..|.+.
T Consensus 242 n~i~~~--~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~ 290 (414)
T KOG0531|consen 242 NRISRS--PEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLA 290 (414)
T ss_pred Cccccc--cccccccccccccchhhcccccc--ccccccchHHHhccCcchhc
Confidence 666521 24455556666666666665441 22233344444555555443
|
|
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.89 E-value=2.2e-10 Score=118.58 Aligned_cols=207 Identities=21% Similarity=0.258 Sum_probs=122.3
Q ss_pred cCCCcCceeeccCcccCCcCC--ccccCCCcCCEEEcccCcCCccCC--ccCcCCcCCCEEeccCCCCcccCCccc-cCC
Q 004195 133 AHSSSLEILNLSSNYLSGSIP--VQISSLRNLQTLILDDNKFTGAVP--SELSLLQVLSVLSLKNNSLSGFLPVSL-TGL 207 (769)
Q Consensus 133 ~~l~~L~~L~Ls~N~l~g~~p--~~~~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~p~~l-~~l 207 (769)
+++.+|+...|.+..+. ..+ .....|++++.||||+|-|..-.| .-...|++|+.|+|+.|.+.-...... ..+
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 46777777777777665 233 245567777777777776653221 223456667777777766653222111 134
Q ss_pred CCCCEEEccCcccccc-CC-CCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEecc
Q 004195 208 QSLRVVSLSANHLSGE-IP-DLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDIS 285 (769)
Q Consensus 208 ~~L~~L~ls~N~l~~~-~p-~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls 285 (769)
+.|+.|.|+.|.|+.- +. -+..+ +.|..|+|..|...+ +.......+..|+.|||+
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~f---------------------Psl~~L~L~~N~~~~-~~~~~~~i~~~L~~LdLs 254 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTF---------------------PSLEVLYLEANEIIL-IKATSTKILQTLQELDLS 254 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhC---------------------CcHHHhhhhcccccc-eecchhhhhhHHhhcccc
Confidence 5555555555555421 00 02233 444455555553211 113445567789999999
Q ss_pred CccccccC-CccCCCCCCCCEEEccCCcCCcccccc------CCCCCCCcEEEccCCcCCCCCCc--cccccCCCceEEC
Q 004195 286 LNRFVGPF-IPSLLSLPSITYLDIHGNKLTGLLLQN------MSCNPQLAFVDLSSNLLTGYLPS--CLQVEAKTRLVLY 356 (769)
Q Consensus 286 ~N~l~~~~-~~~~~~l~~L~~L~l~~N~l~~~~~~~------~~~l~~L~~l~l~~N~l~g~~p~--~~~~~~~l~~l~l 356 (769)
+|++-... -...+.++.|+.|+++.+.++..--.. ....++|++|+++.|++. ..++ .+..+.++..+..
T Consensus 255 ~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~-~w~sl~~l~~l~nlk~l~~ 333 (505)
T KOG3207|consen 255 NNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIR-DWRSLNHLRTLENLKHLRI 333 (505)
T ss_pred CCcccccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccc-cccccchhhccchhhhhhc
Confidence 99876432 245788999999999999887753322 356799999999999985 1121 1223345555666
Q ss_pred CCCCCCh
Q 004195 357 SKNCLSN 363 (769)
Q Consensus 357 ~~N~l~~ 363 (769)
..|.++.
T Consensus 334 ~~n~ln~ 340 (505)
T KOG3207|consen 334 TLNYLNK 340 (505)
T ss_pred ccccccc
Confidence 6676654
|
|
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.87 E-value=3.2e-08 Score=105.17 Aligned_cols=169 Identities=19% Similarity=0.330 Sum_probs=128.1
Q ss_pred eeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEEEeccCC-Cchh
Q 004195 494 GQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPN-ETLR 571 (769)
Q Consensus 494 g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV~Ey~~~-gsL~ 571 (769)
.+.||+... ||..|+.|+++..+.........-++.++++.|+|+|++.+++.....++ ..+++||+|+|+ ++|.
T Consensus 290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D---~SlvlvYDYyP~s~TL~ 366 (655)
T KOG3741|consen 290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGD---LSLVLVYDYYPSSPTLY 366 (655)
T ss_pred ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCc---ceEEEEEecCCCCchHH
Confidence 578999965 89999999996554444434455688899999999999999987544432 248999999986 5676
Q ss_pred hhhc--------------CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 572 SFIS--------------GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 572 ~~l~--------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
++-. ..+...++...+.++.|+..||.++|+. |..-+-|.|.+|+++.+.+++|+..|+....
T Consensus 367 d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl 443 (655)
T KOG3741|consen 367 DLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVL 443 (655)
T ss_pred HHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeee
Confidence 6543 1233567889999999999999999998 9988999999999999999999988876544
Q ss_pred hccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCC
Q 004195 638 EARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRP 683 (769)
Q Consensus 638 ~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~ 683 (769)
..... .|- +.-.+-|.=.||.+++-|.||..
T Consensus 444 ~~d~~----------~~l-----e~~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 444 QEDPT----------EPL-----ESQQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred cCCCC----------cch-----hHHhhhhHHHHHHHHHHHhhccc
Confidence 32220 010 11235677789999999999963
|
|
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.7e-09 Score=127.56 Aligned_cols=86 Identities=33% Similarity=0.392 Sum_probs=53.5
Q ss_pred cCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCC
Q 004195 108 LGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLS 187 (769)
Q Consensus 108 ~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 187 (769)
|..++.|++|||++|.=-+.+|..+++|-+||||||+...++ .+|..+++|+.|.+||+..+.....+|.....|++|+
T Consensus 567 f~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr 645 (889)
T KOG4658|consen 567 FRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLR 645 (889)
T ss_pred HhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhccccc
Confidence 555666666666665555566666666666666666666666 5666666666666666666654444555555566666
Q ss_pred EEeccCC
Q 004195 188 VLSLKNN 194 (769)
Q Consensus 188 ~L~L~~N 194 (769)
+|.|..-
T Consensus 646 ~L~l~~s 652 (889)
T KOG4658|consen 646 VLRLPRS 652 (889)
T ss_pred EEEeecc
Confidence 6666543
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.86 E-value=7.9e-10 Score=126.01 Aligned_cols=254 Identities=16% Similarity=0.182 Sum_probs=165.6
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
.++|.+.+-+-+|.++.++-++-. .|...++|...... ..+.+...++-.++-..+||-+++...-+ +.
T Consensus 803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~-------~~ 875 (1205)
T KOG0606|consen 803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSF-------PC 875 (1205)
T ss_pred CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCC-------CC
Confidence 455667778889999999988743 45455555544321 22223333444444444567666544331 11
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
....+||++|..+++|...++..+ ..+..........+..+++|||.. .++|||+||.|++...++..+++|||..
T Consensus 876 rsP~~L~~~~~~~~~~~Skl~~~~-~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~ 951 (1205)
T KOG0606|consen 876 RSPLPLVGHYLNGGDLPSKLHNSG-CLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTL 951 (1205)
T ss_pred CCCcchhhHHhccCCchhhhhcCC-CcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCccccc
Confidence 233799999999999999998655 334333334455678899999997 7999999999999999999999999843
Q ss_pred hhhh-------c---c-----------------------CCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhC
Q 004195 635 LLAE-------A---R-----------------------GKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVG 681 (769)
Q Consensus 635 ~~~~-------~---~-----------------------~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG 681 (769)
.... . . .......+..|.+||...+..-...+|.|++|++++|.++|
T Consensus 952 ~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g 1031 (1205)
T KOG0606|consen 952 SKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTG 1031 (1205)
T ss_pred cccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcC
Confidence 2110 0 0 00111223345567777777788899999999999999999
Q ss_pred CCCCCCchhHHH-HhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHH---HHHHHhHhhh
Q 004195 682 RPITSENVVVLV-KDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVE---DTLWNLQFAT 756 (769)
Q Consensus 682 ~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~---evl~~l~~~~ 756 (769)
.+||.....+.+ ..+.. ....| ...+.+...++.+++.+.+..+|.+|-.|. ++-.|..|..
T Consensus 1032 ~pp~na~tpq~~f~ni~~----~~~~~---------p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~ 1097 (1205)
T KOG0606|consen 1032 IPPFNAETPQQIFENILN----RDIPW---------PEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQD 1097 (1205)
T ss_pred CCCCCCcchhhhhhcccc----CCCCC---------CCCccccChhhhhhhhhhhccCchhccCcccccccccCCccCC
Confidence 999976554322 11111 11111 112223334478888899999999998877 6666766643
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.82 E-value=2.7e-09 Score=83.25 Aligned_cols=57 Identities=44% Similarity=0.520 Sum_probs=23.3
Q ss_pred CceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCC
Q 004195 138 LEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNN 194 (769)
Q Consensus 138 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 194 (769)
|++|++++|+|+...+..|.++++|++|++++|+++...|..|.++++|++|++++|
T Consensus 3 L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N 59 (61)
T PF13855_consen 3 LESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNN 59 (61)
T ss_dssp ESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSS
T ss_pred CcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCC
Confidence 344444444444333333444444444444444444333334444444444444444
|
... |
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.80 E-value=2.4e-08 Score=96.43 Aligned_cols=124 Identities=16% Similarity=0.220 Sum_probs=81.4
Q ss_pred eEEEEEeCCCcEEEEEEccccC--------------C--------CC----hhHHHHHHHHHhhccCC--ceeeEeeeee
Q 004195 495 QIYKGKLTDGTLVAIRSLKMSK--------------K--------SS----PHMYTYHIELISKLRHS--NLVSALGHCL 546 (769)
Q Consensus 495 ~Vy~~~~~~g~~vAvK~~~~~~--------------~--------~~----~~~~~~Ei~~l~~l~H~--nIv~l~~~~~ 546 (769)
.||.|...+|..+|||..+... . .. .....+|.+.|.++..- ++.+.+++-.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~~ 80 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYNR 80 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEET
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEeC
Confidence 4999999899999999875320 0 00 12456899999999755 4566665532
Q ss_pred ccCCCCCCcceEEEEEeccC--CCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcc-cccCCCCCccccCccccceeeCCC
Q 004195 547 DFSLDDPSISIIYLIFEYAP--NETLRSFISGPGYKLTWVQRIAAAIAIVKGVQF-LHTGIVPGVFSNNLKITDVLLDEN 623 (769)
Q Consensus 547 ~~~~~~~~~~~~~lV~Ey~~--~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~y-LH~~~~~~ivHrDlKp~NILld~~ 623 (769)
-.|||||++ |..+..+.... ++......++.+++..+.. +|.. +|+|+|+.+.||+++++
T Consensus 81 -----------~~ivME~I~~~G~~~~~l~~~~---~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~ 143 (188)
T PF01163_consen 81 -----------NVIVMEYIGEDGVPLPRLKDVD---LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG 143 (188)
T ss_dssp -----------TEEEEE--EETTEEGGCHHHCG---GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT
T ss_pred -----------CEEEEEecCCCccchhhHHhcc---ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc
Confidence 279999998 65555544321 1133455667777776655 4677 99999999999999887
Q ss_pred ceeeecCCCCchh
Q 004195 624 FHVKINSYNLPLL 636 (769)
Q Consensus 624 ~~~kl~DFGla~~ 636 (769)
.+.++|||.+..
T Consensus 144 -~~~iIDf~qav~ 155 (188)
T PF01163_consen 144 -KVYIIDFGQAVD 155 (188)
T ss_dssp -CEEE--GTTEEE
T ss_pred -eEEEEecCccee
Confidence 999999998743
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.80 E-value=3.5e-09 Score=82.60 Aligned_cols=61 Identities=39% Similarity=0.554 Sum_probs=54.0
Q ss_pred CcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccc
Q 004195 160 RNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHL 220 (769)
Q Consensus 160 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l 220 (769)
++|++|+|++|+++...+..|.++++|++|++++|.++...|..|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4788999999999977778899999999999999999988888999999999999999875
|
... |
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.79 E-value=5.2e-10 Score=112.92 Aligned_cols=91 Identities=22% Similarity=0.304 Sum_probs=50.3
Q ss_pred hhcCCCcCcEEeccCcccccc----CCccCCCCCCCCEEEccCCcCCcccc----ccC-CCCCCCcEEEccCCcCCC---
Q 004195 272 ELRSYNQLQKLDISLNRFVGP----FIPSLLSLPSITYLDIHGNKLTGLLL----QNM-SCNPQLAFVDLSSNLLTG--- 339 (769)
Q Consensus 272 ~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~~~----~~~-~~l~~L~~l~l~~N~l~g--- 339 (769)
.+..+++|+.|||.+|.|+.. +...+..+++|+.|+++.+.+...=. ..+ ...|+|+.+.+.+|.++.
T Consensus 208 al~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~ 287 (382)
T KOG1909|consen 208 ALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAA 287 (382)
T ss_pred HHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHH
Confidence 456666666666666666532 12234455666677766666543211 111 124667777777777652
Q ss_pred -CCCccccccCCCceEECCCCCCC
Q 004195 340 -YLPSCLQVEAKTRLVLYSKNCLS 362 (769)
Q Consensus 340 -~~p~~~~~~~~l~~l~l~~N~l~ 362 (769)
.+-.+....+.+..|++++|.+.
T Consensus 288 ~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 288 LALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred HHHHHHHhcchhhHHhcCCccccc
Confidence 12223334556677777777773
|
|
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.2e-07 Score=97.39 Aligned_cols=144 Identities=10% Similarity=0.071 Sum_probs=99.3
Q ss_pred CccccCCceeEEEEEeCCCcEEEEEEccccCC-----------CChhHHHHHHHHHhhccCCce--eeEeeeeeccCCCC
Q 004195 486 SFMCDASHGQIYKGKLTDGTLVAIRSLKMSKK-----------SSPHMYTYHIELISKLRHSNL--VSALGHCLDFSLDD 552 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~-----------~~~~~~~~Ei~~l~~l~H~nI--v~l~~~~~~~~~~~ 552 (769)
+.+-......|+++.+ +|+.|.||+...... .....+.+|...+.++...+| .+.+++..... +
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~--~ 104 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGS--N 104 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecC--C
Confidence 3344344455777766 577899997743221 111247899998888853333 34455553211 1
Q ss_pred CCcceEEEEEeccCCC-chhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC-------C
Q 004195 553 PSISIIYLIFEYAPNE-TLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE-------N 623 (769)
Q Consensus 553 ~~~~~~~lV~Ey~~~g-sL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~-------~ 623 (769)
+.....++|+|++++. +|.+++... ....+...+..++.++++.+.-||.. ||+|+|++++|||++. +
T Consensus 105 ~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~ 181 (268)
T PRK15123 105 PATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREED 181 (268)
T ss_pred CccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCC
Confidence 1123468999999875 798887521 22455667788999999999999999 9999999999999975 4
Q ss_pred ceeeecCCCCch
Q 004195 624 FHVKINSYNLPL 635 (769)
Q Consensus 624 ~~~kl~DFGla~ 635 (769)
+.+.++||+.+.
T Consensus 182 ~~~~LIDl~r~~ 193 (268)
T PRK15123 182 LKLSVIDLHRAQ 193 (268)
T ss_pred ceEEEEECCccc
Confidence 689999999764
|
|
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.2e-08 Score=120.69 Aligned_cols=177 Identities=26% Similarity=0.269 Sum_probs=123.2
Q ss_pred CCCCcEEEeeccc--ccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCE
Q 004195 111 LSSLKVLSLVSLG--LWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSV 188 (769)
Q Consensus 111 l~~L~~L~L~~n~--l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 188 (769)
.+.|+.|-+.+|. +.-..++.|..++.|++||||+|.=-+.+|..+++|-+|++|+|++..++ .+|..+++|.+|.+
T Consensus 544 ~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~ 622 (889)
T KOG4658|consen 544 NPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIY 622 (889)
T ss_pred CCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhhe
Confidence 4478999999886 43333456888999999999999877799999999999999999999998 89999999999999
Q ss_pred EeccCCCCcccCCccccCCCCCCEEEccCcccccc---CCCCCCCccCcEEeccCCcCCC-----CCcccccCCcEEEeC
Q 004195 189 LSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGE---IPDLRNLKNLRVFDVQDNYFGP-----RFPRLHKKMVTLVLR 260 (769)
Q Consensus 189 L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~---~p~l~~l~~L~~l~l~~N~l~~-----~~p~~~~~L~~L~l~ 260 (769)
|++..+.-...+|..+..|++|++|.+..-..... +.++.+|.+|+.+......... ..+.+....+.+.+.
T Consensus 623 Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~~~~e~l~~~~~L~~~~~~l~~~ 702 (889)
T KOG4658|consen 623 LNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSVLLLEDLLGMTRLRSLLQSLSIE 702 (889)
T ss_pred eccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchhHhHhhhhhhHHHHHHhHhhhhc
Confidence 99999887667777788899999999866543221 2234556666665553332200 000111111222322
Q ss_pred CccccCCcCchhhcCCCcCcEEeccCcccc
Q 004195 261 NNRFQFGLNPDELRSYNQLQKLDISLNRFV 290 (769)
Q Consensus 261 ~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~ 290 (769)
.+... . .+..+..+.+|+.|.+.+..+.
T Consensus 703 ~~~~~-~-~~~~~~~l~~L~~L~i~~~~~~ 730 (889)
T KOG4658|consen 703 GCSKR-T-LISSLGSLGNLEELSILDCGIS 730 (889)
T ss_pred ccccc-e-eecccccccCcceEEEEcCCCc
Confidence 22222 1 1456677777888877776664
|
|
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.66 E-value=2.4e-09 Score=108.23 Aligned_cols=232 Identities=25% Similarity=0.256 Sum_probs=149.0
Q ss_pred cccCCCCCCcEEEeecccccC----CCCccccCCCcCceeeccCcccCCc----CCc-------cccCCCcCCEEEcccC
Q 004195 106 STLGSLSSLKVLSLVSLGLWG----PLPGSIAHSSSLEILNLSSNYLSGS----IPV-------QISSLRNLQTLILDDN 170 (769)
Q Consensus 106 ~~~~~l~~L~~L~L~~n~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~----~p~-------~~~~l~~L~~L~L~~N 170 (769)
+.+..+..++.|+||+|.|.. .+-..+.+.++|+.-++|.- ++|. +|+ .+-.++.|++||||+|
T Consensus 24 ~~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~-ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDN 102 (382)
T KOG1909|consen 24 EELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDM-FTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDN 102 (382)
T ss_pred HHhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhh-hcCCcHHHHHHHHHHHHHHHhcCCceeEeecccc
Confidence 345667888999999998843 24556778888888888753 3333 343 3445678899999999
Q ss_pred cCCccCCcc----CcCCcCCCEEeccCCCCcccCCc-------------cccCCCCCCEEEccCccccccCCC-----CC
Q 004195 171 KFTGAVPSE----LSLLQVLSVLSLKNNSLSGFLPV-------------SLTGLQSLRVVSLSANHLSGEIPD-----LR 228 (769)
Q Consensus 171 ~l~~~~p~~----~~~l~~L~~L~L~~N~l~~~~p~-------------~l~~l~~L~~L~ls~N~l~~~~p~-----l~ 228 (769)
-|.-.-+.. +..++.|++|.|.+|-+.-.--. -.++-+.|+++....|++-..... +.
T Consensus 103 A~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~ 182 (382)
T KOG1909|consen 103 AFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQ 182 (382)
T ss_pred ccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHH
Confidence 886444443 45678888888888876521111 223446788888888877533221 45
Q ss_pred CCccCcEEeccCCcCCCCCcc-------cccCCcEEEeCCccccCC---cCchhhcCCCcCcEEeccCccccccCCccC-
Q 004195 229 NLKNLRVFDVQDNYFGPRFPR-------LHKKMVTLVLRNNRFQFG---LNPDELRSYNQLQKLDISLNRFVGPFIPSL- 297 (769)
Q Consensus 229 ~l~~L~~l~l~~N~l~~~~p~-------~~~~L~~L~l~~N~~~~~---i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~- 297 (769)
..+.|+.+.++.|.+...--. ..+.|+.|||..|.|+.. .....+..+++|++|+++++.+...-...|
T Consensus 183 ~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~ 262 (382)
T KOG1909|consen 183 SHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFV 262 (382)
T ss_pred hccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHH
Confidence 567788888888876532111 146777888888877631 113456667778888888877754322211
Q ss_pred ----CCCCCCCEEEccCCcCCcc----ccccCCCCCCCcEEEccCCcCC
Q 004195 298 ----LSLPSITYLDIHGNKLTGL----LLQNMSCNPQLAFVDLSSNLLT 338 (769)
Q Consensus 298 ----~~l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~l~l~~N~l~ 338 (769)
...|+|+.|.|.+|.++-. +-..+...|.|..|+|++|.+.
T Consensus 263 ~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 263 DALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred HHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 2357788888888877642 2223445677888888888773
|
|
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.53 E-value=2.4e-07 Score=91.76 Aligned_cols=131 Identities=12% Similarity=0.135 Sum_probs=90.6
Q ss_pred CCcCccccCCceeEEEEEeCCCcEEEEEEccccC-----------------CC-----ChhHHHHHHHHHhhccCC--ce
Q 004195 483 DSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSK-----------------KS-----SPHMYTYHIELISKLRHS--NL 538 (769)
Q Consensus 483 ~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~-----------------~~-----~~~~~~~Ei~~l~~l~H~--nI 538 (769)
.....||-|.-+.||.|..+.|..+|||.=+... .. .....++|.++|.++.-. .+
T Consensus 94 ~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~V 173 (304)
T COG0478 94 AIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKV 173 (304)
T ss_pred hhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCC
Confidence 3468999999999999999999999999543210 00 123467899999998644 66
Q ss_pred eeEeeeeeccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccce
Q 004195 539 VSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDV 618 (769)
Q Consensus 539 v~l~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NI 618 (769)
.+.+++-. -.+||||.+|-.|...-- +-.....|+..|++-+.-.-.. ||||+|+.+=||
T Consensus 174 P~P~~~nR-----------HaVvMe~ieG~eL~~~r~------~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNI 233 (304)
T COG0478 174 PKPIAWNR-----------HAVVMEYIEGVELYRLRL------DVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNI 233 (304)
T ss_pred CCcccccc-----------ceeeeehcccceeecccC------cccCHHHHHHHHHHHHHHHHHc---CccccCCchheE
Confidence 66665422 379999999866654321 1122222333333333222244 999999999999
Q ss_pred eeCCCceeeecCCCC
Q 004195 619 LLDENFHVKINSYNL 633 (769)
Q Consensus 619 Lld~~~~~kl~DFGl 633 (769)
+++++|.+.++||--
T Consensus 234 lV~~dg~~~vIDwPQ 248 (304)
T COG0478 234 LVTEDGDIVVIDWPQ 248 (304)
T ss_pred EEecCCCEEEEeCcc
Confidence 999999999999954
|
|
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.41 E-value=8.4e-07 Score=88.08 Aligned_cols=110 Identities=17% Similarity=0.153 Sum_probs=84.0
Q ss_pred hhHHHHHHHHHhhccCC--ceeeEeeeeeccCCCCCCcceEEEEEeccCCC-chhhhhcCCCCCCCHHHHHHHHHHHHHH
Q 004195 520 PHMYTYHIELISKLRHS--NLVSALGHCLDFSLDDPSISIIYLIFEYAPNE-TLRSFISGPGYKLTWVQRIAAAIAIVKG 596 (769)
Q Consensus 520 ~~~~~~Ei~~l~~l~H~--nIv~l~~~~~~~~~~~~~~~~~~lV~Ey~~~g-sL~~~l~~~~~~l~~~~~~~i~~~ia~g 596 (769)
...+.+|...+.+++.. .+.+.+++...... . ....++|+|++++. +|.+++.... ..+...+..++.++++.
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~--~-~~~s~lite~l~~~~~L~~~~~~~~-~~~~~~~~~ll~~l~~~ 130 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKG--G-GYRSYLITEALPGAQDLRDLLQQWE-QLDPSQRRELLRALARL 130 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCC--C-ceeEEEEEEeCCCcccHHHHHHhhc-ccchhhHHHHHHHHHHH
Confidence 45678888888877533 34566666554221 1 13468999999874 7999987533 25666788899999999
Q ss_pred hcccccCCCCCccccCccccceeeCCCc---eeeecCCCCchh
Q 004195 597 VQFLHTGIVPGVFSNNLKITDVLLDENF---HVKINSYNLPLL 636 (769)
Q Consensus 597 L~yLH~~~~~~ivHrDlKp~NILld~~~---~~kl~DFGla~~ 636 (769)
++-||+. ||+|+|+++.|||++.+. .+.++||+-++.
T Consensus 131 i~~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 131 IAKLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 9999999 999999999999998876 899999986643
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
| >KOG2137 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.5e-07 Score=103.97 Aligned_cols=152 Identities=18% Similarity=0.243 Sum_probs=100.0
Q ss_pred HHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhccCC-cceee----------cCCCcchhhhcc
Q 004195 591 IAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGK-GSAEV----------SSPAKKTSVLAR 659 (769)
Q Consensus 591 ~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~-~~~~~----------~~~~~~pe~~~~ 659 (769)
.+++.|+.|+|.. +++||++|.|++|.++..+..|++.|+.+........ ....+ ..-+.+||+...
T Consensus 106 ~~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 3455899999986 5899999999999999999999999998744332111 00001 112345777777
Q ss_pred CCCCCCCCeeehhHHHHHHH-hCCCCCCCchhHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCC
Q 004195 660 TEQDDKSDVYDIGIILIEII-VGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNE 738 (769)
Q Consensus 660 ~~~~~ksDVwS~Gvil~ell-tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~d 738 (769)
...+.++|+||+||++|-+. +|++-+............+.. .+... ..++...+.++.+-+.+.+..+
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~----------~~~~~-~~~s~~~p~el~~~l~k~l~~~ 252 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNL----------LNAGA-FGYSNNLPSELRESLKKLLNGD 252 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcc----------ccccc-ccccccCcHHHHHHHHHHhcCC
Confidence 77789999999999999999 555544332211111111000 00000 1122233344778888999999
Q ss_pred CCCCCCHHHHHHHhHhh
Q 004195 739 PKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 739 P~~RPs~~evl~~l~~~ 755 (769)
+..||++.++...++|.
T Consensus 253 ~~~rp~~~~l~~~~ff~ 269 (700)
T KOG2137|consen 253 SAVRPTLDLLLSIPFFS 269 (700)
T ss_pred cccCcchhhhhcccccC
Confidence 99999999988877764
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.40 E-value=7.5e-09 Score=113.23 Aligned_cols=103 Identities=30% Similarity=0.396 Sum_probs=60.4
Q ss_pred CceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccC
Q 004195 138 LEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSA 217 (769)
Q Consensus 138 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~ 217 (769)
|.+.+.++|++. ..-.++.-++.|+.|||++|+++.. +.+..|++|++|||++|.+....--...++. |+.|.+++
T Consensus 166 L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrn 241 (1096)
T KOG1859|consen 166 LATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRN 241 (1096)
T ss_pred HhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhhh-heeeeecc
Confidence 445556666665 4555566666666677777766532 2566666667777777766633222333444 66666666
Q ss_pred ccccccCCCCCCCccCcEEeccCCcCCC
Q 004195 218 NHLSGEIPDLRNLKNLRVFDVQDNYFGP 245 (769)
Q Consensus 218 N~l~~~~p~l~~l~~L~~l~l~~N~l~~ 245 (769)
|.++ .+-++.+|.+|+.||+++|-+.+
T Consensus 242 N~l~-tL~gie~LksL~~LDlsyNll~~ 268 (1096)
T KOG1859|consen 242 NALT-TLRGIENLKSLYGLDLSYNLLSE 268 (1096)
T ss_pred cHHH-hhhhHHhhhhhhccchhHhhhhc
Confidence 6665 33455566666666666665543
|
|
| >COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.8e-05 Score=82.61 Aligned_cols=263 Identities=9% Similarity=0.087 Sum_probs=143.8
Q ss_pred CcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCCcceEEEEE
Q 004195 484 SSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPSISIIYLIF 562 (769)
Q Consensus 484 ~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~~~lV~ 562 (769)
....+|+|+.+.+|-.-.- +. .+.|+.+....... ...+..|... .||-+-.=+.+=..--+.........+.|
T Consensus 15 ~gr~LgqGgea~ly~l~e~-~d-~VAKIYh~Pppa~~---aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm 89 (637)
T COG4248 15 PGRPLGQGGEADLYTLGEV-RD-QVAKIYHAPPPAAQ---AQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM 89 (637)
T ss_pred CCccccCCccceeeecchh-hc-hhheeecCCCchHH---HHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence 3577999999999965321 12 23466654322111 1123334443 56644331211111001111122366778
Q ss_pred eccCCCc-hhhhhc-----CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 563 EYAPNET-LRSFIS-----GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 563 Ey~~~gs-L~~~l~-----~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..+++.. ...++. ++-....|...+++++.+|.+-+-||.. |.+-+|+.++|+|+.+++.+.+.|=..-..
T Consensus 90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi 166 (637)
T COG4248 90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDSFQI 166 (637)
T ss_pred ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEcccceee
Confidence 7776542 233332 2234578999999999999999999999 999999999999999999999887432111
Q ss_pred hhcc-CCcceeecCCCcchhhhc-----cCCCCCCCCeeehhHHHHHHHhC-CCCCCCchhH-----HHH-hhhhhcccc
Q 004195 637 AEAR-GKGSAEVSSPAKKTSVLA-----RTEQDDKSDVYDIGIILIEIIVG-RPITSENVVV-----LVK-DLLQVNIGT 703 (769)
Q Consensus 637 ~~~~-~~~~~~~~~~~~~pe~~~-----~~~~~~ksDVwS~Gvil~elltG-~~p~~~~~~~-----~~~-~~~~~~~~~ 703 (769)
...+ ......+.+-+.+||... +..-+...|-|.+||++++++.| +.||.+-... ..+ .+....+..
T Consensus 167 ~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~y 246 (637)
T COG4248 167 NANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAY 246 (637)
T ss_pred ccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeee
Confidence 1111 111222333344555432 33457889999999999999987 8888642100 000 111111111
Q ss_pred ccccccccCccccCCCCHH-HHHHHHHHHHHcCcCC--CCCCCCHHHHHHHhHhh
Q 004195 704 DEARKSIVDPAVMNECSDE-SLKRMMELCLRCLSNE--PKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 704 ~~~~~~~~d~~~~~~~~~~-~~~~l~~li~~cl~~d--P~~RPs~~evl~~l~~~ 755 (769)
......-..|.. .+.+-+ ....+..+..+|.... +.-|||++.-+..+...
T Consensus 247 a~~~~~g~~p~P-~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al 300 (637)
T COG4248 247 ASDQRRGLKPPP-RSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDAL 300 (637)
T ss_pred chhccCCCCCCC-CCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHH
Confidence 111000011110 111211 1233566666777653 56899999877766644
|
|
| >PRK09902 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=4.3e-06 Score=81.26 Aligned_cols=142 Identities=6% Similarity=-0.025 Sum_probs=103.3
Q ss_pred CccccCCceeEEEEEeCCCcEEEEEEccccC------CCChhHHHHHHHHHhhccCC--ceeeEeeeeeccCCCCCCcce
Q 004195 486 SFMCDASHGQIYKGKLTDGTLVAIRSLKMSK------KSSPHMYTYHIELISKLRHS--NLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~------~~~~~~~~~Ei~~l~~l~H~--nIv~l~~~~~~~~~~~~~~~~ 557 (769)
-=-|+||.+-||+..+. |..+=+|+-...- ......|.+|...+.++... .+.+.+ ++.... .+....
T Consensus 24 pN~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k--~~~~~r 99 (216)
T PRK09902 24 PNYRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVK--IEGEWR 99 (216)
T ss_pred CCcCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeec--cCCceE
Confidence 33477999999998775 4468888775221 22456799999999998532 244444 332111 122445
Q ss_pred EEEEEeccCC-CchhhhhcCCC-CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCce--eeecCCCC
Q 004195 558 IYLIFEYAPN-ETLRSFISGPG-YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH--VKINSYNL 633 (769)
Q Consensus 558 ~~lV~Ey~~~-gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~--~kl~DFGl 633 (769)
.+||+|-+++ -||.+++.... .+.+...+..+..++++.++-||+. ++.|+|+-+.||+++.++. ++++||--
T Consensus 100 A~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk 176 (216)
T PRK09902 100 ALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEK 176 (216)
T ss_pred EEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhc
Confidence 7899997753 58888886432 2457778889999999999999999 9999999999999986666 99999975
Q ss_pred c
Q 004195 634 P 634 (769)
Q Consensus 634 a 634 (769)
+
T Consensus 177 ~ 177 (216)
T PRK09902 177 S 177 (216)
T ss_pred c
Confidence 4
|
|
| >KOG2982 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.31 E-value=8.6e-08 Score=94.76 Aligned_cols=176 Identities=22% Similarity=0.256 Sum_probs=78.9
Q ss_pred CCcCceeeccCcccCC--cCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCccc-CCccccCCCCCC
Q 004195 135 SSSLEILNLSSNYLSG--SIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGF-LPVSLTGLQSLR 211 (769)
Q Consensus 135 l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~l~~l~~L~ 211 (769)
.+.++.|||.+|.|+. .+-.-+.+|+.|++|+|+.|.+...|-..-..+.+|+.|-|.+..+... ....+..++.++
T Consensus 70 ~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vt 149 (418)
T KOG2982|consen 70 VTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVT 149 (418)
T ss_pred hhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhh
Confidence 4455566666666552 2233344556666666666665533322213445566666655544422 123344556666
Q ss_pred EEEccCcccccc----------CCC---CCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCCc
Q 004195 212 VVSLSANHLSGE----------IPD---LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQ 278 (769)
Q Consensus 212 ~L~ls~N~l~~~----------~p~---l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~ 278 (769)
.|.+|.|++... -|. +..++.+..+.++-|++.-.+ +++..+.+..|.+...-.-..+..++.
T Consensus 150 elHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~F----pnv~sv~v~e~PlK~~s~ek~se~~p~ 225 (418)
T KOG2982|consen 150 ELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIF----PNVNSVFVCEGPLKTESSEKGSEPFPS 225 (418)
T ss_pred hhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhc----ccchheeeecCcccchhhcccCCCCCc
Confidence 666666643211 111 222233333333334333222 233344444443332211233344444
Q ss_pred CcEEeccCccccccC-CccCCCCCCCCEEEccCCcCC
Q 004195 279 LQKLDISLNRFVGPF-IPSLLSLPSITYLDIHGNKLT 314 (769)
Q Consensus 279 L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~l~~N~l~ 314 (769)
+..|+|+.|++...- ...+.++++|..|.+++|.+.
T Consensus 226 ~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~ 262 (418)
T KOG2982|consen 226 LSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLS 262 (418)
T ss_pred chhhhhcccccccHHHHHHHcCCchhheeeccCCccc
Confidence 555555555553321 123445555555555555443
|
|
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.8e-08 Score=88.31 Aligned_cols=102 Identities=25% Similarity=0.334 Sum_probs=52.0
Q ss_pred EEEeecccccCCCCcc---ccCCCcCceeeccCcccCCcCCccccCC-CcCCEEEcccCcCCccCCccCcCCcCCCEEec
Q 004195 116 VLSLVSLGLWGPLPGS---IAHSSSLEILNLSSNYLSGSIPVQISSL-RNLQTLILDDNKFTGAVPSELSLLQVLSVLSL 191 (769)
Q Consensus 116 ~L~L~~n~l~g~~p~~---~~~l~~L~~L~Ls~N~l~g~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 191 (769)
.++|+++.+ +.+++. +....+|+..+|++|.|. ..|+.|... +.+++|+|++|+|+ .+|.++..++.|+.|++
T Consensus 31 ~ldLssc~l-m~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl 107 (177)
T KOG4579|consen 31 FLDLSSCQL-MYIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNL 107 (177)
T ss_pred hcccccchh-hHHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhccc
Confidence 455555554 223332 333344444556666555 344444332 35555556666555 45555555555555555
Q ss_pred cCCCCcccCCccccCCCCCCEEEccCcccc
Q 004195 192 KNNSLSGFLPVSLTGLQSLRVVSLSANHLS 221 (769)
Q Consensus 192 ~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~ 221 (769)
++|.|. ..|..+..|.+|..|+..+|.+.
T Consensus 108 ~~N~l~-~~p~vi~~L~~l~~Lds~~na~~ 136 (177)
T KOG4579|consen 108 RFNPLN-AEPRVIAPLIKLDMLDSPENARA 136 (177)
T ss_pred ccCccc-cchHHHHHHHhHHHhcCCCCccc
Confidence 555555 34444444555555555555543
|
|
| >COG0661 AarF Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.27 E-value=3.3e-06 Score=93.93 Aligned_cols=139 Identities=14% Similarity=0.172 Sum_probs=91.5
Q ss_pred cCccccCCceeEEEEEeCCCcEEEEEEccccCC----------------------C----C--------------hhHHH
Q 004195 485 SSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKK----------------------S----S--------------PHMYT 524 (769)
Q Consensus 485 ~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~----------------------~----~--------------~~~~~ 524 (769)
.+-|+.++-|.||+|++++|+.||||+.+..-. . + +-++.
T Consensus 130 ~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 130 PEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CCchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 367899999999999999999999998854310 0 0 01234
Q ss_pred HHHHHHhhcc----CCceeeEeeeeeccCCCCCCcceEEEEEeccCCCchhhhh--cCCCCCCCHHHHHHHHHHHHHHh-
Q 004195 525 YHIELISKLR----HSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFI--SGPGYKLTWVQRIAAAIAIVKGV- 597 (769)
Q Consensus 525 ~Ei~~l~~l~----H~nIv~l~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l--~~~~~~l~~~~~~~i~~~ia~gL- 597 (769)
+|..-+.+++ +.-=+++-.+|++... ...|+|||++|-.+.+.. +.. ..+ +..++..++++.
T Consensus 210 ~EA~n~~~~~~nf~~~~~v~VP~V~we~t~------~~VLtmE~i~Gi~i~d~~~l~~~--g~d---~k~ia~~~~~~f~ 278 (517)
T COG0661 210 REAANAERFRENFKDDPDVYVPKVYWEYTT------RRVLTMEWIDGIKISDIAALKSA--GID---RKELAELLVRAFL 278 (517)
T ss_pred HHHHHHHHHHHHcCCCCCeEeceeehhccC------CcEEEEEeeCCEecccHHHHHhc--CCC---HHHHHHHHHHHHH
Confidence 4555555542 2333344455544222 258999999998888874 333 344 333333333321
Q ss_pred cccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 598 QFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 598 ~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.-+-.. |++|.|..|.||+++.+++.-+.|||+....
T Consensus 279 ~q~~~d---gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l 315 (517)
T COG0661 279 RQLLRD---GFFHADPHPGNILVRSDGRIVLLDFGIVGRL 315 (517)
T ss_pred HHHHhc---CccccCCCccceEEecCCcEEEEcCcceecC
Confidence 222224 8999999999999999999999999997433
|
|
| >COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.26 E-value=5.3e-06 Score=81.62 Aligned_cols=152 Identities=12% Similarity=0.121 Sum_probs=100.7
Q ss_pred ccCHHHHHHHhcCCCCcCccc---cCCceeEEEEEeCCCcEEEEEEccccCCC-------------------ChhH----
Q 004195 469 TFTLDELKEATDCFDSSSFMC---DASHGQIYKGKLTDGTLVAIRSLKMSKKS-------------------SPHM---- 522 (769)
Q Consensus 469 ~~~~~el~~~t~~f~~~~~iG---~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~-------------------~~~~---- 522 (769)
..|++.+....+...+....| .|.-+.||+|.-.++..+|||+.+..... ..++
T Consensus 34 ~~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~ 113 (268)
T COG1718 34 KRTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFA 113 (268)
T ss_pred hHHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHH
Confidence 356667777776666655554 56667899999888999999998643111 1111
Q ss_pred -HHHHHHHHhhcc--CCceeeEeeeeeccCCCCCCcceEEEEEeccCCC-chhhhhcCCCCCCCHHHHHHHHHHHHHHhc
Q 004195 523 -YTYHIELISKLR--HSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNE-TLRSFISGPGYKLTWVQRIAAAIAIVKGVQ 598 (769)
Q Consensus 523 -~~~Ei~~l~~l~--H~nIv~l~~~~~~~~~~~~~~~~~~lV~Ey~~~g-sL~~~l~~~~~~l~~~~~~~i~~~ia~gL~ 598 (769)
..+|..-|.++. +=.+.+.+++.. -.|||||+... .-.-.|+..+ +...+...+..++++.+.
T Consensus 114 W~~kEf~NL~R~~eAGVrvP~Pi~~~~-----------nVLvMEfIg~~g~pAP~LkDv~--~e~~e~~~~~~~~v~~~~ 180 (268)
T COG1718 114 WARKEFRNLKRAYEAGVRVPEPIAFRN-----------NVLVMEFIGDDGLPAPRLKDVP--LELEEAEGLYEDVVEYMR 180 (268)
T ss_pred HHHHHHHHHHHHHHcCCCCCCceeecC-----------CeEEEEeccCCCCCCCCcccCC--cCchhHHHHHHHHHHHHH
Confidence 235777777763 444556665543 37999999643 1122222221 222245566677777777
Q ss_pred cccc-CCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 599 FLHT-GIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 599 yLH~-~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
-|-. . ++||+||..=|||+. ++.+.|+|||-|...
T Consensus 181 ~l~~~a---~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~ 216 (268)
T COG1718 181 RLYKEA---GLVHGDLSEYNILVH-DGEPYIIDVSQAVTI 216 (268)
T ss_pred HHHHhc---CcccccchhhheEEE-CCeEEEEECcccccc
Confidence 6655 4 999999999999999 889999999987544
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 769 | ||||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 5e-23 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 5e-22 | ||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 2e-19 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 2e-18 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 2e-10 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 4e-10 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 4e-10 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 6e-10 | ||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 5e-09 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 5e-09 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 3e-07 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 5e-07 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 5e-07 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 5e-07 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 6e-07 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 6e-07 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 6e-07 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 7e-07 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 7e-07 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 9e-07 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 1e-06 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 1e-06 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 1e-06 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 1e-06 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 2e-06 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 2e-06 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 2e-06 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 3e-06 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 3e-06 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 7e-06 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 1e-05 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 1e-05 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 1e-05 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 3e-05 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 3e-05 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 3e-05 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 3e-05 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 4e-05 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 4e-05 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 4e-05 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 4e-05 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 4e-05 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 4e-05 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 4e-05 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 4e-05 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 4e-05 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 4e-05 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 4e-05 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 4e-05 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 4e-05 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 4e-05 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 4e-05 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 4e-05 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 4e-05 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 4e-05 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 4e-05 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 4e-05 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 4e-05 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 5e-05 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 5e-05 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 9e-05 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 2e-04 | ||
| 2a19_B | 284 | Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng | 2e-04 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 2e-04 | ||
| 4e4l_A | 302 | Jak1 Kinase (Jh1 Domain) In Complex With Compound 3 | 2e-04 | ||
| 3eyg_A | 290 | Crystal Structures Of Jak1 And Jak2 Inhibitor Compl | 3e-04 | ||
| 3omv_A | 307 | Crystal Structure Of C-Raf (Raf-1) Length = 307 | 6e-04 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 8e-04 |
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290 | Back alignment and structure |
|
| >pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 180 bits (458), Expect = 5e-51
Identities = 88/317 (27%), Positives = 144/317 (45%), Gaps = 51/317 (16%)
Query: 468 RTFTLDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMY---T 524
L +L+EAT+ FD + G++YKG L DG VA+ K S
Sbjct: 27 YRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVAL---KRRTPESSQGIEEFE 83
Query: 525 YHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISG---PGYKL 581
IE +S RH +LVS +G C + + I LI++Y N L+ + G P +
Sbjct: 84 TEIETLSFCRHPHLVSLIGFCDE---RNEMI----LIYKYMENGNLKRHLYGSDLPTMSM 136
Query: 582 TWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARG 641
+W QR+ I +G+ +LHT + ++K ++LLDENF KI + +
Sbjct: 137 SWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELD 193
Query: 642 KGSAEVSSPAKKTSVL----------ARTEQ-DDKSDVYDIGIILIEIIVGRPITSENVV 690
+ +S T V + +KSDVY G++L E++ R +
Sbjct: 194 QT--HLS-----TVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARS-----AI 241
Query: 691 VLVKDLLQVNIGTDEAR--------KSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDR 742
V VN+ + A + IVDP + ++ ESL++ + ++CL+ +DR
Sbjct: 242 VQSLPREMVNL-AEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDR 300
Query: 743 PSVEDTLWNLQFATQIQ 759
PS+ D LW L++A ++Q
Sbjct: 301 PSMGDVLWKLEYALRLQ 317
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 184 bits (469), Expect = 5e-49
Identities = 78/278 (28%), Positives = 121/278 (43%), Gaps = 27/278 (9%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSS 136
L L I+ N I+G + + +L+ L + S +P + S
Sbjct: 179 ELKHLAIS---GNKISGDV-----------DVSRCVNLEFLDVSSNNFSTGIP-FLGDCS 223
Query: 137 SLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSL 196
+L+ L++S N LSG IS+ L+ L + N+F G +P L+ L LSL N
Sbjct: 224 ALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKF 281
Query: 197 SGFLPVSLTG-LQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRLH--- 251
+G +P L+G +L + LS NH G +P + L + N F P
Sbjct: 282 TGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLK 341
Query: 252 -KKMVTLVLRNNRFQFGLNPDELRS-YNQLQKLDISLNRFVGPFIPSL--LSLPSITYLD 307
+ + L L N F G P+ L + L LD+S N F GP +P+L ++ L
Sbjct: 342 MRGLKVLDLSFNEFS-GELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELY 400
Query: 308 IHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCL 345
+ N TG + +S +L + LS N L+G +PS L
Sbjct: 401 LQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSL 438
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 177 bits (451), Expect = 8e-47
Identities = 72/269 (26%), Positives = 124/269 (46%), Gaps = 15/269 (5%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSS 136
L LH++ N ++G T S+LGSLS L+ L L L G +P + +
Sbjct: 419 ELVSLHLS---FNYLSG---------TIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVK 466
Query: 137 SLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSL 196
+LE L L N L+G IP +S+ NL + L +N+ TG +P + L+ L++L L NNS
Sbjct: 467 TLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSF 526
Query: 197 SGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRLHKKMV 255
SG +P L +SL + L+ N +G IP + + + +
Sbjct: 527 SGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGK-IAANFIAGKRYVYIKNDGMKK 585
Query: 256 TLVLRNNRFQF-GLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLT 314
N +F G+ ++L + +I+ + G P+ + S+ +LD+ N L+
Sbjct: 586 ECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLS 645
Query: 315 GLLLQNMSCNPQLAFVDLSSNLLTGYLPS 343
G + + + P L ++L N ++G +P
Sbjct: 646 GYIPKEIGSMPYLFILNLGHNDISGSIPD 674
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 177 bits (451), Expect = 9e-47
Identities = 79/299 (26%), Positives = 126/299 (42%), Gaps = 28/299 (9%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHS- 135
+ + L ++N ++ S L+SL+VL L + + G S
Sbjct: 124 SCSGLKFLNVSSNTLDFPGK--------VSGGLKLNSLEVLDLSANSISGANVVGWVLSD 175
Query: 136 --SSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKN 193
L+ L +S N +SG + +S NL+ L + N F+ +P L L L +
Sbjct: 176 GCGELKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISG 232
Query: 194 NSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPR---- 249
N LSG +++ L+++++S+N G IP L LK+L+ + +N F P
Sbjct: 233 NKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL-PLKSLQYLSLAENKFTGEIPDFLSG 291
Query: 250 LHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLS-LPSITYLDI 308
+ L L N F G P S + L+ L +S N F G L + + LD+
Sbjct: 292 ACDTLTGLDLSGNHFY-GAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDL 350
Query: 309 HGNKLTGLL---LQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRL-VLY-SKNCLS 362
N+ +G L L N+S L +DLSSN +G + L K L LY N +
Sbjct: 351 SFNEFSGELPESLTNLS--ASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFT 407
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 171 bits (435), Expect = 1e-44
Identities = 85/326 (26%), Positives = 137/326 (42%), Gaps = 36/326 (11%)
Query: 32 QYQTLVRIQQLLNYPSVSSSFNTTTVTDFCN---IEPTPSLTLVCYEDNLTQLHIAGDNN 88
+ L+ + +L ++ +++ + C + C +D +T + ++
Sbjct: 13 EIHQLISFKDVLPDKNLLPDWSSNK--NPCTFDGV--------TCRDDKVTSIDLSSKPL 62
Query: 89 NNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYL 148
N S+L SL+ L+ L L + + G + S+SL L+LS N L
Sbjct: 63 NVGFS---------AVSSSLLSLTGLESLFLSNSHINGSVS-GFKCSASLTSLDLSRNSL 112
Query: 149 SGSIP--VQISSLRNLQTLILDDNKFTGAVPSELSL-LQVLSVLSLKNNSLSGFLPVSLT 205
SG + + S L+ L + N L L L VL L NS+SG V
Sbjct: 113 SGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWV 172
Query: 206 ---GLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRL--HKKMVTLVLR 260
G L+ +++S N +SG++ + NL DV N F P L + L +
Sbjct: 173 LSDGCGELKHLAISGNKISGDVD-VSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDIS 231
Query: 261 NNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQN 320
N+ G + + +L+ L+IS N+FVGP IP L L S+ YL + NK TG +
Sbjct: 232 GNKLS-GDFSRAISTCTELKLLNISSNQFVGP-IPP-LPLKSLQYLSLAENKFTGEIPDF 288
Query: 321 MSCN-PQLAFVDLSSNLLTGYLPSCL 345
+S L +DLS N G +P
Sbjct: 289 LSGACDTLTGLDLSGNHFYGAVPPFF 314
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 164 bits (417), Expect = 2e-42
Identities = 75/293 (25%), Positives = 124/293 (42%), Gaps = 32/293 (10%)
Query: 77 NLTQLHIAGDNNNNINGG----------------LAHNFSTDTFFSTLG--SLSSLKVLS 118
L L ++ N +G L+ N + L ++L+ L
Sbjct: 344 GLKVLDLS---FNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELY 400
Query: 119 LVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPS 178
L + G G +P ++++ S L L+LS NYLSG+IP + SL L+ L L N G +P
Sbjct: 401 LQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ 460
Query: 179 ELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIP-DLRNLKNLRVFD 237
EL ++ L L L N L+G +P L+ +L +SLS N L+GEIP + L+NL +
Sbjct: 461 ELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILK 520
Query: 238 VQDNYF-GPRFPRLH--KKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFI 294
+ +N F G L + ++ L L N F G P + Q I+ N G
Sbjct: 521 LSNNSFSGNIPAELGDCRSLIWLDLNTNLFN-GTIPAAMFK----QSGKIAANFIAGKRY 575
Query: 295 PSLLSLPSITYLDIHGN--KLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCL 345
+ + GN + G+ + ++ +++S + G+
Sbjct: 576 VYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTF 628
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 143 bits (362), Expect = 2e-35
Identities = 61/289 (21%), Positives = 101/289 (34%), Gaps = 49/289 (16%)
Query: 77 NLTQLHIAGDNNNNINGG---------------LAHNFSTDTFFSTLGSLSSLKVLSLVS 121
L L + + N++ G L++N T +G L +L +L L +
Sbjct: 467 TLETLIL---DFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSN 523
Query: 122 LGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELS 181
G +P + SL L+L++N +G+IP + + N G +
Sbjct: 524 NSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGK----IAANFIAGKRYVYIK 579
Query: 182 LLQVLSVLSLKNN--SLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDV 238
+ N G L L + ++++ G N ++ D
Sbjct: 580 NDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLD- 638
Query: 239 QDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLL 298
+ N G P E+ S L L++ N G IP +
Sbjct: 639 --------------------MSYNMLS-GYIPKEIGSMPYLFILNLGHNDISGS-IPDEV 676
Query: 299 S-LPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQ 346
L + LD+ NKL G + Q MS L +DLS+N L+G +P Q
Sbjct: 677 GDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQ 725
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 1e-27
Identities = 41/128 (32%), Positives = 69/128 (53%)
Query: 106 STLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTL 165
L LS+ ++ S G + ++ S+ L++S N LSG IP +I S+ L L
Sbjct: 602 EQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFIL 661
Query: 166 ILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIP 225
L N +G++P E+ L+ L++L L +N L G +P +++ L L + LS N+LSG IP
Sbjct: 662 NLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
Query: 226 DLRNLKNL 233
++ +
Sbjct: 722 EMGQFETF 729
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 2e-05
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Query: 277 NQLQKLDIS---LNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLS 333
+++ +D+S LN SLLSL + L + + + G + C+ L +DLS
Sbjct: 50 DKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSV-SGFKCSASLTSLDLS 108
Query: 334 SNLLTGYLPSCLQ 346
N L+G + +
Sbjct: 109 RNSLSGPVTTLTS 121
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 168 bits (429), Expect = 4e-47
Identities = 64/248 (25%), Positives = 104/248 (41%), Gaps = 15/248 (6%)
Query: 106 STLGSLSSLKVLSLVSLGLWG--PLPGSIAHSSSLEILNLSS-NYLSGSIPVQISSLRNL 162
T + L L L L P+P S+A+ L L + N L G IP I+ L L
Sbjct: 44 DTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQL 103
Query: 163 QTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSG 222
L + +GA+P LS ++ L L N+LSG LP S++ L +L ++ N +SG
Sbjct: 104 HYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISG 163
Query: 223 EIPD-LRNLKNLRVF-DVQDNYFGPRFPRL--HKKMVTLVLRNNRFQFGLNPDELRSYNQ 278
IPD + L + N + P + + + L N + G S
Sbjct: 164 AIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLE-GDASVLFGSDKN 222
Query: 279 LQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLL---LQNMSCNPQLAFVDLSSN 335
QK+ ++ N + + ++ LD+ N++ G L L + L +++S N
Sbjct: 223 TQKIHLAKNSLAFD-LGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLK---FLHSLNVSFN 278
Query: 336 LLTGYLPS 343
L G +P
Sbjct: 279 NLCGEIPQ 286
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 7e-42
Identities = 78/337 (23%), Positives = 126/337 (37%), Gaps = 59/337 (17%)
Query: 34 QTLVRIQQLLNYPSVSSSFNTTTVTDFCNIE---PTPSLTLVCYEDNLTQLHIAGDNNNN 90
Q L++I++ L P+ SS+ TT D CN Y + L ++ N
Sbjct: 9 QALLQIKKDLGNPTTLSSWLPTT--DCCNRTWLGVLCDTDTQTY--RVNNLDLS---GLN 61
Query: 91 ING------------GLAH-NFSTDTFFS-----TLGSLSSLKVLSLVSLGLWGPLPGSI 132
+ L + L+ L L + + G +P +
Sbjct: 62 LPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFL 121
Query: 133 AHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLS-VLSL 191
+ +L L+ S N LSG++P ISSL NL + D N+ +GA+P L +++
Sbjct: 122 SQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTI 181
Query: 192 KNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRL 250
N L+G +P + L +L V LS N L G+ + KN +
Sbjct: 182 SRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIH------------- 227
Query: 251 HKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIP-SLLSLPSITYLDIH 309
L N F L ++ L LD+ NR G +P L L + L++
Sbjct: 228 --------LAKNSLAFDL-G-KVGLSKNLNGLDLRNNRIYGT-LPQGLTQLKFLHSLNVS 276
Query: 310 GNKLTGLLLQNMSCNPQLAFVDLSSN--LLTGYLPSC 344
N L G + Q + + ++N L LP+C
Sbjct: 277 FNNLCGEIPQGGNL-QRFDVSAYANNKCLCGSPLPAC 312
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 99 bits (250), Expect = 4e-23
Identities = 48/189 (25%), Positives = 72/189 (38%), Gaps = 18/189 (9%)
Query: 169 DNKFTGAVPSELSLLQVLSVLSLKNNSLSG--FLPVSLTGLQSLRVVSLS-ANHLSGEIP 225
+ + G + + ++ L L +L +P SL L L + + N+L G IP
Sbjct: 35 NRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIP 94
Query: 226 D-LRNLKNLRVFDVQDNYFGPRFP----RLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQ 280
+ L L + P ++ K +VTL N G P + S L
Sbjct: 95 PAIAKLTQLHYLYITHTNVSGAIPDFLSQI-KTLVTLDFSYNALS-GTLPPSISSLPNLV 152
Query: 281 KLDISLNRFVGPFIPSLLSLPS-ITYLDIHGNKLTGLL---LQNMSCNPQLAFVDLSSNL 336
+ NR G S S T + I N+LTG + N++ LAFVDLS N+
Sbjct: 153 GITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN----LAFVDLSRNM 208
Query: 337 LTGYLPSCL 345
L G
Sbjct: 209 LEGDASVLF 217
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 142 bits (361), Expect = 1e-37
Identities = 74/301 (24%), Positives = 144/301 (47%), Gaps = 44/301 (14%)
Query: 468 RTFTLDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLK-MSKKSSPHMYTYH 526
+ F+L EL+ A+D F + + + G++YKG+L DGTLVA++ LK + +
Sbjct: 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTE 77
Query: 527 IELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGY---KLTW 583
+E+IS H NL+ G C+ + L++ Y N ++ S + L W
Sbjct: 78 VEMISMAVHRNLLRLRGFCMT---PTERL----LVYPYMANGSVASCLRERPESQPPLDW 130
Query: 584 VQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKG 643
+R A+ +G+ +LH P + ++K ++LLDE F + + LA+
Sbjct: 131 PKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG---LAKLMDYK 187
Query: 644 SAEVSSPAKKTSVL----------ARTEQ-DDKSDVYDIGIILIEIIVGRP------ITS 686
V+ T+V T + +K+DV+ G++L+E+I G+ + +
Sbjct: 188 DTHVT-----TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAN 242
Query: 687 ENVVVLV---KDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRP 743
++ V+L+ K LL+ ++ +++VD + DE +++++++ L C + P +RP
Sbjct: 243 DDDVMLLDWVKGLLK-----EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERP 297
Query: 744 S 744
Sbjct: 298 K 298
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 144 bits (364), Expect = 4e-36
Identities = 34/254 (13%), Positives = 96/254 (37%), Gaps = 19/254 (7%)
Query: 105 FSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQT 164
F + + + + + L + + + +P + +L +Q
Sbjct: 218 FVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQL 277
Query: 165 LILDDNKFTGA--------VPSELSLLQVLSVLSLKNNSL-SGFLPVSLTGLQSLRVVSL 215
+ + N+ ++ + + + ++ + N+L + + SL ++ L ++
Sbjct: 278 INVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLEC 337
Query: 216 SANHLSGEIPDLRNLKNLRVFDVQDNYFG---PRFPRLHKKMVTLVLRNNRFQFGLNPDE 272
N L G++P + L ++ N F +++ L +N+ ++ N +
Sbjct: 338 LYNQLEGKLPAFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLKYIPNIFD 397
Query: 273 LRSYNQLQKLDISLNRFVG-------PFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNP 325
+S + + +D S N P P+ +++ +++ N+++ + S
Sbjct: 398 AKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGS 457
Query: 326 QLAFVDLSSNLLTG 339
L+ ++L N+LT
Sbjct: 458 PLSSINLMGNMLTE 471
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 125 bits (317), Expect = 3e-30
Identities = 33/247 (13%), Positives = 76/247 (30%), Gaps = 17/247 (6%)
Query: 107 TLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSG----SIPVQISSLRNL 162
+L S + LSL G G +P +I + LE+L L S+ P IS+ +
Sbjct: 76 SLNSNGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSD 135
Query: 163 QTLILDDNKFTGAVPSELSLLQV--LSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHL 220
+ + L + ++ + S + +N++
Sbjct: 136 EQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNI 195
Query: 221 SGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQ 280
+ + L LR F + ++ F + + + + L
Sbjct: 196 TFVSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQ---YKTEDLKWDNLKDLT 252
Query: 281 KLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGL--------LLQNMSCNPQLAFVDL 332
+++ + L +LP + +++ N+ L + ++ + +
Sbjct: 253 DVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYI 312
Query: 333 SSNLLTG 339
N L
Sbjct: 313 GYNNLKT 319
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 4e-29
Identities = 52/303 (17%), Positives = 92/303 (30%), Gaps = 54/303 (17%)
Query: 77 NLTQLHIAGDNNNNING---------------GLAHN-FSTDTFFSTLGSLSSLKVLSL- 119
L L++ N I AHN S+S + +
Sbjct: 354 KLASLNL---AYNQITEIPANFCGFTEQVENLSFAHNKLKYIPNIFDAKSVSVMSAIDFS 410
Query: 120 ------VSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFT 173
V + PL + ++ +NLS+N +S S+ L ++ L N T
Sbjct: 411 YNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT 470
Query: 174 G-------AVPSELSLLQVLSVLSLKNNSLSGFLP-VSLTGLQSLRVVSLSANHLSGEIP 225
+L+ + L+ N L+ T L L + LS N S
Sbjct: 471 EIPKNSLKDENENFKNTYLLTSIDLRFNKLTKLSDDFRATTLPYLVGIDLSYNSFSKFPT 530
Query: 226 DLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDIS 285
N L+ F +++ + NR P+ + L +L I
Sbjct: 531 QPLNSSTLKGFGIRNQ---------------RDAQGNRT-LREWPEGITLCPSLTQLQIG 574
Query: 286 LNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCL 345
N + + P+I+ LDI N + L + + L + + C
Sbjct: 575 SNDIRK--VNEKI-TPNISVLDIKDNPNISIDLSYVCPYIEAGMYMLFYDKTQ-DIRGCD 630
Query: 346 QVE 348
++
Sbjct: 631 ALD 633
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 7e-28
Identities = 46/309 (14%), Positives = 100/309 (32%), Gaps = 58/309 (18%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSL----VSLGLWGPLPGSI 132
+T L + +G + +G L+ L+VL+L + P I
Sbjct: 82 RVTGLSL---EGFGASGRVP---------DAIGQLTELEVLALGSHGEKVNERLFGPKGI 129
Query: 133 AHSSSLEILNLSSNYLSGSIPVQISSLR--NLQTLILDDNKFTGAVPSELSLLQVLSVLS 190
+ + S E + + +L ++ + ++ + + +
Sbjct: 130 SANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIG 189
Query: 191 LKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIP--------------------DLRNL 230
+N+++ + ++ L LR + + E NL
Sbjct: 190 QLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNL 248
Query: 231 KNLRVFDVQDNYFGPRFP----RLHKKMVTLVLRNNRFQ-------FGLNPDELRSYNQL 279
K+L +V + + P L +M + + NR + ++
Sbjct: 249 KDLTDVEVYNCPNLTKLPTFLKAL-PEMQLINVACNRGISGEQLKDDWQALADAPVGEKI 307
Query: 280 QKLDISLNRF-VGPFIPSLLSLPSITYLDIHGNKLTGLL--LQNMSCNPQLAFVDLSSNL 336
Q + I N P SL + + L+ N+L G L + +LA ++L+ N
Sbjct: 308 QIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLPAFGSEI---KLASLNLAYNQ 364
Query: 337 LTGYLPSCL 345
+T +P+
Sbjct: 365 ITE-IPANF 372
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 88.9 bits (221), Expect = 2e-18
Identities = 35/214 (16%), Positives = 67/214 (31%), Gaps = 17/214 (7%)
Query: 142 NLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSG--- 198
N + V ++S + L L+ +G VP + L L VL+L ++
Sbjct: 63 NKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNER 122
Query: 199 -FLPVSLTGLQSLRVVSLSANHLSGEIPD---LRNLKNLRVFDVQDNYFGPRFP---RLH 251
F P ++ S H D + +L + + R+
Sbjct: 123 LFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRIT 182
Query: 252 KKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGN 311
K + +N F + +L++ + + FV I + Y +
Sbjct: 183 LKDTQIGQLSNNITF--VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKT 240
Query: 312 KLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCL 345
L N+ L V++ + LP+ L
Sbjct: 241 --EDLKWDNLK---DLTDVEVYNCPNLTKLPTFL 269
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 136 bits (346), Expect = 6e-36
Identities = 78/338 (23%), Positives = 133/338 (39%), Gaps = 74/338 (21%)
Query: 456 ETMKMGASLPAYRTFTLDELKEATDCFDSSSFMCDASH------GQIYKGKLTDGTLVAI 509
E + S + +F+ ELK T+ FD + G +YKG + + T VA+
Sbjct: 1 ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAV 59
Query: 510 RSLKMSKKSSPHM----YTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYA 565
+ L + + I++++K +H NLV LG D D L++ Y
Sbjct: 60 KKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSD---GDDLC----LVYVYM 112
Query: 566 PNETLRSFISGPGYK--LTWVQRIAAAIAIVKGVQFLHTGIVPGVFSN---NLKITDVLL 620
PN +L +S L+W R A G+ FLH + ++K ++LL
Sbjct: 113 PNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN------HHIHRDIKSANILL 166
Query: 621 DENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLAR-----------------TEQD 663
DE F KI+ + L A S +T + +R T
Sbjct: 167 DEAFTAKISDFGL-----------ARASEKFAQTVMTSRIVGTTAYMAPEALRGEITP-- 213
Query: 664 DKSDVYDIGIILIEIIVGRPITS-----ENVVVLVKDLLQVNIGTDEARK--SIVDPAVM 716
KSD+Y G++L+EII G P + ++ + +++ E + +D M
Sbjct: 214 -KSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIED------EEKTIEDYIDKK-M 265
Query: 717 NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754
N+ S++ M + +CL + RP ++ LQ
Sbjct: 266 NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 303
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 140 bits (354), Expect = 1e-34
Identities = 50/250 (20%), Positives = 85/250 (34%), Gaps = 12/250 (4%)
Query: 106 STLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTL 165
L LKVL+L L + A ++L L+L SN + +NL TL
Sbjct: 67 ELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITL 126
Query: 166 ILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQ--SLRVVSLSANHLSGE 223
L N + L+ L L L NN + L SL+ + LS+N +
Sbjct: 127 DLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEF 186
Query: 224 IPD-LRNLKNLRVFDVQDNYFGPRFPRL------HKKMVTLVLRNNRFQFGLNPDELRS- 275
P + L + + GP + + L L N++ +
Sbjct: 187 SPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLS-TTSNTTFLGL 245
Query: 276 -YNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSS 334
+ L LD+S N S LP + Y + N + L ++ + +++L
Sbjct: 246 KWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKR 305
Query: 335 NLLTGYLPSC 344
+ +
Sbjct: 306 SFTKQSISLA 315
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 139 bits (352), Expect = 2e-34
Identities = 55/283 (19%), Positives = 97/283 (34%), Gaps = 30/283 (10%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAH-- 134
L L + NN + L + + +S++ LSL + L +
Sbjct: 196 RLFGLFL---NNVQLGPSLTEKLCLEL------ANTSIRNLSLSNSQLSTTSNTTFLGLK 246
Query: 135 SSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNN 194
++L +L+LS N L+ + L L+ L+ N L L + L+LK +
Sbjct: 247 WTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRS 306
Query: 195 ---------SLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFG 244
SL S L+ L +++ N + G + L NL+ + +++
Sbjct: 307 FTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTS 366
Query: 245 PRFPRL-------HKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSL 297
R H + L L N+ + D L+ LD+ LN
Sbjct: 367 LRTLTNETFVSLAHSPLHILNLTKNKI-SKIESDAFSWLGHLEVLDLGLNEIGQELTGQE 425
Query: 298 LS-LPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTG 339
L +I + + NK L + + P L + L L
Sbjct: 426 WRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKN 468
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 138 bits (350), Expect = 3e-34
Identities = 48/250 (19%), Positives = 88/250 (35%), Gaps = 14/250 (5%)
Query: 109 GSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILD 168
+++ VL+L L + S L L++ N +S P L L+ L L
Sbjct: 22 DLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQ 81
Query: 169 DNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-L 227
N+ + + L+ L L +NS+ ++L + LS N LS
Sbjct: 82 HNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQ 141
Query: 228 RNLKNLRVFDVQDNYF-----GPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKL 282
L+NL+ + +N + + L L +N+ + +P + +L L
Sbjct: 142 VQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIK-EFSPGCFHAIGRLFGL 200
Query: 283 DISLNRFVGPFIPSL---LSLPSITYLDIHGNKLTGL---LLQNMSCNPQLAFVDLSSNL 336
++ + L L+ SI L + ++L+ + L +DLS N
Sbjct: 201 FLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGL-KWTNLTMLDLSYNN 259
Query: 337 LTGYLPSCLQ 346
L
Sbjct: 260 LNVVGNDSFA 269
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 134 bits (340), Expect = 6e-33
Identities = 62/326 (19%), Positives = 110/326 (33%), Gaps = 30/326 (9%)
Query: 51 SFNTTTVTDFCNIEPTPSLTLVCYEDNLTQLHIAGDNNNNINGG------------LAHN 98
+N ++ ++ + + + T+ I+ + I+ + N
Sbjct: 280 EYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDN 339
Query: 99 FSTDTFFSTLGSLSSLKVLSL----VSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPV 154
+ L +LK LSL SL S L ILNL+ N +S
Sbjct: 340 DIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESD 399
Query: 155 QISSLRNLQTLILDDNKFTGAVP-SELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVV 213
S L +L+ L L N+ + E L+ + + L N S + SL+ +
Sbjct: 400 AFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRL 459
Query: 214 SLSANHLSG--EIPD-LRNLKNLRVFDVQDNYFG---PRFPRLHKKMVTLVLRNNRFQF- 266
L L P + L+NL + D+ +N +K+ L L++N
Sbjct: 460 MLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARL 519
Query: 267 ------GLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQN 320
G L+ + L L++ N F + L + +D+ N L L
Sbjct: 520 WKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASV 579
Query: 321 MSCNPQLAFVDLSSNLLTGYLPSCLQ 346
+ L ++L NL+T
Sbjct: 580 FNNQVSLKSLNLQKNLITSVEKKVFG 605
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 2e-32
Identities = 49/261 (18%), Positives = 87/261 (33%), Gaps = 21/261 (8%)
Query: 106 STLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTL 165
T ++L L L+S + +L L+LS N LS + L NLQ L
Sbjct: 91 KTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQEL 150
Query: 166 ILDDNKFTGAVPSELSLLQ--VLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGE 223
+L +NK EL + L L L +N + F P + L + L+ L
Sbjct: 151 LLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPS 210
Query: 224 IPD----LRNLKNLRVFDVQDNYF-----GPRFPRLHKKMVTLVLRNNRFQFGLNPDELR 274
+ + ++R + ++ + L L N + D
Sbjct: 211 LTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLN-VVGNDSFA 269
Query: 275 SYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGN---------KLTGLLLQNMSCNP 325
QL+ + N F SL L ++ YL++ + L + +
Sbjct: 270 WLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLK 329
Query: 326 QLAFVDLSSNLLTGYLPSCLQ 346
L +++ N + G +
Sbjct: 330 CLEHLNMEDNDIPGIKSNMFT 350
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 4e-27
Identities = 56/272 (20%), Positives = 98/272 (36%), Gaps = 26/272 (9%)
Query: 95 LAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGS-IAHSSSLEILNLSSNYLSGSIP 153
L N + L L+VL L + L G ++ + LS N
Sbjct: 388 LTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTR 447
Query: 154 VQISSLRNLQTLILDDNKFTG--AVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLR 211
+ + +LQ L+L + PS L+ L++L L NN+++ L GL+ L
Sbjct: 448 NSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLE 507
Query: 212 VVSLSANHLS---------GEIPDLRNLKNLRVFDVQDNYF---GPR-FPRLHKKMVTLV 258
++ L N+L+ G I L+ L +L + +++ N F F L + + +
Sbjct: 508 ILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFE-LKIID 566
Query: 259 LRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLL--SLPSITYLDIHGNKLTG- 315
L N L + L+ L++ N + + ++T LD+ N
Sbjct: 567 LGLNNLN-TLPASVFNNQVSLKSLNLQKNLITS-VEKKVFGPAFRNLTELDMRFNPFDCT 624
Query: 316 ----LLLQNMSCNPQLAFVDLSSNLLTGYLPS 343
N +LSS+ L P
Sbjct: 625 CESIAWFVNWINETHTNIPELSSHYLCNTPPH 656
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 4e-26
Identities = 45/215 (20%), Positives = 79/215 (36%), Gaps = 28/215 (13%)
Query: 135 SSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNN 194
+ S E+ + S L+ +P + N+ L L N+ + + L+ L + N
Sbjct: 3 TVSHEVADCSHLKLT-QVPDDL--PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFN 59
Query: 195 SLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRLHKK 253
++S P L L+V++L N LS NL
Sbjct: 60 TISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLT------------------- 100
Query: 254 MVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKL 313
L L +N Q + + L LD+S N + + + L ++ L + NK+
Sbjct: 101 --ELHLMSNSIQ-KIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKI 157
Query: 314 TGLLLQNMS--CNPQLAFVDLSSNLLTGYLPSCLQ 346
L + + N L ++LSSN + + P C
Sbjct: 158 QALKSEELDIFANSSLKKLELSSNQIKEFSPGCFH 192
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 92.8 bits (231), Expect = 1e-19
Identities = 36/177 (20%), Positives = 64/177 (36%), Gaps = 20/177 (11%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSS 136
+L +L + + D+ S L +L +L L + + +
Sbjct: 455 SLQRLMLR---RVALKNV-------DSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLE 504
Query: 137 SLEILNLSSNYLS--------GSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSV 188
LEIL+L N L+ G + L +L L L+ N F L L +
Sbjct: 505 KLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKI 564
Query: 189 LSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDL--RNLKNLRVFDVQDNYF 243
+ L N+L+ SL+ ++L N ++ + +NL D++ N F
Sbjct: 565 IDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPF 621
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 3e-16
Identities = 36/182 (19%), Positives = 59/182 (32%), Gaps = 27/182 (14%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVL--------SLVSLGLWGPL 128
NLT L + +NNNI N + D L L++L L G
Sbjct: 481 NLTILDL---SNNNI-----ANINDDML----EGLEKLEILDLQHNNLARLWKHANPGGP 528
Query: 129 PGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSV 188
+ S L ILNL SN L L+ + L N S + L
Sbjct: 529 IYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKS 588
Query: 189 LSLKNNSLSGFLPVSL-TGLQSLRVVSLSANHLSGEIPDLR------NLKNLRVFDVQDN 241
L+L+ N ++ ++L + + N + N + + ++ +
Sbjct: 589 LNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSH 648
Query: 242 YF 243
Y
Sbjct: 649 YL 650
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 1e-07
Identities = 26/127 (20%), Positives = 40/127 (31%), Gaps = 6/127 (4%)
Query: 95 LAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPV 154
L N + L LK++ L L + SL+ LNL N ++
Sbjct: 543 LESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKK 602
Query: 155 QIS-SLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSG----FLPVSLTGLQS 209
+ RNL L + N F S + ++ LS P G
Sbjct: 603 VFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTPPHYHG-FP 661
Query: 210 LRVVSLS 216
+R+ S
Sbjct: 662 VRLFDTS 668
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 1e-32
Identities = 60/274 (21%), Positives = 90/274 (32%), Gaps = 26/274 (9%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSS 136
+L + I + + N G H + F +L + L G S
Sbjct: 288 SLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLP 347
Query: 137 SLEILNLSSNYLS--GSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNN 194
SLE L+LS N LS G +L+ L L N + S L+ L L +++
Sbjct: 348 SLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHS 406
Query: 195 SLSGFLPVS-LTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRLHK 252
+L S L++L + +S H L +L V
Sbjct: 407 NLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEV----------------- 449
Query: 253 KMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNK 312
L + N FQ PD L LD+S + + SL S+ L++ N
Sbjct: 450 ----LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNN 505
Query: 313 LTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQ 346
L C L +D S N + LQ
Sbjct: 506 FFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQ 539
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 2e-30
Identities = 54/283 (19%), Positives = 98/283 (34%), Gaps = 29/283 (10%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSS 136
+ L ++ N + +++F S L+VL L + G+ S
Sbjct: 29 STKNLDLS---FNPLRHLGSYSFF---------SFPELQVLDLSRCEIQTIEDGAYQSLS 76
Query: 137 SLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSL 196
L L L+ N + S L +LQ L+ + + L+ L L++ +N +
Sbjct: 77 HLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLI 136
Query: 197 SGF-LPVSLTGLQSLRVVSLSANHLSGEIP-DLRNLKNLRVF----DVQDNYFGPRFPRL 250
F LP + L +L + LS+N + DLR L + + D+ N P
Sbjct: 137 QSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGA 196
Query: 251 --HKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVG------PFIPSLLSLPS 302
++ L LRNN + ++ L+ + L F +L L +
Sbjct: 197 FKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCN 256
Query: 303 ITYLDIHGNKLTGLLLQN---MSCNPQLAFVDLSSNLLTGYLP 342
+T + L L +C ++ L S +
Sbjct: 257 LTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKD 299
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 8e-30
Identities = 46/217 (21%), Positives = 74/217 (34%), Gaps = 14/217 (6%)
Query: 135 SSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNN 194
S + L+LS N L S LQ L L + L LS L L N
Sbjct: 27 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGN 86
Query: 195 SLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYF-----GPRFP 248
+ + +GL SL+ + +L+ + +LK L+ +V N F
Sbjct: 87 PIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFS 146
Query: 249 RLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQ----KLDISLNRFVGPFIPSLLSLPSIT 304
L + L L +N+ Q + +LR +Q+ LD+SLN P +
Sbjct: 147 NL-TNLEHLDLSSNKIQ-SIYCTDLRVLHQMPLLNLSLDLSLNPMNF-IQPGAFKEIRLH 203
Query: 305 YLDIHGNKLTGLLLQNMSCN-PQLAFVDLSSNLLTGY 340
L + N + +++ L L
Sbjct: 204 KLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNE 240
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 122 bits (307), Expect = 4e-29
Identities = 53/259 (20%), Positives = 83/259 (32%), Gaps = 26/259 (10%)
Query: 77 NLTQLHIAGDNNNNING----------GLAHNFSTDTFFSTLGSLSSLKVLSLV--SLGL 124
L + N L + + L SL+ L L L
Sbjct: 305 GWQHLEL---VNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSF 361
Query: 125 WGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVP-SELSLL 183
G S ++SL+ L+LS N + + L L+ L + S L
Sbjct: 362 KGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSL 420
Query: 184 QVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD--LRNLKNLRVFDVQDN 241
+ L L + + GL SL V+ ++ N L+NL D+
Sbjct: 421 RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQC 480
Query: 242 YF----GPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSL 297
F L + L + +N F L+ + N LQ LD SLN + L
Sbjct: 481 QLEQLSPTAFNSLSS-LQVLNMSHNNFF-SLDTFPYKCLNSLQVLDYSLNHIMTSKKQEL 538
Query: 298 LSLP-SITYLDIHGNKLTG 315
P S+ +L++ N
Sbjct: 539 QHFPSSLAFLNLTQNDFAC 557
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 2e-22
Identities = 61/305 (20%), Positives = 104/305 (34%), Gaps = 37/305 (12%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSS 136
L +L++A +N I +L++L+ L L S + +
Sbjct: 125 TLKELNVA---HNLIQSFKLP--------EYFSNLTNLEHLDLSSNKIQSIYCTDLRVLH 173
Query: 137 SLEI----LNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSL-LQVLSVLSL 191
+ + L+LS N ++ P + L L L +N + V L L V L
Sbjct: 174 QMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRL 232
Query: 192 KNNSLSGFLPV------SLTGLQSLRVVSLSANHLS---GEIPDL-RNLKNLRVFDVQDN 241
+ +L GL +L + +L +I DL L N+ F +
Sbjct: 233 VLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSV 292
Query: 242 YFGPRFPR-LHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSL 300
+ L L N +F +L+S +L S + L
Sbjct: 293 TIERVKDFSYNFGWQHLELVNCKFG-QFPTLKLKSLKRLTFTSNKGGN-----AFSEVDL 346
Query: 301 PSITYLDIHGNKLT--GLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSK 358
PS+ +LD+ N L+ G Q+ L ++DLS N + + L +E L
Sbjct: 347 PSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDF-QH 405
Query: 359 NCLSN 363
+ L
Sbjct: 406 SNLKQ 410
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 91.2 bits (227), Expect = 3e-19
Identities = 39/172 (22%), Positives = 58/172 (33%), Gaps = 17/172 (9%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPL-PGSIAHS 135
NL L I ++ + F LSSL+VL + P
Sbjct: 422 NLIYLDI---SHTHTRVAFNGIF---------NGLSSLEVLKMAGNSFQENFLPDIFTEL 469
Query: 136 SSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNS 195
+L L+LS L P +SL +LQ L + N F L L VL N
Sbjct: 470 RNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNH 529
Query: 196 LSGFLPVSLTGL-QSLRVVSLSANHLSGEIPD---LRNLKNLRVFDVQDNYF 243
+ L SL ++L+ N + L+ +K+ R V+
Sbjct: 530 IMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERM 581
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 80.8 bits (200), Expect = 5e-16
Identities = 32/165 (19%), Positives = 55/165 (33%), Gaps = 16/165 (9%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSS 136
+L L +A N+ + L +L L L L P + S
Sbjct: 446 SLEVLKMA---GNSFQENFLPDI--------FTELRNLTFLDLSQCQLEQLSPTAFNSLS 494
Query: 137 SLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSEL-SLLQVLSVLSLKNNS 195
SL++LN+S N L +LQ L N + EL L+ L+L N
Sbjct: 495 SLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQND 554
Query: 196 LSGFLPVS--LTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDV 238
+ L ++ R + + + P + + + V +
Sbjct: 555 FACTCEHQSFLQWIKDQRQLLVEVERMECATPS--DKQGMPVLSL 597
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 7e-09
Identities = 20/91 (21%), Positives = 31/91 (34%), Gaps = 1/91 (1%)
Query: 256 TLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTG 315
L L N + L S+ +LQ LD+S + SL ++ L + GN +
Sbjct: 32 NLDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQS 90
Query: 316 LLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQ 346
L L S L + L +
Sbjct: 91 LALGAFSGLSSLQKLVAVETNLASLENFPIG 121
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 2e-32
Identities = 45/355 (12%), Positives = 112/355 (31%), Gaps = 47/355 (13%)
Query: 16 LSIIVSAPHSNQLQLFQYQTLVRIQQLLNYPSVSSSFNTTTVTDFCNIEPTPSLTLVCYE 75
L+ +S +++++ + + Q LN + + ++P + +
Sbjct: 371 LTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDA----INRNPEMKPIKKDSRI--- 423
Query: 76 DNLTQLHIAGDNNNNING--------------GLAHNFSTDTFFSTLGSLSSLKVLSLVS 121
+L I G+ N I A++ F+ + +
Sbjct: 424 -SLKDTQI-GNLTNRITFISKAIQRLTKLQIIYFANSP-----FTYDNIAVDWEDANSDY 476
Query: 122 LGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTG------- 174
+ S ++ L + L + +P + L LQ+L + N+
Sbjct: 477 AKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKAD 536
Query: 175 --AVPSELSLLQVLSVLSLKNNSLSGF-LPVSLTGLQSLRVVSLSANHLSGEIPDLRNLK 231
+ + + + + N+L F SL + L ++ N + +
Sbjct: 537 WTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLDCVHNKVR-HLEAFGTNV 595
Query: 232 NLRVFDVQDNYFG---PRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNR 288
L + N F ++ L +N+ ++ N +S + +D S N+
Sbjct: 596 KLTDLKLDYNQIEEIPEDFCAFTDQVEGLGFSHNKLKYIPNIFNAKSVYVMGSVDFSYNK 655
Query: 289 FVG-----PFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLT 338
+ + + + N++ + + ++ + LS+NL+T
Sbjct: 656 IGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT 710
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 111 bits (278), Expect = 3e-25
Identities = 59/313 (18%), Positives = 107/313 (34%), Gaps = 53/313 (16%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSI-AHS 135
L L +N + G+ L L L + +P A +
Sbjct: 574 KLGLLDC---VHNKV-----------RHLEAFGTNVKLTDLKLDYNQIEE-IPEDFCAFT 618
Query: 136 SSLEILNLSSNYLSGSIP--VQISSLRNLQTLILDDNKFTGAVPSELSLLQV-----LSV 188
+E L S N L IP S+ + ++ NK + + S
Sbjct: 619 DQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINAST 677
Query: 189 LSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD---------LRNLKNLRVFDVQ 239
++L N + F + + LS N ++ IP+ +N L D++
Sbjct: 678 VTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLR 736
Query: 240 DNYF-----GPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISL------NR 288
N R L + + + N F P + + +QL+ I NR
Sbjct: 737 FNKLTSLSDDFRATTL-PYLSNMDVSYNCFS-SF-PTQPLNSSQLKAFGIRHQRDAEGNR 793
Query: 289 FVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSN-LLTGYLPS-CLQ 346
+ + + + PS+ L I N + + + PQL +D++ N ++ + S C
Sbjct: 794 ILRQWPTGITTCPSLIQLQIGSNDIRKVDEKLT---PQLYILDIADNPNISIDVTSVCPY 850
Query: 347 VEAKTRLVLYSKN 359
+EA ++LY K
Sbjct: 851 IEAGMYVLLYDKT 863
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 4e-24
Identities = 38/266 (14%), Positives = 82/266 (30%), Gaps = 20/266 (7%)
Query: 90 NINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLS 149
N N + D L + + LSL G G +P +I + L++L+ ++ +
Sbjct: 301 NWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSET 360
Query: 150 GSIPVQIS-------SLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPV 202
S + S + + K L+L +L +N +
Sbjct: 361 VSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKD 420
Query: 203 SLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNN 262
S L+ ++ +L+ N ++ ++ L L++ ++ F
Sbjct: 421 SRISLKDTQIGNLT-NRITFISKAIQRLTKLQIIYFANSPF-TYDNIAVDWEDANSDYAK 478
Query: 263 RFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMS 322
Q+ + L +++ + L LP + L+I N+
Sbjct: 479 --QYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKAD 536
Query: 323 CN---------PQLAFVDLSSNLLTG 339
P++ + N L
Sbjct: 537 WTRLADDEDTGPKIQIFYMGYNNLEE 562
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 90.7 bits (225), Expect = 8e-19
Identities = 36/230 (15%), Positives = 70/230 (30%), Gaps = 28/230 (12%)
Query: 108 LGSLSSLKVLSL-----VSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNL 162
S+ + + S G + + LS N + ++ +
Sbjct: 640 AKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPI 699
Query: 163 QTLILDDNKFT-------GAVPSELSLLQVLSVLSLKNNSLSGFLP-VSLTGLQSLRVVS 214
T+IL +N T +L+ + L+ N L+ T L L +
Sbjct: 700 STIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLTSLSDDFRATTLPYLSNMD 759
Query: 215 LSANHLSGEIPD-LRNLKNLRVFDVQDNYFG---------PRFPRLHKKMVTLVLRNNRF 264
+S N S P N L+ F ++ P ++ L + +N
Sbjct: 760 VSYNCFS-SFPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI 818
Query: 265 QFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLT 314
+ ++ QL LDI+ N + + S+ + +K
Sbjct: 819 R-KVDEKLT---PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQ 864
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 89.2 bits (221), Expect = 2e-18
Identities = 30/189 (15%), Positives = 66/189 (34%), Gaps = 24/189 (12%)
Query: 95 LAHNFSTDTFFSTLGSLSSLKVLSL-------VSLGLWGPLPGSIAHSSSLEILNLSSNY 147
L++N + S + + L + P G+ ++ L ++L N
Sbjct: 680 LSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNK 739
Query: 148 LSGSIPVQI--SSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL------KNNSLSGF 199
L+ S+ ++L L + + N F+ P++ L + + N +
Sbjct: 740 LT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQ 797
Query: 200 LPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYF-----GPRFPRLHKKM 254
P +T SL + + +N + ++ + L + D+ DN P + M
Sbjct: 798 WPTGITTCPSLIQLQIGSNDIR-KVDEK-LTPQLYILDIADNPNISIDVTSVCPYIEAGM 855
Query: 255 VTLVLRNNR 263
L+ +
Sbjct: 856 YVLLYDKTQ 864
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 81.1 bits (200), Expect = 7e-16
Identities = 31/263 (11%), Positives = 74/263 (28%), Gaps = 28/263 (10%)
Query: 111 LSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDN 170
+ + L + + + HS + N + V + + + L L
Sbjct: 275 KAIWEALDGKNWRYYSGTINNTIHSLNWN-FNKELDMWGDQPGVDLDNNGRVTGLSLAGF 333
Query: 171 KFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD--LR 228
G VP + L L VLS +S + + + + + + L
Sbjct: 334 GAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLD 393
Query: 229 NLKNLRVFDVQDNYF------GPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKL 282
+ L + D+ + P + + N + ++ +LQ +
Sbjct: 394 YDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQII 453
Query: 283 DISLNRFVGP-------------------FIPSLLSLPSITYLDIHGNKLTGLLLQNMSC 323
+ + F S +L +T ++++ L +
Sbjct: 454 YFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYD 513
Query: 324 NPQLAFVDLSSNLLTGYLPSCLQ 346
P+L ++++ N
Sbjct: 514 LPELQSLNIACNRGISAAQLKAD 536
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 51.8 bits (124), Expect = 8e-07
Identities = 19/138 (13%), Positives = 41/138 (29%), Gaps = 22/138 (15%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSL------GLWGPLPG 130
L+ + ++ N + +F + + S LK + + P
Sbjct: 754 YLSNMDVS---YNCFS----------SFPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPT 800
Query: 131 SIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLS 190
I SL L + SN + + ++ L L + DN + + +
Sbjct: 801 GITTCPSLIQLQIGSNDIR-KVDEKL--TPQLYILDIADNPNISIDVTSVCPYIEAGMYV 857
Query: 191 LKNNSLSGFLPVSLTGLQ 208
L + G++
Sbjct: 858 LLYDKTQDIRGCDALGIE 875
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 2e-30
Identities = 46/321 (14%), Positives = 112/321 (34%), Gaps = 44/321 (13%)
Query: 470 FTLDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIEL 529
+ L + G ++K +L VA++ + K S Y +
Sbjct: 14 LGTENLYFQSMPLQLLEVKARGRFGCVWKAQL-LNEYVAVKIFPIQDKQS-WQNEYEVYS 71
Query: 530 ISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAA 589
+ ++H N++ +G + D + +I + +L F+ ++W +
Sbjct: 72 LPGMKHENILQFIGAEKRGTSVDVDLWLIT---AFHEKGSLSDFLKAN--VVSWNELCHI 126
Query: 590 AIAIVKGVQFLHTGIVPGVFSNNLKI-------TDVLLDENFHVKINSYNLPLLAEARGK 642
A + +G+ +LH I + I +VLL N I + L A
Sbjct: 127 AETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL-----ALKF 181
Query: 643 GSAEVSSPAK--------------KTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSEN 688
+ + + + ++ + + + D+Y +G++L E+
Sbjct: 182 EAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGP 241
Query: 689 V---VVLVKDLLQVNIGTDEARKSIV----DPAVMNEC-SDESLKRMMELCLRCLSNEPK 740
V ++ ++ + + ++ ++ +V P + + + + E C ++ +
Sbjct: 242 VDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAE 301
Query: 741 DRPS---VEDTLWNLQFATQI 758
R S V + + +Q T I
Sbjct: 302 ARLSAGCVGERITQMQRLTNI 322
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 9e-28
Identities = 54/256 (21%), Positives = 96/256 (37%), Gaps = 13/256 (5%)
Query: 95 LAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPL-PGSIAHSSSLEILNLSSNYL--SGS 151
L+ N + + + SL LS+ L G + + +L L+LS + + S
Sbjct: 308 LSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDC 367
Query: 152 IPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVS-LTGLQSL 210
+Q+ +L +LQ+L L N+ L +L L L S L L
Sbjct: 368 CNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLL 427
Query: 211 RVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYF------GPRFPRLHKKMVTLVLRNNR 263
+V++LS + L L L+ ++Q N+F + ++ LVL
Sbjct: 428 KVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCD 487
Query: 264 FQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSC 323
++ S + +D+S NR LS YL++ N ++ +L +
Sbjct: 488 LS-SIDQHAFTSLKMMNHVDLSHNRLTS-SSIEALSHLKGIYLNLASNHISIILPSLLPI 545
Query: 324 NPQLAFVDLSSNLLTG 339
Q ++L N L
Sbjct: 546 LSQQRTINLRQNPLDC 561
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 1e-27
Identities = 56/285 (19%), Positives = 101/285 (35%), Gaps = 16/285 (5%)
Query: 95 LAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPV 154
L ++ + +T S L+ L L + L LP + S+L+ L LS+N +
Sbjct: 261 LQKHYFFNISSNTFHCFSGLQELDLTATHL-SELPSGLVGLSTLKKLVLSANKFENLCQI 319
Query: 155 QISSLRNLQTLILDDNKFTGAVPSE-LSLLQVLSVLSLKNNSL--SGFLPVSLTGLQSLR 211
S+ +L L + N + + L L+ L L L ++ + S + L L L+
Sbjct: 320 SASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQ 379
Query: 212 VVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYF----GPRFPRLHKKMVTLVLRNNRFQF 266
++LS N + + L + D+ + + L L ++
Sbjct: 380 SLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLD- 438
Query: 267 GLNPDELRSYNQLQKLDISLNRFVGPF---IPSLLSLPSITYLDIHGNKLTGLLLQNMSC 323
+ LQ L++ N F SL +L + L + L+ + +
Sbjct: 439 ISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTS 498
Query: 324 NPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLY-SKNCLSNEEQE 367
+ VDLS N LT L + L + N +S
Sbjct: 499 LKMMNHVDLSHNRLTSSSIEALS--HLKGIYLNLASNHISIILPS 541
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 9e-27
Identities = 37/260 (14%), Positives = 81/260 (31%), Gaps = 9/260 (3%)
Query: 95 LAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPV 154
L T S L L L + L +++ +L+ L +S +
Sbjct: 64 LTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFI 123
Query: 155 QISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVS 214
+ + + L++L L N + + + L VL +NN++ ++ LQ +S
Sbjct: 124 PLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLS 183
Query: 215 L--SANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHK-----KMVTLVLRNNRF-QF 266
L + N ++G P + + + + K + +
Sbjct: 184 LNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDI 243
Query: 267 GLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQ 326
E ++ +++ + F + + LD+ L+ L +
Sbjct: 244 SPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLSE-LPSGLVGLST 302
Query: 327 LAFVDLSSNLLTGYLPSCLQ 346
L + LS+N
Sbjct: 303 LKKLVLSANKFENLCQISAS 322
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 2e-26
Identities = 50/260 (19%), Positives = 97/260 (37%), Gaps = 15/260 (5%)
Query: 95 LAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPV 154
L N + L +LK L + G+ + + +LE L L SN++S
Sbjct: 88 LTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLP 147
Query: 155 QISSLRNLQTLILDDNKFTGAVPSELSLLQVLSV--LSLKNNSLSGFLPVSLTGLQSLRV 212
+ L+ L +N ++S LQ + L+L N ++G + +
Sbjct: 148 KGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAG-IEPGAFDSAVFQS 206
Query: 213 VSLSANHLSGEIPD------LRNLKNLRVFDVQDNYFGPRFPRLHKKM--VTLVLRNNRF 264
++ I +++L D+ D P +M ++ L+ + F
Sbjct: 207 LNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYF 266
Query: 265 QFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLS-LPSITYLDIHGNKLTGLLLQNMSC 323
F ++ + ++ LQ+LD++ +PS L L ++ L + NK L + S
Sbjct: 267 -FNISSNTFHCFSGLQELDLTATHLSE--LPSGLVGLSTLKKLVLSANKFENLCQISASN 323
Query: 324 NPQLAFVDLSSNLLTGYLPS 343
P L + + N L +
Sbjct: 324 FPSLTHLSIKGNTKRLELGT 343
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 3e-26
Identities = 38/246 (15%), Positives = 75/246 (30%), Gaps = 12/246 (4%)
Query: 111 LSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDN 170
+S + L L + + +L L+L+ + S L TL+L N
Sbjct: 32 PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTAN 91
Query: 171 KFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRN 229
+ LS + L L +S + L ++L + L +NH+S
Sbjct: 92 PLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFP 151
Query: 230 LKNLRVFDVQDNYF----GPRFPRLHK-KMVTLVLRNNRFQFGLNPDELRSYNQLQKLDI 284
+ L+V D Q+N L + ++L L N Q L+
Sbjct: 152 TEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGI--EPGAFDSAVFQSLNF 209
Query: 285 SLNRFVGPFIPSL--LSLPSITYLDIHGNKLTGL--LLQNMSCNPQLAFVDLSSNLLTGY 340
+ + L ++ S+ + + C + ++L +
Sbjct: 210 GGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNI 269
Query: 341 LPSCLQ 346
+
Sbjct: 270 SSNTFH 275
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 95.1 bits (237), Expect = 2e-20
Identities = 57/269 (21%), Positives = 93/269 (34%), Gaps = 48/269 (17%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWG-PLPGSIAHS 135
+L L++ + N + T+ F L++L L L +
Sbjct: 377 HLQSLNL---SYNEPL-----SLKTEAF----KECPQLELLDLAFTRLKVKDAQSPFQNL 424
Query: 136 SSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLS---VLSLK 192
L++LNLS + L S L LQ L L N F + + LQ L +L L
Sbjct: 425 HLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLS 484
Query: 193 NNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRLH 251
LS + T L+ + V LS N L+ + L +LK +
Sbjct: 485 FCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI------------------ 526
Query: 252 KKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGN 311
L L +N + P L +Q + +++ N S + + + +
Sbjct: 527 ----YLNLASNHIS-IILPSLLPILSQQRTINLRQNPLDC--TCSNIYF--LEWYKENMQ 577
Query: 312 KLTGLLLQNMSCN--PQLAFVDLSSNLLT 338
KL ++ C P L V LS L+
Sbjct: 578 KLED--TEDTLCENPPLLRGVRLSDVTLS 604
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 82.0 bits (203), Expect = 3e-16
Identities = 27/192 (14%), Positives = 56/192 (29%), Gaps = 14/192 (7%)
Query: 163 QTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSG 222
+T ++ +P L L N L + + L +L + L+ +
Sbjct: 15 KTYNCENLGLN-EIPGTLPNS--TECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYW 71
Query: 223 EIPD-LRNLKNLRVFDVQDNYF----GPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYN 277
D ++ L + N K + L ++ L +
Sbjct: 72 IHEDTFQSQHRLDTLVLTANPLIFMAETALSGP-KALKHLFFIQTGIS-SIDFIPLHNQK 129
Query: 278 QLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGL---LLQNMSCNPQLAFVDLSS 334
L+ L + N +P + LD N + L + ++ ++L+
Sbjct: 130 TLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQ-QATNLSLNLNG 188
Query: 335 NLLTGYLPSCLQ 346
N + G P
Sbjct: 189 NDIAGIEPGAFD 200
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 6e-27
Identities = 51/324 (15%), Positives = 105/324 (32%), Gaps = 17/324 (5%)
Query: 24 HSNQLQLFQYQTLVRIQQLLNYPSVSSSFNTTTVTDFCNIEPTPSLT-LVCYEDNLTQLH 82
L++F+ + + + ++ D +++ + ++ L
Sbjct: 243 DERNLEIFEPSIMEGLCDV-TIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLE 301
Query: 83 IAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILN 142
+ + + L LK L+L SL L+
Sbjct: 302 DVPKHFKWQSLSIIRCQLKQFPTL---DLPFLKSLTLTMNKGSISF--KKVALPSLSYLD 356
Query: 143 LSSNYLS--GSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFL 200
LS N LS G +L+ L L N + + L+ L L ++++L
Sbjct: 357 LSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVT 415
Query: 201 PVS-LTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYF----GPRFPRLHKKM 254
S L+ L + +S + + L +L + N F +
Sbjct: 416 EFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNL 475
Query: 255 VTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLT 314
L L + + ++ + ++LQ L++S N + L S++ LD N++
Sbjct: 476 TFLDLSKCQLE-QISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE 534
Query: 315 GLLLQNMSCNPQLAFVDLSSNLLT 338
LAF +L++N +
Sbjct: 535 TSKGILQHFPKSLAFFNLTNNSVA 558
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 1e-25
Identities = 45/265 (16%), Positives = 84/265 (31%), Gaps = 23/265 (8%)
Query: 95 LAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSG-SIP 153
L N + L+SL+ L V L I +L+ LN++ N++ +P
Sbjct: 87 LTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLP 146
Query: 154 VQISSLRNLQTLILDDNKFTGAVPSELSLLQVLS----VLSLKNNSLSGFLPVSLTGLQS 209
S+L NL + L N ++L L+ L + N + + G+
Sbjct: 147 AYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-K 205
Query: 210 LRVVSLSANHLSGEIPD--LRNLKNLRVFDVQDNYFG----------PRFPRLHKKMVTL 257
L ++L N S I L+NL L V + F L +
Sbjct: 206 LHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDE 265
Query: 258 VLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLL 317
F + + + + ++ ++ + L I +L
Sbjct: 266 FRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIK--YLEDVPKHFKWQSLSIIRCQLKQFP 323
Query: 318 LQNMSCNPQLAFVDLSSNLLTGYLP 342
++ P L + L+ N +
Sbjct: 324 TLDL---PFLKSLTLTMNKGSISFK 345
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 108 bits (273), Expect = 9e-25
Identities = 47/217 (21%), Positives = 73/217 (33%), Gaps = 14/217 (6%)
Query: 135 SSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNN 194
SS + ++LS N L S+ LQ L L + L LS L L N
Sbjct: 31 PSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGN 90
Query: 195 SLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYF-----GPRFP 248
+ F P S +GL SL + L+ + L L+ +V N+ F
Sbjct: 91 PIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFS 150
Query: 249 RLHKKMVTLVLRNNRFQFGLNPDELRS----YNQLQKLDISLNRFVGPFIPSLLSLPSIT 304
L +V + L N Q + ++L+ LD+SLN +
Sbjct: 151 NL-TNLVHVDLSYNYIQ-TITVNDLQFLRENPQVNLSLDMSLNPIDF-IQDQAFQGIKLH 207
Query: 305 YLDIHGNKLTGLLLQNMSCN-PQLAFVDLSSNLLTGY 340
L + GN + +++ N L L
Sbjct: 208 ELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDE 244
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 2e-24
Identities = 52/277 (18%), Positives = 87/277 (31%), Gaps = 16/277 (5%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSS 136
NL LH+ + L ++ L + +
Sbjct: 227 NLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTID-EFRLTYTNDFSDDIVKFHCLA 285
Query: 137 SLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSL 196
++ ++L+ + + Q+L + + +L L+ L+ L N
Sbjct: 286 NVSAMSLAGVSIKY--LEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLT---LTMNKG 340
Query: 197 SGFLPVSLTGLQSLRVVSLSANHLSGEIPD---LRNLKNLRVFDVQDNY---FGPRFPRL 250
S + L SL + LS N LS +LR D+ N F L
Sbjct: 341 S--ISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMSANFMGL 398
Query: 251 HKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHG 310
+++ L +++ + S +L LDIS F L L S+ L + G
Sbjct: 399 -EELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAG 457
Query: 311 NKLTGLLLQNMSCN-PQLAFVDLSSNLLTGYLPSCLQ 346
N L N+ N L F+DLS L
Sbjct: 458 NSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFD 494
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 2e-23
Identities = 43/253 (16%), Positives = 78/253 (30%), Gaps = 20/253 (7%)
Query: 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNK 171
SS K + L L S ++ S L+ L+LS + L +L LIL N
Sbjct: 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNP 91
Query: 172 FTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD--LRN 229
P S L L L L+ + L +L+ ++++ N + N
Sbjct: 92 IQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSN 151
Query: 230 LKNLRVFDVQDNYFG-------PRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKL 282
L NL D+ NY + ++L + N F + + L +L
Sbjct: 152 LTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDF-IQDQAFQGIK-LHEL 209
Query: 283 DISLNRFVGPFIPSLLS-LPSITYLDIHGNKLTGL----LLQNMS----CNPQLAFVDLS 333
+ N + + L L + + + + + C+ + L+
Sbjct: 210 TLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLT 269
Query: 334 SNLLTGYLPSCLQ 346
Sbjct: 270 YTNDFSDDIVKFH 282
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 7e-23
Identities = 52/285 (18%), Positives = 92/285 (32%), Gaps = 18/285 (6%)
Query: 95 LAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPV 154
L+ N + + S L+ L L + + L L L+ N + P
Sbjct: 39 LSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPG 98
Query: 155 QISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGF-LPVSLTGLQSLRVV 213
S L +L+ L+ + K + L L L++ +N + LP + L +L V
Sbjct: 99 SFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHV 158
Query: 214 SLSANHLSGEIP-DLRNLKNLRVF----DVQDNYFG--PRFPRLHKKMVTLVLRNNRFQF 266
LS N++ DL+ L+ D+ N K+ L LR N
Sbjct: 159 DLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSS 218
Query: 267 GLNPDELRSYNQLQKLDISLNRFVG--------PFIPSLLSLPSITYLDIHGNKLTGLLL 318
+ L++ L + L F P I L +I + +
Sbjct: 219 NIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDI 278
Query: 319 QNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSN 363
C ++ + L+ + YL + L + + L
Sbjct: 279 VKFHCLANVSAMSLAGVSIK-YLEDVPKHFKWQSLSI-IRCQLKQ 321
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 2e-19
Identities = 38/271 (14%), Positives = 80/271 (29%), Gaps = 31/271 (11%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSS 136
L +L + N + + + + L + +L ++ P
Sbjct: 205 KLHELTL---RGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDV 261
Query: 137 SLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSL 196
+++ L+ V+ L N+ + L ++ LS+ L
Sbjct: 262 TIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKY--LEDVPKHFKWQSLSIIRCQL 319
Query: 197 SGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVT 256
F + L L+SL +L+ N S L +L D+ N
Sbjct: 320 KQFPTLDLPFLKSL---TLTMNKGSI-SFKKVALPSLSYLDLSRNALS------------ 363
Query: 257 LVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGL 316
+ L+ LD+S N + + + L + +LD + L +
Sbjct: 364 -FSGCCSYSDLGTN-------SLRHLDLSFNGAIIM-SANFMGLEELQHLDFQHSTLKRV 414
Query: 317 LLQNMSCN-PQLAFVDLSSNLLTGYLPSCLQ 346
+ + +L ++D+S
Sbjct: 415 TEFSAFLSLEKLLYLDISYTNTKIDFDGIFL 445
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 80.1 bits (198), Expect = 1e-15
Identities = 41/216 (18%), Positives = 67/216 (31%), Gaps = 28/216 (12%)
Query: 150 GSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQS 209
GS+ I + N+ T D K + VP ++ + L N L S +
Sbjct: 2 GSLNPCIEVVPNI-TYQCMDQKLS-KVPDDIPSS--TKNIDLSFNPLKILKSYSFSNFSE 57
Query: 210 LRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGL 268
L+ + LS + L +L L+L N Q
Sbjct: 58 LQWLDLSRCEIETIEDKAWHGLHHLS---------------------NLILTGNPIQ-SF 95
Query: 269 NPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCN-PQL 327
+P L+ L + + L ++ L++ N + L N L
Sbjct: 96 SPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNL 155
Query: 328 AFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSN 363
VDLS N + + LQ + V S + N
Sbjct: 156 VHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLN 191
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 9e-26
Identities = 57/268 (21%), Positives = 110/268 (41%), Gaps = 30/268 (11%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSS 136
LT L+I N I T S L +L++L+ L L + P +A+ +
Sbjct: 89 KLTNLYI---GTNKI-----------TDISALQNLTNLRELYLNEDNISDISP--LANLT 132
Query: 137 SLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSL 196
+ LNL +N+ + +S++ L L + ++K + ++ L L LSL N +
Sbjct: 133 KMYSLNLGANHNLSDLSP-LSNMTGLNYLTVTESKVKD--VTPIANLTDLYSLSLNYNQI 189
Query: 197 SGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFG--PRFPRLHKKM 254
P L L SL + N ++ I + N+ L + +N L ++
Sbjct: 190 EDISP--LASLTSLHYFTAYVNQITD-ITPVANMTRLNSLKIGNNKITDLSPLANL-SQL 245
Query: 255 VTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLT 314
L + N+ + + ++ +L+ L++ N+ I L +L + L ++ N+L
Sbjct: 246 TWLEIGTNQIS---DINAVKDLTKLKMLNVGSNQISD--ISVLNNLSQLNSLFLNNNQLG 300
Query: 315 GLLLQNMSCNPQLAFVDLSSNLLTGYLP 342
++ + L + LS N +T P
Sbjct: 301 NEDMEVIGGLTNLTTLFLSQNHITDIRP 328
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 6e-24
Identities = 55/272 (20%), Positives = 112/272 (41%), Gaps = 32/272 (11%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSS 136
NL L++ N N I S L +L L L + + + ++ + +
Sbjct: 67 NLEYLNL---NGNQITD-----------ISPLSNLVKLTNLYIGTNKI--TDISALQNLT 110
Query: 137 SLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSL 196
+L L L+ + +S P +++L + +L L N S LS + L+ L++ + +
Sbjct: 111 NLRELYLNEDNISDISP--LANLTKMYSLNLGANHNLS-DLSPLSNMTGLNYLTVTESKV 167
Query: 197 SGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFG--PRFPRLHKKM 254
P + L L +SL+ N + I L +L +L F N + ++
Sbjct: 168 KDVTP--IANLTDLYSLSLNYNQIED-ISPLASLTSLHYFTAYVNQITDITPVANM-TRL 223
Query: 255 VTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLT 314
+L + NN+ + L + +QL L+I N+ I ++ L + L++ N+++
Sbjct: 224 NSLKIGNNKIT---DLSPLANLSQLTWLEIGTNQISD--INAVKDLTKLKMLNVGSNQIS 278
Query: 315 GLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQ 346
+ ++ QL + L++N L +
Sbjct: 279 DI--SVLNNLSQLNSLFLNNNQLGNEDMEVIG 308
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 96.8 bits (242), Expect = 6e-22
Identities = 51/264 (19%), Positives = 99/264 (37%), Gaps = 32/264 (12%)
Query: 78 LTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSS 137
L N I L+ L + + S
Sbjct: 2 AATLATLPAPINQI--------------FPDADLAEGIRAVLQKASVTDVVT--QEELES 45
Query: 138 LEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLS 197
+ L ++ ++ SI I L NL+ L L+ N+ T S LS L L+ L + N ++
Sbjct: 46 ITKLVVAGEKVA-SIQ-GIEYLTNLEYLNLNGNQITD--ISPLSNLVKLTNLYIGTNKIT 101
Query: 198 GFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLH--KKMV 255
L L +LR + L+ +++S I L NL + ++ N+ L +
Sbjct: 102 DISA--LQNLTNLRELYLNEDNISD-ISPLANLTKMYSLNLGANHNLSDLSPLSNMTGLN 158
Query: 256 TLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTG 315
L + ++ + + + + L L ++ N+ I L SL S+ Y + N++T
Sbjct: 159 YLTVTESKVK---DVTPIANLTDLYSLSLNYNQIED--ISPLASLTSLHYFTAYVNQITD 213
Query: 316 LLLQNMSCNPQLAFVDLSSNLLTG 339
+ ++ +L + + +N +T
Sbjct: 214 --ITPVANMTRLNSLKIGNNKITD 235
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 80.3 bits (199), Expect = 2e-16
Identities = 37/165 (22%), Positives = 66/165 (40%), Gaps = 21/165 (12%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSS 136
+L N I + + +++ L L + + + P +A+ S
Sbjct: 200 SLHYFTA---YVNQITD-----------ITPVANMTRLNSLKIGNNKITDLSP--LANLS 243
Query: 137 SLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSL 196
L L + +N +S I + L L+ L + N+ + S L+ L L+ L L NN L
Sbjct: 244 QLTWLEIGTNQIS-DINA-VKDLTKLKMLNVGSNQISD--ISVLNNLSQLNSLFLNNNQL 299
Query: 197 SGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDN 241
+ GL +L + LS NH++ I L +L + D +
Sbjct: 300 GNEDMEVIGGLTNLTTLFLSQNHITD-IRPLASLSKMDSADFANQ 343
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 68.7 bits (169), Expect = 1e-12
Identities = 31/145 (21%), Positives = 56/145 (38%), Gaps = 20/145 (13%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSS 136
L L I NN I S L +LS L L + + + ++ +
Sbjct: 222 RLNSLKI---GNNKITD-----------LSPLANLSQLTWLEIGTNQISDI--NAVKDLT 265
Query: 137 SLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSL 196
L++LN+ SN +S +++L L +L L++N+ + L L+ L L N +
Sbjct: 266 KLKMLNVGSNQISDISV--LNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHI 323
Query: 197 SGFLPVSLTGLQSLRVVSLSANHLS 221
+ P L L + + +
Sbjct: 324 TDIRP--LASLSKMDSADFANQVIK 346
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 5e-05
Identities = 20/133 (15%), Positives = 46/133 (34%), Gaps = 32/133 (24%)
Query: 206 GLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQ 265
G +L L I + +L + + VL+
Sbjct: 1 GAATL-------ATLPAPINQIFPDADL------------------AEGIRAVLQKASVT 35
Query: 266 FGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNP 325
+ + KL ++ + I + L ++ YL+++GN++T + +S
Sbjct: 36 ---DVVTQEELESITKLVVAGEKVAS--IQGIEYLTNLEYLNLNGNQITD--ISPLSNLV 88
Query: 326 QLAFVDLSSNLLT 338
+L + + +N +T
Sbjct: 89 KLTNLYIGTNKIT 101
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 7e-25
Identities = 61/280 (21%), Positives = 116/280 (41%), Gaps = 49/280 (17%)
Query: 492 SHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIE--LISKLRHSNLVSALGHCLDFS 549
S G +YKGK G VA++ L ++ + + + E ++ K RH N++ +G+
Sbjct: 36 SFGTVYKGKW-HGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-- 91
Query: 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVF 609
P ++I+ ++ +L + K + I A +G+ +LH +
Sbjct: 92 ---PQLAIV---TQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA---KSII 142
Query: 610 SNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTS---------VLART 660
+LK ++ L E+ VKI + L A K S ++ S V+
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGL-----ATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 661 EQ---DDKSDVYDIGIILIEIIVGR-P---ITSENVVVLVKDLLQVNIGTDEARKSIVDP 713
+ +SDVY GI+L E++ G+ P I + + ++ + +G +
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEM-------VGRGSLSPDL--S 248
Query: 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
V + C + +KR+M CL + +RPS L ++
Sbjct: 249 KVRSNC-PKRMKRLMA---ECLKKKRDERPSFPRILAEIE 284
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 1e-24
Identities = 53/320 (16%), Positives = 108/320 (33%), Gaps = 24/320 (7%)
Query: 24 HSNQLQLFQYQTLVRIQQLLNYPSVSSSFNTTTVTDFCNIEPTPSLTLVCYEDNLTQLHI 83
L FQ+ L + ++ + T F + L L+++
Sbjct: 204 RDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYIL-----ELSEVEF 258
Query: 84 AGDNNNNINGGLAHNFSTDTFFSTLGSLS--SLKVLSLVSLGLWGPLPGSIAHSSSLEIL 141
++ +NG N S S LG + +++ L + L+ L + ++ +
Sbjct: 259 ---DDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRI 315
Query: 142 NLSSNYLSGSIPVQI-SSLRNLQTLILDDNKFTGAV---PSELSLLQVLSVLSLKNNSLS 197
+ ++ + +P L++L+ L L +N + L L L N L
Sbjct: 316 TVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLR 374
Query: 198 --GFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMV 255
L L++L + +S N + + +R ++ + + +
Sbjct: 375 SMQKTGEILLTLKNLTSLDISRNTFHPMPDSCQWPEKMRFLNLSSTGIRVVKTCIPQTLE 434
Query: 256 TLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTG 315
L + NN L +LQ+L IS N+ +P P + + I N+L
Sbjct: 435 VLDVSNNNLDS--FSLFL---PRLQELYISRNKLK--TLPDASLFPVLLVMKISRNQLKS 487
Query: 316 LLLQNMSCNPQLAFVDLSSN 335
+ L + L +N
Sbjct: 488 VPDGIFDRLTSLQKIWLHTN 507
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 94.4 bits (235), Expect = 3e-20
Identities = 47/270 (17%), Positives = 95/270 (35%), Gaps = 26/270 (9%)
Query: 95 LAHN-FSTDTFFSTLGSLSSLKVLSLVSL-GLWGPLPGSIAHSSSLEILNLSSNYLSGSI 152
L N + T S +L++L+ L + ++ A +SL L + + L
Sbjct: 105 LMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQ 164
Query: 153 PVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGF-----------LP 201
+ S+R++ L L ++ + +L + L L++ +L+ F P
Sbjct: 165 SQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSP 224
Query: 202 VSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFG------PRFPRLHKKMV 255
+ + + S N L + + L + D N G K+
Sbjct: 225 MKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVE 284
Query: 256 TLVLRNNRFQ----FGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGN 311
T+ +R F +++++ + ++ L S+ +LD+ N
Sbjct: 285 TVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSEN 344
Query: 312 KLTGLLLQNMSCN---PQLAFVDLSSNLLT 338
+ L+N +C P L + LS N L
Sbjct: 345 LMVEEYLKNSACKGAWPSLQTLVLSQNHLR 374
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 91.7 bits (228), Expect = 2e-19
Identities = 41/235 (17%), Positives = 81/235 (34%), Gaps = 10/235 (4%)
Query: 110 SLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDD 169
S + V S +P + +++++ L+LS N ++ + + NLQ LIL
Sbjct: 3 SCDASGVCDGRSRSF-TSIPSGL--TAAMKSLDLSFNKITYIGHGDLRACANLQVLILKS 59
Query: 170 NKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD--L 227
++ L L L L +N LS L SL+ ++L N
Sbjct: 60 SRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLF 119
Query: 228 RNLKNLRVFDVQDNYFGPRFPRLH----KKMVTLVLRNNRFQFGLNPDELRSYNQLQKLD 283
NL NL+ + + R+ + L ++ + L+S + L
Sbjct: 120 PNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLR-NYQSQSLKSIRDIHHLT 178
Query: 284 ISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLT 338
+ L+ L S+ YL++ L + + + + + +
Sbjct: 179 LHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGS 233
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 89.8 bits (223), Expect = 7e-19
Identities = 42/256 (16%), Positives = 87/256 (33%), Gaps = 23/256 (8%)
Query: 106 STLGSLSSLKVLSLVSLGLWG-PLPGSIAHSSSLEILNLSSNYLSGSIPVQ-ISSLRNLQ 163
S G LSSLK L+L+ + + ++L+ L + + I + L +L
Sbjct: 92 SWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLN 151
Query: 164 TLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLS-- 221
L + L ++ + L+L + + L + L S+R + L +L+
Sbjct: 152 ELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARF 211
Query: 222 --GEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQF---------GLNP 270
+P ++ + + K++ +L + +F NP
Sbjct: 212 QFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNP 271
Query: 271 DELRSYN--------QLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMS 322
E + +++L I L + + + +K+ +
Sbjct: 272 SESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQ 331
Query: 323 CNPQLAFVDLSSNLLT 338
L F+DLS NL+
Sbjct: 332 HLKSLEFLDLSENLMV 347
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 86.7 bits (215), Expect = 8e-18
Identities = 49/219 (22%), Positives = 88/219 (40%), Gaps = 12/219 (5%)
Query: 136 SSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNS 195
+ + + S + SIP +++ +++L L NK T +L L VL LK++
Sbjct: 5 DASGVCDGRSRSFT-SIPSGLTA--AMKSLDLSFNKITYIGHGDLRACANLQVLILKSSR 61
Query: 196 LSGFLPVSLTGLQSLRVVSLSANHLSGEIPD--LRNLKNLRVFDVQDNYF-----GPRFP 248
++ + L SL + LS NHLS + L +L+ ++ N + FP
Sbjct: 62 INTIEGDAFYSLGSLEHLDLSDNHLS-SLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFP 120
Query: 249 RLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDI 308
L + TL + N + + L +L+I SL S+ I +L +
Sbjct: 121 NL-TNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTL 179
Query: 309 HGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQV 347
H ++ LL + +++L L + S L V
Sbjct: 180 HLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPV 218
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 79.0 bits (195), Expect = 2e-15
Identities = 39/201 (19%), Positives = 66/201 (32%), Gaps = 36/201 (17%)
Query: 95 LAHNFSTDTFFST---LGSLSSLKVLSLVSLGLW--GPLPGSIAHSSSLEILNLSSNYLS 149
L+ N + + G+ SL+ L L L + +L L++S N
Sbjct: 341 LSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH 400
Query: 150 GSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQS 209
+P ++ L L V + + Q L VL + NN+L + L LQ
Sbjct: 401 -PMPDSCQWPEKMRFLNLSSTGIR-VVKTCI--PQTLEVLDVSNNNLD-SFSLFLPRLQE 455
Query: 210 LRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLN 269
L +S N L +PD L V + + N+ + +
Sbjct: 456 L---YISRNKLK-TLPDASLFPVLLV---------------------MKISRNQLKS-VP 489
Query: 270 PDELRSYNQLQKLDISLNRFV 290
LQK+ + N +
Sbjct: 490 DGIFDRLTSLQKIWLHTNPWD 510
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 76.3 bits (188), Expect = 1e-14
Identities = 44/277 (15%), Positives = 94/277 (33%), Gaps = 28/277 (10%)
Query: 95 LAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPV 154
+ + +L S+ + L+L L SS+ L L L+
Sbjct: 155 IKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFS 214
Query: 155 QISSLRNLQTLILDDNKFT-------GAVPSELSLLQVLSVLSLKNNSLSGFLPVS---- 203
+ + + + + L + LS + + +L+G +
Sbjct: 215 PLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSES 274
Query: 204 --LTGLQSLRVVSLSANHLSG----EIPD--LRNLKNLRVFDVQDN---YFGPRFPRLHK 252
++ L + V++ H+ L+ ++ V+++ F + K
Sbjct: 275 DVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLK 334
Query: 253 KMVTLVLRNNRFQFGL--NPDELRSYNQLQKLDISLNRF--VGPFIPSLLSLPSITYLDI 308
+ L L N N ++ LQ L +S N + LL+L ++T LDI
Sbjct: 335 SLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDI 394
Query: 309 HGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCL 345
N + + ++ F++LSS + + +C+
Sbjct: 395 SRNTFHPMP-DSCQWPEKMRFLNLSSTGIR-VVKTCI 429
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 7e-09
Identities = 39/156 (25%), Positives = 59/156 (37%), Gaps = 22/156 (14%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSS 136
NLT L I + N + + ++ L+L S G+ + I
Sbjct: 388 NLTSLDI---SRNTFH----------PMPDSCQWPEKMRFLNLSSTGI-RVVKTCI--PQ 431
Query: 137 SLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSL 196
+LE+L++S+N L S L LQ L + NK +P SL VL V+ + N L
Sbjct: 432 TLEVLDVSNNNLD-SFS---LFLPRLQELYISRNKLK-TLPDA-SLFPVLLVMKISRNQL 485
Query: 197 SGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKN 232
L SL+ + L N P + L
Sbjct: 486 KSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSR 521
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 4e-24
Identities = 66/277 (23%), Positives = 120/277 (43%), Gaps = 46/277 (16%)
Query: 492 SHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYH--IELISKLRHSNLVSALGHCLDFS 549
S G +++ + G+ VA++ L + + + + ++ +LRH N+V +G
Sbjct: 49 SFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ-- 105
Query: 550 LDDPSISIIYLIFEYAPNETLRSFI--SGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPG 607
P++SI+ EY +L + SG +L +R++ A + KG+ +LH P
Sbjct: 106 --PPNLSIV---TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN-RNPP 159
Query: 608 VFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTS-------VLART 660
+ NLK ++L+D+ + VK+ + L +R K S +SS + + VL
Sbjct: 160 IVHRNLKSPNLLVDKKYTVKVCDFGL-----SRLKASTFLSSKSAAGTPEWMAPEVLRDE 214
Query: 661 EQDDKSDVYDIGIILIEIIVGRP----ITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM 716
++KSDVY G+IL E+ + + VV V G R +
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAV--------GFKCKR-----LEIP 261
Query: 717 NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
+ + ++E C +NEP RPS + L+
Sbjct: 262 RNL-NPQVAAIIE---GCWTNEPWKRPSFATIMDLLR 294
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 107 bits (268), Expect = 5e-24
Identities = 69/377 (18%), Positives = 120/377 (31%), Gaps = 39/377 (10%)
Query: 24 HSNQLQLFQYQTLVRIQQLLNYPSVSS---SFNTTTVTDFCNIEPTPSLTLVCYEDNLTQ 80
+N L + + S N TV N S +
Sbjct: 182 AANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHH 241
Query: 81 LHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEI 140
+ AG +NI + +TF + SS++ L L ++ L++
Sbjct: 242 IMGAGFGFHNI-----KDPDQNTFAGL--ARSSVRHLDLSHGFVFSLNSRVFETLKDLKV 294
Query: 141 LNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFL 200
LNL+ N ++ L NLQ L L N S L ++ + L+ N ++
Sbjct: 295 LNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQ 354
Query: 201 PVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNL-----------------RVFDVQDNYF 243
+ L+ L+ + L N L+ I + ++ ++ + + +N
Sbjct: 355 DQTFKFLEKLQTLDLRDNALT-TIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRL 413
Query: 244 G----PRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLS 299
F + L+L NRF L++L + N + L
Sbjct: 414 ENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCW 473
Query: 300 -----LPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLV 354
L + L ++ N L L S L + L+SN LT L L
Sbjct: 474 DVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLT-VLSHNDLPANLEILD 532
Query: 355 LYSKNCLSNEEQEQHPS 371
+ S+N L + S
Sbjct: 533 I-SRNQLLAPNPDVFVS 548
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 86.8 bits (215), Expect = 1e-17
Identities = 43/232 (18%), Positives = 72/232 (31%), Gaps = 31/232 (13%)
Query: 136 SSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSE-LSLLQVLSVLSLKNN 194
++ E L LS NY+ L LQ L L + E L L +L L ++
Sbjct: 24 NTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSS 83
Query: 195 SLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD---LRNLKNLRVFDVQDNYF-----GPR 246
+ P + GL L + L LS + RNLK L D+ N P
Sbjct: 84 KIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPS 143
Query: 247 FPRLHKKMVTLVLRNNRFQFGLNPDELRS--YNQLQKLDISLNRFVG------PFIPSLL 298
F +L + ++ +N+ + EL L ++ N +
Sbjct: 144 FGKL-NSLKSIDFSSNQIFL-VCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPF 201
Query: 299 SLPSITYLDIHGNKLT------------GLLLQNMSCNPQLAFVDLSSNLLT 338
+ LD+ GN T ++ + + +
Sbjct: 202 RNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIK 253
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 86.4 bits (214), Expect = 1e-17
Identities = 40/228 (17%), Positives = 75/228 (32%), Gaps = 21/228 (9%)
Query: 135 SSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNN 194
S I L+ +P L + L+L N S L+ L +L L +
Sbjct: 3 SFDGRIAFYRFCNLT-QVP---QVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQ 58
Query: 195 SLSGFL-PVSLTGLQSLRVVSLSANHLSGEIPD--LRNLKNLRVFDVQDNYF-----GPR 246
+ + L +LR++ L ++ + + + L +L +
Sbjct: 59 YTPLTIDKEAFRNLPNLRILDLGSSKIY-FLHPDAFQGLFHLFELRLYFCGLSDAVLKDG 117
Query: 247 FPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSL--LSLPSIT 304
+ R K + L L N+ + N L+ +D S N+ L L +++
Sbjct: 118 YFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLS 177
Query: 305 YLDIHGNKLTGLL------LQNMSCNPQLAFVDLSSNLLTGYLPSCLQ 346
+ + N L + N N L +D+S N T +
Sbjct: 178 FFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFS 225
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 86.0 bits (213), Expect = 2e-17
Identities = 50/266 (18%), Positives = 83/266 (31%), Gaps = 31/266 (11%)
Query: 111 LSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQI-SSLRNLQTLILDD 169
L++ + L L + S L++L L S Y +I + +L NL+ L L
Sbjct: 23 LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGS 82
Query: 170 NKFTGAVPSELSLLQVLSVLSLKNNSLSGFL--PVSLTGLQSLRVVSLSANHLS--GEIP 225
+K P L L L L LS + L++L + LS N + P
Sbjct: 83 SKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHP 142
Query: 226 DLRNLKNLRVFDVQDNYF----GPRFPRLH-KKMVTLVLRNNRFQFGLNPDELRSYN--- 277
L +L+ D N L K + L N ++ D + N
Sbjct: 143 SFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFR 202
Query: 278 --QLQKLDISLNRFV------------GPFIPSLLSLPSITYLDIHGNKLTGL---LLQN 320
L+ LD+S N + SL+ I + +
Sbjct: 203 NMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAG 262
Query: 321 MSCNPQLAFVDLSSNLLTGYLPSCLQ 346
+ + +DLS + +
Sbjct: 263 L-ARSSVRHLDLSHGFVFSLNSRVFE 287
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 82.9 bits (205), Expect = 2e-16
Identities = 48/289 (16%), Positives = 97/289 (33%), Gaps = 38/289 (13%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWG-PLPGSIAHS 135
+L +L + ++ + + +L +L L L + L S
Sbjct: 98 HLFELRL---YFCGLSDAVLKD-------GYFRNLKALTRLDLSKNQIRSLYLHPSFGKL 147
Query: 136 SSLEILNLSSNYLSGSIPVQISSLR--NLQTLILDDNKFTGAVP-SELSLLQVLSVLSLK 192
+SL+ ++ SSN + ++ L+ L L N V + + L+
Sbjct: 148 NSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLE 207
Query: 193 -----------------NNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLK--N 232
+N++S SL + +++ + L +
Sbjct: 208 ILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSS 267
Query: 233 LRVFDVQDNYF---GPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRF 289
+R D+ + R K + L L N+ + + + LQ L++S N
Sbjct: 268 VRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKIN-KIADEAFYGLDNLQVLNLSYNLL 326
Query: 290 VGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLT 338
+ + LP + Y+D+ N + + Q +L +DL N LT
Sbjct: 327 GELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALT 375
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 81.0 bits (200), Expect = 6e-16
Identities = 52/272 (19%), Positives = 94/272 (34%), Gaps = 20/272 (7%)
Query: 77 NLTQLHIAGDNNNNING--GLAHNFSTDTFFSTLGSLS-SLKVLSLVSLGLWGPLPGSI- 132
L L + + I+ + F + TL ++ + ++ L L
Sbjct: 363 KLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFL 422
Query: 133 AHSSSLEILNLSSNYLSGSIPVQI-SSLRNLQTLILDDNKFTGAVPSELSL-----LQVL 186
L+IL L+ N S Q S +L+ L L +N A +EL L L
Sbjct: 423 LRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHL 482
Query: 187 SVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPR 246
VL L +N L+ P + L +LR +SL++N L+ + NL + D+ N
Sbjct: 483 QVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLT-VLSHNDLPANLEILDISRNQLLAP 541
Query: 247 FPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYL 306
P + + L + +N+F ++ + I+ + +
Sbjct: 542 NPDVFVSLSVLDITHNKFICECELSTFINWLNHTNVTIAGPP---------ADIYCVYPD 592
Query: 307 DIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLT 338
G L L + L + S ++
Sbjct: 593 SFSGVSLFSLSTEGCDEEEVLKSLKFSLFIVC 624
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 6e-24
Identities = 48/301 (15%), Positives = 101/301 (33%), Gaps = 47/301 (15%)
Query: 492 SHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYT--YHIELISKLRHSNLVSALGHCLDFS 549
+G +YKG L D VA+ K+ ++ + +I + + H N+ + +
Sbjct: 25 RYGAVYKGSL-DERPVAV---KVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVT 80
Query: 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVF 609
D L+ EY PN +L ++S WV A ++ +G+ +LHT + G
Sbjct: 81 ADGRME--YLLVMEYYPNGSLXKYLSLH--TSDWVSSCRLAHSVTRGLAYLHTELPRGDH 136
Query: 610 SN------NLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSV------- 656
+L +VL+ + I+ + L + A + V
Sbjct: 137 YKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMA 196
Query: 657 ----------LARTEQDDKSDVYDIGIILIEIIVGRPITS-----ENVVVLVKDLLQVNI 701
+ D+Y +G+I EI + + + + +
Sbjct: 197 PEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHP 256
Query: 702 GTDEARKSIVD----PAVMNECSDES--LKRMMELCLRCLSNEPKDRPS---VEDTLWNL 752
++ + + P + S ++ + E C + + R + E+ + L
Sbjct: 257 TFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAEL 316
Query: 753 Q 753
Sbjct: 317 M 317
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 7e-24
Identities = 64/272 (23%), Positives = 110/272 (40%), Gaps = 34/272 (12%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSS 136
+L QL N + T L +L++L+ L + S + +A +
Sbjct: 157 SLQQLSF----GNQV-----------TDLKPLANLTTLERLDISSNKVSDI--SVLAKLT 199
Query: 137 SLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSL 196
+LE L ++N +S P + L NL L L+ N+ L+ L L+ L L NN +
Sbjct: 200 NLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQI 255
Query: 197 SGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFG--PRFPRLHKKM 254
S P L+GL L + L AN +S I L L L ++ +N L K +
Sbjct: 256 SNLAP--LSGLTKLTELKLGANQISN-ISPLAGLTALTNLELNENQLEDISPISNL-KNL 311
Query: 255 VTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLT 314
L L N + + S +LQ+L N+ + SL +L +I +L N+++
Sbjct: 312 TYLTLYFNNIS---DISPVSSLTKLQRLFFYNNKVSD--VSSLANLTNINWLSAGHNQIS 366
Query: 315 GLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQ 346
L ++ ++ + L+ T +
Sbjct: 367 D--LTPLANLTRITQLGLNDQAWTNAPVNYKA 396
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 98.5 bits (246), Expect = 7e-22
Identities = 58/266 (21%), Positives = 114/266 (42%), Gaps = 34/266 (12%)
Query: 76 DNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHS 135
D +T L + I + L++L ++ + L P + +
Sbjct: 46 DQVTTLQA---DRLGIKS-----------IDGVEYLNNLTQINFSNNQLTDITP--LKNL 89
Query: 136 SSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNS 195
+ L + +++N ++ P +++L NL L L +N+ T L L L+ L L +N+
Sbjct: 90 TKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITD--IDPLKNLTNLNRLELSSNT 145
Query: 196 LSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFG--PRFPRLHKK 253
+S +L+GL SL+ +S ++ L NL L D+ N +L
Sbjct: 146 ISD--ISALSGLTSLQQLSFGNQVT--DLKPLANLTTLERLDISSNKVSDISVLAKL-TN 200
Query: 254 MVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKL 313
+ +L+ NN+ + L L +L ++ N+ I +L SL ++T LD+ N++
Sbjct: 201 LESLIATNNQIS---DITPLGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQI 255
Query: 314 TGLLLQNMSCNPQLAFVDLSSNLLTG 339
+ L +S +L + L +N ++
Sbjct: 256 SN--LAPLSGLTKLTELKLGANQISN 279
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 2e-08
Identities = 30/166 (18%), Positives = 69/166 (41%), Gaps = 9/166 (5%)
Query: 57 VTDFCNIEPTPSLT-LVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLK 115
+++ + +LT L E+ L + + N L N +D S + SL+ L+
Sbjct: 277 ISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISD--ISPVSSLTKLQ 334
Query: 116 VLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGA 175
L + + +A+ +++ L+ N +S P +++L + L L+D +T A
Sbjct: 335 RLFFYNNKVSDVSS--LANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNA 390
Query: 176 VPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLS 221
+ + + + + + +L P +++ S ++ N S
Sbjct: 391 PVNYKANVSIPNTVKNVTGALI--APATISDGGSYTEPDITWNLPS 434
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 7e-24
Identities = 48/277 (17%), Positives = 111/277 (40%), Gaps = 47/277 (16%)
Query: 492 SHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIE--LISKLRHSNLVSALGHCLDFS 549
G+++KG+ G + ++ LK+ S+ ++ E + H N++ LG C
Sbjct: 22 HSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQS-- 78
Query: 550 LDDPSISIIYLIFEYAPNETLRSFI-SGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
P LI + P +L + + G + + Q + A+ + +G+ FLHT + P +
Sbjct: 79 ---PPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT-LEPLI 134
Query: 609 FSNNLKITDVLLDENFHVKINSYNLPLLAEARGK-GSA-----EV--SSPAKKTSVLART 660
+ L V++DE+ +I+ ++ ++ G+ + E P
Sbjct: 135 PRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNR----- 189
Query: 661 EQDDKSDVYDIGIILIEIIVGRP----ITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM 716
+D++ ++L E++ +++ + + V + R +I P
Sbjct: 190 ---RSADMWSFAVLLWELVTREVPFADLSNMEIGMKV--------ALEGLRPTI--P--- 233
Query: 717 NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
+ ++M+ C++ +P RP + + L+
Sbjct: 234 -PGISPHVSKLMK---ICMNEDPAKRPKFDMIVPILE 266
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 1e-23
Identities = 43/212 (20%), Positives = 89/212 (41%), Gaps = 10/212 (4%)
Query: 128 LPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLS 187
+ + + +I ++ + L ++ S N++ L L N + ++L+ L
Sbjct: 2 IHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLE 61
Query: 188 VLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRF 247
+L+L +N L L L L +LR + L+ N++ E+ +++ L +N
Sbjct: 62 LLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQ-ELLVGPSIETL---HAANNNISRVS 115
Query: 248 PRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVG-PFIPSLLSLPSITYL 306
+ + L NN+ L + +++Q LD+ LN F S ++ +L
Sbjct: 116 CSRGQGKKNIYLANNKIT-MLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHL 174
Query: 307 DIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLT 338
++ N + ++ +L +DLSSN L
Sbjct: 175 NLQYNFIYD--VKGQVVFAKLKTLDLSSNKLA 204
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 92.4 bits (230), Expect = 2e-20
Identities = 36/189 (19%), Positives = 70/189 (37%), Gaps = 8/189 (4%)
Query: 151 SIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSL 210
+I + + + D+ A+ S + L L N LS L L
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKL 60
Query: 211 RVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNP 270
+++LS+N L E DL +L LR D+ +NY + TL NN ++
Sbjct: 61 ELLNLSSNVLY-ETLDLESLSTLRTLDLNNNYVQ-ELLVGP-SIETLHAANNNISR-VSC 116
Query: 271 DELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCN-PQLAF 329
+ + + ++ N+ + YLD+ N++ + ++ + L
Sbjct: 117 SRGQG---KKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEH 173
Query: 330 VDLSSNLLT 338
++L N +
Sbjct: 174 LNLQYNFIY 182
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 91.2 bits (227), Expect = 3e-20
Identities = 53/250 (21%), Positives = 98/250 (39%), Gaps = 22/250 (8%)
Query: 95 LAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPV 154
+ + S S ++K L L L +A + LE+LNLSSN L ++
Sbjct: 17 VTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD- 75
Query: 155 QISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVS 214
+ SL L+TL L++N EL + + L NN++S G +++
Sbjct: 76 -LESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNISRVSCSRGQGKKNI---Y 126
Query: 215 LSANHLSGEIPD--LRNLKNLRVFDVQDNYF----GPRFPRLHKKMVTLVLRNNRFQFGL 268
L+ N ++ + D ++ D++ N + L L+ N +
Sbjct: 127 LANNKIT-MLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY-DV 184
Query: 269 NPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLA 328
+ + +L+ LD+S N+ P S +T++ + NKL + + + + L
Sbjct: 185 KGQVVFA--KLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLE 240
Query: 329 FVDLSSNLLT 338
DL N
Sbjct: 241 HFDLRGNGFH 250
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 85.0 bits (211), Expect = 4e-18
Identities = 37/238 (15%), Positives = 80/238 (33%), Gaps = 28/238 (11%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSS 136
L L + NNN + L S++ L + + + S
Sbjct: 81 TLRTLDL---NNNYV--------------QELLVGPSIETLHAANNNI-SRVSCSRG--Q 120
Query: 137 SLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTG-AVPSELSLLQVLSVLSLKNNS 195
+ + L++N ++ + +Q L L N+ + L L+L+ N
Sbjct: 121 GKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNF 180
Query: 196 LSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFG--PRFPRLHKK 253
+ + L+ + LS+N L+ P+ ++ + +++N + R +
Sbjct: 181 IYD-VK-GQVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVLIEKALRFSQN 238
Query: 254 MVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGN 311
+ LR N F G D ++Q + + + ++P L +G
Sbjct: 239 LEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVP---TLGHYGA 293
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 83.1 bits (206), Expect = 2e-17
Identities = 43/262 (16%), Positives = 91/262 (34%), Gaps = 51/262 (19%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSS 136
L L++ ++N + L SLS+L+ L L + + +
Sbjct: 59 KLELLNL---SSNVL-----------YETLDLESLSTLRTLDLNNNYV-----QELLVGP 99
Query: 137 SLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSL 196
S+E L+ ++N +S + S + + + L +NK T + + L LK N +
Sbjct: 100 SIETLHAANNNIS-RVS--CSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEI 156
Query: 197 SGF-LPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMV 255
+L ++L N + ++ L+ D+ N + +
Sbjct: 157 DTVNFAELAASSDTLEHLNLQYNFIY-DVKGQVVFAKLKTLDLSSN----KLAFM----- 206
Query: 256 TLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIP-SLLSLPSITYLDIHGNKLT 314
E +S + + + N+ V I +L ++ + D+ GN
Sbjct: 207 --------------GPEFQSAAGVTWISLRNNKLV--LIEKALRFSQNLEHFDLRGNGFH 250
Query: 315 GLLLQNM-SCNPQLAFVDLSSN 335
L++ S N ++ V +
Sbjct: 251 CGTLRDFFSKNQRVQTVAKQTV 272
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 98.9 bits (247), Expect = 9e-23
Identities = 56/284 (19%), Positives = 96/284 (33%), Gaps = 49/284 (17%)
Query: 492 SHGQIYKGKL-TDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550
GQ K G ++ ++ L + + + ++++ L H N++ +G
Sbjct: 22 CFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYK--- 78
Query: 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFS 610
D + I EY TLR I + W QR++ A I G+ +LH S
Sbjct: 79 DKR----LNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH--------S 126
Query: 611 NN-----LKITDVLLDENFHVKI----------NSYNLPLLAEARGKGSAEVSSPAKKTS 655
N L + L+ EN +V + + P + K +
Sbjct: 127 MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNP 186
Query: 656 ------VLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKS 709
++ D+K DV+ GI+L EII D L + +
Sbjct: 187 YWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADP--------DYLPRTMDFGLNVRG 238
Query: 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
+D C S + +RC +P+ RPS L+
Sbjct: 239 FLDRYCPPNC-PPSFFPIT---VRCCDLDPEKRPSFVKLEHWLE 278
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 1e-22
Identities = 49/237 (20%), Positives = 94/237 (39%), Gaps = 17/237 (7%)
Query: 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQI-SSLRNLQTLILDDN 170
+ ++L L + A LE L L+ N +S ++ ++L NL+TL L N
Sbjct: 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVS-AVEPGAFNNLFNLRTLGLRSN 90
Query: 171 KFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD--LR 228
+ + L L+ L + N + L L +L+ + + N L I
Sbjct: 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV-YISHRAFS 149
Query: 229 NLKNLRVFDVQDN---YFGPR-FPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDI 284
L +L ++ LH ++ L LR+ + + +L+ L+I
Sbjct: 150 GLNSLEQLTLEKCNLTSIPTEALSHLHG-LIVLRLRHLNINA-IRDYSFKRLYRLKVLEI 207
Query: 285 SLNRFVGPFIPSLLSLPSITYLDIHGNKLTGL---LLQNMSCNPQLAFVDLSSNLLT 338
S ++ P+ L ++T L I LT + ++++ L F++LS N ++
Sbjct: 208 SHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHL---VYLRFLNLSYNPIS 261
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 92.9 bits (231), Expect = 5e-20
Identities = 56/268 (20%), Positives = 93/268 (34%), Gaps = 23/268 (8%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSS 136
NL L + +N + F LS+L L + + L
Sbjct: 81 NLRTLGL---RSNRL-----KLIPLGVF----TGLSNLTKLDISENKIVILLDYMFQDLY 128
Query: 137 SLEILNLSSNYLSGSIPVQI-SSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNS 195
+L+ L + N L I + S L +L+ L L+ T LS L L VL L++ +
Sbjct: 129 NLKSLEVGDNDLV-YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLN 187
Query: 196 LSGFLPVSLTGLQSLRVVSLS-ANHLSGEIPDLRNLKNLRVFDVQDN---YFGPRFPRLH 251
++ S L L+V+ +S +L P+ NL + R
Sbjct: 188 INAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHL 247
Query: 252 KKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPS--LLSLPSITYLDIH 309
+ L L N + L +LQ++ + + + L + L++
Sbjct: 248 VYLRFLNLSYNPIST-IEGSMLHELLRLQEIQLVGGQLA--VVEPYAFRGLNYLRVLNVS 304
Query: 310 GNKLTGLLLQNMSCNPQLAFVDLSSNLL 337
GN+LT L L + L SN L
Sbjct: 305 GNQLTTLEESVFHSVGNLETLILDSNPL 332
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 85.2 bits (211), Expect = 1e-17
Identities = 40/217 (18%), Positives = 77/217 (35%), Gaps = 16/217 (7%)
Query: 135 SSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNN 194
S+ + ++P I + + L L N+ E + L L L N
Sbjct: 10 SAQDRAVLCHRKRFV-AVPEGIPT--ETRLLDLGKNRIKTLNQDEFASFPHLEELELNEN 66
Query: 195 SLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD--LRNLKNLRVFDVQDN---YFGPR-FP 248
+S P + L +LR + L +N L IP L NL D+ +N F
Sbjct: 67 IVSAVEPGAFNNLFNLRTLGLRSNRLK-LIPLGVFTGLSNLTKLDISENKIVILLDYMFQ 125
Query: 249 RLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIP--SLLSLPSITYL 306
L+ + +L + +N + ++ N L++L + IP +L L + L
Sbjct: 126 DLYN-LKSLEVGDNDLVY-ISHRAFSGLNSLEQLTLEKCNLT--SIPTEALSHLHGLIVL 181
Query: 307 DIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPS 343
+ + + + +L +++S +
Sbjct: 182 RLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTP 218
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 2e-22
Identities = 43/212 (20%), Positives = 89/212 (41%), Gaps = 10/212 (4%)
Query: 128 LPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLS 187
+ + + +I ++ + L ++ S N++ L L N + ++L+ L
Sbjct: 2 IHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLE 61
Query: 188 VLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRF 247
+L+L +N L L L L +LR + L+ N++ E+ +++ L +N
Sbjct: 62 LLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQ-ELLVGPSIETL---HAANNNISRVS 115
Query: 248 PRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVG-PFIPSLLSLPSITYL 306
+ + L NN+ L + +++Q LD+ LN F S ++ +L
Sbjct: 116 CSRGQGKKNIYLANNKIT-MLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHL 174
Query: 307 DIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLT 338
++ N + ++ +L +DLSSN L
Sbjct: 175 NLQYNFIYD--VKGQVVFAKLKTLDLSSNKLA 204
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 94.1 bits (234), Expect = 2e-20
Identities = 53/250 (21%), Positives = 97/250 (38%), Gaps = 22/250 (8%)
Query: 95 LAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPV 154
+ + S S ++K L L L +A + LE+LNLSSN L ++
Sbjct: 17 VTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD- 75
Query: 155 QISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVS 214
+ SL L+TL L++N EL + + L NN++S G +++
Sbjct: 76 -LESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNISRVSCSRGQGKKNIY--- 126
Query: 215 LSANHLSGEIPD--LRNLKNLRVFDVQDNYF----GPRFPRLHKKMVTLVLRNNRFQFGL 268
L+ N ++ + D ++ D++ N + L L+ N
Sbjct: 127 LANNKIT-MLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY--- 182
Query: 269 NPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLA 328
+ + +L+ LD+S N+ P S +T++ + NKL + + + + L
Sbjct: 183 DVKGQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLE 240
Query: 329 FVDLSSNLLT 338
DL N
Sbjct: 241 HFDLRGNGFH 250
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 89.9 bits (223), Expect = 5e-19
Identities = 36/189 (19%), Positives = 70/189 (37%), Gaps = 8/189 (4%)
Query: 151 SIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSL 210
+I + + + D+ A+ S + L L N LS L L
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKL 60
Query: 211 RVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNP 270
+++LS+N L E DL +L LR D+ +NY + TL NN ++
Sbjct: 61 ELLNLSSNVLY-ETLDLESLSTLRTLDLNNNYVQ-ELLVGP-SIETLHAANNNISR-VSC 116
Query: 271 DELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCN-PQLAF 329
+ + + ++ N+ + YLD+ N++ + ++ + L
Sbjct: 117 SRGQG---KKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEH 173
Query: 330 VDLSSNLLT 338
++L N +
Sbjct: 174 LNLQYNFIY 182
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 85.3 bits (211), Expect = 2e-17
Identities = 42/307 (13%), Positives = 95/307 (30%), Gaps = 27/307 (8%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSS 136
L L + NNN + L S++ L + + + S
Sbjct: 81 TLRTLDL---NNNYV--------------QELLVGPSIETLHAANNNI-SRVSCSRG--Q 120
Query: 137 SLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTG-AVPSELSLLQVLSVLSLKNNS 195
+ + L++N ++ + +Q L L N+ + L L+L+ N
Sbjct: 121 GKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNF 180
Query: 196 LSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFG--PRFPRLHKK 253
+ L+ + LS+N L+ P+ ++ + +++N + R +
Sbjct: 181 IYDVKG--QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVLIEKALRFSQN 238
Query: 254 MVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKL 313
+ LR N F G D ++Q + + + ++P++
Sbjct: 239 LEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPTL--GHYGAYCC 296
Query: 314 TGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSNEEQEQHPSNF 373
L L + + G L+ E + + + L + +
Sbjct: 297 EDLPAPFADRLIALKRKEHALLSGQGSETERLECERENQARQREIDALKEQYRTVIDQVT 356
Query: 374 CQNEALA 380
+ +A
Sbjct: 357 LRKQAKI 363
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 84.5 bits (209), Expect = 3e-17
Identities = 51/280 (18%), Positives = 86/280 (30%), Gaps = 19/280 (6%)
Query: 95 LAHNFSTDTFFSTLGSLSSLKVLSL-----VSLGLWGPLPGSIAHSSSLEILNLSSNYLS 149
LA+N T G S ++ L L ++ A S +LE LNL N++
Sbjct: 127 LANNKITMLRDLDEGCRSRVQYLDLKLNEIDTV----NFAELAASSDTLEHLNLQYNFIY 182
Query: 150 GSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQS 209
+ Q+ L+TL L NK + E ++ +SL+NN L + +L Q+
Sbjct: 183 -DVKGQVV-FAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQN 238
Query: 210 LRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFG--PRFPRLHKKMVTLVLRNNRFQFG 267
L L N KN RV V + TL
Sbjct: 239 LEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPTLGHYGAYCCED 298
Query: 268 LNPDELRSYNQLQKLDISLNRFVGPFIPSL----LSLPSITYLDIHGNKLTGLLLQNMSC 323
L L++ + +L G L + +D + ++ Q
Sbjct: 299 LPAPFADRLIALKRKEHALLSGQGSETERLECERENQARQREIDALKEQYRTVIDQVTLR 358
Query: 324 NPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSN 363
++ L + + + A+ L
Sbjct: 359 KQAKITLEQKKKALDEQVSNGRRAHAELDGTLQQAVGQIE 398
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 96.7 bits (241), Expect = 7e-22
Identities = 57/295 (19%), Positives = 113/295 (38%), Gaps = 34/295 (11%)
Query: 492 SHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLD 551
+G+++ GK G VA++ ++++S I +RH N++ + +
Sbjct: 49 RYGEVWMGKW-RGEKVAVKVFFTTEEAS-WFRETEIYQTVLMRHENILGFIAADIK---G 103
Query: 552 DPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSN 611
S + +YLI +Y N +L ++ L + A + V G+ LHT I
Sbjct: 104 TGSWTQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKP 161
Query: 612 N-----LKITDVLLDENFHVKI----------NSYNLPLLAEARGKGSAEVSSP--AKKT 654
LK ++L+ +N I + N + G+ P ++
Sbjct: 162 AIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDES 221
Query: 655 SVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLV--KDLLQVNIGTDEARKSIVD 712
+ +D+Y G+IL E+ + DL+ + ++ R+ +
Sbjct: 222 LNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCI 281
Query: 713 ----PAV-MNECSDESLKRMMELCLRCLSNEPKDRPS---VEDTLWNLQFATQIQ 759
P+ SDE L++M +L C ++ P R + V+ TL + + I+
Sbjct: 282 KKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQDIK 336
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 95.5 bits (238), Expect = 7e-22
Identities = 48/277 (17%), Positives = 98/277 (35%), Gaps = 55/277 (19%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYH-------IELISKLRHSNLVSALG 543
G ++KG+ + D ++VAI+SL + + ++S L H N+V G
Sbjct: 31 GFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYG 90
Query: 544 HCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTG 603
+ ++ E+ P L + + + W ++ + I G++++
Sbjct: 91 LMHN---------PPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ 141
Query: 604 IVPGVF----SNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTS---- 655
P V S N+ + + + K+ + L ++ S
Sbjct: 142 NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL-----SQQS--VHSVSGLLGNFQWMA 194
Query: 656 --VLARTEQ--DDKSDVYDIGIILIEIIVGRP----ITSENVVVLVKDLLQVNIGTDEAR 707
+ E+ +K+D Y +IL I+ G + + + I + R
Sbjct: 195 PETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINM------IREEGLR 248
Query: 708 KSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPS 744
P + +C L+ ++E C S +PK RP
Sbjct: 249 -----PTIPEDC-PPRLRNVIE---LCWSGDPKKRPH 276
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 96.0 bits (239), Expect = 1e-21
Identities = 58/292 (19%), Positives = 117/292 (40%), Gaps = 40/292 (13%)
Query: 492 SHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLD 551
G++++GK G VA++ ++ S I LRH N++ + +
Sbjct: 54 RFGEVWRGKW-RGEEVAVKIFSSREERS-WFREAEIYQTVMLRHENILGFIAADNKDNGT 111
Query: 552 DPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIV-----P 606
+ +L+ +Y + +L +++ Y +T I A++ G+ LH IV P
Sbjct: 112 WTQL---WLVSDYHEHGSLFDYLNR--YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 166
Query: 607 GVFSNNLKITDVLLDENFHVKI----------NSYNLPLLAEARGKGSA-----EVSSPA 651
+ +LK ++L+ +N I ++ + +A G+ EV
Sbjct: 167 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV---L 223
Query: 652 KKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITS--ENVVVLVKDLLQVNIGTDEARKS 709
+ + E ++D+Y +G++ EI I E+ + DL+ + +E RK
Sbjct: 224 DDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKV 283
Query: 710 IVD----PAVMNEC-SDESLKRMMELCLRCLSNEPKDRPS---VEDTLWNLQ 753
+ + P + N S E+L+ M ++ C R + ++ TL L
Sbjct: 284 VCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 335
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 94.3 bits (235), Expect = 2e-21
Identities = 49/288 (17%), Positives = 101/288 (35%), Gaps = 34/288 (11%)
Query: 492 SHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLD 551
+G++++G G VA++ + S T + LRH N++ + +
Sbjct: 20 RYGEVWRGSW-QGENVAVKIFSSRDEKSWFRET-ELYNTVMLRHENILGFIASDMTSRHS 77
Query: 552 DPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSN 611
+ +I Y +L ++ L V + ++I G+ LH I
Sbjct: 78 STQLWLI---THYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP 132
Query: 612 N-----LKITDVLLDENFHVKI----------NSYNLPLLAEARGKGSAEVSSP--AKKT 654
LK ++L+ +N I S N + G+ +P +T
Sbjct: 133 AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDET 192
Query: 655 SVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLV--KDLLQVNIGTDEARKSIVD 712
+ + + D++ G++L E+ D++ + ++ RK +
Sbjct: 193 IQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCV 252
Query: 713 ----PAVMNE-CSDESLKRMMELCLRCLSNEPKDRPS---VEDTLWNL 752
P + N SD +L + +L C P R + ++ TL +
Sbjct: 253 DQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 93.5 bits (233), Expect = 3e-21
Identities = 58/287 (20%), Positives = 110/287 (38%), Gaps = 61/287 (21%)
Query: 492 SHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIE-------LISKLRHSNLVSALGH 544
G++Y+ G VA+ K ++ + IE L + L+H N+++ G
Sbjct: 19 GFGKVYRAFW-IGDEVAV---KAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGV 74
Query: 545 CLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGI 604
CL +P++ ++ E+A L +SG ++ + A+ I +G+ +LH
Sbjct: 75 CLK----EPNLCLV---MEFARGGPLNRVLSGK--RIPPDILVNWAVQIARGMNYLHDEA 125
Query: 605 VPGVFSNNLKITDVLLDENFH--------VKINSYNLPLLAEARGKGSAEVSSPAKKTS- 655
+ + +LK +++L+ + +KI + L AR S A
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL-----AREWHRTTKMS-AAGAYA 179
Query: 656 -----VLARTEQDDKSDVYDIGIILIEIIVGRP----ITSENVVVLVKDLLQVNIGTDEA 706
V+ + SDV+ G++L E++ G I V V ++
Sbjct: 180 WMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGV--------AMNKL 231
Query: 707 RKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
+ + C E ++ME C + +P RPS + L L
Sbjct: 232 A-----LPIPSTC-PEPFAKLME---DCWNPDPHSRPSFTNILDQLT 269
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 95.9 bits (239), Expect = 3e-21
Identities = 44/245 (17%), Positives = 94/245 (38%), Gaps = 12/245 (4%)
Query: 95 LAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPV 154
++ + L S +++L+L L + + A++ +++ L + N + +P
Sbjct: 52 FKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIR-YLPP 110
Query: 155 QI-SSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVV 213
+ ++ L L+L+ N + L+ LS+ NN+L + SL+ +
Sbjct: 111 HVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNL 170
Query: 214 SLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDEL 273
LS+N L+ + L + +L +V N + L +N +
Sbjct: 171 QLSSNRLT-HVD-LSLIPSLFHANVSYNLLS-TLAIP-IAVEELDASHNSINV-VRGPVN 225
Query: 274 RSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLS 333
L L + N LL+ P + +D+ N+L ++ +L + +S
Sbjct: 226 VE---LTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYIS 280
Query: 334 SNLLT 338
+N L
Sbjct: 281 NNRLV 285
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 88.2 bits (219), Expect = 9e-19
Identities = 53/264 (20%), Positives = 99/264 (37%), Gaps = 37/264 (14%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSS 136
LT L + N+++ + F + L LS+ + L + ++
Sbjct: 118 LLTVLVL---ERNDLS-----SLPRGIF----HNTPKLTTLSMSNNNLERIEDDTFQATT 165
Query: 137 SLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSL 196
SL+ L LSSN L+ V +S + +L + N + L++ + L +NS+
Sbjct: 166 SLQNLQLSSNRLTH---VDLSLIPSLFHANVSYNLLS-----TLAIPIAVEELDASHNSI 217
Query: 197 SGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYF----GPRFPRLHK 252
+ L L L N+L+ + L N L D+ N F ++ +
Sbjct: 218 NVVRGPVNVELTIL---KLQHNNLT-DTAWLLNYPGLVEVDLSYNELEKIMYHPFVKM-Q 272
Query: 253 KMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIP-SLLSLPSITYLDIHGN 311
++ L + NNR + L+ LD+S N + + + + L + N
Sbjct: 273 RLERLYISNNRLVA--LNLYGQPIPTLKVLDLSHNHLL--HVERNQPQFDRLENLYLDHN 328
Query: 312 KLTGLLLQNMSCNPQLAFVDLSSN 335
+ L +S + L + LS N
Sbjct: 329 SIVTL---KLSTHHTLKNLTLSHN 349
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 88.2 bits (219), Expect = 1e-18
Identities = 40/239 (16%), Positives = 81/239 (33%), Gaps = 20/239 (8%)
Query: 106 STLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQI-SSLRNLQT 164
S L + + ++ +I+ ++ + +P + S R ++
Sbjct: 15 SNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVEL 73
Query: 165 LILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEI 224
L L+D + + + L + N++ P + L V+ L N LS +
Sbjct: 74 LNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SL 132
Query: 225 PD--LRNLKNLRVFDVQDN---YFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQL 279
P N L + +N + + L L +NR ++ + S L
Sbjct: 133 PRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT-HVDLSLIPS---L 188
Query: 280 QKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLT 338
++S N + +L ++ LD N + + N +L + L N LT
Sbjct: 189 FHANVSYNL-----LSTLAIPIAVEELDASHNSINVV---RGPVNVELTILKLQHNNLT 239
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 82.0 bits (203), Expect = 1e-16
Identities = 33/217 (15%), Positives = 83/217 (38%), Gaps = 17/217 (7%)
Query: 128 LPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLS 187
+ ++ + +++ + +L N + + ++ + L + +
Sbjct: 13 IDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVE 72
Query: 188 VLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD--LRNLKNLRVFDVQDNYF-- 243
+L+L + + + +++ + + N + +P +N+ L V ++ N
Sbjct: 73 LLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDLSS 131
Query: 244 --GPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLP 301
F K+ TL + NN + + D ++ LQ L +S NR + L +P
Sbjct: 132 LPRGIFHNTP-KLTTLSMSNNNLER-IEDDTFQATTSLQNLQLSSNRLTH--VD-LSLIP 186
Query: 302 SITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLT 338
S+ + ++ N L+ L + + +D S N +
Sbjct: 187 SLFHANVSYNLLSTL-----AIPIAVEELDASHNSIN 218
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 78.2 bits (193), Expect = 2e-15
Identities = 48/256 (18%), Positives = 86/256 (33%), Gaps = 43/256 (16%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVL----------------SLV 120
LT L + +NNN+ DTF + +SL+ L SL
Sbjct: 142 KLTTLSM---SNNNL-----ERIEDDTF----QATTSLQNLQLSSNRLTHVDLSLIPSLF 189
Query: 121 SLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSEL 180
+ L ++A ++E L+ S N ++ + + L L L N T + L
Sbjct: 190 HANVSYNLLSTLAIPIAVEELDASHNSIN-VVRGPV--NVELTILKLQHNNLTD--TAWL 244
Query: 181 SLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQD 240
L + L N L + +Q L + +S N L + + L+V D+
Sbjct: 245 LNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSH 304
Query: 241 N---YFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSL 297
N + P+ ++ L L +N L + L+ L +S N +
Sbjct: 305 NHLLHVERNQPQF-DRLENLYLDHNSIVT-LKLSTHHT---LKNLTLSHNDWD--CNSLR 357
Query: 298 LSLPSITYLDIHGNKL 313
++ +
Sbjct: 358 ALFRNVARPAVDDADQ 373
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 69.3 bits (170), Expect = 1e-12
Identities = 35/195 (17%), Positives = 68/195 (34%), Gaps = 14/195 (7%)
Query: 151 SIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSL 210
I + + +D E L +++ KN+++ L + +
Sbjct: 12 CIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQV 71
Query: 211 RVVSLSANHLSGEIPD--LRNLKNLRVFDVQDN---YFGPRFPRLHKKMVTLVLRNNRFQ 265
+++L+ + EI ++ + N Y P + + LVL N
Sbjct: 72 ELLNLNDLQIE-EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS 130
Query: 266 FGLNPDELRSYNQLQKLDISLNRFVGPFIPSLL--SLPSITYLDIHGNKLTGLLLQNMSC 323
L + +L L +S N I + S+ L + N+LT + L +
Sbjct: 131 S-LPRGIFHNTPKLTTLSMSNNNLE--RIEDDTFQATTSLQNLQLSSNRLTHVDLSLI-- 185
Query: 324 NPQLAFVDLSSNLLT 338
P L ++S NLL+
Sbjct: 186 -PSLFHANVSYNLLS 199
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 3e-11
Identities = 28/180 (15%), Positives = 61/180 (33%), Gaps = 11/180 (6%)
Query: 166 ILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIP 225
+ + S L V + + + + L + ++V+ + + ++P
Sbjct: 3 VKPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLP 61
Query: 226 D--LRNLKNLRVFDVQDN---YFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQ 280
L + + + + ++ D + L + N ++ L P ++ L
Sbjct: 62 AALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRY-LPPHVFQNVPLLT 120
Query: 281 KLDISLNRFVGPFIPS--LLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLT 338
L + N +P + P +T L + N L + L + LSSN LT
Sbjct: 121 VLVLERNDLS--SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT 178
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 94.3 bits (235), Expect = 4e-21
Identities = 53/284 (18%), Positives = 100/284 (35%), Gaps = 52/284 (18%)
Query: 492 SHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIE--LISKLRHSNLVSALGHCLDFS 549
GQ+Y G+ G VAIR + + + + + + E + RH N+V +G C+
Sbjct: 45 RFGQVYHGRW-HGE-VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS-- 100
Query: 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVF 609
P ++II TL S + L + A IVKG+ +LH G+
Sbjct: 101 --PPHLAII---TSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHA---KGIL 152
Query: 610 SNNLKITDVLLDENFHVKI--------NSYNLPLLAEARGKGSA--------EVSSPAKK 653
+LK +V D V I + E + + E+
Sbjct: 153 HKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSP 211
Query: 654 TSVLARTEQDDKSDVYDIGIILIEIIVGRP----ITSENVVVLVKDLLQVNIGTDEARKS 709
+ + SDV+ +G I E+ +E ++ Q+ G + +
Sbjct: 212 DTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAII------WQMGTGM---KPN 262
Query: 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
+ + + ++ C + E ++RP+ + L+
Sbjct: 263 LSQ----IGM-GKEISDILL---FCWAFEQEERPTFTKLMDMLE 298
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 96.0 bits (239), Expect = 5e-21
Identities = 54/245 (22%), Positives = 88/245 (35%), Gaps = 30/245 (12%)
Query: 95 LAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPV 154
L N ++ L L++L L + G+ ++L L L N L+ +IP
Sbjct: 71 LHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLT-TIPN 129
Query: 155 QI-SSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL-KNNSLSGFLPVSLTGLQSLRV 212
L L+ L L +N + + L L L + LS + GL +LR
Sbjct: 130 GAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRY 189
Query: 213 VSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDE 272
++L+ +L EIP+L L L L L N + P
Sbjct: 190 LNLAMCNLR-EIPNLTPLIKLD---------------------ELDLSGNHLSA-IRPGS 226
Query: 273 LRSYNQLQKLDISLNRFVGPFIPS--LLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFV 330
+ LQKL + ++ I +L S+ +++ N LT L + L +
Sbjct: 227 FQGLMHLQKLWMIQSQIQ--VIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERI 284
Query: 331 DLSSN 335
L N
Sbjct: 285 HLHHN 289
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 86.7 bits (215), Expect = 4e-18
Identities = 46/222 (20%), Positives = 80/222 (36%), Gaps = 22/222 (9%)
Query: 128 LPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLS 187
+P I S++ +LNL N + LR+L+ L L N + L L+
Sbjct: 58 VPDGI--STNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLN 115
Query: 188 VLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD--LRNLKNLRVFDVQDNYFGP 245
L L +N L+ + L L+ + L N + IP + +LR D+ +
Sbjct: 116 TLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIE-SIPSYAFNRIPSLRRLDLGEL---K 171
Query: 246 RFPRLH-------KKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIP--S 296
R + + L L + L +L +LD+S N I S
Sbjct: 172 RLSYISEGAFEGLSNLRYLNLAMCNLR---EIPNLTPLIKLDELDLSGNHLS--AIRPGS 226
Query: 297 LLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLT 338
L + L + +++ + L ++L+ N LT
Sbjct: 227 FQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLT 268
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 82.9 bits (205), Expect = 7e-17
Identities = 47/247 (19%), Positives = 96/247 (38%), Gaps = 28/247 (11%)
Query: 110 SLSSLKVLSLVSLGLWGPLPGSIAH---------SSSLEILNLSSNYLSGSIPVQISSLR 160
+ +L ++SL+S+ L G + + + S+ + L +P IS+
Sbjct: 8 GMPALLLVSLLSVLLMGCVAETGSAQTCPSVCSCSNQFSKVICVRKNLR-EVPDGIST-- 64
Query: 161 NLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHL 220
N + L L +N+ + L+ L +L L N + + GL +L + L N L
Sbjct: 65 NTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124
Query: 221 SGEIPD--LRNLKNLRVFDVQDNYFG---PRFPRLHKKMVTLVL-RNNRFQFGLNPDELR 274
+ IP+ L L+ +++N + L L R + ++
Sbjct: 125 T-TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSY-ISEGAFE 182
Query: 275 SYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGL---LLQNMSCNPQLAFVD 331
+ L+ L++++ IP+L L + LD+ GN L+ + Q + L +
Sbjct: 183 GLSNLRYLNLAMCNLR--EIPNLTPLIKLDELDLSGNHLSAIRPGSFQGL---MHLQKLW 237
Query: 332 LSSNLLT 338
+ + +
Sbjct: 238 MIQSQIQ 244
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 67.9 bits (166), Expect = 5e-12
Identities = 40/168 (23%), Positives = 65/168 (38%), Gaps = 18/168 (10%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLP-GSIAHS 135
L +L + NN I + + F + SL+ L L L + G+
Sbjct: 137 KLKELWL---RNNPI-----ESIPSYAF----NRIPSLRRLDLGELKRLSYISEGAFEGL 184
Query: 136 SSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNS 195
S+L LNL+ L IP ++ L L L L N + P L L L + +
Sbjct: 185 SNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQ 242
Query: 196 LSGFLPVSLTGLQSLRVVSLSANHLSGEIPD--LRNLKNLRVFDVQDN 241
+ + LQSL ++L+ N+L+ +P L +L + N
Sbjct: 243 IQVIERNAFDNLQSLVEINLAHNNLT-LLPHDLFTPLHHLERIHLHHN 289
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 2e-07
Identities = 25/121 (20%), Positives = 39/121 (32%), Gaps = 16/121 (13%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSS 136
NL L++ N+ L L L L L L PGS
Sbjct: 186 NLRYLNL---AMCNL-----------REIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLM 231
Query: 137 SLEILNLSSNYLSGSIPVQ-ISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNS 195
L+ L + + + I +L++L + L N T + L L + L +N
Sbjct: 232 HLQKLWMIQSQIQ-VIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNP 290
Query: 196 L 196
Sbjct: 291 W 291
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 95.6 bits (238), Expect = 6e-21
Identities = 51/245 (20%), Positives = 85/245 (34%), Gaps = 30/245 (12%)
Query: 95 LAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPV 154
L N T L L+VL L + G+ +SL L L N+L+ IP
Sbjct: 82 LMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLT-VIPS 140
Query: 155 QI-SSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL-KNNSLSGFLPVSLTGLQSLRV 212
L L+ L L +N + + L L L + L + GL +L+
Sbjct: 141 GAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKY 200
Query: 213 VSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDE 272
++L ++ ++P+L L L L + N F + P
Sbjct: 201 LNLGMCNIK-DMPNLTPLVGLE---------------------ELEMSGNHFPE-IRPGS 237
Query: 273 LRSYNQLQKLDISLNRFVGPFIPS--LLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFV 330
+ L+KL + ++ I L S+ L++ N L+ L + L +
Sbjct: 238 FHGLSSLKKLWVMNSQVS--LIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVEL 295
Query: 331 DLSSN 335
L N
Sbjct: 296 HLHHN 300
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 88.7 bits (220), Expect = 1e-18
Identities = 49/236 (20%), Positives = 85/236 (36%), Gaps = 19/236 (8%)
Query: 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNK 171
+ + GL +P I S+ LNL N + L +L+ L L N
Sbjct: 54 NQFSKVVCTRRGLSE-VPQGI--PSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNS 110
Query: 172 FTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD--LRN 229
+ L L+ L L +N L+ + L LR + L N + IP
Sbjct: 111 IRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIE-SIPSYAFNR 169
Query: 230 LKNLRVFDVQDN----YFGPR-FPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDI 284
+ +L D+ + Y F L + L L + + L L++L++
Sbjct: 170 VPSLMRLDLGELKKLEYISEGAFEGLFN-LKYLNLGMCNIK---DMPNLTPLVGLEELEM 225
Query: 285 SLNRFVGPFIP--SLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLT 338
S N F I S L S+ L + ++++ + L ++L+ N L+
Sbjct: 226 SGNHFP--EIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLS 279
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 82.9 bits (205), Expect = 9e-17
Identities = 41/217 (18%), Positives = 79/217 (36%), Gaps = 27/217 (12%)
Query: 135 SSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNN 194
S+ + + LS +P I S N + L L +N L L VL L N
Sbjct: 53 SNQFSKVVCTRRGLS-EVPQGIPS--NTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRN 109
Query: 195 SLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD--LRNLKNLRVFDVQDNYFGPRFPRLH- 251
S+ + GL SL + L N L+ IP L LR +++N +
Sbjct: 110 SIRQIEVGAFNGLASLNTLELFDNWLT-VIPSGAFEYLSKLRELWLRNN----PIESIPS 164
Query: 252 ------KKMVTLVL-RNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSIT 304
++ L L + ++ ++ L+ L++ + +P+L L +
Sbjct: 165 YAFNRVPSLMRLDLGELKKLEY-ISEGAFEGLFNLKYLNLGMCNIK--DMPNLTPLVGLE 221
Query: 305 YLDIHGNKLTGL---LLQNMSCNPQLAFVDLSSNLLT 338
L++ GN + + L + + ++ ++
Sbjct: 222 ELEMSGNHFPEIRPGSFHGL---SSLKKLWVMNSQVS 255
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 69.0 bits (169), Expect = 2e-12
Identities = 40/168 (23%), Positives = 66/168 (39%), Gaps = 18/168 (10%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLP-GSIAHS 135
L +L + NN I + + F + SL L L L + G+
Sbjct: 148 KLRELWL---RNNPI-----ESIPSYAF----NRVPSLMRLDLGELKKLEYISEGAFEGL 195
Query: 136 SSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNS 195
+L+ LNL + +P ++ L L+ L + N F P L L L + N+
Sbjct: 196 FNLKYLNLGMCNIK-DMP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQ 253
Query: 196 LSGFLPVSLTGLQSLRVVSLSANHLSGEIPD--LRNLKNLRVFDVQDN 241
+S + GL SL ++L+ N+LS +P L+ L + N
Sbjct: 254 VSLIERNAFDGLASLVELNLAHNNLS-SLPHDLFTPLRYLVELHLHHN 300
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 1e-07
Identities = 28/121 (23%), Positives = 42/121 (34%), Gaps = 16/121 (13%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSS 136
NL L++ NI L L L+ L + PGS S
Sbjct: 197 NLKYLNL---GMCNI-----------KDMPNLTPLVGLEELEMSGNHFPEIRPGSFHGLS 242
Query: 137 SLEILNLSSNYLSGSIPVQ-ISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNS 195
SL+ L + ++ +S I L +L L L N + + L+ L L L +N
Sbjct: 243 SLKKLWVMNSQVS-LIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNP 301
Query: 196 L 196
Sbjct: 302 W 302
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 93.5 bits (233), Expect = 8e-21
Identities = 51/220 (23%), Positives = 89/220 (40%), Gaps = 22/220 (10%)
Query: 129 PGSIAHSSSLEILNLSSNYLSGSIPVQI-SSLRNLQTLILDDNKFTGAVPSELSLLQVLS 187
G + +L L L +N +S I + L L+ L L N+ +P ++ + L
Sbjct: 69 DGDFKNLKNLHTLILINNKIS-KISPGAFAPLVKLERLYLSKNQLK-ELPEKM--PKTLQ 124
Query: 188 VLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHL-SGEIPD--LRNLKNLRVFDVQDNYFG 244
L + N ++ GL + VV L N L S I + + +K L + D
Sbjct: 125 ELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT 184
Query: 245 --PR--FPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIP--SLL 298
P+ P L L L N+ ++ L+ N L KL +S N + SL
Sbjct: 185 TIPQGLPPSLT----ELHLDGNKITK-VDAASLKGLNNLAKLGLSFNSISA--VDNGSLA 237
Query: 299 SLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLT 338
+ P + L ++ NKL + ++ + + V L +N ++
Sbjct: 238 NTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNIS 276
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 8e-18
Identities = 47/242 (19%), Positives = 82/242 (33%), Gaps = 37/242 (15%)
Query: 76 DNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVS--LGLWGPLPGSIA 133
L +L + + N I F L+ + V+ L + L G G+
Sbjct: 121 KTLQELRV---HENEIT-----KVRKSVF----NGLNQMIVVELGTNPLKSSGIENGAFQ 168
Query: 134 HSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKN 193
L + ++ ++ +IP +L L LD NK T + L L L+ L L
Sbjct: 169 GMKKLSYIRIADTNIT-TIPQ--GLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSF 225
Query: 194 NSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRLHK 252
NS+S SL LR + L+ N L ++P L + K ++V + +N
Sbjct: 226 NSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNIS-------- 276
Query: 253 KMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPS--LLSLPSITYLDIHG 310
+ +N F + S + + N I + + +
Sbjct: 277 -----AIGSNDFCPPGYNTKKAS---YSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGN 328
Query: 311 NK 312
K
Sbjct: 329 YK 330
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 75.8 bits (187), Expect = 6e-15
Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 26/213 (12%)
Query: 137 SLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSL 196
L ++ S L +P + + L L +NK T + L+ L L L NN +
Sbjct: 32 HLRVVQCSDLGLE-KVPKDLPP--DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKI 88
Query: 197 SGFLPVSLTGLQSLRVVSLSANHLSGEIPD--LRNLKNLR-----VFDVQDNYFGPRFPR 249
S P + L L + LS N L E+P+ + L+ LR + V+ + F
Sbjct: 89 SKISPGAFAPLVKLERLYLSKNQLK-ELPEKMPKTLQELRVHENEITKVRKSVFNG---- 143
Query: 250 LHKKMVTLVLRNNRFQ-FGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDI 308
+M+ + L N + G+ + +L + I+ IP L PS+T L +
Sbjct: 144 -LNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT--IPQGL-PPSLTELHL 199
Query: 309 HGNKLTGL---LLQNMSCNPQLAFVDLSSNLLT 338
GNK+T + L+ + LA + LS N ++
Sbjct: 200 DGNKITKVDAASLKGL---NNLAKLGLSFNSIS 229
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 2e-20
Identities = 62/264 (23%), Positives = 108/264 (40%), Gaps = 44/264 (16%)
Query: 492 SHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLD 551
+ G + K K VAI+ ++ +S + + +S++ H N+V G CL+
Sbjct: 20 AFGVVCKAKW-RAKDVAIK--QIESESERKAFIVELRQLSRVNHPNIVKLYGACLN---- 72
Query: 552 DPSISIIYLIFEYAPNETLRSFI--SGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVF 609
+ L+ EYA +L + + + P T ++ + +GV +LH+ +
Sbjct: 73 -----PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 127
Query: 610 SNNLKITDVLLDENF-HVKINSYNLPLLAEAR--------GKGSAEVSSPAKKTSVLART 660
+LK ++LL +KI + A KGSA +P V +
Sbjct: 128 HRDLKPPNLLLVAGGTVLKICDFGT-----ACDIQTHMTNNKGSAAWMAP----EVFEGS 178
Query: 661 EQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECS 720
+K DV+ GIIL E+I R E + + V+ GT R P ++
Sbjct: 179 NYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGT---R-----PPLIKNL- 229
Query: 721 DESLKRMMELCLRCLSNEPKDRPS 744
+ ++ +M RC S +P RPS
Sbjct: 230 PKPIESLMT---RCWSKDPSQRPS 250
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 94.8 bits (236), Expect = 2e-20
Identities = 54/316 (17%), Positives = 90/316 (28%), Gaps = 48/316 (15%)
Query: 23 PHSNQLQLFQYQTLVRIQQL------LNYPSVSSSFNTTTVTDFCNIEPTP-------SL 69
+ L+ F L + L L Y N+ +
Sbjct: 238 RNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERV 297
Query: 70 TLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTF-------FSTLGSLSSLKVLSLV-- 120
Y L + + TF + L SL+ L L
Sbjct: 298 KDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRN 357
Query: 121 SLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVP-SE 179
L G S ++SL+ L+LS N + ++ L L+ L + S
Sbjct: 358 GLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSV 416
Query: 180 LSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD--LRNLKNLRVFD 237
L+ L L + + GL SL V+ ++ N L+NL
Sbjct: 417 FLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLT--- 473
Query: 238 VQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSL 297
L L + + L+P S + LQ L+++ N+
Sbjct: 474 ------------------FLDLSQCQLEQ-LSPTAFNSLSSLQVLNMASNQLKSVPDGIF 514
Query: 298 LSLPSITYLDIHGNKL 313
L S+ + +H N
Sbjct: 515 DRLTSLQKIWLHTNPW 530
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 93.2 bits (232), Expect = 6e-20
Identities = 46/214 (21%), Positives = 74/214 (34%), Gaps = 14/214 (6%)
Query: 135 SSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNN 194
S + L+LS N L S LQ L L + L LS L L N
Sbjct: 27 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGN 86
Query: 195 SLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYF-----GPRFP 248
+ + +GL SL+ + +L+ + +LK L+ +V N F
Sbjct: 87 PIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFS 146
Query: 249 RLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQ----KLDISLNRFVGPFIPSLLSLPSIT 304
L + L L +N+ Q + +LR +Q+ LD+SLN P +
Sbjct: 147 NL-TNLEHLDLSSNKIQ-SIYCTDLRVLHQMPLLNLSLDLSLNPMNF-IQPGAFKEIRLH 203
Query: 305 YLDIHGNKLTGLLLQNMSCN-PQLAFVDLSSNLL 337
L + N + +++ L L
Sbjct: 204 KLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEF 237
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 92.1 bits (229), Expect = 2e-19
Identities = 60/288 (20%), Positives = 108/288 (37%), Gaps = 27/288 (9%)
Query: 59 DFCNIEPTPSLTLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLS 118
+ N+E L + L L I + ++ D L+++ S
Sbjct: 239 NEGNLEKFDKSAL----EGLCNLTIE-EFRLAYL-----DYYLDDIIDLFNCLTNVSSFS 288
Query: 119 LVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPS 178
LVS+ + S ++ + L L + L++L+ L NK S
Sbjct: 289 LVSVTIERVKDFS--YNFGWQHLELVNCKFGQ---FPTLKLKSLKRLTFTSNKGGN-AFS 342
Query: 179 ELSLLQVLSVLSLKNNSLS--GFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVF 236
E+ L L L L N LS G S G SL+ + LS N + + L+ L
Sbjct: 343 EVDLPS-LEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHL 401
Query: 237 DVQDNYF-----GPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVG 291
D Q + F L + ++ L + + + + L+ L ++ N F
Sbjct: 402 DFQHSNLKQMSEFSVFLSL-RNLIYLDISHTHTRV-AFNGIFNGLSSLEVLKMAGNSFQE 459
Query: 292 PFIPSLLS-LPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLT 338
F+P + + L ++T+LD+ +L L + L ++++SN L
Sbjct: 460 NFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLK 507
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 88.6 bits (220), Expect = 2e-18
Identities = 50/232 (21%), Positives = 84/232 (36%), Gaps = 18/232 (7%)
Query: 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNK 171
S K L L L S L++L+LS + SL +L TLIL N
Sbjct: 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87
Query: 172 FTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHL-SGEIPD-LRN 229
S L L L +L+ + L++L+ ++++ N + S ++P+ N
Sbjct: 88 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSN 147
Query: 230 LKNLRVFDVQDNYFG-------PRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKL 282
L NL D+ N ++ ++L L N F + P + L KL
Sbjct: 148 LTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNF-IQPGAFKEIR-LHKL 205
Query: 283 DISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSS 334
+ N L++ + G ++ L+L L D S+
Sbjct: 206 TLRNNFD-------SLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSA 250
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 82.5 bits (204), Expect = 1e-16
Identities = 50/281 (17%), Positives = 91/281 (32%), Gaps = 38/281 (13%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSS 136
+L+ L + N I + + F LSSL+ L V L I H
Sbjct: 77 HLSTLIL---TGNPI-----QSLALGAF----SGLSSLQKLVAVETNLASLENFPIGHLK 124
Query: 137 SLEILNLSSNYL-SGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSV----LSL 191
+L+ LN++ N + S +P S+L NL+ L L NK ++L +L + + L L
Sbjct: 125 TLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDL 184
Query: 192 KNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD--LRNLKNLRVFDVQDNYFGP---- 245
N ++ P + + L ++L N S + ++ L L V + F
Sbjct: 185 SLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNL 243
Query: 246 ------RFPRLHKKMVT-LVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVG-PFIPSL 297
L + L + D + +
Sbjct: 244 EKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYN 303
Query: 298 LSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLT 338
+ ++ + L L++ L + +SN
Sbjct: 304 FGWQHLELVNCKFGQFPTLKLKS------LKRLTFTSNKGG 338
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 79.8 bits (197), Expect = 1e-15
Identities = 46/266 (17%), Positives = 79/266 (29%), Gaps = 26/266 (9%)
Query: 95 LAHNFSTDTFFST-LGSLSSLKVLSLVSLG------LWGPLPGSIAHSSSLEILNLSSNY 147
L +NF + T + L+ L+V LV L ++ +L I Y
Sbjct: 207 LRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 266
Query: 148 LSGS---IPVQISSLRNLQTLILDDNKFTGAVP-SELSLLQVLSVLSLKNNSLSGFLPVS 203
L I + L N+ + L S Q L +++ K
Sbjct: 267 LDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTL---- 322
Query: 204 LTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDN-----YFGPRFPRLHKKMVTLV 258
L+SL+ ++ ++N +L +L D+ N + + L
Sbjct: 323 --KLKSLKRLTFTSNKGG-NAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLD 379
Query: 259 LRNNRFQFGLNPDELRSYNQLQKLDISLNRFVG-PFIPSLLSLPSITYLDIHGNKLTGLL 317
L N QL+ LD + LSL ++ YLDI
Sbjct: 380 LSFNGVIT--MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAF 437
Query: 318 LQNMSCNPQLAFVDLSSNLLTGYLPS 343
+ L + ++ N
Sbjct: 438 NGIFNGLSSLEVLKMAGNSFQENFLP 463
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 70.5 bits (173), Expect = 1e-12
Identities = 37/157 (23%), Positives = 57/157 (36%), Gaps = 12/157 (7%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSS 136
L L ++N+ S + F SL +L L + G S
Sbjct: 397 QLEHLDF---QHSNL-----KQMSEFSVFL---SLRNLIYLDISHTHTRVAFNGIFNGLS 445
Query: 137 SLEILNLSSNYLSGSIPVQI-SSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNS 195
SLE+L ++ N + I + LRNL L L + P+ + L L VL++ +N
Sbjct: 446 SLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQ 505
Query: 196 LSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKN 232
L L SL+ + L N P + L
Sbjct: 506 LKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSR 542
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 95.0 bits (236), Expect = 2e-20
Identities = 61/271 (22%), Positives = 103/271 (38%), Gaps = 31/271 (11%)
Query: 110 SLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDD 169
S L L + L LP L+ L++S N L+ S+P S L L +
Sbjct: 119 LPSGLCKLWIFGNQL-TSLPVLP---PGLQELSVSDNQLA-SLPALPSELCKLW---AYN 170
Query: 170 NKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRN 229
N+ T ++P S LQ LS + +N L+ LP + L L N L+ +P L
Sbjct: 171 NQLT-SLPMLPSGLQELS---VSDNQLA-SLPTLPSELYKL---WAYNNRLT-SLPAL-- 219
Query: 230 LKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRF 289
L+ V N P L ++ L++ NR L P + L L + N+
Sbjct: 220 PSGLKELIVSGNRLT-SLPVLPSELKELMVSGNRLT-SL-PMLP---SGLLSLSVYRNQL 273
Query: 290 VGPFIP-SLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVE 348
+P SL+ L S T +++ GN L+ + ++ S + + +
Sbjct: 274 T--RLPESLIHLSSETTVNLEGNPLSER---TLQALREITSAPGYSGPIIRFDMAGASAP 328
Query: 349 AKTRLVLYSKNCLSNEEQEQHPSNFCQNEAL 379
+TR + + +E P+ +
Sbjct: 329 RETRALHLAAADWLVPAREGEPAPADRWHMF 359
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 92.6 bits (230), Expect = 1e-19
Identities = 57/230 (24%), Positives = 92/230 (40%), Gaps = 41/230 (17%)
Query: 132 IAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL 191
++ +LN+ + L+ ++P + ++ TL++ DN T ++P+ L+ L +
Sbjct: 36 ACLNNGNAVLNVGESGLT-TLPDCL--PAHITTLVIPDNNLT-SLPALPPELRTLE---V 88
Query: 192 KNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNL--------------KNLRVFD 237
N L+ LPV GL L + S HL L L L+
Sbjct: 89 SGNQLT-SLPVLPPGLLELSIFSNPLTHLPALPSGLCKLWIFGNQLTSLPVLPPGLQELS 147
Query: 238 VQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSL 297
V DN P L ++ L NN+ L P + LQ+L +S N+ +P+L
Sbjct: 148 VSDNQLA-SLPALPSELCKLWAYNNQLTS-L-PMLP---SGLQELSVSDNQLA--SLPTL 199
Query: 298 LSLPSITYLDIHGNKLTGL--LLQNMSCNPQLAFVDLSSNLLTGYLPSCL 345
S + L + N+LT L L L + +S N LT LP
Sbjct: 200 PS--ELYKLWAYNNRLTSLPALPSG------LKELIVSGNRLT-SLPVLP 240
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 77.6 bits (191), Expect = 6e-15
Identities = 43/191 (22%), Positives = 74/191 (38%), Gaps = 27/191 (14%)
Query: 154 VQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVV 213
++ L + ++ T +P L ++ L + +N+L+ LP L++L
Sbjct: 34 MRACLNNGNAVLNVGESGLT-TLPDC--LPAHITTLVIPDNNLT-SLPALPPELRTLE-- 87
Query: 214 SLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDE 272
+S N L+ +P L L +F P L + L + N Q P
Sbjct: 88 -VSGNQLT-SLPVLPPGLLELSIFSNPLT----HLPALPSGLCKLWIFGN--QLTSLPVL 139
Query: 273 LRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDL 332
LQ+L +S N+ +P+L S + L + N+LT L L + +
Sbjct: 140 P---PGLQELSVSDNQLAS--LPALPS--ELCKLWAYNNQLTSLP----MLPSGLQELSV 188
Query: 333 SSNLLTGYLPS 343
S N L LP+
Sbjct: 189 SDNQLA-SLPT 198
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 59.1 bits (143), Expect = 3e-09
Identities = 37/181 (20%), Positives = 63/181 (34%), Gaps = 19/181 (10%)
Query: 77 NLTQLHIAGDNNNNIN------GGLAHNFSTDTFFSTL-GSLSSLKVLSLVSLGLWGPLP 129
L +L + ++N + L ++ + ++L S LK L + L LP
Sbjct: 182 GLQELSV---SDNQLASLPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNRL-TSLP 237
Query: 130 GSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVL 189
S L+ L +S N L+ S+P+ S L +L + N+ T +P L L + +
Sbjct: 238 VLP---SELKELMVSGNRLT-SLPMLPS---GLLSLSVYRNQLT-RLPESLIHLSSETTV 289
Query: 190 SLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPR 249
+L+ N LS +L + S S D R
Sbjct: 290 NLEGNPLSERTLQALREITSAPGYSGPIIRFDMAGASAPRETRALHLAAADWLVPAREGE 349
Query: 250 L 250
Sbjct: 350 P 350
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 51.4 bits (123), Expect = 9e-07
Identities = 23/132 (17%), Positives = 41/132 (31%), Gaps = 6/132 (4%)
Query: 110 SLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDD 169
S LK L + L LP S L L++ N L+ +P + L + T+ L+
Sbjct: 239 LPSELKELMVSGNRL-TSLPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEG 293
Query: 170 NKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRN 229
N + L + S S ++ + + +
Sbjct: 294 NPLSERTLQALREITSAPGYSGPIIRFD-MAGASAPRETRALHLAAADWLVPAREGEPAP 352
Query: 230 LKNLRVFDVQDN 241
+F +DN
Sbjct: 353 ADRWHMFGQEDN 364
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 89.3 bits (222), Expect = 1e-19
Identities = 50/222 (22%), Positives = 76/222 (34%), Gaps = 18/222 (8%)
Query: 128 LPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFT--GAVPSELSLLQV 185
+P I SS L L SN L L L L L N + G
Sbjct: 22 VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTS 79
Query: 186 LSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD---LRNLKNLRVFDVQDN- 241
L L L N + + + GL+ L + ++L ++ + +L+NL D+
Sbjct: 80 LKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLK-QMSEFSVFLSLRNLIYLDISHTH 137
Query: 242 --YFGPR-FPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIP--S 296
F L + L + N FQ PD L LD+S + + +
Sbjct: 138 TRVAFNGIFNGLS-SLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLE--QLSPTA 194
Query: 297 LLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLT 338
SL S+ L++ N L C L +D S N +
Sbjct: 195 FNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM 236
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 88.1 bits (219), Expect = 3e-19
Identities = 60/241 (24%), Positives = 94/241 (39%), Gaps = 21/241 (8%)
Query: 109 GSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLS--GSIPVQISSLRNLQTLI 166
G SS L L S L G + L L+LSSN LS G +L+ L
Sbjct: 25 GIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLD 84
Query: 167 LDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSL-TGLQSLRVVSLSANHLSGEIP 225
L N + S L+ L L ++++L S+ L++L + +S H
Sbjct: 85 LSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTR-VAF 142
Query: 226 D--LRNLKNLRVFDVQDN----YFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQL 279
+ L +L V + N F P + + L L + + L+P S + L
Sbjct: 143 NGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQ-LSPTAFNSLSSL 201
Query: 280 QKLDISLNRFVGPFIPS--LLSLPSITYLDIHGNKLTGL---LLQNMSCNPQLAFVDLSS 334
Q L++S N F + + L S+ LD N + LQ+ LAF++L+
Sbjct: 202 QVLNMSHNNFF--SLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHF--PSSLAFLNLTQ 257
Query: 335 N 335
N
Sbjct: 258 N 258
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 78.1 bits (193), Expect = 8e-16
Identities = 38/202 (18%), Positives = 72/202 (35%), Gaps = 32/202 (15%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSL-----KVLSLVSLGLWGPLPGS 131
+L L + + N + + + F L L L + + ++ L
Sbjct: 79 SLKYLDL---SFNGVI-------TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLR-- 126
Query: 132 IAHSSSLEILNLSSNYLSGSIPVQI-SSLRNLQTLILDDNKFTGAVPSE-LSLLQVLSVL 189
+L L++S + I + L +L+ L + N F + + L+ L+ L
Sbjct: 127 -----NLIYLDISHTHTR-VAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 180
Query: 190 SLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD--LRNLKNLRVFDVQDNYF---- 243
L L P + L SL+V+++S N+ + + L +L+V D N+
Sbjct: 181 DLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFF-SLDTFPYKCLNSLQVLDYSLNHIMTSK 239
Query: 244 GPRFPRLHKKMVTLVLRNNRFQ 265
+ L L N F
Sbjct: 240 KQELQHFPSSLAFLNLTQNDFA 261
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 2e-12
Identities = 39/187 (20%), Positives = 65/187 (34%), Gaps = 15/187 (8%)
Query: 161 NLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHL 220
+ + + T +VP+ + + L L++N L L L +SLS+N L
Sbjct: 8 SGTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGL 64
Query: 221 S-GEIPD--LRNLKNLRVFDVQDNYFG---PRFPRLHKKMVTLVLRNNRFQFGLNPDELR 274
S +L+ D+ N F L ++ L +++ +
Sbjct: 65 SFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLE-QLEHLDFQHSNLKQMSEFSVFL 123
Query: 275 SYNQLQKLDISLNRFVGPFIPS--LLSLPSITYLDIHGNKLTGLLLQNMSCN-PQLAFVD 331
S L LDIS + L S+ L + GN L ++ L F+D
Sbjct: 124 SLRNLIYLDISHTHTR--VAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLD 181
Query: 332 LSSNLLT 338
LS L
Sbjct: 182 LSQCQLE 188
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 90.1 bits (224), Expect = 4e-19
Identities = 60/303 (19%), Positives = 102/303 (33%), Gaps = 50/303 (16%)
Query: 62 NIEPTPSLTLVCYEDNLTQLHIA-GDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLV 120
N+ T + + NLT++ + + + A + G + V L
Sbjct: 7 NVSNTFLQEPLRHSSNLTEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLR 66
Query: 121 SLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSEL 180
L L++ LS S+P +L++L+ N T +P
Sbjct: 67 DCLD-----------RQAHELELNNLGLS-SLP---ELPPHLESLVASCNSLT-ELPELP 110
Query: 181 SLLQVLSVLSLKNNSLSGFLPV---------------SLTGLQSLRVVSLSANHLSGEIP 225
L+ L V + +LS P+ L L+++ + N L ++P
Sbjct: 111 QSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLK-KLP 169
Query: 226 DLRNLKNLRVFDVQDNYFG--PRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLD 283
DL +L +N P L + + NN + PD S L+ +
Sbjct: 170 DL--PPSLEFIAAGNNQLEELPELQNL-PFLTAIYADNNSLKK--LPDLPLS---LESIV 221
Query: 284 ISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPS 343
N +P L +LP +T + N L L P L +++ N LT LP
Sbjct: 222 AGNNILE--ELPELQNLPFLTTIYADNNLLKTL----PDLPPSLEALNVRDNYLTD-LPE 274
Query: 344 CLQ 346
Q
Sbjct: 275 LPQ 277
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 87.7 bits (218), Expect = 2e-18
Identities = 57/285 (20%), Positives = 93/285 (32%), Gaps = 57/285 (20%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSS 136
+L + NN + L +L L + + L LP
Sbjct: 174 SLEFIAA---GNNQL-----------EELPELQNLPFLTAIYADNNSL-KKLPDLP---L 215
Query: 137 SLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSL 196
SLE + +N L +P ++ +L L T+ D+N +P L+ L+V L
Sbjct: 216 SLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLK-TLPDLPPSLEALNVRDNYLTDL 272
Query: 197 SGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVT 256
P L L V + LS P+L L + N L +
Sbjct: 273 ----PELPQSLTFLDVSENIFSGLSELPPNLYYL------NASSNEI-RSLCDLPPSLEE 321
Query: 257 LVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGL 316
L + NN+ L P L++L S N +P L ++ L + N L
Sbjct: 322 LNVSNNKLIE-L-PALPPR---LERLIASFNHLA--EVPELPQ--NLKQLHVEYNPLREF 372
Query: 317 -----LLQNMSCNPQLAFV----------DLSSNLLTGYLPSCLQ 346
++++ N LA V + +N L P +
Sbjct: 373 PDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLR-EFPDIPE 416
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 84.7 bits (210), Expect = 2e-17
Identities = 47/233 (20%), Positives = 89/233 (38%), Gaps = 34/233 (14%)
Query: 128 LPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELS------ 181
+ ++ L+ S+ L+ +PV+ ++++ +++ P
Sbjct: 3 INPRNVSNTFLQEPLRHSSNLT-EMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMA 61
Query: 182 -------LLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNL 233
L + L L N LS LP L+SL S N L+ E+P+ ++LK+L
Sbjct: 62 VSRLRDCLDRQAHELELNNLGLS-SLPELPPHLESL---VASCNSLT-ELPELPQSLKSL 116
Query: 234 RVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPF 293
V + L + L + NN+ + EL++ + L+ +D+ N
Sbjct: 117 LVDNNNLK----ALSDLPPLLEYLGVSNNQLE---KLPELQNSSFLKIIDVDNNSL--KK 167
Query: 294 IPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQ 346
+P PS+ ++ N+L L + P L + +N L LP
Sbjct: 168 LPD--LPPSLEFIAAGNNQLEE--LPELQNLPFLTAIYADNNSLK-KLPDLPL 215
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 2e-13
Identities = 55/279 (19%), Positives = 98/279 (35%), Gaps = 58/279 (20%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSS 136
+L + NN + L +L L + + L LP
Sbjct: 216 SLESIVA---GNNIL-----------EELPELQNLPFLTTIYADNNLL-KTLPDLP---P 257
Query: 137 SLEILNLSSNYLSGSIPVQISSLR-----------------NLQTLILDDNKFTGAVPSE 179
SLE LN+ NYL+ +P SL NL L N+ ++
Sbjct: 258 SLEALNVRDNYLT-DLPELPQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIR-SLCDL 315
Query: 180 LSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQ 239
L+ L+ + NN L LP L+ L S NHL+ E+P+L +NL+ V+
Sbjct: 316 PPSLEELN---VSNNKLI-ELPALPPRLERL---IASFNHLA-EVPEL--PQNLKQLHVE 365
Query: 240 DNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLS 299
N FP + + + L + ++ + P+ ++ L++L + N P +
Sbjct: 366 YNPL-REFPDIPESVEDLRMNSHLAEV---PELPQN---LKQLHVETNPLR--EFPDIPE 416
Query: 300 LPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLT 338
S+ L ++ ++ +L +
Sbjct: 417 --SVEDLRMNSERVVDPYEFAHETTDKLEDDVFEHHHHH 453
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 85.8 bits (213), Expect = 2e-18
Identities = 47/217 (21%), Positives = 80/217 (36%), Gaps = 16/217 (7%)
Query: 128 LPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLS 187
+P I ++ + + L N +S + RNL L L N + + L +L
Sbjct: 26 VPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLE 83
Query: 188 VLSLKNNSLSGFLPVS-LTGLQSLRVVSLSANHLSGEIPD--LRNLKNLRVFDVQDN--- 241
L L +N+ + + GL L + L L E+ R L L+ +QDN
Sbjct: 84 QLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQ-ELGPGLFRGLAALQYLYLQDNALQ 142
Query: 242 YFGPR-FPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPS--LL 298
F L + L L NR + R + L +L + NR +
Sbjct: 143 ALPDDTFRDLGN-LTHLFLHGNRISS-VPERAFRGLHSLDRLLLHQNRVA--HVHPHAFR 198
Query: 299 SLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSN 335
L + L + N L+ L + ++ L ++ L+ N
Sbjct: 199 DLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 235
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 76.2 bits (188), Expect = 2e-15
Identities = 44/195 (22%), Positives = 75/195 (38%), Gaps = 12/195 (6%)
Query: 151 SIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSL 210
++PV I + Q + L N+ + + + L++L L +N L+ + TGL L
Sbjct: 25 AVPVGIPA--ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALL 82
Query: 211 RVVSLSANHLSGEIPD--LRNLKNLRVFDVQDN---YFGPRFPRLHKKMVTLVLRNNRFQ 265
+ LS N + L L + GP R + L L++N Q
Sbjct: 83 EQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ 142
Query: 266 FGLNPDELRSYNQLQKLDISLNRFVGPFIP--SLLSLPSITYLDIHGNKLTGLLLQNMSC 323
L D R L L + NR +P + L S+ L +H N++ +
Sbjct: 143 A-LPDDTFRDLGNLTHLFLHGNRIS--SVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRD 199
Query: 324 NPQLAFVDLSSNLLT 338
+L + L +N L+
Sbjct: 200 LGRLMTLYLFANNLS 214
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 1e-12
Identities = 45/173 (26%), Positives = 65/173 (37%), Gaps = 26/173 (15%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSL-----VSLGLWGPLPGS 131
L QL + +N + + TF L L L L LG PG
Sbjct: 81 LLEQLDL--SDNAQL-----RSVDPATF----HGLGRLHTLHLDRCGLQELG-----PGL 124
Query: 132 IAHSSSLEILNLSSNYLSGSIPVQI-SSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLS 190
++L+ L L N L ++P L NL L L N+ + L L L
Sbjct: 125 FRGLAALQYLYLQDNALQ-ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLL 183
Query: 191 LKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD--LRNLKNLRVFDVQDN 241
L N ++ P + L L + L AN+LS +P L L+ L+ + DN
Sbjct: 184 LHQNRVAHVHPHAFRDLGRLMTLYLFANNLS-ALPTEALAPLRALQYLRLNDN 235
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 4e-06
Identities = 30/122 (24%), Positives = 47/122 (38%), Gaps = 16/122 (13%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSS 136
L L++ +N + DTF L +L L L + +
Sbjct: 130 ALQYLYL---QDNAL-----QALPDDTF----RDLGNLTHLFLHGNRISSVPERAFRGLH 177
Query: 137 SLEILNLSSNYLSGSIPVQI-SSLRNLQTLILDDNKFTGAVPSE-LSLLQVLSVLSLKNN 194
SL+ L L N ++ + L L TL L N + A+P+E L+ L+ L L L +N
Sbjct: 178 SLDRLLLHQNRVA-HVHPHAFRDLGRLMTLYLFANNLS-ALPTEALAPLRALQYLRLNDN 235
Query: 195 SL 196
Sbjct: 236 PW 237
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 85.4 bits (212), Expect = 3e-18
Identities = 49/226 (21%), Positives = 93/226 (41%), Gaps = 20/226 (8%)
Query: 106 STLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTL 165
LS L+ +++ + GL LP ++ + LE L L+ N L ++P I+SL L+ L
Sbjct: 98 DQAFRLSHLQHMTIDAAGLME-LPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLREL 155
Query: 166 ILDDNKFTGAVPSELSLLQV---------LSVLSLKNNSLSGFLPVSLTGLQSLRVVSLS 216
+ +P L+ L L L+ + LP S+ LQ+L+ + +
Sbjct: 156 SIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIR 214
Query: 217 ANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFP----RLHKKMVTLVLRN-NRFQFGLNPD 271
+ LS P + +L L D++ +P + L+L++ + L P
Sbjct: 215 NSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGR-APLKRLILKDCSNLLT-L-PL 271
Query: 272 ELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLL 317
++ QL+KLD+ + + LP+ + + + L
Sbjct: 272 DIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQLD 317
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 80.4 bits (199), Expect = 2e-16
Identities = 35/211 (16%), Positives = 66/211 (31%), Gaps = 24/211 (11%)
Query: 110 SLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLR--NLQTLIL 167
LS + W A+S++ +I + L + + L L
Sbjct: 31 VLSQWQRHYNADRNRW-HSAWRQANSNNPQIETRTGRALK-ATADLLEDATQPGRVALEL 88
Query: 168 DDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD- 226
P + L L +++ L LP ++ L ++L+ N L +P
Sbjct: 89 RSVPLP-QFPDQAFRLSHLQHMTIDAAGLME-LPDTMQQFAGLETLTLARNPLR-ALPAS 145
Query: 227 LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISL 286
+ +L LR ++ P E + LQ L +
Sbjct: 146 IASLNRLRELSIRACPELTELP-------------EPLASTDASGEHQGLVNLQSLRLEW 192
Query: 287 NRFVGPFIP-SLLSLPSITYLDIHGNKLTGL 316
+P S+ +L ++ L I + L+ L
Sbjct: 193 TGIR--SLPASIANLQNLKSLKIRNSPLSAL 221
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 80.4 bits (199), Expect = 2e-16
Identities = 34/209 (16%), Positives = 73/209 (34%), Gaps = 38/209 (18%)
Query: 106 STLGSLSSLKVLSLV----------SLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQ 155
+++ SL+ L+ LS+ L G +L+ L L + S+P
Sbjct: 144 ASIASLNRLRELSIRACPELTELPEPLAST-DASGEHQGLVNLQSLRLEWTGIR-SLPAS 201
Query: 156 ISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSL 215
I++L+NL++L + ++ + A+ + L L L L+ + P G L+ + L
Sbjct: 202 IANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLIL 260
Query: 216 S-ANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDEL 273
++L +P + L L D++ + L P +
Sbjct: 261 KDCSNLL-TLPLDIHRLTQLEKLDLRGC----------VNLSRL------------PSLI 297
Query: 274 RSYNQLQKLDISLNRFVGPFIPSLLSLPS 302
+ + + ++ P+
Sbjct: 298 AQLPANCIILVPPHLQAQLDQHRPVARPA 326
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 70.4 bits (173), Expect = 4e-13
Identities = 35/240 (14%), Positives = 66/240 (27%), Gaps = 36/240 (15%)
Query: 126 GPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQV 185
G HSS E L + +S + + +
Sbjct: 2 GSSHHHHHHSSGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHS----AWRQANSNN 57
Query: 186 LSVLSLKNNSLSGFLPVSLTGLQS--LRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNY 242
+ + +L L + L + L + PD L +L+ +
Sbjct: 58 PQIETRTGRALKA-TADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAG 115
Query: 243 FG---PRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDIS-LNRFV-------- 290
+ + TL L N + L P + S N+L++L I
Sbjct: 116 LMELPDTMQQF-AGLETLTLARNPLR-AL-PASIASLNRLRELSIRACPELTELPEPLAS 172
Query: 291 GPFIPSLLSLPSITYLDIHGNKLTGL-----LLQNMSCNPQLAFVDLSSNLLTGYLPSCL 345
L ++ L + + L LQN L + + ++ L+ L +
Sbjct: 173 TDASGEHQGLVNLQSLRLEWTGIRSLPASIANLQN------LKSLKIRNSPLSA-LGPAI 225
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 83.8 bits (207), Expect = 1e-17
Identities = 44/226 (19%), Positives = 73/226 (32%), Gaps = 20/226 (8%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSS 136
L +L + N + G +T L+ L + ++ L
Sbjct: 96 GLQELTL---ENLEVTG----TAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLK 148
Query: 137 -SLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTG-------AVPSELSLLQVLSV 188
L++L+++ + Q+ L TL L DN G P + LQVL++
Sbjct: 149 PGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLAL 208
Query: 189 LSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLR--NLKNLRVFDVQDNYFGPR 246
+ + SG L+ + LS N L L ++
Sbjct: 209 RNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQV 268
Query: 247 FPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGP 292
L K+ L L NR +PDEL + L + N F+
Sbjct: 269 PKGLPAKLSVLDLSYNRLDRNPSPDELPQ---VGNLSLKGNPFLDS 311
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 82.3 bits (203), Expect = 3e-17
Identities = 55/304 (18%), Positives = 98/304 (32%), Gaps = 29/304 (9%)
Query: 59 DFCNIE-PTPSLTLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTF-FSTLGSLSSLKV 116
CN P P + + + G + + D F+ + SLK
Sbjct: 13 CSCNFSDPKPDWSSAFNCLGAADVELYGGGRSLEYLLKRVDTEADLGQFTDIIKSLSLKR 72
Query: 117 LSLVSLGLWGPLPGSIAH---SSSLEILNLSSNYLSGSIPVQISSL--RNLQTLILDDNK 171
L++ + + + S L+ L L + ++G+ P + +L L L +
Sbjct: 73 LTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVS 132
Query: 172 FTGAVPSELSLLQV-----LSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIP- 225
+ + L+ LQ L VLS+ F + +L + LS N GE
Sbjct: 133 WAT-RDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGL 191
Query: 226 -------DLRNLKNLRVFDVQDNYFGPRFPRLHKKMV---TLVLRNNRFQFGLNPDELRS 275
L+ L + + L V L L +N +
Sbjct: 192 ISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDW 251
Query: 276 YNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSN 335
+QL L++S +P L ++ LD+ N+L + PQ+ + L N
Sbjct: 252 PSQLNSLNLSFTGLKQ--VPKGLP-AKLSVLDLSYNRLDRNPSPDEL--PQVGNLSLKGN 306
Query: 336 LLTG 339
Sbjct: 307 PFLD 310
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 44.9 bits (106), Expect = 5e-05
Identities = 31/177 (17%), Positives = 51/177 (28%), Gaps = 24/177 (13%)
Query: 173 TGAVPSEL--SLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNL 230
GA EL + +L + + SL+ +++ A IP
Sbjct: 31 LGAADVELYGGGRSLEYLLKRVDTEADLGQFTDIIKSLSLKRLTVRAA----RIPSRILF 86
Query: 231 KNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQ-FGLNPDELRSYNQLQKLDISLNRF 289
LRV L + L L N P + L L++ +
Sbjct: 87 GALRVLG---------ISGLQE----LTLENLEVTGTAPPPLLEATGPDLNILNLRNVSW 133
Query: 290 VG--PFIPSL--LSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLP 342
++ L P + L I + + P L+ +DLS N G
Sbjct: 134 ATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERG 190
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 85.7 bits (212), Expect = 2e-17
Identities = 40/239 (16%), Positives = 81/239 (33%), Gaps = 20/239 (8%)
Query: 106 STLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQI-SSLRNLQT 164
S L + + ++ +I+ ++ + +P + S R ++
Sbjct: 21 SNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVEL 79
Query: 165 LILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEI 224
L L+D + + + L + N++ P + L V+ L N LS +
Sbjct: 80 LNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SL 138
Query: 225 PD--LRNLKNLRVFDVQDN---YFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQL 279
P N L + +N + + L L +NR ++ + S L
Sbjct: 139 PRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH-VDLSLIPS---L 194
Query: 280 QKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLT 338
++S N + +L ++ LD N + + N +L + L N LT
Sbjct: 195 FHANVSYNL-----LSTLAIPIAVEELDASHNSINVV---RGPVNVELTILKLQHNNLT 245
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 77.7 bits (191), Expect = 6e-15
Identities = 33/217 (15%), Positives = 83/217 (38%), Gaps = 17/217 (7%)
Query: 128 LPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLS 187
+ ++ + +++ + +L N + + ++ + L + +
Sbjct: 19 IDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVE 78
Query: 188 VLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD--LRNLKNLRVFDVQDNYF-- 243
+L+L + + + +++ + + N + +P +N+ L V ++ N
Sbjct: 79 LLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDLSS 137
Query: 244 --GPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLP 301
F K+ TL + NN + + D ++ LQ L +S NR + L +P
Sbjct: 138 LPRGIFHNTP-KLTTLSMSNNNLER-IEDDTFQATTSLQNLQLSSNRLT--HVD-LSLIP 192
Query: 302 SITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLT 338
S+ + ++ N L+ L + + +D S N +
Sbjct: 193 SLFHANVSYNLLSTL-----AIPIAVEELDASHNSIN 224
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 75.7 bits (186), Expect = 2e-14
Identities = 51/267 (19%), Positives = 91/267 (34%), Gaps = 42/267 (15%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVL----------------SLV 120
LT L + +NNN+ DTF + +SL+ L SL
Sbjct: 148 KLTTLSM---SNNNL-----ERIEDDTF----QATTSLQNLQLSSNRLTHVDLSLIPSLF 195
Query: 121 SLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSEL 180
+ L ++A ++E L+ S N ++ + + L L L N T + L
Sbjct: 196 HANVSYNLLSTLAIPIAVEELDASHNSIN-VVRGPV--NVELTILKLQHNNLTD--TAWL 250
Query: 181 SLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQD 240
L + L N L + +Q L + +S N L + + L+V D+
Sbjct: 251 LNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSH 310
Query: 241 N---YFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVG-PFIPS 296
N + P+ ++ L L +N L + L+ L +S N +
Sbjct: 311 NHLLHVERNQPQF-DRLENLYLDHNSIVT-LKLSTHHT---LKNLTLSHNDWDCNSLRAL 365
Query: 297 LLSLPSITYLDIHGNKLTGLLLQNMSC 323
++ D + L++ C
Sbjct: 366 FRNVARPAVDDADQHCKIDYQLEHGLC 392
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 66.1 bits (161), Expect = 2e-11
Identities = 35/195 (17%), Positives = 68/195 (34%), Gaps = 14/195 (7%)
Query: 151 SIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSL 210
I + + +D E L +++ KN+++ L + +
Sbjct: 18 CIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQV 77
Query: 211 RVVSLSANHLSGEIPD--LRNLKNLRVFDVQDN---YFGPRFPRLHKKMVTLVLRNNRFQ 265
+++L+ + EI ++ + N Y P + + LVL N
Sbjct: 78 ELLNLNDLQIE-EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS 136
Query: 266 FGLNPDELRSYNQLQKLDISLNRFVGPFIPSLL--SLPSITYLDIHGNKLTGLLLQNMSC 323
L + +L L +S N I + S+ L + N+LT + L +
Sbjct: 137 S-LPRGIFHNTPKLTTLSMSNNNLE--RIEDDTFQATTSLQNLQLSSNRLTHVDLSLI-- 191
Query: 324 NPQLAFVDLSSNLLT 338
P L ++S NLL+
Sbjct: 192 -PSLFHANVSYNLLS 205
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 81.2 bits (201), Expect = 6e-17
Identities = 59/307 (19%), Positives = 111/307 (36%), Gaps = 61/307 (19%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALG------H 544
+ GQ+ K + D AI+ ++ +++ + + + L++ L H +V +
Sbjct: 18 AFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS-EVMLLASLNHQYVVRYYAAWLERRN 76
Query: 545 CLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIA---IVKGVQFLH 601
+ S +++ EY N TL I QR I++ + ++H
Sbjct: 77 FVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQ---QRDEYWRLFRQILEALSYIH 133
Query: 602 TGIVPGVFSNN-----LKITDVLLDENFHVKIN----SYNLPLLAEARGKGSAEVSSPAK 652
S LK ++ +DE+ +VKI + N+ + S + +
Sbjct: 134 --------SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 653 KTS------------VLARTEQDD-KSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQV 699
+ VL T + K D+Y +GII E+I T V ++K L
Sbjct: 186 NLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP-FSTGMERVNILKKLR-- 242
Query: 700 NIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTL---WNLQFAT 756
SI P ++ + K ++ + ++P RP L W L
Sbjct: 243 -------SVSIEFPPDFDDNKMKVEK---KIIRLLIDHDPNKRPGARTLLNSGW-LPVKH 291
Query: 757 QIQGLKE 763
Q + +KE
Sbjct: 292 QDEVIKE 298
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 80.1 bits (198), Expect = 3e-16
Identities = 47/225 (20%), Positives = 73/225 (32%), Gaps = 28/225 (12%)
Query: 76 DNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGL-WGPLPGSIAH 134
+L +L I ++N I F L ++ + + L
Sbjct: 123 SSLVELRI---HDNRIR-----KVPKGVF----SGLRNMNCIEMGGNPLENSGFEPGAFD 170
Query: 135 SSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNN 194
L L +S L+ IP + L L LD NK +L L L L +N
Sbjct: 171 GLKLNYLRISEAKLT-GIPKDL--PETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHN 227
Query: 195 SLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYF---------G 244
+ SL+ L +LR + L N LS +P L +LK L+V + N
Sbjct: 228 QIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCP 286
Query: 245 PRFPRLHKKMVTLVLRNNRFQF-GLNPDELRSYNQLQKLDISLNR 288
F + L NN + + P R + +
Sbjct: 287 VGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 78.1 bits (193), Expect = 1e-15
Identities = 53/239 (22%), Positives = 93/239 (38%), Gaps = 31/239 (12%)
Query: 113 SLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKF 172
L+V+ LGL +P I S +L+L +N +S L++L L+L +NK
Sbjct: 34 HLRVVQCSDLGLKA-VPKEI--SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKI 90
Query: 173 TGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD--LRNL 230
+ S L+ L L + N L P + L LR + N + ++P L
Sbjct: 91 SKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSSLVELR---IHDNRIR-KVPKGVFSGL 146
Query: 231 KNLRVFDVQDNYFGPR------FPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDI 284
+N+ ++ N F L K+ L + + G+ D + L +L +
Sbjct: 147 RNMNCIEMGGNPLENSGFEPGAFDGL--KLNYLRISEAKLT-GIPKDLPET---LNELHL 200
Query: 285 SLNRFVGPFIP--SLLSLPSITYLDIHGNKLTGL---LLQNMSCNPQLAFVDLSSNLLT 338
N+ I LL + L + N++ + L + P L + L +N L+
Sbjct: 201 DHNKIQ--AIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFL---PTLRELHLDNNKLS 254
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 77.7 bits (192), Expect = 1e-15
Identities = 57/278 (20%), Positives = 106/278 (38%), Gaps = 41/278 (14%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSS 136
+ T L + NN+I D F L L L LV+ + + +
Sbjct: 55 DTTLLDL---QNNDI-----SELRKDDF----KGLQHLYALVLVNNKISKIHEKAFSPLR 102
Query: 137 SLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSL 196
L+ L +S N+L IP + +L L + DN+ S L+ ++ + + N L
Sbjct: 103 KLQKLYISKNHLV-EIPPNL--PSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPL 159
Query: 197 --SGFLPVSLTGLQSLRVVSLSANHLSGEIPD--LRNLKNLRVFD-----VQDNYFGPRF 247
SGF P + GL L + +S L+ IP L L + ++ R+
Sbjct: 160 ENSGFEPGAFDGL-KLNYLRISEAKLT-GIPKDLPETLNELHLDHNKIQAIELEDL-LRY 216
Query: 248 PRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPS-LLSLPSITYL 306
+L++ L L +N+ + + L L++L + N+ +P+ L L + +
Sbjct: 217 SKLYR----LGLGHNQIRM-IENGSLSFLPTLRELHLDNNKLS--RVPAGLPDLKLLQVV 269
Query: 307 DIHGNKLTGL------LLQNMSCNPQLAFVDLSSNLLT 338
+H N +T + + + L +N +
Sbjct: 270 YLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVP 307
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 79.4 bits (196), Expect = 5e-16
Identities = 54/276 (19%), Positives = 105/276 (38%), Gaps = 15/276 (5%)
Query: 114 LKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFT 173
+ ++SL + I SS L+ SIP ++ +++L L +N+ T
Sbjct: 9 WVLGVIISLSKEESSNQASLSCDRNGICKGSSGSLN-SIPSGLTE--AVKSLDLSNNRIT 65
Query: 174 GAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD--LRNLK 231
S+L L L L +N ++ S + L SL + LS N+LS + + L
Sbjct: 66 YISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLS-NLSSSWFKPLS 124
Query: 232 NLRVFDVQDNYF-----GPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISL 286
+L ++ N + F L K + V + F + + L++L+I
Sbjct: 125 SLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTK-IQRKDFAGLTFLEELEIDA 183
Query: 287 NRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQ 346
+ SL S+ ++++L +H + LL + + ++L L + S L
Sbjct: 184 SDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELS 243
Query: 347 V---EAKTRLVLYSKNCLSNEEQEQHPSNFCQNEAL 379
+ + + +++E Q Q L
Sbjct: 244 TGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGL 279
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 77.9 bits (192), Expect = 2e-15
Identities = 48/246 (19%), Positives = 84/246 (34%), Gaps = 20/246 (8%)
Query: 106 STLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQI-SSLRNLQT 164
S L +L+ L L S G+ S + SLE L+LS NYLS ++ L +L
Sbjct: 70 SDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLS-NLSSSWFKPLSSLTF 128
Query: 165 LILDDNKFTGAVPSEL-SLLQVLSVLSLKNNSLSGFLPV-SLTGLQSLRVVSLSANHLSG 222
L L N + + L S L L +L + N + GL L + + A+ L
Sbjct: 129 LNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQ- 187
Query: 223 EIPD--LRNLKNLRVFDVQDNYFG--PR--FPRLHKKMVTLVLRNNRFQ-------FGLN 269
L++++N+ + + L LR+
Sbjct: 188 SYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSS-VECLELRDTDLDTFHFSELSTGE 246
Query: 270 PDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAF 329
+ L + + I+ + L + + L+ N+L + L
Sbjct: 247 TNSLIKKFTFRNVKITDESLF-QVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQK 305
Query: 330 VDLSSN 335
+ L +N
Sbjct: 306 IWLHTN 311
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 75.9 bits (187), Expect = 6e-15
Identities = 38/227 (16%), Positives = 79/227 (34%), Gaps = 20/227 (8%)
Query: 129 PGSIAHSSSLEILNLSSNYLSGSIPVQI-SSLRNLQTLILDDNKFTGAVPSELSLLQVLS 187
+ +L+ L L+SN ++ +I SSL +L+ L L N + S L L+
Sbjct: 69 NSDLQRCVNLQALVLTSNGIN-TIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLT 127
Query: 188 VLSLKNNSLSGFLPVSL-TGLQSLRVVSLSANHLSGEIPD--LRNLKNLRVFDVQDN--- 241
L+L N SL + L L+++ + +I L L ++ +
Sbjct: 128 FLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQ 187
Query: 242 -YFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLS- 299
Y + + L+L + L + + ++ L++ L +
Sbjct: 188 SYEPKSLKSIQN-VSHLILHMKQHIL-LLEIFVDVTSSVECLELRDTDLDTFHFSELSTG 245
Query: 300 -------LPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTG 339
+ + I L ++ + ++ L ++ S N L
Sbjct: 246 ETNSLIKKFTFRNVKITDESLFQVM-KLLNQISGLLELEFSRNQLKS 291
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 72.8 bits (179), Expect = 7e-14
Identities = 45/246 (18%), Positives = 77/246 (31%), Gaps = 40/246 (16%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSL-----KVLSLVSLGLWGPLPGS 131
+L L + + N + N S+ F L SL+ L +L L+ L
Sbjct: 101 SLEHLDL---SYNYL-----SNLSSSWF-KPLSSLTFLNLLGNPYKTLGETSLFSHLT-- 149
Query: 132 IAHSSSLEILNLSSNYLSGSIPVQI-SSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLS 190
L+IL + + I + + L L+ L +D + P L +Q +S L
Sbjct: 150 -----KLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLI 204
Query: 191 LKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRL 250
L L + + S+ + L L L L
Sbjct: 205 LHMKQHILLLEIFVDVTSSVECLELRDTDLDT--FHFSELSTG------------ETNSL 250
Query: 251 HKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPS--LLSLPSITYLDI 308
KK ++ L + L +L+ S N+ +P L S+ + +
Sbjct: 251 IKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKS--VPDGIFDRLTSLQKIWL 308
Query: 309 HGNKLT 314
H N
Sbjct: 309 HTNPWD 314
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 80.4 bits (198), Expect = 7e-16
Identities = 49/263 (18%), Positives = 92/263 (34%), Gaps = 47/263 (17%)
Query: 86 DNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSS 145
+NN +++ +N + T+ + + + +
Sbjct: 8 NNNFSLSQNSFYNTISGTYADYFSAWDKWE---------------------KQALPGENR 46
Query: 146 NYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLT 205
N + + L L+ + ++P L ++VL + N+L LP
Sbjct: 47 NEAVSLLK--ECLINQFSELQLNRLNLS-SLPDNL--PPQITVLEITQNALI-SLPELPA 100
Query: 206 GLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQ 265
L+ L N LS +P+L +L+ DV +N P L + + NN+
Sbjct: 101 SLEYL---DACDNRLS-TLPEL--PASLKHLDVDNNQL-TMLPELPALLEYINADNNQLT 153
Query: 266 FGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGL---LLQNMS 322
P+ S L+ L + N+ F+P L S+ LD+ N L L ++N
Sbjct: 154 M--LPELPTS---LEVLSVRNNQLT--FLPELPE--SLEALDVSTNLLESLPAVPVRNHH 204
Query: 323 CNPQLAFVDLSSNLLTGYLPSCL 345
F N +T ++P +
Sbjct: 205 SEETEIFFRCRENRIT-HIPENI 226
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 63.8 bits (155), Expect = 1e-10
Identities = 26/180 (14%), Positives = 63/180 (35%), Gaps = 16/180 (8%)
Query: 110 SLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDD 169
+ L+ ++ + L LP +SLE+L++ +N L+ +P +L+ L +
Sbjct: 138 LPALLEYINADNNQL-TMLPELP---TSLEVLSVRNNQLT-FLP---ELPESLEALDVST 189
Query: 170 NKFTGAVPSEL----SLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIP 225
N ++P+ + + N ++ +P ++ L + L N LS I
Sbjct: 190 NLLE-SLPAVPVRNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIR 247
Query: 226 DLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRS--YNQLQKLD 283
+ + + + + + + F N S ++ + +
Sbjct: 248 ESLSQQTAQPDYHGPRIYFSMSDGQQNTLHRPLADAVTAWFPENKQSDVSQIWHAFEHEE 307
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 61.1 bits (148), Expect = 7e-10
Identities = 40/233 (17%), Positives = 76/233 (32%), Gaps = 14/233 (6%)
Query: 110 SLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQT----L 165
+SL+VLS+ + L LP SLE L++S+N L S+P + +
Sbjct: 158 LPTSLEVLSVRNNQL-TFLPELP---ESLEALDVSTNLLE-SLPAVPVRNHHSEETEIFF 212
Query: 166 ILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIP 225
+N+ T +P + L + L++N LS + SL+ + + S
Sbjct: 213 RCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTAQPDYHGPRIYFSMSDG 271
Query: 226 DLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDIS 285
L V + + + + + F D L +
Sbjct: 272 QQNTLHRPLADAVTAWFPENKQSDVSQIWHAFEHEEHANTFSAFLDRLSDTVSARNTSGF 331
Query: 286 LNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLT 338
+ V ++ L + L + ++ L + +L LL
Sbjct: 332 REQ-VAAWLEKLSASAE---LRQQSFAVAADATESCEDRVALTWNNLRKTLLV 380
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 77.0 bits (190), Expect = 2e-15
Identities = 50/244 (20%), Positives = 97/244 (39%), Gaps = 39/244 (15%)
Query: 95 LAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPV 154
+ TDT T L + LS G+ + G + + ++L L L N ++ +
Sbjct: 26 AGKSNVTDT--VTQADLDGITTLSAFGTGV-TTIEG-VQYLNNLIGLELKDNQIT-DLAP 80
Query: 155 QISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVS 214
+ +L + L L N S ++ LQ + L L + ++ P L GL +L+V+
Sbjct: 81 -LKNLTKITELELSGNPLK--NVSAIAGLQSIKTLDLTSTQITDVTP--LAGLSNLQVLY 135
Query: 215 LSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELR 274
L N ++ I L L NL+ + + ++ L L
Sbjct: 136 LDLNQIT-NISPLAGLTNLQYLSIGNA-----------QVSDL-------------TPLA 170
Query: 275 SYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSS 334
+ ++L L N+ I L SLP++ + + N+++ + ++ L V L++
Sbjct: 171 NLSKLTTLKADDNKISD--ISPLASLPNLIEVHLKNNQISD--VSPLANTSNLFIVTLTN 226
Query: 335 NLLT 338
+T
Sbjct: 227 QTIT 230
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 68.6 bits (168), Expect = 1e-12
Identities = 36/202 (17%), Positives = 74/202 (36%), Gaps = 35/202 (17%)
Query: 137 SLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSL 196
+ + + ++ ++ + L + TL T + L L L LK+N +
Sbjct: 20 NAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVTTI--EGVQYLNNLIGLELKDNQI 75
Query: 197 SGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVT 256
+ P L L + + LS N L + + L++++ T
Sbjct: 76 TDLAP--LKNLTKITELELSGNPLK-NVSAIAGLQSIK---------------------T 111
Query: 257 LVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGL 316
L L + + + L + LQ L + LN+ I L L ++ YL I +++
Sbjct: 112 LDLTSTQIT---DVTPLAGLSNLQVLYLDLNQITN--ISPLAGLTNLQYLSIGNAQVSD- 165
Query: 317 LLQNMSCNPQLAFVDLSSNLLT 338
L ++ +L + N ++
Sbjct: 166 -LTPLANLSKLTTLKADDNKIS 186
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 2e-04
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSS 136
NL L++ + N I T S L L++L+ LS+ + + L +A+ S
Sbjct: 130 NLQVLYL---DLNQI-----------TNISPLAGLTNLQYLSIGNAQVSD-LTP-LANLS 173
Query: 137 SLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSL 196
L L N +S P ++SL NL + L +N+ + S L+ L +++L N ++
Sbjct: 174 KLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDV--SPLANTSNLFIVTLTNQTI 229
Query: 197 SGFLPVSLTGLQSLRVVS 214
+ L VV
Sbjct: 230 TNQPVFYNNNLVVPNVVK 247
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 4e-04
Identities = 29/135 (21%), Positives = 50/135 (37%), Gaps = 24/135 (17%)
Query: 62 NIEPTPSLTLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVS 121
NI P LT NL L I N + + + L +LS L L
Sbjct: 143 NISPLAGLT------NLQYLSI---GNAQV-----------SDLTPLANLSKLTTLKADD 182
Query: 122 LGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELS 181
+ P +A +L ++L +N +S P +++ NL + L + T +
Sbjct: 183 NKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQPVFYNN 238
Query: 182 LLQVLSVLSLKNNSL 196
L V +V+ + +
Sbjct: 239 NLVVPNVVKGPSGAP 253
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 74.2 bits (183), Expect = 3e-15
Identities = 30/135 (22%), Positives = 65/135 (48%), Gaps = 4/135 (2%)
Query: 107 TLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLI 166
T ++SL ++L ++ + L G I ++ +++ L +++ + + P IS L NL+ L
Sbjct: 39 TEAQMNSLTYITLANINVTD-LTG-IEYAHNIKDLTINNIHATNYNP--ISGLSNLERLR 94
Query: 167 LDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD 226
+ T LS L L++L + +++ + + L + + LS N +I
Sbjct: 95 IMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMP 154
Query: 227 LRNLKNLRVFDVQDN 241
L+ L L+ ++Q +
Sbjct: 155 LKTLPELKSLNIQFD 169
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 7e-14
Identities = 33/206 (16%), Positives = 72/206 (34%), Gaps = 30/206 (14%)
Query: 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNK 171
S+ K LG + A +SL + L++ ++ I N++ L +++
Sbjct: 20 STFKAYLNGLLGQSSTANITEAQMNSLTYITLANINVTDLTG--IEYAHNIKDLTINNIH 77
Query: 172 FTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSG-EIPDLRNL 230
T + +S L L L + ++ +L+GL SL ++ +S + + + L
Sbjct: 78 ATNY--NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTL 135
Query: 231 KNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFV 290
+ D+ N +T + L++ +L+ L+I +
Sbjct: 136 PKVNSIDLSYN-----------GAIT------------DIMPLKTLPELKSLNIQFDGVH 172
Query: 291 GPFIPSLLSLPSITYLDIHGNKLTGL 316
+ P + L + G
Sbjct: 173 D--YRGIEDFPKLNQLYAFSQTIGGK 196
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 7e-12
Identities = 26/147 (17%), Positives = 62/147 (42%), Gaps = 17/147 (11%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSS 136
N+ L I NN + T ++ + LS+L+ L ++ + +++ +
Sbjct: 67 NIKDLTI---NNIHA-----------TNYNPISGLSNLERLRIMGKDVTSDKIPNLSGLT 112
Query: 137 SLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSL 196
SL +L++S + SI +I++L + ++ L N + L L L L+++ + +
Sbjct: 113 SLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDI-MPLKTLPELKSLNIQFDGV 171
Query: 197 SGFLPVSLTGLQSLRVVSLSANHLSGE 223
+ + L + + + G+
Sbjct: 172 HDYRG--IEDFPKLNQLYAFSQTIGGK 196
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 3e-11
Identities = 30/205 (14%), Positives = 77/205 (37%), Gaps = 30/205 (14%)
Query: 136 SSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNS 195
S+ + S + + + + +L + L + T + + + L++ N
Sbjct: 20 STFKAYLNGLLGQSSTANITEAQMNSLTYITLANINVTDL--TGIEYAHNIKDLTINNIH 77
Query: 196 LSGFLPVSLTGLQSLRVVSLSANHLSGE-IPDLRNLKNLRVFDVQDNYFGPRFPRLHKKM 254
+ + P ++GL +L + + ++ + IP+L L +L
Sbjct: 78 ATNYNP--ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT-------------------- 115
Query: 255 VTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLT 314
L + ++ ++ + ++ +D+S N + I L +LP + L+I + +
Sbjct: 116 -LLDISHSAHD-DSILTKINTLPKVNSIDLSYNGAIT-DIMPLKTLPELKSLNIQFDGVH 172
Query: 315 GLLLQNMSCNPQLAFVDLSSNLLTG 339
+ + P+L + S + G
Sbjct: 173 D--YRGIEDFPKLNQLYAFSQTIGG 195
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 77.8 bits (192), Expect = 3e-15
Identities = 55/264 (20%), Positives = 98/264 (37%), Gaps = 36/264 (13%)
Query: 76 DNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHS 135
DN A + + L++L L + + + G I
Sbjct: 18 DNFASEVAAAFEMQATD------------TISEEQLATLTSLDCHNSSI-TDMTG-IEKL 63
Query: 136 SSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNS 195
+ L L +SN ++ ++ +S NL L D NK T +++ L L+ L+ N
Sbjct: 64 TGLTKLICTSNNIT-TLD--LSQNTNLTYLACDSNKLTN---LDVTPLTKLTYLNCDTNK 117
Query: 196 LSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLH-KKM 254
L+ + ++ L ++ + N L+ EI D+ + L D N + ++
Sbjct: 118 LT---KLDVSQNPLLTYLNCARNTLT-EI-DVSHNTQLTELDCHLNKKITKLDVTPQTQL 172
Query: 255 VTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLT 314
TL N+ + ++ L +L+ N L +T+LD NKLT
Sbjct: 173 TTLDCSFNK----ITELDVSQNKLLNRLNCDTNNITK---LDLNQNIQLTFLDCSSNKLT 225
Query: 315 GLLLQNMSCNPQLAFVDLSSNLLT 338
+ + QL + D S N LT
Sbjct: 226 EIDVTP---LTQLTYFDCSVNPLT 246
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 68.2 bits (167), Expect = 4e-12
Identities = 48/304 (15%), Positives = 89/304 (29%), Gaps = 32/304 (10%)
Query: 62 NIEPTPSLT-LVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLS-- 118
++ LT L C+ + + N T+ S L+ L +
Sbjct: 143 DVSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITELDVSQNKLLNRLNCDTNN 202
Query: 119 LVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPS 178
+ L + + L L+ SSN L+ I ++ L L N T
Sbjct: 203 ITKL--------DLNQNIQLTFLDCSSNKLT-EID--VTPLTQLTYFDCSVNPLT---EL 248
Query: 179 ELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDV 238
++S L L+ L L + LT L + D+ + L + D
Sbjct: 249 DVSTLSKLTTLHCIQTDLLE---IDLTHNTQLIYFQAEGCRKI-KELDVTHNTQLYLLDC 304
Query: 239 QDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLL 298
Q + K+V L L N L+ +L+ L S+
Sbjct: 305 QAAGITELDLSQNPKLVYLYLNNTELT-ELDVSHN---TKLKSLSCVNAHIQD--FSSVG 358
Query: 299 SLPSITYLDIHGNKLTGLLLQNMSCNPQLAFV-----DLSSNLLTGYLPSCLQVEAKTRL 353
+P++ + + + ++ N V D N + + T
Sbjct: 359 KIPALNNNFEAEGQTITMPKETLTNNSLTIAVSPDLLDQFGNPMNIEPGDGGVYDQATNT 418
Query: 354 VLYS 357
+ +
Sbjct: 419 ITWE 422
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 75.5 bits (186), Expect = 5e-15
Identities = 53/272 (19%), Positives = 100/272 (36%), Gaps = 46/272 (16%)
Query: 494 GQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYH--IELISKLRHSNLVSALGHCLDFSL 550
+YKG VA L+ K + + E++ L+H N+V
Sbjct: 40 KTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVK 99
Query: 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFS 610
I + + E + TL++++ + + I+KG+QFLHT P +
Sbjct: 100 GKKCIVL---VTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHTR-TPPIIH 154
Query: 611 NNLKITDVLLD-ENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSV----------LAR 659
+LK ++ + VKI G A + + +V +
Sbjct: 155 RDLKCDNIFITGPTGSVKIGDL-----------GLATLKRASFAKAVIGTPEFMAPEMYE 203
Query: 660 TEQDDKSDVYDIGIILIEIIVGRPITSE--NVVVLVKDLLQVNIGTDEARKSIVDPAVMN 717
+ D+ DVY G+ ++E+ SE N + + T + PA +
Sbjct: 204 EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYR------RVTSGVK-----PASFD 252
Query: 718 ECSDESLKRMMELCLRCLSNEPKDRPSVEDTL 749
+ + +K ++E C+R +R S++D L
Sbjct: 253 KVAIPEVKEIIEGCIR---QNKDERYSIKDLL 281
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 75.9 bits (186), Expect = 2e-14
Identities = 52/327 (15%), Positives = 104/327 (31%), Gaps = 37/327 (11%)
Query: 106 STLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTL 165
+ + +L + + +S++ + +++ + S+ I L N+ L
Sbjct: 15 FPDDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKL 70
Query: 166 ILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIP 225
L+ NK T L+ L+ L L L N + SL L+ L+ +SL N +S +I
Sbjct: 71 FLNGNKLTDI--KPLTNLKNLGWLFLDENKIKDL--SSLKDLKKLKSLSLEHNGIS-DIN 125
Query: 226 DLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDIS 285
L +L L +L L NN+ + L +L L +
Sbjct: 126 GLVHLPQLE---------------------SLYLGNNKIT---DITVLSRLTKLDTLSLE 161
Query: 286 LNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCL 345
N+ I L L + L + N ++ L+ ++ L ++L S +
Sbjct: 162 DNQISD--IVPLAGLTKLQNLYLSKNHISD--LRALAGLKNLDVLELFSQECLNKPINHQ 217
Query: 346 QVEAKTRLVLYSKNCLSNEEQEQHPSNFCQNEALAVKVLPHKQKNKSSYASSVVGGTVGG 405
V + L E ++ + + + Y +G
Sbjct: 218 SNLVVPNTVKNTDGSLVTPEIISDDGDYEKPNVKWHLPEFTNEVSFIFYQPVTIGKAKAR 277
Query: 406 IAVVGAVLLVVKKVYNKNNNKVETTST 432
L + + + +
Sbjct: 278 FHGRVTQPLKEVYTVSYDVDGTVIKTK 304
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 67.8 bits (165), Expect = 6e-12
Identities = 56/235 (23%), Positives = 94/235 (40%), Gaps = 23/235 (9%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSS 136
N+T+L + N N + T L +L +L L L + L +
Sbjct: 66 NVTKLFL---NGNKL-----------TDIKPLTNLKNLGWLFLDENKIKD-LSS-LKDLK 109
Query: 137 SLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSL 196
L+ L+L N +S I + L L++L L +NK T + LS L L LSL++N +
Sbjct: 110 KLKSLSLEHNGIS-DING-LVHLPQLESLYLGNNKIT--DITVLSRLTKLDTLSLEDNQI 165
Query: 197 SGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVT 256
S +P L GL L+ + LS NH+S ++ L LKNL V ++ + +V
Sbjct: 166 SDIVP--LAGLTKLQNLYLSKNHIS-DLRALAGLKNLDVLELFSQECLNKPINHQSNLVV 222
Query: 257 LVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGN 311
N + P+ + +K ++ + S + +T
Sbjct: 223 PNTVKNTDGSLVTPEIISDDGDYEKPNVKWHLPEFTNEVSFIFYQPVTIGKAKAR 277
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 75.3 bits (185), Expect = 3e-14
Identities = 63/315 (20%), Positives = 113/315 (35%), Gaps = 19/315 (6%)
Query: 4 PVDKLHLLVFIILSIIVSAPHSNQLQLFQYQTLVRIQQLLNYPSVSSSFNTTTVTDFCNI 63
P + V + ++ + SN ++L + L + N T
Sbjct: 205 PNSLFSVQVNMSVNALGHLQLSN-IKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTW 263
Query: 64 EPTPSLTLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLG 123
+ + L + + L+I N I + F + +L SL + + +
Sbjct: 264 KCSVKLFQFFWPRPVEYLNI---YNLTITE----RIDREEFTYSETALKSLMIEHVKNQV 316
Query: 124 LWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLL 183
+ + + I LS + V S + L N FT +V S L
Sbjct: 317 FLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTL 376
Query: 184 QVLSVLSLKNNSLSGFLPVS--LTGLQSLRVVSLSANHLSGEIPDL--RNLKNLRVFDVQ 239
+ L L L+ N L F V+ + SL + +S N L+ D +++ V ++
Sbjct: 377 KRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLS 436
Query: 240 DNYFGPR-FPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIP--S 296
N F L K+ L L NNR P ++ LQ+L+++ N+ +P
Sbjct: 437 SNMLTGSVFRCLPPKVKVLDLHNNRIMS--IPKDVTHLQALQELNVASNQLK--SVPDGV 492
Query: 297 LLSLPSITYLDIHGN 311
L S+ Y+ +H N
Sbjct: 493 FDRLTSLQYIWLHDN 507
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 59.1 bits (143), Expect = 4e-09
Identities = 57/351 (16%), Positives = 117/351 (33%), Gaps = 25/351 (7%)
Query: 6 DKLHLLVFIILSI--IVSAPHSN--QLQLFQYQTLVRIQQLLNYPSVSSSFNTTTVTDFC 61
L L F+ LS L L + + + S TTV
Sbjct: 143 GNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLV 202
Query: 62 NIEPTPSLTLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVS 121
SL V ++ L +N +N + TF S L +L ++L
Sbjct: 203 F--HPNSLFSVQVNMSVNALGHLQLSNIKLND--ENCQRLMTFLSELTRGPTLLNVTLQH 258
Query: 122 LGLWGPLPGSIAHS---SSLEILNLSSNYLSGSIPVQI-----SSLRNLQTLILDDNKFT 173
+ + +E LN+ + ++ I + ++L++L + + F
Sbjct: 259 IETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFL 318
Query: 174 GAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKN 232
+ + S+ +++ L + V S ++ + N + + LK
Sbjct: 319 FSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKR 378
Query: 233 LRVFDVQDNYFG--PRFPRLHKKMVTLVLRNNR---FQFGLNPDELRSYNQLQKLDISLN 287
L+ +Q N + + K M +L + + L++S N
Sbjct: 379 LQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSN 438
Query: 288 RFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLT 338
G L P + LD+H N++ + ++++ L ++++SN L
Sbjct: 439 MLTGSVFRCLP--PKVKVLDLHNNRIMS-IPKDVTHLQALQELNVASNQLK 486
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 57.6 bits (139), Expect = 9e-09
Identities = 41/264 (15%), Positives = 86/264 (32%), Gaps = 21/264 (7%)
Query: 95 LAHN-FSTDTFFSTLGSLSSLKVLSLVSLGL-WGPLPGSIAHSSSLEILNLSSNYLSGSI 152
L+ N F G+L+ L L L + L S +L+L S ++ G
Sbjct: 128 LSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSYHIKGGE 187
Query: 153 PVQISSLRNLQTLILDDNKFTGAVPSELSLLQV----LSVLSLKNNSLSGFLPVSLTGLQ 208
+ ++ +V +S+ + LS + L + + + +
Sbjct: 188 TESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTR 247
Query: 209 SLRVVSLSANHLSGEIPDLR--------------NLKNLRVFDVQDNYFGPRFPRLHKKM 254
+++++ H+ N+ NL + + D K +
Sbjct: 248 GPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSL 307
Query: 255 VTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLT 314
+ ++N F F + ++ +S++ + S S T+L+ N T
Sbjct: 308 MIEHVKNQVFLF-SKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFT 366
Query: 315 GLLLQNMSCNPQLAFVDLSSNLLT 338
+ Q S +L + L N L
Sbjct: 367 DSVFQGCSTLKRLQTLILQRNGLK 390
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 51.8 bits (124), Expect = 6e-07
Identities = 41/208 (19%), Positives = 69/208 (33%), Gaps = 22/208 (10%)
Query: 136 SSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNS 195
+++ S+ L+ +P + + L L N + ++S L L VL L +N
Sbjct: 31 ELESMVDYSNRNLT-HVPKDLPP--RTKALSLSQNSISELRMPDISFLSELRVLRLSHNR 87
Query: 196 LSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYF-----GPRFPRL 250
+ Q L + +S N L I + +LR D+ N F F L
Sbjct: 88 IRSLDFHVFLFNQDLEYLDVSHNRLQ-NISC-CPMASLRHLDLSFNDFDVLPVCKEFGNL 145
Query: 251 HKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHG 310
K+ L L +F+ +L L I L+ + +
Sbjct: 146 -TKLTFLGLSAAKFRQL----DLLPVAHLHLSCILLD-------LVSYHIKGGETESLQI 193
Query: 311 NKLTGLLLQNMSCNPQLAFVDLSSNLLT 338
T L L + V++S N L
Sbjct: 194 PNTTVLHLVFHPNSLFSVQVNMSVNALG 221
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 49.9 bits (119), Expect = 2e-06
Identities = 38/215 (17%), Positives = 72/215 (33%), Gaps = 22/215 (10%)
Query: 129 PGSIAHSSSLEILNLSSNYLSGSIPVQI-SSLRNLQTLILDDNKFTGAVPSELSLLQVLS 187
I+ S L +L LS N + S+ + ++L+ L + N+ + + L
Sbjct: 69 MPDISFLSELRVLRLSHNRIR-SLDFHVFLFNQDLEYLDVSHNRLQ-NISC--CPMASLR 124
Query: 188 VLSLKNNSLSGFLPVS--LTGLQSLRVVSLSANHL-SGEIPDLRNLK------NLRVFDV 238
L L N LPV L L + LSA ++ + +L +L + +
Sbjct: 125 HLDLSFNDFDV-LPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSYHI 183
Query: 239 QDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLL 298
+ + ++ LV N + + LQ +I LN +
Sbjct: 184 KGGETE-SLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDE------NCQ 236
Query: 299 SLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLS 333
L + G L + LQ++ + +
Sbjct: 237 RLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQ 271
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 71.6 bits (176), Expect = 9e-14
Identities = 45/282 (15%), Positives = 96/282 (34%), Gaps = 44/282 (15%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYH-IELISKLRHSNLVSALGHCLD-- 547
G +++ K D AI+ +++ + ++ ++KL H +V L+
Sbjct: 17 GFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKN 76
Query: 548 ---FSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIA--IVKGVQFLHT 602
+Y+ + E L+ +++G + + I I + V+FLH+
Sbjct: 77 TTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHS 136
Query: 603 -GIV-----PG-VF---SNNLKITD-----VLLDENFHVKINSYNLPLLAEARGKGSAEV 647
G++ P +F + +K+ D + + + + G+
Sbjct: 137 KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLY 196
Query: 648 SSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEAR 707
SP + K D++ +G+IL E++ T V + D+ R
Sbjct: 197 MSP----EQIHGNSYSHKVDIFSLGLILFELLY-PFSTQMERVRTLTDV----------R 241
Query: 708 KSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTL 749
P + E + LS P +RP + +
Sbjct: 242 NLKFPPLFTQKYPCEY-----VMVQDMLSPSPMERPEAINII 278
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 73.0 bits (179), Expect = 1e-13
Identities = 55/312 (17%), Positives = 111/312 (35%), Gaps = 19/312 (6%)
Query: 8 LHLLVFIILSIIVSAPHSN-QLQLFQYQTLVRIQQLLNYPSVSSSFNTTTVTDFCNIEPT 66
H ++ + + + + SN + L + + L + N T
Sbjct: 178 FHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSF 237
Query: 67 PSLTLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWG 126
+ + + + I +N + G F + SL +L + +VS
Sbjct: 238 IRILQLVWHTTVWYFSI---SNVKLQG----QLDFRDFDYSGTSLKALSIHQVVSDVFGF 290
Query: 127 PLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVL 186
P S++ I N + + + S + L +N T V L L
Sbjct: 291 PQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTEL 350
Query: 187 SVLSLKNNSLSGFLPVS--LTGLQSLRVVSLSANHLSGEIPD--LRNLKNLRVFDVQDNY 242
L L+ N L ++ T ++SL+ + +S N +S + K+L ++ N
Sbjct: 351 ETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNI 410
Query: 243 FGPR-FPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIP--SLLS 299
F L ++ L L +N+ + P ++ LQ+L+++ N+ +P
Sbjct: 411 LTDTIFRCLPPRIKVLDLHSNKIKSI--PKQVVKLEALQELNVASNQLK--SVPDGIFDR 466
Query: 300 LPSITYLDIHGN 311
L S+ + +H N
Sbjct: 467 LTSLQKIWLHTN 478
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 69.9 bits (171), Expect = 1e-12
Identities = 53/340 (15%), Positives = 109/340 (32%), Gaps = 29/340 (8%)
Query: 11 LVFIILSIIVSAPHSNQLQLFQYQTLVRIQQLLNYPSVSSSFNTTTVTDFCNIEPTPSLT 70
++ ++ LQ F ++L + + TV + L
Sbjct: 143 VLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLE 202
Query: 71 LVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSL---SSLKVLSLVSLGLWGP 127
L+ L N N L + +T F + L +++ S+ ++ L G
Sbjct: 203 DNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQ 262
Query: 128 LPGSIAHSS-----SLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSL 182
L S +L I + S+ N+ + S
Sbjct: 263 LDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSK 322
Query: 183 LQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDL----RNLKNLRVFDV 238
+ L NN L+ + + L L + L N L E+ + +K+L+ D+
Sbjct: 323 ISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLK-ELSKIAEMTTQMKSLQQLDI 381
Query: 239 QDNYFGPRFPRLH----KKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFI 294
N + K +++L + +N + +++ LD+ N+
Sbjct: 382 SQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPP---RIKVLDLHSNKIKS-IP 437
Query: 295 PSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSS 334
++ L ++ L++ N+L + P F L+S
Sbjct: 438 KQVVKLEALQELNVASNQLKSV--------PDGIFDRLTS 469
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 64.5 bits (157), Expect = 7e-11
Identities = 45/326 (13%), Positives = 100/326 (30%), Gaps = 25/326 (7%)
Query: 24 HSNQLQLFQYQTLVRIQQLLNYPSVSSSFNTTTVTDFCNIEPTPSLTLVCYEDNLTQLHI 83
+ L+ + + + ++ E L N LHI
Sbjct: 123 STTHLEKSSVLPIAHLNISKVLLVLGETY--------GEKEDPEGLQDF----NTESLHI 170
Query: 84 AGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNL 143
N + L + T L+ + S+L + N+
Sbjct: 171 VFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNI 230
Query: 144 SSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSEL-----SLLQVLSVLSLKNNSLSG 198
+ + S +Q+ + + + K G + + L+ LS+ + ++
Sbjct: 231 ETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGF 290
Query: 199 FLPVSLTGLQSLRVVSLSANHL-SGEIPDLRNLKNLRVFDVQDNYFG---PRFPRLHKKM 254
++ + + + + + + D +N ++
Sbjct: 291 PQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTEL 350
Query: 255 VTLVLRNNRFQ-FGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLS-LPSITYLDIHGNK 312
TL+L+ N+ + + LQ+LDIS N S S+ L++ N
Sbjct: 351 ETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNI 410
Query: 313 LTGLLLQNMSCNPQLAFVDLSSNLLT 338
LT + + + P++ +DL SN +
Sbjct: 411 LTDTIFRCLP--PRIKVLDLHSNKIK 434
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 61.4 bits (149), Expect = 5e-10
Identities = 36/226 (15%), Positives = 68/226 (30%), Gaps = 14/226 (6%)
Query: 140 ILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGF 199
+++ S N L +P +S L + N + S++ L L +L + +N +
Sbjct: 4 LVDRSKNGLI-HVPKDLSQ--KTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYL 60
Query: 200 LPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYF-----GPRFPRLHKKM 254
Q L + LS N L +I NL+ D+ N F F + ++
Sbjct: 61 DISVFKFNQELEYLDLSHNKLV-KIS-CHPTVNLKHLDLSFNAFDALPICKEFGNM-SQL 117
Query: 255 VTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLT 314
L L + + + N + L + + L +H T
Sbjct: 118 KFLGLSTTHLE-KSSVLPIAHLNISKVLLVLGETYGEK--EDPEGLQDFNTESLHIVFPT 174
Query: 315 GLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNC 360
+ +L + + L + L N
Sbjct: 175 NKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNP 220
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 60.6 bits (147), Expect = 1e-09
Identities = 41/213 (19%), Positives = 69/213 (32%), Gaps = 13/213 (6%)
Query: 135 SSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNN 194
S ILN+S NY+S I SL L+ LI+ N+ S Q L L L +N
Sbjct: 20 SQKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79
Query: 195 SLSGFLPVSLTGLQSLRVVSLSANHLS--GEIPDLRNLKNLRVFDVQDNYFG----PRFP 248
L +S +L+ + LS N + N+ L+ + +
Sbjct: 80 KLVK---ISCHPTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIA 136
Query: 249 RLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDI 308
L+ V LVL ++ + + +L + T ++
Sbjct: 137 HLNISKVLLVLGETY----GEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANL 192
Query: 309 HGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYL 341
+ + +L N L +N L
Sbjct: 193 ELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNL 225
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 58.7 bits (142), Expect = 4e-09
Identities = 42/267 (15%), Positives = 85/267 (31%), Gaps = 25/267 (9%)
Query: 95 LAHN-FSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEI-LNLSSNYLSGSI 152
L+ N F G++S LK L L + L IAH + ++ L L Y
Sbjct: 97 LSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKED 156
Query: 153 PVQISSLR--NLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQ-- 208
P + +L + + +F + + + L + ++K L+ L
Sbjct: 157 PEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKL 216
Query: 209 ---------SLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFG-----PRFPRLHKKM 254
+L + + N I L + F + + F +
Sbjct: 217 QTNPKLSNLTLNNIETTWNSFI-RILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSL 275
Query: 255 VTLVLR---NNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGN 311
L + ++ F F ++ + + +++ + + +LD N
Sbjct: 276 KALSIHQVVSDVFGF-PQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNN 334
Query: 312 KLTGLLLQNMSCNPQLAFVDLSSNLLT 338
LT + +N +L + L N L
Sbjct: 335 LLTDTVFENCGHLTELETLILQMNQLK 361
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 55.3 bits (133), Expect = 4e-08
Identities = 41/260 (15%), Positives = 88/260 (33%), Gaps = 19/260 (7%)
Query: 129 PGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSV 188
I S L IL +S N + + L+ L L NK + L
Sbjct: 38 TSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKH 94
Query: 189 LSLKNNSLSGF-LPVSLTGLQSLRVVSLSANHL-SGEIPDLRNLKNLRVFDVQDNYFGPR 246
L L N+ + + L+ + LS HL + + +L +V V +G +
Sbjct: 95 LDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEK 154
Query: 247 -----FPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVG------PFIP 295
+ + + +V N+ + +++ L+ +I +
Sbjct: 155 EDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA 214
Query: 296 SLLSLPSITYLDIHGNKLTG---LLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTR 352
L + P ++ L ++ + T + + + + + + +S+ L G L + T
Sbjct: 215 KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTS 274
Query: 353 LVLYSKNCLSNEEQEQHPSN 372
L S + + ++ S
Sbjct: 275 LKALSIHQVVSDVFGFPQSY 294
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 51.4 bits (123), Expect = 7e-07
Identities = 34/158 (21%), Positives = 61/158 (38%), Gaps = 11/158 (6%)
Query: 76 DNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGL-WGPLPGSIAH 134
+LT+L N + + SL+ L + + + G +
Sbjct: 345 GHLTELETLILQMNQLK-------ELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSW 397
Query: 135 SSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNN 194
+ SL LN+SSN L+ +I + ++ L L NK ++P ++ L+ L L++ +N
Sbjct: 398 TKSLLSLNMSSNILTDTIFRCL--PPRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASN 454
Query: 195 SLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKN 232
L L SL+ + L N P + L
Sbjct: 455 QLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSR 492
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 72.5 bits (178), Expect = 2e-13
Identities = 35/210 (16%), Positives = 73/210 (34%), Gaps = 19/210 (9%)
Query: 136 SSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSEL-SLLQVLSVLSLKNN 194
+ + ++LS N ++ S L++LQ L ++ + + L L +L L N
Sbjct: 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYN 89
Query: 195 SLSGFLPVSLTGLQSLRVVSLSANHL-SGEIPD--LRNLKNLRVFDVQDN-----YFGPR 246
+ GL +L V++L+ +L + + L +L + ++DN
Sbjct: 90 QFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASF 149
Query: 247 FPRLHKKMVTLVLRNNRFQ-------FGLNPDELR--SYNQLQKLDISLNRFVGPFIPSL 297
F + ++ L L N+ + + + D++ +
Sbjct: 150 FLNM-RRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNP 208
Query: 298 LSLPSITYLDIHGNKLTGLLLQNMSCNPQL 327
SIT LD+ GN + +
Sbjct: 209 FKNTSITTLDLSGNGFKESMAKRFFDAIAG 238
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 68.6 bits (168), Expect = 3e-12
Identities = 49/266 (18%), Positives = 92/266 (34%), Gaps = 34/266 (12%)
Query: 106 STLGSLSSLKVLSLVSLGLWGPLP-GSIAHSSSLEILNLSSNYLSGSIPVQI-SSLRNLQ 163
++ L L+ L + + + SSL IL L N + + L NL+
Sbjct: 48 TSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFL-QLETGAFNGLANLE 106
Query: 164 TLILDDNKFTGAVPSE--LSLLQVLSVLSLKNNSLSGFLPVSL-TGLQSLRVVSLSANHL 220
L L GAV S L L +L L++N++ P S ++ V+ L+ N +
Sbjct: 107 VLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKV 166
Query: 221 SG--------------EIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQF 266
+ L ++ + + + P + + TL L N F+
Sbjct: 167 KSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKE 226
Query: 267 GLNP--DELRSYNQLQKLDISLNRFVGPFIPSL------------LSLPSITYLDIHGNK 312
+ + + ++Q L +S + +G L + D+ +K
Sbjct: 227 SMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSK 286
Query: 313 LTGLLLQNMSCNPQLAFVDLSSNLLT 338
+ LL S L + L+ N +
Sbjct: 287 IFALLKSVFSHFTDLEQLTLAQNEIN 312
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 1e-09
Identities = 27/158 (17%), Positives = 52/158 (32%), Gaps = 27/158 (17%)
Query: 186 LSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD--LRNLKNLRVFDVQDNYF 243
++ + L NS++ S + LQ L+ + + I + R L +L
Sbjct: 32 VNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLI--------- 82
Query: 244 GPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIP--SLLSLP 301
L L N+F L L+ L ++ G + L
Sbjct: 83 ------------ILKLDYNQFLQ-LETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLT 129
Query: 302 SITYLDIHGNKLTGLLLQNMSCN-PQLAFVDLSSNLLT 338
S+ L + N + + + N + +DL+ N +
Sbjct: 130 SLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVK 167
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 59.0 bits (143), Expect = 3e-09
Identities = 47/296 (15%), Positives = 86/296 (29%), Gaps = 70/296 (23%)
Query: 76 DNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSI--- 132
LT L + +NNI +FF ++ VL L + +
Sbjct: 126 KPLTSLEMLVLRDNNI-----KKIQPASFFL---NMRRFHVLDL-TFNKVKSICEEDLLN 176
Query: 133 AHSSSLEILNLSSNYLSGSIPVQISS--------LRNLQTLILDDNKFTGAVPSELSLLQ 184
+L LSS L + ++ TL L N F ++
Sbjct: 177 FQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAI 236
Query: 185 VLSVL-------------SLKNNSLSGFLPVSLTGLQ--SLRVVSLSANHLSGEIPD--L 227
+ + S + + + GL+ ++ LS + + +
Sbjct: 237 AGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIF-ALLKSVF 295
Query: 228 RNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLN 287
+ +L L L N ++ + L KL++S N
Sbjct: 296 SHFTDLEQ---------------------LTLAQNEINK-IDDNAFWGLTHLLKLNLSQN 333
Query: 288 RFVGPFIPSLL--SLPSITYLDIHGNKLTGL---LLQNMSCNPQLAFVDLSSNLLT 338
I S + +L + LD+ N + L + P L + L +N L
Sbjct: 334 FLGS--IDSRMFENLDKLEVLDLSYNHIRALGDQSFLGL---PNLKELALDTNQLK 384
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 5e-09
Identities = 43/246 (17%), Positives = 76/246 (30%), Gaps = 37/246 (15%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSS 136
L+ + + N + N +T +TL LS ++ + + G+ S
Sbjct: 186 RLSSITLQDMNEYWLGWEKCGNPFKNTSITTL-DLSGNGFKESMAKRFFDAIAGTKIQSL 244
Query: 137 SLEILNLSSNYLSGSIPVQISSL-------RNLQTLILDDNKFTGAVPSELSLLQVLSVL 189
L + + + ++T L +K + S S L L
Sbjct: 245 ILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQL 304
Query: 190 SLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD--LRNLKNLRVFDVQDNYFGPRF 247
+L N ++ + GL L ++LS N L I NL L
Sbjct: 305 TLAQNEINKIDDNAFWGLTHLLKLNLSQNFLG-SIDSRMFENLDKLE------------- 350
Query: 248 PRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPS--LLSLPSITY 305
L L N + L L++L + N+ +P L S+
Sbjct: 351 --------VLDLSYNHIR-ALGDQSFLGLPNLKELALDTNQLK--SVPDGIFDRLTSLQK 399
Query: 306 LDIHGN 311
+ +H N
Sbjct: 400 IWLHTN 405
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 70.4 bits (173), Expect = 2e-13
Identities = 42/196 (21%), Positives = 78/196 (39%), Gaps = 19/196 (9%)
Query: 129 PGSIAHSSSLEILNLSSNYLSGSIPVQI-SSLRNLQTLILDDNKFTGAVPSEL-SLLQVL 186
S L++L+LS + +I SL +L TLIL N ++ S L L
Sbjct: 45 SYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGNPIQ-SLALGAFSGLSSL 102
Query: 187 SVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHL-SGEIPDL-RNLKNLRVFDVQDNYFG 244
L +L+ + L++L+ ++++ N + S ++P+ NL NL D+ N
Sbjct: 103 QKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ 162
Query: 245 -------PRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPS- 296
++ ++L L N F +L++L + N+ +P
Sbjct: 163 SIYCTDLRVLHQMPLLNLSLDLSLNPMNF--IQPGAFKEIRLKELALDTNQL--KSVPDG 218
Query: 297 -LLSLPSITYLDIHGN 311
L S+ + +H N
Sbjct: 219 IFDRLTSLQKIWLHTN 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 1e-07
Identities = 34/149 (22%), Positives = 54/149 (36%), Gaps = 17/149 (11%)
Query: 76 DNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWG-PLPGSIAH 134
L+ L N+ + G L +LK L++ + LP ++
Sbjct: 97 SGLSSLQKLVAVETNL-----ASLENFPI----GHLKTLKELNVAHNLIQSFKLPEYFSN 147
Query: 135 SSSLEILNLSSNYLSGSIPVQI-SSLRNLQ----TLILDDNKFTGAVPSELSLLQVLSVL 189
++LE L+LSSN + SI L + +L L N P ++ L L
Sbjct: 148 LTNLEHLDLSSNKIQ-SIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIR-LKEL 205
Query: 190 SLKNNSLSGFLPVSLTGLQSLRVVSLSAN 218
+L N L L SL+ + L N
Sbjct: 206 ALDTNQLKSVPDGIFDRLTSLQKIWLHTN 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 2e-06
Identities = 35/201 (17%), Positives = 63/201 (31%), Gaps = 21/201 (10%)
Query: 151 SIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSL-TGLQS 209
IP + + + L L N L VL L + + L
Sbjct: 21 KIPDNLPF--STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSH 77
Query: 210 LRVVSLSANHLSGEIPD--LRNLKNLRVFDVQDNYF-----GPRFPRLHKKMVTLVLRNN 262
L + L+ N + + L +L+ + P L + L + +N
Sbjct: 78 LSTLILTGNPIQ-SLALGAFSGLSSLQKLVAVETNLASLENFP-IGHLK-TLKELNVAHN 134
Query: 263 RFQFGLNPDELRSYNQLQKLDISLNRF----VGPFIPSLLSLPSITY-LDIHGNKLTGLL 317
Q P+ + L+ LD+S N+ L +P + LD+ N + +
Sbjct: 135 LIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDL-RVLHQMPLLNLSLDLSLNPMNF-I 192
Query: 318 LQNMSCNPQLAFVDLSSNLLT 338
+L + L +N L
Sbjct: 193 QPGAFKEIRLKELALDTNQLK 213
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 3e-13
Identities = 58/301 (19%), Positives = 107/301 (35%), Gaps = 68/301 (22%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550
GQ++K K DG I+ +K + + + ++ ++KL H N+V G F
Sbjct: 23 GFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIVHYNGCWDGFDY 78
Query: 551 DDPSISI---------IYLIFEYAPNETLRSFISG-PGYKLTWVQRIAAAIAIVKGVQFL 600
D + S +++ E+ TL +I G KL V + I KGV ++
Sbjct: 79 DPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYI 138
Query: 601 HTGIVPGVFSNN-----LKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTS 655
H S LK +++ L + VKI + L + + K+T
Sbjct: 139 H--------SKKLINRDLKPSNIFLVDTKQVKIGDFGL----------VTSLKNDGKRTR 180
Query: 656 -----------VLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTD 704
++ + + D+Y +G+IL E++ E
Sbjct: 181 SKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTD---------- 230
Query: 705 EARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQGLKEN 764
+ D + + + L + LS +P+DRP+ + L L + E
Sbjct: 231 -----LRDGIISDIFDKK----EKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKNER 281
Query: 765 N 765
+
Sbjct: 282 H 282
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 68.2 bits (167), Expect = 1e-12
Identities = 38/205 (18%), Positives = 82/205 (40%), Gaps = 17/205 (8%)
Query: 136 SSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNS 195
+ NL ++ ++ + L ++ +I +++ + L ++ L L N
Sbjct: 24 AETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNK 79
Query: 196 LSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFG--PRFPRLHKK 253
L+ P L L++L + L N + ++ L++LK L+ ++ N L +
Sbjct: 80 LTDIKP--LANLKNLGWLFLDENKVK-DLSSLKDLKKLKSLSLEHNGISDINGLVHL-PQ 135
Query: 254 MVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKL 313
+ +L L NN+ + L +L L + N+ I L L + L + N +
Sbjct: 136 LESLYLGNNKIT---DITVLSRLTKLDTLSLEDNQISD--IVPLAGLTKLQNLYLSKNHI 190
Query: 314 TGLLLQNMSCNPQLAFVDLSSNLLT 338
+ L+ ++ L ++L S
Sbjct: 191 SD--LRALAGLKNLDVLELFSQECL 213
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 65.5 bits (160), Expect = 9e-12
Identities = 47/234 (20%), Positives = 91/234 (38%), Gaps = 15/234 (6%)
Query: 106 STLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTL 165
+ + + +L + + +S++ + +++ + S+ I L N+ L
Sbjct: 18 FSDDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKL 73
Query: 166 ILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIP 225
L+ NK T L+ L+ L L L N + SL L+ L+ +SL N +S +I
Sbjct: 74 FLNGNKLT--DIKPLANLKNLGWLFLDENKVKDL--SSLKDLKKLKSLSLEHNGIS-DIN 128
Query: 226 DLRNLKNLRVFDVQDNY-FGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDI 284
L +L L + +N K+ TL L +N+ + L +LQ L +
Sbjct: 129 GLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQIS---DIVPLAGLTKLQNLYL 185
Query: 285 SLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLT 338
S N + +L L ++ L++ + + + S V + L
Sbjct: 186 SKNHISD--LRALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLV 237
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 1e-10
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 23/211 (10%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSS 136
N+T+L + N N + T L +L +L L L + +
Sbjct: 69 NVTKLFL---NGNKL-----------TDIKPLANLKNLGWLFLDENKVKDLSS--LKDLK 112
Query: 137 SLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSL 196
L+ L+L N +S I + L L++L L +NK T + LS L L LSL++N +
Sbjct: 113 KLKSLSLEHNGIS-DING-LVHLPQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQI 168
Query: 197 SGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVT 256
S +P L GL L+ + LS NH+S ++ L LKNL V ++ + +V
Sbjct: 169 SDIVP--LAGLTKLQNLYLSKNHIS-DLRALAGLKNLDVLELFSQECLNKPINHQSNLVV 225
Query: 257 LVLRNNRFQFGLNPDELRSYNQLQKLDISLN 287
N + P+ + +K ++ +
Sbjct: 226 PNTVKNTDGSLVTPEIISDDGDYEKPNVKWH 256
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 2e-04
Identities = 33/153 (21%), Positives = 55/153 (35%), Gaps = 28/153 (18%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSL-----VSLGLWGPLPGS 131
L L++ NN I T + L L+ L LSL +
Sbjct: 135 QLESLYL---GNNKI-----------TDITVLSRLTKLDTLSLEDNQISDIV-------P 173
Query: 132 IAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL 191
+A + L+ L LS N++S + ++ L+NL L L + + S L V + +
Sbjct: 174 LAGLTKLQNLYLSKNHIS-DLR-ALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKN 231
Query: 192 KNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEI 224
+ SL +S G V + E+
Sbjct: 232 TDGSLVTPEIISDDGDYEKPNVKWHLPEFTNEV 264
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 67.8 bits (166), Expect = 2e-12
Identities = 53/295 (17%), Positives = 99/295 (33%), Gaps = 67/295 (22%)
Query: 494 GQIYKGKLT-----DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDF 548
G + + G LVA++ L+ S + I+++ L +V G
Sbjct: 37 GSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYG- 95
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
+ L+ EY P+ LR F+ +L + + + I KG+++L
Sbjct: 96 PGRQS----LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG------- 144
Query: 609 FSNN-----LKITDVLLDENFHVKINSYNLPLLAEAR----GKGSAEVSSPAKK------ 653
S L ++L++ HVKI + L A+ K V P +
Sbjct: 145 -SRRCVHRDLAARNILVESEAHVKIADFGL-----AKLLPLDKDYYVVREPGQSPIFWYA 198
Query: 654 ---------TSVLARTEQDDKSDVYDIGIILIEIIV--GRPITSENVVVLVKDLLQVNIG 702
+ +SDV+ G++L E+ + + + + +
Sbjct: 199 PESLSDNIFSR---------QSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPA 249
Query: 703 TDEARKSIVD----PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
+ + + PA C E + +M C + P+DRPS L
Sbjct: 250 LSRLLELLEEGQRLPAPPA-CPAE-VHELM---KLCWAPSPQDRPSFSALGPQLD 299
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 65.6 bits (160), Expect = 1e-11
Identities = 44/280 (15%), Positives = 82/280 (29%), Gaps = 21/280 (7%)
Query: 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQI-SSLRNLQTL-ILDD 169
+ L V L G+ + LE + +S N + I + S+L L + I
Sbjct: 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89
Query: 170 NKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD--L 227
N P L L L + N + V ++ + N I
Sbjct: 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSF 149
Query: 228 RNL-KNLRVFDVQDNYF---GPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLD 283
L + + N + + NN + L D + LD
Sbjct: 150 VGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLEE-LPNDVFHGASGPVILD 208
Query: 284 ISLNRFVGPFIPS--LLSLPSITYLDIHGNK-------LTGLLLQNMSCNPQL-AFVDLS 333
IS R +PS L +L + + K L L+ +++ AF +
Sbjct: 209 ISRTRI--HSLPSYGLENLKKLRARSTYNLKKLPTLEKLVALMEASLTYPSHCCAFANWR 266
Query: 334 SNLLTGYLPSCLQVEAKTRLVLYSKNCLSNEEQEQHPSNF 373
+ + + + + + E + S++
Sbjct: 267 RQISELHPICNKSILRQEVDYMTQARGQRSSLAEDNESSY 306
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 64.8 bits (158), Expect = 3e-11
Identities = 34/191 (17%), Positives = 64/191 (33%), Gaps = 17/191 (8%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSS 136
L ++ I + NN+ + + F +L +L+ L + + G+ HS
Sbjct: 80 KLHEIRI--EKANNL-----LYINPEAF----QNLPNLQYLLISNTGIKHLPDVHKIHSL 128
Query: 137 SLEILNLSSNYLSGSIPVQISS--LRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNN 194
+L++ N +I L L+ N S + Q+ + NN
Sbjct: 129 QKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNN 188
Query: 195 SLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD--LRNLKNLRVFDVQDNYFGPRFPRLHK 252
+L G ++ +S + +P L NLK LR + P +L
Sbjct: 189 NLEELPNDVFHGASGPVILDISRTRIH-SLPSYGLENLKKLRARSTYNLKKLPTLEKLV- 246
Query: 253 KMVTLVLRNNR 263
++ L
Sbjct: 247 ALMEASLTYPS 257
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 55.6 bits (134), Expect = 2e-08
Identities = 40/240 (16%), Positives = 67/240 (27%), Gaps = 64/240 (26%)
Query: 137 SLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSL 196
S + + ++ IP + RN L K S L + + N +
Sbjct: 10 SNRVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDV 66
Query: 197 SGFLPVS--------------------------LTGLQSLRVVSLSANHLSGEIPDL--R 228
+ L +L+ + +S + +PD+
Sbjct: 67 LEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIK-HLPDVHKI 125
Query: 229 NLKNLRVFDVQDN----YFGPR-FPRLHKKMVTLVLRNNRFQF-------GLNPDELR-- 274
+ + D+QDN F L + V L L N Q G DEL
Sbjct: 126 HSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLS 185
Query: 275 SYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSS 334
N L++ + + F G LDI ++ L P +L
Sbjct: 186 DNNNLEE--LPNDVFHG--------ASGPVILDISRTRIHSL--------PSYGLENLKK 227
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 54.1 bits (130), Expect = 9e-08
Identities = 33/186 (17%), Positives = 63/186 (33%), Gaps = 39/186 (20%)
Query: 161 NLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHL 220
+ + + ++K T +PS+L + L L + +G L + +S N +
Sbjct: 10 SNRVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDV 66
Query: 221 SGEIPD--LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQ 278
I NL L + + + N + +NP+ ++
Sbjct: 67 LEVIEADVFSNLPKLH--------------EIR------IEKANNLLY-INPEAFQNLPN 105
Query: 279 LQKLDISLNRFVGPFIPSL--LSLPSITYLDIHGN-KLTGLLLQNMSCNPQLAFVDLSSN 335
LQ L IS +P + + LDI N + + + +FV LS
Sbjct: 106 LQYLLISNTGIK--HLPDVHKIHSLQKVLLDIQDNINIHTI--------ERNSFVGLSFE 155
Query: 336 LLTGYL 341
+ +L
Sbjct: 156 SVILWL 161
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 3e-11
Identities = 54/296 (18%), Positives = 106/296 (35%), Gaps = 53/296 (17%)
Query: 494 GQIYKGKLT-----DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDF 548
G + + G +VA++ L+ S + + IE++ L+H N+V G C
Sbjct: 55 GSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYS- 113
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
+ + LI EY P +LR ++ ++ ++ + I KG+++L
Sbjct: 114 AGRRN----LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG------- 162
Query: 609 FSNN-----LKITDVLLDENFHVKINSYNLPLLAEAR----GKGSAEVSSPAKK------ 653
+ L ++L++ VKI + L + K +V P +
Sbjct: 163 -TKRYIHRDLATRNILVENENRVKIGDFGL-----TKVLPQDKEYYKVKEPGESPIFWYA 216
Query: 654 -TSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQV---NIGTDEARKS 709
S+ SDV+ G++L E+ + ++ + + +
Sbjct: 217 PESLTESK-FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 275
Query: 710 IVD----PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ-FATQIQG 760
+ + P C DE + +M C +N RPS D + Q+ G
Sbjct: 276 LKNNGRLPRPDG-CPDE-IYMIM---TECWNNNVNQRPSFRDLALRVDQIRDQMAG 326
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 4e-11
Identities = 43/284 (15%), Positives = 101/284 (35%), Gaps = 45/284 (15%)
Query: 494 GQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD 552
+ + L DG A++ + ++ ++ H N++ + + +
Sbjct: 43 SYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAY---CLRER 99
Query: 553 PSISIIYLIFEYAPNETLRSFI---SGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVF 609
+ +L+ + TL + I G LT Q + + I +G++ +H G
Sbjct: 100 GAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA---KGYA 156
Query: 610 SNNLKITDVLLDENFHVKI----NSYNLPLLAEARGKGSAEVSSPAKKTS---------- 655
+LK T++LL + + + + E + A++ +
Sbjct: 157 HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFS 216
Query: 656 VLARTEQDDKSDVYDIGIILIEIIVGRP---ITSENVVVLVKDLLQVNIGTDEARKSIVD 712
V + D+++DV+ +G +L ++ G + + D + + + + + SI
Sbjct: 217 VQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG-----DSVALAV---QNQLSIPQ 268
Query: 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTL---WNLQ 753
S + +L ++ +P RP + L LQ
Sbjct: 269 SPRH---SSA----LWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 6e-11
Identities = 57/292 (19%), Positives = 95/292 (32%), Gaps = 52/292 (17%)
Query: 95 LAHNFSTDTFFSTLGS-LSSLKVLSLVSLGL----WGPLPGSIAHSSSLEILNLSSNYLS 149
+ +D ++ L L +V+ L GL + ++ + +L LNL SN L
Sbjct: 10 IQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELG 69
Query: 150 GSIPVQISSL-----RNLQTLILDDNKFT----GAVPSELSLLQVLSVLSLKNNSL--SG 198
+ +Q L L + T G + S L L L L L +N L +G
Sbjct: 70 DVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAG 129
Query: 199 FLPVSLTGLQ---SLRVVSLSANHLSGE-----IPDLRNLKNLRVFDVQDNYFGPR---- 246
+ L L + L LS LR + + V +N
Sbjct: 130 LQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRV 189
Query: 247 ----FPRLHKKMVTLVLRNNRFQFGLNPD-------ELRSYNQLQKLDISLNRF----VG 291
++ L L + G+ D + S L++L + N+ +
Sbjct: 190 LCQGLKDSPCQLEALKLESC----GVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMA 245
Query: 292 PFIPSLL-SLPSITYLDIHGNKLT----GLLLQNMSCNPQLAFVDLSSNLLT 338
P LL + L I +T G L + + L + L+ N L
Sbjct: 246 ELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELG 297
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 2e-10
Identities = 46/245 (18%), Positives = 78/245 (31%), Gaps = 47/245 (19%)
Query: 135 SSSLEILNLSSNYLS-GSIPVQISSLRNLQTLILDDNKFT----GAVPSELSLLQVLSVL 189
S ++ L++ LS + L+ Q + LDD T + S L + L+ L
Sbjct: 2 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAEL 61
Query: 190 SLKNNS--------LSGFLPVSLTGLQSLRVVSLSANHLSGE-----IPDLRNLKNLRVF 236
+L++N + L +Q L L L+G LR L L+
Sbjct: 62 NLRSNELGDVGVHCVLQGLQTPSCKIQKLS---LQNCCLTGAGCGVLSSTLRTLPTLQEL 118
Query: 237 DVQDNYFGPRFPRL--------HKKMVTLVLRNNRF------QFGLNPDELRSYNQLQKL 282
+ DN G +L ++ L L LR+ ++L
Sbjct: 119 HLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLA---SVLRAKPDFKEL 175
Query: 283 DISLNRF---VGPFIPSLLSLP--SITYLDIHGNKLT----GLLLQNMSCNPQLAFVDLS 333
+S N + L + L + +T L ++ L + L
Sbjct: 176 TVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALG 235
Query: 334 SNLLT 338
SN L
Sbjct: 236 SNKLG 240
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 2e-06
Identities = 54/279 (19%), Positives = 91/279 (32%), Gaps = 44/279 (15%)
Query: 104 FFSTLGSLSSLKVLSLV--SLGLWG--PLPGSIAHS-SSLEILNLSSNYLS----GSIPV 154
S L + K L++ + G L + S LE L L S ++ +
Sbjct: 162 LASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCG 221
Query: 155 QISSLRNLQTLILDDNKFTGA-----VPSELSLLQVLSVLSLKNNSLS----GFLPVSLT 205
++S +L+ L L NK P L L L + ++ G L L
Sbjct: 222 IVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLR 281
Query: 206 GLQSLRVVSLSANHLSGE-----IPDLRN-LKNLRVFDVQDNYFGPRF-------PRLHK 252
+SL+ +SL+ N L E L L V+ F ++
Sbjct: 282 AKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNR 341
Query: 253 KMVTLVLRNNRFQ-FGLNP--DELRSYN-QLQKLDISLNRF----VGPFIPSLLSLPSIT 304
++ L + NNR + G+ L L+ L ++ +LL+ S+
Sbjct: 342 FLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLR 401
Query: 305 YLDIHGNKLT-----GLLLQNMSCNPQLAFVDLSSNLLT 338
LD+ N L L+ L + L +
Sbjct: 402 ELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWS 440
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 4e-04
Identities = 38/209 (18%), Positives = 64/209 (30%), Gaps = 42/209 (20%)
Query: 95 LAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGS---------IAHSSSLEILNLSS 145
L N D + L L +L +W + + SL+ L+L+
Sbjct: 234 LGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAG 293
Query: 146 NYLSGS-----IPVQISSLRNLQTLILDDNKFTG----AVPSELSLLQVLSVLSLKNNS- 195
N L + L++L + FT S L+ + L L + NN
Sbjct: 294 NELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRL 353
Query: 196 -------LSGFLPVSLTGLQSLRVVSLSANHLSGE-----IPDLRNLKNLRVFDVQDNYF 243
L L + L+ L L+ +S L +LR D+ +N
Sbjct: 354 EDAGVRELCQGLGQPGSVLRVLW---LADCDVSDSSCSSLAATLLANHSLRELDLSNNCL 410
Query: 244 GPR--------FPRLHKKMVTLVLRNNRF 264
G + + LVL + +
Sbjct: 411 GDAGILQLVESVRQPGCLLEQLVLYDIYW 439
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 8e-11
Identities = 55/297 (18%), Positives = 100/297 (33%), Gaps = 85/297 (28%)
Query: 494 GQIYKGKLTDG----TLVAIRSLKMSKKSSPHMYTYHI----ELISKLRHSNLVSALGHC 545
G +Y G+ D AI K + + L+ L H N+++ +G
Sbjct: 35 GVVYHGEYIDQAQNRIQCAI---KSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIM 91
Query: 546 LDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIV 605
L + + +++ Y + L FI P T I+ + + +G+++L
Sbjct: 92 LP---PEG---LPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA---- 141
Query: 606 PGVFSNN-----LKITDVLLDENFHVKI-----------NSYNLPLLAEARGKGSAEVSS 649
L + +LDE+F VK+ Y + A +
Sbjct: 142 ----EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYY-----SVQQHRHARL-- 190
Query: 650 PAKKT---SVLAR--TEQDDKSDVYDIGIILIEIIV--GRP---ITSENVVVLVKD---L 696
P K T S+ T KSDV+ G++L E++ P I ++ + L
Sbjct: 191 PVKWTALESLQTYRFTT---KSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRL 247
Query: 697 LQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
Q C D L ++M +C +P RP+ + ++
Sbjct: 248 PQ-----------------PEYCPDS-LYQVM---QQCWEADPAVRPTFRVLVGEVE 283
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 8e-11
Identities = 55/295 (18%), Positives = 104/295 (35%), Gaps = 66/295 (22%)
Query: 494 GQIYKGKLT-----DGTLVAIRSLK-MSKKSSPHMYTYHIELISKLRHSNLVSALGHCLD 547
G++ + G VA++SLK S + IE++ L H N+V G C +
Sbjct: 35 GKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTE 94
Query: 548 FSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPG 607
+ I LI E+ P+ +L+ ++ K+ Q++ A+ I KG+ +L
Sbjct: 95 -DGGNG----IKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG------ 143
Query: 608 VFSNN-----LKITDVLLDENFHVKINSYNLPLLAEAR----GKGSAEVSSPAKK----- 653
S L +VL++ VKI + L + K V
Sbjct: 144 --SRQYVHRDLAARNVLVESEHQVKIGDFGL-----TKAIETDKEYYTVKDDRDSPVFWY 196
Query: 654 ----------TSVLARTEQDDKSDVYDIGIILIEII-VGRPITSENVVVLVKDLL-QVNI 701
SDV+ G+ L E++ +S + L +
Sbjct: 197 APECLMQSKFYI---------ASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQM 247
Query: 702 GTDEARKSIVDPAVM---NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
++ + + C DE + ++M +C +P +R S ++ + +
Sbjct: 248 TVTRLVNTLKEGKRLPCPPNCPDE-VYQLM---RKCWEFQPSNRTSFQNLIEGFE 298
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 8e-11
Identities = 52/288 (18%), Positives = 103/288 (35%), Gaps = 52/288 (18%)
Query: 494 GQIYKGKLT-----DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDF 548
G + + G +VA++ L+ S + + IE++ L+H N+V G C
Sbjct: 24 GSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYS- 82
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
+ + LI EY P +LR ++ ++ ++ + I KG+++L
Sbjct: 83 AGRRN----LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG------- 131
Query: 609 FSNN-----LKITDVLLDENFHVKINSYNLPLLAEAR----GKGSAEVSSPAKK------ 653
+ L ++L++ VKI + L + K +V P +
Sbjct: 132 -TKRYIHRDLATRNILVENENRVKIGDFGL-----TKVLPQDKEFFKVKEPGESPIFWYA 185
Query: 654 -TSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQV---NIGTDEARKS 709
S+ SDV+ G++L E+ + ++ + + +
Sbjct: 186 PESLTESK-FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 244
Query: 710 IVD----PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
+ + P C DE + +M C +N RPS D +
Sbjct: 245 LKNNGRLPRPDG-CPDE-IYMIM---TECWNNNVNQRPSFRDLALRVD 287
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 63.0 bits (153), Expect = 1e-10
Identities = 38/253 (15%), Positives = 76/253 (30%), Gaps = 44/253 (17%)
Query: 514 MSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSF 573
+S S + I + N V +Y+ + E L+ +
Sbjct: 99 LSSPSPMDAPSVKIRRMDPFSTKNTV-------GQLQPSSPKVYLYIQMQLCRKENLKDW 151
Query: 574 ISGPGYKLTWVQRIAAAIA--IVKGVQFLHT-GIV-----PG-VF---SNNLKITD---- 617
++ + I I + V+FLH+ G++ P +F + +K+ D
Sbjct: 152 MNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLV 211
Query: 618 -VLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILI 676
+ + + + G+ SP + K D++ +G+IL
Sbjct: 212 TAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSP----EQIHGNNYSHKVDIFSLGLILF 267
Query: 677 EIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLS 736
E++ E V ++ R + E + LS
Sbjct: 268 ELLYSFSTQMERVRIITD-----------VRNLKFPLLFTQKYPQEH-----MMVQDMLS 311
Query: 737 NEPKDRPSVEDTL 749
P +RP D +
Sbjct: 312 PSPTERPEATDII 324
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 63.6 bits (155), Expect = 1e-10
Identities = 63/279 (22%), Positives = 103/279 (36%), Gaps = 59/279 (21%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553
G+++ G T VAI++LK SP + +++ KLRH LV ++P
Sbjct: 198 GEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVV----SEEP 252
Query: 554 SISIIYLIFEYAPNETLRSFI-SGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNN 612
IY++ EY +L F+ G L Q + A I G+ ++ N
Sbjct: 253 ----IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE--------RMN 300
Query: 613 -----LKITDVLLDENFHVKINSYNLPLLAEARG------KGSAEVSSPAKKTS--VLAR 659
L+ ++L+ EN K+ + L AR P K T+
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGL-----ARLIEDNEYTARQGAKFPIKWTAPEAALY 355
Query: 660 TEQDDKSDVYDIGIILIEIIV--GRP---ITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714
KSDV+ GI+L E+ P + + V+ V + P
Sbjct: 356 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-------------ERGYRMPC 402
Query: 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
C + L +M +C EP++RP+ E L+
Sbjct: 403 PPE-CPES-LHDLM---CQCWRKEPEERPTFEYLQAFLE 436
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 63.3 bits (154), Expect = 1e-10
Identities = 59/280 (21%), Positives = 101/280 (36%), Gaps = 59/280 (21%)
Query: 494 GQIYKGKLTD-GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD 552
G++Y+G VA+++LK + ++ +++H NLV LG C +
Sbjct: 234 GEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTR---EP 289
Query: 553 PSISIIYLIFEYAPNETLRSFI-SGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSN 611
P Y+I E+ L ++ +++ V + A I +++L
Sbjct: 290 P----FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--------KK 337
Query: 612 N-----LKITDVLLDENFHVKINSYNLPLLAEARG------KGSAEVSSPAKKTS--VLA 658
N L + L+ EN VK+ + L +R A P K T+ LA
Sbjct: 338 NFIHRNLAARNCLVGENHLVKVADFGL-----SRLMTGDTYTAHAGAKFPIKWTAPESLA 392
Query: 659 RTEQDDKSDVYDIGIILIEIIV--GRP---ITSENVVVLVKDLLQVNIGTDEARKSIVDP 713
+ KSDV+ G++L EI P I V L++ K
Sbjct: 393 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-------------KDYRME 439
Query: 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
C ++ + +M C P DRPS + +
Sbjct: 440 RPEG-CPEK-VYELM---RACWQWNPSDRPSFAEIHQAFE 474
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 2e-10
Identities = 55/283 (19%), Positives = 109/283 (38%), Gaps = 59/283 (20%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYH--IELISKLRHSNLVSALGHCLDF 548
S+G+ K + +DG ++ + L + + L+ +L+H N+V D
Sbjct: 18 SYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVR----YYD- 72
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWV--QRIAAAIA-IVKGVQFLHTGIV 605
+ D + + +Y++ EY L S I+ + ++ + + + + ++ H
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 606 PG--VFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLART--- 660
G V +LK +V LD +VK+ + L + + A+T
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGL--------------ARILNHDTSFAKTFVG 178
Query: 661 -------EQ------DDKSDVYDIGIILIEIIVGR-PITSENVVVLVKDLLQVNIGTDEA 706
EQ ++KSD++ +G +L E+ P T+ + L + +
Sbjct: 179 TPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKF----- 233
Query: 707 RKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTL 749
+ SDE + E+ R L+ + RPSVE+ L
Sbjct: 234 ------RRIPYRYSDE----LNEIITRMLNLKDYHRPSVEEIL 266
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 63.0 bits (153), Expect = 2e-10
Identities = 63/279 (22%), Positives = 103/279 (36%), Gaps = 59/279 (21%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553
G+++ G T VAI++LK SP + +++ KLRH LV ++P
Sbjct: 281 GEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVV----SEEP 335
Query: 554 SISIIYLIFEYAPNETLRSFI-SGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNN 612
IY++ EY +L F+ G L Q + A I G+ ++ N
Sbjct: 336 ----IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE--------RMN 383
Query: 613 -----LKITDVLLDENFHVKINSYNLPLLAEARG------KGSAEVSSPAKKTS--VLAR 659
L+ ++L+ EN K+ + L AR P K T+
Sbjct: 384 YVHRDLRAANILVGENLVCKVADFGL-----ARLIEDNEYTARQGAKFPIKWTAPEAALY 438
Query: 660 TEQDDKSDVYDIGIILIEIIV--GRP---ITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714
KSDV+ GI+L E+ P + + V+ V + P
Sbjct: 439 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-------------ERGYRMPC 485
Query: 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
C + L +M +C EP++RP+ E L+
Sbjct: 486 PPE-CPES-LHDLM---CQCWRKEPEERPTFEYLQAFLE 519
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 2e-10
Identities = 50/281 (17%), Positives = 104/281 (37%), Gaps = 56/281 (19%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYH--IELISKLRHSNL-VSALGHCLDFSL 550
++++ + AI+ + + + + + +Y I ++KL+ + + L D+ +
Sbjct: 42 SKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL---YDYEI 98
Query: 551 DDPSISIIYLIFEYAPNETLRSFISGPG-YKLTWVQRIAAAIAIVKGVQFLHT-GIV--- 605
D IY++ E + L S++ + + ++ V +H GIV
Sbjct: 99 TD---QYIYMVMECGNID-LNSWLKKKKSIDPWERKSYWKNM--LEAVHTIHQHGIVHSD 152
Query: 606 --PG---VFSNNLKITD-----VLLDENFHVKINSYNLPLLAEARGKGSA-----EV--S 648
P + LK+ D + + V +S G+ E
Sbjct: 153 LKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQ----------VGTVNYMPPEAIKD 202
Query: 649 SPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARK 708
+ + + ++++ KSDV+ +G IL + G+ Q I
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT------------PFQQIINQISKLH 250
Query: 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTL 749
+I+DP E D K + ++ CL +PK R S+ + L
Sbjct: 251 AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 62.0 bits (150), Expect = 2e-10
Identities = 29/295 (9%), Positives = 79/295 (26%), Gaps = 54/295 (18%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTY---HIELISKLRHSNLVSALGHC-- 545
++ + + A++ M ++S ++L + A
Sbjct: 74 DRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRL 133
Query: 546 -----------------LDFSLDDPSISIIYLIFEYAPNE-----TLRSFISGPGYKLTW 583
L DD +++ L+ A + + F+
Sbjct: 134 LLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGI 193
Query: 584 VQRIAAAIAIVKGVQFLHT-GIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGK 642
+ +++ L + G+V G + ++ + + + + + RG
Sbjct: 194 LALHILTAQLIRLAANLQSKGLVHG----HFTPDNLFIMPDGRLMLGDVSALWKVGTRGP 249
Query: 643 ---GSAEVSSPAKKTSVLARTEQ--DDKSDVYDIGIILIEIIVGRP---ITSENVVVLVK 694
+ L + + + +G+ + + + + + K
Sbjct: 250 ASSVPVTYAPR----EFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWK 305
Query: 695 DLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTL 749
GTD P + +K L R L+ + + R + +
Sbjct: 306 RPSLRVPGTDSLAFGSCTPL------PDFVKT---LIGRFLNFDRRRRLLPLEAM 351
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 63.3 bits (153), Expect = 2e-10
Identities = 61/480 (12%), Positives = 118/480 (24%), Gaps = 151/480 (31%)
Query: 326 QLAFVDLSSNLLTGYLPS--CLQVEAKTRLVLYSKNCLSNEEQEQHPSNFCQNEALAVKV 383
Q + D+ S ++ + C V+ + +L + + L +
Sbjct: 15 QYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEI---DHIIMSKDAVSGTLRLFWTL 71
Query: 384 LPHKQKNKSSYASSVVGGTVGGIAVVGAVLLVVKKVYNKNNNKVETTSTRFILENVSTIN 443
L K + V V++ Y F++ + T
Sbjct: 72 L---SKQEEMVQKFVEE--------------VLRINYK------------FLMSPIKTEQ 102
Query: 444 TVKLLSDARYISETMKM---GASLPAY---RTFTLDELKEATDCFDSSSFMCDASHGQIY 497
+ YI + ++ Y R +L++A + + G +
Sbjct: 103 RQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNV--LIDGVLG 160
Query: 498 KGKLTDGTLVA--IRS-------------LKMSKKSSPHMYTYHIELISKLRHSNLVSAL 542
GK + S L + +SP ++ L L+ +
Sbjct: 161 SGK---TWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPE------TVLEML--QKLLYQI 209
Query: 543 GHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLT-------WVQRIAAAIAIVK 595
S D S +I I LR + Y+ + A +
Sbjct: 210 DPNWT-SRSDHSSNIKLRIHSI--QAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNL-- 264
Query: 596 GVQFLHTGIVPGVFSNNLKITDVLL-DENFHVKIN--------SYNLPLLAEARGKGSAE 646
+ L T + ++TD L H+ ++ LL + +
Sbjct: 265 SCKILLT-------TRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQD 317
Query: 647 VSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEA 706
+ T+ + II E I T +N VN
Sbjct: 318 LPREVLTTNPRR------------LSII-AESIRDGLATWDN-------WKHVNC----- 352
Query: 707 RKSIVDPAVMNECSDESLKRMMELCLRCLSNE------------PKDRP---SVEDTLWN 751
+ L ++E L L P + +W
Sbjct: 353 ---------------DKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWF 397
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 54.5 bits (130), Expect = 1e-07
Identities = 95/631 (15%), Positives = 188/631 (29%), Gaps = 184/631 (29%)
Query: 4 PVDKLHLLVFIILSIIVSAPHSNQLQLFQYQTLVRIQQLL--NYPSVSSSFNTTTVTDFC 61
V L + +LS +Q F ++++L NY + S T
Sbjct: 60 AVSGTLRLFWTLLS-----KQEEMVQKF-------VEEVLRINYKFLMSPIKTEQRQ--- 104
Query: 62 NIEPTPSLTLVCYEDNLTQLHIAGDNNNNINGGLA-HNFSTDTFFSTL-GSLSSLKVLSL 119
PS+ Y + +L+ N+N + A +N S + L +L L+
Sbjct: 105 -----PSMMTRMYIEQRDRLY----NDNQV---FAKYNVSRLQPYLKLRQALLELRPAKN 152
Query: 120 VSL-GLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQI------------SSLRNLQTLI 166
V + G+ G + + + + S + + +I + L LQ L+
Sbjct: 153 VLIDGVLG------SGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLL 206
Query: 167 LDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQ---SLRVVSLSANHLSGE 223
P+ S S + L+ +S+ L L L V+
Sbjct: 207 YQ------IDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLL--------- 251
Query: 224 IPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVL-RNNRFQFGLNPDELRSYNQLQKL 282
+++N K F+ + L+ R + L+
Sbjct: 252 --NVQNAKAWNAFN-----LSCK---------ILLTTRFKQVTDFLSAATTT-------- 287
Query: 283 DISLNRFVGPFIP----SLLSLPSITYLDIHGNKLTGLLLQNMSCNPQL-----AFVDLS 333
ISL+ P SLL YLD + L + ++ NP+ +
Sbjct: 288 HISLDHHSMTLTPDEVKSLLLK----YLDC---RPQDLPREVLTTNPRRLSIIAESIRDG 340
Query: 334 SNLLTGYLPSCLQVEAKTRLVLYSKNCLSNEEQEQHPSNFCQNEALAV---------KVL 384
+ + + T ++ S N L E + F + L+V +L
Sbjct: 341 LATWDNWKH--VNCDKLTTIIESSLNVLEPAEYRKM---F---DRLSVFPPSAHIPTILL 392
Query: 385 PHKQKNKSSYASSVVGGTVGGIAVVGAVLLVVKKVYNKNNNKVETTSTRFILENVSTINT 444
+ VV L + K E+ +I +
Sbjct: 393 SLIWFDVIKSDVMVV-----------VNKLHKYSLVEKQPK-----------ESTISIPS 430
Query: 445 VKLLSDARYISETMKMGASLPAYRTFTLDELKEATDCFDSSSFMCDASHGQIYKGKLTDG 504
+ Y+ +K+ +R+ +D FDS + Y
Sbjct: 431 I-------YLELKVKLENEYALHRSI-VDHYN-IPKTFDSDDLIPPYLDQYFY------- 474
Query: 505 TLVA--IRSLKMSKKSS--PHMYT-YH-IELISKLRHSNL-VSALGHCLDFSLDDPSISI 557
+ + +++++ ++ + ++ + +E K+RH + +A G L+
Sbjct: 475 SHIGHHLKNIEHPERMTLFRMVFLDFRFLE--QKIRHDSTAWNASGSILNTLQQ----LK 528
Query: 558 IYL--IFEYAPN-----ETLRSFISGPGYKL 581
Y I + P + F+ L
Sbjct: 529 FYKPYICDNDPKYERLVNAILDFLPKIEENL 559
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.5 bits (104), Expect = 1e-04
Identities = 49/333 (14%), Positives = 98/333 (29%), Gaps = 121/333 (36%)
Query: 5 VDKLHLLVFIILSIIVSA--PHSNQLQLFQYQTLVRIQQLLNYPSVSSSFNTTTVTDFCN 62
V + LSII + +++ ++ ++ SS N
Sbjct: 322 VLTTNPRR---LSIIAESIRDGLATWDNWKHVNCDKLTTII-----ESSLN--------V 365
Query: 63 IEPTPSLTLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSL 122
+EP + ++ L + F T +LSL
Sbjct: 366 LEP--AEYRKMFDR----LSV---------------FPPSAHIPT-------ILLSL--- 394
Query: 123 GLWGPL----PGSIA---HSSSLEILNLSSNYLSGSIP-------VQISSLRNLQTLILD 168
+W + + H SL + + SIP V++ + L I+D
Sbjct: 395 -IWFDVIKSDVMVVVNKLHKYSL--VEKQPKESTISIPSIYLELKVKLENEYALHRSIVD 451
Query: 169 ------------------DNKF--------TGAVPSELSLLQVLSVLSLKNNSLSGFLPV 202
D F E L + L + FL
Sbjct: 452 HYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFR------FLE- 504
Query: 203 SLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLR-- 260
Q +R S + N + L+ LK + + + DN P++ RL ++ + +
Sbjct: 505 -----QKIRHDSTAWNASGSILNTLQQLKFYKPY-ICDND--PKYERLVNAILDFLPKIE 556
Query: 261 ----NNRF----QFGLNPDE----LRSYNQLQK 281
+++ + L ++ ++ Q+Q+
Sbjct: 557 ENLICSKYTDLLRIALMAEDEAIFEEAHKQVQR 589
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 3e-10
Identities = 42/282 (14%), Positives = 97/282 (34%), Gaps = 66/282 (23%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYH--IELISKLRHSNLVSALGHCLDF 548
S G+ K DG I+ + +S+ SS + +++ ++H N+V +
Sbjct: 36 SFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIV----QYRES 91
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKL---TWVQRIAAAIAIVKGVQFLHTGIV 605
++ +Y++ +Y L I+ L + + I ++ +H
Sbjct: 92 FEEN---GSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDW--FVQICLALKHVH---- 142
Query: 606 PGVFSNN-----LKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTS----- 655
+K ++ L ++ V++ + + + ++S +
Sbjct: 143 ----DRKILHRDIKSQNIFLTKDGTVQLGDFGI----------ARVLNSTVELARACIGT 188
Query: 656 -------VLARTEQDDKSDVYDIGIILIEIIVGR-PITSENVVVLVKDLLQVNIGTDEAR 707
+ ++KSD++ +G +L E+ + + ++ LV I
Sbjct: 189 PYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVL-----KI-----I 238
Query: 708 KSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTL 749
P ++ L+ L + P+DRPSV L
Sbjct: 239 SGSFPP--VSLHYSYDLR---SLVSQLFKRNPRDRPSVNSIL 275
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 3e-10
Identities = 47/289 (16%), Positives = 97/289 (33%), Gaps = 74/289 (25%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSP---HMYTYHIELISKLRHSNLVSALGHCLD 547
++Y+ L DG VA++ +++ I+L+ +L H N++
Sbjct: 44 QFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIK----YYA 99
Query: 548 FSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWV--QRIAAAIA-IVKGVQFLHTGI 604
++D ++I + E A L I + + + + + ++ +H
Sbjct: 100 SFIEDNELNI---VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH--- 153
Query: 605 VPGVFSNN-----LKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLAR 659
S +K +V + VK+ L SS + A
Sbjct: 154 -----SRRVMHRDIKPANVFITATGVVKLGDLGL----------GRFFSS----KTTAAH 194
Query: 660 T----------EQ------DDKSDVYDIGIILIEIIVGRP---ITSENVVVLVKDLLQVN 700
+ E+ + KSD++ +G +L E+ + N+ L K
Sbjct: 195 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCK-----K 249
Query: 701 IGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTL 749
I + P + S+E + +L C++ +P+ RP V
Sbjct: 250 I-----EQCDYPPLPSDHYSEE----LRQLVNMCINPDPEKRPDVTYVY 289
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 3e-10
Identities = 41/184 (22%), Positives = 67/184 (36%), Gaps = 34/184 (18%)
Query: 131 SIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLS 190
S S ++ N ++ + S+ + NL+ L L N+ + S L L L LS
Sbjct: 36 SQKELSGVQNFNGDNSNIQ-SLAG-MQFFTNLKELHLSHNQIS--DLSPLKDLTKLEELS 91
Query: 191 LKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRL 250
+ N L + L L L N L + L +LKNL
Sbjct: 92 VNRNRLKNLNGIPSACLSRL---FLDNNELR-DTDSLIHLKNLE---------------- 131
Query: 251 HKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHG 310
L +RNN+ + + L ++L+ LD+ N L L + ++D+ G
Sbjct: 132 -----ILSIRNNKLK---SIVMLGFLSKLEVLDLHGNEITN--TGGLTRLKKVNWIDLTG 181
Query: 311 NKLT 314
K
Sbjct: 182 QKCV 185
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 3e-09
Identities = 39/180 (21%), Positives = 71/180 (39%), Gaps = 30/180 (16%)
Query: 62 NIEPTPSLTLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVS 121
+ P P L N + ++ ++ T + LS ++ + +
Sbjct: 11 QVFPDPGLA------NAVKQNL---GKQSV-----------TDLVSQKELSGVQNFNGDN 50
Query: 122 LGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELS 181
+ L G + ++L+ L+LS N +S + + L L+ L ++ N+ + +
Sbjct: 51 SNI-QSLAG-MQFFTNLKELHLSHNQIS-DLS-PLKDLTKLEELSVNRNRLK--NLNGIP 104
Query: 182 LLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDN 241
LS L L NN L L L++L ++S+ N L I L L L V D+ N
Sbjct: 105 SAC-LSRLFLDNNELRDTDS--LIHLKNLEILSIRNNKLK-SIVMLGFLSKLEVLDLHGN 160
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 9e-09
Identities = 36/183 (19%), Positives = 62/183 (33%), Gaps = 34/183 (18%)
Query: 156 ISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSL 215
L N L T V L + + N+++ + +L+ + L
Sbjct: 15 DPGLANAVKQNLGKQSVTDLVS--QKELSGVQNFNGDNSNIQSLAG--MQFFTNLKELHL 70
Query: 216 SANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRS 275
S N +S ++ L++L L L + NR + LN
Sbjct: 71 SHNQIS-DLSPLKDLTKLE---------------------ELSVNRNRLK-NLNGIPSAC 107
Query: 276 YNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSN 335
L +L + N SL+ L ++ L I NKL + + +L +DL N
Sbjct: 108 ---LSRLFLDNNELRD--TDSLIHLKNLEILSIRNNKLKS--IVMLGFLSKLEVLDLHGN 160
Query: 336 LLT 338
+T
Sbjct: 161 EIT 163
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 3e-10
Identities = 50/281 (17%), Positives = 104/281 (37%), Gaps = 56/281 (19%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYH--IELISKLRHSNL-VSALGHCLDFSL 550
++++ + AI+ + + + + + +Y I ++KL+ + + L D+ +
Sbjct: 23 SKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL---YDYEI 79
Query: 551 DDPSISIIYLIFEYAPNETLRSFISGPG-YKLTWVQRIAAAIAIVKGVQFLHT-GIV--- 605
D IY++ E + L S++ + + ++ V +H GIV
Sbjct: 80 TD---QYIYMVMECGNID-LNSWLKKKKSIDPWERKSYWKNM--LEAVHTIHQHGIVHSD 133
Query: 606 --PG---VFSNNLKITD-----VLLDENFHVKINSYNLPLLAEARGKGSA-----EV--S 648
P + LK+ D + + V +S G+ E
Sbjct: 134 LKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQ----------VGTVNYMPPEAIKD 183
Query: 649 SPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARK 708
+ + + ++++ KSDV+ +G IL + G+ Q I
Sbjct: 184 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT------------PFQQIINQISKLH 231
Query: 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTL 749
+I+DP E D K + ++ CL +PK R S+ + L
Sbjct: 232 AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 272
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 60.3 bits (147), Expect = 4e-10
Identities = 52/281 (18%), Positives = 98/281 (34%), Gaps = 63/281 (22%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553
G ++ G + VAI++++ S + E++ KL H LV G CL+ P
Sbjct: 22 GLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE---QAP 77
Query: 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNN- 612
I L+ E+ + L ++ + + + +G+ +L
Sbjct: 78 ----ICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE--------EACV 125
Query: 613 ----LKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSS------PAKKTS--VLART 660
L + L+ EN +K++ + + R + +S P K S V + +
Sbjct: 126 IHRDLAARNCLVGENQVIKVSDFGM-----TRFVLDDQYTSSTGTKFPVKWASPEVFSFS 180
Query: 661 EQDDKSDVYDIGIILIEIIV--GRP---ITSENVVVLVKD---LLQVNIGTDEARKSIVD 712
KSDV+ G+++ E+ P ++ VV + L
Sbjct: 181 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRL---------------- 224
Query: 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
S + ++M C P+DRP+ L L
Sbjct: 225 YKPRL-ASTH-VYQIM---NHCWRERPEDRPAFSRLLRQLA 260
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 59.9 bits (146), Expect = 5e-10
Identities = 69/282 (24%), Positives = 114/282 (40%), Gaps = 65/282 (23%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553
G+++ G T VA++SLK SP + L+ +L+H LV +P
Sbjct: 27 GEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVV----TQEP 81
Query: 554 SISIIYLIFEYAPNETLRSFI-SGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNN 612
IY+I EY N +L F+ + G KLT + + A I +G+ F+ N
Sbjct: 82 ----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--------ERN 129
Query: 613 -----LKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSS------PAKKTS--VLAR 659
L+ ++L+ + KI + L AR E ++ P K T+ +
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGL-----ARLIEDNEYTAREGAKFPIKWTAPEAINY 184
Query: 660 TEQDDKSDVYDIGIILIEII-VGR-P---ITSENVVVLVKD---LLQVNIGTDEARKSIV 711
KSDV+ GI+L EI+ GR P +T+ V+ ++ +
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM--------------- 229
Query: 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
N C +E L ++M C P+DRP+ + L+
Sbjct: 230 -VRPDN-CPEE-LYQLM---RLCWKERPEDRPTFDYLRSVLE 265
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 61.0 bits (148), Expect = 5e-10
Identities = 42/187 (22%), Positives = 69/187 (36%), Gaps = 35/187 (18%)
Query: 135 SSSLEILNLSSNYLSGSIPVQI--SSLRNLQTLILDDNKFTGAVPSE-LSLLQVLSVLSL 191
S +L+LS N LS + + + L NL +L+L N + SE + L L L
Sbjct: 38 PSYTALLDLSHNNLS-RLRAEWTPTRLTNLHSLLLSHNHLN-FISSEAFVPVPNLRYLDL 95
Query: 192 KNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD--LRNLKNLRVFDVQDNYFGPRFPR 249
+N L + LQ+L V+ L NH+ + ++ L+
Sbjct: 96 SSNHLHTLDEFLFSDLQALEVLLLYNNHIV-VVDRNAFEDMAQLQ--------------- 139
Query: 250 LHKKMVTLVLRNNRFQFGLNPD---ELRSYNQLQKLDISLNRFVGPFIPSLLSLPSIT-- 304
L L N+ + + +L LD+S N+ + L LP+
Sbjct: 140 ------KLYLSQNQISR-FPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKN 192
Query: 305 YLDIHGN 311
L +H N
Sbjct: 193 GLYLHNN 199
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 61.8 bits (150), Expect = 6e-10
Identities = 43/245 (17%), Positives = 84/245 (34%), Gaps = 68/245 (27%)
Query: 532 KLRHSNLVSALGHCLDF--SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAA 589
++ H ++V +F D + Y++ EY ++L+ L + IA
Sbjct: 135 EVVHPSIVQIF----NFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQK---LPVAEAIAY 187
Query: 590 AIAIVKGVQFLHT-GIV-----PG---VFSNNLKITDVLLDENFHV--KINSYNLPLLAE 638
+ I+ + +LH+ G+V P + LK+ D +INS+
Sbjct: 188 LLEILPALSYLHSIGLVYNDLKPENIMLTEEQLKLID------LGAVSRINSFGYLY--- 238
Query: 639 ARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGR-PITSENVVVLVKDLL 697
G+ +P + RT +D+Y +G L + + V L +D
Sbjct: 239 ----GTPGFQAPE-----IVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDGLPEDDP 289
Query: 698 QVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRP-SVEDTLWNLQFAT 756
+ +S R L R + +P+ R + E+ +
Sbjct: 290 VLKT-------------------YDSYGR---LLRRAIDPDPRQRFTTAEE------MSA 321
Query: 757 QIQGL 761
Q+ G+
Sbjct: 322 QLTGV 326
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 6e-10
Identities = 62/287 (21%), Positives = 107/287 (37%), Gaps = 75/287 (26%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553
G+++ T VA++++K S + ++ L+H LV +P
Sbjct: 202 GEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVV----TKEP 256
Query: 554 SISIIYLIFEYAPNETLRSFI-SGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNN 612
IY+I E+ +L F+ S G K + I + I +G+ F+ N
Sbjct: 257 ----IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE--------QRN 304
Query: 613 -----LKITDVLLDENFHVKI-----------NSYNLPLLAEARGKGSAEVSSPAKKTS- 655
L+ ++L+ + KI N Y A K P K T+
Sbjct: 305 YIHRDLRAANILVSASLVCKIADFGLARVIEDNEY----TAREGAKF------PIKWTAP 354
Query: 656 -VLARTEQDDKSDVYDIGIILIEII-VGRP----ITSENVVVLVKD---LLQVNIGTDEA 706
+ KSDV+ GI+L+EI+ GR +++ V+ ++ +
Sbjct: 355 EAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRM---------- 404
Query: 707 RKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
P N C +E L +M +RC N P++RP+ E L
Sbjct: 405 ------PRPEN-CPEE-LYNIM---MRCWKNRPEERPTFEYIQSVLD 440
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 59.5 bits (145), Expect = 8e-10
Identities = 57/278 (20%), Positives = 104/278 (37%), Gaps = 61/278 (21%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553
G + G G VA++ +K ++ + ++++LRHSNLV LG +
Sbjct: 35 GDVMLGDYR-GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVI---VEEKG 88
Query: 554 SISIIYLIFEYAPNETLRSFI-SGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNN 612
+ Y++ EY +L ++ S L + ++ + + +++L NN
Sbjct: 89 GL---YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE--------GNN 137
Query: 613 -----LKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSS--PAKKTS--VLARTEQD 663
L +VL+ E+ K++ + L + S + + P K T+ L +
Sbjct: 138 FVHRDLAARNVLVSEDNVAKVSDFGL-----TKEASSTQDTGKLPVKWTAPEALREKKFS 192
Query: 664 DKSDVYDIGIILIEIIV--GRP---ITSENVVVLVKD---LLQVNIGTDEARKSIVDPAV 715
KSDV+ GI+L EI P I ++VV V+ + A
Sbjct: 193 TKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM----------------DAP 236
Query: 716 MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
C + +M C + RPS L+
Sbjct: 237 DG-CPPA-VYEVM---KNCWHLDAAMRPSFLQLREQLE 269
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 1e-09
Identities = 28/136 (20%), Positives = 52/136 (38%), Gaps = 10/136 (7%)
Query: 108 LGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLIL 167
+ + L L + + A + ++ S N + + LR L+TL++
Sbjct: 15 YTNAVRDRELDLRGYKI-PVIENLGATLDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLV 71
Query: 168 DDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVS-LTGLQSLRVVSLSANHLSGEIPD 226
++N+ L L+ L L NNSL + L L+SL + + N ++
Sbjct: 72 NNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT-NKKH 130
Query: 227 LR-----NLKNLRVFD 237
R + +RV D
Sbjct: 131 YRLYVIYKVPQVRVLD 146
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 2e-05
Identities = 30/174 (17%), Positives = 49/174 (28%), Gaps = 48/174 (27%)
Query: 136 SSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNS 195
L+L + I ++L + DN+ LL+ L L + NN
Sbjct: 19 VRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR--KLDGFPLLRRLKTLLVNNNR 75
Query: 196 LSGFLPVSLTGLQSLRVVSLSANHLS--GEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKK 253
+ L L + L+ N L G++ L +LK+L
Sbjct: 76 ICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLT------------------- 116
Query: 254 MVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLD 307
L + N N R Y + +P + LD
Sbjct: 117 --YLCILRNPVT---NKKHYRLY-------------------VIYKVPQVRVLD 146
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 1e-04
Identities = 24/131 (18%), Positives = 46/131 (35%), Gaps = 15/131 (11%)
Query: 212 VVSLSANHLSGEIPDLRNLKNLRVFDVQDNY------FGPRFPRLHKKMVTLVLRNNRFQ 265
+V L+A + + N R D++ G + + +N +
Sbjct: 1 MVKLTAELIE-QAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFD----AIDFSDNEIR 55
Query: 266 FGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLL-LQNMSCN 324
LR +L+ L ++ NR +LP +T L + N L L L ++
Sbjct: 56 KLDGFPLLR---RLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASL 112
Query: 325 PQLAFVDLSSN 335
L ++ + N
Sbjct: 113 KSLTYLCILRN 123
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 1e-04
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 7/116 (6%)
Query: 203 SLTGLQSLRVVSLSANHLSGEIPDL-RNLKNLRVFDVQDNYFGP--RFPRLHKKMVTLVL 259
T R + L + I +L L D DN FP L +++ TL++
Sbjct: 14 QYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKLDGFPLL-RRLKTLLV 71
Query: 260 RNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPF-IPSLLSLPSITYLDIHGNKLT 314
NNR + ++ L +L ++ N V + L SL S+TYL I N +T
Sbjct: 72 NNNRIC-RIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT 126
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 59.3 bits (144), Expect = 1e-09
Identities = 55/300 (18%), Positives = 103/300 (34%), Gaps = 82/300 (27%)
Query: 494 GQIYKGKLTDG----TLVAIRSLKMSKKSSPHMYTYHIE--LISKLRHSNLVSALGHCLD 547
G + + +L VA++ LK +S + + E + + H ++ +G L
Sbjct: 37 GSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLR 96
Query: 548 FSLDDPSISIIYLIFEYAPNETLRSFI-----SGPGYKLTWVQRIAAAIAIVKGVQFLHT 602
S + I +I + + L +F+ + L + + I G+++L
Sbjct: 97 -SRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS- 154
Query: 603 GIVPGVFSNN-----LKITDVLLDENFHVKI-----------NSYNLPLLAEARGKGSAE 646
S N L + +L E+ V + Y R +++
Sbjct: 155 -------SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDY-------YRQGCASK 200
Query: 647 VSSPAKKT---SVLAR--TEQDDKSDVYDIGIILIEII-VGRP----ITSENVVVLVKD- 695
+ P K S+ T SDV+ G+ + EI+ G+ I + + +
Sbjct: 201 L--PVKWLALESLADNLYTV---HSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGG 255
Query: 696 --LLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
L Q P EC +E + +M +C S +PK RPS L+
Sbjct: 256 NRLKQ--------------PP---ECMEE-VYDLM---YQCWSADPKQRPSFTCLRMELE 294
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 59.0 bits (143), Expect = 1e-09
Identities = 50/204 (24%), Positives = 78/204 (38%), Gaps = 33/204 (16%)
Query: 136 SSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNS 195
IL+LS N L + L L LD + T + + +L L L L +N
Sbjct: 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQVDGTLPV-LGTLDLSHNQ 88
Query: 196 LSGFLPVSLTGLQSLRVVSLSANHLSGEIPD--LRNLKNLRVFDVQDNYFGPRFPRLHKK 253
L LP+ L +L V+ +S N L+ +P LR L L+
Sbjct: 89 LQS-LPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQ------------------- 127
Query: 254 MVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPS--LLSLPSITYLDIHGN 311
L L+ N + L P L +L+KL ++ N +P+ L L ++ L + N
Sbjct: 128 --ELYLKGNELKT-LPPGLLTPTPKLEKLSLANNNLTE--LPAGLLNGLENLDTLLLQEN 182
Query: 312 KLTGLLLQNMSCNPQLAFVDLSSN 335
L + + + L F L N
Sbjct: 183 SLYT-IPKGFFGSHLLPFAFLHGN 205
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 1e-09
Identities = 50/237 (21%), Positives = 89/237 (37%), Gaps = 61/237 (25%)
Query: 531 SKLRHSNLVSALGHCLDFSLDD-PSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAA 589
+ L H +V+ D + P+ + Y++ EY TLR + G +T + I
Sbjct: 67 AALNHPAIVAVY----DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEV 121
Query: 590 AIAIVKGVQFLHT-GIV-----PGVFSNNLKITDVLLDENFHVKI---------NSYNLP 634
+ + F H GI+ P N +++ VK+
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPA----N-----IMISATNAVKVMDFGIARAIADSGNS 172
Query: 635 LLAEARGKGSAEVSSPAKKTSVLARTEQ------DDKSDVYDIGIILIEIIVGR-PITSE 687
+ A G+A+ SP EQ D +SDVY +G +L E++ G P T +
Sbjct: 173 VTQTAAVIGTAQYLSP----------EQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 222
Query: 688 N-VVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRP 743
+ V V + + R+ + P+ +E L + L+ L+ P++R
Sbjct: 223 SPVSVAYQHV----------REDPIPPSARHEGLSADLD---AVVLKALAKNPENRY 266
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 2e-09
Identities = 60/293 (20%), Positives = 110/293 (37%), Gaps = 49/293 (16%)
Query: 494 GQIYKGKLTD-----GTLVAIRSLK-MSKKSSPHMYTYHIELISKLRHSNLVSALGHCLD 547
G++ G +VA+++LK + + I+++ L H +++ G C D
Sbjct: 45 GKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCED 104
Query: 548 FSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPG 607
+ + L+ EY P +LR ++ P + + Q + A I +G+ +LH
Sbjct: 105 -AGAAS----LQLVMEYVPLGSLRDYL--PRHSIGLAQLLLFAQQICEGMAYLH------ 151
Query: 608 VFSNNLKITD-----VLLDENFHVKIN----SYNLPLLAE---ARGKGSAEVSSPAKKTS 655
+ + D VLLD + VKI + +P E R G SP +
Sbjct: 152 --AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDG----DSPVFWYA 205
Query: 656 VLARTEQ--DDKSDVYDIGIILIEII-VGRPITSENVVVLVKDLL-QVNIGTDEARKSIV 711
E SDV+ G+ L E++ S L + Q + + +
Sbjct: 206 PECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 265
Query: 712 DPAVM---NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ-FATQIQG 760
+ ++C E + +M C E RP+ E+ + L+ + QG
Sbjct: 266 RGERLPRPDKCPAE-VYHLM---KNCWETEASFRPTFENLIPILKTVHEKYQG 314
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 58.4 bits (142), Expect = 2e-09
Identities = 50/291 (17%), Positives = 97/291 (33%), Gaps = 83/291 (28%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553
G + GK VAI+ +K S + +++ L H LV G C P
Sbjct: 38 GVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK---QRP 93
Query: 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNN- 612
I++I EY N L +++ ++ Q + + + +++L S
Sbjct: 94 ----IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE--------SKQF 141
Query: 613 ----LKITDVLLDENFHVKI-----------NSYNLPLLAEARGKG-------SAEVSSP 650
L + L+++ VK+ + Y + EV
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY------TSSVGSKFPVRWSPPEVLMY 195
Query: 651 AKKTSVLARTEQDDKSDVYDIGIILIEII-VGR-P---ITSENVVVLVKD---LLQVNIG 702
+K +S KSD++ G+++ EI +G+ P T+ + L
Sbjct: 196 SKFSS---------KSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRL------ 240
Query: 703 TDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
S++ + +M C + +RP+ + L N+
Sbjct: 241 ----------YRPHL-ASEK-VYTIM---YSCWHEKADERPTFKILLSNIL 276
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 2e-09
Identities = 64/292 (21%), Positives = 108/292 (36%), Gaps = 75/292 (25%)
Query: 494 GQIYKGKLTDG----TLVAIRSLK-MSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDF 548
G +Y G L D A++SL ++ + ++ H N++S LG CL
Sbjct: 39 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR- 97
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
+ ++ Y + LR+FI + T I + + KG+++L
Sbjct: 98 -SEGS----PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA------- 145
Query: 609 FSNN-----LKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKT--------- 654
S L + +LDE F VK+ + L AR E S KT
Sbjct: 146 -SKKFVHRDLAARNCMLDEKFTVKVADFGL-----ARDMYDKEYYSVHNKTGAKLPVKWM 199
Query: 655 ---SVLAR--TEQDDKSDVYDIGIILIEIIV--GRP---ITSENVVVLVKD---LLQVNI 701
S+ + T KSDV+ G++L E++ P + + ++ V + LLQ
Sbjct: 200 ALESLQTQKFTT---KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ--- 253
Query: 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
P C D L +M L+C + + RPS + + +
Sbjct: 254 -----------P---EYCPDP-LYEVM---LKCWHPKAEMRPSFSELVSRIS 287
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 58.4 bits (142), Expect = 2e-09
Identities = 62/291 (21%), Positives = 102/291 (35%), Gaps = 83/291 (28%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553
G + GK VA++ +K S + + + KL H LV G C S + P
Sbjct: 22 GVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVC---SKEYP 77
Query: 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNN- 612
IY++ EY N L +++ G L Q + + +G+ FL S+
Sbjct: 78 ----IYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE--------SHQF 125
Query: 613 ----LKITDVLLDENFHVKI-----------NSYNLPLLAEARGKG------SA-EVSSP 650
L + L+D + VK+ + Y + SA EV
Sbjct: 126 IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY------VSSVGTKFPVKWSAPEVFHY 179
Query: 651 AKKTSVLARTEQDDKSDVYDIGIILIEIIV--GRP---ITSENVVVLVKD---LLQVNIG 702
K +S KSDV+ GI++ E+ P T+ VV+ V L
Sbjct: 180 FKYSS---------KSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRL------ 224
Query: 703 TDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
SD + ++M C P+ RP+ + L +++
Sbjct: 225 ----------YRPHL-ASDT-IYQIM---YSCWHELPEKRPTFQQLLSSIE 260
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 59.1 bits (143), Expect = 2e-09
Identities = 50/281 (17%), Positives = 104/281 (37%), Gaps = 56/281 (19%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYH--IELISKLRHSNL-VSALGHCLDFSL 550
++++ + AI+ + + + + + +Y I ++KL+ + + L D+ +
Sbjct: 70 SKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL---YDYEI 126
Query: 551 DDPSISIIYLIFEYAPNETLRSFISGPG-YKLTWVQRIAAAIAIVKGVQFLHT-GIV--- 605
D IY++ E + L S++ + + ++ V +H GIV
Sbjct: 127 TD---QYIYMVMECGNID-LNSWLKKKKSIDPWERKSYWKNM--LEAVHTIHQHGIVHSD 180
Query: 606 --PG---VFSNNLKITD-----VLLDENFHVKINSYNLPLLAEARGKGSA-----EV--S 648
P + LK+ D + + V +S G+ E
Sbjct: 181 LKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQ----------VGAVNYMPPEAIKD 230
Query: 649 SPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARK 708
+ + + ++++ KSDV+ +G IL + G+ Q I
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT------------PFQQIINQISKLH 278
Query: 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTL 749
+I+DP E D K + ++ CL +PK R S+ + L
Sbjct: 279 AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 58.4 bits (142), Expect = 3e-09
Identities = 59/312 (18%), Positives = 102/312 (32%), Gaps = 106/312 (33%)
Query: 494 GQIYKGKLTDG---TLVAIRSLKMSKKSSPHMYTYHIELISKL-------RHSNLVSALG 543
GQ+ K ++ AI+ +K H + +L H N+++ LG
Sbjct: 39 GQVLKARIKKDGLRMDAAIKRMKEY-----ASKDDHRDFAGELEVLCKLGHHPNIINLLG 93
Query: 544 HCLDFSLDDPSISIIYLIFEYAPNETLRSF---------------ISGPGYKLTWVQRIA 588
C +YL EYAP+ L F + L+ Q +
Sbjct: 94 ACEH---RGY----LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 146
Query: 589 AAIAIVKGVQFLHTGIVPGVFSNNLKITD-----VLLDENFHVKINSYNLPLLAEARGKG 643
A + +G+ +L D +L+ EN+ KI + L +RG+
Sbjct: 147 FAADVARGMDYLS--------QKQFIHRDLAARNILVGENYVAKIADFGL-----SRGQE 193
Query: 644 SAEVSSPAK---K------------TSVLARTEQDDKSDVYDIGIILIEIIV--GRP--- 683
+ + + T+ SDV+ G++L EI+ G P
Sbjct: 194 VYVKKTMGRLPVRWMAIESLNYSVYTT---------NSDVWSYGVLLWEIVSLGGTPYCG 244
Query: 684 ITSENVVVLVKD--LLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKD 741
+T + + L +N C DE + +M +C +P +
Sbjct: 245 MTCAELYEKLPQGYRL---------------EKPLN-CDDE-VYDLM---RQCWREKPYE 284
Query: 742 RPSVEDTLWNLQ 753
RPS L +L
Sbjct: 285 RPSFAQILVSLN 296
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 59.0 bits (142), Expect = 4e-09
Identities = 43/255 (16%), Positives = 80/255 (31%), Gaps = 12/255 (4%)
Query: 87 NNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSN 146
+ L TF S K L+ A L LS
Sbjct: 301 LCDLPAASLNDQLPQHTFRVIWTGSDSQKECVLLKDRPEC-WCRDSATDEQLFRCELSVE 359
Query: 147 YLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTG 206
+ + ++ S + LQ L ++ + + L L S ++
Sbjct: 360 KST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLK--AVDP 416
Query: 207 LQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLH--KKMVTLVLRNNRF 264
+++ + L + L ++RV + L + L L +NR
Sbjct: 417 MRAAYLDDLRSKFLLENSVLKMEYADVRVLHLAHKDLT-VLCHLEQLLLVTHLDLSHNRL 475
Query: 265 QFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGL-LLQNMSC 323
+ P L + L+ L S N + + +LP + L + N+L +Q +
Sbjct: 476 RAL--PPALAALRCLEVLQASDNALE--NVDGVANLPRLQELLLCNNRLQQSAAIQPLVS 531
Query: 324 NPQLAFVDLSSNLLT 338
P+L ++L N L
Sbjct: 532 CPRLVLLNLQGNSLC 546
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 56.3 bits (135), Expect = 2e-08
Identities = 50/309 (16%), Positives = 85/309 (27%), Gaps = 11/309 (3%)
Query: 4 PVDKLHLLVFIILSIIVSAPHSNQLQLFQYQTLVRIQQLLNYPSVSSSFNTTTVTDFCNI 63
P+ + ++L + + + + +
Sbjct: 264 PLTVGSRMGTLLLMVDEAPLSVEWRTPDGRNRPSHVWLCDLPAASLNDQLPQHTFRVIWT 323
Query: 64 EPTPSLTLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLG 123
V +D ++ S + L S K L +
Sbjct: 324 GSDSQKECVLLKDRPECWC---RDSATDEQLFRCELSVEKSTVLQSELESCKELQELEPE 380
Query: 124 LWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLL 183
L I +L+ L L ++ L +KF
Sbjct: 381 NKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRSKFLLENSVLKMEY 440
Query: 184 QVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYF 243
+ VL L + L+ + L L + + LS N L P L L+ L V DN
Sbjct: 441 ADVRVLHLAHKDLT--VLCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNAL 498
Query: 244 G--PRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVG--PFIPSLLS 299
L ++ L+L NNR Q L S +L L++ N L
Sbjct: 499 ENVDGVANL-PRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAE 557
Query: 300 -LPSITYLD 307
LPS++ +
Sbjct: 558 MLPSVSSIL 566
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 4e-09
Identities = 62/294 (21%), Positives = 108/294 (36%), Gaps = 79/294 (26%)
Query: 494 GQIYKGKLTDG----TLVAIRSLK-MSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDF 548
G +Y G L D A++SL ++ + ++ H N++S LG CL
Sbjct: 103 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR- 161
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
+ ++ Y + LR+FI + T I + + KG++FL
Sbjct: 162 -SEGS----PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA------- 209
Query: 609 FSNN-----LKITDVLLDENFHVKI-----------NSYNLPLLAEARGKGSAEVSSPAK 652
S L + +LDE F VK+ ++ K A++ P K
Sbjct: 210 -SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD-----SVHNKTGAKL--PVK 261
Query: 653 KT---SVLAR--TEQDDKSDVYDIGIILIEIIV--GRP---ITSENVVVLVKD---LLQV 699
S+ + T KSDV+ G++L E++ P + + ++ V + LLQ
Sbjct: 262 WMALESLQTQKFTT---KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ- 317
Query: 700 NIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
P C D L +M L+C + + RPS + + +
Sbjct: 318 -------------P---EYCPDP-LYEVM---LKCWHPKAEMRPSFSELVSRIS 351
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 6e-09
Identities = 56/278 (20%), Positives = 106/278 (38%), Gaps = 61/278 (21%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553
G + G G VA++ +K ++ + ++++LRHSNLV LG ++ +
Sbjct: 207 GDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVE---EKG 260
Query: 554 SISIIYLIFEYAPNETLRSFI-SGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNN 612
+ Y++ EY +L ++ S L + ++ + + +++L NN
Sbjct: 261 GL---YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE--------GNN 309
Query: 613 -----LKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSS--PAKKTS--VLARTEQD 663
L +VL+ E+ K++ + L + S + + P K T+ L +
Sbjct: 310 FVHRDLAARNVLVSEDNVAKVSDFGL-----TKEASSTQDTGKLPVKWTAPEALREKKFS 364
Query: 664 DKSDVYDIGIILIEIIV--GRP---ITSENVVVLVKD---LLQVNIGTDEARKSIVDPAV 715
KSDV+ GI+L EI P I ++VV V+ + A
Sbjct: 365 TKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM----------------DAP 408
Query: 716 MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
C + +M C + RP+ L+
Sbjct: 409 DG-CPPA-VYDVM---KNCWHLDAATRPTFLQLREQLE 441
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 7e-09
Identities = 55/232 (23%), Positives = 89/232 (38%), Gaps = 56/232 (24%)
Query: 531 SKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAA 590
S+L H N+VS + D +D YL+ EY TL +I G L+ I
Sbjct: 66 SQLSHQNIVSMI----DVDEED---DCYYLVMEYIEGPTLSEYIESHG-PLSVDTAINFT 117
Query: 591 IAIVKGVQFLHT-GIV-----PGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGS 644
I+ G++ H IV P N +L+D N +KI + + A+
Sbjct: 118 NQILDGIKHAHDMRIVHRDIKPQ----N-----ILIDSNKTLKIFDFGI-----AKALSE 163
Query: 645 AEVSSPAKKTSVL----------ARTEQ-DDKSDVYDIGIILIEIIVGR-PITSENVV-V 691
++ VL A+ E D+ +D+Y IGI+L E++VG P E V +
Sbjct: 164 TSLTQTN---HVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI 220
Query: 692 LVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRP 743
+K + + V + +SL + LR + +R
Sbjct: 221 AIK---HIQDSVPNVT-TDVRKDI-----PQSLS---NVILRATEKDKANRY 260
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 8e-09
Identities = 47/210 (22%), Positives = 80/210 (38%), Gaps = 18/210 (8%)
Query: 135 SSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNN 194
+++ ++ SS L+ +IP I + + + L L NK + L L +L L +N
Sbjct: 15 NNNKNSVDCSSKKLT-AIPSNIPA--DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDN 71
Query: 195 SLSGFLPVSL-TGLQSLRVVSLSANHLSGEIPD--LRNLKNLRVFDVQDNYFG--PR--F 247
L LP + L++L + ++ N L +P L NL + N P F
Sbjct: 72 KLQ-TLPAGIFKELKNLETLWVTDNKLQ-ALPIGVFDQLVNLAELRLDRNQLKSLPPRVF 129
Query: 248 PRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLL--SLPSITY 305
L K+ L L N Q L L++L + N+ +P L +
Sbjct: 130 DSLT-KLTYLSLGYNELQS-LPKGVFDKLTSLKELRLYNNQL--KRVPEGAFDKLTELKT 185
Query: 306 LDIHGNKLTGLLLQNMSCNPQLAFVDLSSN 335
L + N+L + +L + L N
Sbjct: 186 LKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 2e-08
Identities = 47/186 (25%), Positives = 74/186 (39%), Gaps = 27/186 (14%)
Query: 129 PGSIAHSSSLEILNLSSNYLSGSIPVQI-SSLRNLQTLILDDNKFTGAVPSEL-SLLQVL 186
+ + L +L L+ N L ++P I L+NL+TL + DNK A+P + L L
Sbjct: 54 SKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQ-ALPIGVFDQLVNL 111
Query: 187 SVLSLKNNSLSGFLPVSL-TGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGP 245
+ L L N L LP + L L +SL N L +P VFD
Sbjct: 112 AELRLDRNQLK-SLPPRVFDSLTKLTYLSLGYNELQ-SLPK-------GVFD-------- 154
Query: 246 RFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITY 305
+L + L L NN+ + + +L+ L + N+ + SL +
Sbjct: 155 ---KL-TSLKELRLYNNQLK-RVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKM 209
Query: 306 LDIHGN 311
L + N
Sbjct: 210 LQLQEN 215
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 9e-09
Identities = 42/208 (20%), Positives = 77/208 (37%), Gaps = 41/208 (19%)
Query: 494 GQIYKGKLTD-GTLVAIRSLKMSKKSSPHMYT---YHIELISKLRHSNLVSALGHCLDFS 549
+ ++ D + A + + S PH I + L H ++V + +
Sbjct: 55 AKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVV-GFHGFFEDN 113
Query: 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIA--IVKGVQFLHTGIVPG 607
++++ E +L LT + A IV G Q+LH
Sbjct: 114 DF------VFVVLELCRRRSLLELHKRRK-ALT--EPEARYYLRQIVLGCQYLHR---NR 161
Query: 608 VFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPA--KKTS---------- 655
V +LK+ ++ L+E+ VKI + L + +V KK
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFGL----------ATKVEYDGERKKVLCGTPNYIAPE 211
Query: 656 VLARTEQDDKSDVYDIGIILIEIIVGRP 683
VL++ + DV+ IG I+ ++VG+P
Sbjct: 212 VLSKKGHSFEVDVWSIGCIMYTLLVGKP 239
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 9e-09
Identities = 37/188 (19%), Positives = 72/188 (38%), Gaps = 36/188 (19%)
Query: 527 IELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQR 586
+E+ S LRH N++ G+ D + +YLI EYAP T+ + K ++
Sbjct: 60 VEIQSHLRHPNILRLYGY-----FHDATR--VYLILEYAPLGTVYRELQKLS-KFD--EQ 109
Query: 587 IAAAIA--IVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGS 644
A + + + H+ V ++K ++LL +KI + S
Sbjct: 110 RTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGW----------S 156
Query: 645 AEVSSPAKKTS----------VLARTEQDDKSDVYDIGIILIEIIVGR-PITSENVVVLV 693
S + ++ D+K D++ +G++ E +VG+ P +
Sbjct: 157 VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 216
Query: 694 KDLLQVNI 701
K + +V
Sbjct: 217 KRISRVEF 224
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 9e-09
Identities = 57/287 (19%), Positives = 102/287 (35%), Gaps = 73/287 (25%)
Query: 494 GQIYKGKLTDGTL-VAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD 552
G++Y+G +L VA+++LK + ++ +++H NLV LG C + +
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVC---TREP 82
Query: 553 PSISIIYLIFEYAPNETLRSFI-SGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSN 611
P Y+I E+ L ++ +++ V + A I +++L
Sbjct: 83 P----FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--------KK 130
Query: 612 N-----LKITDVLLDENFHVKINSYNLPLLAE-----ARGKG------SA-EVSSPAKKT 654
N L + L+ EN VK+ + L L A +A E + K +
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 655 SVLARTEQDDKSDVYDIGIILIEIIV--GRP---ITSENVVVLVKD---LLQVNIGTDEA 706
KSDV+ G++L EI P I V L++ +
Sbjct: 191 I---------KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM---------- 231
Query: 707 RKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
C ++ + +M C P DRPS + +
Sbjct: 232 ------ERPEG-CPEK-VYELM---RACWQWNPSDRPSFAEIHQAFE 267
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 56.0 bits (136), Expect = 1e-08
Identities = 48/278 (17%), Positives = 92/278 (33%), Gaps = 68/278 (24%)
Query: 494 GQIYKGKLTD-GTLVAIRSLKMSKKSSPHMYT---YHIELISKLRHSNLVSALGHCLDFS 549
+ ++ D + A + + S PH I + L H ++V + +
Sbjct: 29 AKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVV-GFHGFFEDN 87
Query: 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIA--IVKGVQFLHTGIVPG 607
++++ E +L LT + A IV G Q+LH
Sbjct: 88 DF------VFVVLELCRRRSLLELHKRRK-ALT--EPEARYYLRQIVLGCQYLHRN---R 135
Query: 608 VFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPA--KKTS---------- 655
V +LK+ ++ L+E+ VKI + L + +V KK
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFGL----------ATKVEYDGERKKVLCGTPNYIAPE 185
Query: 656 VLARTEQDDKSDVYDIGIILIEIIVGR-PITSENVVVLVKDLLQVNIG-----TDEARKS 709
VL++ + DV+ IG I+ ++VG+ P + + + + A
Sbjct: 186 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAAS- 244
Query: 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVED 747
L + L +P RP++ +
Sbjct: 245 --------------------LIQKMLQTDPTARPTINE 262
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 1e-08
Identities = 34/216 (15%), Positives = 78/216 (36%), Gaps = 35/216 (16%)
Query: 111 LSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQI-SSLRNLQTLILDD 169
S + L L+ L + ++ ++ + +S + + +L + + + +
Sbjct: 30 PPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRN 89
Query: 170 NKFTGAVPSE-LSLLQVLSVLSLKNNSLSGFLPVS-LTGLQSLRVVSLSANHLSGEIPDL 227
+ + + L L +L L + N L F ++ + ++ ++ N IP
Sbjct: 90 TRNLTYIDPDALKELPLLKFLGIFNTGLKMFPDLTKVYSTDIFFILEITDNPYMTSIPV- 148
Query: 228 RNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYN----QLQKLD 283
N F L + +TL L NN F ++ Y +L +
Sbjct: 149 -NA----------------FQGLCNETLTLKLYNNGFT------SVQGYAFNGTKLDAVY 185
Query: 284 ISLNRFVGPFIP--SLLSLPS-ITYLDIHGNKLTGL 316
++ N+++ I + + S + LD+ +T L
Sbjct: 186 LNKNKYLT-VIDKDAFGGVYSGPSLLDVSQTSVTAL 220
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 5e-07
Identities = 30/212 (14%), Positives = 64/212 (30%), Gaps = 26/212 (12%)
Query: 136 SSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL-KNN 194
E ++ + IP S + QTL L + S L +S + + +
Sbjct: 11 HQEEDFRVTCKDIQ-RIP---SLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDV 66
Query: 195 SLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD--LRNLKNLRVFDVQDNYF-----GPRF 247
+L S L + + + I L+ L L+ + + +
Sbjct: 67 TLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKMFPDLTKV 126
Query: 248 PRLHKKMVTLVLRNNRFQFGLNPDELRS-YNQLQKLDISLNRFVGPFIPS-LLSLPSITY 305
+ + N + + + N+ L + N F + + +
Sbjct: 127 YSTDIFFILEITDNPYMTS-IPVNAFQGLCNETLTLKLYNNGF--TSVQGYAFNGTKLDA 183
Query: 306 LDIHGNK-LTGLLLQNMSCNPQLAFVDLSSNL 336
+ ++ NK LT + + AF + S
Sbjct: 184 VYLNKNKYLTVI--------DKDAFGGVYSGP 207
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 4e-06
Identities = 22/145 (15%), Positives = 46/145 (31%), Gaps = 20/145 (13%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLS---LVSLGLWGPLPGSIA 133
L L I N + F T + L++ + S+ +
Sbjct: 106 LLKFLGI---FNTGLK-----MFPDLTKVYSTDIFFILEITDNPYMTSIP-----VNAFQ 152
Query: 134 H-SSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSEL--SLLQVLSVLS 190
+ L L +N + S+ + L + L+ NK+ + + + S+L
Sbjct: 153 GLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLD 211
Query: 191 LKNNSLSGFLPVSLTGLQSLRVVSL 215
+ S++ L L+ L +
Sbjct: 212 VSQTSVTALPSKGLEHLKELIARNT 236
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 1e-08
Identities = 58/284 (20%), Positives = 104/284 (36%), Gaps = 65/284 (22%)
Query: 494 GQIYKGKL-TDGTLVAIRSLKMSKKSSPHMYTYHIE--LISKLRHSNLVSALGHCLDFSL 550
G+++ G+L D TLVA++S + + E ++ + H N+V +G C +
Sbjct: 128 GEVFSGRLRADNTLVAVKSCR-ETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC---TQ 183
Query: 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFS 610
P IY++ E +F+ G +L + G+++L S
Sbjct: 184 KQP----IYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE--------S 231
Query: 611 NN-----LKITDVLLDENFHVKINSYNLPLLAEAR--GKGSAEVSSPAKK-----TS--V 656
L + L+ E +KI+ + + +R G S ++ T+
Sbjct: 232 KCCIHRDLAARNCLVTEKNVLKISDFGM-----SREEADGVYAASGGLRQVPVKWTAPEA 286
Query: 657 LARTEQDDKSDVYDIGIILIEII-VGR---PITSENVVVLVKDLLQVNIGTDEARKSIVD 712
L +SDV+ GI+L E +G P N+ + R+ +
Sbjct: 287 LNYGRYSSESDVWSFGILLWETFSLGASPYP----------------NLSNQQTREFVEK 330
Query: 713 PAVM---NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
+ C D + R+M +C + EP RPS LQ
Sbjct: 331 GGRLPCPELCPDA-VFRLM---EQCWAYEPGQRPSFSTIYQELQ 370
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 1e-08
Identities = 53/300 (17%), Positives = 100/300 (33%), Gaps = 83/300 (27%)
Query: 494 GQIYKGKLTDG----TLVAIRSLKMSKKSSPHMYTYHIE--LISKLRHSNLVSALGHCLD 547
G + +G L VA++++K+ S + + E + H N++ LG C++
Sbjct: 48 GSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIE 107
Query: 548 FSLDDPSISIIYLIFEYAPNETLRSFI-----SGPGYKLTWVQRIAAAIAIVKGVQFLHT 602
+ I +I + L +++ + + + I G+++L
Sbjct: 108 --MSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS- 164
Query: 603 GIVPGVFSNN-----LKITDVLLDENFHVKI-----------NSYNLPLLAEARGKGSAE 646
+ N L + +L ++ V + Y R A+
Sbjct: 165 -------NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDY-------YRQGRIAK 210
Query: 647 VSSPAKKT---SVLAR--TEQDDKSDVYDIGIILIEII-VGRP----ITSENVVVLVKD- 695
+ P K S+ R T KSDV+ G+ + EI G + + + +
Sbjct: 211 M--PVKWIAIESLADRVYTS---KSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHG 265
Query: 696 --LLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
L Q P +C DE L +M C +P DRP+ L+
Sbjct: 266 HRLKQ--------------PE---DCLDE-LYEIM---YSCWRTDPLDRPTFSVLRLQLE 304
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 1e-08
Identities = 48/287 (16%), Positives = 95/287 (33%), Gaps = 70/287 (24%)
Query: 494 GQIYKGKLTDG-----TLVAIRSLKM-SKKSSPHMYTYHIELISKLRHSNLVSALGHCLD 547
G +YKG VAI+ L+ + + +++ + + ++ LG CL
Sbjct: 29 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 88
Query: 548 FSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPG 607
+ LI + P L ++ + + + I KG+ +L
Sbjct: 89 ----ST----VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE------ 134
Query: 608 VFSNNLKITD-----VLLDENFHVKINSYNLPLLAEAR--GKGSAEVSSPAKKTSV---- 656
L D VL+ HVKI + L A+ G E + K +
Sbjct: 135 --DRRLVHRDLAARNVLVKTPQHVKITDFGL-----AKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 657 ---LARTEQDDKSDVYDIGIILIEIIV--GRP---ITSENVVVLVKD---LLQVNIGTDE 705
+ +SDV+ G+ + E++ +P I + + +++ L Q
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ------- 240
Query: 706 ARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNL 752
P C+ + + +M +C + RP + +
Sbjct: 241 -------P---PICTID-VYMIM---RKCWMIDADSRPKFRELIIEF 273
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 3e-08
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 13/119 (10%)
Query: 128 LPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLS 187
+ +++ + + L LS+N + I +S + NL+ L L N + + ++ L
Sbjct: 40 MDATLSTLKACKHLALSTNNIE-KI-SSLSGMENLRILSLGRNLIK-KIENLDAVADTLE 96
Query: 188 VLSLKNN---SLSGFLPVSLTGLQSLRVVSLSANHLS--GEIPDLRNLKNLRVFDVQDN 241
L + N SLSG + L +LRV+ +S N ++ GEI L L L + N
Sbjct: 97 ELWISYNQIASLSG-----IEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGN 150
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 8e-07
Identities = 28/155 (18%), Positives = 62/155 (40%), Gaps = 12/155 (7%)
Query: 171 KFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNL 230
+ V +E ++ L + + +L+ L++ + ++LS N++ +I L +
Sbjct: 16 ERKSVVATEAEKVE----LHGMIPPIEK-MDATLSTLKACKHLALSTNNIE-KISSLSGM 69
Query: 231 KNLRVFDVQDNYFG--PRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNR 288
+NLR+ + N + + L + N+ + + L+ L +S N+
Sbjct: 70 ENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIA---SLSGIEKLVNLRVLYMSNNK 126
Query: 289 FVGPF-IPSLLSLPSITYLDIHGNKLTGLLLQNMS 322
I L +L + L + GN L +N +
Sbjct: 127 ITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNA 161
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 5e-06
Identities = 30/135 (22%), Positives = 55/135 (40%), Gaps = 12/135 (8%)
Query: 106 STLGSLSSLKVLSLVSLGLWGPLPGSI---AHSSSLEILNLSSNYLSGSIPVQISSLRNL 162
+TL +L + K L+L + + I + +L IL+L N + I + L
Sbjct: 42 ATLSTLKACKHLALSTNNI-----EKISSLSGMENLRILSLGRNLIK-KIENLDAVADTL 95
Query: 163 QTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVS-LTGLQSLRVVSLSANHLS 221
+ L + N+ S + L L VL + NN ++ + + L L L + L+ N L
Sbjct: 96 EELWISYNQIA--SLSGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLY 153
Query: 222 GEIPDLRNLKNLRVF 236
+ + R+
Sbjct: 154 NDYKENNATSEYRIE 168
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 8e-06
Identities = 24/105 (22%), Positives = 45/105 (42%), Gaps = 13/105 (12%)
Query: 141 LNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFL 200
L+ + + +S+L+ + L L N S LS ++ L +LSL N +
Sbjct: 30 LHGMIPPIEK-MDATLSTLKACKHLALSTNNIE--KISSLSGMENLRILSLGRNLIK--- 83
Query: 201 PVSLTGL----QSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDN 241
+ L +L + +S N ++ + + L NLRV + +N
Sbjct: 84 --KIENLDAVADTLEELWISYNQIA-SLSGIEKLVNLRVLYMSNN 125
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 4e-08
Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 5/109 (4%)
Query: 136 SSLEILNLSSN-YLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNN 194
S ++ L L ++ G + L+ L + T + L L L L L +N
Sbjct: 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDN 74
Query: 195 SLSGFLPVSLTGLQSLRVVSLSANHLS--GEIPDLRNLKNLRVFDVQDN 241
+SG L V +L ++LS N + I L+ L+NL+ D+ +
Sbjct: 75 RVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNC 123
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 2e-04
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 108 LGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLIL 167
L+ LS +++GL + + + L+ L LS N +SG + V NL L L
Sbjct: 38 TDEFEELEFLSTINVGL-TSIAN-LPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95
Query: 168 DDNKFTG-AVPSELSLLQVLSVLSLKNN 194
NK + L L+ L L L N
Sbjct: 96 SGNKIKDLSTIEPLKKLENLKSLDLFNC 123
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 2e-04
Identities = 27/141 (19%), Positives = 48/141 (34%), Gaps = 21/141 (14%)
Query: 179 ELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDV 238
S ++ L + + ++N L + L +S L+ I +L L L+ ++
Sbjct: 15 TPSDVKELVLDNSRSNEGK--LEGLTDEFEELEFLSTINVGLT-SIANLPKLNKLKKLEL 71
Query: 239 QDNY---FGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLN-------- 287
DN + L L N+ + + L+ L+ LD+
Sbjct: 72 SDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDY 131
Query: 288 -RFVGPFIPSLLSLPSITYLD 307
V LP +TYLD
Sbjct: 132 RENV------FKLLPQLTYLD 146
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 40.0 bits (94), Expect = 5e-04
Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
Query: 256 TLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTG 315
LVL N+R G + +L+ L I +L L + L++ N+++G
Sbjct: 21 ELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTS--IANLPKLNKLKKLELSDNRVSG 78
Query: 316 LLLQNMSCNPQLAFVDLSSNLLT 338
L P L ++LS N +
Sbjct: 79 GLEVLAEKCPNLTHLNLSGNKIK 101
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 5e-08
Identities = 47/287 (16%), Positives = 97/287 (33%), Gaps = 70/287 (24%)
Query: 494 GQIYKGKLTDG-----TLVAIRSLK-MSKKSSPHMYTYHIELISKLRHSNLVSALGHCLD 547
G ++KG V I+ ++ S + S T H+ I L H+++V LG C
Sbjct: 27 GTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG 86
Query: 548 FSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPG 607
+ L+ +Y P +L + L + + I KG+ +L
Sbjct: 87 ----SS----LQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE------ 132
Query: 608 VFSNNLKITD-----VLLDENFHVKINSYNLPLLAEAR--GKGSAEVSSPAKKTSV---- 656
+ + + VLL V++ + + A ++ KT +
Sbjct: 133 --EHGMVHRNLAARNVLLKSPSQVQVADFGV-----ADLLPPDDKQLLYSEAKTPIKWMA 185
Query: 657 ---LARTEQDDKSDVYDIGIILIEIIV--GRP---ITSENVVVLVKD---LLQVNIGTDE 705
+ + +SDV+ G+ + E++ P + V L++ L Q
Sbjct: 186 LESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQ------- 238
Query: 706 ARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNL 752
C+ + + +M ++C + RP+ ++
Sbjct: 239 ----------PQICTID-VYMVM---VKCWMIDENIRPTFKELANEF 271
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 53.7 bits (130), Expect = 7e-08
Identities = 45/278 (16%), Positives = 105/278 (37%), Gaps = 67/278 (24%)
Query: 494 GQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTY---HIELISKLRHSNLVSALGHCLDFS 549
+Y+ + + G VAI+ + M +++ +L+H +++ +
Sbjct: 25 AGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNY----- 79
Query: 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIA--IVKGVQFLHTGIVPG 607
+D + +YL+ E N + ++ + + A I+ G+ +LH+ G
Sbjct: 80 FEDSNY--VYLVLEMCHNGEMNRYLKNRVKPFS--ENEARHFMHQIITGMLYLHS---HG 132
Query: 608 VFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPA--KKTS---------- 655
+ +L ++++LL N ++KI + L + ++ P T
Sbjct: 133 ILHRDLTLSNLLLTRNMNIKIADFGL----------ATQLKMPHEKHYTLCGTPNYISPE 182
Query: 656 VLARTEQDDKSDVYDIGIILIEIIVGR-PITSENVVVLVKDLLQVNIG-----TDEARKS 709
+ R+ +SDV+ +G + +++GR P ++ V + ++ + + EA+
Sbjct: 183 IATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDL 242
Query: 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVED 747
I ++ L P DR S+
Sbjct: 243 I--------------HQL-------LRRNPADRLSLSS 259
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 8e-08
Identities = 21/115 (18%), Positives = 46/115 (40%), Gaps = 15/115 (13%)
Query: 494 GQIYKGKLTD--------GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHC 545
+I+KG + T V ++ L + ++ + ++SKL H +LV G C
Sbjct: 22 TKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVC 81
Query: 546 LDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFL 600
+ D L+ E+ +L +++ + + ++ A + + FL
Sbjct: 82 VC---GDE----NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFL 129
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 8e-08
Identities = 59/309 (19%), Positives = 105/309 (33%), Gaps = 96/309 (31%)
Query: 494 GQIYKGKLTDG------TLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLD 547
G+++ + + LVA+++LK ++ + EL++ L+H ++V G C D
Sbjct: 29 GKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGD 88
Query: 548 FSLDDPSISIIYLIFEYAPNETLRSF---------------ISGPGYKLTWVQRIAAAIA 592
DP + ++FEY + L F +L Q + A
Sbjct: 89 ---GDP----LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQ 141
Query: 593 IVKGVQFLHTGIVPGVFSNN-----LKITDVLLDENFHVKI-----------NSYNLPLL 636
I G+ +L S + L + L+ N VKI Y
Sbjct: 142 IASGMVYLA--------SQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDY----- 188
Query: 637 AEARGKG-------SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV--GRP---I 684
G E K T+ +SDV+ G+IL EI +P +
Sbjct: 189 YRVGGHTMLPIRWMPPESIMYRKFTT---------ESDVWSFGVILWEIFTYGKQPWFQL 239
Query: 685 TSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPS 744
++ V+ + + + P C E + +M L C EP+ R +
Sbjct: 240 SNTEVIECITQ-----------GRVLERPR---VCPKE-VYDVM---LGCWQREPQQRLN 281
Query: 745 VEDTLWNLQ 753
+++ L
Sbjct: 282 IKEIYKILH 290
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 53.6 bits (129), Expect = 1e-07
Identities = 38/238 (15%), Positives = 76/238 (31%), Gaps = 49/238 (20%)
Query: 137 SLEILNLSSNYLSG----SIPVQISSLRNLQTLILDDNKFTG----AVPSELSLLQVLSV 188
S+E +L + ++ S+ + +++ ++L N + ++ + L +
Sbjct: 5 SIEGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEI 64
Query: 189 LSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPR-- 246
+ L+ L L A L L + DN FGP
Sbjct: 65 AEFSDIFTGRVKDEIPEALRLL----LQA---------LLKCPKLHTVRLSDNAFGPTAQ 111
Query: 247 -----FPRLHKKMVTLVLRNNRF------------QFGLNPDELRSYNQLQKLDISLNRF 289
F H + L L NN Q + ++ L+ + NR
Sbjct: 112 EPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRL 171
Query: 290 ----VGPFIPSLLSLPSITYLDIHGNKLT-----GLLLQNMSCNPQLAFVDLSSNLLT 338
+ + + S + + + N + LLL+ ++ +L +DL N T
Sbjct: 172 ENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFT 229
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 5e-07
Identities = 54/322 (16%), Positives = 97/322 (30%), Gaps = 81/322 (25%)
Query: 117 LSLVSLGLWG---------PLPGSIAHSSSLEILNLSSNYLSG----SIPVQISSLRNLQ 163
S+ L + + S++ + LS N + + I+S ++L+
Sbjct: 4 FSIEGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLE 63
Query: 164 TLILDDNKFTGAVPSE-----------LSLLQVLSVLSLKNNSLS--GFLPVS--LTGLQ 208
D FTG V E L L + L +N+ P+ L+
Sbjct: 64 IAEFSDI-FTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHT 122
Query: 209 SLRVVSLSANHLSGE--------------IPDLRNLKNLRVFDVQDNYFGP-------RF 247
L + L N L + +N LR N +
Sbjct: 123 PLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKT 182
Query: 248 PRLHKKMVTLVLRNNRFQFGLNPDE---------LRSYNQLQKLDISLNRF----VGPFI 294
+ H+ + T+ + N + E L +L+ LD+ N F
Sbjct: 183 FQSHRLLHTVKMVQNGIR-----PEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALA 237
Query: 295 PSLLSLPSITYLDIHGNKLT-------GLLLQNMSCNPQLAFVDLSSNLLTG----YLPS 343
+L S P++ L ++ L+ + N L + L N + L +
Sbjct: 238 IALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLE-NIGLQTLRLQYNEIELDAVRTLKT 296
Query: 344 CLQVEAKTRLVLY-SKNCLSNE 364
+ + L L + N S E
Sbjct: 297 VIDEKMPDLLFLELNGNRFSEE 318
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 3e-06
Identities = 43/295 (14%), Positives = 84/295 (28%), Gaps = 74/295 (25%)
Query: 108 LGSLSSLKVLSLVSLGLWGP----------LPGSIAHSSSLEILNLSSNYLSGSIPVQIS 157
+ S L++ + L ++ L + LS N + +
Sbjct: 56 IASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLI 115
Query: 158 SL----RNLQTLILDDNKFT-------------GAVPSELSLLQVLSVLSLKNNSLSG-- 198
L+ L L +N AV + L + N L
Sbjct: 116 DFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGS 175
Query: 199 --FLPVSLTGLQSLRVVSLSANHLSGE-----IPD-LRNLKNLRVFDVQDNYFGP----- 245
+ + L V + N + E + + L + L+V D+QDN F
Sbjct: 176 MKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSA 235
Query: 246 --RFPRLHKKMVTLVLRNNR------------FQFGLNPDELRSYNQLQKLDISLNRFVG 291
+ + L L + F N LQ L + N
Sbjct: 236 LAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENI-------GLQTLRLQYNEIEL 288
Query: 292 PFIPSLLS-----LPSITYLDIHGNKLT------GLLLQNMSCNPQLAFVDLSSN 335
+ +L + +P + +L+++GN+ + + + S + +L
Sbjct: 289 DAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDVVDEIREVFSTRGRGELDELDDM 343
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 2e-05
Identities = 40/257 (15%), Positives = 78/257 (30%), Gaps = 46/257 (17%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLV--SLGLWG--PLPGSI 132
+L + + + L L + L + G PL +
Sbjct: 61 DLEIAEFSDIFTGRVKDEIPEALRL--LLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFL 118
Query: 133 AHSSSLEILNLSSNYLS-------------GSIPVQISSLRNLQTLILDDNKFT--GAVP 177
+ + LE L L +N L ++ + + L+++I N+
Sbjct: 119 SKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKE 178
Query: 178 --SELSLLQVLSVLSLKNNSL-----SGFLPVSLTGLQSLRVVSLSANHLSGE----IPD 226
++L + + N + L L Q L+V+ L N + +
Sbjct: 179 WAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 238
Query: 227 -LRNLKNLRVFDVQDNYFGPR---------FPRLHKKMVTLVLRNNRF-QFGLNP--DEL 273
L++ NLR + D R + + TL L+ N + +
Sbjct: 239 ALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVI 298
Query: 274 RSYN-QLQKLDISLNRF 289
L L+++ NRF
Sbjct: 299 DEKMPDLLFLELNGNRF 315
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 53.2 bits (128), Expect = 1e-07
Identities = 42/306 (13%), Positives = 84/306 (27%), Gaps = 56/306 (18%)
Query: 494 GQIYKG--KLTDGTLVAIRSLKMSKKSSPHMYTYH-IELISKLRHSNLVSALGHCLDFSL 550
+++G K T G L AI+ P E++ KL H N+V
Sbjct: 23 ANVFRGRHKKT-GDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF----AI-E 76
Query: 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIA--IVKGVQFLHT-GIV-- 605
++ + LI E+ P +L + + P + + +V G+ L GIV
Sbjct: 77 EETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHR 136
Query: 606 ---PGVFSNNLKITDVLLDENFHVKI------NSYNLPLLAEARGKGSAEVSSP----AK 652
PG N +++ D K+ + G+ E P
Sbjct: 137 NIKPG---NIMRVIGE--DGQSVYKLTDFGAARELEDDEQFVSL-YGTEEYLHPDMYERA 190
Query: 653 KTSVLARTEQDDKSDVYDIGIILIEIIVGRP-----------------ITSENVVVLVKD 695
+ + D++ IG+ G I + +
Sbjct: 191 VLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISG 250
Query: 696 LLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTL---WNL 752
+ + G + + S + + L + + + ++
Sbjct: 251 VQKAENGPIDWSGDMPVS---CSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307
Query: 753 QFATQI 758
Sbjct: 308 LHRGNS 313
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 53.2 bits (127), Expect = 1e-07
Identities = 16/94 (17%), Positives = 31/94 (32%), Gaps = 1/94 (1%)
Query: 151 SIPVQISSLRNLQTLILDDNKFTGAVPSE-LSLLQVLSVLSLKNNSLSGFLPVSLTGLQS 209
+ NL L +++ + + L L L L++ + L P +
Sbjct: 22 DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPR 81
Query: 210 LRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYF 243
L ++LS N L +L+ + N
Sbjct: 82 LSRLNLSFNALESLSWKTVQGLSLQELVLSGNPL 115
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 50.1 bits (119), Expect = 2e-06
Identities = 20/93 (21%), Positives = 36/93 (38%), Gaps = 2/93 (2%)
Query: 129 PGSIAHSSSLEILNLSSNYLSGSIP-VQISSLRNLQTLILDDNKFTGAVPSELSLLQVLS 187
+ + +L L + + + + L L+ L + + P LS
Sbjct: 24 LHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLS 83
Query: 188 VLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHL 220
L+L N+L ++ GL SL+ + LS N L
Sbjct: 84 RLNLSFNALESLSWKTVQGL-SLQELVLSGNPL 115
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 44.7 bits (105), Expect = 7e-05
Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 12/97 (12%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSS 136
NLT+L+I +N ++ + L L+ L++V GL P + +
Sbjct: 32 NLTELYI--ENQQHL-----QHLELRDL----RGLGELRNLTIVKSGLRFVAPDAFHFTP 80
Query: 137 SLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFT 173
L LNLS N L S+ + +LQ L+L N
Sbjct: 81 RLSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPLH 116
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 43.6 bits (102), Expect = 2e-04
Identities = 20/96 (20%), Positives = 37/96 (38%), Gaps = 6/96 (6%)
Query: 245 PRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIP--SLLSLPS 302
P + + L + N + L +LR +L+ L I + F+ + P
Sbjct: 25 HHLPGA-ENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR--FVAPDAFHFTPR 81
Query: 303 ITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLT 338
++ L++ N L L + + L + LS N L
Sbjct: 82 LSRLNLSFNALESLSWKTVQ-GLSLQELVLSGNPLH 116
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 42.0 bits (98), Expect = 5e-04
Identities = 19/90 (21%), Positives = 32/90 (35%), Gaps = 1/90 (1%)
Query: 269 NPDELRSYNQLQKLDISLNRFVGPFIP-SLLSLPSITYLDIHGNKLTGLLLQNMSCNPQL 327
+ L L +L I + + L L + L I + L + P+L
Sbjct: 23 SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRL 82
Query: 328 AFVDLSSNLLTGYLPSCLQVEAKTRLVLYS 357
+ ++LS N L +Q + LVL
Sbjct: 83 SRLNLSFNALESLSWKTVQGLSLQELVLSG 112
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 53.7 bits (129), Expect = 2e-07
Identities = 49/291 (16%), Positives = 98/291 (33%), Gaps = 78/291 (26%)
Query: 494 GQIYKGKLTDG----TLVAIRSLKMSKKSSPHMYTYHIELIS------KLRHSNLVSALG 543
G +++G VAI++ K + + + + H ++V +G
Sbjct: 404 GDVHQGIYMSPENPAMAVAIKTCKNC-----TSDSVREKFLQEALTMRQFDHPHIVKLIG 458
Query: 544 HCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTG 603
+ +P +++I E LRSF+ + L I A + + +L
Sbjct: 459 VITE----NP----VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE-- 508
Query: 604 IVPGVFSNN-----LKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSS------PAK 652
S + +VL+ N VK+ + L +R + P K
Sbjct: 509 ------SKRFVHRDIAARNVLVSSNDCVKLGDFGL-----SRYMEDSTYYKASKGKLPIK 557
Query: 653 KTS--VLARTEQDDKSDVYDIGIILIEIIV--GRP---ITSENVVVLVKD---LLQVNIG 702
+ + SDV+ G+ + EI++ +P + + +V+ +++ L
Sbjct: 558 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL------ 611
Query: 703 TDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
P N C L +M +C + +P RP + L
Sbjct: 612 ----------PMPPN-CPPT-LYSLM---TKCWAYDPSRRPRFTELKAQLS 647
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 2e-07
Identities = 57/313 (18%), Positives = 101/313 (32%), Gaps = 105/313 (33%)
Query: 494 GQIYKGKLTDG------TLVAIRSLKMSKKSSPHMYT---YHIELISKLRHSNLVSALGH 544
G+++ + + LVA+ K K++S EL++ L+H ++V G
Sbjct: 55 GKVFLAECHNLLPEQDKMLVAV---KALKEASESARQDFQREAELLTMLQHQHIVRFFGV 111
Query: 545 CLDFSLDDPSISIIYLIFEYAPNETLRSF--------------ISGPGYKLTWVQRIAAA 590
C + P + ++FEY + L F L Q +A A
Sbjct: 112 CTE---GRP----LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164
Query: 591 IAIVKGVQFLHTGIVPGVFSNN-----LKITDVLLDENFHVKI-----------NSYNLP 634
+ G+ +L + L + L+ + VKI Y
Sbjct: 165 SQVAAGMVYLA--------GLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDY--- 213
Query: 635 LLAEARGKG-------SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV--GRP-- 683
G+ E K T+ +SDV+ G++L EI +P
Sbjct: 214 --YRVGGRTMLPIRWMPPESILYRKFTT---------ESDVWSFGVVLWEIFTYGKQPWY 262
Query: 684 -ITSENVVVLVKD--LLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPK 740
+++ + + L+ P C E + +M C EP+
Sbjct: 263 QLSNTEAIDCITQGRELER-------------PR---ACPPE-VYAIM---RGCWQREPQ 302
Query: 741 DRPSVEDTLWNLQ 753
R S++D LQ
Sbjct: 303 QRHSIKDVHARLQ 315
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 2e-07
Identities = 58/309 (18%), Positives = 102/309 (33%), Gaps = 101/309 (32%)
Query: 494 GQIYKGKLTDG------TLVAIRSLKMSKKSSPHMYT---YHIELISKLRHSNLVSALGH 544
G +Y+G T VAI+++ + +S ++ + ++V LG
Sbjct: 39 GMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEFLNEASVMKEFNCHHVVRLLGV 96
Query: 545 CLDFSLDDPSISIIYLIFEYAPNETLRSFI---------SGPGYKLTWVQRIAAAIAIVK 595
P +I E L+S++ + + + I A I
Sbjct: 97 VSQ---GQP----TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 149
Query: 596 GVQFLHTGIVPGVFSNN-----LKITDVLLDENFHVKI-----------NSYNLPLLAEA 639
G+ +L+ +N L + ++ E+F VKI Y
Sbjct: 150 GMAYLN--------ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY-----YRK 196
Query: 640 RGKG-------SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV--GRP---ITSE 687
GKG S E T+ SDV+ G++L EI +P +++E
Sbjct: 197 GGKGLLPVRWMSPESLKDGVFTT---------YSDVWSFGVVLWEIATLAEQPYQGLSNE 247
Query: 688 NVVVLVKD---LLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPS 744
V+ V + L + P C D + EL C PK RPS
Sbjct: 248 QVLRFVMEGGLLDK--------------PD---NCPDM----LFELMRMCWQYNPKMRPS 286
Query: 745 VEDTLWNLQ 753
+ + +++
Sbjct: 287 FLEIISSIK 295
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 2e-07
Identities = 48/287 (16%), Positives = 96/287 (33%), Gaps = 70/287 (24%)
Query: 494 GQIYKGKLTDG-----TLVAIRSLKM-SKKSSPHMYTYHIELISKLRHSNLVSALGHCLD 547
G +YKG VAI+ L+ + + +++ + + ++ LG CL
Sbjct: 29 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 88
Query: 548 FSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPG 607
+ LI + P L ++ + + + I KG+ +L
Sbjct: 89 ----ST----VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE------ 134
Query: 608 VFSNNLKITD-----VLLDENFHVKINSYNLPLLAEAR--GKGSAEVSSPAKKTSV---- 656
L D VL+ HVKI + L A+ G E + K +
Sbjct: 135 --DRRLVHRDLAARNVLVKTPQHVKITDFGL-----AKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 657 ---LARTEQDDKSDVYDIGIILIEIIV--GRP---ITSENVVVLVKD---LLQVNIGTDE 705
+ +SDV+ G+ + E++ +P I + + +++ L Q
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ------- 240
Query: 706 ARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNL 752
P C+ + + +M ++C + RP + +
Sbjct: 241 -------PP---ICTID-VYMIM---VKCWMIDADSRPKFRELIIEF 273
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 53.5 bits (128), Expect = 2e-07
Identities = 46/290 (15%), Positives = 89/290 (30%), Gaps = 41/290 (14%)
Query: 494 GQIYKG--KLTDGTLVAIRSLKMSKKSSPHMYTYH-IELISKLRHSNLVSALGHCLDFSL 550
G + + + T G VAI+ + I+++ KL H N+V + D
Sbjct: 28 GYVLRWIHQDT-GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV-SAREVPDGLQ 85
Query: 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIA--IVKGVQFLHT-GIVPG 607
+ L EY LR +++ + + I +++LH I+
Sbjct: 86 KLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIH- 144
Query: 608 VFSNNLKITDVLLDENFH---VKI------NSYNLPLLAEARGKGSAEVSSPAKKTSVLA 658
+LK +++L KI + L G+ + +P +L
Sbjct: 145 ---RDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEF-VGTLQYLAP----ELLE 196
Query: 659 RTEQDDKSDVYDIGIILIEIIVG-RPITSENVVVLVKDLL-----------QVNIGTDEA 706
+ + D + G + E I G RP V + G +
Sbjct: 197 QKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKF 256
Query: 707 RKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756
+ P ++ L+R ++ L + R + F
Sbjct: 257 SSVLPTPNHLSGILAGKLERWLQCMLMW---HQRQRGTDPQNPNVGCFQA 303
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 2e-07
Identities = 20/111 (18%), Positives = 43/111 (38%), Gaps = 12/111 (10%)
Query: 494 GQIYKGKLTDG---TLVAIRSLKM-SKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFS 549
G + +G VAI+ LK ++K+ +++ +L + +V +G C
Sbjct: 24 GSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-- 81
Query: 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFL 600
+ + L+ E A L F+ G ++ + G+++L
Sbjct: 82 --EA----LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL 126
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 2e-07
Identities = 28/147 (19%), Positives = 51/147 (34%), Gaps = 28/147 (19%)
Query: 494 GQIYKGKLT----DGTLVAIRSLK---MSKKSSPHMYTYHIELISKLRHSNLVSALGHCL 546
G + +G+ VA++ LK +S+ + + + + L H NL+ G L
Sbjct: 32 GVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL 91
Query: 547 DFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVP 606
P + ++ E AP +L + A+ + +G+ +L
Sbjct: 92 T----PP----MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE----- 138
Query: 607 GVFSNNLKITD-----VLLDENFHVKI 628
S D +LL VKI
Sbjct: 139 ---SKRFIHRDLAARNLLLATRDLVKI 162
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 52.1 bits (125), Expect = 3e-07
Identities = 26/218 (11%), Positives = 58/218 (26%), Gaps = 54/218 (24%)
Query: 531 SKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISG---PGYKLTWVQRI 587
S++ + LD + ++ E+ +L+ P + +Q +
Sbjct: 86 SRIDKPGVAR----VLDVVHTR---AGGLVVAEWIRGGSLQEVADTSPSPVGAIRAMQSL 138
Query: 588 AAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEV 647
AAA + P V + + V +
Sbjct: 139 AAAADAAHRAGVALSIDHPS---------RVRVSIDGDVVL--------------AYPAT 175
Query: 648 SSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGR-PITSENVVVLVKDLLQVNIGTDEA 706
A + + D+ IG L ++V R P+ V + +
Sbjct: 176 MPDA-----------NPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERD-TAGQPI 223
Query: 707 RKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPS 744
+ +D + + S + R + + R +
Sbjct: 224 EPADIDRDIPFQIS--------AVAARSVQGDGGIRSA 253
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 3e-07
Identities = 61/314 (19%), Positives = 100/314 (31%), Gaps = 105/314 (33%)
Query: 494 GQIYKGKLTD------GTLVAIRSLKMSKKSSPHMYTYHIELISKL-------RHSNLVS 540
G++ + VA+ KM K + L+S+L +H N+V+
Sbjct: 60 GKVVEATAFGLGKEDAVLKVAV---KMLKST--AHADEKEALMSELKIMSHLGQHENIVN 114
Query: 541 ALGHCLDFSLDDPSISIIYLIFEYAPNETLRSF-------------ISGPGYKLTWVQRI 587
LG C + P + +I EY L +F + + +
Sbjct: 115 LLGAC---THGGP----VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLL 167
Query: 588 AAAIAIVKGVQFLHTGIVPGVFSNNLKITD-----VLLDENFHVKI------------NS 630
+ + +G+ FL S N D VLL KI ++
Sbjct: 168 HFSSQVAQGMAFLA--------SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 219
Query: 631 YNLPLLAEARGKGSAEVSSPAKKTSVLARTEQ--DDKSDVYDIGIILIEII-VGR----- 682
Y KG+A + P K + + + +SDV+ GI+L EI +G
Sbjct: 220 Y--------IVKGNARL--PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 269
Query: 683 PITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM---NECSDESLKRMMELCLRCLSNEP 739
+ + LVKD G M + +M C + EP
Sbjct: 270 ILVNSKFYKLVKD------GY-----------QMAQPAFAPKN-IYSIM---QACWALEP 308
Query: 740 KDRPSVEDTLWNLQ 753
RP+ + LQ
Sbjct: 309 THRPTFQQICSFLQ 322
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 51.9 bits (124), Expect = 4e-07
Identities = 35/299 (11%), Positives = 80/299 (26%), Gaps = 66/299 (22%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMY------TYHIELISKLRH--------- 535
+ G + +++ + + L+ +++
Sbjct: 85 DPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLR 144
Query: 536 ----SNLVSALGHCLDFSL----DDPSISIIYLIFEYAPN------ETLRSFISGPGYKL 581
+LV + D + + ++ + E L S S L
Sbjct: 145 FIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHK-SL 203
Query: 582 TWVQRIAAAIAIVKGVQFLHT-GIVPGVFSNNLKITDVLLDENFHVKIN--SYNLPLLAE 638
R+ + +++ + LH G+V L+ D++LD+ V + + + A
Sbjct: 204 VHHARLQLTLQVIRLLASLHHYGLVHT----YLRPVDIVLDQRGGVFLTGFEHLVRDGAR 259
Query: 639 ARGKGSAEVSSP-------AKKTSVLARTEQDDKSDVYDIGIILIEIIVGR-PITSENVV 690
S P RT D + +G+++ I PIT + +
Sbjct: 260 VVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAAL 319
Query: 691 VLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTL 749
+ + + + L L +DR +
Sbjct: 320 GGSEWIFRSCKNIPQ------------PVRA--------LLEGFLRYPKEDRLLPLQAM 358
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 4e-07
Identities = 27/146 (18%), Positives = 56/146 (38%), Gaps = 27/146 (18%)
Query: 494 GQIYKGKLTDG----TLVAIRSLKMSKKSSPHMYTYHIE--LISKLRHSNLVSALGHCLD 547
G++ G+L VAI++LK + + + E ++ + H N++ G
Sbjct: 63 GEVCYGRLRVPGQRDVPVAIKALK-AGYTERQRRDFLSEASIMGQFDHPNIIRLEGVV-- 119
Query: 548 FSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPG 607
+ ++ EY N +L +F+ + T +Q + + G+++L
Sbjct: 120 -TRGRL----AMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS------ 168
Query: 608 VFSNN-----LKITDVLLDENFHVKI 628
L +VL+D N K+
Sbjct: 169 --DLGYVHRDLAARNVLVDSNLVCKV 192
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 5e-07
Identities = 58/314 (18%), Positives = 107/314 (34%), Gaps = 105/314 (33%)
Query: 494 GQIYKGKLTDG------TLVAIRSLKMSKKSSPHMYT---YHIELISKLRHSNLVSALGH 544
G++YKG L VAI++LK K+ + + L ++L+H N+V LG
Sbjct: 23 GKVYKGHLFGPAPGEQTQAVAIKTLK--DKAEGPLREEFRHEAMLRARLQHPNVVCLLGV 80
Query: 545 CLDFSLDDPSISIIYLIFEYAPNETLRSF---------------ISGPGYKLTWVQRIAA 589
D P + +IF Y + L F L +
Sbjct: 81 VTK---DQP----LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 133
Query: 590 AIAIVKGVQFLHTGIVPGVFSNN-----LKITDVLLDENFHVKI-----------NSYNL 633
I G+++L S++ L +VL+ + +VKI Y
Sbjct: 134 VAQIAAGMEYLS--------SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADY-- 183
Query: 634 PLLAEARGKG-------SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV--GRP- 683
+ G + E K + SD++ G++L E+ +P
Sbjct: 184 ---YKLLGNSLLPIRWMAPEAIMYGKFSI---------DSDIWSYGVVLWEVFSYGLQPY 231
Query: 684 --ITSENVVVLVKD--LLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEP 739
++++VV ++++ +L P + C + +M + C + P
Sbjct: 232 CGYSNQDVVEMIRNRQVL---------------PCPDD-CPAW-VYALM---IECWNEFP 271
Query: 740 KDRPSVEDTLWNLQ 753
RP +D L+
Sbjct: 272 SRRPRFKDIHSRLR 285
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 5e-07
Identities = 59/288 (20%), Positives = 111/288 (38%), Gaps = 69/288 (23%)
Query: 494 GQIYKGKLT----DGTLVAIRSLKMSKKSSPHMYTYHIE--LISKLRHSNLVSALGHCLD 547
G++ G+L VAI++LK+ + + E ++ + H N++ G
Sbjct: 59 GEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGVV-- 115
Query: 548 FSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPG 607
+ P + ++ EY N +L SF+ + T +Q + I G+++L
Sbjct: 116 -TKSKP----VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS------ 164
Query: 608 VFSNN-----LKITDVLLDENFHVKINSYNL-------PLLAEARGKGSAEVSSPAKKTS 655
L ++L++ N K++ + L P A G P + TS
Sbjct: 165 --DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGG----KIPIRWTS 218
Query: 656 --VLARTEQDDKSDVYDIGIILIEIIV--GRP---ITSENVVVLVKD---LLQVNIGTDE 705
+A + SDV+ GI+L E++ RP +++++V+ V + L
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL--------- 269
Query: 706 ARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
P M+ C L ++M L C + +RP E + L
Sbjct: 270 -------PPPMD-CPAA-LYQLM---LDCWQKDRNNRPKFEQIVSILD 305
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 5e-07
Identities = 34/169 (20%), Positives = 65/169 (38%), Gaps = 35/169 (20%)
Query: 527 IELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQR 586
IE+ S LRH N++ + D IYL+ E+AP L + G + ++
Sbjct: 65 IEIQSHLRHPNILRMYNY-----FHDRKR--IYLMLEFAPRGELYKELQKHG-RFD--EQ 114
Query: 587 IAAAIA--IVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGS 644
+A + + + H V ++K ++L+ +KI + S
Sbjct: 115 RSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGW----------S 161
Query: 645 AEVSSPAKKTS----------VLARTEQDDKSDVYDIGIILIEIIVGRP 683
S ++T ++ D+K D++ G++ E +VG P
Sbjct: 162 VHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMP 210
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 7e-07
Identities = 62/319 (19%), Positives = 114/319 (35%), Gaps = 112/319 (35%)
Query: 494 GQIYKGKLTD--------GTLVAIRSLKMSKKSSPHMYTYHIELISKL-------RHSNL 538
GQ+ + VA++ LK +L+S++ +H N+
Sbjct: 49 GQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-----ATEKDLSDLVSEMEMMKMIGKHKNI 103
Query: 539 VSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSF---------------ISGPGYKLTW 583
++ LG C + D P +Y+I EYA LR + P ++T+
Sbjct: 104 INLLGAC---TQDGP----LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 584 VQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKIT--D-----VLLDENFHVKI-------- 628
++ + +G+++L + K D VL+ EN +KI
Sbjct: 157 KDLVSCTYQLARGMEYL----------ASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 629 ----NSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQ--DDKSDVYDIGIILIEIIV-- 680
+ Y + + + P K + A ++ +SDV+ G+++ EI
Sbjct: 207 INNIDYY--------KKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 681 GRP---ITSENVVVLVKD---LLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRC 734
G P I E + L+K+ + + PA C++E L MM C
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDK--------------PA---NCTNE-LYMMM---RDC 295
Query: 735 LSNEPKDRPSVEDTLWNLQ 753
P RP+ + + +L
Sbjct: 296 WHAVPSQRPTFKQLVEDLD 314
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 8e-07
Identities = 31/147 (21%), Positives = 59/147 (40%), Gaps = 28/147 (19%)
Query: 494 GQIYKGKLTDGT-----LVAIRSLKMSKKSSPHMYTYHIE--LISKLRHSNLVSALGHCL 546
G++YKG L + VAI++LK + + E ++ + H N++ G
Sbjct: 58 GEVYKGMLKTSSGKKEVPVAIKTLKAGY-TEKQRVDFLGEAGIMGQFSHHNIIRLEGVI- 115
Query: 547 DFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVP 606
S P + +I EY N L F+ + + +Q + I G+++L
Sbjct: 116 --SKYKP----MMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA----- 164
Query: 607 GVFSNN-----LKITDVLLDENFHVKI 628
+ N L ++L++ N K+
Sbjct: 165 ---NMNYVHRDLAARNILVNSNLVCKV 188
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 9e-07
Identities = 61/316 (19%), Positives = 113/316 (35%), Gaps = 106/316 (33%)
Query: 494 GQIYKGKLTD--------GTLVAIRSLKMSKKSSPHMYT---YHIELISKL-RHSNLVSA 541
GQ+ + VA++ LK ++ + +E++ + +H N+++
Sbjct: 95 GQVVMAEAVGIDKDKPKEAVTVAVKMLK--DDATEKDLSDLVSEMEMMKMIGKHKNIINL 152
Query: 542 LGHCLDFSLDDPSISIIYLIFEYAPNETLRSF---------------ISGPGYKLTWVQR 586
LG C D P +Y+I EYA LR + P ++T+
Sbjct: 153 LGACTQ---DGP----LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 205
Query: 587 IAAAIAIVKGVQFLHTGIVPGVFSNNLKIT--D-----VLLDENFHVKI----------- 628
++ + +G+++L + K D VL+ EN +KI
Sbjct: 206 VSCTYQLARGMEYL----------ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN 255
Query: 629 -NSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQ--DDKSDVYDIGIILIEIIV--GRP 683
+ Y + + + P K + A ++ +SDV+ G+++ EI G P
Sbjct: 256 IDYY--------KKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 305
Query: 684 ---ITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM---NECSDESLKRMMELCLRCLSN 737
I E + L+K+ G M C++E L MM C
Sbjct: 306 YPGIPVEELFKLLKE------GH-----------RMDKPANCTNE-LYMMM---RDCWHA 344
Query: 738 EPKDRPSVEDTLWNLQ 753
P RP+ + + +L
Sbjct: 345 VPSQRPTFKQLVEDLD 360
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 9e-07
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 6/114 (5%)
Query: 129 PGSIAHSSSLEILNLSSNYLSGSIPVQI-SSLRNLQTLILDDNKFTGAVPSELSLLQVLS 187
PG+ + L ++LS+N +S + LR+L +L+L NK T S L L
Sbjct: 49 PGAFSPYKKLRRIDLSNNQIS-ELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQ 107
Query: 188 VLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLS----GEIPDLRNLKNLRVFD 237
+L L N ++ + L +L ++SL N L G LR ++ + +
Sbjct: 108 LLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQ 161
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 1e-06
Identities = 34/168 (20%), Positives = 61/168 (36%), Gaps = 24/168 (14%)
Query: 144 SSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVS 203
L+ IP + + + L+ N P S + L + L NN +S P +
Sbjct: 19 RGKGLT-EIPTNLPE--TITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDA 75
Query: 204 LTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNR 263
GL+SL + L N ++ E+P +F+ L + L+L N+
Sbjct: 76 FQGLRSLNSLVLYGNKIT-ELPK-------SLFE-----------GLF-SLQLLLLNANK 115
Query: 264 FQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGN 311
L D + + L L + N+ + L +I + + N
Sbjct: 116 IN-CLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQN 162
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 1e-04
Identities = 31/165 (18%), Positives = 64/165 (38%), Gaps = 31/165 (18%)
Query: 175 AVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD--LRNLKN 232
+P+ L + ++ + L+ N++ P + + + LR + LS N +S E+ + L++
Sbjct: 25 EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQIS-ELAPDAFQGLRS 81
Query: 233 LRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGP 292
L +LVL N+ L LQ L ++ N+
Sbjct: 82 LN---------------------SLVLYGNKITE-LPKSLFEGLFSLQLLLLNANKINC- 118
Query: 293 FIP--SLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSN 335
+ + L ++ L ++ NKL + S + + L+ N
Sbjct: 119 -LRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQN 162
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 8e-04
Identities = 29/120 (24%), Positives = 43/120 (35%), Gaps = 11/120 (9%)
Query: 76 DNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHS 135
+L +NN I + D F L SL L L +
Sbjct: 53 SPYKKLRRIDLSNNQI-----SELAPDAF----QGLRSLNSLVLYGNKITELPKSLFEGL 103
Query: 136 SSLEILNLSSNYLSGSIPVQI-SSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNN 194
SL++L L++N ++ + V L NL L L DNK S L+ + + L N
Sbjct: 104 FSLQLLLLNANKIN-CLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQN 162
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396 | Back alignment and structure |
|---|
Score = 50.6 bits (121), Expect = 1e-06
Identities = 47/289 (16%), Positives = 84/289 (29%), Gaps = 47/289 (16%)
Query: 494 GQIYKG--KLTDGTLVAIRSLKMSKKSSPHMYTYH-IELISKLRHSNLVSALGHCLDFSL 550
+++G K T G L AI+ P E++ KL H N+V L
Sbjct: 23 ANVFRGRHKKT-GDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV-----KLFAIE 76
Query: 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIA--IVKGVQFLHT-GIV-- 605
++ + LI E+ P +L + + P + + +V G+ L GIV
Sbjct: 77 EETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHR 136
Query: 606 ---PGVFSNNLKITDVLLDENFHVKI------NSYNLPLLAEARGKGSAEVSSP----AK 652
PG N +++ D K+ + G+ E P
Sbjct: 137 NIKPG---NIMRVIGE--DGQSVYKLTDFGAARELEDDEQFVSL-YGTEEYLHPDMYERA 190
Query: 653 KTSVLARTEQDDKSDVYDIGIILIEIIVGRP------ITSENVVVLVK--------DLLQ 698
+ + D++ IG+ G N V+ K +
Sbjct: 191 VLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISG 250
Query: 699 VNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVED 747
V + D V S + + L + + +
Sbjct: 251 VQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQ 299
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 1e-06
Identities = 54/311 (17%), Positives = 100/311 (32%), Gaps = 95/311 (30%)
Query: 494 GQIYKGKLTD------GTLVAIRSLKMSKKSSPHMYTYH----IELISKL-RHSNLVSAL 542
G++ + VA+ KM K S+ ++++S L H N+V+ L
Sbjct: 37 GKVVEATAYGLIKSDAAMTVAV---KMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLL 93
Query: 543 GHCLDFSLDDPSISIIYLIFEYAPNETLRSF-----------------ISGPGYKLTWVQ 585
G C ++ P +I EY L +F + L
Sbjct: 94 GAC---TIGGP----TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 146
Query: 586 RIAAAIAIVKGVQFLHTGIVPGVFSNNLKIT--D-----VLLDENFHVKIN----SYNLP 634
++ + + KG+ FL + D +LL KI + ++
Sbjct: 147 LLSFSYQVAKGMAFL----------ASKNCIHRDLAARNILLTHGRITKICDFGLARDIK 196
Query: 635 LLAEARGKGSAEVSSPAKKTSVLARTEQ--DDKSDVYDIGIILIEIIV-------GRPIT 685
+ KG+A + P K + + +SDV+ GI L E+ G P
Sbjct: 197 NDSNYVVKGNARL--PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP-V 253
Query: 686 SENVVVLVKD---LLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDR 742
++K+ +L P E + +M C +P R
Sbjct: 254 DSKFYKMIKEGFRMLS--------------PE---HAPAE-MYDIM---KTCWDADPLKR 292
Query: 743 PSVEDTLWNLQ 753
P+ + + ++
Sbjct: 293 PTFKQIVQLIE 303
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 50.8 bits (121), Expect = 1e-06
Identities = 29/242 (11%), Positives = 71/242 (29%), Gaps = 45/242 (18%)
Query: 533 LRHSNLVSALGHCLDFSL----DDPSISIIYLIFEYAPN------ETLRSFISGPGYKLT 582
+ +LV + D + + ++ + E L S S L
Sbjct: 151 IFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHK-SLV 209
Query: 583 WVQRIAAAIAIVKGVQFLHT-GIVPGVFSNNLKITDVLLDENFHVKI------NSYNLPL 635
R+ + +++ + LH G+V L+ D++LD+ V +
Sbjct: 210 HHARLQLTLQVIRLLASLHHYGLVHT----YLRPVDIVLDQRGGVFLTGFEHLVRDGASA 265
Query: 636 LAEA-RGKGSAEVSSPAKKTSVLARTEQDDK-SDVYDIGIILIEIIVGR-PITSENVVVL 692
++ RG E ++ D + +G+ + I P T + +
Sbjct: 266 VSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGG 325
Query: 693 VKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNL 752
+ + + + ++++ L +DR +
Sbjct: 326 SEWIFRSCKNIPQPVRALL--------------------EGFLRYPKEDRLLPLQAMETP 365
Query: 753 QF 754
++
Sbjct: 366 EY 367
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 1e-06
Identities = 35/182 (19%), Positives = 69/182 (37%), Gaps = 33/182 (18%)
Query: 135 SSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPS-ELSLLQVLSVLSLKN 193
++ S+ L+ IP I L L++N+FT + L L ++ N
Sbjct: 10 RCEGTTVDCSNQKLN-KIPEHIPQ--YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSN 66
Query: 194 NSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKK 253
N ++ + G + + L++N L + ++F L
Sbjct: 67 NKITDIEEGAFEGASGVNEILLTSNRLE-NVQH-------KMFK-----------GLE-S 106
Query: 254 MVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRF----VGPFIPSLLSLPSITYLDIH 309
+ TL+LR+NR + D + ++ L + N+ G F +L S++ L++
Sbjct: 107 LKTLMLRSNRITC-VGNDSFIGLSSVRLLSLYDNQITTVAPGAFD----TLHSLSTLNLL 161
Query: 310 GN 311
N
Sbjct: 162 AN 163
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 49.5 bits (119), Expect = 2e-06
Identities = 52/294 (17%), Positives = 101/294 (34%), Gaps = 86/294 (29%)
Query: 494 GQIYKGKLTDG----TLVAIRSLKMSKKSSPHMYTYHIELIS------KLRHSNLVSALG 543
G +++G VAI++ K + + + + H ++V +G
Sbjct: 29 GDVHQGIYMSPENPALAVAIKTCKNC-----TSDSVREKFLQEALTMRQFDHPHIVKLIG 83
Query: 544 HCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTG 603
+ +P +++I E LRSF+ Y L I A + + +L
Sbjct: 84 VITE----NP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE-- 133
Query: 604 IVPGVFSNN-----LKITDVLLDENFHVKINSYNL-PLLAE----ARGKG-------SAE 646
S + +VL+ N VK+ + L + + KG + E
Sbjct: 134 ------SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 187
Query: 647 VSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV--GRP---ITSENVVVLVKD---LLQ 698
+ + TS SDV+ G+ + EI++ +P + + +V+ +++ L
Sbjct: 188 SINFRRFTS---------ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL-- 236
Query: 699 VNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNL 752
P N C L +M +C + +P RP + L
Sbjct: 237 --------------PMPPN-CPPT-LYSLM---TKCWAYDPSRRPRFTELKAQL 271
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 2e-06
Identities = 66/317 (20%), Positives = 113/317 (35%), Gaps = 108/317 (34%)
Query: 494 GQIYKGKLTD--------GTLVAIRSLKMSKKSSPHMYTYHIELISKL-------RHSNL 538
GQ+ + T VA+ KM K + +LIS++ +H N+
Sbjct: 83 GQVVLAEAIGLDKDKPNRVTKVAV---KMLKSDA--TEKDLSDLISEMEMMKMIGKHKNI 137
Query: 539 VSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSF---------------ISGPGYKLTW 583
++ LG C + D P +Y+I EYA LR + P +L+
Sbjct: 138 INLLGAC---TQDGP----LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 190
Query: 584 VQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITD-----VLLDENFHVKI---------- 628
++ A + +G+++L S D VL+ E+ +KI
Sbjct: 191 KDLVSCAYQVARGMEYLA--------SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 242
Query: 629 --NSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQ--DDKSDVYDIGIILIEIIV--GR 682
+ Y + G P K + A ++ +SDV+ G++L EI G
Sbjct: 243 HIDYY------KKTTNGRL----PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS 292
Query: 683 P---ITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM---NECSDESLKRMMELCLRCLS 736
P + E + L+K+ G M + C++E L MM C
Sbjct: 293 PYPGVPVEELFKLLKE------GH-----------RMDKPSNCTNE-LYMMM---RDCWH 331
Query: 737 NEPKDRPSVEDTLWNLQ 753
P RP+ + + +L
Sbjct: 332 AVPSQRPTFKQLVEDLD 348
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 2e-06
Identities = 68/322 (21%), Positives = 113/322 (35%), Gaps = 113/322 (35%)
Query: 494 GQIYKGKLTDG------TLVAIRSLKMSKKSSPHMYTYH----IELISKLRHSNLVSALG 543
G++ K T VA+ KM K+++ ++ ++ H +++ G
Sbjct: 37 GKVVKATAFHLKGRAGYTTVAV---KMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYG 93
Query: 544 HCLDFSLDDPSISIIYLIFEYAPNETLRSF-----------------------ISGPGYK 580
C S D P + LI EYA +LR F
Sbjct: 94 AC---SQDGP----LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 581 LTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKIT--D-----VLLDENFHVKI----- 628
LT I+ A I +G+Q+L +K+ D +L+ E +KI
Sbjct: 147 LTMGDLISFAWQISQGMQYL----------AEMKLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 629 -------NSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQ--DDKSDVYDIGIILIEII 679
+SY + + P K ++ + + +SDV+ G++L EI+
Sbjct: 197 SRDVYEEDSY--------VKRSQGRI--PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
Query: 680 V--GRP---ITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM---NECSDESLKRMMELC 731
G P I E + L+K G M + CS+E + R+M
Sbjct: 247 TLGGNPYPGIPPERLFNLLKT------GH-----------RMERPDNCSEE-MYRLM--- 285
Query: 732 LRCLSNEPKDRPSVEDTLWNLQ 753
L+C EP RP D +L+
Sbjct: 286 LQCWKQEPDKRPVFADISKDLE 307
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 2e-06
Identities = 25/123 (20%), Positives = 44/123 (35%), Gaps = 26/123 (21%)
Query: 494 GQIYKGKLTDG------TLVAIRSLKMSKKSSPHMYTYH----IELISKLRHSNLVSALG 543
G++Y+G+++ VA+ K + +ISK H N+V +G
Sbjct: 44 GEVYEGQVSGMPNDPSPLQVAV---KTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIG 100
Query: 544 HCLDFSLDDPSISIIYLIFEYAPNETLRSFI------SGPGYKLTWVQRIAAAIAIVKGV 597
L P +++ E L+SF+ L + + A I G
Sbjct: 101 VSLQ---SLP----RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153
Query: 598 QFL 600
Q+L
Sbjct: 154 QYL 156
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 3e-06
Identities = 25/145 (17%), Positives = 57/145 (39%), Gaps = 26/145 (17%)
Query: 494 GQIYKGKLTDG----TLVAIRSLKM-SKKSSPHMYTYHIELISKLRHSNLVSALGHCLDF 548
G++Y+G T+ VA+++ K + + ++ L H ++V +G +
Sbjct: 26 GEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE- 84
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
+P ++I E P L ++ L + + ++ I K + +L
Sbjct: 85 ---EP----TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE------- 130
Query: 609 FSNN-----LKITDVLLDENFHVKI 628
S N + + ++L+ VK+
Sbjct: 131 -SINCVHRDIAVRNILVASPECVKL 154
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 3e-06
Identities = 38/252 (15%), Positives = 87/252 (34%), Gaps = 57/252 (22%)
Query: 527 IELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPG-YKLTWVQ 585
+++I+ +++ ++ G + + +Y+I+EY N+++ F +
Sbjct: 94 LQIITDIKNEYCLTCEGI-----ITNYDE--VYIIYEYMENDSILKFDEYFFVLDKNYTC 146
Query: 586 RIAAAIA------IVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEA 639
I + ++ ++H + ++K +++L+D+N VK++ +
Sbjct: 147 FIPIQVIKCIIKSVLNSFSYIHNEK--NICHRDVKPSNILMDKNGRVKLSDFGE------ 198
Query: 640 RGKGSAEVSSPAKKTS----------VLARTEQDD--KSDVYDIGIILIEIIVGRP--IT 685
S + K S + + K D++ +GI L +
Sbjct: 199 ----SEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSL 254
Query: 686 SENVVVLVKDLLQVNI-------GTDEARKSIVDPAVMNECSDES---LKRMMELCLRCL 735
++V L ++ NI + N S+E LK L
Sbjct: 255 KISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLF-------L 307
Query: 736 SNEPKDRPSVED 747
P +R + ED
Sbjct: 308 RKNPAERITSED 319
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 4e-06
Identities = 41/278 (14%), Positives = 82/278 (29%), Gaps = 63/278 (22%)
Query: 492 SHGQIYKG-KLTDGTLVAIRSLKMSKKSSPHMYTYHIE---LISKLRHSNLVSALGHCLD 547
S+G+++K DG L A++ + E +H V
Sbjct: 69 SYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQA--- 125
Query: 548 FSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIA-IVKGVQFLHTGIVP 606
+ I+YL E +L+ G L ++ + + + LH
Sbjct: 126 WEEGG----ILYLQTELC-GPSLQQHCEAWGASLP-EAQVWGYLRDTLLALAHLH----- 174
Query: 607 GVFSNN-----LKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSV----- 656
S +K ++ L K+ + L E+ +
Sbjct: 175 ---SQGLVHLDVKPANIFLGPRGRCKLGDFGL----------LVELGTAGAGEVQEGDPR 221
Query: 657 -----LARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIV 711
L + +DV+ +G+ ++E+ + G + R+ +
Sbjct: 222 YMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGE------------GWQQLRQGYL 269
Query: 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTL 749
P S E + + + L +PK R + E L
Sbjct: 270 PPEFTAGLSSE----LRSVLVMMLEPDPKLRATAEALL 303
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 4e-06
Identities = 25/123 (20%), Positives = 43/123 (34%), Gaps = 26/123 (21%)
Query: 494 GQIYKGKLTDG------TLVAIRSLKMSKKSSPHMYTYH----IELISKLRHSNLVSALG 543
G++Y+G+++ VA+ K + +ISK H N+V +G
Sbjct: 85 GEVYEGQVSGMPNDPSPLQVAV---KTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIG 141
Query: 544 HCLDFSLDDPSISIIYLIFEYAPNETLRSF------ISGPGYKLTWVQRIAAAIAIVKGV 597
L P +++ E L+SF L + + A I G
Sbjct: 142 VSLQ---SLP----RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 194
Query: 598 QFL 600
Q+L
Sbjct: 195 QYL 197
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 48.8 bits (116), Expect = 5e-06
Identities = 20/111 (18%), Positives = 43/111 (38%), Gaps = 12/111 (10%)
Query: 494 GQIYKGKLTDG---TLVAIRSLKM-SKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFS 549
G + +G VAI+ LK ++K+ +++ +L + +V +G C
Sbjct: 350 GSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-- 407
Query: 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFL 600
+ + L+ E A L F+ G ++ + G+++L
Sbjct: 408 --EA----LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL 452
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 8e-06
Identities = 42/207 (20%), Positives = 87/207 (42%), Gaps = 25/207 (12%)
Query: 494 GQIYKGK-LTDGTLVAIRSLKMS--KKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550
G+++K + G VA++ + M K+ P I+++ L+H N+V+ + C +
Sbjct: 31 GEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKAS 90
Query: 551 DD-PSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVF 609
IYL+F++ ++ L +S K T + ++ G+ ++H +
Sbjct: 91 PYNRCKGSIYLVFDFCEHD-LAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KIL 146
Query: 610 SNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSV------------L 657
++K +VL+ + +K+ + L AR A+ S P + T+ L
Sbjct: 147 HRDMKAANVLITRDGVLKLADFGL-----ARAFSLAKNSQPNRYTNRVVTLWYRPPELLL 201
Query: 658 ARTEQDDKSDVYDIGIILIEIIVGRPI 684
+ D++ G I+ E+ PI
Sbjct: 202 GERDYGPPIDLWGAGCIMAEMWTRSPI 228
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 8e-06
Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 18/89 (20%)
Query: 494 GQIYKGKLTDG------TLVAIRSLKMSKKSSPHMYT---YHIELISKLRHSNLVSALGH 544
G++++ + T+VA++ LK +++S M L+++ + N+V LG
Sbjct: 61 GRVFQARAPGLLPYEPFTMVAVKMLK--EEASADMQADFQREAALMAEFDNPNIVKLLGV 118
Query: 545 CLDFSLDDPSISIIYLIFEYAPNETLRSF 573
C P + L+FEY L F
Sbjct: 119 CAV---GKP----MCLLFEYMAYGDLNEF 140
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 9e-06
Identities = 42/293 (14%), Positives = 93/293 (31%), Gaps = 43/293 (14%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLR-HSNLVSALGHCLDFS 549
+Y+ + + G A++ L +++ + + KL H N+V
Sbjct: 40 GFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGK 99
Query: 550 LDDPSISIIYLIFEYAPNETLRSFI--SGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPG 607
+ + +L+ L F+ L+ + + VQ +H P
Sbjct: 100 EESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR-QKPP 158
Query: 608 VFSNNLKITDVLLDENFHVKI--------NSYNLPLLAEARGKGSAEVSSPAKKTS---- 655
+ +LK+ ++LL +K+ S+ A+ + E + T+
Sbjct: 159 IIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVE-EEITRNTTPMYR 217
Query: 656 ------VLARTEQDDKSDVYDIGIILIEIIVGR-PITSENVVVLVKDLLQVNIGTDEARK 708
+ + +K D++ +G IL + + P + +V +
Sbjct: 218 TPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVN-----------GKY 266
Query: 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQGL 761
SI L L P++R S+ + + LQ + +
Sbjct: 267 SIPPHDTQYT-------VFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNV 312
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 1e-05
Identities = 43/257 (16%), Positives = 77/257 (29%), Gaps = 58/257 (22%)
Query: 132 IAHSSSLEILNLSSNYLSGSIPVQISSL-----RNLQTLILDDNKFTGAVPSEL-SLLQV 185
+ + L+LS N L V++ ++ +L L N EL +L
Sbjct: 18 TSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAA 77
Query: 186 ----LSVLSLKNNS--------LSGFLPVSLTGLQSLRVVSLSANHLSGE-IPDL----- 227
++ L+L N L L + L L N S + +
Sbjct: 78 IPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLD---LGWNDFSSKSSSEFKQAFS 134
Query: 228 RNLKNLRVFDVQDNYFGPR--------FPRLHKKMVTLVLRNNRFQFGLNPDE------- 272
++ +++ N G + + + +L LR N +
Sbjct: 135 NLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLA-----SKNCAELAK 189
Query: 273 -LRSYNQ-LQKLDISLNRF----VGPFIPSLLSLP-SITYLDIHGNKLTG----LLLQNM 321
L S + LD+S N S+P + L++ N L G L
Sbjct: 190 FLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLK 249
Query: 322 SCNPQLAFVDLSSNLLT 338
L V L +++
Sbjct: 250 DSLKHLQTVYLDYDIVK 266
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 1e-05
Identities = 35/231 (15%), Positives = 72/231 (31%), Gaps = 58/231 (25%)
Query: 532 KLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAI 591
+L+ ++V DF D +Y+ L + + G L + +A
Sbjct: 90 RLQEPHVVPIH----DFGEID---GQLYVDMRLINGVDLAAMLRRQG-PLAPPRAVAIVR 141
Query: 592 AIVKGVQFLHT-GIV-----PGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSA 645
I + H G P N +L+ + + + + A
Sbjct: 142 QIGSALDAAHAAGATHRDVKPE----N-----ILVSADDFAYLVDFGI-----ASATTDE 187
Query: 646 EVSSPAKKTSVLART------EQ------DDKSDVYDIGIILIEIIVGR-PITSENVVVL 692
+++ T E+ ++D+Y + +L E + G P + + V+
Sbjct: 188 KLTQ----LGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVM 243
Query: 693 VKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRP 743
+ Q R S V P + + + R ++ P+DR
Sbjct: 244 GAHINQ-----AIPRPSTVRPGI-----PVAFD---AVIARGMAKNPEDRY 281
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 47.3 bits (111), Expect = 1e-05
Identities = 28/154 (18%), Positives = 57/154 (37%), Gaps = 19/154 (12%)
Query: 111 LSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQI--SSLRNLQTLILD 168
L ++ +L+ + + L +L+ L + S L S+ I S L NL+ L+L
Sbjct: 168 LDAMPLLNNLKIKGTNNLSIGKKPRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLY 227
Query: 169 ---DNKFTGAVPSELSLLQV------LSVLSLKNNSLSGFLPVSL---TGLQSLRVVSLS 216
++ + L L L + + + L L + +S
Sbjct: 228 VGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDIS 287
Query: 217 ANHLSGE-----IPDLRNLKNLRVFDVQDNYFGP 245
A L+ E + + +K+L+ +++ NY
Sbjct: 288 AGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 46.9 bits (110), Expect = 1e-05
Identities = 38/214 (17%), Positives = 72/214 (33%), Gaps = 35/214 (16%)
Query: 144 SSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLS----LKNNSLSGF 199
+ ++ I + + L D F S + + + VL L N + G
Sbjct: 123 DCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGT 182
Query: 200 LPVSLTGLQS--LRVVSLSANHLSGEIP------DLRNLKNLRVFDVQDNYFGPRFPRLH 251
+S+ L+ + + + L + DL NL+ L ++ ++Y +
Sbjct: 183 NNLSIGKKPRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNV- 241
Query: 252 KKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLS---LPSITYLDI 308
+ +RF L+ L I + L LP + +DI
Sbjct: 242 ---FRPLFSKDRFP------------NLKWLGIVDAEEQNVVVEMFLESDILPQLETMDI 286
Query: 309 HGNKLTG----LLLQNMSCNPQLAFVDLSSNLLT 338
LT LLL ++ L F+++ N L+
Sbjct: 287 SAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 1e-05
Identities = 60/316 (18%), Positives = 102/316 (32%), Gaps = 106/316 (33%)
Query: 494 GQIYKGKLTD------GTLVAIRSLKMSKKSSPHMYTYHIELISKL-------RHSNLVS 540
GQ+ + VA++ LK ++ H L+S+L H N+V+
Sbjct: 41 GQVIEADAFGIDKTATCRTVAVKMLKEG-----ATHSEHRALMSELKILIHIGHHLNVVN 95
Query: 541 ALGHCLDFSLDDPSISIIYLIFEYAPNETLRSF---------------ISGPGYKLTWVQ 585
LG C P + +I E+ L ++ LT
Sbjct: 96 LLGACTK--PGGP----LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 586 RIAAAIAIVKGVQFLHTGIVPGVFSNNLKIT--D-----VLLDENFHVKI---------- 628
I + + KG++FL + K D +LL E VKI
Sbjct: 150 LICYSFQVAKGMEFL----------ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 199
Query: 629 --NSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQ--DDKSDVYDIGIILIEII-VGR- 682
Y KG A + P K + ++ +SDV+ G++L EI +G
Sbjct: 200 KDPDY--------VRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 249
Query: 683 --PITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM---NECSDESLKRMMELCLRCLSN 737
P + + + + M + + E + + M L C
Sbjct: 250 PYPGVKIDEEFC---------------RRLKEGTRMRAPDYTTPE-MYQTM---LDCWHG 290
Query: 738 EPKDRPSVEDTLWNLQ 753
EP RP+ + + +L
Sbjct: 291 EPSQRPTFSELVEHLG 306
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 2e-05
Identities = 65/325 (20%), Positives = 104/325 (32%), Gaps = 118/325 (36%)
Query: 494 GQIYKGKLTDG------TLVAIRSLKMSKKSSPHMYTYHIELISKL-------RHSNLVS 540
G++ VA+ KM K+ + L+S+L H N+V+
Sbjct: 59 GKVMNATAYGISKTGVSIQVAV---KMLKEK--ADSSEREALMSELKMMTQLGSHENIVN 113
Query: 541 ALGHCLDFSLDDPSISIIYLIFEYAPNETLRSF----------------------ISGPG 578
LG C +L P IYLIFEY L ++
Sbjct: 114 LLGAC---TLSGP----IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 166
Query: 579 YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKIT--D-----VLLDENFHVKI--- 628
LT+ + A + KG++FL D VL+ VKI
Sbjct: 167 NVLTFEDLLCFAYQVAKGMEFL----------EFKSCVHRDLAARNVLVTHGKVVKICDF 216
Query: 629 ---------NSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQ--DDKSDVYDIGIILIE 677
++Y +G+A + P K + + E KSDV+ GI+L E
Sbjct: 217 GLARDIMSDSNY--------VVRGNARL--PVKWMAPESLFEGIYTIKSDVWSYGILLWE 266
Query: 678 IIV--GRP----ITSENVVVLVKD---LLQVNIGTDEARKSIVDPAVMNECSDESLKRMM 728
I P N L+++ + Q P ++E + +M
Sbjct: 267 IFSLGVNPYPGIPVDANFYKLIQNGFKMDQ--------------PF---YATEE-IYIIM 308
Query: 729 ELCLRCLSNEPKDRPSVEDTLWNLQ 753
C + + + RPS + L
Sbjct: 309 ---QSCWAFDSRKRPSFPNLTSFLG 330
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 5e-05
Identities = 26/118 (22%), Positives = 49/118 (41%), Gaps = 11/118 (9%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550
++G +Y G+ L++ +AI+ + I L L+H N+V LG
Sbjct: 34 TYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLG----SFS 89
Query: 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIA--IVKGVQFLHT-GIV 605
++ I I E P +L + + L ++ I++G+++LH IV
Sbjct: 90 ENGFIKI---FMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIV 144
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 7e-05
Identities = 38/284 (13%), Positives = 82/284 (28%), Gaps = 71/284 (25%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550
S G++++ K G A++ +++ + + L +V G
Sbjct: 70 SFGEVHRMKDKQTGFQCAVKKVRLEVFRVEE-----LVACAGLSSPRIVPLYG----AVR 120
Query: 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIA--IVKGVQFLHTGIVPGV 608
+ P ++I E +L I G L + A ++G+++LH
Sbjct: 121 EGPWVNI---FMELLEGGSLGQLIKQMG-CLP--EDRALYYLGQALEGLEYLH------- 167
Query: 609 FSNN-----LKITDVLLDEN-FHVKINSYNLPLLAE----ARGKGSAEVSSPAKKTS--- 655
+ +K +VLL + L + + S
Sbjct: 168 -TRRILHGDVKADNVLLSSDGSRAA--------LCDFGHALCLQPDGLGKSLLTGDYIPG 218
Query: 656 --------VLARTEQDDKSDVYDIGIILIEIIVGRP--ITSENVVVLVKDLLQVNIGTDE 705
V+ D K D++ +++ ++ G + +K I ++
Sbjct: 219 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLK------IASEP 272
Query: 706 ARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTL 749
+ C+ + L EP R S +
Sbjct: 273 PPI----REIPPSCAPL----TAQAIQEGLRKEPVHRASAMELR 308
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 7e-05
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 139 EILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSG 198
L L N + +P ++S+ ++L + L +N+ + S + L L L N L
Sbjct: 34 TELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRC 92
Query: 199 FLPVSLTGLQSLRVVSLSANHLSGEIPD--LRNLKNL 233
P + GL+SLR++SL N +S +P+ +L L
Sbjct: 93 IPPRTFDGLKSLRLLSLHGNDIS-VVPEGAFNDLSAL 128
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 6e-04
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 128 LPGSIAHSSSLEILNLSSNYLSGSIPVQI-SSLRNLQTLILDDNKFTGAVPSEL--SLLQ 184
+P +++ L +++LS+N +S ++ Q S++ L TLIL N+ +P L
Sbjct: 46 VPKELSNYKHLTLIDLSNNRIS-TLSNQSFSNMTQLLTLILSYNRLR-CIPPRTFDGLKS 103
Query: 185 VLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSAN 218
L +LSL N +S + L +L +++ AN
Sbjct: 104 -LRLLSLHGNDISVVPEGAFNDLSALSHLAIGAN 136
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 1e-04
Identities = 19/112 (16%), Positives = 37/112 (33%), Gaps = 14/112 (12%)
Query: 494 GQIYKGKLTDG---TLVAIRSLKMSKKSSPHMYTYHIE--LISKLRHSNLVSALGHCLDF 548
G + KG VA++ LK E ++ +L + +V +G C
Sbjct: 31 GTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA- 89
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFL 600
+ L+ E A L ++ + I + G+++L
Sbjct: 90 ---ES----WMLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYL 133
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 2e-04
Identities = 44/281 (15%), Positives = 83/281 (29%), Gaps = 57/281 (20%)
Query: 492 SHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSL 550
+ G I + D VA+ K ++L+ + H N++
Sbjct: 36 AEGTIVYRGMFDNRDVAV---KRILPECFSFADREVQLLRESDEHPNVI----RYFCTEK 88
Query: 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIA--IVKGVQFLHT-GIV-- 605
D Y+ E L+ ++ + + G+ LH+ IV
Sbjct: 89 DR---QFQYIAIELCAAT-LQEYVEQKDFAHL--GLEPITLLQQTTSGLAHLHSLNIVHR 142
Query: 606 ---PGVFSNNLKITDVLLDENFHVKIN----SYNLPLLAEARGKGSAEVSSPAKKTS--- 655
P N+ I+ I+ L G+ S S T
Sbjct: 143 DLKPH----NILISMPNAHGKIKAMISDFGLCKKLA-----VGRHSFSRRSGVPGTEGWI 193
Query: 656 ---VLARTEQ---DDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARK 708
+L+ + D++ G + +I G ++ Q NI
Sbjct: 194 APEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKS------LQRQANILLGACSL 247
Query: 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTL 749
+ P + D + EL + ++ +P+ RPS + L
Sbjct: 248 DCLHPE---KHEDVIAR---ELIEKMIAMDPQKRPSAKHVL 282
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 2e-04
Identities = 27/108 (25%), Positives = 54/108 (50%), Gaps = 22/108 (20%)
Query: 527 IELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQR 586
I ++ KL H N+V L LDDP+ +Y++FE GP ++ ++
Sbjct: 87 IAILKKLDHPNVVK-----LVEVLDDPNEDHLYMVFELVNQ--------GPVMEVPTLKP 133
Query: 587 IAAAIA------IVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKI 628
++ A ++KG+++LH + ++K +++L+ E+ H+KI
Sbjct: 134 LSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKI 178
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 2e-04
Identities = 20/86 (23%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Query: 253 KMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNK 312
+ LVL N + G + L+ L + + + +L LP + L++ N+
Sbjct: 25 AVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLIS--VSNLPKLPKLKKLELSENR 82
Query: 313 LTGLLLQNMSCNPQLAFVDLSSNLLT 338
+ G L P L ++LS N L
Sbjct: 83 IFGGLDMLAEKLPNLTHLNLSGNKLK 108
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 2e-04
Identities = 38/216 (17%), Positives = 85/216 (39%), Gaps = 49/216 (22%)
Query: 492 SHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTY-HIELISKLRHSNLVSALGHCLDFSL 550
S G +++ KL + VAI+ + K+ + ++++ ++H N+V L +
Sbjct: 52 SFGVVFQAKLVESDEVAIKKVLQDKR-----FKNRELQIMRIVKHPNVVD-LKAFFYSNG 105
Query: 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVK--------GVQFLHT 602
D + L+ EY P ET+ + + + ++K + ++H+
Sbjct: 106 DKKDEVFLNLVLEYVP-ETVYRAS-----RHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS 159
Query: 603 GIVPGVFSNNLKITDVLLDENFHV-KINSYNLPLLAEARGKGSAEVSSPAKK-TS----- 655
G+ ++K ++LLD V K+ + GSA++ + S
Sbjct: 160 I---GICHRDIKPQNLLLDPPSGVLKLIDF-----------GSAKILIAGEPNVSYICSR 205
Query: 656 -------VLARTEQDDKSDVYDIGIILIEIIVGRPI 684
+ T D++ G ++ E++ G+P+
Sbjct: 206 YYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPL 241
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 4e-04
Identities = 35/149 (23%), Positives = 63/149 (42%), Gaps = 28/149 (18%)
Query: 492 SHGQIYKGKLTD-GTLVAIRSLKMSKKSSPHM-YTY-HIELISKLRHSNLVSALGHCLDF 548
S G +Y+ KL D G LVAI KK + ++++ KL H N+V L +
Sbjct: 66 SFGVVYQAKLCDSGELVAI------KKVLQDKRFKNRELQIMRKLDHCNIVR-LRYFFYS 118
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVK--------GVQFL 600
S + + L+ +Y P ET+ + + + VK + ++
Sbjct: 119 SGEKKDEVYLNLVLDYVP-ETVYRVA-----RHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 601 HTGIVPGVFSNNLKITDVLLDENFHV-KI 628
H+ G+ ++K ++LLD + V K+
Sbjct: 173 HSF---GICHRDIKPQNLLLDPDTAVLKL 198
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 4e-04
Identities = 41/210 (19%), Positives = 90/210 (42%), Gaps = 45/210 (21%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550
+ G +Y + G VAIR + + ++ + I ++ + ++ N+V+ L + +
Sbjct: 32 ASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD---SYLV 88
Query: 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIV-----KGVQFLHTGIV 605
D ++++ EY +L ++ + Q IA V + ++FLH+
Sbjct: 89 GDE----LWVVMEYLAGGSLTDVVTE--TCMDEGQ-----IAAVCRECLQALEFLHSN-- 135
Query: 606 PGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSP-AKKTS--------- 655
V ++K ++LL + VK+ + A+++ +K+++
Sbjct: 136 -QVIHRDIKSDNILLGMDGSVKLTDFGF----------CAQITPEQSKRSTMVGTPYWMA 184
Query: 656 --VLARTEQDDKSDVYDIGIILIEIIVGRP 683
V+ R K D++ +GI+ IE+I G P
Sbjct: 185 PEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 214
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 4e-04
Identities = 39/210 (18%), Positives = 86/210 (40%), Gaps = 45/210 (21%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550
S G + + G VA++ + + K+ + + ++ +H N+V + +
Sbjct: 57 STGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYK---SYLV 113
Query: 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIV-----KGVQFLHTGIV 605
+ ++++ E+ L +S +L Q IA V + + +LH
Sbjct: 114 GEE----LWVLMEFLQGGALTDIVSQ--VRLNEEQ-----IATVCEAVLQALAYLHA--- 159
Query: 606 PGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSP-AKKTS--------- 655
GV ++K +LL + VK++ + A++S K+ S
Sbjct: 160 QGVIHRDIKSDSILLTLDGRVKLSDFGF----------CAQISKDVPKRKSLVGTPYWMA 209
Query: 656 --VLARTEQDDKSDVYDIGIILIEIIVGRP 683
V++R+ + D++ +GI++IE++ G P
Sbjct: 210 PEVISRSLYATEVDIWSLGIMVIEMVDGEP 239
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 5e-04
Identities = 38/206 (18%), Positives = 86/206 (41%), Gaps = 37/206 (17%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550
S+G +YK G +VAI+ ++ +S I ++ + ++V G +
Sbjct: 41 SYGSVYKAIHKETGQIVAIK--QVPVESDLQEIIKEISIMQQCDSPHVVKYYGS---YFK 95
Query: 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIA-IVKGVQFLHTGIVPGVF 609
+ ++++ EY ++ I LT + IA + +KG+++LH
Sbjct: 96 NTD----LWIVMEYCGAGSVSDIIRLRNKTLTEDE-IATILQSTLKGLEYLHFM---RKI 147
Query: 610 SNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSP-AKKTS-----------VL 657
++K ++LL+ H K+ + + + +++ AK+ + V+
Sbjct: 148 HRDIKAGNILLNTEGHAKLADFGV----------AGQLTDTMAKRNTVIGTPFWMAPEVI 197
Query: 658 ARTEQDDKSDVYDIGIILIEIIVGRP 683
+ +D++ +GI IE+ G+P
Sbjct: 198 QEIGYNCVADIWSLGITAIEMAEGKP 223
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 5e-04
Identities = 55/256 (21%), Positives = 108/256 (42%), Gaps = 46/256 (17%)
Query: 504 GTLVAIRSL---KMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYL 560
G VAI+ + +++ S ++ + ++ L H N+V L ++ + +YL
Sbjct: 40 GREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVK-LFEVIE------TEKTLYL 91
Query: 561 IFEYAPNETLRSFISGPGYKLTWVQRIAAAIA--IVKGVQFLHTGIVPGVFSNNLKITDV 618
I EYA + ++ G ++ ++ A + IV VQ+ H + +LK ++
Sbjct: 92 IMEYASGGEVFDYLVAHG-RMK--EKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENL 145
Query: 619 LLDENFHVKINSYNLPLLAEARGK-----GSAEVSSPAKKTSVLARTEQD-DKSDVYDIG 672
LLD + ++KI + GK G+ ++P + + D + DV+ +G
Sbjct: 146 LLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPE----LFQGKKYDGPEVDVWSLG 201
Query: 673 IILIEIIVGR-PITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELC 731
+IL ++ G P +N+ L + +L + I P M+ + LKR + L
Sbjct: 202 VILYTLVSGSLPFDGQNLKELRERVL-------RGKYRI--PFYMSTDCENLLKRFLVL- 251
Query: 732 LRCLSNEPKDRPSVED 747
P R ++E
Sbjct: 252 ------NPIKRGTLEQ 261
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 5e-04
Identities = 49/183 (26%), Positives = 64/183 (34%), Gaps = 41/183 (22%)
Query: 139 EILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSG 198
E L+L S L+ L L L LD N+ L L L L NN L+
Sbjct: 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA- 96
Query: 199 FLPV----SLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKM 254
LP+ LT L L L N L +P VFD RL K+
Sbjct: 97 SLPLGVFDHLTQLDKL---YLGGNQLK-SLPS-------GVFD-----------RL-TKL 133
Query: 255 VTLVLRNNRFQ------FGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDI 308
L L N+ Q F D+L LQ L +S N+ + L + + +
Sbjct: 134 KELRLNTNQLQSIPAGAF----DKLT---NLQTLSLSTNQLQSVPHGAFDRLGKLQTITL 186
Query: 309 HGN 311
GN
Sbjct: 187 FGN 189
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 6e-04
Identities = 39/134 (29%), Positives = 56/134 (41%), Gaps = 17/134 (12%)
Query: 139 EILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSEL-SLLQVLSVLSLKNNSLS 197
+IL L N ++ P SL NL+ L L N+ A+P + L L+VL L N L+
Sbjct: 43 QILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG-ALPVGVFDSLTQLTVLDLGTNQLT 101
Query: 198 GFLPV----SLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFG--PR--FP 248
LP L L+ L + N L+ E+P + L +L + N P F
Sbjct: 102 V-LPSAVFDRLVHLKEL---FMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFD 156
Query: 249 RLHKKMVTLVLRNN 262
RL + L N
Sbjct: 157 RL-SSLTHAYLFGN 169
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 41.5 bits (97), Expect = 9e-04
Identities = 36/309 (11%), Positives = 91/309 (29%), Gaps = 73/309 (23%)
Query: 492 SHGQIYKGKLTD------GTLVAIRSLKMSKKSSP---HMYTYHIELISKLRHSNLVSAL 542
+ Q+Y+ D + K+ K ++P ++ T +E + +
Sbjct: 77 AFAQVYEATQGDLNDAKNKQKFVL---KVQKPANPWEFYIGTQLMERLKPSMQHMFMKFY 133
Query: 543 GHCLDFSLDDPSISIIYLIFEYAPNETLRSFI----SGPGYKLTWVQRIAAAIAIVKGVQ 598
+ L+ E TL + I + P + I+ A+ ++ ++
Sbjct: 134 SA---HLFQNG----SVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIE 186
Query: 599 FLHT-GIVPG-------VFSNNLKITDVLLDENFHVKI----NSYNLPLLAEAR----GK 642
+H I+ G + N D D + + + S ++ L +
Sbjct: 187 QVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKC 246
Query: 643 GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRP--ITSENVVVLVKDLLQVN 700
++ +L+ + + D + + + ++ G + +E + L
Sbjct: 247 ETSGFQCVE----MLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGLF--- 299
Query: 701 IGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTL-------WNLQ 753
+ + + NE L+ D L +
Sbjct: 300 -------RRLPHLDMWNEFFH-----------VMLNIPDCHHLPSLDLLRQKLKKVFQQH 341
Query: 754 FATQIQGLK 762
+ +I+ L+
Sbjct: 342 YTNKIRALR 350
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 769 | |||
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 100.0 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 100.0 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 100.0 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 100.0 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 100.0 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 100.0 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 99.98 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 99.97 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 99.97 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 99.97 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 99.97 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 99.97 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 99.97 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 99.97 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 99.97 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 99.97 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 99.97 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 99.97 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 99.97 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 99.97 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 99.97 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.96 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 99.96 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 99.96 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 99.96 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 99.96 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 99.96 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 99.96 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 99.96 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.96 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 99.96 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 99.96 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 99.96 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.96 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.96 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 99.96 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 99.96 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.96 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.95 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.95 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.95 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 99.95 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.95 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.95 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.95 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.95 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 99.95 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.95 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 99.95 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 99.95 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 99.95 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 99.95 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.94 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 99.94 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 99.94 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 99.94 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.94 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.94 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 99.94 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.93 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.93 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.93 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.93 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.93 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.93 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.92 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.92 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.92 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.91 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.91 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.91 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.9 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.9 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.9 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.89 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.89 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.89 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.89 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.89 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.88 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.88 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.88 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.88 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.87 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.87 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.87 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 99.87 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.86 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.86 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.86 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.86 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.86 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.86 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 99.85 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.85 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.85 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.83 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.82 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.81 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.81 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.8 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.8 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.8 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.79 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.79 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.79 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.79 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.79 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.79 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.78 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.78 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.78 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.77 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.76 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.75 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.75 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.74 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.72 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.72 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.71 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.7 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 99.7 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.68 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.66 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 99.65 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.65 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.64 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.64 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.64 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.63 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.61 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 99.59 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.58 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.56 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.54 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.53 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.53 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.51 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 99.51 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 99.51 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.49 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.47 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 99.44 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 99.4 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.36 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 99.32 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.3 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.27 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 99.22 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 99.19 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.18 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 98.97 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 98.83 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 98.83 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 98.8 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 98.78 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.78 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 98.75 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 98.64 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.57 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.55 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.45 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.45 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 98.28 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.28 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.23 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 98.22 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 98.2 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 98.19 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 98.12 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 97.94 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 97.88 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 97.84 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 97.72 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 97.62 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 97.46 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 97.43 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 97.35 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 97.23 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 97.22 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 97.08 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 96.93 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 96.83 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 96.81 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 96.8 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 96.67 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 96.58 | |
| 3c5i_A | 369 | Choline kinase; choline, kinase, malaria, transfer | 96.53 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 96.51 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 96.11 | |
| 3i1a_A | 339 | Spectinomycin phosphotransferase; protein kinase, | 95.67 | |
| 3f2s_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 95.32 | |
| 3mes_A | 424 | Choline kinase; malaria, structural genomics, stru | 95.1 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 94.94 | |
| 3g15_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 90.63 | |
| 2ks1_B | 44 | Epidermal growth factor receptor; ERBB1, ERBB2, tr | 84.08 |
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-52 Score=438.96 Aligned_cols=254 Identities=21% Similarity=0.319 Sum_probs=205.2
Q ss_pred cCCCCcCccccCCceeEEEEEeC------CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT------DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
++|...+.||+|+||+||+|++. ++..||||+++.......++|.+|+++|++++|||||+++|+|.+.+.
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~--- 89 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP--- 89 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS---
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCE---
Confidence 35667789999999999999863 478899999986544445789999999999999999999999987443
Q ss_pred CcceEEEEEeccCCCchhhhhcCC------------CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGP------------GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD 621 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld 621 (769)
.++|||||++|+|.++++.. ...++|.++.+|+.|||+||+|||++ +||||||||+|||++
T Consensus 90 ----~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~ 162 (299)
T 4asz_A 90 ----LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVG 162 (299)
T ss_dssp ----EEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC
T ss_pred ----EEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEEC
Confidence 89999999999999999632 24699999999999999999999998 999999999999999
Q ss_pred CCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhh
Q 004195 622 ENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDL 696 (769)
Q Consensus 622 ~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~ 696 (769)
+++.+||+|||+|+....... ....++..|++||.+.+..|+.|+|||||||++|||+| |++||.+.....+...
T Consensus 163 ~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~ 242 (299)
T 4asz_A 163 ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIEC 242 (299)
T ss_dssp GGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH
T ss_pred CCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 999999999999986544322 22345567899999999999999999999999999999 8999987544333222
Q ss_pred hhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 697 LQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 697 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
+.... .+.....+++ ++.+++.+||+.||++||||+||++.++...+
T Consensus 243 i~~~~----------~~~~p~~~~~----~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~ 289 (299)
T 4asz_A 243 ITQGR----------VLQRPRTCPQ----EVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289 (299)
T ss_dssp HHHTC----------CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHcCC----------CCCCCccchH----HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 22110 0112233444 48899999999999999999999888775543
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-52 Score=442.97 Aligned_cols=256 Identities=20% Similarity=0.309 Sum_probs=202.7
Q ss_pred cCCCCcCccccCCceeEEEEEeC------CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT------DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
++|...+.||+|+||+||+|+++ +++.||||+++.......++|.+|+++|++++|||||+++|+|.+...
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~--- 117 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRP--- 117 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS---
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE---
Confidence 34566788999999999999864 478999999986544445789999999999999999999999986443
Q ss_pred CcceEEEEEeccCCCchhhhhcCCC--------------CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCcccccee
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPG--------------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVL 619 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~--------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NIL 619 (769)
.+||||||++|+|.++++... .+++|.++++|+.|||+||+|||+. +||||||||+|||
T Consensus 118 ----~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NIL 190 (329)
T 4aoj_A 118 ----LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCL 190 (329)
T ss_dssp ----EEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred ----EEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEE
Confidence 899999999999999997432 3699999999999999999999998 9999999999999
Q ss_pred eCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHH
Q 004195 620 LDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVK 694 (769)
Q Consensus 620 ld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~ 694 (769)
+++++.+||+|||+|+....... ....++..|++||.+.+..|+.++|||||||++|||+| |+.||.+.....+.
T Consensus 191 l~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~ 270 (329)
T 4aoj_A 191 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI 270 (329)
T ss_dssp EETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHH
T ss_pred ECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 99999999999999976543321 22334556899999999999999999999999999999 89999765443332
Q ss_pred hhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 695 DLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 695 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
..+... ..+.....+++ ++.+|+.+||+.||++||||+||+++|+...+.+
T Consensus 271 ~~i~~g----------~~~~~p~~~~~----~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p 321 (329)
T 4aoj_A 271 DCITQG----------RELERPRACPP----EVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP 321 (329)
T ss_dssp HHHHHT----------CCCCCCTTCCH----HHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred HHHHcC----------CCCCCcccccH----HHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence 222111 01222233444 4889999999999999999999999998776544
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-52 Score=444.03 Aligned_cols=255 Identities=17% Similarity=0.296 Sum_probs=212.9
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
+.|+..+.||+|+||+||+|+.. +|+.||||+++.......+.+.+|+++|++++|||||+++++|.+.+ .+
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~-------~~ 146 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD-------EL 146 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETT-------EE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC-------EE
Confidence 45888899999999999999976 79999999998776666778999999999999999999999998744 48
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
|||||||++|+|.+++.+. .+++.++..|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+...
T Consensus 147 ~ivmEy~~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~ 221 (346)
T 4fih_A 147 WVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 221 (346)
T ss_dssp EEEECCCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecC
Confidence 9999999999999999754 589999999999999999999999 99999999999999999999999999997654
Q ss_pred ccC--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCcccc
Q 004195 639 ARG--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM 716 (769)
Q Consensus 639 ~~~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 716 (769)
... ..+.+++..|++||.+.+..|+.++||||+||++|||+||++||.+.........+...... .....
T Consensus 222 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~--------~~~~~ 293 (346)
T 4fih_A 222 KEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP--------RLKNL 293 (346)
T ss_dssp SSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCC--------CCSCG
T ss_pred CCCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCC--------CCCcc
Confidence 332 23445677889999998889999999999999999999999999765443332222211110 00111
Q ss_pred CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 717 NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 717 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
..++ .++.+|+.+||+.||++|||++|+++|+||.+..
T Consensus 294 ~~~s----~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~ 331 (346)
T 4fih_A 294 HKVS----PSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG 331 (346)
T ss_dssp GGSC----HHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred ccCC----HHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCCC
Confidence 1233 3489999999999999999999999999998643
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-52 Score=435.69 Aligned_cols=249 Identities=20% Similarity=0.288 Sum_probs=202.0
Q ss_pred CCCcCccccCCceeEEEEEeC------CCcEEEEEEccccC-CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 482 FDSSSFMCDASHGQIYKGKLT------DGTLVAIRSLKMSK-KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
+...+.||+|+||+||+|++. +++.||||+++... ....++|.+|+.++++++|||||+++|+|.+.+.
T Consensus 28 ~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~---- 103 (308)
T 4gt4_A 28 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQP---- 103 (308)
T ss_dssp EEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS----
T ss_pred CeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCE----
Confidence 344678999999999999863 46789999997543 2345789999999999999999999999986443
Q ss_pred cceEEEEEeccCCCchhhhhcCC---------------CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCcccccee
Q 004195 555 ISIIYLIFEYAPNETLRSFISGP---------------GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVL 619 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NIL 619 (769)
.++|||||++|||.++|... ...++|.++.+|+.|||+||+|||+. +||||||||+|||
T Consensus 104 ---~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NIL 177 (308)
T 4gt4_A 104 ---LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVL 177 (308)
T ss_dssp ---CEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred ---EEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceE
Confidence 79999999999999999632 13589999999999999999999998 9999999999999
Q ss_pred eCCCceeeecCCCCchhhhccC----CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHH
Q 004195 620 LDENFHVKINSYNLPLLAEARG----KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVK 694 (769)
Q Consensus 620 ld~~~~~kl~DFGla~~~~~~~----~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~ 694 (769)
+++++++||+|||+|+...... .....++..|++||.+....|+.++|||||||++|||+| |++||.+.....+.
T Consensus 178 l~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~ 257 (308)
T 4gt4_A 178 VYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVV 257 (308)
T ss_dssp ECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHH
T ss_pred ECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 9999999999999997654332 223345567899999999999999999999999999999 89999875544333
Q ss_pred hhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 695 DLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 695 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
..+.... .+.....+++ .+.+++.+||+.||++||||+||+++|+.
T Consensus 258 ~~i~~~~----------~~~~p~~~~~----~~~~li~~C~~~dP~~RPs~~ei~~~L~a 303 (308)
T 4gt4_A 258 EMIRNRQ----------VLPCPDDCPA----WVYALMIECWNEFPSRRPRFKDIHSRLRA 303 (308)
T ss_dssp HHHHTTC----------CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred HHHHcCC----------CCCCcccchH----HHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 3222110 0112233444 48899999999999999999999999874
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-52 Score=432.04 Aligned_cols=256 Identities=20% Similarity=0.239 Sum_probs=202.3
Q ss_pred CCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 483 DSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 483 ~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
...+.||+|+||+||+|+.. ++..||||++...... ..+.|.+|++++++++|||||+++++|.+... ....+|
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~---~~~~~~ 105 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVK---GKKCIV 105 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEET---TEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccC---CCcEEE
Confidence 34567999999999999976 6899999999755322 23578999999999999999999999875322 134589
Q ss_pred EEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeC-CCceeeecCCCCchhhh
Q 004195 560 LIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD-ENFHVKINSYNLPLLAE 638 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld-~~~~~kl~DFGla~~~~ 638 (769)
+|||||++|+|.+++.+.+ .+++..+..|+.||++||+|||++ .++||||||||+|||++ +++.+||+|||+|+...
T Consensus 106 lvmEy~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 106 LVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred EEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 9999999999999998544 699999999999999999999997 22399999999999997 47999999999998765
Q ss_pred ccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCch-hHHHHhhhhhccccccccccccCccccC
Q 004195 639 ARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENV-VVLVKDLLQVNIGTDEARKSIVDPAVMN 717 (769)
Q Consensus 639 ~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 717 (769)
.....+..++..|++||.+. ..|+.++|||||||++|||+||++||.+.. ...+...+.... ..+....
T Consensus 184 ~~~~~~~~GTp~YmAPE~~~-~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~---------~~~~~~~ 253 (290)
T 3fpq_A 184 ASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGV---------KPASFDK 253 (290)
T ss_dssp TTSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTC---------CCGGGGG
T ss_pred CCccCCcccCccccCHHHcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCC---------CCCCCCc
Confidence 44444556677889999875 579999999999999999999999996532 222222111110 0111122
Q ss_pred CCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 718 ECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 718 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
..++ ++.+++.+||+.||++|||++|+++|+||.++
T Consensus 254 ~~~~----~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~~ 289 (290)
T 3fpq_A 254 VAIP----EVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE 289 (290)
T ss_dssp CCCH----HHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred cCCH----HHHHHHHHHccCChhHCcCHHHHhcCccccCC
Confidence 2333 38899999999999999999999999999754
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-51 Score=431.71 Aligned_cols=255 Identities=20% Similarity=0.301 Sum_probs=200.1
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|...+.||+|+||+||+|++++ .||||+++...... .+.|.+|++++++++|||||+++|+|.++ .
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~--------~ 105 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD--------N 105 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS--------S
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECC--------e
Confidence 356677899999999999999753 59999997543322 35799999999999999999999998642 2
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.+||||||++|+|.++++.....++|.++.+|+.|||+||+|||+. +||||||||+|||+++++++||+|||+|+..
T Consensus 106 ~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 182 (307)
T 3omv_A 106 LAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVK 182 (307)
T ss_dssp CEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC-
T ss_pred EEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceec
Confidence 6999999999999999986666799999999999999999999998 9999999999999999999999999999765
Q ss_pred hccC----CcceeecCCCcchhhhcc---CCCCCCCCeeehhHHHHHHHhCCCCCCCchh-HHHHhhhhhcccccccccc
Q 004195 638 EARG----KGSAEVSSPAKKTSVLAR---TEQDDKSDVYDIGIILIEIIVGRPITSENVV-VLVKDLLQVNIGTDEARKS 709 (769)
Q Consensus 638 ~~~~----~~~~~~~~~~~~pe~~~~---~~~~~ksDVwS~Gvil~elltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~ 709 (769)
.... .....++..|++||.+.+ ..|+.|+|||||||++|||+||++||.+... ..+...+......+ .
T Consensus 183 ~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p-~--- 258 (307)
T 3omv_A 183 SRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASP-D--- 258 (307)
T ss_dssp -----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCC-C---
T ss_pred ccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCC-C---
Confidence 4321 223456678899998853 3589999999999999999999999975432 22222222111100 0
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 710 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
-+.....++ ..+.+++.+||+.||++||||.||+++++....
T Consensus 259 --~~~~~~~~~----~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~ 300 (307)
T 3omv_A 259 --LSKLYKNCP----KAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp --STTSCTTSC----HHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHT
T ss_pred --cccccccch----HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 011222334 448899999999999999999999999987643
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-52 Score=442.21 Aligned_cols=255 Identities=17% Similarity=0.264 Sum_probs=205.8
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
++|+..+.||+|+||+||+|+.. +|+.||||+++...... .+.+.+|++++++++|||||++++++.+.+
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~------- 96 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENG------- 96 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-------
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECC-------
Confidence 57999999999999999999975 79999999997654322 357899999999999999999999998743
Q ss_pred eEEEEEeccCCCchhhhhc-CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 557 IIYLIFEYAPNETLRSFIS-GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
.+|||||||++|+|.+++. +.+..+++.++..|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+
T Consensus 97 ~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~ 173 (350)
T 4b9d_A 97 SLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIAR 173 (350)
T ss_dssp EEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEES
T ss_pred EEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccce
Confidence 4899999999999999997 3344689999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccC--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHH-HhhhhhccccccccccccC
Q 004195 636 LAEARG--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLV-KDLLQVNIGTDEARKSIVD 712 (769)
Q Consensus 636 ~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~d 712 (769)
...... .....++..|++||.+.+..|+.++||||+||++|||+||++||........ ..+.....
T Consensus 174 ~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~----------- 242 (350)
T 4b9d_A 174 VLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSF----------- 242 (350)
T ss_dssp CCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC-----------
T ss_pred eecCCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-----------
Confidence 654322 2234567788999999999999999999999999999999999986543322 22222110
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 713 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
+.....+++ ++.+|+.+||+.||++|||++|+++|+|+.+..+
T Consensus 243 ~~~~~~~s~----~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~~~ 285 (350)
T 4b9d_A 243 PPVSLHYSY----DLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRIE 285 (350)
T ss_dssp CCCCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTTGG
T ss_pred CCCCccCCH----HHHHHHHHHccCChhHCcCHHHHhcCHHhhcCCC
Confidence 112223344 4899999999999999999999999999976543
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-51 Score=444.51 Aligned_cols=254 Identities=17% Similarity=0.306 Sum_probs=213.7
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
+.|+..+.||+|+||.||+|+.. +|+.||||++........+.+.+|+++|++++|||||+++++|.+.+ .+
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~-------~~ 223 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD-------EL 223 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETT-------EE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECC-------EE
Confidence 56888999999999999999976 79999999998776666778999999999999999999999998744 48
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
|||||||++|+|.++++.. .+++.++..|+.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+...
T Consensus 224 ~iVmEy~~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~ 298 (423)
T 4fie_A 224 WVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 298 (423)
T ss_dssp EEEEECCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECC
T ss_pred EEEEeCCCCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECC
Confidence 9999999999999999754 589999999999999999999999 99999999999999999999999999997654
Q ss_pred cc--CCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCcccc
Q 004195 639 AR--GKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM 716 (769)
Q Consensus 639 ~~--~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 716 (769)
.. .....+++..|++||.+.+..|+.++|||||||++|||++|++||.+.........+...... .....
T Consensus 299 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~--------~~~~~ 370 (423)
T 4fie_A 299 KEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP--------RLKNL 370 (423)
T ss_dssp SSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC--------CCSCT
T ss_pred CCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCC--------CCccc
Confidence 33 234456778899999999999999999999999999999999999765443332222211110 01111
Q ss_pred CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 717 NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 717 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
..+++ ++.+|+.+||+.||++|||++|+++|+||.+.
T Consensus 371 ~~~s~----~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~ 407 (423)
T 4fie_A 371 HKVSP----SLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 407 (423)
T ss_dssp TSSCH----HHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred ccCCH----HHHHHHHHHcCCChhHCcCHHHHhcCHHhcCC
Confidence 23334 48899999999999999999999999999864
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-51 Score=418.68 Aligned_cols=253 Identities=18% Similarity=0.235 Sum_probs=197.4
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|+..+.||+|+||+||+|+.. +|+.||||+++... ....+.+.+|++++++++|||||++++++.+.+
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~------ 86 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD------ 86 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS------
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC------
Confidence 57999999999999999999975 79999999997543 233467999999999999999999999998643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..|+||||| +|+|.+++.+.+ .+++.++..++.||+.||+|||++ +|+||||||+|||+++++++||+|||+|+
T Consensus 87 -~~~ivmEy~-~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~ 160 (275)
T 3hyh_A 87 -EIIMVIEYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSN 160 (275)
T ss_dssp -EEEEEEECC-CEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC-
T ss_pred -EEEEEEeCC-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCe
Confidence 489999999 689999997554 699999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccC-CcceeecCCCcchhhhccCCC-CCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCc
Q 004195 636 LAEARG-KGSAEVSSPAKKTSVLARTEQ-DDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 636 ~~~~~~-~~~~~~~~~~~~pe~~~~~~~-~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
...... ..+..++..|++||.+.+..| +.++||||+||++|||+||++||.+.........+... .+
T Consensus 161 ~~~~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~-----------~~ 229 (275)
T 3hyh_A 161 IMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG-----------VY 229 (275)
T ss_dssp --------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT-----------CC
T ss_pred ecCCCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC-----------CC
Confidence 664433 234566778899999987776 57999999999999999999999875543322222111 01
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
.+....++ ++.+++.+||+.||++|||++|+++|+||....+
T Consensus 230 ~~p~~~s~----~~~~li~~~L~~dP~~R~s~~eil~hpw~k~~~p 271 (275)
T 3hyh_A 230 TLPKFLSP----GAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLP 271 (275)
T ss_dssp CCCTTSCH----HHHHHHHHHSCSSGGGSCCHHHHHHCHHHHTTCC
T ss_pred CCCCCCCH----HHHHHHHHHccCChhHCcCHHHHHcCcccccCCC
Confidence 11122333 4889999999999999999999999999976543
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-51 Score=427.02 Aligned_cols=250 Identities=18% Similarity=0.267 Sum_probs=209.2
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc---CCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS---KKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|+..+.||+|+||+||+|+.. +|+.||||++.+. .....+.+.+|+++|++++|||||++++++.+.+
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~------ 105 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE------ 105 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS------
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC------
Confidence 56999999999999999999975 7999999999753 2344577999999999999999999999998744
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
.+|+|||||++|+|.+++.+.+ .+++.+...|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+
T Consensus 106 -~~yivmEy~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~ 180 (311)
T 4aw0_A 106 -KLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAK 180 (311)
T ss_dssp -EEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred -EEEEEEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCce
Confidence 4899999999999999998554 699999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccC----CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHH-Hhhhhhccccccccccc
Q 004195 636 LAEARG----KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLV-KDLLQVNIGTDEARKSI 710 (769)
Q Consensus 636 ~~~~~~----~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~ 710 (769)
...... ..+.+++..|++||.+.+..|+.++||||+||++|||+||++||.......+ ..+....
T Consensus 181 ~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~---------- 250 (311)
T 4aw0_A 181 VLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLE---------- 250 (311)
T ss_dssp ECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC----------
T ss_pred ecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC----------
Confidence 654322 2334567788999999999999999999999999999999999976543332 2222211
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHH------HHHHhHhhh
Q 004195 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVED------TLWNLQFAT 756 (769)
Q Consensus 711 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e------vl~~l~~~~ 756 (769)
+.+....++ ++.+|+.+||+.||++|||++| |++|+||..
T Consensus 251 --~~~p~~~s~----~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~ 296 (311)
T 4aw0_A 251 --YDFPEKFFP----KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFES 296 (311)
T ss_dssp --CCCCTTCCH----HHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTT
T ss_pred --CCCCcccCH----HHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCC
Confidence 111223343 4889999999999999999987 588999865
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-50 Score=426.23 Aligned_cols=249 Identities=14% Similarity=0.167 Sum_probs=200.3
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
+.|...+.||+|+||+||+|+.. +|+.||||+++.... ..+|+.++++++|||||++++++.+.+ .+
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~-------~~ 125 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGP-------WV 125 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETT-------EE
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECC-------EE
Confidence 45777889999999999999976 799999999975422 347999999999999999999998643 48
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc-eeeecCCCCchhh
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF-HVKINSYNLPLLA 637 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~-~~kl~DFGla~~~ 637 (769)
|||||||++|+|.+++++.+ .+++.++..|+.||+.||+|||++ +||||||||+|||++.++ ++||+|||+|+..
T Consensus 126 ~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~ 201 (336)
T 4g3f_A 126 NIFMELLEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCL 201 (336)
T ss_dssp EEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC
T ss_pred EEEEeccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEc
Confidence 99999999999999998554 699999999999999999999999 999999999999999988 5999999999765
Q ss_pred hccCC-------cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccc
Q 004195 638 EARGK-------GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSI 710 (769)
Q Consensus 638 ~~~~~-------~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (769)
..... ....++..|++||.+.+..|+.++|||||||++|||+||++||.+.....+...+... ....
T Consensus 202 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~---~~~~--- 275 (336)
T 4g3f_A 202 QPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASE---PPPI--- 275 (336)
T ss_dssp ------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHS---CCGG---
T ss_pred cCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcC---CCCc---
Confidence 43221 1234667789999999999999999999999999999999999764322211111110 0000
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 711 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
+.+...+++ .+.+++.+||+.||++|||+.|++++++.+.
T Consensus 276 --~~~~~~~s~----~~~~li~~~L~~dP~~R~sa~el~~~l~~~l 315 (336)
T 4g3f_A 276 --REIPPSCAP----LTAQAIQEGLRKEPVHRASAMELRRKVGKAL 315 (336)
T ss_dssp --GGSCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --hhcCccCCH----HHHHHHHHHccCCHhHCcCHHHHHHHHHHHH
Confidence 112223343 4889999999999999999999999987654
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-50 Score=423.29 Aligned_cols=251 Identities=17% Similarity=0.192 Sum_probs=200.3
Q ss_pred cCCCCcCccccCCceeEEEEEeC----CCcEEEEEEccccCC--CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT----DGTLVAIRSLKMSKK--SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~----~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
++|+..+.||+|+||+||+|+.. +++.||||+++.... .....+.+|++++++++|||||++++++.+.+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~---- 99 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEG---- 99 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETT----
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC----
Confidence 46889999999999999999852 478999999975421 22346889999999999999999999998743
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
.+|+|||||++|+|.+++.+.+ .+++.++..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+
T Consensus 100 ---~~~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGl 172 (304)
T 3ubd_A 100 ---KLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGL 172 (304)
T ss_dssp ---EEEEEECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEE
T ss_pred ---EEEEEEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEeccccc
Confidence 4899999999999999998654 699999999999999999999999 999999999999999999999999999
Q ss_pred chhhhcc--CCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccccccc
Q 004195 634 PLLAEAR--GKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIV 711 (769)
Q Consensus 634 a~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (769)
|+..... ...+..++..|++||.+.+..|+.++||||+||++|||+||++||.+.........+...
T Consensus 173 a~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~----------- 241 (304)
T 3ubd_A 173 SKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA----------- 241 (304)
T ss_dssp EEC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-----------
T ss_pred ceeccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcC-----------
Confidence 9754332 223445677889999999999999999999999999999999999865543322222110
Q ss_pred CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCC-----HHHHHHHhHhhh
Q 004195 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRPS-----VEDTLWNLQFAT 756 (769)
Q Consensus 712 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~l~~~~ 756 (769)
.+.+....++ ++.+++.+||+.||++||| ++|+++|+||..
T Consensus 242 ~~~~p~~~s~----~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~ 287 (304)
T 3ubd_A 242 KLGMPQFLSP----EAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFST 287 (304)
T ss_dssp CCCCCTTSCH----HHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTT
T ss_pred CCCCCCcCCH----HHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccC
Confidence 0111123333 4889999999999999998 589999999975
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-50 Score=423.85 Aligned_cols=275 Identities=19% Similarity=0.265 Sum_probs=199.2
Q ss_pred CCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEE
Q 004195 481 CFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYL 560 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~l 560 (769)
+|...+.||+|+||+||+|++ +|+.||||+++.... ....+++|+..+.+++|||||+++|+|.+.+. ....++|
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~---~~~~~~l 78 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNG---TWTQLWL 78 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECS---SSEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCC---CceEEEE
Confidence 456678999999999999998 589999999974321 11223456666678899999999999986432 2235899
Q ss_pred EEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCC-----CCCccccCccccceeeCCCceeeecCCCCch
Q 004195 561 IFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGI-----VPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 561 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
|||||++|+|.+++++. .++|..+.+++.|+++||+|||+++ .++||||||||+|||+|.++++||+|||+|+
T Consensus 79 V~Ey~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~ 156 (303)
T 3hmm_A 79 VSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp EEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred EecCCCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCc
Confidence 99999999999999854 5899999999999999999999863 5689999999999999999999999999997
Q ss_pred hhhccCC------cceeecCCCcchhhhccC------CCCCCCCeeehhHHHHHHHhCCCCCCCchhHHH--Hhhhhhcc
Q 004195 636 LAEARGK------GSAEVSSPAKKTSVLART------EQDDKSDVYDIGIILIEIIVGRPITSENVVVLV--KDLLQVNI 701 (769)
Q Consensus 636 ~~~~~~~------~~~~~~~~~~~pe~~~~~------~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~--~~~~~~~~ 701 (769)
....... ....++..|++||.+.+. .++.|+|||||||++|||+||++|+........ ........
T Consensus 157 ~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~ 236 (303)
T 3hmm_A 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236 (303)
T ss_dssp EEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred cccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccc
Confidence 6543221 123456678999988653 367899999999999999999887643211000 00000000
Q ss_pred cccc----ccccccCccccCCC-CHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcccc
Q 004195 702 GTDE----ARKSIVDPAVMNEC-SDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQGLK 762 (769)
Q Consensus 702 ~~~~----~~~~~~d~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~~~ 762 (769)
.... ......+|.+.... +.+....+.+++.+||+.||++||||.||++.|....+.++.+
T Consensus 237 ~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~~ik 302 (303)
T 3hmm_A 237 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGIK 302 (303)
T ss_dssp CHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC----
T ss_pred hHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHcCCC
Confidence 0000 00111233332221 2345677899999999999999999999999998876655543
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-49 Score=420.51 Aligned_cols=257 Identities=20% Similarity=0.258 Sum_probs=204.7
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC------CCcEEEEEEccccCCC-ChhHHHHHHHHHhhccC-CceeeEeeeeeccC
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT------DGTLVAIRSLKMSKKS-SPHMYTYHIELISKLRH-SNLVSALGHCLDFS 549 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H-~nIv~l~~~~~~~~ 549 (769)
..++|+..+.||+|+||+||+|++. .++.||||+++..... ..++|.+|+++|.+++| ||||+++|+|.+.+
T Consensus 62 ~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~ 141 (353)
T 4ase_A 62 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 141 (353)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred cHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecC
Confidence 3467888999999999999999854 2468999999754322 23579999999999965 99999999997532
Q ss_pred CCCCCcceEEEEEeccCCCchhhhhcCC---------------CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCcc
Q 004195 550 LDDPSISIIYLIFEYAPNETLRSFISGP---------------GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLK 614 (769)
Q Consensus 550 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlK 614 (769)
. .+++|||||++|+|.++|+.. ...++|.++..|+.|||+||+|||++ +|||||||
T Consensus 142 ~------~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK 212 (353)
T 4ase_A 142 G------PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLA 212 (353)
T ss_dssp S------CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred C------EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccC
Confidence 2 279999999999999999632 23589999999999999999999999 99999999
Q ss_pred ccceeeCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCch
Q 004195 615 ITDVLLDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENV 689 (769)
Q Consensus 615 p~NILld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~ 689 (769)
|+|||+++++.+||+|||+|+....... ....++..|++||.+.+..|+.++|||||||++|||+| |++||.+..
T Consensus 213 ~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~ 292 (353)
T 4ase_A 213 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 292 (353)
T ss_dssp GGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred ccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCC
Confidence 9999999999999999999986543322 23345567899999999999999999999999999998 899997643
Q ss_pred -hHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 690 -VVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 690 -~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
...+...+... ..+.....+++ ++.+++.+||+.||++|||+.||++||...-+
T Consensus 293 ~~~~~~~~i~~g----------~~~~~p~~~~~----~~~~li~~c~~~dP~~RPt~~eil~~L~~llq 347 (353)
T 4ase_A 293 IDEEFCRRLKEG----------TRMRAPDYTTP----EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 347 (353)
T ss_dssp CSHHHHHHHHHT----------CCCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcC----------CCCCCCccCCH----HHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence 22222222211 11222233444 48899999999999999999999999976543
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-48 Score=407.90 Aligned_cols=258 Identities=17% Similarity=0.309 Sum_probs=193.6
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC-ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCC-----
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS-SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD----- 552 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~----- 552 (769)
++|+..+.||+|+||+||+|+.. +|+.||||+++..... ..+.+.+|+++|++++|||||++++++.+.+...
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 46888999999999999999976 7999999999754322 2357899999999999999999999987644211
Q ss_pred CCcceEEEEEeccCCCchhhhhcCCC--CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecC
Q 004195 553 PSISIIYLIFEYAPNETLRSFISGPG--YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINS 630 (769)
Q Consensus 553 ~~~~~~~lV~Ey~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~D 630 (769)
......|+|||||++|+|.+++.... ...++..++.|+.||++||+|||++ +||||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEcc
Confidence 12335799999999999999998543 2356777899999999999999999 999999999999999999999999
Q ss_pred CCCchhhhccCC--------------cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhh
Q 004195 631 YNLPLLAEARGK--------------GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDL 696 (769)
Q Consensus 631 FGla~~~~~~~~--------------~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~ 696 (769)
||+|+....... ....++..|++||.+.+..|+.++|||||||++|||++ ||..... ....+
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~-~~~~~ 237 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME-RVRTL 237 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH-HHHHH
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH-HHHHH
Confidence 999976543221 12346778899999999999999999999999999997 6654321 11111
Q ss_pred hhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 697 LQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 697 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.... ...-|.. .........+++.+||+.||++|||+.|+++|+|+..
T Consensus 238 ~~~~--------~~~~p~~----~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~ 285 (299)
T 4g31_A 238 TDVR--------NLKFPPL----FTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFED 285 (299)
T ss_dssp HHHH--------TTCCCHH----HHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCC
T ss_pred HHHh--------cCCCCCC----CcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCC
Confidence 1100 0000111 1122334678999999999999999999999999864
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-47 Score=410.66 Aligned_cols=272 Identities=15% Similarity=0.224 Sum_probs=206.5
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
++|+..+.||+|+||+||+|+.. +|+.||||+++..... ..+.+.+|+++|++++|||||++++++.....- ....
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~-~~~~ 132 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPY-GEFK 132 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCT-TTCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeeccccc-ccCC
Confidence 57899999999999999999975 7999999999754322 235688999999999999999999998753211 1234
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
.+|+|||||+ |+|.+++.+.+ .+++..+..|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~~~-~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTSSS-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEEeCCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeee
Confidence 5899999996 78999998654 799999999999999999999999 999999999999999999999999999975
Q ss_pred hhcc------CCcceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhcccccccc-
Q 004195 637 AEAR------GKGSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTDEAR- 707 (769)
Q Consensus 637 ~~~~------~~~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~~~~- 707 (769)
.... ...+..++..|++||.+.+. .|+.++||||+|||+|||+||++||.+..... ...+...........
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~ 287 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVI 287 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGT
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHh
Confidence 4321 12334567788899987765 56999999999999999999999997654332 222222111111100
Q ss_pred ccc-----------cCcccc---CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 708 KSI-----------VDPAVM---NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 708 ~~~-----------~d~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
..+ +.+... ....+....++.+|+.+||+.||++|||++|+++|+||.+.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~ 351 (398)
T 4b99_A 288 QAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKY 351 (398)
T ss_dssp C-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTT
T ss_pred hhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcC
Confidence 000 000000 00001123458899999999999999999999999999754
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-46 Score=403.64 Aligned_cols=266 Identities=14% Similarity=0.241 Sum_probs=200.5
Q ss_pred HHHHHhcCCCCcCccccCCceeEEEEEeC----CCcEEEEEEccccCCCChhHHHHHHHHHhhc-cCCceeeEeeeeecc
Q 004195 474 ELKEATDCFDSSSFMCDASHGQIYKGKLT----DGTLVAIRSLKMSKKSSPHMYTYHIELISKL-RHSNLVSALGHCLDF 548 (769)
Q Consensus 474 el~~~t~~f~~~~~iG~G~~g~Vy~~~~~----~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~ 548 (769)
++.+..+.|+..+.||+|+||+||+|+.+ +++.||||++... .....+.+|+++++++ +|||||++++++.+.
T Consensus 15 ~~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~--~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~ 92 (361)
T 4f9c_A 15 AVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT--SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKN 92 (361)
T ss_dssp HSGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT--SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEET
T ss_pred hcCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc--cCHHHHHHHHHHHHHhcCCCCCceEEEEEEEC
Confidence 34456788999999999999999999853 4789999998643 3456789999999998 699999999999864
Q ss_pred CCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC-ceee
Q 004195 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN-FHVK 627 (769)
Q Consensus 549 ~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~-~~~k 627 (769)
+ ++|+|||||++|+|.+++. .+++.++..++.|++.||+|||++ +|+||||||+|||++.+ +.+|
T Consensus 93 ~-------~~~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~k 158 (361)
T 4f9c_A 93 D-------HVVIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYA 158 (361)
T ss_dssp T-------EEEEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEE
T ss_pred C-------EEEEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEE
Confidence 3 4899999999999999995 489999999999999999999999 99999999999999876 8999
Q ss_pred ecCCCCchhhhccC------------------------------CcceeecCCCcchhhhccC-CCCCCCCeeehhHHHH
Q 004195 628 INSYNLPLLAEARG------------------------------KGSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILI 676 (769)
Q Consensus 628 l~DFGla~~~~~~~------------------------------~~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~ 676 (769)
|+|||+|+...... ....+++..|++||.+.+. .|+.++||||+|||+|
T Consensus 159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ 238 (361)
T 4f9c_A 159 LVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFL 238 (361)
T ss_dssp ECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHH
T ss_pred ECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHH
Confidence 99999996432211 1122456678899988765 5899999999999999
Q ss_pred HHHhCCCCCCCch--hHHHHhhhhhcccccc---------------------cccc---------ccCcccc--------
Q 004195 677 EIIVGRPITSENV--VVLVKDLLQVNIGTDE---------------------ARKS---------IVDPAVM-------- 716 (769)
Q Consensus 677 elltG~~p~~~~~--~~~~~~~~~~~~~~~~---------------------~~~~---------~~d~~~~-------- 716 (769)
||+||++||.... .+....+... .+..+ .... ...|...
T Consensus 239 ell~G~~Pf~~~~~~~~~l~~I~~~-~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 317 (361)
T 4f9c_A 239 SLLSGRYPFYKASDDLTALAQIMTI-RGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHAT 317 (361)
T ss_dssp HHHHTCSSSSCCSSHHHHHHHHHHH-HCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC------------------
T ss_pred HHHHCCCCCCCCCCHHHHHHHHHHh-cCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccc
Confidence 9999999885432 1122111110 00000 0000 0000000
Q ss_pred -CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 717 -NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 717 -~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.+.....+.++.+|+.+||+.||++|||++|+++|+||..
T Consensus 318 ~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~ 358 (361)
T 4f9c_A 318 NLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKD 358 (361)
T ss_dssp ----CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTT
T ss_pred cccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence 0001112345889999999999999999999999999964
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-46 Score=421.14 Aligned_cols=255 Identities=16% Similarity=0.214 Sum_probs=206.1
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHH---HHHHhhccCCceeeEeeeeeccCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYH---IELISKLRHSNLVSALGHCLDFSLD 551 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E---i~~l~~l~H~nIv~l~~~~~~~~~~ 551 (769)
.++|+..+.||+|+||.||+|+.. +|+.||||++++.. ......+.+| +.+++.++|||||++++++.+.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~-- 265 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD-- 265 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS--
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECC--
Confidence 367999999999999999999976 79999999997532 2333334444 56677789999999999998744
Q ss_pred CCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCC
Q 004195 552 DPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSY 631 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DF 631 (769)
.+|+|||||+||+|.+++.+.+ .+++..+..|+.||+.||+|||++ +||||||||+|||+|.+|++||+||
T Consensus 266 -----~lylVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DF 336 (689)
T 3v5w_A 266 -----KLSFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDL 336 (689)
T ss_dssp -----EEEEEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred -----EEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEeccc
Confidence 4999999999999999998654 699999999999999999999999 9999999999999999999999999
Q ss_pred CCchhhhccCCcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccc
Q 004195 632 NLPLLAEARGKGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSI 710 (769)
Q Consensus 632 Gla~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (769)
|+|+........+.+++..|++||++.+ ..|+.++||||+||++|||+||++||.+........+.......
T Consensus 337 GlA~~~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~------- 409 (689)
T 3v5w_A 337 GLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM------- 409 (689)
T ss_dssp TTCEECSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHC-------
T ss_pred ceeeecCCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCC-------
Confidence 9998766555556677888899999864 57999999999999999999999999754322111111111110
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCC-----HHHHHHHhHhhh
Q 004195 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPS-----VEDTLWNLQFAT 756 (769)
Q Consensus 711 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~l~~~~ 756 (769)
.+.+...+++ ++.+|+.+||+.||++|++ ++||++|+||..
T Consensus 410 -~~~~p~~~S~----~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~ 455 (689)
T 3v5w_A 410 -AVELPDSFSP----ELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 455 (689)
T ss_dssp -CCCCCTTSCH----HHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTT
T ss_pred -CCCCCccCCH----HHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccC
Confidence 1112223333 4899999999999999998 799999999964
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-45 Score=418.19 Aligned_cols=256 Identities=14% Similarity=0.188 Sum_probs=211.5
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
.++|+..+.||+|+||.||+|+.+ +|+.||||++........+.+.+|+++|++++|||||++++++.+.. .
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~-------~ 228 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDN-------E 228 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSS-------E
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECC-------E
Confidence 468999999999999999999976 79999999997654444567899999999999999999999998643 4
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC--ceeeecCCCCch
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN--FHVKINSYNLPL 635 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~--~~~kl~DFGla~ 635 (769)
+|+|||||++|+|.+++......+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+
T Consensus 229 ~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~ 305 (573)
T 3uto_A 229 MVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTA 305 (573)
T ss_dssp EEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCE
T ss_pred EEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeecccee
Confidence 8999999999999999976555799999999999999999999999 99999999999999854 899999999997
Q ss_pred hhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHH-hhhhhccccccccccccCc
Q 004195 636 LAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVK-DLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 636 ~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~ 713 (769)
....... ...+++..|++||.+.+..|+.++||||+||++|||++|++||.+....... .+...... +++
T Consensus 306 ~~~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~--------~~~ 377 (573)
T 3uto_A 306 HLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWN--------MDD 377 (573)
T ss_dssp ECCTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC--------CCS
T ss_pred EccCCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCC--------CCc
Confidence 7654332 2334566788999999999999999999999999999999999865543322 22221111 111
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
......++ ++.+|+.+||+.||++|||+.|+++|+||..
T Consensus 378 ~~~~~~s~----~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~ 416 (573)
T 3uto_A 378 SAFSGISE----DGKDFIRKLLLADPNTRMTIHQALEHPWLTP 416 (573)
T ss_dssp GGGTTSCH----HHHHHHHTTSCSSGGGSCCHHHHHHSTTTSC
T ss_pred ccccCCCH----HHHHHHHHHccCChhHCcCHHHHhcCcCcCC
Confidence 11223343 4889999999999999999999999999874
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-44 Score=382.53 Aligned_cols=284 Identities=24% Similarity=0.475 Sum_probs=231.5
Q ss_pred CccccCHHHHHHHhcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeee
Q 004195 466 AYRTFTLDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGH 544 (769)
Q Consensus 466 ~~~~~~~~el~~~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~ 544 (769)
..+.|+++++..++++|+..+.||+|+||.||+|+..+|+.||||++..... .....+.+|++++++++||||++++++
T Consensus 16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred ccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEE
Confidence 3457899999999999999999999999999999988899999999986532 233478999999999999999999999
Q ss_pred eeccCCCCCCcceEEEEEeccCCCchhhhhcCC---CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeC
Q 004195 545 CLDFSLDDPSISIIYLIFEYAPNETLRSFISGP---GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD 621 (769)
Q Consensus 545 ~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld 621 (769)
|.+... .++||||+++|+|.+++... ...++|..+..++.|++.||+|||+.+.++|+||||||+||+++
T Consensus 96 ~~~~~~-------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~ 168 (326)
T 3uim_A 96 CMTPTE-------RLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD 168 (326)
T ss_dssp ECCSSC-------CEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEEC
T ss_pred EecCCc-------eEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEEC
Confidence 986443 68999999999999999743 23599999999999999999999998788999999999999999
Q ss_pred CCceeeecCCCCchhhhccCCc---ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCch-----hHHH
Q 004195 622 ENFHVKINSYNLPLLAEARGKG---SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENV-----VVLV 693 (769)
Q Consensus 622 ~~~~~kl~DFGla~~~~~~~~~---~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~-----~~~~ 693 (769)
.++.+||+|||+++........ ...++..|++||.+.+..++.++|||||||++|||+||++||.... ....
T Consensus 169 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~ 248 (326)
T 3uim_A 169 EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 248 (326)
T ss_dssp TTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBH
T ss_pred CCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhH
Confidence 9999999999999765432221 1224556788999888889999999999999999999999996321 1111
Q ss_pred HhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 694 KDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
..++.. ...........++......+.+....+.+++.+||+.||++|||+.||+++++....
T Consensus 249 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~ 311 (326)
T 3uim_A 249 LDWVKG-LLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGL 311 (326)
T ss_dssp HHHHTT-TTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSC
T ss_pred HHHHHH-HhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcch
Confidence 122211 112233455566666677888889999999999999999999999999999986543
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-44 Score=381.07 Aligned_cols=281 Identities=27% Similarity=0.507 Sum_probs=228.7
Q ss_pred ccCHHHHHHHhcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeecc
Q 004195 469 TFTLDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDF 548 (769)
Q Consensus 469 ~~~~~el~~~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~ 548 (769)
.+++.++..++++|+..+.||+|+||.||+|+.++|+.||||++........+.+.+|++++++++||||++++++|.+.
T Consensus 28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 107 (321)
T 2qkw_B 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDER 107 (321)
T ss_dssp --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCT
T ss_pred eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence 34555677789999999999999999999999888999999998866555567899999999999999999999999764
Q ss_pred CCCCCCcceEEEEEeccCCCchhhhhcCCC---CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCce
Q 004195 549 SLDDPSISIIYLIFEYAPNETLRSFISGPG---YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH 625 (769)
Q Consensus 549 ~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~---~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~ 625 (769)
+. .++||||+++|+|.+++.... ..++|..+..++.|+++||+|||+. +|+||||||+||+++.++.
T Consensus 108 ~~-------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~ 177 (321)
T 2qkw_B 108 NE-------MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFV 177 (321)
T ss_dssp TC-------CEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCC
T ss_pred Ce-------EEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCC
Confidence 33 799999999999999997432 3589999999999999999999998 9999999999999999999
Q ss_pred eeecCCCCchhhhccC----CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHH---Hhhhh
Q 004195 626 VKINSYNLPLLAEARG----KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLV---KDLLQ 698 (769)
Q Consensus 626 ~kl~DFGla~~~~~~~----~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~---~~~~~ 698 (769)
+||+|||+++...... .....++..|++||.+.+..++.++|||||||++|||+||+.||........ ..+..
T Consensus 178 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~ 257 (321)
T 2qkw_B 178 PKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV 257 (321)
T ss_dssp EEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTH
T ss_pred EEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhh
Confidence 9999999986543221 1223356678899998888999999999999999999999999865322111 11111
Q ss_pred hccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcc
Q 004195 699 VNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQG 760 (769)
Q Consensus 699 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~ 760 (769)
. ..........+++.......++....+.+++.+||+.||++|||+.|++++++.+.+.++
T Consensus 258 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~~ 318 (321)
T 2qkw_B 258 E-SHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE 318 (321)
T ss_dssp H-HHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSC
T ss_pred h-ccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhccc
Confidence 0 011223445566666667788889999999999999999999999999999998866543
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=371.03 Aligned_cols=263 Identities=19% Similarity=0.294 Sum_probs=215.7
Q ss_pred ccCHHHHHHHhcC----------CCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCc
Q 004195 469 TFTLDELKEATDC----------FDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSN 537 (769)
Q Consensus 469 ~~~~~el~~~t~~----------f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~n 537 (769)
.++++++..+++. |+..+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++|||
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n 103 (321)
T 2c30_A 24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103 (321)
T ss_dssp -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTT
T ss_pred cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCC
Confidence 5788898888875 666779999999999999976 79999999998766666778999999999999999
Q ss_pred eeeEeeeeeccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccc
Q 004195 538 LVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITD 617 (769)
Q Consensus 538 Iv~l~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~N 617 (769)
|++++++|...+ ..++||||+++|+|.+++... .+++..+..++.|+++||+|||+. +|+||||||+|
T Consensus 104 iv~~~~~~~~~~-------~~~lv~e~~~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~N 171 (321)
T 2c30_A 104 VVEMYKSYLVGE-------ELWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDS 171 (321)
T ss_dssp BCCEEEEEEETT-------EEEEEECCCCSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred cceEEEEEEECC-------EEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHH
Confidence 999999998643 389999999999999998754 589999999999999999999998 99999999999
Q ss_pred eeeCCCceeeecCCCCchhhhccC--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHh
Q 004195 618 VLLDENFHVKINSYNLPLLAEARG--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKD 695 (769)
Q Consensus 618 ILld~~~~~kl~DFGla~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~ 695 (769)
|+++.++.+||+|||++....... .....++..|++||...+..++.++|||||||++|||+||++||..........
T Consensus 172 Ill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~ 251 (321)
T 2c30_A 172 ILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK 251 (321)
T ss_dssp EEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH
T ss_pred EEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 999999999999999986553322 122344566788999988889999999999999999999999997654332222
Q ss_pred hhhhccccccccccccCccc--cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 696 LLQVNIGTDEARKSIVDPAV--MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 696 ~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.+... ..+.. ....+ ..+.+++.+||+.||++|||++|+++|+|+...
T Consensus 252 ~~~~~----------~~~~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 301 (321)
T 2c30_A 252 RLRDS----------PPPKLKNSHKVS----PVLRDFLERMLVRDPQERATAQELLDHPFLLQT 301 (321)
T ss_dssp HHHHS----------SCCCCTTGGGSC----HHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGC
T ss_pred HHhcC----------CCCCcCccccCC----HHHHHHHHHHccCChhhCcCHHHHhcChhhccC
Confidence 11111 01111 11223 348899999999999999999999999999754
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-43 Score=367.57 Aligned_cols=255 Identities=18% Similarity=0.263 Sum_probs=208.8
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
.++|...+.||+|+||+||+|+.. +|+.||||++........+.+.+|+.++++++||||+++++++.+.+ .
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-------~ 91 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD-------E 91 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-------E
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECC-------E
Confidence 457899999999999999999964 79999999998776666788999999999999999999999998643 3
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.++||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 92 ~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 166 (297)
T 3fxz_A 92 LWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 166 (297)
T ss_dssp EEEEEECCTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEECCCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 89999999999999999754 589999999999999999999999 9999999999999999999999999998655
Q ss_pred hccCC--cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccc
Q 004195 638 EARGK--GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAV 715 (769)
Q Consensus 638 ~~~~~--~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 715 (769)
..... ....++..|++||.+.+..++.++|||||||++|||+||+.||...........+..... .. ...
T Consensus 167 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~-----~~---~~~ 238 (297)
T 3fxz_A 167 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT-----PE---LQN 238 (297)
T ss_dssp CSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCS-----CC---CSC
T ss_pred CCcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-----CC---CCC
Confidence 43222 223445667889999889999999999999999999999999976543222111111000 00 011
Q ss_pred cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 716 MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 716 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
....+ ..+.+++.+||+.||++|||++|+++|+|+...
T Consensus 239 ~~~~~----~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~ 276 (297)
T 3fxz_A 239 PEKLS----AIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIA 276 (297)
T ss_dssp GGGSC----HHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred ccccC----HHHHHHHHHHccCChhHCcCHHHHhhChhhccc
Confidence 11223 348899999999999999999999999998754
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-42 Score=369.59 Aligned_cols=253 Identities=18% Similarity=0.260 Sum_probs=206.6
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.++|...+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++||||+++++++.+..
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~------ 87 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEK------ 87 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS------
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC------
Confidence 457888999999999999999974 7999999999765322 2356889999999999999999999997643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+++|+|.+++...+ .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 88 -~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~ 162 (328)
T 3fe3_A 88 -TLYLIMEYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSN 162 (328)
T ss_dssp -EEEEEECCCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCG
T ss_pred -EEEEEEECCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCce
Confidence 4899999999999999997544 689999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccCC-cceeecCCCcchhhhccCCCC-CCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCc
Q 004195 636 LAEARGK-GSAEVSSPAKKTSVLARTEQD-DKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 636 ~~~~~~~-~~~~~~~~~~~pe~~~~~~~~-~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
....... ....++..|++||.+.+..++ .++||||+||++|||+||+.||...........+... ..
T Consensus 163 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~-----------~~ 231 (328)
T 3fe3_A 163 EFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRG-----------KY 231 (328)
T ss_dssp GGSSSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-----------CC
T ss_pred ecCCCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-----------CC
Confidence 6543322 223455677889998877765 7999999999999999999999876544333322111 01
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.+....++ .+.+++.+||+.||++|||++|+++|+|+...
T Consensus 232 ~~p~~~s~----~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~ 271 (328)
T 3fe3_A 232 RIPFYMST----DCENLLKRFLVLNPIKRGTLEQIMKDRWINAG 271 (328)
T ss_dssp CCCTTSCH----HHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTT
T ss_pred CCCCCCCH----HHHHHHHHHCCCChhHCcCHHHHhcCHhhcCC
Confidence 11112233 48899999999999999999999999999754
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-42 Score=367.75 Aligned_cols=258 Identities=13% Similarity=0.184 Sum_probs=208.5
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
.++|...+.||+|+||.||+|+.. +|+.||+|.+... ....+.+.+|++++++++||||+++++++.+.+ .
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-------~ 75 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESME-------E 75 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETT-------E
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCC-------E
Confidence 467888999999999999999976 6899999998743 223456889999999999999999999997643 4
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC--CceeeecCCCCch
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE--NFHVKINSYNLPL 635 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~--~~~~kl~DFGla~ 635 (769)
.++||||+++|+|.+++......+++.++..++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+++
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~ 152 (321)
T 1tki_A 76 LVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQAR 152 (321)
T ss_dssp EEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCE
T ss_pred EEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCe
Confidence 8999999999999999986655799999999999999999999999 9999999999999987 7899999999997
Q ss_pred hhhccCCc-ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHH-HhhhhhccccccccccccCc
Q 004195 636 LAEARGKG-SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLV-KDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 636 ~~~~~~~~-~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~ 713 (769)
........ ...++..|++||...+..++.++|||||||++|||++|++||........ ..+...... .++
T Consensus 153 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~--------~~~ 224 (321)
T 1tki_A 153 QLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYT--------FDE 224 (321)
T ss_dssp ECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC--------CCH
T ss_pred ECCCCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCC--------CCh
Confidence 65433322 22344567889998887789999999999999999999999976543322 222211111 111
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
......++ ++.+++.+||+.||++|||+.|+++|+|+....+
T Consensus 225 ~~~~~~s~----~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~~ 266 (321)
T 1tki_A 225 EAFKEISI----EAMDFVDRLLVKERKSRMTASEALQHPWLKQKIE 266 (321)
T ss_dssp HHHTTSCH----HHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSCGG
T ss_pred hhhccCCH----HHHHHHHHHcCCChhHCcCHHHHhcChhhccCcc
Confidence 11122333 4889999999999999999999999999976543
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-41 Score=360.98 Aligned_cols=293 Identities=27% Similarity=0.364 Sum_probs=242.7
Q ss_pred cCCHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCC--CCCCCCcceEecC----CCeeEEEeCCCCCCCCCCCCCCCCC
Q 004195 27 QLQLFQYQTLVRIQQLLNYPSVSSSFNTTTVTDFCN--IEPTPSLTLVCYE----DNLTQLHIAGDNNNNINGGLAHNFS 100 (769)
Q Consensus 27 ~~~~~~~~~ll~~k~~~~~~~~l~~w~~~~~~~~c~--~~~~~~~~v~C~~----~~v~~l~l~~~~~~~~~~~l~~n~~ 100 (769)
.|.++|++||++||+++.+|..+++|+.+. +||. |.| |.|.. ++|+.|+++++.+.
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~~~--~~C~~~w~g-----v~C~~~~~~~~l~~L~L~~~~l~----------- 63 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTT--DCCNRTWLG-----VLCDTDTQTYRVNNLDLSGLNLP----------- 63 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTS--CTTTTCSTT-----EEECCSSSCCCEEEEEEECCCCS-----------
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCCCC--CCCcCCCcc-----eEeCCCCCCceEEEEECCCCCcc-----------
Confidence 478899999999999998887789998765 8998 874 99964 67999988776543
Q ss_pred CC--ccccccCCCCCCcEEEeec-ccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCC
Q 004195 101 TD--TFFSTLGSLSSLKVLSLVS-LGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVP 177 (769)
Q Consensus 101 ~~--~~~~~~~~l~~L~~L~L~~-n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p 177 (769)
+ .+|..|+++++|++|+|++ |++.+.+|..|+++++|++|+|++|++++.+|..|+++++|++|+|++|.+++.+|
T Consensus 64 -~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 142 (313)
T 1ogq_A 64 -KPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLP 142 (313)
T ss_dssp -SCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCC
T ss_pred -CCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCC
Confidence 3 4567888899999999995 88888899999999999999999999988899999999999999999999988889
Q ss_pred ccCcCCcCCCEEeccCCCCcccCCccccCCC-CCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCCCcccccCCc
Q 004195 178 SELSLLQVLSVLSLKNNSLSGFLPVSLTGLQ-SLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRLHKKMV 255 (769)
Q Consensus 178 ~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p~~~~~L~ 255 (769)
..|..+++|++|+|++|.+++.+|..+++++ +|++|++++|++++.+|. +..++ |+.|++++|.
T Consensus 143 ~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~------------- 208 (313)
T 1ogq_A 143 PSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM------------- 208 (313)
T ss_dssp GGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE-------------
T ss_pred hHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc-------------
Confidence 9999999999999999999988999998888 899999999998877775 44444 5555555554
Q ss_pred EEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCC
Q 004195 256 TLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSN 335 (769)
Q Consensus 256 ~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N 335 (769)
+++.+ |..+..+++|+.|+|++|.+++.+|. +..+++|++|+|++|++++.+|..+..+++|+.|+|++|
T Consensus 209 --------l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 278 (313)
T 1ogq_A 209 --------LEGDA-SVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFN 278 (313)
T ss_dssp --------EEECC-GGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSS
T ss_pred --------ccCcC-CHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCC
Confidence 44443 67778888888888888888876555 778888888999888888888888888888899999999
Q ss_pred cCCCCCCccccccCCCceEECCCCC-CCh
Q 004195 336 LLTGYLPSCLQVEAKTRLVLYSKNC-LSN 363 (769)
Q Consensus 336 ~l~g~~p~~~~~~~~l~~l~l~~N~-l~~ 363 (769)
+++|.+|.. ..+++++.+++++|. +.|
T Consensus 279 ~l~~~ip~~-~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 279 NLCGEIPQG-GNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp EEEEECCCS-TTGGGSCGGGTCSSSEEES
T ss_pred cccccCCCC-ccccccChHHhcCCCCccC
Confidence 988888886 667788888888885 444
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-42 Score=369.71 Aligned_cols=255 Identities=15% Similarity=0.214 Sum_probs=207.8
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC------ChhHHHHHHHHHhhccCCceeeEeeeeeccCC
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS------SPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~------~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~ 550 (769)
..+.|...+.||+|+||.||+|+.. +|+.||||.++..... ..+.+.+|+.++++++||||+++++++.+..
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~- 88 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRT- 88 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCC-
Confidence 3467889999999999999999976 6999999999765322 2467999999999999999999999997643
Q ss_pred CCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc----ee
Q 004195 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF----HV 626 (769)
Q Consensus 551 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~----~~ 626 (769)
..++||||+++|+|.+++...+ .+++..+..++.||+.||+|||+. +|+||||||+||++++++ .+
T Consensus 89 ------~~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~v 158 (361)
T 2yab_A 89 ------DVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHI 158 (361)
T ss_dssp ------EEEEEEECCCSCBHHHHHTTCS-CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCE
T ss_pred ------EEEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCE
Confidence 4899999999999999997654 799999999999999999999999 999999999999998877 79
Q ss_pred eecCCCCchhhhccC-CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHH-Hhhhhhccccc
Q 004195 627 KINSYNLPLLAEARG-KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLV-KDLLQVNIGTD 704 (769)
Q Consensus 627 kl~DFGla~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~ 704 (769)
||+|||+++...... .....++..|++||.+....++.++|||||||++|||++|++||........ ..+......
T Consensus 159 kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~-- 236 (361)
T 2yab_A 159 KLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD-- 236 (361)
T ss_dssp EECCCSSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC--
T ss_pred EEEecCCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC--
Confidence 999999997654432 2233455668889999888899999999999999999999999976543322 222211111
Q ss_pred cccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 705 EARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 705 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
+++......++ .+.+++.+||..||++|||+.|+++|+|+.
T Consensus 237 ------~~~~~~~~~s~----~~~~li~~~L~~dP~~R~t~~e~l~hp~~~ 277 (361)
T 2yab_A 237 ------FDEEFFSQTSE----LAKDFIRKLLVKETRKRLTIQEALRHPWIT 277 (361)
T ss_dssp ------CCHHHHTTSCH----HHHHHHHHHSCSSTTTSCCHHHHHTSTTTS
T ss_pred ------CCchhccCCCH----HHHHHHHHHCCCChhHCcCHHHHhcCcCcC
Confidence 11111223333 488999999999999999999999999986
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-42 Score=366.49 Aligned_cols=268 Identities=18% Similarity=0.266 Sum_probs=202.9
Q ss_pred hcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
.++|+..+.||+|+||+||+|+..+|+.||||++....... .+.+.+|++++++++||||+++++++.+..
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~------- 92 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSER------- 92 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSS-------
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCC-------
Confidence 46788899999999999999999889999999997543222 357889999999999999999999997643
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++||||++ |+|.+++......+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 93 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~ 168 (311)
T 3niz_A 93 CLTLVFEFME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARA 168 (311)
T ss_dssp CEEEEEECCS-EEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEEcCCC-CCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCcee
Confidence 3899999998 588888886666799999999999999999999999 999999999999999999999999999976
Q ss_pred hhccC--CcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhcc-cccccccccc
Q 004195 637 AEARG--KGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNI-GTDEARKSIV 711 (769)
Q Consensus 637 ~~~~~--~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~-~~~~~~~~~~ 711 (769)
..... .....++..|++||.+.+ ..++.++||||+||++|||+||++||...... ....+..... .....+....
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 248 (311)
T 3niz_A 169 FGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQ 248 (311)
T ss_dssp TTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGT
T ss_pred cCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhh
Confidence 54222 122334566788998765 56899999999999999999999999754322 2222111110 0011111000
Q ss_pred -------------CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 712 -------------DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 712 -------------d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
+........+....++.+++.+||+.||++|||++|+++|+||...
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 307 (311)
T 3niz_A 249 ELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL 307 (311)
T ss_dssp TSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTS
T ss_pred ccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccC
Confidence 0000000011122358899999999999999999999999999754
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=364.85 Aligned_cols=251 Identities=17% Similarity=0.226 Sum_probs=207.1
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc---CCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS---KKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|+..+.||+|+||.||+|+.. +|+.||||+++.. .....+.+.+|++++++++||||+++++++.+.+
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~------ 78 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD------ 78 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSS------
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCC------
Confidence 57888999999999999999976 6999999999754 2345567899999999999999999999998643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+++|+|.+++.+.+ .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 79 -~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~ 153 (337)
T 1o6l_A 79 -RLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK 153 (337)
T ss_dssp -EEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred -EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchh
Confidence 4899999999999999997543 689999999999999999999999 99999999999999999999999999987
Q ss_pred hhhc--cCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCc
Q 004195 636 LAEA--RGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 636 ~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
.... .......++..|++||.+.+..++.++|||||||++|||++|++||...........+... ..
T Consensus 154 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~-----------~~ 222 (337)
T 1o6l_A 154 EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME-----------EI 222 (337)
T ss_dssp CSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-----------CC
T ss_pred hcccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcC-----------CC
Confidence 5322 1223345667788999998889999999999999999999999999765443322211110 01
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCC-----CHHHHHHHhHhhh
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRP-----SVEDTLWNLQFAT 756 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~~~~ 756 (769)
.+....++ ++.+++.+||+.||++|| +++|+++|+||..
T Consensus 223 ~~p~~~s~----~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~ 266 (337)
T 1o6l_A 223 RFPRTLSP----EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266 (337)
T ss_dssp CCCTTSCH----HHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred CCCCCCCH----HHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCC
Confidence 11122333 488999999999999999 9999999999864
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-41 Score=361.72 Aligned_cols=254 Identities=17% Similarity=0.215 Sum_probs=206.0
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC------ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS------SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD 552 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~------~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~ 552 (769)
+.|...+.||+|+||.||+|+.. +|+.||||.+...... ..+.+.+|++++++++||||+++++++.+..
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--- 87 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT--- 87 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS---
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC---
Confidence 46888999999999999999976 6999999999754322 3467999999999999999999999997643
Q ss_pred CCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc----eeee
Q 004195 553 PSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF----HVKI 628 (769)
Q Consensus 553 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~----~~kl 628 (769)
..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||
T Consensus 88 ----~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl 159 (326)
T 2y0a_A 88 ----DVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKI 159 (326)
T ss_dssp ----EEEEEEECCCSCBHHHHHTTSS-CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEE
T ss_pred ----EEEEEEEcCCCCCHHHHHHhcC-CcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEE
Confidence 4899999999999999997554 699999999999999999999998 999999999999999887 7999
Q ss_pred cCCCCchhhhccC-CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHH-hhhhhccccccc
Q 004195 629 NSYNLPLLAEARG-KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVK-DLLQVNIGTDEA 706 (769)
Q Consensus 629 ~DFGla~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~-~~~~~~~~~~~~ 706 (769)
+|||+++...... .....++..|++||.+....++.++|||||||++|||++|++||......... .........
T Consensus 160 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~--- 236 (326)
T 2y0a_A 160 IDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF--- 236 (326)
T ss_dssp CCCTTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCC---
T ss_pred EECCCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCc---
Confidence 9999997654322 22334566788899998889999999999999999999999999765433222 211111110
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 707 RKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 707 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.+......++ .+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 237 -----~~~~~~~~~~----~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~ 277 (326)
T 2y0a_A 237 -----EDEYFSNTSA----LAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277 (326)
T ss_dssp -----CHHHHTTSCH----HHHHHHHHHSCSSGGGSCCHHHHHHSTTTSC
T ss_pred -----CccccccCCH----HHHHHHHHHccCChhhCCCHHHHhcCCCccC
Confidence 1111122333 4889999999999999999999999999864
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-41 Score=357.23 Aligned_cols=266 Identities=17% Similarity=0.259 Sum_probs=202.8
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccC--CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSK--KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|...+.||+|+||+||+|+..+|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+ .
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-------~ 74 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKK-------R 74 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSS-------C
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCC-------e
Confidence 4688889999999999999999889999999997543 223467889999999999999999999998644 3
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.++||||+++ +|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 75 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 150 (288)
T 1ob3_A 75 LVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAF 150 (288)
T ss_dssp EEEEEECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHH
T ss_pred EEEEEEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECcccccc
Confidence 8999999974 99999986555799999999999999999999999 9999999999999999999999999999765
Q ss_pred hccC--CcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhcc-cccccccc---
Q 004195 638 EARG--KGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNI-GTDEARKS--- 709 (769)
Q Consensus 638 ~~~~--~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~-~~~~~~~~--- 709 (769)
.... .....++..|++||.+.+ ..++.++|||||||++|||+||++||....... ......... .....+..
T Consensus 151 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
T 1ob3_A 151 GIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTE 230 (288)
T ss_dssp CC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGG
T ss_pred CccccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhc
Confidence 3221 122334566888998765 458999999999999999999999997644322 222211100 00000000
Q ss_pred --ccCccc-------cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 710 --IVDPAV-------MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 710 --~~d~~~-------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
..++.. ..........++.+++.+||+.||++|||++|+++|+||..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~ 286 (288)
T 1ob3_A 231 LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286 (288)
T ss_dssp STTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred ccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhh
Confidence 011110 00111122344889999999999999999999999999864
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-42 Score=362.79 Aligned_cols=255 Identities=20% Similarity=0.308 Sum_probs=203.0
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
++|...+.||+|+||+||+|+.. +++.||+|++........+.+.+|++++++++||||+++++++.+.. ..
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-------~~ 82 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDK-------RL 82 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT-------EE
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCC-------ee
Confidence 45778899999999999999976 69999999986554444567999999999999999999999998643 38
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
++||||+++|+|.+++......++|.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 159 (310)
T 3s95_A 83 NFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMV 159 (310)
T ss_dssp EEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC
T ss_pred EEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecc
Confidence 999999999999999986555799999999999999999999999 99999999999999999999999999996543
Q ss_pred ccCCc----------------ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccc
Q 004195 639 ARGKG----------------SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIG 702 (769)
Q Consensus 639 ~~~~~----------------~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~ 702 (769)
..... ...++..|++||.+.+..++.++|||||||++|||++|..|+..........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~------- 232 (310)
T 3s95_A 160 DEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF------- 232 (310)
T ss_dssp --------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTS-------
T ss_pred cccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHH-------
Confidence 22211 2234456788999988899999999999999999999998876432110000
Q ss_pred cccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 703 TDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 703 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
........++.....+++ .+.+++.+||+.||++|||+.|+++.+....
T Consensus 233 -~~~~~~~~~~~~~~~~~~----~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~ 281 (310)
T 3s95_A 233 -GLNVRGFLDRYCPPNCPP----SFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281 (310)
T ss_dssp -SBCHHHHHHHTCCTTCCT----THHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -hhhhhccccccCCCCCCH----HHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 000011111111223333 3889999999999999999999999888654
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-41 Score=356.37 Aligned_cols=277 Identities=27% Similarity=0.447 Sum_probs=218.6
Q ss_pred ccccCHHHHHHHhcCCCCc------CccccCCceeEEEEEeCCCcEEEEEEccccCC----CChhHHHHHHHHHhhccCC
Q 004195 467 YRTFTLDELKEATDCFDSS------SFMCDASHGQIYKGKLTDGTLVAIRSLKMSKK----SSPHMYTYHIELISKLRHS 536 (769)
Q Consensus 467 ~~~~~~~el~~~t~~f~~~------~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~----~~~~~~~~Ei~~l~~l~H~ 536 (769)
...|+++++..++++|... +.||+|+||.||+|+. +++.||||++..... ...+.+.+|++++++++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 4578999999999999888 8999999999999997 588999999975421 2246789999999999999
Q ss_pred ceeeEeeeeeccCCCCCCcceEEEEEeccCCCchhhhhcC--CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCcc
Q 004195 537 NLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISG--PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLK 614 (769)
Q Consensus 537 nIv~l~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlK 614 (769)
||+++++++.+.+. .++||||+++|+|.+++.. ....++|..+..++.|+++||+|||+. +|+|||||
T Consensus 91 ~i~~~~~~~~~~~~-------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlk 160 (307)
T 2nru_A 91 NLVELLGFSSDGDD-------LCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIK 160 (307)
T ss_dssp TBCCEEEEECSSSS-------CEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCC
T ss_pred CeEEEEEEEecCCc-------eEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCC
Confidence 99999999976443 7999999999999999873 234699999999999999999999998 99999999
Q ss_pred ccceeeCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchh
Q 004195 615 ITDVLLDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVV 690 (769)
Q Consensus 615 p~NILld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~ 690 (769)
|+||++++++.+||+|||+++....... ....++..|++||... +.++.++|||||||++|||+||++||.....
T Consensus 161 p~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~ 239 (307)
T 2nru_A 161 SANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHRE 239 (307)
T ss_dssp GGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHT-TEECTHHHHHHHHHHHHHHHHCCCSBCTTBS
T ss_pred HHHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhc-CCCCccchhHHHHHHHHHHHHCCCCcccCcc
Confidence 9999999999999999999865433221 1123345677888764 4689999999999999999999999875332
Q ss_pred HH-HHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 691 VL-VKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 691 ~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.. ...+............+.+++.+ ...+......+.+++.+||+.||++|||+.|+++++....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 240 PQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp SSBTTHHHHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred hHHHHHHHHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 11 11111111111112233333333 3456677888999999999999999999999999998653
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-41 Score=358.53 Aligned_cols=268 Identities=19% Similarity=0.295 Sum_probs=192.6
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
.++|+..+.||+|+||.||+|+.. +|+.||||+++.... ...+.+.+|++++++++|||||++++++.+.+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~------- 76 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTEN------- 76 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTT-------
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECC-------
Confidence 457889999999999999999975 699999999975532 33467899999999999999999999997633
Q ss_pred eEEEEEeccCCCchhhhhcC-----CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCC
Q 004195 557 IIYLIFEYAPNETLRSFISG-----PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSY 631 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~-----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DF 631 (769)
..++||||++ |+|.+++.. ....+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 77 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Df 152 (317)
T 2pmi_A 77 KLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDF 152 (317)
T ss_dssp EEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCC
T ss_pred eEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcC
Confidence 4899999998 699998862 123589999999999999999999999 9999999999999999999999999
Q ss_pred CCchhhhccC--CcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccc--ccc
Q 004195 632 NLPLLAEARG--KGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGT--DEA 706 (769)
Q Consensus 632 Gla~~~~~~~--~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~--~~~ 706 (769)
|+++...... .....++..|++||.+.+ ..++.++|||||||++|||+||++||...........+...... ...
T Consensus 153 g~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 232 (317)
T 2pmi_A 153 GLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESL 232 (317)
T ss_dssp SSCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTT
T ss_pred ccceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhH
Confidence 9997654221 222344567888998865 46899999999999999999999999765433222211111110 000
Q ss_pred cc---------------------cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhccc
Q 004195 707 RK---------------------SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQGL 761 (769)
Q Consensus 707 ~~---------------------~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~~ 761 (769)
+. +...+......+ .++.+++.+||+.||++|||++|+++|+||.......
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~ 304 (317)
T 2pmi_A 233 WPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLD----GNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYHHA 304 (317)
T ss_dssp CGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCC----HHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC--
T ss_pred hhhhhhhhhcccccccccchhHHHhhcccccccCC----HHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccchh
Confidence 00 001111111223 3489999999999999999999999999998765443
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-41 Score=365.92 Aligned_cols=257 Identities=17% Similarity=0.257 Sum_probs=206.3
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC-----CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK-----KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD 552 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~-----~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~ 552 (769)
.+.|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++.+..
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--- 99 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDG--- 99 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT---
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC---
Confidence 356889999999999999999975 79999999986431 224578999999999999999999999998643
Q ss_pred CCcceEEEEEeccCCCchhhhhcC---CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCce---e
Q 004195 553 PSISIIYLIFEYAPNETLRSFISG---PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH---V 626 (769)
Q Consensus 553 ~~~~~~~lV~Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~---~ 626 (769)
..++|||||++|+|.+.+.. .+..+++..+..++.||++||+|||+. +|+||||||+|||++.++. +
T Consensus 100 ----~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~v 172 (351)
T 3c0i_A 100 ----MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPV 172 (351)
T ss_dssp ----EEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCE
T ss_pred ----EEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcE
Confidence 48999999999999888752 233589999999999999999999999 9999999999999986654 9
Q ss_pred eecCCCCchhhhccCC--cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccc
Q 004195 627 KINSYNLPLLAEARGK--GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTD 704 (769)
Q Consensus 627 kl~DFGla~~~~~~~~--~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~ 704 (769)
||+|||+++....... ....++..|++||.+.+..++.++|||||||++|||+||++||..........+......
T Consensus 173 kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~i~~~~~~-- 250 (351)
T 3c0i_A 173 KLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYK-- 250 (351)
T ss_dssp EECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHHHHHTCCC--
T ss_pred EEecCcceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHHHHcCCCC--
Confidence 9999999976543321 223455678889999888899999999999999999999999987654433332221111
Q ss_pred cccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 705 EARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 705 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.++......++ .+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 251 ------~~~~~~~~~s~----~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~ 293 (351)
T 3c0i_A 251 ------MNPRQWSHISE----SAKDLVRRMLMLDPAERITVYEALNHPWLKER 293 (351)
T ss_dssp ------CCHHHHTTSCH----HHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTH
T ss_pred ------CCccccccCCH----HHHHHHHHHCCCChhHCcCHHHHhcChhhcCC
Confidence 11111122333 48899999999999999999999999999753
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-41 Score=352.67 Aligned_cols=258 Identities=18% Similarity=0.286 Sum_probs=207.4
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
.++|...+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+..
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 82 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT----- 82 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCC-----
Confidence 467888999999999999999976 68899999986432 234567899999999999999999999997643
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 83 --~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~ 156 (279)
T 3fdn_A 83 --RVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 156 (279)
T ss_dssp --EEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEE
T ss_pred --EEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEecccc
Confidence 4899999999999999997543 689999999999999999999998 9999999999999999999999999998
Q ss_pred hhhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCcc
Q 004195 635 LLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
............++..|++||.+.+..++.++||||||+++|||++|+.||...........+... ...
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-----------~~~ 225 (279)
T 3fdn_A 157 VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------EFT 225 (279)
T ss_dssp SCC--------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHT-----------CCC
T ss_pred ccCCcccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhC-----------CCC
Confidence 655444334444566788899988888999999999999999999999999865543322211110 111
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcccc
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQGLK 762 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~~~ 762 (769)
.....++ .+.+++.+||+.||++|||++|+++|+|+........
T Consensus 226 ~~~~~~~----~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~~~~~~ 269 (279)
T 3fdn_A 226 FPDFVTE----GARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 269 (279)
T ss_dssp CCTTSCH----HHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHHCSSCC
T ss_pred CCCcCCH----HHHHHHHHHhccChhhCCCHHHHhhCccccCCccCcc
Confidence 1122333 4889999999999999999999999999987655443
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-41 Score=369.27 Aligned_cols=257 Identities=15% Similarity=0.214 Sum_probs=208.5
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
.+.|+..+.||+|+||.||+|+.. +|+.||+|++..........+.+|++++++++|||||++++++.+.. .
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~-------~ 122 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKY-------E 122 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSS-------E
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCC-------E
Confidence 467899999999999999999976 68999999997554334567899999999999999999999997643 4
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC--CceeeecCCCCch
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE--NFHVKINSYNLPL 635 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~--~~~~kl~DFGla~ 635 (769)
.++||||+++|+|.+++......+++..+..++.|+++||+|||+. +|+||||||+|||++. ++.+||+|||+++
T Consensus 123 ~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~ 199 (387)
T 1kob_A 123 MVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLAT 199 (387)
T ss_dssp EEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCE
T ss_pred EEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccce
Confidence 8999999999999999986666799999999999999999999999 9999999999999974 5779999999997
Q ss_pred hhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHH-HhhhhhccccccccccccCc
Q 004195 636 LAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLV-KDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 636 ~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~ 713 (769)
....... ....++..|++||.+.+..++.++|||||||++|||+||++||........ ..+...... .++
T Consensus 200 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~--------~~~ 271 (387)
T 1kob_A 200 KLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWE--------FDE 271 (387)
T ss_dssp ECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCC--------CCS
T ss_pred ecCCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--------CCc
Confidence 6543322 223345667889999888899999999999999999999999976543222 221111110 112
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
......++ ++.+++.+||+.||++|||+.|+++|+|+...
T Consensus 272 ~~~~~~s~----~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 311 (387)
T 1kob_A 272 DAFSSVSP----EAKDFIKNLLQKEPRKRLTVHDALEHPWLKGD 311 (387)
T ss_dssp STTTTSCH----HHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSC
T ss_pred cccccCCH----HHHHHHHHHcCCChhHCcCHHHHhhCccccCC
Confidence 22223343 48899999999999999999999999998643
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=363.42 Aligned_cols=255 Identities=20% Similarity=0.266 Sum_probs=202.2
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
.++|+..+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|+.++++++|||||++++++.+..
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~------- 78 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN------- 78 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSS-------
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCC-------
Confidence 357888999999999999999976 799999999975432 23467899999999999999999999998643
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 154 (323)
T 3tki_A 79 IQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATV 154 (323)
T ss_dssp EEEEEEECCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEEcCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccce
Confidence 4899999999999999998654 699999999999999999999998 999999999999999999999999999965
Q ss_pred hhccC----CcceeecCCCcchhhhccCCC-CCCCCeeehhHHHHHHHhCCCCCCCchhH--HHHhhhhhcccccccccc
Q 004195 637 AEARG----KGSAEVSSPAKKTSVLARTEQ-DDKSDVYDIGIILIEIIVGRPITSENVVV--LVKDLLQVNIGTDEARKS 709 (769)
Q Consensus 637 ~~~~~----~~~~~~~~~~~~pe~~~~~~~-~~ksDVwS~Gvil~elltG~~p~~~~~~~--~~~~~~~~~~~~~~~~~~ 709 (769)
..... .....++..|++||.+.+..+ +.++|||||||++|||+||+.||...... ....+.....
T Consensus 155 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~-------- 226 (323)
T 3tki_A 155 FRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT-------- 226 (323)
T ss_dssp CEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCT--------
T ss_pred eccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccc--------
Confidence 43221 122334556788998877665 77999999999999999999999754321 1111111100
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 710 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
...+ ...+++ .+.+++.+||+.||++|||++|+++|+|+....
T Consensus 227 ~~~~--~~~~~~----~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~ 269 (323)
T 3tki_A 227 YLNP--WKKIDS----APLALLHKILVENPSARITIPDIKKDRWYNKPL 269 (323)
T ss_dssp TSTT--GGGSCH----HHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred cCCc--cccCCH----HHHHHHHHHccCChhhCcCHHHHhhChhhcccc
Confidence 0000 112333 378999999999999999999999999997543
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-41 Score=354.85 Aligned_cols=256 Identities=21% Similarity=0.306 Sum_probs=199.0
Q ss_pred HhcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
..++|+..+.||+|+||+||+|+. +|+.||||++....... .+.+.+|++++++++||||+++++++.+...
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~----- 108 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPN----- 108 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTC-----
T ss_pred ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCc-----
Confidence 345788899999999999999987 58899999997553322 2468899999999999999999999976443
Q ss_pred ceEEEEEeccCCCchhhhhcCCCC--CCCHHHHHHHHHHHHHHhcccccCCCCC--ccccCccccceeeCCCceeeecCC
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGY--KLTWVQRIAAAIAIVKGVQFLHTGIVPG--VFSNNLKITDVLLDENFHVKINSY 631 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~--~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDlKp~NILld~~~~~kl~DF 631 (769)
.++||||+++|+|.+++..... .+++..+..++.|+++||+|||+. + |+||||||+||+++.++.+||+||
T Consensus 109 --~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Df 183 (309)
T 3p86_A 109 --LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDF 183 (309)
T ss_dssp --CEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCC
T ss_pred --eEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCC
Confidence 7999999999999999986532 389999999999999999999998 7 999999999999999999999999
Q ss_pred CCchhhhccC--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccccc
Q 004195 632 NLPLLAEARG--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKS 709 (769)
Q Consensus 632 Gla~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (769)
|+++...... .....++..|++||.+.+..++.++|||||||++|||+||+.||...........+....
T Consensus 184 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~-------- 255 (309)
T 3p86_A 184 GLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKC-------- 255 (309)
T ss_dssp C-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSC--------
T ss_pred CCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC--------
Confidence 9997543322 223345667889999988889999999999999999999999997654333222111110
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 710 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
........+++ ++.+++.+||+.||++|||++|+++.+.....
T Consensus 256 -~~~~~~~~~~~----~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~ 298 (309)
T 3p86_A 256 -KRLEIPRNLNP----QVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK 298 (309)
T ss_dssp -CCCCCCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred -CCCCCCccCCH----HHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 01112223343 48899999999999999999999998876543
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-41 Score=351.21 Aligned_cols=253 Identities=18% Similarity=0.295 Sum_probs=206.5
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
++|+..+.||+|+||.||+|+..+++.||||++.... ...+++.+|++++++++||||+++++++.+... .+
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~-------~~ 81 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP-------IC 81 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS-------EE
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCc-------eE
Confidence 4577889999999999999999888899999998543 345789999999999999999999999976443 89
Q ss_pred EEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhc
Q 004195 560 LIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEA 639 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~ 639 (769)
+||||+++|+|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 158 (269)
T 4hcu_A 82 LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 158 (269)
T ss_dssp EEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred EEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccc
Confidence 99999999999999986666799999999999999999999999 999999999999999999999999999975432
Q ss_pred cC---CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCccc
Q 004195 640 RG---KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAV 715 (769)
Q Consensus 640 ~~---~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 715 (769)
.. .....++..|++||......++.++||||+|+++|||+| |+.||...........+... ..+..
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~----------~~~~~ 228 (269)
T 4hcu_A 159 DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG----------FRLYK 228 (269)
T ss_dssp HHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT----------CCCCC
T ss_pred cccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcC----------ccCCC
Confidence 21 111222335788999988899999999999999999999 99999765543332222111 01111
Q ss_pred cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 716 MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 716 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
....++ .+.+++.+||+.||++|||+.|+++++....+
T Consensus 229 ~~~~~~----~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 229 PRLAST----HVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp CTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCcCCH----HHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 122233 48899999999999999999999999987654
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=376.54 Aligned_cols=265 Identities=14% Similarity=0.200 Sum_probs=212.2
Q ss_pred CHHHHHHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc---CCCChhHHHHHHHHHhhccCCceeeEeeeee
Q 004195 471 TLDELKEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS---KKSSPHMYTYHIELISKLRHSNLVSALGHCL 546 (769)
Q Consensus 471 ~~~el~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~ 546 (769)
.+.++...+++|+..+.||+|+||+||+|+.. +++.||||+++.. .....+.+.+|+.++..++|||||+++++|.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 45566667889999999999999999999976 5889999999753 2233445899999999999999999999998
Q ss_pred ccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCcee
Q 004195 547 DFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHV 626 (769)
Q Consensus 547 ~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ 626 (769)
+.. ..++|||||++|+|.+++.+....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+
T Consensus 145 ~~~-------~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~v 214 (437)
T 4aw2_A 145 DDN-------NLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHI 214 (437)
T ss_dssp CSS-------EEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCE
T ss_pred eCC-------EEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCE
Confidence 643 48999999999999999987555799999999999999999999998 99999999999999999999
Q ss_pred eecCCCCchhhhccCC---cceeecCCCcchhhhc-----cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhh
Q 004195 627 KINSYNLPLLAEARGK---GSAEVSSPAKKTSVLA-----RTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLL 697 (769)
Q Consensus 627 kl~DFGla~~~~~~~~---~~~~~~~~~~~pe~~~-----~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~ 697 (769)
||+|||+++....... ....++..|++||.+. ...++.++|||||||++|||+||++||....... ...++
T Consensus 215 kL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~ 294 (437)
T 4aw2_A 215 RLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 294 (437)
T ss_dssp EECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH
T ss_pred EEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhh
Confidence 9999999965433222 2234566778899876 4568999999999999999999999997654332 22222
Q ss_pred hhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCC--CCCHHHHHHHhHhhh
Q 004195 698 QVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKD--RPSVEDTLWNLQFAT 756 (769)
Q Consensus 698 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~l~~~~ 756 (769)
... ....-|......+++ +.+++.+|+..+|++ ||+++|+++|+||..
T Consensus 295 ~~~-------~~~~~p~~~~~~s~~----~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~ 344 (437)
T 4aw2_A 295 NHK-------ERFQFPTQVTDVSEN----AKDLIRRLICSREHRLGQNGIEDFKKHPFFSG 344 (437)
T ss_dssp THH-------HHCCCCSSCCCSCHH----HHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTT
T ss_pred hcc-------ccccCCcccccCCHH----HHHHHHHHhcccccccCCCCHHHHhCCCccCC
Confidence 110 001112211223443 889999999988888 999999999999974
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-41 Score=364.13 Aligned_cols=258 Identities=17% Similarity=0.203 Sum_probs=207.2
Q ss_pred HHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 477 EATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 477 ~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
...++|...+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++|||||++++++.+..
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~---- 101 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEES---- 101 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS----
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC----
Confidence 34567999999999999999999976 6999999999755332 2356889999999999999999999998643
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC---ceeeecC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN---FHVKINS 630 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~---~~~kl~D 630 (769)
..++||||+++|+|.+++.... .+++..+..++.||++||+|||+. +|+||||||+|||++.+ +.+||+|
T Consensus 102 ---~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~D 174 (362)
T 2bdw_A 102 ---FHYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLAD 174 (362)
T ss_dssp ---EEEEEECCCCSCBHHHHHTTCS-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECC
T ss_pred ---EEEEEEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEee
Confidence 4899999999999999997554 689999999999999999999999 99999999999999765 4599999
Q ss_pred CCCchhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhh-hhccccccccc
Q 004195 631 YNLPLLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLL-QVNIGTDEARK 708 (769)
Q Consensus 631 FGla~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~-~~~~~~~~~~~ 708 (769)
||+++....... ....++..|++||.+.+..++.++|||||||++|||++|++||...........+ ......
T Consensus 175 fG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~----- 249 (362)
T 2bdw_A 175 FGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY----- 249 (362)
T ss_dssp CTTCBCCTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC-----
T ss_pred cCcceEecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCC-----
Confidence 999976543322 2334566788999998888999999999999999999999999765433222211 111110
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
........++ ++.+++.+||+.||++|||+.|+++|+|+...
T Consensus 250 ---~~~~~~~~~~----~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 291 (362)
T 2bdw_A 250 ---PSPEWDTVTP----EAKSLIDSMLTVNPKKRITADQALKVPWICNR 291 (362)
T ss_dssp ---CTTGGGGSCH----HHHHHHHHHSCSSGGGSCCHHHHTTSHHHHTH
T ss_pred ---CcccccCCCH----HHHHHHHHHcCCChhhCcCHHHHhcCcccCCC
Confidence 0111122333 48899999999999999999999999998643
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-41 Score=366.66 Aligned_cols=252 Identities=15% Similarity=0.214 Sum_probs=203.5
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc---CCCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS---KKSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~ 553 (769)
.++|+..+.||+|+||.||+|+.. +|+.||||+++.. .....+.+.+|.++++.+ +||||+++++++.+.+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~---- 97 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPD---- 97 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS----
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCC----
Confidence 467999999999999999999976 6899999999754 233456788999999988 6999999999998643
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
..|+||||+++|+|.+++.+.. .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 98 ---~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~ 170 (353)
T 3txo_A 98 ---RLFFVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGM 170 (353)
T ss_dssp ---EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred ---EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccc
Confidence 4899999999999999997543 689999999999999999999999 999999999999999999999999999
Q ss_pred chhhhcc--CCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccccccc
Q 004195 634 PLLAEAR--GKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIV 711 (769)
Q Consensus 634 a~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (769)
++..... ......++..|++||.+.+..++.++|||||||++|||+||++||...........+...
T Consensus 171 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~----------- 239 (353)
T 3txo_A 171 CKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND----------- 239 (353)
T ss_dssp CBCSCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-----------
T ss_pred eeecccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcC-----------
Confidence 8753222 222334566788999998888999999999999999999999999765543322221110
Q ss_pred CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCH------HHHHHHhHhhh
Q 004195 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSV------EDTLWNLQFAT 756 (769)
Q Consensus 712 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~~l~~~~ 756 (769)
........++ .+.+++.+|++.||++||++ +|+++|+||..
T Consensus 240 ~~~~p~~~~~----~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~ 286 (353)
T 3txo_A 240 EVVYPTWLHE----DATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKE 286 (353)
T ss_dssp CCCCCTTSCH----HHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTT
T ss_pred CCCCCCCCCH----HHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccC
Confidence 0111112333 48899999999999999998 99999999975
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-41 Score=367.94 Aligned_cols=254 Identities=19% Similarity=0.317 Sum_probs=196.1
Q ss_pred cCCCCcCccccCCceeEEEEEeC----CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT----DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~----~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
++|+..+.||+|+||.||+|+.. ++..||||+++.... ...+++.+|++++++++||||++++++|.+...
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---- 120 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP---- 120 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS----
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCc----
Confidence 46889999999999999999864 577899999975422 223578999999999999999999999976443
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
.++||||+++|+|.++++.....+++.++..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 121 ---~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 194 (373)
T 2qol_A 121 ---VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLG 194 (373)
T ss_dssp ---CEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC---
T ss_pred ---eEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccc
Confidence 7999999999999999987666799999999999999999999998 9999999999999999999999999999
Q ss_pred hhhhccCCcc-----eeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccc
Q 004195 635 LLAEARGKGS-----AEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARK 708 (769)
Q Consensus 635 ~~~~~~~~~~-----~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (769)
+......... ...+..|++||.+....++.++|||||||++|||++ |+.||...........+....
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~------- 267 (373)
T 2qol_A 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY------- 267 (373)
T ss_dssp -------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTE-------
T ss_pred cccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-------
Confidence 7654322111 112345888999988899999999999999999998 999987654433322221110
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.......++ ..+.+++.+||+.||++||++.||++.+.....
T Consensus 268 ---~~~~~~~~~----~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~ 309 (373)
T 2qol_A 268 ---RLPPPMDCP----AALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309 (373)
T ss_dssp ---ECCCCTTCB----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---CCCCCcccc----HHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHh
Confidence 011111233 348899999999999999999999999987644
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-41 Score=354.43 Aligned_cols=253 Identities=17% Similarity=0.229 Sum_probs=197.5
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--------------------------ChhHHHHHHHHHhh
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--------------------------SPHMYTYHIELISK 532 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--------------------------~~~~~~~Ei~~l~~ 532 (769)
++|...+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 57888999999999999999975 6899999999754211 12568899999999
Q ss_pred ccCCceeeEeeeeeccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccC
Q 004195 533 LRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNN 612 (769)
Q Consensus 533 l~H~nIv~l~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrD 612 (769)
++||||+++++++.+.. ....++||||+++++|.+++... .+++..+..++.|+++||+|||+. +|+|||
T Consensus 93 l~h~~iv~~~~~~~~~~-----~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~D 162 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPN-----EDHLYMVFELVNQGPVMEVPTLK--PLSEDQARFYFQDLIKGIEYLHYQ---KIIHRD 162 (298)
T ss_dssp CCCTTBCCEEEEEECSS-----SSEEEEEEECCTTCBSCCSSCSS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCC
T ss_pred CCCCCCCeEEEEEEcCC-----CCEEEEEEecCCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccC
Confidence 99999999999997532 34589999999999999876543 689999999999999999999999 999999
Q ss_pred ccccceeeCCCceeeecCCCCchhhhccCC--cceeecCCCcchhhhccCC---CCCCCCeeehhHHHHHHHhCCCCCCC
Q 004195 613 LKITDVLLDENFHVKINSYNLPLLAEARGK--GSAEVSSPAKKTSVLARTE---QDDKSDVYDIGIILIEIIVGRPITSE 687 (769)
Q Consensus 613 lKp~NILld~~~~~kl~DFGla~~~~~~~~--~~~~~~~~~~~pe~~~~~~---~~~ksDVwS~Gvil~elltG~~p~~~ 687 (769)
|||+||+++.++.+||+|||+++....... ....++..|++||.+.+.. ++.++|||||||++|||++|+.||..
T Consensus 163 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 242 (298)
T 2zv2_A 163 IKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD 242 (298)
T ss_dssp CCGGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCHHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 999999999999999999999976543221 2223455678899876554 37789999999999999999999976
Q ss_pred chhHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 688 NVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
.........+.... ........+++ .+.+++.+||+.||++|||+.|+++|+|+.
T Consensus 243 ~~~~~~~~~~~~~~---------~~~~~~~~~~~----~l~~li~~~l~~dp~~R~s~~e~l~hp~~~ 297 (298)
T 2zv2_A 243 ERIMCLHSKIKSQA---------LEFPDQPDIAE----DLKDLITRMLDKNPESRIVVPEIKLHPWVT 297 (298)
T ss_dssp SSHHHHHHHHHHCC---------CCCCSSSCCCH----HHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred ccHHHHHHHHhccc---------CCCCCccccCH----HHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence 54332222111100 00011123344 388999999999999999999999999985
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-41 Score=355.96 Aligned_cols=249 Identities=16% Similarity=0.232 Sum_probs=206.3
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc---CCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS---KKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|+..+.||+|+||.||+|+.. +|+.||+|+++.. .....+.+.+|+.+++.++||||+++++++.+..
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~------ 79 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQ------ 79 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSS------
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCC------
Confidence 56888999999999999999976 7999999999754 2344567889999999999999999999998643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 80 -~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~ 154 (318)
T 1fot_A 80 -QIFMIMDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAK 154 (318)
T ss_dssp -EEEEEECCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCE
T ss_pred -EEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcce
Confidence 4899999999999999998544 689999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccccccccccccCcc
Q 004195 636 LAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
..... .....++..|++||.+.+..++.++|||||||++|||++|++||....... ...+.... ..
T Consensus 155 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~------------~~ 221 (318)
T 1fot_A 155 YVPDV-TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAE------------LR 221 (318)
T ss_dssp ECSSC-BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCC------------CC
T ss_pred ecCCc-cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC------------CC
Confidence 65432 223345667889999988899999999999999999999999997654322 22222111 11
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCC-----CHHHHHHHhHhhh
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRP-----SVEDTLWNLQFAT 756 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~~~~ 756 (769)
+....++ ++.+++.+|++.||++|| +++|+++|+||..
T Consensus 222 ~p~~~~~----~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~ 264 (318)
T 1fot_A 222 FPPFFNE----DVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKE 264 (318)
T ss_dssp CCTTSCH----HHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSS
T ss_pred CCCCCCH----HHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccC
Confidence 1122333 488999999999999999 9999999999964
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-41 Score=366.85 Aligned_cols=252 Identities=18% Similarity=0.223 Sum_probs=199.7
Q ss_pred CcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEEE
Q 004195 484 SSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIF 562 (769)
Q Consensus 484 ~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV~ 562 (769)
..+.||+|+||.||+|+.. +|+.||+|+++.......+.+.+|++++++++|||||+++++|.+.+ ..++||
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-------~~~lv~ 165 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKN-------DIVLVM 165 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-------EEEEEE
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECC-------EEEEEE
Confidence 3578999999999999975 79999999998654445578999999999999999999999998643 489999
Q ss_pred eccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceee--CCCceeeecCCCCchhhhcc
Q 004195 563 EYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLL--DENFHVKINSYNLPLLAEAR 640 (769)
Q Consensus 563 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl--d~~~~~kl~DFGla~~~~~~ 640 (769)
||+++|+|.+++......+++..+..++.|+++||+|||+. +|+||||||+|||+ ++++.+||+|||+++.....
T Consensus 166 E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~ 242 (373)
T 2x4f_A 166 EYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR 242 (373)
T ss_dssp ECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTT
T ss_pred eCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCc
Confidence 99999999999875555799999999999999999999999 99999999999999 67789999999999765433
Q ss_pred CC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhccccccccccccCccccCC
Q 004195 641 GK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIGTDEARKSIVDPAVMNE 718 (769)
Q Consensus 641 ~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~ 718 (769)
.. ....++..|++||.+....++.++|||||||++|||+||++||...... ....+...... ..+.....
T Consensus 243 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~--------~~~~~~~~ 314 (373)
T 2x4f_A 243 EKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWD--------LEDEEFQD 314 (373)
T ss_dssp CBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC--------SCSGGGTT
T ss_pred cccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC--------CChhhhcc
Confidence 22 2233556788899988888999999999999999999999999765432 22222221111 11111123
Q ss_pred CCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 719 CSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 719 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
+++ ++.+++.+||+.||++|||+.|+++|+|+...
T Consensus 315 ~~~----~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~ 349 (373)
T 2x4f_A 315 ISE----EAKEFISKLLIKEKSWRISASEALKHPWLSDH 349 (373)
T ss_dssp SCH----HHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred CCH----HHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence 344 48899999999999999999999999998754
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-42 Score=359.95 Aligned_cols=269 Identities=18% Similarity=0.270 Sum_probs=201.3
Q ss_pred cCCCCcCccccCCceeEEEEEe-----CCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKL-----TDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~-----~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
++|+..+.||+|+||+||+|++ .+++.||||++........+.+.+|++++++++||||++++++|...+.
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---- 85 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR---- 85 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHH----
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC----
Confidence 4677889999999999999984 2688999999985544344678999999999999999999999865322
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
...++||||+++|+|.+++......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 86 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~ 161 (295)
T 3ugc_A 86 -RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLT 161 (295)
T ss_dssp -TSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSC
T ss_pred -CceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCccc
Confidence 237999999999999999986655699999999999999999999998 9999999999999999999999999999
Q ss_pred hhhhccCCc-----ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccc--ccc
Q 004195 635 LLAEARGKG-----SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTD--EAR 707 (769)
Q Consensus 635 ~~~~~~~~~-----~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~--~~~ 707 (769)
+........ ....+..|++||.+.+..++.++|||||||++|||+||..|+................... ...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (295)
T 3ugc_A 162 KVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 241 (295)
T ss_dssp C-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHH
T ss_pred ccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHH
Confidence 765433211 1112234788999988899999999999999999999999887543221111000000000 000
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 708 KSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 708 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.+.+........+...+.++.+++.+||+.||++|||+.|+++.+....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~ 290 (295)
T 3ugc_A 242 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 290 (295)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 0000011011112223344899999999999999999999999998664
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-41 Score=359.02 Aligned_cols=255 Identities=18% Similarity=0.286 Sum_probs=203.2
Q ss_pred cCCCCcCccccCCceeEEEEEeC----CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT----DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~----~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
++|...+.||+|+||.||+|++. .+..||||+++.... ...+.+.+|++++++++||||+++++++.+...
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---- 124 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRL---- 124 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGC----
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCc----
Confidence 45778899999999999999974 345699999975422 224578999999999999999999999976443
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
.++||||+++|+|.++++.....+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 125 ---~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 198 (325)
T 3kul_A 125 ---AMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLS 198 (325)
T ss_dssp ---CEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSC
T ss_pred ---cEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcc
Confidence 7999999999999999986656799999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhccCCcce-----eecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccc
Q 004195 635 LLAEARGKGSA-----EVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARK 708 (769)
Q Consensus 635 ~~~~~~~~~~~-----~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (769)
+.......... ..+..|++||.+.+..++.++|||||||++|||++ |+.||...........+...
T Consensus 199 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~-------- 270 (325)
T 3kul_A 199 RVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG-------- 270 (325)
T ss_dssp EECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTT--------
T ss_pred cccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC--------
Confidence 76543322111 11224788999988889999999999999999999 99999765443332222111
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
..+.....+++ .+.+++.+||+.||++|||+.|+++.+......
T Consensus 271 --~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~ 314 (325)
T 3kul_A 271 --YRLPAPMGCPH----ALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS 314 (325)
T ss_dssp --CCCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred --CCCCCCCCcCH----HHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence 01111123343 488999999999999999999999999876543
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-41 Score=372.74 Aligned_cols=257 Identities=17% Similarity=0.173 Sum_probs=205.5
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
..++|+..+.||+|+||.||+|+.. +|+.||+|++...... ..+.+.+|++++++++|||||++++++.+.+
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~----- 83 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEG----- 83 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSS-----
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECC-----
Confidence 4567899999999999999999965 7999999999754322 2356889999999999999999999998643
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeC---CCceeeecCC
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD---ENFHVKINSY 631 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld---~~~~~kl~DF 631 (769)
..++||||+++|+|.+.+.... .+++..+..++.|+++||+|||+. +|+||||||+|||++ +++.+||+||
T Consensus 84 --~~~lv~E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DF 157 (444)
T 3soa_A 84 --HHYLIFDLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADF 157 (444)
T ss_dssp --EEEEEECCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCC
T ss_pred --EEEEEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccC
Confidence 4899999999999999987554 689999999999999999999999 999999999999998 4678999999
Q ss_pred CCchhhhccCC--cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhh-hccccccccc
Q 004195 632 NLPLLAEARGK--GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQ-VNIGTDEARK 708 (769)
Q Consensus 632 Gla~~~~~~~~--~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~-~~~~~~~~~~ 708 (769)
|+++....... ....++..|++||.+.+..++.++||||+||++|||++|++||...........+. .....
T Consensus 158 G~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~----- 232 (444)
T 3soa_A 158 GLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF----- 232 (444)
T ss_dssp SSCBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCC-----
T ss_pred ceeEEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCC-----
Confidence 99966543322 22345567888999988889999999999999999999999997654433222221 11110
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
........++ ++.+++.+||+.||++|||+.|+++|+|+...
T Consensus 233 ---~~~~~~~~s~----~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~~ 274 (444)
T 3soa_A 233 ---PSPEWDTVTP----EAKDLINKMLTINPSKRITAAEALKHPWISHR 274 (444)
T ss_dssp ---CTTTTTTSCH----HHHHHHHHHSCSSTTTSCCHHHHHHSCTTHHH
T ss_pred ---CccccccCCH----HHHHHHHHHcCCChhHCCCHHHHhcCccccCC
Confidence 1111122333 48899999999999999999999999998754
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-41 Score=397.85 Aligned_cols=329 Identities=24% Similarity=0.289 Sum_probs=226.3
Q ss_pred CcCccCCHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCCCCCCcceEecCCCeeEEEeCCCCCCCC----C---C--
Q 004195 23 PHSNQLQLFQYQTLVRIQQLLNYPSVSSSFNTTTVTDFCNIEPTPSLTLVCYEDNLTQLHIAGDNNNNI----N---G-- 93 (769)
Q Consensus 23 ~~~~~~~~~~~~~ll~~k~~~~~~~~l~~w~~~~~~~~c~~~~~~~~~v~C~~~~v~~l~l~~~~~~~~----~---~-- 93 (769)
++++++.+.|++||++||+++.||..+++|+.++ +||.|.| |+|+.++|+.|++++..+.+. + .
T Consensus 4 ~~~~~~~~~~~~all~~k~~~~~~~~l~~W~~~~--~~C~w~g-----v~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L 76 (768)
T 3rgz_A 4 ASPSQSLYREIHQLISFKDVLPDKNLLPDWSSNK--NPCTFDG-----VTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSL 76 (768)
T ss_dssp ----CCHHHHHHHHHHHHTTCSCTTSSTTCCTTS--CGGGSTT-----EEEETTEEEEEECTTSCCCEEHHHHHHHTTTC
T ss_pred CccccCCHHHHHHHHHHHhhCCCcccccCCCCCC--CCcCCcc-----eEECCCcEEEEECCCCCcCCccCccChhHhcc
Confidence 3444556789999999999998887889998665 8999985 999988999999998766542 1 1
Q ss_pred ---CCCCCCCCCcc--ccccCCCCCCcEEEeecccccCCCCc--cccCCCcCceeeccCcccCCcCCccc-cCCCcCCEE
Q 004195 94 ---GLAHNFSTDTF--FSTLGSLSSLKVLSLVSLGLWGPLPG--SIAHSSSLEILNLSSNYLSGSIPVQI-SSLRNLQTL 165 (769)
Q Consensus 94 ---~l~~n~~~~~~--~~~~~~l~~L~~L~L~~n~l~g~~p~--~~~~l~~L~~L~Ls~N~l~g~~p~~~-~~l~~L~~L 165 (769)
++..+...+.. |..++++++|++|+|++|.++|.+|. .++++++|++|||++|.+++.+|..+ .++++|++|
T Consensus 77 ~~L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L 156 (768)
T 3rgz_A 77 TGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVL 156 (768)
T ss_dssp TTCCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEE
T ss_pred CcccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEE
Confidence 11112222333 37888999999999999999988888 89999999999999999988888776 788888888
Q ss_pred EcccCcCCccCCcc---CcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCc
Q 004195 166 ILDDNKFTGAVPSE---LSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNY 242 (769)
Q Consensus 166 ~L~~N~l~~~~p~~---~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~ 242 (769)
+|++|++++..|.. +.++++|++|+|++|.+++.+|. .++++|++|+|++|++++.+|.++++++|++|++++|.
T Consensus 157 ~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~n~ 234 (768)
T 3rgz_A 157 DLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNK 234 (768)
T ss_dssp ECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCBCTTCCSCCEEECCSSC
T ss_pred ECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcccccCCCCCEEECcCCc
Confidence 88888888877776 67777777777777777765553 66777777777777777766667777777777777777
Q ss_pred CCCCCccc---ccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCC-CCCCEEEccCCcCCcccc
Q 004195 243 FGPRFPRL---HKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSL-PSITYLDIHGNKLTGLLL 318 (769)
Q Consensus 243 l~~~~p~~---~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l-~~L~~L~l~~N~l~~~~~ 318 (769)
+++.+|.. +++|++|++++|.+.+.+ |.. .+++|++|+|++|.+++.+|..+... ++|++|+|++|++++.+|
T Consensus 235 l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~-~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p 311 (768)
T 3rgz_A 235 LSGDFSRAISTCTELKLLNISSNQFVGPI-PPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVP 311 (768)
T ss_dssp CCSCHHHHTTTCSSCCEEECCSSCCEESC-CCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCC
T ss_pred CCCcccHHHhcCCCCCEEECCCCcccCcc-Ccc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccc
Confidence 76665543 345666666666665544 322 45555555555555555555555443 555555555555555555
Q ss_pred ccCCCCCCCcEEEccCCcCCCCCCcc-ccccCCCceEECCCCCCCh
Q 004195 319 QNMSCNPQLAFVDLSSNLLTGYLPSC-LQVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 319 ~~~~~l~~L~~l~l~~N~l~g~~p~~-~~~~~~l~~l~l~~N~l~~ 363 (769)
..++.+++|+.|++++|+++|.+|.. +..+++++.+++++|.+++
T Consensus 312 ~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~ 357 (768)
T 3rgz_A 312 PFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSG 357 (768)
T ss_dssp GGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEE
T ss_pred hHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCc
Confidence 55555555555555555555555543 4555555555555555443
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-41 Score=363.49 Aligned_cols=253 Identities=18% Similarity=0.269 Sum_probs=206.6
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCC
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDD 552 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~ 552 (769)
..++|...+.||+|+||.||+|+.+ +|+.||||+++... ....+.+.+|..++..+ +||||+++++++.+..
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~--- 91 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE--- 91 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS---
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC---
Confidence 4568999999999999999999976 68999999997542 34456788899999887 8999999999998643
Q ss_pred CCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCC
Q 004195 553 PSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYN 632 (769)
Q Consensus 553 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFG 632 (769)
..++||||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 92 ----~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG 163 (345)
T 1xjd_A 92 ----NLFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFG 163 (345)
T ss_dssp ----EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred ----EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeECh
Confidence 4899999999999999997543 689999999999999999999999 99999999999999999999999999
Q ss_pred Cchhhhc--cCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccc
Q 004195 633 LPLLAEA--RGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSI 710 (769)
Q Consensus 633 la~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (769)
+++.... .......++..|++||.+.+..++.++|||||||++|||++|++||...........+...
T Consensus 164 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~---------- 233 (345)
T 1xjd_A 164 MCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD---------- 233 (345)
T ss_dssp TCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC----------
T ss_pred hhhhcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhC----------
Confidence 9965322 1223334556788899998888999999999999999999999999765443322222110
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHH-HHHHHhHhhh
Q 004195 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVE-DTLWNLQFAT 756 (769)
Q Consensus 711 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl~~l~~~~ 756 (769)
.+.+....++ ++.+++.+||+.||++||++. |+++|+||..
T Consensus 234 -~~~~p~~~s~----~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~ 275 (345)
T 1xjd_A 234 -NPFYPRWLEK----EAKDLLVKLFVREPEKRLGVRGDIRQHPLFRE 275 (345)
T ss_dssp -CCCCCTTSCH----HHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTT
T ss_pred -CCCCCcccCH----HHHHHHHHHhcCCHhHcCCChHHHHcCccccC
Confidence 1111122333 488999999999999999998 9999999864
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-41 Score=365.09 Aligned_cols=255 Identities=19% Similarity=0.331 Sum_probs=202.5
Q ss_pred cCCCCcCccccCCceeEEEEEeC--------CCcEEEEEEccccCC-CChhHHHHHHHHHhhc-cCCceeeEeeeeeccC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT--------DGTLVAIRSLKMSKK-SSPHMYTYHIELISKL-RHSNLVSALGHCLDFS 549 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~--------~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~ 549 (769)
++|...+.||+|+||.||+|+.. ++..||||+++.... ...+.+.+|+++++++ +|||||+++++|.+.+
T Consensus 81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 160 (370)
T 2psq_A 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 160 (370)
T ss_dssp GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS
T ss_pred HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC
Confidence 56888899999999999999852 356799999975422 1235689999999999 8999999999997644
Q ss_pred CCCCCcceEEEEEeccCCCchhhhhcCCC---------------CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCcc
Q 004195 550 LDDPSISIIYLIFEYAPNETLRSFISGPG---------------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLK 614 (769)
Q Consensus 550 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlK 614 (769)
. .++||||+++|+|.+++.... ..+++.++..++.||++||+|||+. +|+|||||
T Consensus 161 ~-------~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlk 230 (370)
T 2psq_A 161 P-------LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLA 230 (370)
T ss_dssp S-------CEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCC
T ss_pred C-------EEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ceeccccc
Confidence 3 799999999999999997332 3589999999999999999999999 99999999
Q ss_pred ccceeeCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCch
Q 004195 615 ITDVLLDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENV 689 (769)
Q Consensus 615 p~NILld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~ 689 (769)
|+|||++.++.+||+|||+++....... .....+..|++||.+.+..++.++|||||||++|||+| |+.||....
T Consensus 231 p~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~ 310 (370)
T 2psq_A 231 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 310 (370)
T ss_dssp GGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred hhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCC
Confidence 9999999999999999999975543221 11122345788999988899999999999999999999 999987654
Q ss_pred hHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 690 VVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
.......+... ..+.....+++ .+.+++.+||+.||++|||+.|+++++..+...
T Consensus 311 ~~~~~~~~~~~----------~~~~~~~~~~~----~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~ 365 (370)
T 2psq_A 311 VEELFKLLKEG----------HRMDKPANCTN----ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 365 (370)
T ss_dssp GGGHHHHHHTT----------CCCCCCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcC----------CCCCCCCCCCH----HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 33322222111 01111223333 488999999999999999999999999876543
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-41 Score=363.25 Aligned_cols=253 Identities=17% Similarity=0.224 Sum_probs=203.5
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc---CCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS---KKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|...+.||+|+||.||+|+.. +|+.||||++... .....+.+.+|+++++.++||||+++++++.+..
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~------ 82 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPT------ 82 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSS------
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC------
Confidence 57888999999999999999974 7999999998643 2233467899999999999999999999998643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+ +|+|.+++...+ .+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++.
T Consensus 83 -~~~lv~E~~-~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~ 156 (336)
T 3h4j_B 83 -DIVMVIEYA-GGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSN 156 (336)
T ss_dssp -EEEEEECCC-CEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTB
T ss_pred -EEEEEEECC-CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccce
Confidence 489999999 689999887443 689999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccCC-cceeecCCCcchhhhccCCC-CCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCc
Q 004195 636 LAEARGK-GSAEVSSPAKKTSVLARTEQ-DDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 636 ~~~~~~~-~~~~~~~~~~~pe~~~~~~~-~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
....... ....++..|++||.+.+..+ ++++|||||||++|||++|+.||.+.........+ .. ...
T Consensus 157 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i----~~-------~~~ 225 (336)
T 3h4j_B 157 IMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKV----NS-------CVY 225 (336)
T ss_dssp TTTTSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCC----CS-------SCC
T ss_pred eccCCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHH----Hc-------CCC
Confidence 6544332 33345567888998877666 78999999999999999999999754321111000 00 001
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
......+ ..+.+++.+||+.||++|||++|+++|+||....+
T Consensus 226 ~~p~~~s----~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~~ 267 (336)
T 3h4j_B 226 VMPDFLS----PGAQSLIRRMIVADPMQRITIQEIRRDPWFNVNLP 267 (336)
T ss_dssp CCCTTSC----HHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTTCC
T ss_pred CCcccCC----HHHHHHHHHHcCCChhHCcCHHHHHhChhhccCCc
Confidence 1112233 34889999999999999999999999999986543
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-41 Score=349.84 Aligned_cols=254 Identities=19% Similarity=0.266 Sum_probs=205.4
Q ss_pred hcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
.++|+..+.||+|+||.||+|+.+++..||||+++... ...+++.+|++++++++||||+++++++.+... .
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~-------~ 78 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYP-------I 78 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS-------E
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCc-------e
Confidence 35688889999999999999999888899999997543 345779999999999999999999999976433 8
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
++||||+++++|.+++...+..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 155 (268)
T 3sxs_A 79 YIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVL 155 (268)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECC
T ss_pred EEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecc
Confidence 999999999999999986555699999999999999999999999 99999999999999999999999999997553
Q ss_pred ccCCcc---eeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCcc
Q 004195 639 ARGKGS---AEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 639 ~~~~~~---~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
...... ..++..|++||...+..++.++||||||+++|||+| |+.||...........+.... .+.
T Consensus 156 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~----------~~~ 225 (268)
T 3sxs_A 156 DDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGH----------RLY 225 (268)
T ss_dssp TTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTC----------CCC
T ss_pred hhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCC----------CCC
Confidence 322111 112234788999888889999999999999999999 999987654332222111100 011
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.....++ .+.+++.+||+.||++|||+.|++++++...+
T Consensus 226 ~~~~~~~----~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (268)
T 3sxs_A 226 RPHLASD----TIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264 (268)
T ss_dssp CCTTSCH----HHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred CCCcChH----HHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence 1112233 48899999999999999999999999987644
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-40 Score=351.72 Aligned_cols=275 Identities=19% Similarity=0.271 Sum_probs=204.5
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-----CChhHHHHHHHHHhhcc---CCceeeEeeeeecc
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-----SSPHMYTYHIELISKLR---HSNLVSALGHCLDF 548 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-----~~~~~~~~Ei~~l~~l~---H~nIv~l~~~~~~~ 548 (769)
.+++|+..+.||+|+||+||+|+.. +|+.||||+++.... .....+.+|++++++++ ||||++++++|.+.
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 3678999999999999999999964 799999999975422 22357888998888775 99999999999764
Q ss_pred CCCCCCcceEEEEEeccCCCchhhhhcCCC-CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceee
Q 004195 549 SLDDPSISIIYLIFEYAPNETLRSFISGPG-YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVK 627 (769)
Q Consensus 549 ~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~k 627 (769)
..+ .....++||||++ |+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+|
T Consensus 87 ~~~--~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~k 160 (308)
T 3g33_A 87 RTD--REIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVK 160 (308)
T ss_dssp CSS--SEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEE
T ss_pred CCC--CceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEE
Confidence 321 2335799999997 69999998543 3499999999999999999999999 999999999999999999999
Q ss_pred ecCCCCchhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHH-Hhhhhhc-cccc
Q 004195 628 INSYNLPLLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLV-KDLLQVN-IGTD 704 (769)
Q Consensus 628 l~DFGla~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~-~~~~~~~-~~~~ 704 (769)
|+|||+++....... ....++..|++||.+.+..++.++|||||||++|||+||++||........ ..+.... ....
T Consensus 161 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 240 (308)
T 3g33_A 161 LADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 240 (308)
T ss_dssp ECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred EeeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 999999976543322 233456678899999888999999999999999999999999976543322 2222111 0111
Q ss_pred cccccc-------cCcccc---CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 705 EARKSI-------VDPAVM---NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 705 ~~~~~~-------~d~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
..+... +.+... ....++....+.+++.+||+.||++|||+.|+++|+|+....
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~~ 304 (308)
T 3g33_A 241 DDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDE 304 (308)
T ss_dssp TTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC----
T ss_pred hhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCCC
Confidence 111000 000000 000011234588999999999999999999999999998653
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-41 Score=365.26 Aligned_cols=255 Identities=18% Similarity=0.201 Sum_probs=202.0
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC---CChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK---SSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~ 553 (769)
.++|+..+.||+|+||.||+|+.+ +++.||||+++.... ...+.+.+|..++.++ +|||||++++++.+..
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~---- 126 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES---- 126 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSS----
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECC----
Confidence 356888999999999999999976 688999999986532 2235688999999887 8999999999998643
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
..++||||+++|+|.+++.+.+ .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 127 ---~~~lV~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGl 199 (396)
T 4dc2_A 127 ---RLFFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGM 199 (396)
T ss_dssp ---EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred ---EEEEEEEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecce
Confidence 4899999999999999998543 699999999999999999999999 999999999999999999999999999
Q ss_pred chhhhc--cCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH------HHhhhhhcccccc
Q 004195 634 PLLAEA--RGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL------VKDLLQVNIGTDE 705 (769)
Q Consensus 634 a~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~------~~~~~~~~~~~~~ 705 (769)
++.... .......++..|++||.+.+..++.++|||||||++|||++|++||....... .....+....
T Consensus 200 a~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~--- 276 (396)
T 4dc2_A 200 CKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--- 276 (396)
T ss_dssp CBCCCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHH---
T ss_pred eeecccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhc---
Confidence 975221 22233455667889999998899999999999999999999999996321100 0000000000
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCH------HHHHHHhHhhh
Q 004195 706 ARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSV------EDTLWNLQFAT 756 (769)
Q Consensus 706 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~~l~~~~ 756 (769)
....+....+ .++.+++.+||+.||++||++ +||++|+||..
T Consensus 277 -----~~~~~p~~~s----~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~ 324 (396)
T 4dc2_A 277 -----KQIRIPRSLS----VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 324 (396)
T ss_dssp -----CCCCCCTTSC----HHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTT
T ss_pred -----cccCCCCcCC----HHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccC
Confidence 0111112233 348899999999999999984 89999999964
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-40 Score=359.57 Aligned_cols=250 Identities=18% Similarity=0.217 Sum_probs=207.5
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc---CCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS---KKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|+..+.||+|+||.||+|+.. +|+.||||++... .....+.+.+|++++++++||||+++++++.+..
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~------ 114 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS------ 114 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS------
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC------
Confidence 57888999999999999999976 6999999999654 2344567889999999999999999999998643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+++|+|.+++.+.+ .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 115 -~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~ 189 (350)
T 1rdq_E 115 -NLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK 189 (350)
T ss_dssp -EEEEEEECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred -EEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccce
Confidence 4899999999999999998544 589999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccc
Q 004195 636 LAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAV 715 (769)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 715 (769)
...... ....++..|++||.+.+..++.++|||||||++|||++|++||...........+... ...+
T Consensus 190 ~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~-----------~~~~ 257 (350)
T 1rdq_E 190 RVKGRT-WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG-----------KVRF 257 (350)
T ss_dssp ECSSCB-CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-----------CCCC
T ss_pred eccCCc-ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcC-----------CCCC
Confidence 654332 2345667788999998889999999999999999999999999765433222211110 0111
Q ss_pred cCCCCHHHHHHHHHHHHHcCcCCCCCCCC-----HHHHHHHhHhhh
Q 004195 716 MNECSDESLKRMMELCLRCLSNEPKDRPS-----VEDTLWNLQFAT 756 (769)
Q Consensus 716 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~l~~~~ 756 (769)
...+++ .+.+++.+||+.||++||+ ++|+++|+||..
T Consensus 258 p~~~~~----~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~ 299 (350)
T 1rdq_E 258 PSHFSS----DLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFAT 299 (350)
T ss_dssp CTTCCH----HHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTT
T ss_pred CCCCCH----HHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCC
Confidence 123333 4889999999999999998 999999999864
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-40 Score=350.17 Aligned_cols=267 Identities=19% Similarity=0.246 Sum_probs=200.1
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
++|+..+.||+|+||+||+|+.. +|+.||||+++...... .+.+.+|++++++++||||+++++++.+..
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------- 74 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDK------- 74 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT-------
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCC-------
Confidence 46888999999999999999976 68999999997654322 367889999999999999999999998643
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++||||+++ ++.+.+......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 75 ~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~ 150 (292)
T 3o0g_A 75 KLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARA 150 (292)
T ss_dssp EEEEEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeccccee
Confidence 48999999975 66666654444799999999999999999999999 999999999999999999999999999976
Q ss_pred hhccC--CcceeecCCCcchhhhccCC-CCCCCCeeehhHHHHHHHhCCCCC-CCchhH-HHHhhhhhccc-cccccccc
Q 004195 637 AEARG--KGSAEVSSPAKKTSVLARTE-QDDKSDVYDIGIILIEIIVGRPIT-SENVVV-LVKDLLQVNIG-TDEARKSI 710 (769)
Q Consensus 637 ~~~~~--~~~~~~~~~~~~pe~~~~~~-~~~ksDVwS~Gvil~elltG~~p~-~~~~~~-~~~~~~~~~~~-~~~~~~~~ 710 (769)
..... .....++..|++||.+.+.. ++.++|||||||++|||+||+.|+ ...... ....+...... ....+...
T Consensus 151 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 230 (292)
T 3o0g_A 151 FGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSM 230 (292)
T ss_dssp CCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTG
T ss_pred cCCccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhh
Confidence 53222 12223455678899886655 799999999999999999987664 333222 22222111110 11111000
Q ss_pred ---cC---------ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 711 ---VD---------PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 711 ---~d---------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.+ ........+.....+.+++.+|++.||++|||++|+++|+||...
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 289 (292)
T 3o0g_A 231 TKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289 (292)
T ss_dssp GGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC
T ss_pred cccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcccccC
Confidence 00 000001112233458899999999999999999999999999753
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-41 Score=364.60 Aligned_cols=254 Identities=15% Similarity=0.200 Sum_probs=204.1
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc---CCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS---KKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|...+.||+|+||.||+|+.. +|+.||+|++... .....+.+.+|++++++++|||||+++++|.+..
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~------ 88 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEE------ 88 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS------
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC------
Confidence 46888999999999999999976 6899999999653 2344567899999999999999999999998643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 89 -~~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~ 163 (384)
T 4fr4_A 89 -DMFMVVDLLLGGDLRYHLQQNV-HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAA 163 (384)
T ss_dssp -EEEEEECCCTTEEHHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred -EEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceee
Confidence 4899999999999999998654 699999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccC-CcceeecCCCcchhhhcc---CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccccccc
Q 004195 636 LAEARG-KGSAEVSSPAKKTSVLAR---TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIV 711 (769)
Q Consensus 636 ~~~~~~-~~~~~~~~~~~~pe~~~~---~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (769)
...... .....++..|++||.+.. ..++.++|||||||++|||+||++||..................
T Consensus 164 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~-------- 235 (384)
T 4fr4_A 164 MLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETT-------- 235 (384)
T ss_dssp ECCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHC--------
T ss_pred eccCCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhc--------
Confidence 654332 233445567888998763 45899999999999999999999999643222111111110000
Q ss_pred CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCC-HHHHHHHhHhhh
Q 004195 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRPS-VEDTLWNLQFAT 756 (769)
Q Consensus 712 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~~l~~~~ 756 (769)
.......++ ..+.+++.+||+.||++||+ ++++++|+||..
T Consensus 236 ~~~~p~~~s----~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~ 277 (384)
T 4fr4_A 236 VVTYPSAWS----QEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMND 277 (384)
T ss_dssp CCCCCTTSC----HHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTT
T ss_pred ccCCCCcCC----HHHHHHHHHHhcCCHhHhcccHHHHHcChhhhc
Confidence 011112233 34899999999999999998 999999999864
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-41 Score=361.00 Aligned_cols=256 Identities=18% Similarity=0.210 Sum_probs=193.3
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
..+.|+..+.||+|+||.||+|+.. +++.||||+++... ..+.+.+|++++++++||||++++++|.+..
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------- 121 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPT------- 121 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSS-------
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCC-------
Confidence 4567899999999999999999976 68899999997542 3466889999999999999999999998643
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC---CceeeecCCCC
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE---NFHVKINSYNL 633 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---~~~~kl~DFGl 633 (769)
..++||||+++|+|.+++...+ .+++.++..++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+
T Consensus 122 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~ 197 (349)
T 2w4o_A 122 EISLVLELVTGGELFDRIVEKG-YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGL 197 (349)
T ss_dssp EEEEEECCCCSCBHHHHHTTCS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC-
T ss_pred eEEEEEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCcc
Confidence 4899999999999999998654 689999999999999999999999 9999999999999975 88999999999
Q ss_pred chhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH--HHhhhhhccccccccccc
Q 004195 634 PLLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL--VKDLLQVNIGTDEARKSI 710 (769)
Q Consensus 634 a~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~ 710 (769)
++....... ....++..|++||.+.+..++.++|||||||++|||+||+.||....... ...+......
T Consensus 198 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~-------- 269 (349)
T 2w4o_A 198 SKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYY-------- 269 (349)
T ss_dssp ---------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCC--------
T ss_pred ccccCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCc--------
Confidence 976543322 22344567888999988889999999999999999999999986543221 1221111100
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 711 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
..+......+. .+.+++.+||+.||++|||+.|+++|+|+....
T Consensus 270 ~~~~~~~~~~~----~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~ 313 (349)
T 2w4o_A 270 FISPWWDEVSL----NAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKA 313 (349)
T ss_dssp CCTTTTTTSCH----HHHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTT
T ss_pred cCCchhhhCCH----HHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence 01111122333 488999999999999999999999999987543
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-41 Score=369.10 Aligned_cols=261 Identities=17% Similarity=0.256 Sum_probs=209.3
Q ss_pred HHHHHHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc---CCCChhHHHHHHHHHhhccCCceeeEeeeeec
Q 004195 472 LDELKEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS---KKSSPHMYTYHIELISKLRHSNLVSALGHCLD 547 (769)
Q Consensus 472 ~~el~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~ 547 (769)
+.++....++|+..+.||+|+||+||+|+.. +++.||+|+++.. .....+.+.+|+.+++.++|||||+++++|.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 3455566788999999999999999999976 6899999999753 23334568899999999999999999999986
Q ss_pred cCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceee
Q 004195 548 FSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVK 627 (769)
Q Consensus 548 ~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~k 627 (769)
.. ..|+|||||++|+|.++++.. .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+|
T Consensus 141 ~~-------~~~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ik 208 (410)
T 3v8s_A 141 DR-------YLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLK 208 (410)
T ss_dssp SS-------EEEEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEE
T ss_pred CC-------EEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEE
Confidence 43 489999999999999999754 589999999999999999999999 999999999999999999999
Q ss_pred ecCCCCchhhhccC---CcceeecCCCcchhhhccCC----CCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhh
Q 004195 628 INSYNLPLLAEARG---KGSAEVSSPAKKTSVLARTE----QDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQV 699 (769)
Q Consensus 628 l~DFGla~~~~~~~---~~~~~~~~~~~~pe~~~~~~----~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~ 699 (769)
|+|||+++...... .....++..|++||.+.... ++.++|||||||++|||+||++||....... ...+...
T Consensus 209 L~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~ 288 (410)
T 3v8s_A 209 LADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNH 288 (410)
T ss_dssp ECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTH
T ss_pred EeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhc
Confidence 99999997654322 12344566788899887655 7899999999999999999999997654332 2222211
Q ss_pred ccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCC--CCCHHHHHHHhHhhh
Q 004195 700 NIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKD--RPSVEDTLWNLQFAT 756 (769)
Q Consensus 700 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~l~~~~ 756 (769)
.. ...-|. ....++ ++.+++.+|++.+|++ ||+++||++|+||..
T Consensus 289 ~~-------~~~~p~-~~~~s~----~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~ 335 (410)
T 3v8s_A 289 KN-------SLTFPD-DNDISK----EAKNLICAFLTDREVRLGRNGVEEIKRHLFFKN 335 (410)
T ss_dssp HH-------HCCCCT-TCCCCH----HHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCC
T ss_pred cc-------cccCCC-cccccH----HHHHHHHHHccChhhhCCCCCHHHHhcCccccC
Confidence 10 000010 112333 3889999999999988 999999999999975
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-41 Score=349.53 Aligned_cols=254 Identities=17% Similarity=0.247 Sum_probs=203.3
Q ss_pred hcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
.++|...+.||+|+||.||+|+..++..||||+++... ...+++.+|++++++++||||+++++++.+... .
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~-------~ 94 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRP-------I 94 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS-------E
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCC-------e
Confidence 34678889999999999999999888899999998543 345789999999999999999999999976443 8
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
++||||+++|+|.+++......+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 95 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 171 (283)
T 3gen_A 95 FIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 171 (283)
T ss_dssp EEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBC
T ss_pred EEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccc
Confidence 999999999999999986555799999999999999999999999 99999999999999999999999999997543
Q ss_pred ccC---CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCcc
Q 004195 639 ARG---KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 639 ~~~---~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
... .....++..|++||.+....++.++||||||+++|||+| |+.||...........+.... .+.
T Consensus 172 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~----------~~~ 241 (283)
T 3gen_A 172 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL----------RLY 241 (283)
T ss_dssp CHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTC----------CCC
T ss_pred ccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhccc----------CCC
Confidence 221 111122335788999888889999999999999999999 999997654433222221110 111
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.....++ .+.+++.+||+.||++|||++|++++++....
T Consensus 242 ~~~~~~~----~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~ 280 (283)
T 3gen_A 242 RPHLASE----KVYTIMYSCWHEKADERPTFKILLSNILDVMD 280 (283)
T ss_dssp CCTTCCH----HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCcCCH----HHHHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence 1122233 48899999999999999999999999987643
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-41 Score=371.64 Aligned_cols=265 Identities=15% Similarity=0.194 Sum_probs=210.0
Q ss_pred cCHHHHHHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeee
Q 004195 470 FTLDELKEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHC 545 (769)
Q Consensus 470 ~~~~el~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~ 545 (769)
+++.+.....++|+..+.||+|+||.||+|+.+ +|+.||||+++... ....+.+.+|+.++.+++||||+++++++
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 445666667889999999999999999999976 79999999997531 12234588999999999999999999999
Q ss_pred eccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCce
Q 004195 546 LDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH 625 (769)
Q Consensus 546 ~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~ 625 (769)
.+.+ ..|+||||+++|+|.+++.+.+..+++..+..++.||+.||+|||+. +|+||||||+|||++.+++
T Consensus 131 ~~~~-------~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~ 200 (412)
T 2vd5_A 131 QDEN-------YLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGH 200 (412)
T ss_dssp ECSS-------EEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSC
T ss_pred eeCC-------EEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCC
Confidence 8643 48999999999999999986545799999999999999999999998 9999999999999999999
Q ss_pred eeecCCCCchhhhccCC---cceeecCCCcchhhhc-------cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HH
Q 004195 626 VKINSYNLPLLAEARGK---GSAEVSSPAKKTSVLA-------RTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VK 694 (769)
Q Consensus 626 ~kl~DFGla~~~~~~~~---~~~~~~~~~~~pe~~~-------~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~ 694 (769)
+||+|||+++....... ....++..|++||.+. ...++.++|||||||++|||+||++||....... ..
T Consensus 201 vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~ 280 (412)
T 2vd5_A 201 IRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYG 280 (412)
T ss_dssp EEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH
T ss_pred EEEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHH
Confidence 99999999976543322 1234566788899876 3568999999999999999999999997654332 22
Q ss_pred hhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCC---CCHHHHHHHhHhhh
Q 004195 695 DLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDR---PSVEDTLWNLQFAT 756 (769)
Q Consensus 695 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Ps~~evl~~l~~~~ 756 (769)
.+..... ...-|......++ ++.+++.+||. +|++| |+++|+++|+||..
T Consensus 281 ~i~~~~~-------~~~~p~~~~~~s~----~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~ 333 (412)
T 2vd5_A 281 KIVHYKE-------HLSLPLVDEGVPE----EARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFG 333 (412)
T ss_dssp HHHTHHH-------HCCCC----CCCH----HHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTT
T ss_pred HHHhccc-------CcCCCccccCCCH----HHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCC
Confidence 2221100 0001111123333 48999999999 99998 69999999999965
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-40 Score=345.77 Aligned_cols=260 Identities=16% Similarity=0.149 Sum_probs=208.6
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
.++|...+.||+|+||.||+|+.. ++..||+|++........+.+.+|++++++++||||+++++++.+.. .
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-------~ 80 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNT-------D 80 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-------E
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCC-------e
Confidence 456888999999999999999976 58899999998766666788999999999999999999999998643 4
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceee---CCCceeeecCCCCc
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLL---DENFHVKINSYNLP 634 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl---d~~~~~kl~DFGla 634 (769)
.++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++
T Consensus 81 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~ 156 (277)
T 3f3z_A 81 IYLVMELCTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLA 156 (277)
T ss_dssp EEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEEeccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccc
Confidence 899999999999999987543 689999999999999999999999 99999999999999 78899999999998
Q ss_pred hhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCc
Q 004195 635 LLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 635 ~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
........ ....++..|++||.+. ..++.++||||||+++|||+||+.||...........+...... ..+
T Consensus 157 ~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-------~~~ 228 (277)
T 3f3z_A 157 ARFKPGKMMRTKVGTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFT-------FPE 228 (277)
T ss_dssp EECCTTSCBCCCCSCTTTCCHHHHT-TCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC-------CCH
T ss_pred eeccCccchhccCCCCCccChHHhc-ccCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC-------CCc
Confidence 65543322 2334455678888775 45999999999999999999999999765433322211111000 000
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhccc
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQGL 761 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~~ 761 (769)
.....++ ..+.+++.+|++.||++|||+.|+++|+||.......
T Consensus 229 ~~~~~~~----~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~~ 272 (277)
T 3f3z_A 229 KDWLNVS----PQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSSS 272 (277)
T ss_dssp HHHTTSC----HHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHHHCCS
T ss_pred hhhhcCC----HHHHHHHHHHccCChhhCcCHHHHhcCHHHhcccccc
Confidence 0011223 3488999999999999999999999999998765543
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-41 Score=369.16 Aligned_cols=255 Identities=19% Similarity=0.321 Sum_probs=205.3
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
.++|...+.||+|+||.||+|++. +++.||||.++.... ...+.+.+|++++++++|||||+++++|.+...
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~------ 186 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQP------ 186 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSS------
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCC------
Confidence 346778899999999999999986 799999999975421 122468899999999999999999999976433
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
.++||||+++|+|.++++..+..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 187 -~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~ 262 (377)
T 3cbl_A 187 -IYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSRE 262 (377)
T ss_dssp -CEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred -cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCcee
Confidence 7999999999999999986555699999999999999999999999 999999999999999999999999999865
Q ss_pred hhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhcccccccccccc
Q 004195 637 AEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIV 711 (769)
Q Consensus 637 ~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (769)
...... .....+..|++||.+....++.++|||||||++|||+| |+.||...........+....
T Consensus 263 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~---------- 332 (377)
T 3cbl_A 263 EADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGG---------- 332 (377)
T ss_dssp CTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTC----------
T ss_pred cCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC----------
Confidence 432211 11123345888999888889999999999999999999 999997655443333222111
Q ss_pred CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 712 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.......+++ .+.+++.+||+.||++|||++++++.+..+..
T Consensus 333 ~~~~~~~~~~----~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 333 RLPCPELCPD----AVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCH----HHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 0111123343 48899999999999999999999999987654
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-40 Score=351.66 Aligned_cols=270 Identities=14% Similarity=0.172 Sum_probs=208.0
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC-CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK-KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|...+.||+|+||+||+|+.. +|+.||||+++... ....+.+.+|++++++++||||+++++++.+... ..
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-----~~ 83 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTT-----RH 83 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTT-----CC
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCC-----ce
Confidence 46788899999999999999976 59999999997543 3345678899999999999999999999875432 24
Q ss_pred EEEEEeccCCCchhhhhcCCC--CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceee----CCCceeeecCC
Q 004195 558 IYLIFEYAPNETLRSFISGPG--YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLL----DENFHVKINSY 631 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl----d~~~~~kl~DF 631 (769)
.++||||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||++ +.++.+||+||
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Df 160 (319)
T 4euu_A 84 KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160 (319)
T ss_dssp EEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCC
T ss_pred EEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccC
Confidence 799999999999999998533 2389999999999999999999999 99999999999999 88889999999
Q ss_pred CCchhhhccCC-cceeecCCCcchhhhc--------cCCCCCCCCeeehhHHHHHHHhCCCCCCCch-----hHHHHhhh
Q 004195 632 NLPLLAEARGK-GSAEVSSPAKKTSVLA--------RTEQDDKSDVYDIGIILIEIIVGRPITSENV-----VVLVKDLL 697 (769)
Q Consensus 632 Gla~~~~~~~~-~~~~~~~~~~~pe~~~--------~~~~~~ksDVwS~Gvil~elltG~~p~~~~~-----~~~~~~~~ 697 (769)
|+++....... ....++..|++||.+. ...++.++|||||||++|||+||+.||.... ......+.
T Consensus 161 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 240 (319)
T 4euu_A 161 GAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII 240 (319)
T ss_dssp TTCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHH
T ss_pred CCceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHh
Confidence 99976543332 2233455677888775 4678999999999999999999999986322 11122221
Q ss_pred hhcccc-ccccccc------c--CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 698 QVNIGT-DEARKSI------V--DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 698 ~~~~~~-~~~~~~~------~--d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
...... ....... . +.......+......+.+++.+||+.||++|||++|+++|+.....
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~ 309 (319)
T 4euu_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (319)
T ss_dssp HHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC
T ss_pred cCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhh
Confidence 111000 0000000 0 0111124556778889999999999999999999999999986543
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-41 Score=363.42 Aligned_cols=258 Identities=21% Similarity=0.219 Sum_probs=196.4
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
.++|...+.||+|+||+||+|+.. +|+.||||++.... ...+.+.+|+.++++++|||||++++++.+.. .
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-------~ 90 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPT-------H 90 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSS-------E
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCC-------E
Confidence 457888999999999999999976 79999999997543 33467899999999999999999999998643 4
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCce--eeecCCCCch
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH--VKINSYNLPL 635 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~--~kl~DFGla~ 635 (769)
.++||||+++|+|.+++...+ .+++..+..++.|+++||+|||+. +|+||||||+||+++.++. +||+|||+++
T Consensus 91 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~ 166 (361)
T 3uc3_A 91 LAIIMEYASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSK 166 (361)
T ss_dssp EEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC-
T ss_pred EEEEEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccc
Confidence 899999999999999997543 689999999999999999999998 9999999999999987765 9999999986
Q ss_pred hhhcc-CCcceeecCCCcchhhhccCCCCCC-CCeeehhHHHHHHHhCCCCCCCchh-HHHHhhhhhccccccccccccC
Q 004195 636 LAEAR-GKGSAEVSSPAKKTSVLARTEQDDK-SDVYDIGIILIEIIVGRPITSENVV-VLVKDLLQVNIGTDEARKSIVD 712 (769)
Q Consensus 636 ~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~k-sDVwS~Gvil~elltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~d 712 (769)
..... ......++..|++||.+.+..++.+ +|||||||++|||++|++||..... ......++....... ..
T Consensus 167 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~---~~-- 241 (361)
T 3uc3_A 167 SSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKY---SI-- 241 (361)
T ss_dssp --------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCC---CC--
T ss_pred cccccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCC---CC--
Confidence 43222 2233345667889999888777665 8999999999999999999975332 111111111100000 00
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 713 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
| .....++ .+.+++.+||+.||++|||+.|+++|+||....
T Consensus 242 ~-~~~~~s~----~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~ 282 (361)
T 3uc3_A 242 P-DDIRISP----ECCHLISRIFVADPATRISIPEIKTHSWFLKNL 282 (361)
T ss_dssp C-TTSCCCH----HHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTTC
T ss_pred C-CcCCCCH----HHHHHHHHHccCChhHCcCHHHHHhCcchhcCC
Confidence 0 0012233 488999999999999999999999999996543
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-40 Score=347.71 Aligned_cols=254 Identities=16% Similarity=0.243 Sum_probs=198.7
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC-CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK-KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|...+.||+|+||.||+|+.. +|..||+|++.... ....+.+.+|++++++++||||+++++++.+.. .
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-------~ 94 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYH-------N 94 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-------E
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCC-------e
Confidence 46888899999999999999975 68999999997654 334578999999999999999999999997633 4
Q ss_pred EEEEEeccCCCchhhhhcC---CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceee---CCCceeeecCC
Q 004195 558 IYLIFEYAPNETLRSFISG---PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLL---DENFHVKINSY 631 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl---d~~~~~kl~DF 631 (769)
.++||||+++|+|.+++.. ....+++..+..++.|+++||+|||+. +|+||||||+||++ +.++.+||+||
T Consensus 95 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Df 171 (285)
T 3is5_A 95 MYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDF 171 (285)
T ss_dssp EEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCC
T ss_pred EEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEee
Confidence 8999999999999998852 234699999999999999999999999 99999999999999 45688999999
Q ss_pred CCchhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccc
Q 004195 632 NLPLLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSI 710 (769)
Q Consensus 632 Gla~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (769)
|+++....... ....++..|++||.+ ...++.++|||||||++|||++|+.||..................
T Consensus 172 g~a~~~~~~~~~~~~~~t~~y~aPE~~-~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~------- 243 (285)
T 3is5_A 172 GLAELFKSDEHSTNAAGTALYMAPEVF-KRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPN------- 243 (285)
T ss_dssp CCCCC----------CTTGGGCCHHHH-TTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC-------
T ss_pred ecceecCCcccCcCcccccCcCChHHh-ccCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcc-------
Confidence 99976543322 223344567788876 467899999999999999999999999875544332222111000
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 711 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
. +......++ ++.+++.+||+.||++|||+.|+++|+||.+
T Consensus 244 ~-~~~~~~~~~----~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~ 284 (285)
T 3is5_A 244 Y-AVECRPLTP----QAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ 284 (285)
T ss_dssp C-CC--CCCCH----HHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred c-ccccCcCCH----HHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence 0 000011233 4889999999999999999999999999863
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-40 Score=369.20 Aligned_cols=253 Identities=19% Similarity=0.246 Sum_probs=206.7
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|...+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+++++.++||||+++++++.+.+
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~------ 89 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPS------ 89 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSS------
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC------
Confidence 46788899999999999999976 79999999997542 234567899999999999999999999998643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+++|+|.+++...+ .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 90 -~~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~ 164 (476)
T 2y94_A 90 -DIFMVMEYVSGGELFDYICKNG-RLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSN 164 (476)
T ss_dssp -EEEEEEECCSSEEHHHHTTSSS-SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred -EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchh
Confidence 4899999999999999998654 699999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccC-CcceeecCCCcchhhhccCCC-CCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCc
Q 004195 636 LAEARG-KGSAEVSSPAKKTSVLARTEQ-DDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 636 ~~~~~~-~~~~~~~~~~~~pe~~~~~~~-~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
...... .....++..|++||.+.+..+ +.++||||+||++|||++|+.||.+.........+.... .
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~-----------~ 233 (476)
T 2y94_A 165 MMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGI-----------F 233 (476)
T ss_dssp ECCTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTC-----------C
T ss_pred hccccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCC-----------c
Confidence 654332 223345667888998877665 689999999999999999999998654332222111100 0
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
......++ .+.+++.+||+.||++|||++|+++|+|+....
T Consensus 234 ~~p~~~s~----~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~~ 274 (476)
T 2y94_A 234 YTPQYLNP----SVISLLKHMLQVDPMKRATIKDIREHEWFKQDL 274 (476)
T ss_dssp CCCTTCCH----HHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTTC
T ss_pred CCCccCCH----HHHHHHHHHcCCCchhCcCHHHHHhCHHhhhcC
Confidence 01112333 488999999999999999999999999998654
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-40 Score=351.97 Aligned_cols=256 Identities=15% Similarity=0.192 Sum_probs=206.4
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC------ChhHHHHHHHHHhhccCCceeeEeeeeeccCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS------SPHMYTYHIELISKLRHSNLVSALGHCLDFSLD 551 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~------~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~ 551 (769)
.++|...+.||+|+||.||+|+.. +|+.||||.++..... ..+.+.+|++++++++||||+++++++.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 88 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRT-- 88 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCC--
Confidence 456888999999999999999976 6999999999765322 2567999999999999999999999997643
Q ss_pred CCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc----eee
Q 004195 552 DPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF----HVK 627 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~----~~k 627 (769)
..++||||+++++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++ .+|
T Consensus 89 -----~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~k 159 (321)
T 2a2a_A 89 -----DVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIK 159 (321)
T ss_dssp -----EEEEEECCCCSCBHHHHHHTCS-CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEE
T ss_pred -----EEEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEE
Confidence 4899999999999999998654 689999999999999999999999 999999999999999887 799
Q ss_pred ecCCCCchhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccc
Q 004195 628 INSYNLPLLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEA 706 (769)
Q Consensus 628 l~DFGla~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (769)
|+|||+++....... ....++..|++||...+..++.++|||||||++|||+||+.||...........+....
T Consensus 160 l~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~----- 234 (321)
T 2a2a_A 160 LIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVS----- 234 (321)
T ss_dssp ECCCTTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTC-----
T ss_pred EccCccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcc-----
Confidence 999999976543322 22334556788999888889999999999999999999999997654332222111100
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 707 RKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 707 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
...++......++ .+.+++.+||+.||++|||++|+++|+|+..
T Consensus 235 --~~~~~~~~~~~~~----~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~ 278 (321)
T 2a2a_A 235 --YDFDEEFFSHTSE----LAKDFIRKLLVKETRKRLTIQEALRHPWITP 278 (321)
T ss_dssp --CCCCHHHHTTCCH----HHHHHHHTTSCSSTTTSCCHHHHHHSTTTSC
T ss_pred --cccChhhhcccCH----HHHHHHHHHcCCChhhCcCHHHHhcCccccC
Confidence 0011111223333 4889999999999999999999999999863
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-40 Score=357.08 Aligned_cols=253 Identities=18% Similarity=0.292 Sum_probs=199.0
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCc----EEEEEEccccC-CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGT----LVAIRSLKMSK-KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~----~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
++|+..+.||+|+||+||+|++. +|+ .||+|.++... ....+.+.+|+.++++++||||++++++|.+..
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---- 90 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST---- 90 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS----
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC----
Confidence 45888899999999999999964 444 36888886443 344578999999999999999999999998632
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
.++|+||+++|+|.+++......+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 91 ----~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~ 163 (327)
T 3poz_A 91 ----VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGL 163 (327)
T ss_dssp ----EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTH
T ss_pred ----eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcc
Confidence 6899999999999999986556799999999999999999999999 999999999999999999999999999
Q ss_pred chhhhccCCcc----eeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccc
Q 004195 634 PLLAEARGKGS----AEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARK 708 (769)
Q Consensus 634 a~~~~~~~~~~----~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (769)
++......... ..++..|++||.+.+..++.++|||||||++|||+| |+.||...........+.....
T Consensus 164 a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~------ 237 (327)
T 3poz_A 164 AKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER------ 237 (327)
T ss_dssp HHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCC------
T ss_pred eeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCC------
Confidence 97664332211 112335788999988999999999999999999999 9999976544333332221110
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
......++ ..+.+++.+||+.||++||++.|+++++.....
T Consensus 238 ----~~~~~~~~----~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 238 ----LPQPPICT----IDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp ----CCCCTTBC----HHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred ----CCCCccCC----HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 11112223 348899999999999999999999999986543
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-40 Score=353.26 Aligned_cols=256 Identities=16% Similarity=0.206 Sum_probs=196.0
Q ss_pred cCCCC-cCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDS-SSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~-~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
+.|.. .+.||+|+||.||+|+.. +|+.||||++........+.+.+|++++.++ +||||+++++++.+.+
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~------- 84 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEED------- 84 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT-------
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC-------
Confidence 45666 478999999999999965 7999999999876555667899999999985 7999999999998643
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCce---eeecCCCC
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH---VKINSYNL 633 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~---~kl~DFGl 633 (769)
..++||||+++|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++. +||+|||+
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~ 160 (316)
T 2ac3_A 85 RFYLVFEKMRGGSILSHIHKRR-HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDL 160 (316)
T ss_dssp EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTC
T ss_pred EEEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccC
Confidence 4899999999999999997543 689999999999999999999999 9999999999999988776 99999999
Q ss_pred chhhhccC---------CcceeecCCCcchhhhcc-----CCCCCCCCeeehhHHHHHHHhCCCCCCCchhH--------
Q 004195 634 PLLAEARG---------KGSAEVSSPAKKTSVLAR-----TEQDDKSDVYDIGIILIEIIVGRPITSENVVV-------- 691 (769)
Q Consensus 634 a~~~~~~~---------~~~~~~~~~~~~pe~~~~-----~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-------- 691 (769)
++...... .....++..|++||.+.. ..++.++|||||||++|||+||++||......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~ 240 (316)
T 2ac3_A 161 GSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGE 240 (316)
T ss_dssp CC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----
T ss_pred ccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccc
Confidence 86543211 111224556788998764 45899999999999999999999999753211
Q ss_pred --------HHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 692 --------LVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 692 --------~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
....+...... +........+ ..+.+++.+||+.||++|||++|+++|+|+....
T Consensus 241 ~~~~~~~~~~~~i~~~~~~--------~~~~~~~~~~----~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~ 303 (316)
T 2ac3_A 241 ACPACQNMLFESIQEGKYE--------FPDKDWAHIS----CAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCA 303 (316)
T ss_dssp CCHHHHHHHHHHHHHCCCC--------CCHHHHTTSC----HHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC---
T ss_pred cchhHHHHHHHHHhccCcc--------cCchhcccCC----HHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCC
Confidence 01110000000 0000011222 3488999999999999999999999999997543
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-40 Score=354.07 Aligned_cols=250 Identities=16% Similarity=0.246 Sum_probs=195.9
Q ss_pred cCCCCcCccccCCceeEEEEEe----CCCcEEEEEEccccC----CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKL----TDGTLVAIRSLKMSK----KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLD 551 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~----~~g~~vAvK~~~~~~----~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~ 551 (769)
++|+..+.||+|+||.||+|+. .+|+.||+|+++... ......+.+|++++++++||||+++++++.+.+.
T Consensus 17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~- 95 (327)
T 3a62_A 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK- 95 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC-
T ss_pred HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE-
Confidence 5688899999999999999996 468999999997542 1233567889999999999999999999986443
Q ss_pred CCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCC
Q 004195 552 DPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSY 631 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DF 631 (769)
.++||||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 96 ------~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Df 165 (327)
T 3a62_A 96 ------LYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDF 165 (327)
T ss_dssp ------EEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCC
T ss_pred ------EEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeC
Confidence 899999999999999997543 689999999999999999999999 9999999999999999999999999
Q ss_pred CCchhhhccC--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHH-Hhhhhhccccccccc
Q 004195 632 NLPLLAEARG--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLV-KDLLQVNIGTDEARK 708 (769)
Q Consensus 632 Gla~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~ 708 (769)
|+++...... .....++..|++||.+.+..++.++|||||||++|||++|+.||........ ..+....
T Consensus 166 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~-------- 237 (327)
T 3a62_A 166 GLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCK-------- 237 (327)
T ss_dssp SCC----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTC--------
T ss_pred CcccccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCC--------
Confidence 9986543221 1223345678899999888899999999999999999999999976543322 2221111
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCC-----CHHHHHHHhHhhh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRP-----SVEDTLWNLQFAT 756 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~~~~ 756 (769)
..+....++ .+.+++.+||+.||++|| +++|+++|+||..
T Consensus 238 ----~~~p~~~~~----~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~ 282 (327)
T 3a62_A 238 ----LNLPPYLTQ----EARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRH 282 (327)
T ss_dssp ----CCCCTTSCH----HHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSS
T ss_pred ----CCCCCCCCH----HHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccC
Confidence 111122333 488999999999999999 8999999999864
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-41 Score=358.90 Aligned_cols=274 Identities=16% Similarity=0.238 Sum_probs=204.0
Q ss_pred hcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
.++|+..+.||+|+||+||+|+.. ++.||||++.... .....+.+|+.++++++|||||++++++.+... .....
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~---~~~~~ 97 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTS---VDVDL 97 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECS---SSEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCC---CCceE
Confidence 356888999999999999999975 7899999997542 223456778999999999999999999986432 13457
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCC-------CCCccccCccccceeeCCCceeeecCC
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGI-------VPGVFSNNLKITDVLLDENFHVKINSY 631 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-------~~~ivHrDlKp~NILld~~~~~kl~DF 631 (769)
++||||+++|+|.++++.. .++|..+..++.|+++||+|||+.+ .++|+||||||+|||++.++.+||+||
T Consensus 98 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DF 175 (322)
T 3soc_A 98 WLITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADF 175 (322)
T ss_dssp EEEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCC
T ss_pred EEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccC
Confidence 9999999999999999754 4899999999999999999999862 348999999999999999999999999
Q ss_pred CCchhhhccCC----cceeecCCCcchhhhcc-----CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhh--c
Q 004195 632 NLPLLAEARGK----GSAEVSSPAKKTSVLAR-----TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQV--N 700 (769)
Q Consensus 632 Gla~~~~~~~~----~~~~~~~~~~~pe~~~~-----~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~--~ 700 (769)
|+++....... ....++..|++||.+.+ ..++.++|||||||++|||+||++||..........+... .
T Consensus 176 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 255 (322)
T 3soc_A 176 GLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQ 255 (322)
T ss_dssp TTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCS
T ss_pred CcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhcc
Confidence 99965533221 12334566788998765 3456789999999999999999999865321100000000 0
Q ss_pred ccccccc-----ccccCccccCC-CCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 701 IGTDEAR-----KSIVDPAVMNE-CSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 701 ~~~~~~~-----~~~~d~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
....... .....|.+... .......++.+++.+||+.||++|||+.||++.++...+..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~~ 320 (322)
T 3soc_A 256 HPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLT 320 (322)
T ss_dssp SCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 0000000 00111111111 11245567999999999999999999999999999876654
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-40 Score=358.11 Aligned_cols=251 Identities=17% Similarity=0.226 Sum_probs=205.2
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc---CCCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS---KKSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~ 553 (769)
.++|+..+.||+|+||.||+|+.. +|+.||||+++.. .....+.+.+|..++..+ +||||+++++++.+.+
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~---- 94 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD---- 94 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSS----
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCC----
Confidence 457889999999999999999976 5889999999754 234456788999999988 7999999999997643
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
..|+||||+++|+|.+++...+ .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 95 ---~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~ 167 (353)
T 2i0e_A 95 ---RLYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGM 167 (353)
T ss_dssp ---EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred ---EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCc
Confidence 4899999999999999998543 689999999999999999999999 999999999999999999999999999
Q ss_pred chhhhcc--CCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHH-hhhhhccccccccccc
Q 004195 634 PLLAEAR--GKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVK-DLLQVNIGTDEARKSI 710 (769)
Q Consensus 634 a~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~ 710 (769)
++..... ......++..|++||.+.+..++.++|||||||++|||++|++||......... .+....
T Consensus 168 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~---------- 237 (353)
T 2i0e_A 168 CKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN---------- 237 (353)
T ss_dssp CBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC----------
T ss_pred ccccccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC----------
Confidence 9753221 222334556788999998889999999999999999999999999765433322 222110
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCC-----HHHHHHHhHhhh
Q 004195 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPS-----VEDTLWNLQFAT 756 (769)
Q Consensus 711 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~l~~~~ 756 (769)
..+....++ ++.+++.+||+.||++||+ ++|+++|+||..
T Consensus 238 --~~~p~~~s~----~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~ 282 (353)
T 2i0e_A 238 --VAYPKSMSK----EAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY 282 (353)
T ss_dssp --CCCCTTSCH----HHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTT
T ss_pred --CCCCCCCCH----HHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccC
Confidence 111122333 4889999999999999994 699999999864
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-41 Score=357.65 Aligned_cols=249 Identities=18% Similarity=0.207 Sum_probs=194.0
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC--hhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS--PHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|+..+.||+|+||+||+|+.. +|+.||||++....... ...+.+|+..+.++ +|||||+++++|.+..
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~------ 130 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG------ 130 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT------
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCC------
Confidence 57999999999999999999976 79999999987543222 23455666666655 8999999999998643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+ +++|.+++...+..++|..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 131 -~~~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~ 205 (311)
T 3p1a_A 131 -ILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLV 205 (311)
T ss_dssp -EEEEEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCE
T ss_pred -EEEEEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeee
Confidence 489999999 6799998875555799999999999999999999998 99999999999999999999999999986
Q ss_pred hhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCcc
Q 004195 636 LAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 636 ~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
....... ....++..|++||.+.+ .++.++|||||||++|||++|..|+..... ...+... ...+.
T Consensus 206 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~--~~~~~~~----------~~~~~ 272 (311)
T 3p1a_A 206 ELGTAGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG--WQQLRQG----------YLPPE 272 (311)
T ss_dssp ECC------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH--HHHHTTT----------CCCHH
T ss_pred ecccCCCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH--HHHHhcc----------CCCcc
Confidence 5533322 22234556788997764 799999999999999999999766554321 1111110 11112
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.....++ ++.+++.+||+.||++|||++|+++|+|+.+
T Consensus 273 ~~~~~~~----~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 310 (311)
T 3p1a_A 273 FTAGLSS----ELRSVLVMMLEPDPKLRATAEALLALPVLRQ 310 (311)
T ss_dssp HHTTSCH----HHHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred cccCCCH----HHHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence 2223333 4899999999999999999999999999853
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-40 Score=360.27 Aligned_cols=281 Identities=17% Similarity=0.274 Sum_probs=209.7
Q ss_pred CHHHHHHHhcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCC-----------hhHHHHHHHHHhhccCCcee
Q 004195 471 TLDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSS-----------PHMYTYHIELISKLRHSNLV 539 (769)
Q Consensus 471 ~~~el~~~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~-----------~~~~~~Ei~~l~~l~H~nIv 539 (769)
...++....++|...+.||+|+||.||+|+..+|+.||||++....... .+.+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 4578888999999999999999999999998889999999997543221 16789999999999999999
Q ss_pred eEeeeeeccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCcccccee
Q 004195 540 SALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVL 619 (769)
Q Consensus 540 ~l~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NIL 619 (769)
++++++..... +.....++||||++ |+|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+
T Consensus 93 ~~~~~~~~~~~--~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl 166 (362)
T 3pg1_A 93 GLRDIFVHFEE--PAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNIL 166 (362)
T ss_dssp CCSEEEEECCT--TTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred ceeeeEEeccC--CCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEE
Confidence 99999875432 23456899999997 689998886666799999999999999999999999 9999999999999
Q ss_pred eCCCceeeecCCCCchhhhccCC-cceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhh
Q 004195 620 LDENFHVKINSYNLPLLAEARGK-GSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDL 696 (769)
Q Consensus 620 ld~~~~~kl~DFGla~~~~~~~~-~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~ 696 (769)
++.++.+||+|||+++....... ....++..|++||.+.+ ..++.++|||||||++|||+||++||....... ...+
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i 246 (362)
T 3pg1_A 167 LADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKI 246 (362)
T ss_dssp ECTTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred EcCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 99999999999999975433322 22334455788998766 678999999999999999999999997654322 2221
Q ss_pred hhhcccccc--c--------cccccCccc---c----CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 697 LQVNIGTDE--A--------RKSIVDPAV---M----NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 697 ~~~~~~~~~--~--------~~~~~d~~~---~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
... ..... . ..+...... . ....+.....+.+++.+||+.||++|||+.|+++|+||....
T Consensus 247 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 324 (362)
T 3pg1_A 247 VEV-VGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLF 324 (362)
T ss_dssp HHH-HCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred HHH-cCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhcc
Confidence 111 10000 0 000000000 0 000111234488999999999999999999999999997653
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-40 Score=346.22 Aligned_cols=254 Identities=19% Similarity=0.267 Sum_probs=207.5
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc---CCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS---KKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|...+.||+|+||.||+|+.. +++.||||++... .....+.+.+|++++++++||||+++++++.+..
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------ 87 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRK------ 87 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS------
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCC------
Confidence 56888999999999999999976 6889999999643 2334567999999999999999999999997633
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+++|+|.+++...+ .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 88 -~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~ 162 (284)
T 2vgo_A 88 -RIYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSV 162 (284)
T ss_dssp -EEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred -EEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccc
Confidence 4899999999999999997543 689999999999999999999998 99999999999999999999999999986
Q ss_pred hhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccc
Q 004195 636 LAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAV 715 (769)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 715 (769)
...........++..|++||.+.+..++.++||||||+++|||++|+.||...........+.. .+..+
T Consensus 163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~-----------~~~~~ 231 (284)
T 2vgo_A 163 HAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVN-----------VDLKF 231 (284)
T ss_dssp ECSSSCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT-----------TCCCC
T ss_pred cCcccccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhc-----------cccCC
Confidence 5543333333455667889998888899999999999999999999999976543322221110 01111
Q ss_pred cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 716 MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 716 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
....++ .+.+++.+|++.||++|||++|+++|+|+.....
T Consensus 232 ~~~~~~----~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~~~ 271 (284)
T 2vgo_A 232 PPFLSD----GSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSR 271 (284)
T ss_dssp CTTSCH----HHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHHCC
T ss_pred CCcCCH----HHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhhcc
Confidence 122333 4889999999999999999999999999986543
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-40 Score=350.98 Aligned_cols=257 Identities=18% Similarity=0.260 Sum_probs=205.3
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
.++|...+.||+|+||.||+|+.. +|+.||+|+++.......+.+.+|++++++++||||+++++++.+.. .
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-------~ 80 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTT-------H 80 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSS-------E
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCC-------E
Confidence 356888999999999999999976 79999999998655445567899999999999999999999997643 4
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceee---CCCceeeecCCCCc
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLL---DENFHVKINSYNLP 634 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl---d~~~~~kl~DFGla 634 (769)
.++||||+++++|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||++ ++++.+||+|||++
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~ 156 (304)
T 2jam_A 81 YYLVMQLVSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLS 156 (304)
T ss_dssp EEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTT
T ss_pred EEEEEEcCCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcc
Confidence 899999999999999987443 689999999999999999999999 99999999999999 78899999999998
Q ss_pred hhhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCcc
Q 004195 635 LLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
+...........++..|++||.+.+..++.++|||||||++|||++|++||...........+..... . ....
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~------~-~~~~ 229 (304)
T 2jam_A 157 KMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYY------E-FESP 229 (304)
T ss_dssp CCCCCBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCC------C-CCTT
T ss_pred eecCCCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC------C-CCcc
Confidence 76544333333455678889998888899999999999999999999999976543332221111100 0 0111
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.....++ .+.+++.+||+.||++|||++|+++|+|+...
T Consensus 230 ~~~~~~~----~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 268 (304)
T 2jam_A 230 FWDDISE----SAKDFICHLLEKDPNERYTCEKALSHPWIDGN 268 (304)
T ss_dssp TTTTSCH----HHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSS
T ss_pred ccccCCH----HHHHHHHHHcCCChhHCcCHHHHhcCccccCC
Confidence 1122333 48899999999999999999999999998754
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-40 Score=356.65 Aligned_cols=270 Identities=20% Similarity=0.320 Sum_probs=201.2
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC-hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS-PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~-~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|...+.||+|+||+||+|+.. +++.||||+++...... ...+.+|++++++++||||+++++++.+...
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~------- 74 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKS------- 74 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSC-------
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCE-------
Confidence 46888999999999999999976 79999999997543222 2345679999999999999999999986443
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.++||||++ |+|.+++...+..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 75 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 150 (324)
T 3mtl_A 75 LTLVFEYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAK 150 (324)
T ss_dssp EEEEEECCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC
T ss_pred EEEEecccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccc
Confidence 899999997 699999886666799999999999999999999999 9999999999999999999999999998654
Q ss_pred hccC--CcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccc--ccccccccC
Q 004195 638 EARG--KGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGT--DEARKSIVD 712 (769)
Q Consensus 638 ~~~~--~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~d 712 (769)
.... .....++..|++||.+.+ ..++.++|||||||++|||+||++||...........+...... ...+.....
T Consensus 151 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 230 (324)
T 3mtl_A 151 SIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILS 230 (324)
T ss_dssp ------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGG
T ss_pred cCCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhc
Confidence 3222 122234556788998765 56899999999999999999999999765543322222111111 111111110
Q ss_pred ---------ccccCC----CCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcc
Q 004195 713 ---------PAVMNE----CSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQG 760 (769)
Q Consensus 713 ---------~~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~ 760 (769)
+..... ..+.....+.+++.+||+.||++|||++|+++|+||....+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~ 291 (324)
T 3mtl_A 231 NEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGER 291 (324)
T ss_dssp CHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCST
T ss_pred chhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcccc
Confidence 000000 001123348899999999999999999999999999865443
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=362.56 Aligned_cols=257 Identities=19% Similarity=0.284 Sum_probs=203.5
Q ss_pred cCCCCcCccccCCceeEEEEEeC------CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT------DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD 552 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~ 552 (769)
++|...+.||+|+||.||+|++. +++.||||+++.... .....+.+|+.++++++|||||++++++.+...
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~-- 148 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP-- 148 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS--
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC--
Confidence 46778899999999999999943 467899999974322 223568899999999999999999999976443
Q ss_pred CCcceEEEEEeccCCCchhhhhcCC------CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc--
Q 004195 553 PSISIIYLIFEYAPNETLRSFISGP------GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF-- 624 (769)
Q Consensus 553 ~~~~~~~lV~Ey~~~gsL~~~l~~~------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~-- 624 (769)
.++||||+++|+|.+++... ...+++.+++.++.|+++||+|||+. +|+||||||+|||++.++
T Consensus 149 -----~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~ 220 (367)
T 3l9p_A 149 -----RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPG 220 (367)
T ss_dssp -----CEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTT
T ss_pred -----CEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCC
Confidence 69999999999999999732 13589999999999999999999999 999999999999999554
Q ss_pred -eeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhh
Q 004195 625 -HVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQ 698 (769)
Q Consensus 625 -~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~ 698 (769)
.+||+|||+++....... ....++..|++||.+.+..++.++|||||||++|||+| |++||...........+.
T Consensus 221 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~ 300 (367)
T 3l9p_A 221 RVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT 300 (367)
T ss_dssp CCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH
T ss_pred ceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 599999999975533221 11223345788999888899999999999999999998 999997765443333222
Q ss_pred hccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcc
Q 004195 699 VNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQG 760 (769)
Q Consensus 699 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~ 760 (769)
... .+.....+++ .+.+++.+||+.||++|||+.||++++++..+..+
T Consensus 301 ~~~----------~~~~~~~~~~----~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~ 348 (367)
T 3l9p_A 301 SGG----------RMDPPKNCPG----PVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 348 (367)
T ss_dssp TTC----------CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred cCC----------CCCCCccCCH----HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChh
Confidence 111 0111123333 48899999999999999999999999998876443
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-41 Score=358.44 Aligned_cols=258 Identities=17% Similarity=0.304 Sum_probs=200.4
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC-ChhHHHHHHHHHhhccCCceeeEeeeeeccCCC-----
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS-SPHMYTYHIELISKLRHSNLVSALGHCLDFSLD----- 551 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~----- 551 (769)
.++|+..+.||+|+||.||+|+.. +|+.||||+++..... ..+.+.+|++++++++|||||+++++|.+....
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 457888999999999999999986 7999999999755432 346799999999999999999999998654320
Q ss_pred ---------------------------------------------CCCcceEEEEEeccCCCchhhhhcCCC--CCCCHH
Q 004195 552 ---------------------------------------------DPSISIIYLIFEYAPNETLRSFISGPG--YKLTWV 584 (769)
Q Consensus 552 ---------------------------------------------~~~~~~~~lV~Ey~~~gsL~~~l~~~~--~~l~~~ 584 (769)
.......++|||||++|+|.+++.... ...++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 011234799999999999999998543 345777
Q ss_pred HHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhccC--------------CcceeecCC
Q 004195 585 QRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARG--------------KGSAEVSSP 650 (769)
Q Consensus 585 ~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~~--------------~~~~~~~~~ 650 (769)
.+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...... .....++..
T Consensus 165 ~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 8999999999999999999 99999999999999999999999999997654321 112235566
Q ss_pred CcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHH
Q 004195 651 AKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMEL 730 (769)
Q Consensus 651 ~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l 730 (769)
|++||.+.+..++.++|||||||++|||++|..|+..... ....... ...+ .........+.++
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~-~~~~~~~-----------~~~~----~~~~~~~~~~~~l 305 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVR-IITDVRN-----------LKFP----LLFTQKYPQEHMM 305 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHH-HHHHHHT-----------TCCC----HHHHHHCHHHHHH
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHH-HHHHhhc-----------cCCC----cccccCChhHHHH
Confidence 7889999888999999999999999999999876532111 1111000 0001 0112233457899
Q ss_pred HHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 731 CLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 731 i~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
+.+||+.||++|||++|+++|+||.
T Consensus 306 i~~~l~~~p~~Rps~~~~l~~~~f~ 330 (332)
T 3qd2_B 306 VQDMLSPSPTERPEATDIIENAIFE 330 (332)
T ss_dssp HHHHHCSSGGGSCCHHHHHHSTTCC
T ss_pred HHHHccCCCCcCCCHHHHhhchhhh
Confidence 9999999999999999999999985
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-40 Score=355.73 Aligned_cols=251 Identities=16% Similarity=0.200 Sum_probs=201.4
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC---hhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS---PHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~---~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~ 554 (769)
++|+..+.||+|+||.||+|+.. +|+.||||+++...... .+.+.+|+.++.++ +|||||++++++.+..
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~----- 83 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES----- 83 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS-----
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCC-----
Confidence 46888999999999999999976 68999999998654333 24578899999988 8999999999997643
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
..++||||+++|+|.+++.+.+ .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 84 --~~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a 157 (345)
T 3a8x_A 84 --RLFFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMC 157 (345)
T ss_dssp --EEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGC
T ss_pred --EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEecccc
Confidence 4899999999999999997543 689999999999999999999999 9999999999999999999999999998
Q ss_pred hhhhcc--CCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchh---------HHHHhhhhhcccc
Q 004195 635 LLAEAR--GKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVV---------VLVKDLLQVNIGT 703 (769)
Q Consensus 635 ~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~---------~~~~~~~~~~~~~ 703 (769)
+..... ......++..|++||.+.+..++.++|||||||++|||++|++||..... ......+.. .
T Consensus 158 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~---~ 234 (345)
T 3a8x_A 158 KEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE---K 234 (345)
T ss_dssp BCSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHH---C
T ss_pred ccccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHc---C
Confidence 753221 22233455678889999888999999999999999999999999964210 111110000 0
Q ss_pred ccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCH------HHHHHHhHhhh
Q 004195 704 DEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSV------EDTLWNLQFAT 756 (769)
Q Consensus 704 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~~l~~~~ 756 (769)
...+....+ ..+.+++.+||+.||++||++ +|+++|+||..
T Consensus 235 --------~~~~p~~~s----~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~ 281 (345)
T 3a8x_A 235 --------QIRIPRSLS----VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 281 (345)
T ss_dssp --------CCCCCTTSC----HHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTT
T ss_pred --------CCCCCCCCC----HHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCC
Confidence 011112233 348899999999999999995 89999999964
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-40 Score=357.91 Aligned_cols=253 Identities=17% Similarity=0.264 Sum_probs=195.9
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCC--hhHHHHHHHHHhhccC--CceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRH--SNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H--~nIv~l~~~~~~~~~~~~~~ 555 (769)
+.|+..+.||+|+||.||+|...+++.||||++....... .+.+.+|++++++++| |||+++++++.+..
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~------ 82 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ------ 82 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS------
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCC------
Confidence 4588899999999999999998889999999997553322 2568899999999976 99999999998643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++|||| .+|+|.+++.... .+++.++..++.|+++||+|||+. +|+||||||+|||++ ++.+||+|||+++
T Consensus 83 -~~~lv~e~-~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~ 155 (343)
T 3dbq_A 83 -YIYMVMEC-GNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIAN 155 (343)
T ss_dssp -EEEEEECC-CSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSC
T ss_pred -EEEEEEeC-CCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeeccccc
Confidence 48999995 5789999998554 689999999999999999999999 999999999999997 6789999999997
Q ss_pred hhhccCC----cceeecCCCcchhhhcc-----------CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhc
Q 004195 636 LAEARGK----GSAEVSSPAKKTSVLAR-----------TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVN 700 (769)
Q Consensus 636 ~~~~~~~----~~~~~~~~~~~pe~~~~-----------~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~ 700 (769)
....... ....++..|++||.+.. ..++.++|||||||++|||++|+.||........ ....
T Consensus 156 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~~-- 232 (343)
T 3dbq_A 156 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS-KLHA-- 232 (343)
T ss_dssp CC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH-HHHH--
T ss_pred ccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHH-HHHH--
Confidence 6543221 22345667888998754 6789999999999999999999999975322111 1000
Q ss_pred cccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 701 IGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 701 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
+.++......+......+.+++.+||+.||++|||+.|+++|+|+..+
T Consensus 233 ---------~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~ 280 (343)
T 3dbq_A 233 ---------IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ 280 (343)
T ss_dssp ---------HHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred ---------HhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCcccccc
Confidence 111111111111112348899999999999999999999999999754
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-40 Score=344.95 Aligned_cols=262 Identities=16% Similarity=0.201 Sum_probs=207.6
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.++|+..+.||+|+||.||+|... +|+.||+|++....... .+.+.+|++++++++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------ 78 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEES------ 78 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS------
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCC------
Confidence 567889999999999999999976 68999999997653322 356889999999999999999999997643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCce---eeecCCC
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH---VKINSYN 632 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~---~kl~DFG 632 (769)
..++||||+++++|.+.+.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||
T Consensus 79 -~~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg 153 (284)
T 3kk8_A 79 -FHYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFG 153 (284)
T ss_dssp -EEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCT
T ss_pred -EEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeece
Confidence 3799999999999998887543 689999999999999999999999 9999999999999976655 9999999
Q ss_pred CchhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccccccc
Q 004195 633 LPLLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIV 711 (769)
Q Consensus 633 la~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (769)
++........ ....++..|++||.+.+..++.++||||||+++|||++|+.||...........+..... ..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~------~~- 226 (284)
T 3kk8_A 154 LAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY------DY- 226 (284)
T ss_dssp TCEECCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC------CC-
T ss_pred eeEEcccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccc------cC-
Confidence 9965543322 223345567889999888899999999999999999999999976544333222211100 00
Q ss_pred CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcccc
Q 004195 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQGLK 762 (769)
Q Consensus 712 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~~~ 762 (769)
.......+++ .+.+++.+||+.||++|||++|+++|+|+....+...
T Consensus 227 ~~~~~~~~~~----~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~~ 273 (284)
T 3kk8_A 227 PSPEWDTVTP----EAKSLIDSMLTVNPKKRITADQALKVPWICNRERVAS 273 (284)
T ss_dssp CTTTTTTSCH----HHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSCCCGGG
T ss_pred CchhhcccCH----HHHHHHHHHcccChhhCCCHHHHhcCccccCChhHHh
Confidence 0111122333 4889999999999999999999999999986544333
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-40 Score=346.19 Aligned_cols=255 Identities=20% Similarity=0.230 Sum_probs=200.0
Q ss_pred CCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 482 FDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
|...+.||+|+||.||+|+.. ++..||+|.+...... ..+.+.+|+.++++++||||+++++++.+... .....
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~---~~~~~ 104 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVK---GKKCI 104 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESS---SCEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccC---CCceE
Confidence 556778999999999999975 6889999999755322 23568899999999999999999999875322 23568
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCC--ccccCccccceeeC-CCceeeecCCCCch
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPG--VFSNNLKITDVLLD-ENFHVKINSYNLPL 635 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDlKp~NILld-~~~~~kl~DFGla~ 635 (769)
++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. + |+||||||+||+++ +++.+||+|||++.
T Consensus 105 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~ 180 (290)
T 1t4h_A 105 VLVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp EEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred EEEEEecCCCCHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCcc
Confidence 99999999999999997543 689999999999999999999998 7 99999999999997 78999999999997
Q ss_pred hhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchh-HHHHhhhhhccccccccccccCcc
Q 004195 636 LAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVV-VLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
...........++..|++||.+. ..++.++|||||||++|||+||+.||..... ......+.... ..+.
T Consensus 181 ~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~---------~~~~ 250 (290)
T 1t4h_A 181 LKRASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGV---------KPAS 250 (290)
T ss_dssp GCCTTSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTC---------CCGG
T ss_pred cccccccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccC---------Cccc
Confidence 65444333334556778888765 5699999999999999999999999975322 11111111100 0111
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.....++ ++.+++.+||+.||++|||++|+++|+||..+
T Consensus 251 ~~~~~~~----~l~~li~~~l~~dp~~Rps~~ell~h~~f~~~ 289 (290)
T 1t4h_A 251 FDKVAIP----EVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE 289 (290)
T ss_dssp GGGCCCH----HHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred cCCCCCH----HHHHHHHHHccCChhhCCCHHHHhhCcccccC
Confidence 1122233 38899999999999999999999999998754
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-41 Score=372.74 Aligned_cols=252 Identities=17% Similarity=0.216 Sum_probs=197.6
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc---CCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS---KKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
.++|+..+.||+|+||.||+|+.. +|+.||||+++.. .......+.+|+.++++++||||++++++|.+.+
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~----- 221 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD----- 221 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETT-----
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCC-----
Confidence 457889999999999999999975 7999999999754 2233456788999999999999999999998643
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhccccc-CCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHT-GIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
..++||||+++|+|.+++.... .+++..+..++.|+++||+|||+ . +|+||||||+|||++.++.+||+|||+
T Consensus 222 --~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~ 295 (446)
T 4ejn_A 222 --RLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGL 295 (446)
T ss_dssp --EEEEEECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCC
T ss_pred --EEEEEEeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCC
Confidence 3899999999999999997543 68999999999999999999998 7 999999999999999999999999999
Q ss_pred chhhhcc--CCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccccccc
Q 004195 634 PLLAEAR--GKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIV 711 (769)
Q Consensus 634 a~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (769)
++..... ......++..|++||.+.+..++.++|||||||++|||+||+.||...........+...
T Consensus 296 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~----------- 364 (446)
T 4ejn_A 296 CKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME----------- 364 (446)
T ss_dssp CCTTCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-----------
T ss_pred ceeccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhC-----------
Confidence 9753222 122334556788999998899999999999999999999999999765543332222110
Q ss_pred CccccCCCCHHHHHHHHHHHHHcCcCCCCCCC-----CHHHHHHHhHhhh
Q 004195 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRP-----SVEDTLWNLQFAT 756 (769)
Q Consensus 712 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~~~~ 756 (769)
...+....++ ++.+++.+||+.||++|| +++|+++|+||..
T Consensus 365 ~~~~p~~~~~----~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~ 410 (446)
T 4ejn_A 365 EIRFPRTLGP----EAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG 410 (446)
T ss_dssp CCCCCTTSCH----HHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred CCCCCccCCH----HHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccC
Confidence 0111122333 488999999999999999 9999999999975
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-40 Score=367.64 Aligned_cols=269 Identities=16% Similarity=0.209 Sum_probs=201.7
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC--CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK--KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.++|+..+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|+.+++.++|||||++++++...... ...
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~-~~~ 139 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL-EEF 139 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCST-TTC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCcc-ccC
Confidence 467888999999999999999965 69999999997542 22245788999999999999999999999754321 123
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
...|+||||+++ +|.+.+.. .+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 140 ~~~~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~ 212 (464)
T 3ttj_A 140 QDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR 212 (464)
T ss_dssp CEEEEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC-
T ss_pred CeEEEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeee
Confidence 568999999975 57666653 489999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccccc--cc-----
Q 004195 636 LAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTD--EA----- 706 (769)
Q Consensus 636 ~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~--~~----- 706 (769)
....... ....++..|++||.+.+..|+.++||||+||++|||++|++||.+..... ...++.. .+.+ +.
T Consensus 213 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~-lg~p~~~~~~~~~ 291 (464)
T 3ttj_A 213 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ-LGTPCPEFMKKLQ 291 (464)
T ss_dssp ----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH-HCSCCHHHHTTSC
T ss_pred ecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh-cCCCCHHHHHHcc
Confidence 6654322 23345667889999999999999999999999999999999997654322 2222111 1100 00
Q ss_pred -----------------cccccCccccCCC---CHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 707 -----------------RKSIVDPAVMNEC---SDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 707 -----------------~~~~~d~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
+...+........ ......++.+|+.+||+.||++|||++|+++|+||..
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~ 361 (464)
T 3ttj_A 292 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 361 (464)
T ss_dssp HHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred hhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhh
Confidence 0000000000000 1122567899999999999999999999999999974
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-40 Score=347.68 Aligned_cols=255 Identities=19% Similarity=0.303 Sum_probs=199.8
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC---hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS---PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~---~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
.++|+..+.||+|+||.||+|+.. +++.||+|.+....... .+.+.+|+.++++++||||+++++++.+.+
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~----- 84 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDD----- 84 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSS-----
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCC-----
Confidence 356888999999999999999965 68999999997554333 256889999999999999999999987643
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
..++||||+++|+|.+++...+ .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 85 --~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~ 158 (294)
T 4eqm_A 85 --CYYLVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIA 158 (294)
T ss_dssp --EEEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSS
T ss_pred --eEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCc
Confidence 4899999999999999998554 689999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhccC---CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHH-hhhhhccccccccccc
Q 004195 635 LLAEARG---KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVK-DLLQVNIGTDEARKSI 710 (769)
Q Consensus 635 ~~~~~~~---~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~ 710 (769)
+...... .....++..|++||.+.+..++.++|||||||++|||+||+.||......... ....... ..
T Consensus 159 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~---~~---- 231 (294)
T 4eqm_A 159 KALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSV---PN---- 231 (294)
T ss_dssp TTC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCC---CC----
T ss_pred cccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccC---CC----
Confidence 7654322 12233566788999998888999999999999999999999999765432211 1111100 00
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCC-CHHHHHHHhHhh
Q 004195 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRP-SVEDTLWNLQFA 755 (769)
Q Consensus 711 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~l~~~ 755 (769)
..+.....+++ .+.+++.+|++.||++|| +++++.+.+...
T Consensus 232 ~~~~~~~~~~~----~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~ 273 (294)
T 4eqm_A 232 VTTDVRKDIPQ----SLSNVILRATEKDKANRYKTIQEMKDDLSSV 273 (294)
T ss_dssp HHHHSCTTSCH----HHHHHHHHHSCSSGGGSCSSHHHHHHHHHTS
T ss_pred cchhcccCCCH----HHHHHHHHHhcCCHhHccccHHHHHHHHHHH
Confidence 00111223333 488999999999999999 777777776654
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-40 Score=346.38 Aligned_cols=256 Identities=17% Similarity=0.285 Sum_probs=187.8
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
.++|...+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+..
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 84 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSN----- 84 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSS-----
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCC-----
Confidence 356888999999999999999974 79999999996432 233467899999999999999999999997643
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
..++||||+++++|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 85 --~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~ 159 (278)
T 3cok_A 85 --YVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLA 159 (278)
T ss_dssp --EEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTC
T ss_pred --eEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecce
Confidence 48999999999999999987656799999999999999999999999 9999999999999999999999999998
Q ss_pred hhhhccC--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccC
Q 004195 635 LLAEARG--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVD 712 (769)
Q Consensus 635 ~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 712 (769)
....... .....++..|++||...+..++.++||||||+++|||+||++||.......... .... .+
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~---~~~~--------~~ 228 (278)
T 3cok_A 160 TQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLN---KVVL--------AD 228 (278)
T ss_dssp EECC----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC--------CCS--------SC
T ss_pred eeccCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHH---HHhh--------cc
Confidence 6543221 112334556788998888889999999999999999999999987543211110 0000 01
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 713 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
......++. ++.+++.+||+.||++|||++|+++|+|+.....
T Consensus 229 ~~~~~~~~~----~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~ 271 (278)
T 3cok_A 229 YEMPSFLSI----EAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNSS 271 (278)
T ss_dssp CCCCTTSCH----HHHHHHHHHSCSSGGGSCCHHHHTTSTTTC----
T ss_pred cCCccccCH----HHHHHHHHHcccCHhhCCCHHHHhcCccccCCCC
Confidence 111122333 4889999999999999999999999999976543
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-40 Score=355.53 Aligned_cols=263 Identities=15% Similarity=0.137 Sum_probs=203.4
Q ss_pred HHHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc-----CCCChhHHHHHHHHHhhccCCceeeEeeeeecc
Q 004195 475 LKEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS-----KKSSPHMYTYHIELISKLRHSNLVSALGHCLDF 548 (769)
Q Consensus 475 l~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~-----~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~ 548 (769)
+....++|...+.||+|+||.||+|+.. +++.||+|++... .....+.+.+|++++++++|||||+++++|.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 4566778999999999999999999975 6889999998653 223346789999999999999999999999764
Q ss_pred CCCCCCcceEEEEEeccCCCchhhhhcCC---------------------------------------CCCCCHHHHHHH
Q 004195 549 SLDDPSISIIYLIFEYAPNETLRSFISGP---------------------------------------GYKLTWVQRIAA 589 (769)
Q Consensus 549 ~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~---------------------------------------~~~l~~~~~~~i 589 (769)
. ..++||||+++|+|.+++... ...+++..+..+
T Consensus 101 ~-------~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 173 (345)
T 3hko_A 101 Q-------YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNI 173 (345)
T ss_dssp S-------EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHH
T ss_pred C-------eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHH
Confidence 3 489999999999999998510 112467788899
Q ss_pred HHHHHHHhcccccCCCCCccccCccccceeeCCCc--eeeecCCCCchhhhccCC------cceeecCCCcchhhhcc--
Q 004195 590 AIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF--HVKINSYNLPLLAEARGK------GSAEVSSPAKKTSVLAR-- 659 (769)
Q Consensus 590 ~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~--~~kl~DFGla~~~~~~~~------~~~~~~~~~~~pe~~~~-- 659 (769)
+.|+++||+|||+. +|+||||||+||+++.++ .+||+|||+++....... ....++..|++||.+.+
T Consensus 174 ~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 250 (345)
T 3hko_A 174 MRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTN 250 (345)
T ss_dssp HHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSS
T ss_pred HHHHHHHHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCC
Confidence 99999999999999 999999999999998776 899999999975433211 22234556788998764
Q ss_pred CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHH-HhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCC
Q 004195 660 TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLV-KDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNE 738 (769)
Q Consensus 660 ~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~d 738 (769)
..++.++|||||||++|||+||+.||........ .......... .......+++ .+.+++.+||+.|
T Consensus 251 ~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~----~~~~li~~~l~~~ 318 (345)
T 3hko_A 251 ESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCF--------ENPNYNVLSP----LARDLLSNLLNRN 318 (345)
T ss_dssp SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCT--------TSGGGGGSCH----HHHHHHHHHSCSC
T ss_pred CCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhccccc--------CCcccccCCH----HHHHHHHHHcCCC
Confidence 6789999999999999999999999976543322 2222111100 0111112333 4889999999999
Q ss_pred CCCCCCHHHHHHHhHhhhhhc
Q 004195 739 PKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 739 P~~RPs~~evl~~l~~~~~~~ 759 (769)
|++|||+.|+++|+|+..-..
T Consensus 319 p~~Rps~~~~l~hp~~~~~~~ 339 (345)
T 3hko_A 319 VDERFDAMRALQHPWISQFSD 339 (345)
T ss_dssp TTTSCCHHHHHHSHHHHTTSS
T ss_pred hhHCCCHHHHhcChhhccChH
Confidence 999999999999999986544
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-40 Score=356.56 Aligned_cols=250 Identities=22% Similarity=0.305 Sum_probs=200.8
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC---hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS---PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~---~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
+.|...+.||+|+||.||+|+.. +|+.||||++....... .+.+.+|++++++++|||||+++++|.+..
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~------ 127 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH------ 127 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT------
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC------
Confidence 45888899999999999999964 79999999997553332 246889999999999999999999998643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||++ |+|.+++......+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 128 -~~~lv~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 202 (348)
T 1u5q_A 128 -TAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSAS 202 (348)
T ss_dssp -EEEEEEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCB
T ss_pred -eEEEEEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCce
Confidence 4899999997 688888864445799999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccCCcceeecCCCcchhhhc---cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhcccccccccccc
Q 004195 636 LAEARGKGSAEVSSPAKKTSVLA---RTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTDEARKSIV 711 (769)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~pe~~~---~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 711 (769)
..... ....++..|++||.+. ...++.++|||||||++|||+||++||....... ........
T Consensus 203 ~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~----------- 269 (348)
T 1u5q_A 203 IMAPA--NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE----------- 269 (348)
T ss_dssp SSSSB--CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC-----------
T ss_pred ecCCC--CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC-----------
Confidence 65432 2233456678899874 4678999999999999999999999987543222 11111110
Q ss_pred Cccc-cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 712 DPAV-MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 712 d~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.+.. ...+++ .+.+++.+||+.||++|||++|+++|+|+...
T Consensus 270 ~~~~~~~~~~~----~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~ 312 (348)
T 1u5q_A 270 SPALQSGHWSE----YFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 312 (348)
T ss_dssp CCCCCCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSC
T ss_pred CCCCCCCCCCH----HHHHHHHHHcccChhhCcCHHHHhhChhhhcc
Confidence 1111 122333 48899999999999999999999999998654
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-41 Score=363.01 Aligned_cols=268 Identities=15% Similarity=0.214 Sum_probs=206.4
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|...+.||+|+||.||+|+.. +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+.. .
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-------~ 105 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-------E 105 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETT-------E
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECC-------E
Confidence 56888999999999999999976 789999999975422 22357889999999999999999999998643 4
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhccccc-CCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHT-GIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
.++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||++..
T Consensus 106 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh~~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 181 (360)
T 3eqc_A 106 ISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 181 (360)
T ss_dssp EEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHHH---CCCCSCCSGGGEEECTTCCEEECCCCCCHH
T ss_pred EEEEEECCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHhC---CEEcCCccHHHEEECCCCCEEEEECCCCcc
Confidence 899999999999999998543 68999999999999999999998 4 799999999999999999999999999976
Q ss_pred hhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccc-----------
Q 004195 637 AEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDE----------- 705 (769)
Q Consensus 637 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~----------- 705 (769)
..........++..|++||.+.+..++.++|||||||++|||+||+.||....................
T Consensus 182 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (360)
T 3eqc_A 182 LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG 261 (360)
T ss_dssp HHHHC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------
T ss_pred cccccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCC
Confidence 654444444556778899999888999999999999999999999999976544332221110000000
Q ss_pred ------------------ccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 706 ------------------ARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 706 ------------------~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
....+...............++.+++.+||+.||++|||++|+++|+|+....
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 332 (360)
T 3eqc_A 262 RPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD 332 (360)
T ss_dssp ------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHHH
T ss_pred CcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcch
Confidence 00000000000000111233588999999999999999999999999997643
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-40 Score=349.28 Aligned_cols=267 Identities=19% Similarity=0.279 Sum_probs=201.1
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
++|+..+.||+|+||+||+|+.. +|+.||||++....... .+.+.+|++++++++||||+++++++.+..
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~------- 75 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKR------- 75 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-------
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCC-------
Confidence 57888999999999999999976 69999999987543222 356789999999999999999999998643
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++||||+++++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 76 ~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 151 (311)
T 4agu_A 76 RLHLVFEYCDHTVLHELDRYQR-GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARL 151 (311)
T ss_dssp EEEEEEECCSEEHHHHHHHTSS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred eEEEEEEeCCCchHHHHHhhhc-CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchh
Confidence 4899999999999999887544 689999999999999999999999 999999999999999999999999999966
Q ss_pred hhccCC--cceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccc---------
Q 004195 637 AEARGK--GSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTD--------- 704 (769)
Q Consensus 637 ~~~~~~--~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~--------- 704 (769)
...... ....++..|++||.+.+ ..++.++|||||||++|||+||++||...........+.......
T Consensus 152 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (311)
T 4agu_A 152 LTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFS 231 (311)
T ss_dssp CC------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHH
T ss_pred ccCcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccc
Confidence 542221 22334556788998765 568999999999999999999999997654332222111111100
Q ss_pred --cccc--cccCccccCC---CCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 705 --EARK--SIVDPAVMNE---CSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 705 --~~~~--~~~d~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.... ...++..... ..+.....+.+++.+||+.||++|||++|+++|+||...
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 291 (311)
T 4agu_A 232 TNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENI 291 (311)
T ss_dssp TCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTC
T ss_pred cccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhc
Confidence 0000 0011110000 001123348899999999999999999999999999754
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-40 Score=342.89 Aligned_cols=251 Identities=21% Similarity=0.326 Sum_probs=191.6
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCC----CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKK----SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~----~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|+..+.||+|+||.||+|+.. |+.||||+++.... ...+.+.+|++++++++||||+++++++.+..
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------ 79 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEP------ 79 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC-------
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC------
Confidence 46788899999999999999975 88999999975432 22467899999999999999999999997643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC--------Cceee
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE--------NFHVK 627 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~--------~~~~k 627 (769)
..++||||+++++|.+++... .+++..+..++.|+++||+|||+....+|+||||||+||+++. ++.+|
T Consensus 80 -~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~k 156 (271)
T 3dtc_A 80 -NLCLVMEFARGGPLNRVLSGK--RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILK 156 (271)
T ss_dssp --CEEEEECCTTEEHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEE
T ss_pred -ceEEEEEcCCCCCHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceE
Confidence 379999999999999999743 6899999999999999999999982222999999999999986 67899
Q ss_pred ecCCCCchhhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccc
Q 004195 628 INSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEAR 707 (769)
Q Consensus 628 l~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (769)
|+|||+++...........++..|++||...+..++.++||||||+++|||+||+.||...............
T Consensus 157 l~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~------- 229 (271)
T 3dtc_A 157 ITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMN------- 229 (271)
T ss_dssp ECCCCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTS-------
T ss_pred EccCCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcC-------
Confidence 9999999765544443444566778899988888999999999999999999999999765433222211110
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 708 KSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 708 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
.........+++ .+.+++.+||+.||++|||+.|+++++.
T Consensus 230 --~~~~~~~~~~~~----~~~~li~~~l~~~p~~Rps~~e~l~~L~ 269 (271)
T 3dtc_A 230 --KLALPIPSTCPE----PFAKLMEDCWNPDPHSRPSFTNILDQLT 269 (271)
T ss_dssp --CCCCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --CCCCCCCcccCH----HHHHHHHHHhcCCcccCcCHHHHHHHHh
Confidence 011112223333 4889999999999999999999999986
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-41 Score=356.75 Aligned_cols=251 Identities=15% Similarity=0.177 Sum_probs=182.7
Q ss_pred cCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhcc-CCceeeEeeeeeccCCCCCCcceEEEEE
Q 004195 485 SSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLR-HSNLVSALGHCLDFSLDDPSISIIYLIF 562 (769)
Q Consensus 485 ~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~~~lV~ 562 (769)
.+.||+|+||.||+|+.. +|+.||||++... ....+.+|+.++++++ ||||+++++++.+.. ..++||
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~-------~~~lv~ 85 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQL-------HTFLVM 85 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS-------EEEEEE
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCC-------EEEEEE
Confidence 478999999999999976 6899999999743 3467889999999997 999999999998643 489999
Q ss_pred eccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc---eeeecCCCCchhhhc
Q 004195 563 EYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF---HVKINSYNLPLLAEA 639 (769)
Q Consensus 563 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~---~~kl~DFGla~~~~~ 639 (769)
||+++|+|.+++.... .+++.++..++.|+++||+|||+. +|+||||||+||+++.++ .+||+|||+++....
T Consensus 86 e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 161 (325)
T 3kn6_A 86 ELLNGGELFERIKKKK-HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP 161 (325)
T ss_dssp CCCCSCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC
T ss_pred EccCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCC
Confidence 9999999999998554 699999999999999999999999 999999999999997665 899999999975433
Q ss_pred cC--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH----HHhhhhhccccccccccccCc
Q 004195 640 RG--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL----VKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 640 ~~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~d~ 713 (769)
.. .....++..|++||.+.+..++.++|||||||++|||++|++||....... ......... .. +.
T Consensus 162 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~-~~-------~~ 233 (325)
T 3kn6_A 162 DNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIK-KG-------DF 233 (325)
T ss_dssp ----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHT-TT-------CC
T ss_pred CCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHH-cC-------CC
Confidence 22 123334567888999988899999999999999999999999997533210 001110000 00 00
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
............++.+++.+||+.||++|||++|+++|+|+...
T Consensus 234 ~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~ 277 (325)
T 3kn6_A 234 SFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDG 277 (325)
T ss_dssp CCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTT
T ss_pred CCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccC
Confidence 00000001123458999999999999999999999999999754
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-40 Score=363.20 Aligned_cols=270 Identities=15% Similarity=0.226 Sum_probs=201.2
Q ss_pred hcCCCCcCccccC--CceeEEEEEeC-CCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 479 TDCFDSSSFMCDA--SHGQIYKGKLT-DGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 479 t~~f~~~~~iG~G--~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
.++|+..+.||+| +||.||+|+.. +|+.||||+++...... .+.+.+|++++++++|||||++++++.+..
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---- 99 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN---- 99 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT----
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECC----
Confidence 3468889999999 99999999976 79999999997653322 356788999999999999999999998643
Q ss_pred CcceEEEEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYN 632 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFG 632 (769)
..++|||||++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 100 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg 173 (389)
T 3gni_B 100 ---ELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLR 173 (389)
T ss_dssp ---EEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGG
T ss_pred ---EEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccc
Confidence 489999999999999999733 34699999999999999999999999 99999999999999999999999999
Q ss_pred CchhhhccC---------CcceeecCCCcchhhhcc--CCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhc
Q 004195 633 LPLLAEARG---------KGSAEVSSPAKKTSVLAR--TEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVN 700 (769)
Q Consensus 633 la~~~~~~~---------~~~~~~~~~~~~pe~~~~--~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~ 700 (769)
.+....... .....++..|++||.+.+ ..++.++|||||||++|||+||++||.+.... .........
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 253 (389)
T 3gni_B 174 SNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGT 253 (389)
T ss_dssp GCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC----
T ss_pred cceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCC
Confidence 875432111 111233445788998876 57899999999999999999999999753321 111111000
Q ss_pred cccc--------cc-------------ccccc---Ccc------ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHH
Q 004195 701 IGTD--------EA-------------RKSIV---DPA------VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLW 750 (769)
Q Consensus 701 ~~~~--------~~-------------~~~~~---d~~------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 750 (769)
.... .. ..+.. .+. .....+......+.+++.+||+.||++|||++|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~ 333 (389)
T 3gni_B 254 VPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN 333 (389)
T ss_dssp ----------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 0000 00 00000 000 000112223455899999999999999999999999
Q ss_pred HhHhhhhh
Q 004195 751 NLQFATQI 758 (769)
Q Consensus 751 ~l~~~~~~ 758 (769)
|+||....
T Consensus 334 hp~f~~~~ 341 (389)
T 3gni_B 334 HSFFKQIK 341 (389)
T ss_dssp SGGGGGC-
T ss_pred CHHHHHHh
Confidence 99997543
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-40 Score=350.07 Aligned_cols=256 Identities=19% Similarity=0.292 Sum_probs=197.0
Q ss_pred hcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhh--ccCCceeeEeeeeeccCCCCCCcc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISK--LRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~--l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
.++|+..+.||+|+||+||+|+. +|+.||||++... ....+.+|.+++.. ++||||+++++++.+... ...
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~---~~~ 79 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRH---SST 79 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEET---TEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccC---CCc
Confidence 45788899999999999999998 6899999998643 34566777777766 799999999999875332 234
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccc--------cCCCCCccccCccccceeeCCCceeee
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLH--------TGIVPGVFSNNLKITDVLLDENFHVKI 628 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivHrDlKp~NILld~~~~~kl 628 (769)
..++||||+++|+|.++++.. .+++..+.+++.|+++||+||| +. +|+||||||+|||++.++.+||
T Consensus 80 ~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl 154 (301)
T 3q4u_A 80 QLWLITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCI 154 (301)
T ss_dssp EEEEEECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEE
T ss_pred eeEEehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEE
Confidence 589999999999999999754 6999999999999999999999 66 9999999999999999999999
Q ss_pred cCCCCchhhhccCC------cceeecCCCcchhhhccC------CCCCCCCeeehhHHHHHHHhC----------CCCCC
Q 004195 629 NSYNLPLLAEARGK------GSAEVSSPAKKTSVLART------EQDDKSDVYDIGIILIEIIVG----------RPITS 686 (769)
Q Consensus 629 ~DFGla~~~~~~~~------~~~~~~~~~~~pe~~~~~------~~~~ksDVwS~Gvil~elltG----------~~p~~ 686 (769)
+|||+++....... ....++..|++||.+.+. .++.++|||||||++|||+|| ++||.
T Consensus 155 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~ 234 (301)
T 3q4u_A 155 ADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFY 234 (301)
T ss_dssp CCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred eeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccc
Confidence 99999865433221 112345567889988765 345799999999999999999 77775
Q ss_pred Cch-----hHHHHhhhhhccccccccccccCccccC-CCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 687 ENV-----VVLVKDLLQVNIGTDEARKSIVDPAVMN-ECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 687 ~~~-----~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
... .......... . ...+.... ..+......+.+++.+||+.||++|||+.||++.+..+
T Consensus 235 ~~~~~~~~~~~~~~~~~~----~-----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 235 DVVPNDPSFEDMRKVVCV----D-----QQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp TTSCSSCCHHHHHHHHTT----S-----CCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred ccCCCCcchhhhhHHHhc----c-----CCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 421 1111111100 0 01111111 12234667799999999999999999999999998754
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-40 Score=358.06 Aligned_cols=257 Identities=19% Similarity=0.317 Sum_probs=204.9
Q ss_pred hcCCCCcCccccCCceeEEEEEeC--------CCcEEEEEEccccCCC-ChhHHHHHHHHHhhc-cCCceeeEeeeeecc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT--------DGTLVAIRSLKMSKKS-SPHMYTYHIELISKL-RHSNLVSALGHCLDF 548 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~--------~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~ 548 (769)
.++|...+.||+|+||.||+|+.. ++..||||+++..... ..+.+.+|+++++++ +|||||+++++|.+.
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 357888899999999999999852 2457999999754221 235688999999999 899999999999764
Q ss_pred CCCCCCcceEEEEEeccCCCchhhhhcCCC---------------CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCc
Q 004195 549 SLDDPSISIIYLIFEYAPNETLRSFISGPG---------------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNL 613 (769)
Q Consensus 549 ~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDl 613 (769)
+. .++||||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||
T Consensus 148 ~~-------~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dl 217 (382)
T 3tt0_A 148 GP-------LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDL 217 (382)
T ss_dssp SS-------CEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred Cc-------eEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCC
Confidence 43 799999999999999997332 3589999999999999999999999 9999999
Q ss_pred cccceeeCCCceeeecCCCCchhhhccC----CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCc
Q 004195 614 KITDVLLDENFHVKINSYNLPLLAEARG----KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSEN 688 (769)
Q Consensus 614 Kp~NILld~~~~~kl~DFGla~~~~~~~----~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~ 688 (769)
||+|||+++++.+||+|||+++...... ......+..|++||.+.+..++.++|||||||++|||+| |+.||...
T Consensus 218 kp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~ 297 (382)
T 3tt0_A 218 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 297 (382)
T ss_dssp CGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred CcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999999997654322 112223345788999988899999999999999999999 99999765
Q ss_pred hhHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 689 VVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
........+.... .+.....+++ ++.+++.+||+.||++|||++|++++++.+....
T Consensus 298 ~~~~~~~~~~~~~----------~~~~~~~~~~----~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 354 (382)
T 3tt0_A 298 PVEELFKLLKEGH----------RMDKPSNCTN----ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT 354 (382)
T ss_dssp CHHHHHHHHHTTC----------CCCCCSSCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHcCC----------CCCCCccCCH----HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 5443333222111 1111223444 4889999999999999999999999998775443
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-40 Score=349.54 Aligned_cols=261 Identities=16% Similarity=0.249 Sum_probs=202.3
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCCh---hHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSP---HMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~---~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
.++|+..+.||+|+||.||+|+.. +++.||||+++....... +.+.+|++++++++||||+++++++..... .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~---~ 87 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETP---A 87 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEET---T
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCC---C
Confidence 357888999999999999999964 799999999986543332 468899999999999999999999876432 1
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
....++||||+++|+|.+++...+ .+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 88 ~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a 163 (311)
T 3ork_A 88 GPLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIA 163 (311)
T ss_dssp EEEEEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred CcccEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence 234699999999999999997544 689999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhccCC-----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccccc
Q 004195 635 LLAEARGK-----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKS 709 (769)
Q Consensus 635 ~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (769)
+....... ....++..|++||.+.+..++.++|||||||++|||+||+.||..................
T Consensus 164 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~------ 237 (311)
T 3ork_A 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPI------ 237 (311)
T ss_dssp ------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCC------
T ss_pred ccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCC------
Confidence 76543221 1223466788999998889999999999999999999999999765433221111110000
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 710 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
........+++ ++.+++.+||+.||++||++.+++++.|+...
T Consensus 238 -~~~~~~~~~~~----~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 280 (311)
T 3ork_A 238 -PPSARHEGLSA----DLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280 (311)
T ss_dssp -CHHHHSTTCCH----HHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred -CcccccCCCCH----HHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence 00011122333 48899999999999999999999999998754
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=365.63 Aligned_cols=271 Identities=18% Similarity=0.304 Sum_probs=190.0
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.++|+..+.||+|+||+||+|+.. +|+.||||++...... ..+.+.+|++++++++|||||++++++.....+ ..
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--~~ 129 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVE--KF 129 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTT--TC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcc--cC
Confidence 367999999999999999999976 7999999999754222 235688999999999999999999999654321 23
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
...|+||||+. |+|.+++.... .+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 130 ~~~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~ 204 (458)
T 3rp9_A 130 DELYVVLEIAD-SDFKKLFRTPV-YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLAR 204 (458)
T ss_dssp CCEEEEECCCS-EEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred ceEEEEEeccc-cchhhhcccCC-CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccch
Confidence 45899999985 79999998654 699999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccC-----------------------------CcceeecCCCcchhhh-ccCCCCCCCCeeehhHHHHHHHh-----
Q 004195 636 LAEARG-----------------------------KGSAEVSSPAKKTSVL-ARTEQDDKSDVYDIGIILIEIIV----- 680 (769)
Q Consensus 636 ~~~~~~-----------------------------~~~~~~~~~~~~pe~~-~~~~~~~ksDVwS~Gvil~ellt----- 680 (769)
...... .....++..|++||.+ ....++.++||||||||+|||+|
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~ 284 (458)
T 3rp9_A 205 TVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKEN 284 (458)
T ss_dssp CTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTT
T ss_pred hccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccc
Confidence 653221 1112335567889975 45679999999999999999999
Q ss_pred ------CCCCCCCchh---------------------HHHHhhhhhccccc--ccccc-----------ccCcc---ccC
Q 004195 681 ------GRPITSENVV---------------------VLVKDLLQVNIGTD--EARKS-----------IVDPA---VMN 717 (769)
Q Consensus 681 ------G~~p~~~~~~---------------------~~~~~~~~~~~~~~--~~~~~-----------~~d~~---~~~ 717 (769)
|+++|.+... .....+... .+.. +.+.. .+... -..
T Consensus 285 ~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~-~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (458)
T 3rp9_A 285 VAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNI-LGTPSEEDIEALEKEDAKRYIRIFPKREGTDLA 363 (458)
T ss_dssp CSSGGGCCCSCC--------------------CHHHHHHHHHHHHH-HCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGG
T ss_pred ccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHH-cCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHH
Confidence 5666644221 111111100 0000 00000 00000 000
Q ss_pred CCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 718 ECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 718 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
...+....++.+|+.+||+.||++|||++|+++|+||...
T Consensus 364 ~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~ 403 (458)
T 3rp9_A 364 ERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEV 403 (458)
T ss_dssp GGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred HHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhc
Confidence 0111123458899999999999999999999999999764
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-40 Score=367.82 Aligned_cols=253 Identities=20% Similarity=0.314 Sum_probs=205.3
Q ss_pred HhcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
..++|...+.||+|+||.||+|++.++..||||+++... ...+.|.+|++++++++|||||++++++... .
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~--------~ 256 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTKE--------P 256 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEECSS--------S
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEeCC--------c
Confidence 456788889999999999999999888899999998643 3567899999999999999999999998632 2
Q ss_pred EEEEEeccCCCchhhhhcCCC-CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 558 IYLIFEYAPNETLRSFISGPG-YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
.++|||||++|+|.++++... ..+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 257 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~ 333 (454)
T 1qcf_A 257 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARV 333 (454)
T ss_dssp CEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGG
T ss_pred cEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceE
Confidence 699999999999999998432 3588999999999999999999999 999999999999999999999999999976
Q ss_pred hhccC---CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccC
Q 004195 637 AEARG---KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVD 712 (769)
Q Consensus 637 ~~~~~---~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 712 (769)
..... ......+..|++||.+....++.++|||||||++|||+| |+.||...........+.... .
T Consensus 334 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~----------~ 403 (454)
T 1qcf_A 334 IEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY----------R 403 (454)
T ss_dssp BCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTC----------C
T ss_pred cCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC----------C
Confidence 53221 111222345788999988899999999999999999999 999997654433322222111 1
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 713 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
......+++ ++.+++.+||+.||++|||+++|++.+....
T Consensus 404 ~~~~~~~~~----~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~ 443 (454)
T 1qcf_A 404 MPRPENCPE----ELYNIMMRCWKNRPEERPTFEYIQSVLDDFY 443 (454)
T ss_dssp CCCCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred CCCCCCCCH----HHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence 111123344 4889999999999999999999999988653
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=341.78 Aligned_cols=250 Identities=18% Similarity=0.338 Sum_probs=197.6
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCCh-------hHHHHHHHHHhhccCCceeeEeeeeeccCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSP-------HMYTYHIELISKLRHSNLVSALGHCLDFSLD 551 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~-------~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~ 551 (769)
++|+..+.||+|+||.||+|+.. +++.||||++........ +.+.+|++++++++||||+++++++.+.
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--- 95 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP--- 95 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT---
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC---
Confidence 56888899999999999999975 799999999975533221 5789999999999999999999998642
Q ss_pred CCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCC--ccccCccccceeeCCCce----
Q 004195 552 DPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPG--VFSNNLKITDVLLDENFH---- 625 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDlKp~NILld~~~~---- 625 (769)
.++||||+++|+|.+++......+++..+..++.|++.||+|||+. + |+||||||+||+++.++.
T Consensus 96 ------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~ 166 (287)
T 4f0f_A 96 ------PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPV 166 (287)
T ss_dssp ------TEEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSC
T ss_pred ------CeEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCce
Confidence 2699999999999999986666899999999999999999999998 7 999999999999988776
Q ss_pred -eeecCCCCchhhhccCCcceeecCCCcchhhhc--cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccc
Q 004195 626 -VKINSYNLPLLAEARGKGSAEVSSPAKKTSVLA--RTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIG 702 (769)
Q Consensus 626 -~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~--~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~ 702 (769)
+||+|||+++..... .....++..|.+||.+. ...++.++|||||||++|||++|+.||...............
T Consensus 167 ~~kl~Dfg~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~-- 243 (287)
T 4f0f_A 167 CAKVADFGLSQQSVHS-VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR-- 243 (287)
T ss_dssp CEEECCCTTCBCCSSC-EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHH--
T ss_pred eEEeCCCCcccccccc-ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHh--
Confidence 999999998644322 12233456678898873 445789999999999999999999999754322211111000
Q ss_pred cccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 703 TDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 703 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
.....+.....+++ .+.+++.+||+.||++|||++|+++.+.
T Consensus 244 -----~~~~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~ll~~L~ 285 (287)
T 4f0f_A 244 -----EEGLRPTIPEDCPP----RLRNVIELCWSGDPKKRPHFSYIVKELS 285 (287)
T ss_dssp -----HSCCCCCCCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -----ccCCCCCCCcccCH----HHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 00111222233444 4899999999999999999999999875
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-40 Score=342.39 Aligned_cols=259 Identities=16% Similarity=0.200 Sum_probs=204.8
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC------ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS------SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD 552 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~------~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~ 552 (769)
++|...+.||+|+||.||+|+.. +|+.||||.++..... ..+.+.+|++++++++||||+++++++.+..
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--- 81 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKT--- 81 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS---
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCC---
Confidence 46888999999999999999976 6999999999754321 3567999999999999999999999998643
Q ss_pred CCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc----eeee
Q 004195 553 PSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF----HVKI 628 (769)
Q Consensus 553 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~----~~kl 628 (769)
..++||||+++++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++ .+||
T Consensus 82 ----~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl 153 (283)
T 3bhy_A 82 ----DVVLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKL 153 (283)
T ss_dssp ----EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEE
T ss_pred ----eEEEEEeecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEE
Confidence 4899999999999999997543 689999999999999999999999 999999999999998877 8999
Q ss_pred cCCCCchhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccc
Q 004195 629 NSYNLPLLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEAR 707 (769)
Q Consensus 629 ~DFGla~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (769)
+|||++........ ....++..|.+||......++.++||||||+++|||++|+.||...........+....
T Consensus 154 ~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~------ 227 (283)
T 3bhy_A 154 IDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVN------ 227 (283)
T ss_dssp CCCTTCEECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTC------
T ss_pred EecccceeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcc------
Confidence 99999865533221 22234456788999888889999999999999999999999997654332222111100
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcc
Q 004195 708 KSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQG 760 (769)
Q Consensus 708 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~ 760 (769)
...++......++ .+.+++.+||+.||++|||+.|+++|+|+......
T Consensus 228 -~~~~~~~~~~~~~----~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~ 275 (283)
T 3bhy_A 228 -YDFDEEYFSNTSE----LAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRR 275 (283)
T ss_dssp -CCCCHHHHTTCCH----HHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHC
T ss_pred -cCCcchhcccCCH----HHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHH
Confidence 0011111122333 48899999999999999999999999999865443
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-40 Score=358.64 Aligned_cols=273 Identities=17% Similarity=0.221 Sum_probs=206.8
Q ss_pred cCHHHHHHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhcc-----CCceeeEee
Q 004195 470 FTLDELKEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLR-----HSNLVSALG 543 (769)
Q Consensus 470 ~~~~el~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-----H~nIv~l~~ 543 (769)
+++.+.....++|...+.||+|+||+||+|+.. +++.||||+++.. ....+.+.+|++++++++ |||||++++
T Consensus 25 ~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~ 103 (360)
T 3llt_A 25 FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHG 103 (360)
T ss_dssp CCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEE
T ss_pred eeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccc
Confidence 444444556788999999999999999999975 7899999999742 223456788999999986 999999999
Q ss_pred eeeccCCCCCCcceEEEEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC
Q 004195 544 HCLDFSLDDPSISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE 622 (769)
Q Consensus 544 ~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~ 622 (769)
++...+ ..++||||+ +++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.
T Consensus 104 ~~~~~~-------~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~ 172 (360)
T 3llt_A 104 KFMYYD-------HMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDD 172 (360)
T ss_dssp EEEETT-------EEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESC
T ss_pred eeeECC-------eeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEcc
Confidence 998643 489999999 89999999743 23589999999999999999999999 9999999999999975
Q ss_pred -------------------------CceeeecCCCCchhhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHH
Q 004195 623 -------------------------NFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIE 677 (769)
Q Consensus 623 -------------------------~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~e 677 (769)
++.+||+|||+++...... ....++..|++||.+.+..++.++|||||||++||
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 251 (360)
T 3llt_A 173 PYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH-GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAE 251 (360)
T ss_dssp TTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC-CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHH
T ss_pred ccccccccchhcccccccccccccCCCCEEEEeccCceecCCCC-cCccCcccccCcHHHcCCCCCCccchHHHHHHHHH
Confidence 7889999999997654322 23344567889999988899999999999999999
Q ss_pred HHhCCCCCCCchhHHHHhhhhhcccc-cccc---------ccccCc-----cccCCCC----------------HHHHHH
Q 004195 678 IIVGRPITSENVVVLVKDLLQVNIGT-DEAR---------KSIVDP-----AVMNECS----------------DESLKR 726 (769)
Q Consensus 678 lltG~~p~~~~~~~~~~~~~~~~~~~-~~~~---------~~~~d~-----~~~~~~~----------------~~~~~~ 726 (769)
|+||++||...........+...... .... ...++. ....... ......
T Consensus 252 ll~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (360)
T 3llt_A 252 LYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHEL 331 (360)
T ss_dssp HHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHH
T ss_pred HHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHH
Confidence 99999999765433222211111110 0000 000000 0000000 001145
Q ss_pred HHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 727 MMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 727 l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
+.+++.+||+.||++|||++|+++|+||.
T Consensus 332 l~~li~~~L~~dP~~Rpta~elL~hp~f~ 360 (360)
T 3llt_A 332 FCDFLYSILQIDPTLRPSPAELLKHKFLE 360 (360)
T ss_dssp HHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred HHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence 78999999999999999999999999973
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-40 Score=353.96 Aligned_cols=248 Identities=15% Similarity=0.202 Sum_probs=203.0
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--------ChhHHHHHHHHHhhccCCceeeEeeeeecc
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--------SPHMYTYHIELISKLRHSNLVSALGHCLDF 548 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--------~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~ 548 (769)
..++|...+.||+|+||.||+|+.. +|+.||||+++..... ..+.+.+|++++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 4567999999999999999999965 7899999999765321 234678899999999999999999999764
Q ss_pred CCCCCCcceEEEEEeccCCC-chhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceee
Q 004195 549 SLDDPSISIIYLIFEYAPNE-TLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVK 627 (769)
Q Consensus 549 ~~~~~~~~~~~lV~Ey~~~g-sL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~k 627 (769)
. ..++||||+.+| +|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 102 ~-------~~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~k 170 (335)
T 3dls_A 102 G-------FFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIK 170 (335)
T ss_dssp S-------EEEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEE
T ss_pred C-------EEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEE
Confidence 3 489999999777 9999998654 699999999999999999999999 999999999999999999999
Q ss_pred ecCCCCchhhhccCC-cceeecCCCcchhhhccCCC-CCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccc
Q 004195 628 INSYNLPLLAEARGK-GSAEVSSPAKKTSVLARTEQ-DDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDE 705 (769)
Q Consensus 628 l~DFGla~~~~~~~~-~~~~~~~~~~~pe~~~~~~~-~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (769)
|+|||+++....... ....++..|++||.+.+..+ +.++|||||||++|||++|+.||...... ...
T Consensus 171 L~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----~~~------ 239 (335)
T 3dls_A 171 LIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET-----VEA------ 239 (335)
T ss_dssp ECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-----TTT------
T ss_pred EeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-----Hhh------
Confidence 999999976544332 22334567788998877776 78999999999999999999999753210 000
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 706 ARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 706 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
...+ ...+++ ++.+++.+||+.||++|||++|+++|+|+...
T Consensus 240 ----~~~~--~~~~~~----~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~ 281 (335)
T 3dls_A 240 ----AIHP--PYLVSK----ELMSLVSGLLQPVPERRTTLEKLVTDPWVTQP 281 (335)
T ss_dssp ----CCCC--SSCCCH----HHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCC
T ss_pred ----ccCC--CcccCH----HHHHHHHHHccCChhhCcCHHHHhcCccccCC
Confidence 0000 112333 38899999999999999999999999998653
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-40 Score=367.84 Aligned_cols=257 Identities=24% Similarity=0.349 Sum_probs=202.9
Q ss_pred hcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
.++|...+.||+|+||.||+|++.++..||||+++... ...++|.+|++++++++||||+++++++.+ . ..
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~-------~~ 253 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E-------PI 253 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-S-------SC
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-C-------ce
Confidence 45677889999999999999999888889999998643 346789999999999999999999999865 2 26
Q ss_pred EEEEeccCCCchhhhhcC-CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 559 YLIFEYAPNETLRSFISG-PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
++||||+++|+|.+++.. .+..+++..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 254 ~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~ 330 (452)
T 1fmk_A 254 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLI 330 (452)
T ss_dssp EEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC--
T ss_pred EEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceec
Confidence 999999999999999973 223689999999999999999999999 9999999999999999999999999999765
Q ss_pred hccCCc---ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCc
Q 004195 638 EARGKG---SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 638 ~~~~~~---~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
...... ....+..|++||.+....++.++|||||||++|||+| |+.||...........+.... ..
T Consensus 331 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~----------~~ 400 (452)
T 1fmk_A 331 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY----------RM 400 (452)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC----------CC
T ss_pred CCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC----------CC
Confidence 432211 1122345788999888899999999999999999999 899997654333322221110 11
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhccc
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQGL 761 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~~ 761 (769)
.....+++ .+.+++.+||+.||++|||++++++.+.........
T Consensus 401 ~~~~~~~~----~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~ 444 (452)
T 1fmk_A 401 PCPPECPE----SLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 444 (452)
T ss_dssp CCCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCC
T ss_pred CCCCCCCH----HHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCc
Confidence 11123333 488999999999999999999999998865443333
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=363.98 Aligned_cols=251 Identities=19% Similarity=0.306 Sum_probs=201.9
Q ss_pred hcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
.++|...+.||+|+||.||+|++. |+.||||+++... ..+.|.+|++++++++|||||+++++|.+.. ...
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~~~ 262 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEK------GGL 262 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTT------SCE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCC------Cce
Confidence 356778899999999999999985 7899999997543 4578999999999999999999999987532 138
Q ss_pred EEEEeccCCCchhhhhcCCC-CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 559 YLIFEYAPNETLRSFISGPG-YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
++|||||++|+|.+++...+ ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 263 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~ 339 (450)
T 1k9a_A 263 YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 339 (450)
T ss_dssp EEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCcccc
Confidence 99999999999999998433 2479999999999999999999999 9999999999999999999999999998754
Q ss_pred hccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCcccc
Q 004195 638 EARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM 716 (769)
Q Consensus 638 ~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 716 (769)
..... ....+..|++||.+....++.++|||||||++|||+| |+.||.......+...+... ..+...
T Consensus 340 ~~~~~-~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~----------~~~~~p 408 (450)
T 1k9a_A 340 SSTQD-TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG----------YKMDAP 408 (450)
T ss_dssp C-------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTT----------CCCCCC
T ss_pred ccccc-CCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC----------CCCCCC
Confidence 32221 1233456889999988999999999999999999999 99998764432222212111 011112
Q ss_pred CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 717 NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 717 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
..+++ .+.+++.+||+.||++|||+.++++.+..+.
T Consensus 409 ~~~~~----~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~ 444 (450)
T 1k9a_A 409 DGCPP----AVYDVMKNCWHLDAATRPTFLQLREQLEHIR 444 (450)
T ss_dssp TTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CcCCH----HHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 23444 4889999999999999999999999987654
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-40 Score=357.98 Aligned_cols=264 Identities=19% Similarity=0.262 Sum_probs=206.7
Q ss_pred CHHHHHHHhcCCCCcCccccCCceeEEEEEe------CCCcEEEEEEccccCCC-ChhHHHHHHHHHhhc-cCCceeeEe
Q 004195 471 TLDELKEATDCFDSSSFMCDASHGQIYKGKL------TDGTLVAIRSLKMSKKS-SPHMYTYHIELISKL-RHSNLVSAL 542 (769)
Q Consensus 471 ~~~el~~~t~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l-~H~nIv~l~ 542 (769)
...+.....++|...+.||+|+||.||+|++ .+++.||||+++..... ..+.+.+|++++.++ +|||||+++
T Consensus 13 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~ 92 (359)
T 3vhe_A 13 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 92 (359)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeee
Confidence 4445555678899999999999999999983 24689999999754222 235689999999999 799999999
Q ss_pred eeeeccCCCCCCcceEEEEEeccCCCchhhhhcCCCC-------------------------------------------
Q 004195 543 GHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGY------------------------------------------- 579 (769)
Q Consensus 543 ~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~------------------------------------------- 579 (769)
++|.+.+. ..++||||+++|+|.+++.....
T Consensus 93 ~~~~~~~~------~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (359)
T 3vhe_A 93 GACTKPGG------PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSG 166 (359)
T ss_dssp EEECSTTS------CCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------
T ss_pred eeeecCCC------ceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccc
Confidence 99976332 37999999999999999974321
Q ss_pred ----------------------CCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 580 ----------------------KLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 580 ----------------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 243 (359)
T 3vhe_A 167 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDI 243 (359)
T ss_dssp -----------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCT
T ss_pred cccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeee
Confidence 289999999999999999999999 9999999999999999999999999999755
Q ss_pred hccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchh-HHHHhhhhhcccccccccccc
Q 004195 638 EARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVV-VLVKDLLQVNIGTDEARKSIV 711 (769)
Q Consensus 638 ~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 711 (769)
..... ....++..|++||.+.+..++.++|||||||++|||+| |++||..... ......+... .
T Consensus 244 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~----------~ 313 (359)
T 3vhe_A 244 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG----------T 313 (359)
T ss_dssp TSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHT----------C
T ss_pred cccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcC----------C
Confidence 33221 22334456889999888899999999999999999999 9999875432 1121111110 0
Q ss_pred CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 712 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.+.....+++ ++.+++.+||+.||++|||+.|+++|+....+
T Consensus 314 ~~~~~~~~~~----~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 355 (359)
T 3vhe_A 314 RMRAPDYTTP----EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 355 (359)
T ss_dssp CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCH----HHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 1111122333 48899999999999999999999999987644
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-40 Score=361.72 Aligned_cols=251 Identities=17% Similarity=0.263 Sum_probs=195.8
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCC--ChhHHHHHHHHHhhcc--CCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKS--SPHMYTYHIELISKLR--HSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~--H~nIv~l~~~~~~~~~~~~~~ 555 (769)
+.|...+.||+|+||.||+|...+++.||||++...... ..+.+.+|++++++++ |||||++++++...+
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~------ 129 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ------ 129 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS------
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCC------
Confidence 358889999999999999999888999999999755332 2357899999999996 599999999998643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||| +.+++|.+++.... .+++.++..++.||++||+|||+. +|+||||||+|||++ ++.+||+|||+++
T Consensus 130 -~~~lv~E-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~ 202 (390)
T 2zmd_A 130 -YIYMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIAN 202 (390)
T ss_dssp -EEEEEEE-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSC
T ss_pred -EEEEEEe-cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccc
Confidence 3899999 56789999998554 689999999999999999999999 999999999999996 5889999999997
Q ss_pred hhhccC----CcceeecCCCcchhhhcc-----------CCCCCCCCeeehhHHHHHHHhCCCCCCCchh--HHHHhhhh
Q 004195 636 LAEARG----KGSAEVSSPAKKTSVLAR-----------TEQDDKSDVYDIGIILIEIIVGRPITSENVV--VLVKDLLQ 698 (769)
Q Consensus 636 ~~~~~~----~~~~~~~~~~~~pe~~~~-----------~~~~~ksDVwS~Gvil~elltG~~p~~~~~~--~~~~~~~~ 698 (769)
...... .....++..|++||.+.+ ..++.++|||||||++|||++|++||..... ......+
T Consensus 203 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~- 281 (390)
T 2zmd_A 203 QMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII- 281 (390)
T ss_dssp CC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHH-
T ss_pred cccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHh-
Confidence 654322 122345567788998754 3689999999999999999999999975321 1111111
Q ss_pred hccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 699 VNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 699 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
++......+......+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 282 -------------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~ 327 (390)
T 2zmd_A 282 -------------DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ 327 (390)
T ss_dssp -------------CTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred -------------CccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCcccc
Confidence 1111111111112348899999999999999999999999999754
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-40 Score=352.16 Aligned_cols=257 Identities=20% Similarity=0.275 Sum_probs=205.0
Q ss_pred HHhcCCCCcCccccCCceeEEEEEeC------CCcEEEEEEccccCCC-ChhHHHHHHHHHhhccCCceeeEeeeeeccC
Q 004195 477 EATDCFDSSSFMCDASHGQIYKGKLT------DGTLVAIRSLKMSKKS-SPHMYTYHIELISKLRHSNLVSALGHCLDFS 549 (769)
Q Consensus 477 ~~t~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~ 549 (769)
...++|...+.||+|+||.||+|+.. +++.||||+++..... ..+.+.+|++++++++||||++++++|.+..
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 123 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK 123 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence 34578999999999999999999974 3489999999754321 2357899999999999999999999997644
Q ss_pred CCCCCcceEEEEEeccCCCchhhhhcCC-----------------------CCCCCHHHHHHHHHHHHHHhcccccCCCC
Q 004195 550 LDDPSISIIYLIFEYAPNETLRSFISGP-----------------------GYKLTWVQRIAAAIAIVKGVQFLHTGIVP 606 (769)
Q Consensus 550 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~-----------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ 606 (769)
. .++||||+++|+|.+++... ...+++.+++.++.|+++||+|||+.
T Consensus 124 ~-------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~--- 193 (343)
T 1luf_A 124 P-------MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER--- 193 (343)
T ss_dssp S-------CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred c-------eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence 3 79999999999999999742 14689999999999999999999999
Q ss_pred CccccCccccceeeCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-C
Q 004195 607 GVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-G 681 (769)
Q Consensus 607 ~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G 681 (769)
+|+||||||+||+++.++.+||+|||+++....... ....++..|++||.+....++.++|||||||++|||+| |
T Consensus 194 ~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g 273 (343)
T 1luf_A 194 KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYG 273 (343)
T ss_dssp TCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTT
T ss_pred CeecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcC
Confidence 999999999999999999999999999976533221 12223445788999888899999999999999999999 9
Q ss_pred CCCCCCchhHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 682 RPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 682 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
+.||...........+.... .+.....+++ .+.+++.+||+.||++|||+.|+++++....+
T Consensus 274 ~~p~~~~~~~~~~~~~~~~~----------~~~~~~~~~~----~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~ 335 (343)
T 1luf_A 274 LQPYYGMAHEEVIYYVRDGN----------ILACPENCPL----ELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 335 (343)
T ss_dssp CCTTTTSCHHHHHHHHHTTC----------CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred CCcCCCCChHHHHHHHhCCC----------cCCCCCCCCH----HHHHHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence 99987654433322221100 0111123333 48899999999999999999999999987644
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-40 Score=355.17 Aligned_cols=256 Identities=18% Similarity=0.204 Sum_probs=199.8
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCCc
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
..++|+..+.||+|+||.||+|+.. +|+.||||++..... ...+|++++.++ +||||+++++++.+..
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~------ 89 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGK------ 89 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSS------
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCC------
Confidence 4567899999999999999999976 689999999975432 345788899888 7999999999997643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC----ceeeecCC
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN----FHVKINSY 631 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~----~~~kl~DF 631 (769)
..++||||+++|+|.+++...+ .+++..+..++.||+.||+|||+. +|+||||||+|||+.++ +.+||+||
T Consensus 90 -~~~lv~E~~~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Df 164 (342)
T 2qr7_A 90 -YVYVVTELMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDF 164 (342)
T ss_dssp -EEEEEECCCCSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCC
T ss_pred -EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEEC
Confidence 4899999999999999998654 699999999999999999999999 99999999999998433 35999999
Q ss_pred CCchhhhccC--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccccc
Q 004195 632 NLPLLAEARG--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKS 709 (769)
Q Consensus 632 Gla~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (769)
|+++...... .....++..|++||.+.+..++.++|||||||++|||++|++||..........+........ ..
T Consensus 165 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~---~~ 241 (342)
T 2qr7_A 165 GFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGK---FS 241 (342)
T ss_dssp TTCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCC---CC
T ss_pred CCcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCC---cc
Confidence 9997553322 223345667889999887778999999999999999999999997532111111111100000 00
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 710 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.........+ ..+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 242 -~~~~~~~~~s----~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~ 283 (342)
T 2qr7_A 242 -LSGGYWNSVS----DTAKDLVSKMLHVDPHQRLTAALVLRHPWIVH 283 (342)
T ss_dssp -CCSTTTTTSC----HHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHT
T ss_pred -cCccccccCC----HHHHHHHHHHCCCChhHCcCHHHHhcCCeecC
Confidence 0111112233 34889999999999999999999999999964
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-40 Score=351.02 Aligned_cols=269 Identities=18% Similarity=0.273 Sum_probs=197.3
Q ss_pred HHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 477 EATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 477 ~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
...++|...+.||+|+||+||+|+.. +|+.||||+++..... ..+.+.+|++++++++||||+++++++.+..
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---- 106 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNH---- 106 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETT----
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCC----
Confidence 34567999999999999999999965 7999999999755322 2356789999999999999999999998643
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceee-----CCCceeee
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLL-----DENFHVKI 628 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl-----d~~~~~kl 628 (769)
..++||||++ |+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+|||+ ++++.+||
T Consensus 107 ---~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl 178 (329)
T 3gbz_A 107 ---RLHLIFEYAE-NDLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKI 178 (329)
T ss_dssp ---EEEEEEECCS-EEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEE
T ss_pred ---EEEEEEecCC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEE
Confidence 4899999997 59999998554 589999999999999999999999 99999999999999 45566999
Q ss_pred cCCCCchhhhccC--CcceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhc-ccc
Q 004195 629 NSYNLPLLAEARG--KGSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVN-IGT 703 (769)
Q Consensus 629 ~DFGla~~~~~~~--~~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~-~~~ 703 (769)
+|||+++...... .....++..|++||.+.+. .++.++|||||||++|||++|++||....... ........ ...
T Consensus 179 ~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 258 (329)
T 3gbz_A 179 GDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPD 258 (329)
T ss_dssp CCTTHHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCC
T ss_pred CcCCCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCc
Confidence 9999997654322 1223345678889988764 48999999999999999999999997654322 22221110 011
Q ss_pred cccccccc--------CccccCCC-----CHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 704 DEARKSIV--------DPAVMNEC-----SDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 704 ~~~~~~~~--------d~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
...+.... .+...... ......++.+++.+||+.||++|||++|+++|+||...
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 325 (329)
T 3gbz_A 259 DTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHN 325 (329)
T ss_dssp TTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSS
T ss_pred hhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCC
Confidence 00000000 00000000 00122458899999999999999999999999999754
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-39 Score=352.25 Aligned_cols=270 Identities=19% Similarity=0.279 Sum_probs=200.0
Q ss_pred HHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC-----ChhHHHHHHHHHhhccCCceeeEeeeeeccCC
Q 004195 477 EATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS-----SPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550 (769)
Q Consensus 477 ~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~ 550 (769)
...++|...+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++||||+++++++.+...
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34568999999999999999999976 6999999999754221 13468899999999999999999999976433
Q ss_pred CCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecC
Q 004195 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINS 630 (769)
Q Consensus 551 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~D 630 (769)
.++||||+++ +|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 87 -------~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~D 155 (346)
T 1ua2_A 87 -------ISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLAD 155 (346)
T ss_dssp -------CEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC
T ss_pred -------eEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEe
Confidence 7999999985 89999887666789999999999999999999999 999999999999999999999999
Q ss_pred CCCchhhhccC--CcceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhc-ccccc
Q 004195 631 YNLPLLAEARG--KGSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVN-IGTDE 705 (769)
Q Consensus 631 FGla~~~~~~~--~~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~-~~~~~ 705 (769)
||+++...... .....++..|++||.+.+. .++.++|||||||++|||++|++||....... ...+.... .....
T Consensus 156 fg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~ 235 (346)
T 1ua2_A 156 FGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEE 235 (346)
T ss_dssp CGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTT
T ss_pred cccceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChh
Confidence 99997654322 2223445667889987654 58999999999999999999999987654322 22222211 11111
Q ss_pred cccccc---C---ccccCCCC-----HHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 706 ARKSIV---D---PAVMNECS-----DESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 706 ~~~~~~---d---~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.+.+.. + .......+ ......+.+++.+||+.||++|||++|+++|+||...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~ 298 (346)
T 1ua2_A 236 QWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNR 298 (346)
T ss_dssp TSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSS
T ss_pred hhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcC
Confidence 111110 0 00000001 1123458999999999999999999999999999753
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-40 Score=359.32 Aligned_cols=274 Identities=15% Similarity=0.234 Sum_probs=199.8
Q ss_pred HHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCC--
Q 004195 476 KEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD-- 552 (769)
Q Consensus 476 ~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~-- 552 (769)
....++|...+.||+|+||+||+|+.. +|+.||||++.... ....+|+++++.++|||||++++++.......
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 345678999999999999999999964 79999999986442 23347999999999999999999986543210
Q ss_pred -----------------------------CCcceEEEEEeccCCCchhhhhc---CCCCCCCHHHHHHHHHHHHHHhccc
Q 004195 553 -----------------------------PSISIIYLIFEYAPNETLRSFIS---GPGYKLTWVQRIAAAIAIVKGVQFL 600 (769)
Q Consensus 553 -----------------------------~~~~~~~lV~Ey~~~gsL~~~l~---~~~~~l~~~~~~~i~~~ia~gL~yL 600 (769)
......++||||++ |+|.+.+. .....+++..+..++.|+++||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 22345789999998 58877765 2334799999999999999999999
Q ss_pred ccCCCCCccccCccccceeeC-CCceeeecCCCCchhhhccC-CcceeecCCCcchhhhccC-CCCCCCCeeehhHHHHH
Q 004195 601 HTGIVPGVFSNNLKITDVLLD-ENFHVKINSYNLPLLAEARG-KGSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIE 677 (769)
Q Consensus 601 H~~~~~~ivHrDlKp~NILld-~~~~~kl~DFGla~~~~~~~-~~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~e 677 (769)
|+. +|+||||||+||+++ .++.+||+|||+++...... .....++..|++||.+.+. .++.++||||+||++||
T Consensus 158 H~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e 234 (383)
T 3eb0_A 158 HSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGE 234 (383)
T ss_dssp HTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHH
T ss_pred HHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHH
Confidence 998 999999999999998 68999999999997553332 2233345567889987664 58999999999999999
Q ss_pred HHhCCCCCCCchhH-HHHhhhhhcccc-cccc-------ccccCcccc-----CCCCHHHHHHHHHHHHHcCcCCCCCCC
Q 004195 678 IIVGRPITSENVVV-LVKDLLQVNIGT-DEAR-------KSIVDPAVM-----NECSDESLKRMMELCLRCLSNEPKDRP 743 (769)
Q Consensus 678 lltG~~p~~~~~~~-~~~~~~~~~~~~-~~~~-------~~~~d~~~~-----~~~~~~~~~~l~~li~~cl~~dP~~RP 743 (769)
|++|++||...... ....++...... .+.+ .+..-|... ...+...+..+.+++.+||+.||++||
T Consensus 235 ll~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 314 (383)
T 3eb0_A 235 LILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRI 314 (383)
T ss_dssp HHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSC
T ss_pred HHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCC
Confidence 99999999865432 222222211100 0000 000000000 001112234489999999999999999
Q ss_pred CHHHHHHHhHhhhh
Q 004195 744 SVEDTLWNLQFATQ 757 (769)
Q Consensus 744 s~~evl~~l~~~~~ 757 (769)
|+.|+++|+||...
T Consensus 315 t~~e~l~hp~f~~~ 328 (383)
T 3eb0_A 315 NPYEAMAHPFFDHL 328 (383)
T ss_dssp CHHHHHTSGGGHHH
T ss_pred CHHHHhcCHHHHHH
Confidence 99999999999754
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-40 Score=346.30 Aligned_cols=258 Identities=19% Similarity=0.284 Sum_probs=201.7
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
..+.|+..+.||+|+||.||+|+.. +|+.||+|++........+.+.+|++++++++||||+++++++.+..
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------- 89 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDG------- 89 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC--------
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCC-------
Confidence 3457888999999999999999976 68999999998766666788999999999999999999999998643
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++||||+++++|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 90 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 166 (302)
T 2j7t_A 90 KLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAK 166 (302)
T ss_dssp CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHH
T ss_pred eEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcc
Confidence 38999999999999999875445799999999999999999999999 999999999999999999999999998754
Q ss_pred hhcc--CCcceeecCCCcchhhh-----ccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccccc
Q 004195 637 AEAR--GKGSAEVSSPAKKTSVL-----ARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKS 709 (769)
Q Consensus 637 ~~~~--~~~~~~~~~~~~~pe~~-----~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (769)
.... ......++..|.+||.. ....++.++|||||||++|||+||++|+............... .. ..
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~---~~ 241 (302)
T 2j7t_A 167 NLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS--DP---PT 241 (302)
T ss_dssp HHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS--CC---CC
T ss_pred ccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhcc--CC---cc
Confidence 3211 12223345567788876 3567899999999999999999999998764432221111100 00 00
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 710 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.. ....++ ..+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 242 ~~---~~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 282 (302)
T 2j7t_A 242 LL---TPSKWS----VEFRDFLKIALDKNPETRPSAAQLLEHPFVSSI 282 (302)
T ss_dssp CS---SGGGSC----HHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTC
T ss_pred cC---CccccC----HHHHHHHHHHcccChhhCCCHHHHhcChHHhhh
Confidence 00 011223 348899999999999999999999999998753
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-40 Score=342.73 Aligned_cols=255 Identities=17% Similarity=0.247 Sum_probs=193.9
Q ss_pred hcCCCCcCccccCCceeEEEEEeCC----CcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLTD----GTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~~----g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
.++|+..+.||+|+||.||+|+... +..||+|.++.... ...+.+.+|+.++++++||||+++++++.+.
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----- 88 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN----- 88 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS-----
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEccC-----
Confidence 3568888999999999999999642 45799999875422 2235688999999999999999999998532
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
..++||||+++|+|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 89 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 162 (281)
T 1mp8_A 89 ---PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGL 162 (281)
T ss_dssp ---SCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC---
T ss_pred ---ccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECcccc
Confidence 26899999999999999986555799999999999999999999999 999999999999999999999999999
Q ss_pred chhhhccCCc---ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhcccccccccc
Q 004195 634 PLLAEARGKG---SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKS 709 (769)
Q Consensus 634 a~~~~~~~~~---~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (769)
++........ ....+..|++||......++.++|||||||++|||++ |++||...........+...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~--------- 233 (281)
T 1mp8_A 163 SRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG--------- 233 (281)
T ss_dssp ----------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT---------
T ss_pred ccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcC---------
Confidence 9765433211 1122235788999888899999999999999999997 99998764433222211110
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 710 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
..+.....+++ .+.+++.+||+.||++|||+.|++++++...+.
T Consensus 234 -~~~~~~~~~~~----~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 277 (281)
T 1mp8_A 234 -ERLPMPPNCPP----TLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 277 (281)
T ss_dssp -CCCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -CCCCCCCCCCH----HHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 00111223344 488999999999999999999999999876543
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-40 Score=359.14 Aligned_cols=255 Identities=15% Similarity=0.182 Sum_probs=195.2
Q ss_pred cCCCCc-CccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhh-ccCCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDSS-SFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISK-LRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~~-~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~-l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
++|... +.||+|+||+||+|+.. +|+.||||+++. ...+.+|++++.+ .+||||++++++|..... ...
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~---~~~ 132 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYA---GRK 132 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEET---TEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeeccc---CCc
Confidence 456555 68999999999999976 699999999963 2567889998755 489999999999864221 134
Q ss_pred eEEEEEeccCCCchhhhhcCCC-CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC---CceeeecCCC
Q 004195 557 IIYLIFEYAPNETLRSFISGPG-YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE---NFHVKINSYN 632 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---~~~~kl~DFG 632 (769)
..++|||||++|+|.+++.... ..+++..+..|+.||++||+|||+. +|+||||||+|||++. ++.+||+|||
T Consensus 133 ~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG 209 (400)
T 1nxk_A 133 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFG 209 (400)
T ss_dssp EEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecc
Confidence 5899999999999999998543 4699999999999999999999998 9999999999999987 7899999999
Q ss_pred CchhhhccC-CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-----HHhhhhhccccccc
Q 004195 633 LPLLAEARG-KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-----VKDLLQVNIGTDEA 706 (769)
Q Consensus 633 la~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-----~~~~~~~~~~~~~~ 706 (769)
+++...... .....++..|++||.+.+..++.++|||||||++|||+||++||....... ...+......
T Consensus 210 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~---- 285 (400)
T 1nxk_A 210 FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE---- 285 (400)
T ss_dssp TCEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCC----
T ss_pred cccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCccc----
Confidence 997554322 233445667889999988899999999999999999999999997543211 1111110000
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 707 RKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 707 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
...+ ....+++ ++.+++.+||+.||++|||+.|+++|+|+...
T Consensus 286 ---~~~~-~~~~~s~----~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~ 328 (400)
T 1nxk_A 286 ---FPNP-EWSEVSE----EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 328 (400)
T ss_dssp ---CCTT-TTTTSCH----HHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred ---CCCc-ccccCCH----HHHHHHHHHCCCChhHCcCHHHHhcCccccCC
Confidence 0001 1122333 48899999999999999999999999999753
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-39 Score=337.41 Aligned_cols=253 Identities=17% Similarity=0.285 Sum_probs=205.0
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
++|...+.||+|+||.||+|+..+++.||+|++.... ...+.+.+|++++++++||||+++++++.+.+. .+
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-------~~ 79 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP-------IC 79 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS-------CE
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC-------eE
Confidence 4577889999999999999999888899999998543 345789999999999999999999999976443 79
Q ss_pred EEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhc
Q 004195 560 LIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEA 639 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~ 639 (769)
+||||+++++|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 80 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 156 (267)
T 3t9t_A 80 LVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 156 (267)
T ss_dssp EEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred EEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccc
Confidence 99999999999999986555789999999999999999999999 999999999999999999999999999875432
Q ss_pred cC---CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCccc
Q 004195 640 RG---KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAV 715 (769)
Q Consensus 640 ~~---~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 715 (769)
.. .....++..|.+||......++.++||||||+++|||+| |++||...........+.... .+..
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~----------~~~~ 226 (267)
T 3t9t_A 157 DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF----------RLYK 226 (267)
T ss_dssp HHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTC----------CCCC
T ss_pred ccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC----------cCCC
Confidence 11 111222345788999888889999999999999999999 899987654333222121110 0111
Q ss_pred cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 716 MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 716 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
...+++ .+.+++.+||+.||++|||+.|+++++....+
T Consensus 227 ~~~~~~----~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 227 PRLAST----HVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp CTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CccCcH----HHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 122333 48899999999999999999999999987654
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-40 Score=358.52 Aligned_cols=269 Identities=20% Similarity=0.290 Sum_probs=194.0
Q ss_pred HHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhcc-CCceeeEeeeeeccCCCC
Q 004195 477 EATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLR-HSNLVSALGHCLDFSLDD 552 (769)
Q Consensus 477 ~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~ 552 (769)
...++|+..+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|+.++.++. |||||++++++...+
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~--- 82 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADN--- 82 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTT---
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCC---
Confidence 34578999999999999999999975 7999999999654222 2356788999999997 999999999997533
Q ss_pred CCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCC
Q 004195 553 PSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYN 632 (769)
Q Consensus 553 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFG 632 (769)
....|+|||||+ |+|.+++... .+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 83 --~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG 154 (388)
T 3oz6_A 83 --DRDVYLVFDYME-TDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFG 154 (388)
T ss_dssp --SSCEEEEEECCS-EEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred --CCEEEEEecccC-cCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCc
Confidence 234899999997 6999999753 589999999999999999999999 99999999999999999999999999
Q ss_pred Cchhhhcc-----------------------CCcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCc
Q 004195 633 LPLLAEAR-----------------------GKGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSEN 688 (769)
Q Consensus 633 la~~~~~~-----------------------~~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~ 688 (769)
+++..... ......++..|++||.+.+ ..++.++||||+||++|||++|++||.+.
T Consensus 155 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 234 (388)
T 3oz6_A 155 LSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS 234 (388)
T ss_dssp TCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC
Confidence 99654221 0112234556788998865 67899999999999999999999999765
Q ss_pred hhHHHHhhhhhccccc--cccccccCc-----------------cccCCC-------------CHHHHHHHHHHHHHcCc
Q 004195 689 VVVLVKDLLQVNIGTD--EARKSIVDP-----------------AVMNEC-------------SDESLKRMMELCLRCLS 736 (769)
Q Consensus 689 ~~~~~~~~~~~~~~~~--~~~~~~~d~-----------------~~~~~~-------------~~~~~~~l~~li~~cl~ 736 (769)
........+......+ +.+..+..+ ...... ......++.+++.+||+
T Consensus 235 ~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~ 314 (388)
T 3oz6_A 235 STMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQ 314 (388)
T ss_dssp SHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhc
Confidence 4322221111111111 000000000 000000 00112348899999999
Q ss_pred CCCCCCCCHHHHHHHhHhhh
Q 004195 737 NEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 737 ~dP~~RPs~~evl~~l~~~~ 756 (769)
.||++|||++|+++|+|+..
T Consensus 315 ~dP~~R~t~~e~l~Hp~~~~ 334 (388)
T 3oz6_A 315 FNPNKRISANDALKHPFVSI 334 (388)
T ss_dssp SSGGGSCCHHHHTTSTTTTT
T ss_pred cCcccCCCHHHHhCCHHHHH
Confidence 99999999999999999864
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-40 Score=351.11 Aligned_cols=253 Identities=20% Similarity=0.275 Sum_probs=200.3
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcE----EEEEEccccC-CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTL----VAIRSLKMSK-KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~----vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
++|...+.||+|+||+||+|++. +++. ||+|.+.... ....+.+.+|+.++++++||||++++++|.+.
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----- 87 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGS----- 87 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECBS-----
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC-----
Confidence 46778899999999999999965 4554 7888875442 23345688899999999999999999998632
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
..++||||+++|+|.+++......+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 88 ---~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~ 161 (325)
T 3kex_A 88 ---SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGV 161 (325)
T ss_dssp ---SEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSG
T ss_pred ---ccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCc
Confidence 27999999999999999987655799999999999999999999999 999999999999999999999999999
Q ss_pred chhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccc
Q 004195 634 PLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARK 708 (769)
Q Consensus 634 a~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (769)
++....... ....++..|++||.+.+..++.++|||||||++|||+| |+.||...........+.....
T Consensus 162 a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~------ 235 (325)
T 3kex_A 162 ADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGER------ 235 (325)
T ss_dssp GGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCB------
T ss_pred ccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCC------
Confidence 976543322 12223346888999988899999999999999999999 9999976543333332221100
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
+.....++. .+.+++.+||+.||++|||+.|+++++.....
T Consensus 236 ----~~~~~~~~~----~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 236 ----LAQPQICTI----DVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp ----CCCCTTBCT----TTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred ----CCCCCcCcH----HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 001111222 37789999999999999999999999986643
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-40 Score=362.53 Aligned_cols=258 Identities=21% Similarity=0.246 Sum_probs=196.7
Q ss_pred HHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC--------CChhHHHHHHHHHhhccCCceeeEeeeeec
Q 004195 477 EATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK--------SSPHMYTYHIELISKLRHSNLVSALGHCLD 547 (769)
Q Consensus 477 ~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~--------~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~ 547 (769)
...++|...+.||+|+||.||+|+.. +++.||||++..... .....+.+|++++++++|||||++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 34678999999999999999999976 689999999975421 112358899999999999999999999853
Q ss_pred cCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC---c
Q 004195 548 FSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN---F 624 (769)
Q Consensus 548 ~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~---~ 624 (769)
. ..++||||+++|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+|||++.+ +
T Consensus 212 ~--------~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~ 279 (419)
T 3i6u_A 212 E--------DYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDC 279 (419)
T ss_dssp S--------EEEEEEECCTTCBGGGGTSSSC-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSC
T ss_pred C--------ceEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcc
Confidence 2 2799999999999999997654 699999999999999999999999 99999999999999654 4
Q ss_pred eeeecCCCCchhhhccCC-cceeecCCCcchhhhc---cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhh
Q 004195 625 HVKINSYNLPLLAEARGK-GSAEVSSPAKKTSVLA---RTEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQV 699 (769)
Q Consensus 625 ~~kl~DFGla~~~~~~~~-~~~~~~~~~~~pe~~~---~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~ 699 (769)
.+||+|||+++....... ....++..|++||.+. ...++.++|||||||++|||+||++||...... .....+..
T Consensus 280 ~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~ 359 (419)
T 3i6u_A 280 LIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 359 (419)
T ss_dssp CEEECCSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHT
T ss_pred eEEEeecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhc
Confidence 599999999976543322 2334566788899874 356788999999999999999999999753211 11111110
Q ss_pred ccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 700 NIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 700 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.. . ...+......+ ..+.+++.+||+.||++|||++|+++|+|+...
T Consensus 360 ~~--~-----~~~~~~~~~~~----~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~ 406 (419)
T 3i6u_A 360 GK--Y-----NFIPEVWAEVS----EKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 406 (419)
T ss_dssp TC--C-----CCCHHHHTTSC----HHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCCH
T ss_pred CC--C-----CCCchhhcccC----HHHHHHHHHHccCChhHCcCHHHHhCCcccCCh
Confidence 00 0 00111112233 348899999999999999999999999999754
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-40 Score=350.33 Aligned_cols=261 Identities=17% Similarity=0.268 Sum_probs=187.5
Q ss_pred HhcCCCCcCccccCCceeEEEEEeCC-Cc---EEEEEEccccCC--CChhHHHHHHHHHhhccCCceeeEeeeeeccCCC
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLTD-GT---LVAIRSLKMSKK--SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLD 551 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~~-g~---~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~ 551 (769)
..++|+..+.||+|+||.||+|+... +. .||||+++.... ...+.+.+|++++++++||||+++++++.+....
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 35678899999999999999999753 32 799999976532 2346789999999999999999999999764431
Q ss_pred CCCcceEEEEEeccCCCchhhhhcC-----CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCcee
Q 004195 552 DPSISIIYLIFEYAPNETLRSFISG-----PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHV 626 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~~-----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ 626 (769)
+ .....++||||+++|+|.+++.. ....+++..+..++.|+++||+|||+. +|+||||||+||++++++.+
T Consensus 101 ~-~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 101 G-RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCE
T ss_pred c-CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCE
Confidence 1 11234899999999999999862 223589999999999999999999999 99999999999999999999
Q ss_pred eecCCCCchhhhccCCc----ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhcc
Q 004195 627 KINSYNLPLLAEARGKG----SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNI 701 (769)
Q Consensus 627 kl~DFGla~~~~~~~~~----~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~ 701 (769)
||+|||+++........ ....+..|++||.+.+..++.++|||||||++|||+| |++||...........+....
T Consensus 177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~ 256 (323)
T 3qup_A 177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGN 256 (323)
T ss_dssp EECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC
T ss_pred EEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCC
Confidence 99999999765332211 1122335788999888899999999999999999999 899987654332222111100
Q ss_pred ccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 702 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.+.....+++ .+.+++.+||+.||++|||+.|+++.+..+.
T Consensus 257 ----------~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l 297 (323)
T 3qup_A 257 ----------RLKQPPECME----EVYDLMYQCWSADPKQRPSFTCLRMELENIL 297 (323)
T ss_dssp ----------CCCCCTTCCH----HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----------CCCCCCccCH----HHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 0111123333 4889999999999999999766666665443
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-40 Score=355.52 Aligned_cols=250 Identities=14% Similarity=0.180 Sum_probs=195.9
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC---CChhHHHHHHHH-HhhccCCceeeEeeeeeccCCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK---SSPHMYTYHIEL-ISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~Ei~~-l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
++|+..+.||+|+||.||+|+.+ +++.||||+++.... ...+.+.+|..+ ++.++|||||++++++.+.+
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~----- 112 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD----- 112 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSS-----
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCC-----
Confidence 56888999999999999999976 688999999976532 223456777776 57789999999999998643
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
..|+||||+++|+|.+++.+.. .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 113 --~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a 186 (373)
T 2r5t_A 113 --KLYFVLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLC 186 (373)
T ss_dssp --EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBC
T ss_pred --EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccc
Confidence 4899999999999999997543 688999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhcc--CCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHH-Hhhhhhcccccccccccc
Q 004195 635 LLAEAR--GKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLV-KDLLQVNIGTDEARKSIV 711 (769)
Q Consensus 635 ~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 711 (769)
+..... ......++..|++||.+.+..++.++|||||||++|||++|++||........ ..+....
T Consensus 187 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~----------- 255 (373)
T 2r5t_A 187 KENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKP----------- 255 (373)
T ss_dssp GGGBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSC-----------
T ss_pred cccccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcc-----------
Confidence 753222 22334456678899999888999999999999999999999999976543322 2222110
Q ss_pred CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCH----HHHHHHhHhhh
Q 004195 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSV----EDTLWNLQFAT 756 (769)
Q Consensus 712 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~----~evl~~l~~~~ 756 (769)
..+....++ .+.+++.+||+.||++||++ .|+.+|+||..
T Consensus 256 -~~~~~~~~~----~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~ 299 (373)
T 2r5t_A 256 -LQLKPNITN----SARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSL 299 (373)
T ss_dssp -CCCCSSSCH----HHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTT
T ss_pred -cCCCCCCCH----HHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccC
Confidence 111122333 48899999999999999986 69999999864
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-39 Score=342.29 Aligned_cols=255 Identities=21% Similarity=0.317 Sum_probs=207.7
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC-CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK-KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
.+.|...+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++.+..
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------- 93 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT------- 93 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-------
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-------
Confidence 346888999999999999999965 68999999997653 234578999999999999999999999998643
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++||||+++++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 94 ~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~ 168 (303)
T 3a7i_A 94 KLWIIMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQ 168 (303)
T ss_dssp EEEEEEECCTTEEHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred eEEEEEEeCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeeccccee
Confidence 489999999999999999753 689999999999999999999999 999999999999999999999999999865
Q ss_pred hhccC--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCcc
Q 004195 637 AEARG--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 637 ~~~~~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
..... .....++..|.+||......++.++|||||||++|||++|++||...........+... ..+.
T Consensus 169 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~----------~~~~ 238 (303)
T 3a7i_A 169 LTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN----------NPPT 238 (303)
T ss_dssp CBTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS----------CCCC
T ss_pred cCccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcC----------CCCC
Confidence 43322 12223445678899988888999999999999999999999999765433222211110 1122
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
+...++.+ +.+++.+||+.||++|||+.|+++|+|+.....
T Consensus 239 ~~~~~~~~----l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~ 279 (303)
T 3a7i_A 239 LEGNYSKP----LKEFVEACLNKEPSFRPTAKELLKHKFILRNAK 279 (303)
T ss_dssp CCSSCCHH----HHHHHHHHCCSSGGGSCCHHHHTTCHHHHHHCC
T ss_pred CccccCHH----HHHHHHHHcCCChhhCcCHHHHhhChhhhcCCC
Confidence 22334444 889999999999999999999999999976543
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-40 Score=372.48 Aligned_cols=253 Identities=18% Similarity=0.238 Sum_probs=206.5
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc---CCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS---KKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
.++|...+.||+|+||.||+|+.. +|+.||||++... .......+.+|++++++++|||||++++++.+.+
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~----- 257 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD----- 257 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCC-----
Confidence 466889999999999999999976 7999999999753 2344567889999999999999999999998643
Q ss_pred cceEEEEEeccCCCchhhhhcCCC-CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPG-YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
..++||||+++|+|.+++...+ ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 258 --~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGl 332 (576)
T 2acx_A 258 --ALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGL 332 (576)
T ss_dssp --EEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTT
T ss_pred --EEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEeccc
Confidence 4899999999999999997543 3589999999999999999999999 999999999999999999999999999
Q ss_pred chhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchh----HHHHhhhhhccccccccc
Q 004195 634 PLLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVV----VLVKDLLQVNIGTDEARK 708 (769)
Q Consensus 634 a~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~----~~~~~~~~~~~~~~~~~~ 708 (769)
++....... ....++..|++||.+.+..++.++|||||||++|||++|++||..... ..+...+..
T Consensus 333 a~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~--------- 403 (576)
T 2acx_A 333 AVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE--------- 403 (576)
T ss_dssp CEECCTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHH---------
T ss_pred ceecccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhc---------
Confidence 976543322 223455678889999888899999999999999999999999976421 111111110
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCC-----CHHHHHHHhHhhh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRP-----SVEDTLWNLQFAT 756 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~~~~ 756 (769)
....+...++ .++.+++.+||+.||++|| +++||++|+||..
T Consensus 404 --~~~~~p~~~s----~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~ 450 (576)
T 2acx_A 404 --VPEEYSERFS----PQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450 (576)
T ss_dssp --CCCCCCTTSC----HHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTT
T ss_pred --ccccCCccCC----HHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhcc
Confidence 0111112233 3489999999999999999 8999999999975
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-40 Score=353.16 Aligned_cols=267 Identities=19% Similarity=0.334 Sum_probs=200.7
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
++|+..+.||+|+||.||+|+.. +|+.||||++....... .+.+.+|++++++++||||++++++|.+..
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------- 97 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKK------- 97 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-------
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCC-------
Confidence 46888999999999999999976 59999999987543322 345788999999999999999999998643
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 98 ~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 173 (331)
T 4aaa_A 98 RWYLVFEFVDHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFART 173 (331)
T ss_dssp EEEEEEECCSEEHHHHHHHSTT-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC--
T ss_pred EEEEEEecCCcchHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCcee
Confidence 4899999999999998876544 699999999999999999999999 999999999999999999999999999976
Q ss_pred hhccC--CcceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccccc--------
Q 004195 637 AEARG--KGSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTD-------- 704 (769)
Q Consensus 637 ~~~~~--~~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~-------- 704 (769)
..... .....++..|++||.+.+. .++.++|||||||++|||+||++||....... ...+........
T Consensus 174 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (331)
T 4aaa_A 174 LAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFN 253 (331)
T ss_dssp ----------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHH
T ss_pred ecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhh
Confidence 54322 1223345567889987664 68999999999999999999999997654322 111111100000
Q ss_pred --cccccccCccccCCCC-----HHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 705 --EARKSIVDPAVMNECS-----DESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 705 --~~~~~~~d~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
........+......+ +.....+.+++.+||+.||++|||++|+++|+||...
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 313 (331)
T 4aaa_A 254 KNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMD 313 (331)
T ss_dssp HCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHGG
T ss_pred hccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhccC
Confidence 0001111111111111 1223458999999999999999999999999999754
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-40 Score=340.92 Aligned_cols=256 Identities=19% Similarity=0.252 Sum_probs=203.8
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
.++|+..+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|+.++++++||||+++++++.+..
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------- 78 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN------- 78 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT-------
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCC-------
Confidence 457888999999999999999976 799999999975533 33467899999999999999999999997643
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++||||+++++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||.+..
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 154 (276)
T 2yex_A 79 IQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATV 154 (276)
T ss_dssp EEEEEEECCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEEEecCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccc
Confidence 4899999999999999998554 689999999999999999999998 999999999999999999999999999865
Q ss_pred hhccC----CcceeecCCCcchhhhccCCC-CCCCCeeehhHHHHHHHhCCCCCCCchhH--HHHhhhhhcccccccccc
Q 004195 637 AEARG----KGSAEVSSPAKKTSVLARTEQ-DDKSDVYDIGIILIEIIVGRPITSENVVV--LVKDLLQVNIGTDEARKS 709 (769)
Q Consensus 637 ~~~~~----~~~~~~~~~~~~pe~~~~~~~-~~ksDVwS~Gvil~elltG~~p~~~~~~~--~~~~~~~~~~~~~~~~~~ 709 (769)
..... .....++..|.+||...+..+ +.++||||||+++|||+||+.||...... ....+.....
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-------- 226 (276)
T 2yex_A 155 FRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT-------- 226 (276)
T ss_dssp CEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCT--------
T ss_pred cCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhccc--------
Confidence 43221 122234456788998876665 77999999999999999999999754321 1111111000
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 710 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
.. ......++ .+.+++.+||+.||++|||++|+++|+||.....
T Consensus 227 ~~--~~~~~~~~----~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 270 (276)
T 2yex_A 227 YL--NPWKKIDS----APLALLHKILVENPSARITIPDIKKDRWYNKPLK 270 (276)
T ss_dssp TS--TTGGGSCH----HHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred cc--CchhhcCH----HHHHHHHHHCCCCchhCCCHHHHhcCccccChhh
Confidence 00 00112333 4889999999999999999999999999975543
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-39 Score=342.29 Aligned_cols=256 Identities=17% Similarity=0.247 Sum_probs=198.0
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
.|.....||+|+||.||+|+.. +++.||||.+........+.+.+|+.++++++||||+++++++.+.+ ..+
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-------~~~ 95 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENG-------FIK 95 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETT-------EEE
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCC-------cEE
Confidence 3555679999999999999965 68999999998665555678999999999999999999999997643 489
Q ss_pred EEEeccCCCchhhhhcCC--CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC-CceeeecCCCCchh
Q 004195 560 LIFEYAPNETLRSFISGP--GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE-NFHVKINSYNLPLL 636 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~-~~~~kl~DFGla~~ 636 (769)
+||||+++++|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+++.
T Consensus 96 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~ 172 (295)
T 2clq_A 96 IFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKR 172 (295)
T ss_dssp EEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEE
T ss_pred EEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccc
Confidence 999999999999999743 23567899999999999999999999 9999999999999987 89999999999865
Q ss_pred hhccC--CcceeecCCCcchhhhccC--CCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccC
Q 004195 637 AEARG--KGSAEVSSPAKKTSVLART--EQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVD 712 (769)
Q Consensus 637 ~~~~~--~~~~~~~~~~~~pe~~~~~--~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 712 (769)
..... .....++..|.+||..... .++.++|||||||++|||+||+.||................ ...
T Consensus 173 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~--------~~~ 244 (295)
T 2clq_A 173 LAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMF--------KVH 244 (295)
T ss_dssp SCC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHH--------CCC
T ss_pred cCCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccc--------ccc
Confidence 43221 1222344567889887654 38899999999999999999999986432211111000000 011
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 713 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
+.+...+++ ++.+++.+||+.||++|||++|+++|+|+....
T Consensus 245 ~~~~~~~~~----~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~ 286 (295)
T 2clq_A 245 PEIPESMSA----EAKAFILKCFEPDPDKRACANDLLVDEFLKVSS 286 (295)
T ss_dssp CCCCTTSCH----HHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC--
T ss_pred ccccccCCH----HHHHHHHHHccCChhhCCCHHHHhcChhhhhcc
Confidence 222233344 488999999999999999999999999997544
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-39 Score=351.09 Aligned_cols=259 Identities=15% Similarity=0.285 Sum_probs=204.8
Q ss_pred HHHHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC--------hhHHHHHHHHHhhc-cCCceeeEee
Q 004195 474 ELKEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS--------PHMYTYHIELISKL-RHSNLVSALG 543 (769)
Q Consensus 474 el~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~--------~~~~~~Ei~~l~~l-~H~nIv~l~~ 543 (769)
......++|...+.||+|+||.||+|+.. +|+.||||+++...... .+.+.+|+.+++++ +||||+++++
T Consensus 88 ~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 167 (365)
T 2y7j_A 88 AAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLID 167 (365)
T ss_dssp HHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred hhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence 34556678999999999999999999986 79999999997553211 24578899999999 7999999999
Q ss_pred eeeccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC
Q 004195 544 HCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN 623 (769)
Q Consensus 544 ~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~ 623 (769)
++.... ..++||||+++++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.+
T Consensus 168 ~~~~~~-------~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~ 236 (365)
T 2y7j_A 168 SYESSS-------FMFLVFDLMRKGELFDYLTEKV-ALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDN 236 (365)
T ss_dssp EEEBSS-------EEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTT
T ss_pred EEeeCC-------EEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCC
Confidence 987633 4899999999999999997443 689999999999999999999998 99999999999999999
Q ss_pred ceeeecCCCCchhhhccCC-cceeecCCCcchhhhcc------CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhh
Q 004195 624 FHVKINSYNLPLLAEARGK-GSAEVSSPAKKTSVLAR------TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDL 696 (769)
Q Consensus 624 ~~~kl~DFGla~~~~~~~~-~~~~~~~~~~~pe~~~~------~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~ 696 (769)
+.+||+|||++........ ....++..|++||.+.+ ..++.++|||||||++|||+||+.||...........
T Consensus 237 ~~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~ 316 (365)
T 2y7j_A 237 MQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRM 316 (365)
T ss_dssp CCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred CCEEEEecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence 9999999999865543322 22344556788988753 3588999999999999999999999976543322221
Q ss_pred h-hhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 697 L-QVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 697 ~-~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
+ ...... ........++ .+.+++.+||+.||++|||++|+++|+||.
T Consensus 317 i~~~~~~~--------~~~~~~~~~~----~~~~li~~~L~~dP~~Rps~~ell~hp~f~ 364 (365)
T 2y7j_A 317 IMEGQYQF--------SSPEWDDRSS----TVKDLISRLLQVDPEARLTAEQALQHPFFE 364 (365)
T ss_dssp HHHTCCCC--------CHHHHSSSCH----HHHHHHHHHSCSSTTTSCCHHHHHHSGGGC
T ss_pred HHhCCCCC--------CCcccccCCH----HHHHHHHHHcCCChhHCcCHHHHhcCcccC
Confidence 1 111100 0001112233 488999999999999999999999999985
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-40 Score=371.13 Aligned_cols=252 Identities=22% Similarity=0.325 Sum_probs=204.4
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
.++|...+.||+|+||.||+|++. ++..||||.++... ...++|.+|++++++++|||||+++++|.+...
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~------- 290 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP------- 290 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS-------
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCc-------
Confidence 345778899999999999999987 48899999997543 346789999999999999999999999976433
Q ss_pred EEEEEeccCCCchhhhhcC-CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 558 IYLIFEYAPNETLRSFISG-PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
.++|||||++|+|.++++. ....+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 291 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~ 367 (495)
T 1opk_A 291 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRL 367 (495)
T ss_dssp CEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEEC
T ss_pred EEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeeccccee
Confidence 7999999999999999973 334689999999999999999999999 999999999999999999999999999976
Q ss_pred hhccCC---cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccC
Q 004195 637 AEARGK---GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVD 712 (769)
Q Consensus 637 ~~~~~~---~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 712 (769)
...... .....+..|++||.+....++.++|||||||++|||+| |+.||.......+...+.... .
T Consensus 368 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~----------~ 437 (495)
T 1opk_A 368 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY----------R 437 (495)
T ss_dssp CTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC----------C
T ss_pred ccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC----------C
Confidence 543221 11122345788999888889999999999999999999 999987654333322222111 1
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 713 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
......+++ .+.+++.+||+.||++|||+.|+++.+...
T Consensus 438 ~~~~~~~~~----~l~~li~~cl~~dP~~RPs~~el~~~L~~~ 476 (495)
T 1opk_A 438 MERPEGCPE----KVYELMRACWQWNPSDRPSFAEIHQAFETM 476 (495)
T ss_dssp CCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred CCCCCCCCH----HHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 111123343 488999999999999999999999998754
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=356.78 Aligned_cols=269 Identities=18% Similarity=0.249 Sum_probs=204.5
Q ss_pred cCCCCcCccccCCceeEEEEEe-----CCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKL-----TDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~-----~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
++|+..+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++...+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----- 97 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPG----- 97 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCC-----
Confidence 4677889999999999999984 368899999998654444567899999999999999999999987432
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
....++||||+++|+|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 98 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 174 (327)
T 3lxl_A 98 RQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLA 174 (327)
T ss_dssp SCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGC
T ss_pred CceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccc
Confidence 3458999999999999999985444699999999999999999999998 9999999999999999999999999999
Q ss_pred hhhhccCC-----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhh-ccccccccc
Q 004195 635 LLAEARGK-----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQV-NIGTDEARK 708 (769)
Q Consensus 635 ~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~-~~~~~~~~~ 708 (769)
+....... ....++..|++||.+.+..++.++|||||||++|||+||+.|+.............. .........
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (327)
T 3lxl_A 175 KLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLL 254 (327)
T ss_dssp EECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHH
T ss_pred eecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHH
Confidence 76543221 111223347889998888889999999999999999999999875443322111000 000000011
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
+..........+......+.+++.+||+.||++|||++|++++++...
T Consensus 255 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 302 (327)
T 3lxl_A 255 ELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLW 302 (327)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-
T ss_pred HHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 111111111122223344899999999999999999999999998653
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-40 Score=341.63 Aligned_cols=259 Identities=19% Similarity=0.261 Sum_probs=204.3
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.++|+..+.||+|+||.||+|+.. +|+.||+|++...... ..+.+.+|++++++++||||+++++++.+.. .
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~ 79 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRT-----N 79 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGG-----G
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCC-----C
Confidence 357888999999999999999976 7999999999754322 2356889999999999999999999886422 2
Q ss_pred ceEEEEEeccCCCchhhhhcC---CCCCCCHHHHHHHHHHHHHHhcccccCCCCC-----ccccCccccceeeCCCceee
Q 004195 556 SIIYLIFEYAPNETLRSFISG---PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPG-----VFSNNLKITDVLLDENFHVK 627 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-----ivHrDlKp~NILld~~~~~k 627 (769)
...++||||+++|+|.+++.. ....+++..+..++.|+++||+|||+. + |+||||||+||+++.++.+|
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~k 156 (279)
T 2w5a_A 80 TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVK 156 (279)
T ss_dssp TEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEE
T ss_pred ceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEE
Confidence 348999999999999999973 233589999999999999999999998 6 99999999999999999999
Q ss_pred ecCCCCchhhhccCC--cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccc
Q 004195 628 INSYNLPLLAEARGK--GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDE 705 (769)
Q Consensus 628 l~DFGla~~~~~~~~--~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (769)
|+|||+++....... ....++..|++||...+..++.++||||||+++|||+||+.||...........+....
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~---- 232 (279)
T 2w5a_A 157 LGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK---- 232 (279)
T ss_dssp ECCCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC----
T ss_pred EecCchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcc----
Confidence 999999876543221 11234556888999888889999999999999999999999997654333222221110
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 706 ARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 706 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
.+.+...+++ ++.+++.+||+.||++|||++|+++++|+.+..+
T Consensus 233 ------~~~~~~~~~~----~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~ 276 (279)
T 2w5a_A 233 ------FRRIPYRYSD----ELNEIITRMLNLKDYHRPSVEEILENPLILEHHH 276 (279)
T ss_dssp ------CCCCCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGGS
T ss_pred ------cccCCcccCH----HHHHHHHHHcCCCcccCCCHHHHHhChhhhhhcc
Confidence 0111223343 4889999999999999999999999999886644
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=349.93 Aligned_cols=274 Identities=17% Similarity=0.274 Sum_probs=203.7
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC--CChhHHHHHHHHHhhccCCceeeEeeeeeccCCC-CCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK--SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLD-DPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~-~~~~ 555 (769)
++|...+.||+|+||.||+|+.. +|+.||||++..... .....+.+|++++++++||||+++++++.+.... ....
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 57888999999999999999975 799999999975532 2245788999999999999999999999764321 1113
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
+..++||||++ |+|.+.+......+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 97 ~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 172 (351)
T 3mi9_A 97 GSIYLVFDFCE-HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 172 (351)
T ss_dssp CEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred ceEEEEEeccC-CCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence 46899999997 588888876655799999999999999999999999 99999999999999999999999999996
Q ss_pred hhhccC------CcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccc-ccc-c
Q 004195 636 LAEARG------KGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIG-TDE-A 706 (769)
Q Consensus 636 ~~~~~~------~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~-~~~-~ 706 (769)
...... .....++..|++||.+.+ ..++.++|||||||++|||+||++||...........+..... ... .
T Consensus 173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 252 (351)
T 3mi9_A 173 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV 252 (351)
T ss_dssp ECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTT
T ss_pred cccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhh
Confidence 543211 122233456788998765 4589999999999999999999999987554332222211111 110 1
Q ss_pred cccccCcccc--------CCCC-HHH------HHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 707 RKSIVDPAVM--------NECS-DES------LKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 707 ~~~~~d~~~~--------~~~~-~~~------~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
+....+.... .... .+. ...+.+++.+||+.||++|||++|+++|+||...
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 318 (351)
T 3mi9_A 253 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD 318 (351)
T ss_dssp STTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSS
T ss_pred ccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCC
Confidence 1110000000 0000 011 2348899999999999999999999999999753
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-40 Score=350.38 Aligned_cols=259 Identities=11% Similarity=0.063 Sum_probs=201.9
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCCcc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
.++|...+.||+|+||.||+|+.. +|+.||||++.... ..+.+.+|+++++++ +||||+++++++.+..
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~------- 78 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGK------- 78 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETT-------
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCC-------
Confidence 356888999999999999999964 79999999987543 235689999999999 9999999999988643
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCce-----eeecCC
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH-----VKINSY 631 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~-----~kl~DF 631 (769)
..++||||+ +++|.+++......+++..+..++.|+++||+|||+. +|+||||||+|||++.++. +||+||
T Consensus 79 ~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DF 154 (330)
T 2izr_A 79 YNAMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDF 154 (330)
T ss_dssp EEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCC
T ss_pred ccEEEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEc
Confidence 489999999 8999999985445799999999999999999999999 9999999999999999887 999999
Q ss_pred CCchhhhccCC---------cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccc
Q 004195 632 NLPLLAEARGK---------GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIG 702 (769)
Q Consensus 632 Gla~~~~~~~~---------~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~ 702 (769)
|+++....... ....++..|++||.+.+..++.++|||||||++|||+||+.||.................
T Consensus 155 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~ 234 (330)
T 2izr_A 155 ALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGD 234 (330)
T ss_dssp TTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHH
T ss_pred ccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHh
Confidence 99975433221 233456678889999888999999999999999999999999976322111111110000
Q ss_pred cccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 703 TDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 703 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
.. .....+.....+ + ++.+++.+||+.||.+||++++|.+.+....+.
T Consensus 235 ~~---~~~~~~~~~~~~----p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~ 282 (330)
T 2izr_A 235 TK---RATPIEVLCENF----P-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR 282 (330)
T ss_dssp HH---HHSCHHHHTTTC----H-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred hh---ccCCHHHHhccC----h-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence 00 000000001111 1 589999999999999999999999988755443
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-41 Score=366.87 Aligned_cols=257 Identities=11% Similarity=0.114 Sum_probs=193.3
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHH---HHHhhccCCceeeEe-------ee
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHI---ELISKLRHSNLVSAL-------GH 544 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei---~~l~~l~H~nIv~l~-------~~ 544 (769)
.++|...+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+ +++++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 456888899999999999999964 79999999997542 22346788999 555666899999998 55
Q ss_pred eeccCC--------CCCCc--ceEEEEEeccCCCchhhhhcCC------CCCCCHHHHHHHHHHHHHHhcccccCCCCCc
Q 004195 545 CLDFSL--------DDPSI--SIIYLIFEYAPNETLRSFISGP------GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608 (769)
Q Consensus 545 ~~~~~~--------~~~~~--~~~~lV~Ey~~~gsL~~~l~~~------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i 608 (769)
+.+.+. ++... ...++||||+ +|+|.+++... ...++|..+..|+.||++||+|||+. +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 443221 00000 1378999999 68999999732 12355788999999999999999999 99
Q ss_pred cccCccccceeeCCCceeeecCCCCchhhhccCCcceeecCCCcchhhhccC-----------CCCCCCCeeehhHHHHH
Q 004195 609 FSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLART-----------EQDDKSDVYDIGIILIE 677 (769)
Q Consensus 609 vHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~~-----------~~~~ksDVwS~Gvil~e 677 (769)
+||||||+|||++.++.+||+|||+++...... ....+ ..|++||.+.+. .++.++|||||||++||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~-~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~e 305 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARV-VSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYW 305 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTCEE-ECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCCcc-cCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHH
Confidence 999999999999999999999999997543322 22233 778889998877 79999999999999999
Q ss_pred HHhCCCCCCCchhHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 678 IIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 678 lltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
|+||+.||.......... .+.. ....++++ +.+++.+||+.||++|||+.|+++|+||...
T Consensus 306 lltg~~Pf~~~~~~~~~~-------------~~~~--~~~~~~~~----~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~ 366 (377)
T 3byv_A 306 IWCADLPITKDAALGGSE-------------WIFR--SCKNIPQP----VRALLEGFLRYPKEDRLLPLQAMETPEYEQL 366 (377)
T ss_dssp HHHSSCCC------CCSG-------------GGGS--SCCCCCHH----HHHHHHHHTCSSGGGCCCHHHHHTSHHHHHH
T ss_pred HHHCCCCCcccccccchh-------------hhhh--hccCCCHH----HHHHHHHHcCCCchhCCCHHHHhhChHHHHH
Confidence 999999996543211111 0000 01233443 8899999999999999999999999999865
Q ss_pred hcc
Q 004195 758 IQG 760 (769)
Q Consensus 758 ~~~ 760 (769)
.+.
T Consensus 367 ~~~ 369 (377)
T 3byv_A 367 RTE 369 (377)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=361.59 Aligned_cols=272 Identities=17% Similarity=0.194 Sum_probs=200.5
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhc------cCCceeeEeeeeeccCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKL------RHSNLVSALGHCLDFSLD 551 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l------~H~nIv~l~~~~~~~~~~ 551 (769)
..+|+..+.||+|+||.||+|+.. +++.||||+++... ...+.+.+|+++++.+ .|+||+++++++....
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~-- 172 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN-- 172 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT--
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC--
Confidence 456888999999999999999876 68999999997431 2235678899998887 4679999999998643
Q ss_pred CCCcceEEEEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCce--eee
Q 004195 552 DPSISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH--VKI 628 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~--~kl 628 (769)
..++||||++ ++|.+++... ...+++..+..++.||++||+|||+. +|+||||||+|||++.++. +||
T Consensus 173 -----~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL 243 (429)
T 3kvw_A 173 -----HICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKV 243 (429)
T ss_dssp -----EEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEE
T ss_pred -----eEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEE
Confidence 4899999996 6999988743 24589999999999999999999998 9999999999999999887 999
Q ss_pred cCCCCchhhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccccc-cc
Q 004195 629 NSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTD-EA 706 (769)
Q Consensus 629 ~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~-~~ 706 (769)
+|||+++...... ....++..|++||.+.+..++.++|||||||++|||+||++||....... +..+... .... ..
T Consensus 244 ~DFG~a~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~-~~~p~~~ 321 (429)
T 3kvw_A 244 IDFGSSCYEHQRV-YTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIEL-LGMPSQK 321 (429)
T ss_dssp CCCTTCEETTCCC-CSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH-HCCCCHH
T ss_pred eecccceecCCcc-cccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH-cCCCCHH
Confidence 9999996554322 23344566889999988899999999999999999999999997654322 2221111 1100 00
Q ss_pred c-------ccccC--------------------------------ccccCC----CCHHHHHHHHHHHHHcCcCCCCCCC
Q 004195 707 R-------KSIVD--------------------------------PAVMNE----CSDESLKRMMELCLRCLSNEPKDRP 743 (769)
Q Consensus 707 ~-------~~~~d--------------------------------~~~~~~----~~~~~~~~l~~li~~cl~~dP~~RP 743 (769)
+ ...++ +..... ........+.+|+.+||+.||++||
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rp 401 (429)
T 3kvw_A 322 LLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRM 401 (429)
T ss_dssp HHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSC
T ss_pred HHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCC
Confidence 0 00000 000000 0001134588999999999999999
Q ss_pred CHHHHHHHhHhhhhhcccccc
Q 004195 744 SVEDTLWNLQFATQIQGLKEN 764 (769)
Q Consensus 744 s~~evl~~l~~~~~~~~~~~~ 764 (769)
|++|+++|+|+....+.....
T Consensus 402 ta~e~L~Hpw~~~~~~~~~~~ 422 (429)
T 3kvw_A 402 TPGQALRHPWLRRRLPKPPTG 422 (429)
T ss_dssp CHHHHHTSTTTC---------
T ss_pred CHHHHhCChhhccCCCCCCcc
Confidence 999999999998776544433
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-39 Score=348.07 Aligned_cols=260 Identities=15% Similarity=0.207 Sum_probs=200.6
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhcc-CCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLR-HSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|+..+.||+|+||.||+|+.. +++.||||+++. ...+.+.+|++++++++ ||||+++++++.+.. ...
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~-----~~~ 107 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP---VKKKKIKREIKILENLRGGPNIITLADIVKDPV-----SRT 107 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTT-----TCC
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc---cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCC-----CCc
Confidence 56888999999999999999964 799999999873 34578999999999997 999999999997632 234
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc-eeeecCCCCchh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF-HVKINSYNLPLL 636 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~-~~kl~DFGla~~ 636 (769)
.++||||+++++|.+++. .+++..+..++.|+++||+|||+. +|+||||||+|||++.++ .+||+|||+++.
T Consensus 108 ~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~ 180 (330)
T 3nsz_A 108 PALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 180 (330)
T ss_dssp EEEEEECCCCCCHHHHGG----GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred eEEEEeccCchhHHHHHH----hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceE
Confidence 899999999999999986 488999999999999999999999 999999999999999776 899999999976
Q ss_pred hhccCC-cceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCch--hHHHHhhhhh-------------
Q 004195 637 AEARGK-GSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENV--VVLVKDLLQV------------- 699 (769)
Q Consensus 637 ~~~~~~-~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~--~~~~~~~~~~------------- 699 (769)
...... ....++..|++||.+.+ ..++.++|||||||++|||+||+.||.... ..........
T Consensus 181 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 260 (330)
T 3nsz_A 181 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY 260 (330)
T ss_dssp CCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHT
T ss_pred cCCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHh
Confidence 543322 22334456778988766 668999999999999999999999885322 1111111100
Q ss_pred ccccc------------cccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 700 NIGTD------------EARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 700 ~~~~~------------~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
..... ..+......... .....++.+++.+||+.||++|||++|+++|+||....
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~ 327 (330)
T 3nsz_A 261 NIELDPRFNDILGRHSRKRWERFVHSENQ----HLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 327 (330)
T ss_dssp TCCCCTHHHHHHCCCCCCCGGGGCCTTTG----GGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred ccccccchhhhhhhccccchhhhcccccc----ccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhc
Confidence 00000 001111111111 11234589999999999999999999999999998543
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-39 Score=350.77 Aligned_cols=270 Identities=16% Similarity=0.243 Sum_probs=198.9
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.++|...+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++||||+++++++...... ...
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~-~~~ 102 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETL-DDF 102 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSST-TTC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCcc-ccC
Confidence 457888999999999999999975 7999999999654322 135688999999999999999999999764321 112
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
...++||||+ +++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 176 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLAR 176 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred ceEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeeccc
Confidence 3469999999 78999999753 589999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccCCcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhcccccccc-cc---
Q 004195 636 LAEARGKGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIGTDEAR-KS--- 709 (769)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~~~~~~-~~--- 709 (769)
..... .....++..|++||.+.+ ..++.++||||+||++|||++|++||.+.... ....+........... ..
T Consensus 177 ~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~ 255 (367)
T 1cm8_A 177 QADSE-MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQS 255 (367)
T ss_dssp ECCSS-CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSC
T ss_pred ccccc-cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhh
Confidence 65432 222334556788998776 67999999999999999999999999765432 2222221111100000 00
Q ss_pred ------------ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 710 ------------IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 710 ------------~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.....+ ....+.....+.+++.+||+.||++|||++|+++|+||..-
T Consensus 256 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~ 314 (367)
T 1cm8_A 256 DEAKNYMKGLPELEKKDF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL 314 (367)
T ss_dssp HHHHHHHHHSCCCCCCCG-GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred HHHHHHHHhCCCCCCCCH-HHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhh
Confidence 000000 01111223448899999999999999999999999999753
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-39 Score=354.84 Aligned_cols=268 Identities=11% Similarity=0.111 Sum_probs=201.1
Q ss_pred hcCCCCcCccccCCceeEEEEEeCC------CcEEEEEEccccCCC-----------ChhHHHHHHHHHhhccCCceeeE
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLTD------GTLVAIRSLKMSKKS-----------SPHMYTYHIELISKLRHSNLVSA 541 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~~------g~~vAvK~~~~~~~~-----------~~~~~~~Ei~~l~~l~H~nIv~l 541 (769)
.++|...+.||+|+||.||+|++.+ ++.||||++...... ....+..|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4578899999999999999999754 478999998644210 11223345556677789999999
Q ss_pred eeeeeccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeC
Q 004195 542 LGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD 621 (769)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld 621 (769)
++++.+... .....++||||+ +++|.+++......+++..+..|+.|++.||+|||+. +|+||||||+|||++
T Consensus 114 ~~~~~~~~~---~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~ 186 (364)
T 3op5_A 114 WGSGLHDKN---GKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLN 186 (364)
T ss_dssp EEEEEEEET---TEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEE
T ss_pred EeeeeeccC---CcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEe
Confidence 999976422 234589999999 9999999986655799999999999999999999999 999999999999998
Q ss_pred --CCceeeecCCCCchhhhccCC---------cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchh
Q 004195 622 --ENFHVKINSYNLPLLAEARGK---------GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVV 690 (769)
Q Consensus 622 --~~~~~kl~DFGla~~~~~~~~---------~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~ 690 (769)
.++.+||+|||+++....... ....++..|++||.+.+..++.++|||||||++|||+||+.||.....
T Consensus 187 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~ 266 (364)
T 3op5_A 187 YKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLK 266 (364)
T ss_dssp SSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT
T ss_pred cCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccccc
Confidence 889999999999965533221 122256678899999888899999999999999999999999975321
Q ss_pred H-HHHhhhhhccccccccccccCcccc-CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 691 V-LVKDLLQVNIGTDEARKSIVDPAVM-NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 691 ~-~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
. ........ .......++.++.+. ..+++ ++.+++.+||+.||++||+++++++.+....+..
T Consensus 267 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~ 331 (364)
T 3op5_A 267 DPKYVRDSKI--RYRENIASLMDKCFPAANAPG----EIAKYMETVKLLDYTEKPLYENLRDILLQGLKAI 331 (364)
T ss_dssp CHHHHHHHHH--HHHHCHHHHHHHHSCTTCCCH----HHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHH--HhhhhHHHHHHHhcccccCHH----HHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Confidence 1 11111111 011112222222221 23344 4889999999999999999999999988665433
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-40 Score=344.06 Aligned_cols=249 Identities=16% Similarity=0.233 Sum_probs=198.8
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CC-------cEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DG-------TLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLD 551 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g-------~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~ 551 (769)
++|...+.||+|+||+||+|+.. ++ ..||+|++........+.+.+|++++++++||||+++++++.+.+.
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~- 86 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE- 86 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC-
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC-
Confidence 46788899999999999999865 34 4799999976655566789999999999999999999999986443
Q ss_pred CCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCce------
Q 004195 552 DPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH------ 625 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~------ 625 (769)
.++||||+++|+|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.
T Consensus 87 ------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~ 157 (289)
T 4fvq_A 87 ------NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNP 157 (289)
T ss_dssp ------CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBC
T ss_pred ------CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCccccccc
Confidence 6999999999999999986655699999999999999999999999 9999999999999988877
Q ss_pred --eeecCCCCchhhhccCCcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCC-CCCCCchhHHHHhhhhhcc
Q 004195 626 --VKINSYNLPLLAEARGKGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGR-PITSENVVVLVKDLLQVNI 701 (769)
Q Consensus 626 --~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~-~p~~~~~~~~~~~~~~~~~ 701 (769)
+||+|||++...... ....++..|++||.+.+ ..++.++|||||||++|||+||. +|+...............
T Consensus 158 ~~~kl~Dfg~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~- 234 (289)
T 4fvq_A 158 PFIKLSDPGISITVLPK--DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDR- 234 (289)
T ss_dssp CEEEECCCCSCTTTSCH--HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT-
T ss_pred ceeeeccCcccccccCc--cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhcc-
Confidence 999999998654322 12234556888998876 67899999999999999999954 555443332222211110
Q ss_pred ccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 702 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
+......+ .++.+++.+||+.||++|||+.|+++++....
T Consensus 235 -----------~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~ 274 (289)
T 4fvq_A 235 -----------HQLPAPKA----AELANLINNCMDYEPDHRPSFRAIIRDLNSLF 274 (289)
T ss_dssp -----------CCCCCCSS----CTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC
T ss_pred -----------CCCCCCCC----HHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence 01111112 23789999999999999999999999998653
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-39 Score=365.62 Aligned_cols=256 Identities=19% Similarity=0.235 Sum_probs=200.9
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC--CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK--KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.+.|...+.||+|+||+||+|+.. ++..||||++.... ......+.+|+.++++++|||||+++++|.+..
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~------ 109 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKR------ 109 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSS------
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC------
Confidence 446888999999999999999976 78999999997653 233567899999999999999999999998643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC---CceeeecCCC
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE---NFHVKINSYN 632 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---~~~~kl~DFG 632 (769)
..++|||||++|+|.+.+.... .+++..+..++.|+++||+|||+. +|+||||||+|||++. ++.+||+|||
T Consensus 110 -~~~lv~e~~~~g~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG 184 (494)
T 3lij_A 110 -NYYLVMECYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFG 184 (494)
T ss_dssp -EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred -EEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECC
Confidence 4899999999999999887443 689999999999999999999999 9999999999999976 4559999999
Q ss_pred CchhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccccccc
Q 004195 633 LPLLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIV 711 (769)
Q Consensus 633 la~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (769)
+++....... ....++..|++||.+. ..++.++||||+||++|||++|++||...........+..... . .
T Consensus 185 ~a~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~------~-~ 256 (494)
T 3lij_A 185 LSAVFENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKY------T-F 256 (494)
T ss_dssp TCEECBTTBCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC------C-C
T ss_pred CCeECCCCccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC------C-C
Confidence 9976543322 2334556778899774 6799999999999999999999999987554333222211100 0 1
Q ss_pred CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 712 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
+.......++ .+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 257 ~~~~~~~~s~----~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~ 298 (494)
T 3lij_A 257 DSPEWKNVSE----GAKDLIKQMLQFDSQRRISAQQALEHPWIKEM 298 (494)
T ss_dssp CSGGGTTSCH----HHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred CchhcccCCH----HHHHHHHHHCCCChhhCccHHHHhcCcccccC
Confidence 1111123333 38899999999999999999999999999764
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-39 Score=346.14 Aligned_cols=255 Identities=22% Similarity=0.313 Sum_probs=202.1
Q ss_pred hcCCCCcCccccCCceeEEEEEe------CCCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKL------TDGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLD 551 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~ 551 (769)
.++|...+.||+|+||.||+|+. .+++.||||+++.... ...+.+.+|++++++++||||+++++++.+.+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~- 100 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP- 100 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS-
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc-
Confidence 45688889999999999999985 2458999999975422 223578899999999999999999999976443
Q ss_pred CCCcceEEEEEeccCCCchhhhhcCCC-----------------------CCCCHHHHHHHHHHHHHHhcccccCCCCCc
Q 004195 552 DPSISIIYLIFEYAPNETLRSFISGPG-----------------------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~-----------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i 608 (769)
.++||||+++|+|.+++.... ..+++.++..++.|+++||+|||+. +|
T Consensus 101 ------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i 171 (314)
T 2ivs_A 101 ------LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KL 171 (314)
T ss_dssp ------CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred ------eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CC
Confidence 799999999999999997432 2489999999999999999999999 99
Q ss_pred cccCccccceeeCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCC
Q 004195 609 FSNNLKITDVLLDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRP 683 (769)
Q Consensus 609 vHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~ 683 (769)
+||||||+||+++.++.+||+|||+++....... .....+..|++||...+..++.++|||||||++|||+| |+.
T Consensus 172 vH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~ 251 (314)
T 2ivs_A 172 VHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN 251 (314)
T ss_dssp ECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCC
T ss_pred cccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999865533221 11122334788998888889999999999999999999 999
Q ss_pred CCCCchhHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 684 ITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 684 p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
||...........+.... .+.....+++ .+.+++.+||+.||++|||+.|+++++.....
T Consensus 252 p~~~~~~~~~~~~~~~~~----------~~~~~~~~~~----~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 252 PYPGIPPERLFNLLKTGH----------RMERPDNCSE----EMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp SSTTCCGGGHHHHHHTTC----------CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHhhcCC----------cCCCCccCCH----HHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 987654333322221110 1111223343 48899999999999999999999999986643
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-39 Score=337.76 Aligned_cols=254 Identities=16% Similarity=0.234 Sum_probs=200.7
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc---CCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS---KKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|...+.||+|+||.||+|+.. +|+.||||++... .....+.+.+|++++++++||||+++++++.+.+
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------ 84 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPT------ 84 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS------
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC------
Confidence 46888899999999999999976 7999999999653 2334567899999999999999999999997643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+++++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 85 -~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~ 159 (276)
T 2h6d_A 85 -DFFMVMEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSN 159 (276)
T ss_dssp -EEEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGG
T ss_pred -eEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeeccccc
Confidence 4899999999999999997543 689999999999999999999998 99999999999999999999999999987
Q ss_pred hhhccCC-cceeecCCCcchhhhccCCC-CCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCc
Q 004195 636 LAEARGK-GSAEVSSPAKKTSVLARTEQ-DDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 636 ~~~~~~~-~~~~~~~~~~~pe~~~~~~~-~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
....... ....++..|.+||...+..+ +.++||||||+++|||++|+.||...........+.... .
T Consensus 160 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-----------~ 228 (276)
T 2h6d_A 160 MMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGV-----------F 228 (276)
T ss_dssp CCCC-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC-----------C
T ss_pred ccCCCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCc-----------c
Confidence 6543221 22334556788998876655 689999999999999999999997654433222221110 0
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
......+. .+.+++.+||+.||++|||++|+++|+|+....+
T Consensus 229 ~~~~~~~~----~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~~~ 270 (276)
T 2h6d_A 229 YIPEYLNR----SVATLLMHMLQVDPLKRATIKDIREHEWFKQDLP 270 (276)
T ss_dssp CCCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTTCC
T ss_pred cCchhcCH----HHHHHHHHHccCChhhCCCHHHHHhChhhccCch
Confidence 11122333 4889999999999999999999999999986654
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-39 Score=344.04 Aligned_cols=256 Identities=17% Similarity=0.264 Sum_probs=200.1
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
..+.|+..+.||+|+||.||+|+.. +|+.||||.+... ...+.+.+|++++++++||||+++++++.+..
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------- 97 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNT------- 97 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT--SCCHHHHHHHHHHHTCCCTTBCCEEEEEEETT-------
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch--HHHHHHHHHHHHHHhCCCCCCccEEEEEEeCC-------
Confidence 4567889999999999999999976 6999999999754 24567999999999999999999999998633
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++||||+++|+|.+++......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 98 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 174 (314)
T 3com_A 98 DLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQ 174 (314)
T ss_dssp EEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchh
Confidence 48999999999999999974444799999999999999999999999 999999999999999999999999999865
Q ss_pred hhccC--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCcc
Q 004195 637 AEARG--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 637 ~~~~~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
..... .....++..|.+||......++.++||||||+++|||++|+.||................ . ....
T Consensus 175 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--~---~~~~--- 246 (314)
T 3com_A 175 LTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNP--P---PTFR--- 246 (314)
T ss_dssp CBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC--C---CCCS---
T ss_pred hhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCC--C---cccC---
Confidence 43321 122234456788999888889999999999999999999999997644322111111100 0 0000
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
....++ ..+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 247 ~~~~~~----~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~ 285 (314)
T 3com_A 247 KPELWS----DNFTDFVKQCLVKSPEQRATATQLLQHPFVRSA 285 (314)
T ss_dssp SGGGSC----HHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTC
T ss_pred CcccCC----HHHHHHHHHHccCChhhCcCHHHHHhCHHHhcC
Confidence 011223 348899999999999999999999999998643
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-39 Score=341.65 Aligned_cols=257 Identities=10% Similarity=0.051 Sum_probs=203.7
Q ss_pred cCCCCcCccccCCceeEEEEEe-CCCcEEEEEEccccCCCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKL-TDGTLVAIRSLKMSKKSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|...+.||+|+||.||+|+. .+|+.||||++... ...+.+.+|+.+++++ +|+|++++++++.+.. .
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~-------~ 80 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR--SDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGL-------H 80 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECC--TTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETT-------E
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccC--CccHHHHHHHHHHHHHhcCCCCCeEEeecCCCc-------e
Confidence 4688899999999999999996 47999999998643 2345689999999999 7999999999987533 4
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCce-----eeecCCC
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH-----VKINSYN 632 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~-----~kl~DFG 632 (769)
.++||||+ +++|.+++...+..+++..+..++.|+++||+|||+. +|+||||||+||+++.++. +||+|||
T Consensus 81 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg 156 (298)
T 1csn_A 81 NVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFG 156 (298)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCT
T ss_pred eEEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECc
Confidence 89999999 8999999986555799999999999999999999998 9999999999999987776 9999999
Q ss_pred CchhhhccCC---------cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchh----HHHHhhhhh
Q 004195 633 LPLLAEARGK---------GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVV----VLVKDLLQV 699 (769)
Q Consensus 633 la~~~~~~~~---------~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~----~~~~~~~~~ 699 (769)
+++....... ....++..|++||...+..++.++|||||||++|||+||+.||..... .........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 236 (298)
T 1csn_A 157 MVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEK 236 (298)
T ss_dssp TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHH
T ss_pred cccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhh
Confidence 9976543221 223345678889999888899999999999999999999999976321 111111111
Q ss_pred ccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcc
Q 004195 700 NIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQG 760 (769)
Q Consensus 700 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~ 760 (769)
... ...+.....+++ .+.+++.+||+.||++||++++|++.+....+..+
T Consensus 237 ~~~-------~~~~~~~~~~~~----~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 237 KQS-------TPLRELCAGFPE----EFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp HHH-------SCHHHHTTTSCH----HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred ccC-------ccHHHHHhhCcH----HHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 000 000111123343 48899999999999999999999999987755433
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-39 Score=371.54 Aligned_cols=246 Identities=17% Similarity=0.237 Sum_probs=197.5
Q ss_pred ccccCCceeEEEEEeC---CCcEEEEEEccccC-CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEEE
Q 004195 487 FMCDASHGQIYKGKLT---DGTLVAIRSLKMSK-KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIF 562 (769)
Q Consensus 487 ~iG~G~~g~Vy~~~~~---~g~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV~ 562 (769)
.||+|+||.||+|.+. ++..||||+++... ....+++.+|++++++++|||||+++++|.+. ..++||
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~--------~~~lv~ 414 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE--------ALMLVM 414 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESS--------SEEEEE
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccC--------CeEEEE
Confidence 7999999999999864 46689999998653 33467899999999999999999999999752 279999
Q ss_pred eccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhccCC
Q 004195 563 EYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGK 642 (769)
Q Consensus 563 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~ 642 (769)
|||++|+|.+++......+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 415 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~ 491 (613)
T 2ozo_A 415 EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDS 491 (613)
T ss_dssp ECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC----
T ss_pred EeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCc
Confidence 99999999999986666799999999999999999999999 999999999999999999999999999976533221
Q ss_pred -----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCcccc
Q 004195 643 -----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM 716 (769)
Q Consensus 643 -----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 716 (769)
....++..|++||.+....++.++|||||||++|||+| |+.||.......+...+.... .....
T Consensus 492 ~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~----------~~~~p 561 (613)
T 2ozo_A 492 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK----------RMECP 561 (613)
T ss_dssp ----------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTC----------CCCCC
T ss_pred eeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCC----------CCCCC
Confidence 11112346889999988899999999999999999998 999997654333333222110 11111
Q ss_pred CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 717 NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 717 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
..+++ ++.+++.+||+.||++||++.+|++.+...-.
T Consensus 562 ~~~~~----~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 598 (613)
T 2ozo_A 562 PECPP----ELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 598 (613)
T ss_dssp TTCCH----HHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CcCCH----HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 23444 48899999999999999999999988875533
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-39 Score=348.05 Aligned_cols=253 Identities=18% Similarity=0.285 Sum_probs=198.2
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcE----EEEEEccccC-CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTL----VAIRSLKMSK-KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~----vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
++|+..+.||+|+||.||+|+.. +++. ||+|.+.... ....+.+.+|+.++++++||||++++++|.+..
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~---- 90 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST---- 90 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS----
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC----
Confidence 46888999999999999999964 4554 5777775442 344678999999999999999999999998532
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
.++|+||+++|+|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 91 ----~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~ 163 (327)
T 3lzb_A 91 ----VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGL 163 (327)
T ss_dssp ----EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC
T ss_pred ----ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcc
Confidence 6899999999999999986555799999999999999999999999 999999999999999999999999999
Q ss_pred chhhhccCCcc----eeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccc
Q 004195 634 PLLAEARGKGS----AEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARK 708 (769)
Q Consensus 634 a~~~~~~~~~~----~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (769)
++......... ..++..|++||.+.+..++.++|||||||++|||+| |++||...........+....
T Consensus 164 a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~------- 236 (327)
T 3lzb_A 164 AKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE------- 236 (327)
T ss_dssp ----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC-------
T ss_pred eeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCC-------
Confidence 97654322211 112235788999988899999999999999999999 999998655443333222111
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.......++. .+.+++.+||+.||++|||+.|+++.+.....
T Consensus 237 ---~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 237 ---RLPQPPICTI----DVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp ---CCCCCTTBCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred ---CCCCCccCCH----HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 0111122333 48899999999999999999999999987653
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-39 Score=365.45 Aligned_cols=256 Identities=19% Similarity=0.252 Sum_probs=206.3
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
.++|...+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++.+..
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----- 99 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKG----- 99 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC-----
Confidence 356888999999999999999976 79999999996543 334577999999999999999999999998643
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceee---CCCceeeecCC
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLL---DENFHVKINSY 631 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl---d~~~~~kl~DF 631 (769)
..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+||
T Consensus 100 --~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Df 173 (484)
T 3nyv_A 100 --YFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDF 173 (484)
T ss_dssp --EEEEEECCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCT
T ss_pred --EEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEee
Confidence 4899999999999999997654 699999999999999999999999 99999999999999 56789999999
Q ss_pred CCchhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhc-ccccccccc
Q 004195 632 NLPLLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVN-IGTDEARKS 709 (769)
Q Consensus 632 Gla~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~-~~~~~~~~~ 709 (769)
|+++....... ....++..|++||.+.+ .++.++||||+||++|||++|++||...........+... ...
T Consensus 174 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~------ 246 (484)
T 3nyv_A 174 GLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTF------ 246 (484)
T ss_dssp THHHHBCCCCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC------
T ss_pred eeeEEcccccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCC------
Confidence 99976543332 22234566788998754 7999999999999999999999999865543332222111 110
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 710 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
+.......++ .+.+++.+||+.||++|||+.|+++|+|+....
T Consensus 247 --~~~~~~~~s~----~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~~ 289 (484)
T 3nyv_A 247 --ELPQWKKVSE----SAKDLIRKMLTYVPSMRISARDALDHEWIQTYT 289 (484)
T ss_dssp --CSGGGGGSCH----HHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHHT
T ss_pred --CCcccccCCH----HHHHHHHHHCCCChhHCcCHHHHhhChhhcccc
Confidence 0011112333 488999999999999999999999999997654
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=348.98 Aligned_cols=255 Identities=22% Similarity=0.291 Sum_probs=201.1
Q ss_pred hcCCCCcCccccCCceeEEEEEe------CCCcEEEEEEccccC-CCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKL------TDGTLVAIRSLKMSK-KSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSL 550 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~ 550 (769)
.++|...+.||+|+||.||+|+. .++..||||+++... ....+.+.+|+.+++++ +||||+++++++.+.+.
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 123 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP 123 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCc
Confidence 46788899999999999999995 246689999997542 23346799999999999 89999999999986443
Q ss_pred CCCCcceEEEEEeccCCCchhhhhcCCC----------------------CCCCHHHHHHHHHHHHHHhcccccCCCCCc
Q 004195 551 DDPSISIIYLIFEYAPNETLRSFISGPG----------------------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608 (769)
Q Consensus 551 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~----------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i 608 (769)
.++||||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|
T Consensus 124 -------~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 193 (344)
T 1rjb_A 124 -------IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SC 193 (344)
T ss_dssp -------CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred -------cEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 799999999999999997543 2379999999999999999999999 99
Q ss_pred cccCccccceeeCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCC
Q 004195 609 FSNNLKITDVLLDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRP 683 (769)
Q Consensus 609 vHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~ 683 (769)
+||||||+||+++.++.+||+|||++........ ....++..|++||.+.+..++.++|||||||++|||+| |+.
T Consensus 194 vH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~ 273 (344)
T 1rjb_A 194 VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVN 273 (344)
T ss_dssp EETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCC
T ss_pred ccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999999976543322 12233445888999888899999999999999999998 999
Q ss_pred CCCCchh-HHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 684 ITSENVV-VLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 684 p~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
||..... ......+... ..+.....+++ .+.+++.+||+.||++|||+.|++++++....
T Consensus 274 p~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 334 (344)
T 1rjb_A 274 PYPGIPVDANFYKLIQNG----------FKMDQPFYATE----EIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA 334 (344)
T ss_dssp SSTTCCCSHHHHHHHHTT----------CCCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred CcccCCcHHHHHHHHhcC----------CCCCCCCCCCH----HHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 9875432 1222222111 11111122333 48899999999999999999999999987643
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-39 Score=340.47 Aligned_cols=252 Identities=16% Similarity=0.190 Sum_probs=198.5
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCC
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~ 553 (769)
.+++|+..+.||+|+||.||+|+.. +++.||||+++..... ...++.+|+..+.++ +||||+++++++.+.+
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~---- 84 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDD---- 84 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETT----
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCC----
Confidence 3567889999999999999999976 7999999999865332 245788999999999 8999999999997643
Q ss_pred CcceEEEEEeccCCCchhhhhcCC---CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC-------
Q 004195 554 SISIIYLIFEYAPNETLRSFISGP---GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN------- 623 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~------- 623 (769)
..++||||+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.+
T Consensus 85 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~ 158 (289)
T 1x8b_A 85 ---HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAAS 158 (289)
T ss_dssp ---EEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC---------
T ss_pred ---eEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccc
Confidence 489999999999999999732 13689999999999999999999999 99999999999999844
Q ss_pred ------------ceeeecCCCCchhhhccCCcceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchh
Q 004195 624 ------------FHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVV 690 (769)
Q Consensus 624 ------------~~~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~ 690 (769)
..+||+|||.+....... ...++..|++||.+.+. .++.++|||||||++|||++|++|+.....
T Consensus 159 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~ 236 (289)
T 1x8b_A 159 EEGDEDDWASNKVMFKIGDLGHVTRISSPQ--VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ 236 (289)
T ss_dssp -----------CCCEEECCCTTCEETTCSC--CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH
T ss_pred cccccccccCCceEEEEcccccccccCCcc--ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH
Confidence 479999999987654332 22355677889987655 566899999999999999999987654332
Q ss_pred HHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 691 VLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
...+... ..+.+...++++ +.+++.+||+.||++|||+.|+++|+|+....
T Consensus 237 --~~~~~~~-----------~~~~~~~~~~~~----~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 287 (289)
T 1x8b_A 237 --WHEIRQG-----------RLPRIPQVLSQE----FTELLKVMIHPDPERRPSAMALVKHSVLLSAS 287 (289)
T ss_dssp --HHHHHTT-----------CCCCCSSCCCHH----HHHHHHHHTCSSGGGSCCHHHHHTCTTC----
T ss_pred --HHHHHcC-----------CCCCCCcccCHH----HHHHHHHHhCCCcccCCCHHHHhhChHhhhhc
Confidence 1111111 012222334444 88999999999999999999999999988643
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-39 Score=365.92 Aligned_cols=260 Identities=18% Similarity=0.197 Sum_probs=204.5
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-------------CChhHHHHHHHHHhhccCCceeeEee
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-------------SSPHMYTYHIELISKLRHSNLVSALG 543 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-------------~~~~~~~~Ei~~l~~l~H~nIv~l~~ 543 (769)
..++|...+.||+|+||+||+|+.. +++.||||++..... ...+.+.+|+.++++++|||||++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 4567999999999999999999976 688999999975431 23467899999999999999999999
Q ss_pred eeeccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC
Q 004195 544 HCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN 623 (769)
Q Consensus 544 ~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~ 623 (769)
+|.+.. ..++|||||++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.+
T Consensus 114 ~~~~~~-------~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~ 182 (504)
T 3q5i_A 114 VFEDKK-------YFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENK 182 (504)
T ss_dssp EEECSS-------EEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESST
T ss_pred EEEcCC-------EEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecC
Confidence 998643 4899999999999999987543 689999999999999999999999 99999999999999877
Q ss_pred c---eeeecCCCCchhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhh
Q 004195 624 F---HVKINSYNLPLLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQV 699 (769)
Q Consensus 624 ~---~~kl~DFGla~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~ 699 (769)
+ .+||+|||+++....... ....++..|++||.+. ..++.++||||+||++|||++|++||...........+..
T Consensus 183 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~ 261 (504)
T 3q5i_A 183 NSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEK 261 (504)
T ss_dssp TCCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred CCCccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHc
Confidence 5 699999999976543322 2334556778888875 5799999999999999999999999987554333222211
Q ss_pred ccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcc
Q 004195 700 NIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQG 760 (769)
Q Consensus 700 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~ 760 (769)
.... .+.......++ ++.+++.+||+.||++|||++|+++|+|+......
T Consensus 262 ~~~~-------~~~~~~~~~s~----~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~~ 311 (504)
T 3q5i_A 262 GKYY-------FDFNDWKNISD----EAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANN 311 (504)
T ss_dssp CCCC-------CCHHHHTTSCH----HHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCCC
T ss_pred CCCC-------CCccccCCCCH----HHHHHHHHHcCCChhHCCCHHHHhcCHhhhhchhc
Confidence 1000 01111122333 48899999999999999999999999999865443
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-39 Score=341.06 Aligned_cols=253 Identities=22% Similarity=0.347 Sum_probs=194.7
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
++|+..+.||+|+||.||+|+.. ++.||||++... ...+.+.+|++++++++||||+++++++.+. .+
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~---------~~ 75 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLNP---------VC 75 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTTT---------TE
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC---------cE
Confidence 45778899999999999999985 788999999642 3456799999999999999999999988631 58
Q ss_pred EEEeccCCCchhhhhcCCC--CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCce-eeecCCCCchh
Q 004195 560 LIFEYAPNETLRSFISGPG--YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH-VKINSYNLPLL 636 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~-~kl~DFGla~~ 636 (769)
+||||+++|+|.+++.... ..+++..+..++.|+++||+|||+....+|+||||||+||+++.++. +||+|||++..
T Consensus 76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~ 155 (307)
T 2eva_A 76 LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD 155 (307)
T ss_dssp EEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---
T ss_pred EEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccc
Confidence 9999999999999998543 24789999999999999999999933238999999999999988876 89999999865
Q ss_pred hhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCcccc
Q 004195 637 AEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM 716 (769)
Q Consensus 637 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 716 (769)
..... ....++..|++||...+..++.++|||||||++|||+||+.||................. ..+...
T Consensus 156 ~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~--------~~~~~~ 226 (307)
T 2eva_A 156 IQTHM-TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNG--------TRPPLI 226 (307)
T ss_dssp ----------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTT--------CCCCCB
T ss_pred ccccc-ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcC--------CCCCcc
Confidence 53322 223356678899999888999999999999999999999999975322111111010000 112222
Q ss_pred CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 717 NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 717 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
..++++ +.+++.+||+.||++|||++|+++++....+
T Consensus 227 ~~~~~~----l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 263 (307)
T 2eva_A 227 KNLPKP----IESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263 (307)
T ss_dssp TTCCHH----HHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred cccCHH----HHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 334443 8899999999999999999999999987643
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-40 Score=361.32 Aligned_cols=270 Identities=9% Similarity=0.037 Sum_probs=187.5
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC---hhHHHHHHHHHhhc--cCCceeeEe-------eeee
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS---PHMYTYHIELISKL--RHSNLVSAL-------GHCL 546 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~---~~~~~~Ei~~l~~l--~H~nIv~l~-------~~~~ 546 (769)
..|...+.||+|+||.||+|+.. +|+.||||++....... .+.+.+|+.+++.+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 35778899999999999999975 79999999998754322 34567785555555 699988865 3333
Q ss_pred ccCCC----------CCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHH------HHHHHHHHHHhcccccCCCCCccc
Q 004195 547 DFSLD----------DPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQR------IAAAIAIVKGVQFLHTGIVPGVFS 610 (769)
Q Consensus 547 ~~~~~----------~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~------~~i~~~ia~gL~yLH~~~~~~ivH 610 (769)
..... .......++|||||+ |+|.+++...+..+++..+ ..++.||++||+|||+. +|+|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ivH 217 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSK---GLVH 217 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEEE
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCcc
Confidence 22110 001145899999998 8999999854334566666 78889999999999999 9999
Q ss_pred cCccccceeeCCCceeeecCCCCchhhhccCCcceeecCCCcchhhhcc--CCCCCCCCeeehhHHHHHHHhCCCCCCCc
Q 004195 611 NNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLAR--TEQDDKSDVYDIGIILIEIIVGRPITSEN 688 (769)
Q Consensus 611 rDlKp~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~--~~~~~ksDVwS~Gvil~elltG~~p~~~~ 688 (769)
|||||+|||++.++.+||+|||+++....... ....+..|++||.+.+ ..++.++|||||||++|||+||+.||...
T Consensus 218 rDikp~NIll~~~~~~kL~DFG~a~~~~~~~~-~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~ 296 (371)
T 3q60_A 218 GHFTPDNLFIMPDGRLMLGDVSALWKVGTRGP-ASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLV 296 (371)
T ss_dssp TTCSGGGEEECTTSCEEECCGGGEEETTCEEE-GGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBC
T ss_pred CcCCHHHEEECCCCCEEEEecceeeecCCCcc-CccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCc
Confidence 99999999999999999999999976543321 2223367788999876 67999999999999999999999999765
Q ss_pred hhHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcc
Q 004195 689 VVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQG 760 (769)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~ 760 (769)
.......+....... ........+ ....+++ .+.+++.+||+.||++|||+.|+++|+||......
T Consensus 297 ~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~----~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~ 362 (371)
T 3q60_A 297 TPGIKGSWKRPSLRV-PGTDSLAFG-SCTPLPD----FVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQNE 362 (371)
T ss_dssp CTTCTTCCCBCCTTS-CCCCSCCCT-TSSCCCH----HHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHHHHH
T ss_pred Ccccccchhhhhhhh-ccccccchh-hccCCCH----HHHHHHHHHcCCChhhCCCHHHHhcCHHHHHHHHH
Confidence 322111100000000 000000001 1123333 48899999999999999999999999999865443
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-39 Score=348.79 Aligned_cols=281 Identities=16% Similarity=0.217 Sum_probs=198.2
Q ss_pred HHHHHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCC
Q 004195 473 DELKEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLD 551 (769)
Q Consensus 473 ~el~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~ 551 (769)
.+.....++|...+.||+|+||.||+|+.. +|+.||||++.... .....+.+|++.++.++||||++++++|.+....
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 445667789999999999999999999975 69999999986543 3345677888889999999999999999765443
Q ss_pred CCCcceEEEEEeccCCCchhhhhc---CCCCCCCHHHHHHHHHHHHHHhcccc--cCCCCCccccCccccceeeCC-Cce
Q 004195 552 DPSISIIYLIFEYAPNETLRSFIS---GPGYKLTWVQRIAAAIAIVKGVQFLH--TGIVPGVFSNNLKITDVLLDE-NFH 625 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~---~~~~~l~~~~~~~i~~~ia~gL~yLH--~~~~~~ivHrDlKp~NILld~-~~~ 625 (769)
.......++||||+++ +|.+.+. .....+++..+..++.|++.||+||| +. +|+||||||+|||++. ++.
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~ 170 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGT 170 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCc
Confidence 3334457899999986 5544433 33447899999999999999999999 77 9999999999999997 899
Q ss_pred eeecCCCCchhhhccCC-cceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccc
Q 004195 626 VKINSYNLPLLAEARGK-GSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIG 702 (769)
Q Consensus 626 ~kl~DFGla~~~~~~~~-~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~ 702 (769)
+||+|||+++....... ....++..|++||.+.+. .++.++|||||||++|||+||++||....... ...+......
T Consensus 171 ~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~ 250 (360)
T 3e3p_A 171 LKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGC 250 (360)
T ss_dssp EEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCC
T ss_pred EEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCC
Confidence 99999999976543322 222334567889987554 48999999999999999999999997654322 2222211111
Q ss_pred cccccccccCc----------------cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 703 TDEARKSIVDP----------------AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 703 ~~~~~~~~~d~----------------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
.........++ ............++.+++.+||+.||++|||+.|+++|+||....
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 322 (360)
T 3e3p_A 251 PSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH 322 (360)
T ss_dssp CCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred CCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccC
Confidence 10000000000 000111122355699999999999999999999999999998653
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-39 Score=340.25 Aligned_cols=253 Identities=19% Similarity=0.279 Sum_probs=204.7
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC---ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS---SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~---~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|...+.||+|+||.||+|+.. +++.||+|++...... ..+.+.+|+.++++++||||+++++++.+.+
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~------ 88 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND------ 88 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS------
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC------
Confidence 46778899999999999999976 6889999999755322 2356889999999999999999999997643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+++++|.+++.... .+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 89 -~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 163 (294)
T 2rku_A 89 -FVFVVLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLAT 163 (294)
T ss_dssp -EEEEEEECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred -EEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCce
Confidence 4899999999999999987543 689999999999999999999999 99999999999999999999999999986
Q ss_pred hhhccC--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCc
Q 004195 636 LAEARG--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 636 ~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
...... .....++..|.+||...+..++.++||||||+++|||+||+.||...........+... ..
T Consensus 164 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-----------~~ 232 (294)
T 2rku_A 164 KVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN-----------EY 232 (294)
T ss_dssp ECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT-----------CC
T ss_pred ecccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhc-----------cC
Confidence 553222 12223455678899988888999999999999999999999999765433221111100 01
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
.+....++ .+.+++.+||+.||++|||++|+++|+|+....
T Consensus 233 ~~~~~~~~----~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~ 273 (294)
T 2rku_A 233 SIPKHINP----VAASLIQKMLQTDPTARPTINELLNDEFFTSGY 273 (294)
T ss_dssp CCCTTSCH----HHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSC
T ss_pred CCccccCH----HHHHHHHHHcccChhhCcCHHHHhhChheecCC
Confidence 11122333 488999999999999999999999999997543
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-39 Score=350.81 Aligned_cols=269 Identities=16% Similarity=0.287 Sum_probs=204.2
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC-ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS-SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
..++|...+.||+|+||.||+|+.. +++.||||++...... ..+.+.+|++++++++||||+++++++...... ..
T Consensus 25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--~~ 102 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIE--QM 102 (364)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTT--TC
T ss_pred ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCcc--cc
Confidence 3457889999999999999999975 7889999999753322 235688999999999999999999999764321 23
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
...++||||++ |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 103 ~~~~iv~e~~~-~~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~ 176 (364)
T 3qyz_A 103 KDVYIVQDLME-TDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR 176 (364)
T ss_dssp CCEEEEEECCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred ceEEEEEcccC-cCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceE
Confidence 45899999997 6999998754 589999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccCC-----cceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccccc--cc
Q 004195 636 LAEARGK-----GSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTD--EA 706 (769)
Q Consensus 636 ~~~~~~~-----~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~--~~ 706 (769)
....... ....++..|++||.+.+ ..++.++|||||||++|||+||++||....... ...+... .... +.
T Consensus 177 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~-~~~~~~~~ 255 (364)
T 3qyz_A 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI-LGSPSQED 255 (364)
T ss_dssp ECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHH-HCSCCHHH
T ss_pred ecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHH-hCCCCHHH
Confidence 6543221 12234556778997654 458999999999999999999999997644322 2221111 1100 00
Q ss_pred cccc------------cC------ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 707 RKSI------------VD------PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 707 ~~~~------------~d------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
+... .. ....... ..++.+++.+||+.||++|||++|+++|+|+.....
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~ 322 (364)
T 3qyz_A 256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNA----DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 322 (364)
T ss_dssp HHTCCCHHHHHHHHTSCCCCCCCHHHHCTTS----CHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTTCC
T ss_pred HHHhhhhhHHHHHHhcCCccCCCHHHhCCCC----CHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhccC
Confidence 0000 00 0011122 234889999999999999999999999999986533
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-39 Score=338.46 Aligned_cols=255 Identities=16% Similarity=0.257 Sum_probs=200.3
Q ss_pred hcCCCCcCccccCCceeEEEEEeCC----CcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLTD----GTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~~----g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
.++|...+.||+|+||.||+|+..+ +..||||.++.... ...+.+.+|+.++++++||||+++++++.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---- 86 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP---- 86 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSSS----
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCCC----
Confidence 4568888999999999999998542 34699999975422 23467899999999999999999999986422
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
.++||||+++++|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 87 ----~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 159 (281)
T 3cc6_A 87 ----TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGL 159 (281)
T ss_dssp ----CEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCG
T ss_pred ----CEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCC
Confidence 5899999999999999986555799999999999999999999999 999999999999999999999999999
Q ss_pred chhhhccCC---cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhcccccccccc
Q 004195 634 PLLAEARGK---GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKS 709 (769)
Q Consensus 634 a~~~~~~~~---~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (769)
+........ .....+..|++||......++.++|||||||++|||+| |+.||...........+....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~-------- 231 (281)
T 3cc6_A 160 SRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD-------- 231 (281)
T ss_dssp GGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTC--------
T ss_pred CcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCC--------
Confidence 876543221 11122335788999888889999999999999999998 999986543322222221110
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 710 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
.+.....+++ .+.+++.+||+.||++|||+.|+++++....+.
T Consensus 232 --~~~~~~~~~~----~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 232 --RLPKPDLCPP----VLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp --CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --CCCCCCCCCH----HHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 0111122333 488999999999999999999999999876543
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-39 Score=334.22 Aligned_cols=252 Identities=16% Similarity=0.285 Sum_probs=199.0
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|...+.||+|+||.||+|+.+ |+.||||+++...... .+.+.+|+.++++++||||+++++++.+.. ...
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~ 83 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPP-----APH 83 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTT-----SSS
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCC-----CCC
Confidence 46778899999999999999985 8899999998653222 356899999999999999999999997642 134
Q ss_pred EEEEEeccCCCchhhhhcCCCC-CCCHHHHHHHHHHHHHHhcccccCCCCC--ccccCccccceeeCCCceeeecCCCCc
Q 004195 558 IYLIFEYAPNETLRSFISGPGY-KLTWVQRIAAAIAIVKGVQFLHTGIVPG--VFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~-~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
.++||||+++|+|.+++..... .+++..+..++.|+++||+|||+. + |+||||||+||+++.++.+||+|||++
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~ 160 (271)
T 3kmu_A 84 PTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVK 160 (271)
T ss_dssp CEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSC
T ss_pred eEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccce
Confidence 7999999999999999985442 589999999999999999999997 7 999999999999999999999988876
Q ss_pred hhhhccCCcceeecCCCcchhhhccCCCCC---CCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccccccc
Q 004195 635 LLAEARGKGSAEVSSPAKKTSVLARTEQDD---KSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIV 711 (769)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~---ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (769)
..... ....++..|++||.+.+..++. ++|||||||++|||+||+.||.............. ...
T Consensus 161 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~---------~~~ 228 (271)
T 3kmu_A 161 FSFQS---PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVAL---------EGL 228 (271)
T ss_dssp CTTSC---TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHH---------SCC
T ss_pred eeecc---cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHh---------cCC
Confidence 44322 1223456678899887655544 79999999999999999999976543322111110 011
Q ss_pred CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 712 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.+.....+++ .+.+++.+||+.||++|||++|+++.+....
T Consensus 229 ~~~~~~~~~~----~~~~li~~~l~~~p~~Rps~~~il~~L~~l~ 269 (271)
T 3kmu_A 229 RPTIPPGISP----HVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269 (271)
T ss_dssp CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred CCCCCCCCCH----HHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 1222233444 4889999999999999999999999987653
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-39 Score=363.64 Aligned_cols=256 Identities=18% Similarity=0.228 Sum_probs=203.8
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc--CCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS--KKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.++|...+.||+|+||+||+|+.. +|+.||||++... .......+.+|++++++++|||||++++++.+..
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~------ 94 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSS------ 94 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS------
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCC------
Confidence 456888999999999999999976 7999999999643 2345678999999999999999999999998643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeC---CCceeeecCCC
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD---ENFHVKINSYN 632 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld---~~~~~kl~DFG 632 (769)
..++|||||++|+|.+.+.... .+++..+..++.|++.||+|||+. +|+||||||+|||++ .++.+||+|||
T Consensus 95 -~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg 169 (486)
T 3mwu_A 95 -SFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFG 169 (486)
T ss_dssp -EEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCS
T ss_pred -EEEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECC
Confidence 4899999999999999887543 689999999999999999999999 999999999999995 45679999999
Q ss_pred CchhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhh-hhccccccccccc
Q 004195 633 LPLLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLL-QVNIGTDEARKSI 710 (769)
Q Consensus 633 la~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~ 710 (769)
+++....... ....++..|++||.+. +.++.++||||+||++|||++|++||...........+ ......
T Consensus 170 ~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~------- 241 (486)
T 3mwu_A 170 LSTCFQQNTKMKDRIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAF------- 241 (486)
T ss_dssp CTTTBCCC----CCTTGGGGCCGGGGG-SCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCS-------
T ss_pred cCeECCCCCccCCCcCCCCCCCHHHhC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC-------
Confidence 9976543322 2233455678888875 46999999999999999999999999765443322222 111110
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 711 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
+.......++ .+.+++.+||+.||++|||+.|+++|+|+....
T Consensus 242 -~~~~~~~~s~----~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~ 284 (486)
T 3mwu_A 242 -DLPQWRTISD----DAKDLIRKMLTFHPSLRITATQCLEHPWIQKYS 284 (486)
T ss_dssp -CSGGGGGSCH----HHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTC
T ss_pred -CCcccCCCCH----HHHHHHHHHcCCChhhCcCHHHHhcCHhhccCc
Confidence 1111122333 488999999999999999999999999997643
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-39 Score=345.26 Aligned_cols=264 Identities=17% Similarity=0.277 Sum_probs=186.1
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC-CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK-KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
.++|...+.||+|+||.||+|+.. +++.||||++.... ....+++.+|++++++++||||+++++++.+.+.
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~------ 87 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDE------ 87 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSC------
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCC------
Confidence 467888999999999999999965 78999999997543 2334678899999999999999999999986443
Q ss_pred eEEEEEeccCCCchhhhhcC-------CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeec
Q 004195 557 IIYLIFEYAPNETLRSFISG-------PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKIN 629 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~-------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~ 629 (769)
.++||||+++++|.+++.. ....+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+
T Consensus 88 -~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~ 163 (303)
T 2vwi_A 88 -LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIA 163 (303)
T ss_dssp -EEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEEC
T ss_pred -cEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEE
Confidence 8999999999999999862 234689999999999999999999999 99999999999999999999999
Q ss_pred CCCCchhhhccC-------CcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcc
Q 004195 630 SYNLPLLAEARG-------KGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNI 701 (769)
Q Consensus 630 DFGla~~~~~~~-------~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~ 701 (769)
|||++....... .....++..|++||.... ..++.++|||||||++|||+||+.||...............
T Consensus 164 dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~- 242 (303)
T 2vwi_A 164 DFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQN- 242 (303)
T ss_dssp CCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTS-
T ss_pred eccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhcc-
Confidence 999986543221 112234556788988765 56899999999999999999999999764332211111000
Q ss_pred ccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 702 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
..........++.....++++ +.+++.+||+.||++|||+.|+++|+||...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~----~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 294 (303)
T 2vwi_A 243 DPPSLETGVQDKEMLKKYGKS----FRKMISLCLQKDPEKRPTAAELLRHKFFQKA 294 (303)
T ss_dssp SCCCTTC-----CCCCCCCHH----HHHHHHHHCCSSGGGSCCHHHHHTSTTC---
T ss_pred CCCccccccccchhhhhhhHH----HHHHHHHHccCChhhCcCHHHHhhChhhhcC
Confidence 000011111222233344444 8899999999999999999999999998754
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-39 Score=363.79 Aligned_cols=256 Identities=18% Similarity=0.218 Sum_probs=205.2
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
.++|...+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++.+..
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~----- 258 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKT----- 258 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCC-----
Confidence 367888899999999999999976 69999999997542 334567889999999999999999999987643
Q ss_pred cceEEEEEeccCCCchhhhhcCC---CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCC
Q 004195 555 ISIIYLIFEYAPNETLRSFISGP---GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSY 631 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DF 631 (769)
..|+||||+++|+|.+++... ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 259 --~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DF 333 (543)
T 3c4z_A 259 --DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDL 333 (543)
T ss_dssp --EEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCC
T ss_pred --EEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeec
Confidence 489999999999999998743 34699999999999999999999999 9999999999999999999999999
Q ss_pred CCchhhhccCC--cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhccccccccc
Q 004195 632 NLPLLAEARGK--GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIGTDEARK 708 (769)
Q Consensus 632 Gla~~~~~~~~--~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~ 708 (769)
|+++....... ....++..|++||.+.+..++.++|||||||++|||+||++||...... ....+.+.....
T Consensus 334 Gla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~----- 408 (543)
T 3c4z_A 334 GLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ----- 408 (543)
T ss_dssp TTCEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHC-----
T ss_pred ceeeeccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhc-----
Confidence 99976543322 2234566788999998889999999999999999999999999754210 001111100000
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCC-----HHHHHHHhHhhh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPS-----VEDTLWNLQFAT 756 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~l~~~~ 756 (769)
.......+++ .+.+++.+||+.||++||+ ++|+++|+||..
T Consensus 409 ---~~~~p~~~s~----~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~ 454 (543)
T 3c4z_A 409 ---AVTYPDKFSP----ASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRD 454 (543)
T ss_dssp ---CCCCCTTSCH----HHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTT
T ss_pred ---ccCCCcccCH----HHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccC
Confidence 0111122333 4889999999999999996 489999999975
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-39 Score=348.67 Aligned_cols=254 Identities=19% Similarity=0.278 Sum_probs=205.7
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC---ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS---SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~---~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
.++|...+.||+|+||.||+|+.. +++.||+|++...... ..+.+.+|+.++++++||||+++++++.+.+
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----- 114 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND----- 114 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC-----
Confidence 356888999999999999999976 5889999999755322 2356889999999999999999999998643
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
..++||||+++++|.+++.... .+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 115 --~~~lv~e~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~ 188 (335)
T 2owb_A 115 --FVFVVLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA 188 (335)
T ss_dssp --EEEEEECCCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred --eEEEEEecCCCCCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCc
Confidence 4899999999999999987543 689999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhccC--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccC
Q 004195 635 LLAEARG--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVD 712 (769)
Q Consensus 635 ~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 712 (769)
+...... .....++..|++||.+.+..++.++|||||||++|||+||+.||...........+... .
T Consensus 189 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~-----------~ 257 (335)
T 2owb_A 189 TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN-----------E 257 (335)
T ss_dssp EECCSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHT-----------C
T ss_pred eecccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcC-----------C
Confidence 6553222 12233455688899998888999999999999999999999999765432221111110 0
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 713 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
..+...+++ .+.+++.+||+.||++|||++|+++|+||....
T Consensus 258 ~~~~~~~~~----~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~~ 299 (335)
T 2owb_A 258 YSIPKHINP----VAASLIQKMLQTDPTARPTINELLNDEFFTSGY 299 (335)
T ss_dssp CCCCTTSCH----HHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSC
T ss_pred CCCCccCCH----HHHHHHHHHccCChhHCcCHHHHhcCccccCCC
Confidence 111122333 388999999999999999999999999997543
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-39 Score=339.54 Aligned_cols=255 Identities=22% Similarity=0.319 Sum_probs=206.2
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
..++|...+.||+|+||.||+|+.. ++..||||.+... ....+.+.+|++++++++||||+++++++.+...
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~------ 83 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP------ 83 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS------
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC------
Confidence 3456888899999999999999976 5889999999753 2345679999999999999999999999976443
Q ss_pred eEEEEEeccCCCchhhhhcC-CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 557 IIYLIFEYAPNETLRSFISG-PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
.++||||+++++|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 84 -~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~ 159 (288)
T 3kfa_A 84 -FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR 159 (288)
T ss_dssp -EEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGG
T ss_pred -EEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccce
Confidence 8999999999999999973 334699999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccCC---cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhcccccccccccc
Q 004195 636 LAEARGK---GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIV 711 (769)
Q Consensus 636 ~~~~~~~---~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (769)
....... ....++..|.+||......++.++||||||+++|||++ |++||...........+... .
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~----------~ 229 (288)
T 3kfa_A 160 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD----------Y 229 (288)
T ss_dssp TSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT----------C
T ss_pred eccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcc----------C
Confidence 6543322 12223345788999888899999999999999999999 99998765433332222211 1
Q ss_pred CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 712 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.+.....+++ .+.+++.+|++.||++|||++|+++.+....+
T Consensus 230 ~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~ 271 (288)
T 3kfa_A 230 RMERPEGCPE----KVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271 (288)
T ss_dssp CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCH----HHHHHHHHHhCCChhhCcCHHHHHHHHHHHHH
Confidence 1111123333 48899999999999999999999998886543
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=344.91 Aligned_cols=266 Identities=20% Similarity=0.298 Sum_probs=198.4
Q ss_pred CCCCcCccccCCceeEEEEEe-----CCCcEEEEEEccccC-CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 481 CFDSSSFMCDASHGQIYKGKL-----TDGTLVAIRSLKMSK-KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~-----~~g~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
.|+..+.||+|+||.||+|++ .+++.||||+++... ....+.+.+|++++++++||||+++++++.+...
T Consensus 22 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~---- 97 (302)
T 4e5w_A 22 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGG---- 97 (302)
T ss_dssp GEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-------
T ss_pred hhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCC----
Confidence 477789999999999999983 368999999998543 3345779999999999999999999999986422
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
...++||||+++|+|.+++......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 98 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 173 (302)
T 4e5w_A 98 -NGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLT 173 (302)
T ss_dssp -CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred -ceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECccccc
Confidence 337999999999999999965545799999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhccCC-----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccc--cccc
Q 004195 635 LLAEARGK-----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGT--DEAR 707 (769)
Q Consensus 635 ~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~--~~~~ 707 (769)
+....... ....++..|++||.+.+..++.++|||||||++|||+||+.|+.......... ....... ....
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~ 252 (302)
T 4e5w_A 174 KAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKM-IGPTHGQMTVTRL 252 (302)
T ss_dssp EECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHH-HCSCCGGGHHHHH
T ss_pred ccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhc-cCCcccccCHHHH
Confidence 76543321 11222334788999888889999999999999999999998865432111100 0000000 0000
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 708 KSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 708 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
............+...+..+.+++.+||+.||++|||+.|+++.+...
T Consensus 253 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 300 (302)
T 4e5w_A 253 VNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300 (302)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence 000000111111222334489999999999999999999999988753
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-39 Score=345.58 Aligned_cols=253 Identities=19% Similarity=0.333 Sum_probs=195.6
Q ss_pred CCCCcCccccCCceeEEEEEeCC-----CcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 481 CFDSSSFMCDASHGQIYKGKLTD-----GTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~~-----g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
+|...+.||+|+||.||+|+... +..||||.++.... .....+.+|++++++++||||+++++++.+...
T Consensus 45 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---- 120 (333)
T 1mqb_A 45 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKP---- 120 (333)
T ss_dssp TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS----
T ss_pred HhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCC----
Confidence 45567899999999999998642 24699999975432 123468899999999999999999999976433
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
.++||||+++|+|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 121 ---~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 194 (333)
T 1mqb_A 121 ---MMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLS 194 (333)
T ss_dssp ---EEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-
T ss_pred ---cEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcc
Confidence 8999999999999999986555799999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhccCCcc-----eeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccc
Q 004195 635 LLAEARGKGS-----AEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARK 708 (769)
Q Consensus 635 ~~~~~~~~~~-----~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (769)
+......... ...+..|++||.+....++.++|||||||++|||+| |+.||...........+....
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~------- 267 (333)
T 1mqb_A 195 RVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGF------- 267 (333)
T ss_dssp ----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTC-------
T ss_pred hhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCC-------
Confidence 7654322111 111235788999888899999999999999999999 999997654333222221110
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.+.....+++ .+.+++.+||+.||++||++.|++++++....
T Consensus 268 ---~~~~~~~~~~----~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 309 (333)
T 1mqb_A 268 ---RLPTPMDCPS----AIYQLMMQCWQQERARRPKFADIVSILDKLIR 309 (333)
T ss_dssp ---CCCCCTTCBH----HHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred ---cCCCcccCCH----HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 0111122333 48899999999999999999999999986644
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-39 Score=351.59 Aligned_cols=268 Identities=14% Similarity=0.231 Sum_probs=204.3
Q ss_pred hcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCCh-----------------hHHHHHHHHHhhccCCceeeE
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSP-----------------HMYTYHIELISKLRHSNLVSA 541 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~-----------------~~~~~Ei~~l~~l~H~nIv~l 541 (769)
.++|...+.||+|+||.||+|+. +|+.||||++........ +.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 35788899999999999999999 899999999975422111 789999999999999999999
Q ss_pred eeeeeccCCCCCCcceEEEEEeccCCCchhhh------hcCC-CCCCCHHHHHHHHHHHHHHhccccc-CCCCCccccCc
Q 004195 542 LGHCLDFSLDDPSISIIYLIFEYAPNETLRSF------ISGP-GYKLTWVQRIAAAIAIVKGVQFLHT-GIVPGVFSNNL 613 (769)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~------l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDl 613 (769)
++++.+.+ ..++||||+++|+|.++ +... ...+++..+..++.|+++||+|||+ . +|+||||
T Consensus 109 ~~~~~~~~-------~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl 178 (348)
T 2pml_X 109 EGIITNYD-------EVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDV 178 (348)
T ss_dssp SEEEESSS-------EEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCC
T ss_pred EEEEeeCC-------eEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCC
Confidence 99998643 48999999999999998 6542 4579999999999999999999998 7 9999999
Q ss_pred cccceeeCCCceeeecCCCCchhhhccCCcceeecCCCcchhhhccC-CCCC-CCCeeehhHHHHHHHhCCCCCCCchh-
Q 004195 614 KITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLART-EQDD-KSDVYDIGIILIEIIVGRPITSENVV- 690 (769)
Q Consensus 614 Kp~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~-ksDVwS~Gvil~elltG~~p~~~~~~- 690 (769)
||+||+++.++.+||+|||.+............++..|++||...+. .++. ++|||||||++|||+||+.||.....
T Consensus 179 ~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 258 (348)
T 2pml_X 179 KPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL 258 (348)
T ss_dssp CGGGEEECTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS
T ss_pred ChHhEEEcCCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH
Confidence 99999999999999999999976533322333445567889988766 5666 99999999999999999999976432
Q ss_pred HHH-HhhhhhccccccccccccCcccc---CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 691 VLV-KDLLQVNIGTDEARKSIVDPAVM---NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 691 ~~~-~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
... ..+................+... ..........+.+++.+||+.||++|||++|+++|+||...
T Consensus 259 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~ 329 (348)
T 2pml_X 259 VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADT 329 (348)
T ss_dssp HHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTC
T ss_pred HHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCC
Confidence 222 22111111111000000000000 00011223458999999999999999999999999998753
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-39 Score=348.11 Aligned_cols=269 Identities=15% Similarity=0.200 Sum_probs=198.4
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.++|...+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|+.+++.++||||+++++++...... ...
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~-~~~ 102 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL-EEF 102 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCST-TTC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccc-ccc
Confidence 357888999999999999999965 6899999999754322 235688999999999999999999999754321 123
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
...++||||++ |+|.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 103 ~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 175 (371)
T 2xrw_A 103 QDVYIVMELMD-ANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR 175 (371)
T ss_dssp CEEEEEEECCS-EEHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC--
T ss_pred cceEEEEEcCC-CCHHHHHhh---ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeeccc
Confidence 46899999997 588888863 489999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccC-CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccccc-cc------
Q 004195 636 LAEARG-KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTD-EA------ 706 (769)
Q Consensus 636 ~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~-~~------ 706 (769)
...... .....++..|++||.+.+..++.++|||||||++|||+||+.||....... ...++.. .... ..
T Consensus 176 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~ 254 (371)
T 2xrw_A 176 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ-LGTPCPEFMKKLQ 254 (371)
T ss_dssp --------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC--CCCCCHHHHTTSC
T ss_pred ccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH-hCCCCHHHHHHhh
Confidence 654332 222345567889999988889999999999999999999999997654322 2221111 0000 00
Q ss_pred -----------------cccccCccccCC---CCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 707 -----------------RKSIVDPAVMNE---CSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 707 -----------------~~~~~d~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
+.........+. ........+.+++.+||+.||++|||++|+++|+|+..
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 324 (371)
T 2xrw_A 255 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 324 (371)
T ss_dssp HHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred hHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhh
Confidence 000000000000 11223567899999999999999999999999999874
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-39 Score=345.34 Aligned_cols=256 Identities=19% Similarity=0.330 Sum_probs=202.3
Q ss_pred hcCCCCcCccccCCceeEEEEEeC--------CCcEEEEEEccccCC-CChhHHHHHHHHHhhc-cCCceeeEeeeeecc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT--------DGTLVAIRSLKMSKK-SSPHMYTYHIELISKL-RHSNLVSALGHCLDF 548 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~--------~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~ 548 (769)
.++|...+.||+|+||.||+|+.. ++..||||+++.... ...+.+.+|+++++++ +||||++++++|.+.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 357888999999999999999863 467899999975422 1235688999999999 899999999999764
Q ss_pred CCCCCCcceEEEEEeccCCCchhhhhcCCC---------------CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCc
Q 004195 549 SLDDPSISIIYLIFEYAPNETLRSFISGPG---------------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNL 613 (769)
Q Consensus 549 ~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDl 613 (769)
+. .++||||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||
T Consensus 114 ~~-------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dl 183 (334)
T 2pvf_A 114 GP-------LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDL 183 (334)
T ss_dssp SC-------CEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred Cc-------eEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCC
Confidence 43 799999999999999997442 2489999999999999999999999 9999999
Q ss_pred cccceeeCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCc
Q 004195 614 KITDVLLDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSEN 688 (769)
Q Consensus 614 Kp~NILld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~ 688 (769)
||+||+++.++.+||+|||+++....... .....+..|++||.+.+..++.++|||||||++|||+| |+.||...
T Consensus 184 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 263 (334)
T 2pvf_A 184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263 (334)
T ss_dssp SGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcC
Confidence 99999999999999999999965543221 11122345788998888889999999999999999999 99999765
Q ss_pred hhHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 689 VVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
........+.... .+.....+++ .+.+++.+||+.||++|||+.|+++++..+...
T Consensus 264 ~~~~~~~~~~~~~----------~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~ 319 (334)
T 2pvf_A 264 PVEELFKLLKEGH----------RMDKPANCTN----ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319 (334)
T ss_dssp CHHHHHHHHHHTC----------CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhcCC----------CCCCCccCCH----HHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 4433322221110 1111223343 488999999999999999999999999876543
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-39 Score=336.60 Aligned_cols=252 Identities=16% Similarity=0.228 Sum_probs=200.9
Q ss_pred CCCCcC-ccccCCceeEEEEEeC---CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 481 CFDSSS-FMCDASHGQIYKGKLT---DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 481 ~f~~~~-~iG~G~~g~Vy~~~~~---~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
+|...+ .||+|+||.||+|++. ++..||||+++.... ...+.+.+|++++++++||||+++++++.. +
T Consensus 10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~------ 82 (287)
T 1u59_A 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-E------ 82 (287)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-S------
T ss_pred HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecC-C------
Confidence 444455 8999999999999854 578899999986422 234678899999999999999999999843 2
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+++++|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 83 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~ 158 (287)
T 1u59_A 83 -ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSK 158 (287)
T ss_dssp -SEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCE
T ss_pred -CcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECccccee
Confidence 27999999999999999986666799999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccCC-----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhcccccccccc
Q 004195 636 LAEARGK-----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKS 709 (769)
Q Consensus 636 ~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (769)
....... ....++..|++||......++.++|||||||++|||+| |+.||...........+...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~--------- 229 (287)
T 1u59_A 159 ALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQG--------- 229 (287)
T ss_dssp ECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTT---------
T ss_pred eeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcC---------
Confidence 6533221 11122345788998888889999999999999999999 99999765433322222111
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 710 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
..+.....+++ .+.+++.+||+.||++||++.|++++++....
T Consensus 230 -~~~~~~~~~~~----~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 272 (287)
T 1u59_A 230 -KRMECPPECPP----ELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 272 (287)
T ss_dssp -CCCCCCTTCCH----HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CcCCCCCCcCH----HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 01112223344 48899999999999999999999999997643
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-39 Score=335.94 Aligned_cols=255 Identities=21% Similarity=0.311 Sum_probs=191.1
Q ss_pred hcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
.++|...+.||+|+||.||+|+.. ..||||+++...... .+.+.+|++++++++||||+++++++...
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-------- 92 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP-------- 92 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS--------
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCC--------
Confidence 346888899999999999999864 359999997653322 35689999999999999999999976532
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++||||+++++|.+++......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 93 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~ 169 (289)
T 3og7_A 93 QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATE 169 (289)
T ss_dssp SCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC----
T ss_pred ccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccc
Confidence 26999999999999999986666799999999999999999999999 999999999999999999999999999865
Q ss_pred hhccC----CcceeecCCCcchhhhc---cCCCCCCCCeeehhHHHHHHHhCCCCCCCchh-HHHHhhhhhccccccccc
Q 004195 637 AEARG----KGSAEVSSPAKKTSVLA---RTEQDDKSDVYDIGIILIEIIVGRPITSENVV-VLVKDLLQVNIGTDEARK 708 (769)
Q Consensus 637 ~~~~~----~~~~~~~~~~~~pe~~~---~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~ 708 (769)
..... .....++..|++||.+. ...++.++|||||||++|||+||+.||..... ......+...... ..
T Consensus 170 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~-~~-- 246 (289)
T 3og7_A 170 KSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLS-PD-- 246 (289)
T ss_dssp --------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCC-CC--
T ss_pred cccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccC-cc--
Confidence 43211 12223456678899875 56688899999999999999999999976332 2222222111000 00
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
-+.....++ ..+.+++.+||+.||++|||+.|+++.+....
T Consensus 247 ---~~~~~~~~~----~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 247 ---LSKVRSNCP----KRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp ---TTSSCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred ---hhhccccCC----HHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 011122333 34899999999999999999999999987653
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-39 Score=351.15 Aligned_cols=266 Identities=18% Similarity=0.268 Sum_probs=187.3
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.++|...+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++||||+++++++...... ...
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~-~~~ 106 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSL-EEF 106 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSG-GGC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCcc-ccC
Confidence 357888999999999999999965 7999999999754222 235688999999999999999999998753210 012
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
...++|+||+ +++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~ 180 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 180 (367)
T ss_dssp CCCEEEEECC-CEECC-----C--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC-----
T ss_pred CeEEEEeccc-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccccc
Confidence 3479999999 68999998753 699999999999999999999998 99999999999999999999999999997
Q ss_pred hhhccCCcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccccc--ccccccc
Q 004195 636 LAEARGKGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTD--EARKSIV 711 (769)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~--~~~~~~~ 711 (769)
..... .....++..|++||.+.+ ..++.++||||+||++|||+||++||.+..... ...+... .+.. +.+..+.
T Consensus 181 ~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~-~g~p~~~~~~~~~ 258 (367)
T 2fst_X 181 HTADE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKIS 258 (367)
T ss_dssp -----------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH-HCSCCHHHHTTCC
T ss_pred ccccc-CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH-hCCCCHHHHHHhh
Confidence 65432 222344566788998766 678999999999999999999999997654322 2222211 1110 0000000
Q ss_pred C------------------ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 712 D------------------PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 712 d------------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
. +...... ...+.+|+.+||+.||++|||+.|+++|+||...
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~ 318 (367)
T 2fst_X 259 SESARNYIQSLTQMPKMNFANVFIGA----NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 318 (367)
T ss_dssp CHHHHHHHHTSCCCCCCCHHHHTTTC----CHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred hHHHHHHHhccCCCCCCCHHHHCCCC----CHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhc
Confidence 0 0001112 2348899999999999999999999999999754
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-39 Score=370.20 Aligned_cols=253 Identities=24% Similarity=0.367 Sum_probs=204.1
Q ss_pred hcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
.++|...+.||+|+||.||+|++.++..||||+++... ...++|.+|+++|++++|||||+++++|.+ . ..
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~-------~~ 336 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E-------PI 336 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-S-------SC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-c-------cc
Confidence 45677889999999999999999888889999998653 346789999999999999999999999865 2 26
Q ss_pred EEEEeccCCCchhhhhcC-CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 559 YLIFEYAPNETLRSFISG-PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
++|||||++|+|.+++.. .+..+++.++..|+.||++||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 337 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 413 (535)
T 2h8h_A 337 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLI 413 (535)
T ss_dssp EEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTC
T ss_pred eEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceec
Confidence 999999999999999973 223589999999999999999999999 9999999999999999999999999999765
Q ss_pred hccC---CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCc
Q 004195 638 EARG---KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 638 ~~~~---~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
.... .........|++||.+....++.++|||||||++|||+| |+.||.......+...+.... ..
T Consensus 414 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~----------~~ 483 (535)
T 2h8h_A 414 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY----------RM 483 (535)
T ss_dssp CCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTC----------CC
T ss_pred CCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC----------CC
Confidence 3221 111122345788999888899999999999999999999 899997654333322221111 11
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.....+++ .+.+++.+||+.||++|||+++|++.+...-.
T Consensus 484 ~~~~~~~~----~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 523 (535)
T 2h8h_A 484 PCPPECPE----SLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 523 (535)
T ss_dssp CCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred CCCCCCCH----HHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence 11123343 48899999999999999999999999886543
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-39 Score=343.46 Aligned_cols=260 Identities=16% Similarity=0.164 Sum_probs=203.5
Q ss_pred HHHHhcCCCCc-CccccCCceeEEEEEeC-CCcEEEEEEccccCC--CChhHHHHHHHHHhhcc-CCceeeEeeeeeccC
Q 004195 475 LKEATDCFDSS-SFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK--SSPHMYTYHIELISKLR-HSNLVSALGHCLDFS 549 (769)
Q Consensus 475 l~~~t~~f~~~-~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~ 549 (769)
.....+.|... +.||+|+||.||+|+.. +|+.||||++..... .....+.+|+.++.+++ ||||+++++++.+..
T Consensus 23 ~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~ 102 (327)
T 3lm5_A 23 MENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTS 102 (327)
T ss_dssp HHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred HHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCC
Confidence 34445567666 88999999999999976 699999999976432 23567899999999995 699999999997643
Q ss_pred CCCCCcceEEEEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC---Cce
Q 004195 550 LDDPSISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE---NFH 625 (769)
Q Consensus 550 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---~~~ 625 (769)
..++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.
T Consensus 103 -------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~ 172 (327)
T 3lm5_A 103 -------EIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGD 172 (327)
T ss_dssp -------EEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCC
T ss_pred -------eEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCc
Confidence 489999999999999998632 34799999999999999999999999 9999999999999987 789
Q ss_pred eeecCCCCchhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHh-hhhhcccc
Q 004195 626 VKINSYNLPLLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKD-LLQVNIGT 703 (769)
Q Consensus 626 ~kl~DFGla~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~-~~~~~~~~ 703 (769)
+||+|||+++....... ....++..|++||.+....++.++|||||||++|||+||+.||.......... +......
T Consensus 173 ~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~- 251 (327)
T 3lm5_A 173 IKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVD- 251 (327)
T ss_dssp EEECCGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC-
T ss_pred EEEeeCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccc-
Confidence 99999999976543322 22334556788999988899999999999999999999999997654332222 1111110
Q ss_pred ccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 704 DEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 704 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
..+.....++ ..+.+++.+||+.||++|||++|+++|+|+..
T Consensus 252 -------~~~~~~~~~~----~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~ 293 (327)
T 3lm5_A 252 -------YSEETFSSVS----QLATDFIQSLLVKNPEKRPTAEICLSHSWLQQ 293 (327)
T ss_dssp -------CCTTTTTTSC----HHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCC
T ss_pred -------cCchhhcccC----HHHHHHHHHHcCCChhhCcCHHHHhCCHhhcc
Confidence 0111112233 34889999999999999999999999999864
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-39 Score=357.08 Aligned_cols=271 Identities=16% Similarity=0.207 Sum_probs=198.0
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.++|...+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++|||||++++++...... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~--~~ 102 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLL--KF 102 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTT--TC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCC--cC
Confidence 457889999999999999999976 6899999999754222 235788999999999999999999999764321 12
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
...|+||||++ |+|.+++.... .+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 103 ~~~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~ 177 (432)
T 3n9x_A 103 DELYIVLEIAD-SDLKKLFKTPI-FLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLAR 177 (432)
T ss_dssp CCEEEEEECCS-EEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred CeEEEEEecCC-cCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCcc
Confidence 45899999996 69999998654 699999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccC------------------------CcceeecCCCcchhhh-ccCCCCCCCCeeehhHHHHHHHhCCCC------
Q 004195 636 LAEARG------------------------KGSAEVSSPAKKTSVL-ARTEQDDKSDVYDIGIILIEIIVGRPI------ 684 (769)
Q Consensus 636 ~~~~~~------------------------~~~~~~~~~~~~pe~~-~~~~~~~ksDVwS~Gvil~elltG~~p------ 684 (769)
...... .....++..|++||.+ ....++.++||||+||++|||++|..|
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~ 257 (432)
T 3n9x_A 178 TINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPT 257 (432)
T ss_dssp EC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGG
T ss_pred cccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccc
Confidence 653321 1223345567889975 456799999999999999999985433
Q ss_pred -----CCCch------------------hHHHHhhhhhccccc--ccccccc-----------CccccC---CCCHHHHH
Q 004195 685 -----TSENV------------------VVLVKDLLQVNIGTD--EARKSIV-----------DPAVMN---ECSDESLK 725 (769)
Q Consensus 685 -----~~~~~------------------~~~~~~~~~~~~~~~--~~~~~~~-----------d~~~~~---~~~~~~~~ 725 (769)
|.+.. ......+... .+.+ +.+..+. ...... ...+....
T Consensus 258 ~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~-~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 336 (432)
T 3n9x_A 258 NRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNI-IGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISD 336 (432)
T ss_dssp GCCCSCCCSCSCC----------CHHHHHHHHHHHHHH-HCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCH
T ss_pred cccccCCCccccccCcccccccccccchHHHHHHHHHh-cCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCH
Confidence 32211 0111111110 0100 0000000 000000 00011234
Q ss_pred HHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 726 RMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 726 ~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.+.+|+.+||+.||++|||++|+++|+|+...
T Consensus 337 ~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~ 368 (432)
T 3n9x_A 337 DGINLLESMLKFNPNKRITIDQALDHPYLKDV 368 (432)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTT
T ss_pred HHHHHHHHHhcCCcccCCCHHHHhcChhhhhc
Confidence 48899999999999999999999999999764
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-39 Score=356.76 Aligned_cols=268 Identities=18% Similarity=0.281 Sum_probs=197.9
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
.|...+.||+|+||.||+|+.. +|+.||||++.... +...+|++++++++|||||+++++|...... ......+
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~-~~~~~~~ 129 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEK-KDEVYLN 129 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETT-TTEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCC-CcceeEE
Confidence 5777899999999999999986 69999999986432 2345799999999999999999998653321 1234567
Q ss_pred EEEeccCCCchhhhhc---CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC-ceeeecCCCCch
Q 004195 560 LIFEYAPNETLRSFIS---GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN-FHVKINSYNLPL 635 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~-~~~kl~DFGla~ 635 (769)
+||||+++ ++.+.+. .....+++..+..++.||++||+|||+. +|+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 99999985 6666554 2334799999999999999999999998 99999999999999955 678999999997
Q ss_pred hhhccC-CcceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchh-HHHHhhhhhcc-cccccc----
Q 004195 636 LAEARG-KGSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVV-VLVKDLLQVNI-GTDEAR---- 707 (769)
Q Consensus 636 ~~~~~~-~~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~-~~~~~~~~~~~-~~~~~~---- 707 (769)
...... .....++..|++||.+.+. .++.++|||||||++|||++|++||..... +.+..++.... ...+.+
T Consensus 206 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~ 285 (420)
T 1j1b_A 206 QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 285 (420)
T ss_dssp ECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHC
T ss_pred hcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhC
Confidence 653322 2233445667889987654 789999999999999999999999976542 22223222110 000000
Q ss_pred ---ccccCccccCC-----CCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 708 ---KSIVDPAVMNE-----CSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 708 ---~~~~d~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.+...|.+... +++....++.+|+.+||+.||++|||+.|+++|+||...
T Consensus 286 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~ 343 (420)
T 1j1b_A 286 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 343 (420)
T ss_dssp SCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred hhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhccc
Confidence 00001111000 111223458999999999999999999999999999654
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-39 Score=351.73 Aligned_cols=253 Identities=22% Similarity=0.341 Sum_probs=191.2
Q ss_pred CCCCcCccccCCceeEEEEEeC--CC--cEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT--DG--TLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~--~g--~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.|...+.||+|+||.||+|+.. ++ ..||||.++.... ...+.+.+|+.++++++|||||+++++|.+.+
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~------ 163 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE------ 163 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCS------
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC------
Confidence 3556789999999999999864 22 4689999875432 22467899999999999999999999986432
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
+..++||||+++|+|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 164 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~ 240 (373)
T 3c1x_A 164 GSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 240 (373)
T ss_dssp SCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC----
T ss_pred CCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccc
Confidence 236899999999999999987666799999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccCC------cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccc
Q 004195 636 LAEARGK------GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARK 708 (769)
Q Consensus 636 ~~~~~~~------~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (769)
....... .....+..|++||.+.+..++.++|||||||++|||+| |.+||...........+....
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~------- 313 (373)
T 3c1x_A 241 DMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR------- 313 (373)
T ss_dssp -----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTC-------
T ss_pred cccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCC-------
Confidence 5533221 11122335788999988899999999999999999999 677776533221111111100
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.+.....+++ .+.+++.+||+.||++|||+.|+++++....
T Consensus 314 ---~~~~p~~~~~----~l~~li~~cl~~dp~~RPs~~ell~~L~~i~ 354 (373)
T 3c1x_A 314 ---RLLQPEYCPD----PLYEVMLKCWHPKAEMRPSFSELVSRISAIF 354 (373)
T ss_dssp ---CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---CCCCCCCCCH----HHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 0111122333 4889999999999999999999999998664
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-39 Score=338.95 Aligned_cols=255 Identities=13% Similarity=0.171 Sum_probs=196.8
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC---hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS---PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~---~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
.++|...+.||+|+||.||+|+.. +++.||||++....... .+.+.+|+.++++++||||+++++++.+.+
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~----- 107 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDG----- 107 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT-----
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCC-----
Confidence 467889999999999999999976 78999999997653333 357889999999999999999999998643
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
..++||||+++++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 108 --~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~ 181 (309)
T 2h34_A 108 --QLYVDMRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIA 181 (309)
T ss_dssp --EEEEEEECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-
T ss_pred --eEEEEEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccC
Confidence 4899999999999999998543 689999999999999999999999 9999999999999999999999999998
Q ss_pred hhhhccCC---cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccccccc
Q 004195 635 LLAEARGK---GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIV 711 (769)
Q Consensus 635 ~~~~~~~~---~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (769)
........ ....++..|.+||.+.+..++.++||||||+++|||+||+.||...........+.......
T Consensus 182 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~------- 254 (309)
T 2h34_A 182 SATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRP------- 254 (309)
T ss_dssp ---------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCCG-------
T ss_pred ccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCCc-------
Confidence 65543221 12234456788999888889999999999999999999999998765443333222111100
Q ss_pred CccccCCCCHHHHHHHHHHHHHcCcCCCCCCC-CHHHHHHHhHhhh
Q 004195 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRP-SVEDTLWNLQFAT 756 (769)
Q Consensus 712 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~l~~~~ 756 (769)
......+++ .+.+++.+||+.||++|| +++++++.++.+.
T Consensus 255 -~~~~~~~~~----~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l 295 (309)
T 2h34_A 255 -STVRPGIPV----AFDAVIARGMAKNPEDRYVTCGDLSAAAHAAL 295 (309)
T ss_dssp -GGTSTTCCT----HHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTC
T ss_pred -cccCCCCCH----HHHHHHHHhccCCHHHHHHhHHHHHHHHHHHH
Confidence 011122333 388999999999999999 9999999887653
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-39 Score=338.58 Aligned_cols=256 Identities=16% Similarity=0.239 Sum_probs=187.1
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC-h-hHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS-P-HMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~-~-~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.++|+..+.||+|+||.||+|+.. +|+.||||+++...... . +.+.++...++.++||||+++++++.+...
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~----- 80 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGD----- 80 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSS-----
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCC-----
Confidence 357888999999999999999975 79999999997542211 1 233444555788899999999999986443
Q ss_pred ceEEEEEeccCCCchhhhhc---CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCC
Q 004195 556 SIIYLIFEYAPNETLRSFIS---GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYN 632 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFG 632 (769)
.++||||++ |+|.+++. .....+++..+..++.|++.||+|||+. .+|+||||||+||+++.++.+||+|||
T Consensus 81 --~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg 155 (290)
T 3fme_A 81 --VWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFG 155 (290)
T ss_dssp --EEEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH--SCCCCCCCSGGGCEECTTCCEEBCCC-
T ss_pred --EEEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeecC
Confidence 899999997 58887775 2344799999999999999999999984 289999999999999999999999999
Q ss_pred CchhhhccCC-cceeecCCCcchhhh----ccCCCCCCCCeeehhHHHHHHHhCCCCCCCch--hHHHHhhhhhcccccc
Q 004195 633 LPLLAEARGK-GSAEVSSPAKKTSVL----ARTEQDDKSDVYDIGIILIEIIVGRPITSENV--VVLVKDLLQVNIGTDE 705 (769)
Q Consensus 633 la~~~~~~~~-~~~~~~~~~~~pe~~----~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~--~~~~~~~~~~~~~~~~ 705 (769)
+++....... ....++..|++||.+ ....++.++|||||||++|||+||+.||.... ...........
T Consensus 156 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~----- 230 (290)
T 3fme_A 156 ISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEP----- 230 (290)
T ss_dssp --------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSC-----
T ss_pred CcccccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccC-----
Confidence 9976543322 222455667889985 45678999999999999999999999997422 22222211110
Q ss_pred ccccccCccc-cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 706 ARKSIVDPAV-MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 706 ~~~~~~d~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
.+.. ...+++ ++.+++.+||+.||++|||+.|+++|+||.....
T Consensus 231 ------~~~~~~~~~~~----~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~~~ 275 (290)
T 3fme_A 231 ------SPQLPADKFSA----EFVDFTSQCLKKNSKERPTYPELMQHPFFTLHES 275 (290)
T ss_dssp ------CCCCCTTTSCH----HHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHHH
T ss_pred ------CCCcccccCCH----HHHHHHHHHhhcChhhCcCHHHHHhCcccccCcc
Confidence 0111 112333 4889999999999999999999999999986543
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-39 Score=342.20 Aligned_cols=253 Identities=18% Similarity=0.263 Sum_probs=201.5
Q ss_pred cCCCCcCccccCCceeEEEEEe------CCCcEEEEEEccccCC-CChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKL------TDGTLVAIRSLKMSKK-SSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLD 551 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~ 551 (769)
++|...+.||+|+||.||+|+. .+++.||||+++.... ...+.+.+|+++++++ +||||++++++|.+.+.
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~- 101 (313)
T 1t46_A 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP- 101 (313)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS-
T ss_pred hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC-
Confidence 5678889999999999999984 2578999999975432 2246789999999999 89999999999976443
Q ss_pred CCCcceEEEEEeccCCCchhhhhcCCC-----------------CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCcc
Q 004195 552 DPSISIIYLIFEYAPNETLRSFISGPG-----------------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLK 614 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~-----------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlK 614 (769)
.++||||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+|||||
T Consensus 102 ------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlk 172 (313)
T 1t46_A 102 ------TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLA 172 (313)
T ss_dssp ------CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred ------cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCc
Confidence 799999999999999997432 2489999999999999999999999 99999999
Q ss_pred ccceeeCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCch
Q 004195 615 ITDVLLDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENV 689 (769)
Q Consensus 615 p~NILld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~ 689 (769)
|+||+++.++.+||+|||+++....... ....++..|++||.+.+..++.++|||||||++|||+| |+.||....
T Consensus 173 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 252 (313)
T 1t46_A 173 ARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP 252 (313)
T ss_dssp GGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred cceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCccc
Confidence 9999999999999999999976543322 12223345888998888899999999999999999999 999987543
Q ss_pred hH-HHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 690 VV-LVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 690 ~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.. .....+... ..+.....+++ .+.+++.+||+.||++|||+.|+++++....
T Consensus 253 ~~~~~~~~~~~~----------~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 306 (313)
T 1t46_A 253 VDSKFYKMIKEG----------FRMLSPEHAPA----EMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306 (313)
T ss_dssp SSHHHHHHHHHT----------CCCCCCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred chhHHHHHhccC----------CCCCCcccCCH----HHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 21 121211111 11111122333 4889999999999999999999999998654
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-39 Score=336.66 Aligned_cols=258 Identities=22% Similarity=0.348 Sum_probs=203.5
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCC----
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD---- 552 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~---- 552 (769)
..++|+..+.||+|+||.||+|+.. +|+.||||+++.. .+.+.+|++++++++||||+++++++.....+.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN----NEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECC----SGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccc----cHHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 3456888999999999999999986 7999999999743 256889999999999999999999886422110
Q ss_pred -----CCcceEEEEEeccCCCchhhhhcC-CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCcee
Q 004195 553 -----PSISIIYLIFEYAPNETLRSFISG-PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHV 626 (769)
Q Consensus 553 -----~~~~~~~lV~Ey~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ 626 (769)
......++||||+++|+|.+++.. ....+++..+..++.|+++||+|||+. +|+||||||+||++++++.+
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCE
Confidence 123457999999999999999973 234689999999999999999999999 99999999999999999999
Q ss_pred eecCCCCchhhhccC-CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccc
Q 004195 627 KINSYNLPLLAEARG-KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDE 705 (769)
Q Consensus 627 kl~DFGla~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (769)
||+|||++....... .....++..|.+||...+..++.++|||||||++|||+||..|+..... .....
T Consensus 162 kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~-~~~~~--------- 231 (284)
T 2a19_B 162 KIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSK-FFTDL--------- 231 (284)
T ss_dssp EECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHH-HHHHH---------
T ss_pred EECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHH-HHHHh---------
Confidence 999999986654332 2223345677889999888899999999999999999999988743211 11110
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhccc
Q 004195 706 ARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQGL 761 (769)
Q Consensus 706 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~~ 761 (769)
.+..+...+++ .+.+++.+||+.||++|||+.|++++++.....++.
T Consensus 232 -----~~~~~~~~~~~----~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~ 278 (284)
T 2a19_B 232 -----RDGIISDIFDK----KEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEK 278 (284)
T ss_dssp -----HTTCCCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC----
T ss_pred -----hcccccccCCH----HHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCc
Confidence 01111122333 378999999999999999999999999988665443
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-39 Score=345.71 Aligned_cols=269 Identities=21% Similarity=0.332 Sum_probs=204.5
Q ss_pred cCHHHHHHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhc-cCCceeeEeeeeec
Q 004195 470 FTLDELKEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKL-RHSNLVSALGHCLD 547 (769)
Q Consensus 470 ~~~~el~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~ 547 (769)
+++.++....++|...+.||+|+||.||+|+.. +|+.||||++.... ...+.+.+|+.+++++ +||||+++++++..
T Consensus 14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 92 (326)
T 2x7f_A 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIK 92 (326)
T ss_dssp --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence 344455566788999999999999999999975 79999999997543 3457899999999999 79999999999976
Q ss_pred cCCCCCCcceEEEEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCcee
Q 004195 548 FSLDDPSISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHV 626 (769)
Q Consensus 548 ~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ 626 (769)
.... ......++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 93 ~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~ 168 (326)
T 2x7f_A 93 KNPP-GMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEV 168 (326)
T ss_dssp CC---CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCE
T ss_pred ccCc-cccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCE
Confidence 4321 1134689999999999999999743 34689999999999999999999999 99999999999999999999
Q ss_pred eecCCCCchhhhccC--CcceeecCCCcchhhhc-----cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhh
Q 004195 627 KINSYNLPLLAEARG--KGSAEVSSPAKKTSVLA-----RTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQV 699 (769)
Q Consensus 627 kl~DFGla~~~~~~~--~~~~~~~~~~~~pe~~~-----~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~ 699 (769)
||+|||++....... .....++..|.+||.+. ...++.++|||||||++|||+||+.||...........+..
T Consensus 169 kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 248 (326)
T 2x7f_A 169 KLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR 248 (326)
T ss_dssp EECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH
T ss_pred EEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhc
Confidence 999999986553321 12223455678898875 46789999999999999999999999976443222111111
Q ss_pred ccccccccccccCccc-cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 700 NIGTDEARKSIVDPAV-MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 700 ~~~~~~~~~~~~d~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
. ..+.. ...+++ .+.+++.+||+.||++||+++|+++|+|+...
T Consensus 249 ~----------~~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~ 293 (326)
T 2x7f_A 249 N----------PAPRLKSKKWSK----KFQSFIESCLVKNHSQRPATEQLMKHPFIRDQ 293 (326)
T ss_dssp S----------CCCCCSCSCSCH----HHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCC
T ss_pred C----------ccccCCccccCH----HHHHHHHHHhccChhhCCCHHHHhhChHHhhC
Confidence 0 00111 122333 48899999999999999999999999998643
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-39 Score=352.10 Aligned_cols=254 Identities=18% Similarity=0.239 Sum_probs=198.9
Q ss_pred cCCCCcCccccCCceeEEEEEe----CCCcEEEEEEccccC----CCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKL----TDGTLVAIRSLKMSK----KSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSL 550 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~----~~g~~vAvK~~~~~~----~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~ 550 (769)
++|...+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|+++++++ +||||+++++++.+..
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~- 132 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET- 132 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT-
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc-
Confidence 5688899999999999999997 368999999997532 23446678899999999 5999999999987643
Q ss_pred CCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecC
Q 004195 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINS 630 (769)
Q Consensus 551 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~D 630 (769)
..++||||+++|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 133 ------~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~D 202 (355)
T 1vzo_A 133 ------KLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTD 202 (355)
T ss_dssp ------EEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESC
T ss_pred ------eEEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEee
Confidence 4899999999999999997543 689999999999999999999998 999999999999999999999999
Q ss_pred CCCchhhhccC---CcceeecCCCcchhhhcc--CCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhccccc
Q 004195 631 YNLPLLAEARG---KGSAEVSSPAKKTSVLAR--TEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIGTD 704 (769)
Q Consensus 631 FGla~~~~~~~---~~~~~~~~~~~~pe~~~~--~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~~~ 704 (769)
||+++...... .....++..|++||.+.+ ..++.++|||||||++|||+||+.||...... ....+......
T Consensus 203 fG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~-- 280 (355)
T 1vzo_A 203 FGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK-- 280 (355)
T ss_dssp SSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHH--
T ss_pred CCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhc--
Confidence 99986542221 122335567888998865 34789999999999999999999998643211 11111111000
Q ss_pred cccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCC-----CHHHHHHHhHhhh
Q 004195 705 EARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRP-----SVEDTLWNLQFAT 756 (769)
Q Consensus 705 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~~~~ 756 (769)
..+.....++ ..+.+++.+||+.||++|| +++|+++|+||..
T Consensus 281 ------~~~~~~~~~~----~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~ 327 (355)
T 1vzo_A 281 ------SEPPYPQEMS----ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK 327 (355)
T ss_dssp ------CCCCCCTTSC----HHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTT
T ss_pred ------cCCCCCcccC----HHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhc
Confidence 0112222333 3488999999999999999 9999999999975
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-38 Score=336.07 Aligned_cols=257 Identities=16% Similarity=0.247 Sum_probs=200.6
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC----CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK----KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~----~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
.++|...+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---- 79 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEE---- 79 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC-----
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC----
Confidence 468999999999999999999975 68999999997542 233567999999999999999999999986422
Q ss_pred CcceEEEEEeccCCCchhhhhc-CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFIS-GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYN 632 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFG 632 (769)
....++||||++++ |.+++. .....+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 80 -~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg 154 (305)
T 2wtk_C 80 -KQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALG 154 (305)
T ss_dssp ---CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCT
T ss_pred -CCeEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccc
Confidence 23489999999876 666665 3344799999999999999999999999 99999999999999999999999999
Q ss_pred CchhhhccCC----cceeecCCCcchhhhccCC--CCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccc
Q 004195 633 LPLLAEARGK----GSAEVSSPAKKTSVLARTE--QDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEA 706 (769)
Q Consensus 633 la~~~~~~~~----~~~~~~~~~~~pe~~~~~~--~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (769)
++........ ....++..|.+||...+.. ++.++|||||||++|||++|+.||...........+...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~------ 228 (305)
T 2wtk_C 155 VAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKG------ 228 (305)
T ss_dssp TCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHC------
T ss_pred cccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcC------
Confidence 9865432211 1223445677888876543 377999999999999999999999865433222211110
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 707 RKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 707 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
...+...++++ +.+++.+||+.||++|||++|+++|+|+.....
T Consensus 229 -----~~~~~~~~~~~----l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~ 272 (305)
T 2wtk_C 229 -----SYAIPGDCGPP----LSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP 272 (305)
T ss_dssp -----CCCCCSSSCHH----HHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCC
T ss_pred -----CCCCCCccCHH----HHHHHHHHccCChhhCCCHHHHhcCcccccCCC
Confidence 01122234443 889999999999999999999999999976543
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-39 Score=341.77 Aligned_cols=254 Identities=23% Similarity=0.383 Sum_probs=200.4
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcE--EEEEEccccC-CCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTL--VAIRSLKMSK-KSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~--vAvK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~ 554 (769)
++|...+.||+|+||.||+|+.. +|.. ||||.++... ....+.+.+|+++++++ +||||+++++++.+.+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~----- 99 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG----- 99 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT-----
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCC-----
Confidence 46888899999999999999965 5664 4999987532 33456799999999999 8999999999997643
Q ss_pred cceEEEEEeccCCCchhhhhcCCC---------------CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCcccccee
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPG---------------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVL 619 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NIL 619 (769)
..++||||+++|+|.+++.... ..+++..++.++.|+++||+|||+. +|+||||||+||+
T Consensus 100 --~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl 174 (327)
T 1fvr_A 100 --YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNIL 174 (327)
T ss_dssp --EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred --ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEE
Confidence 4899999999999999997543 3689999999999999999999999 9999999999999
Q ss_pred eCCCceeeecCCCCchhhhccCCcc-eeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhh
Q 004195 620 LDENFHVKINSYNLPLLAEARGKGS-AEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLL 697 (769)
Q Consensus 620 ld~~~~~kl~DFGla~~~~~~~~~~-~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~ 697 (769)
++.++.+||+|||+++......... ...+..|.+||.+....++.++|||||||++|||+| |+.||...........+
T Consensus 175 ~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~ 254 (327)
T 1fvr_A 175 VGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 254 (327)
T ss_dssp ECGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHG
T ss_pred EcCCCeEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHh
Confidence 9999999999999986443322222 223446788999888888999999999999999998 99999765443322211
Q ss_pred hhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 698 QVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 698 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
... ..+.....+++ .+.+++.+||+.||++|||++|+++++....+
T Consensus 255 ~~~----------~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 300 (327)
T 1fvr_A 255 PQG----------YRLEKPLNCDD----EVYDLMRQCWREKPYERPSFAQILVSLNRMLE 300 (327)
T ss_dssp GGT----------CCCCCCTTBCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hcC----------CCCCCCCCCCH----HHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 110 01111122333 48899999999999999999999999987654
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-39 Score=334.16 Aligned_cols=251 Identities=24% Similarity=0.360 Sum_probs=202.3
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
++|...+.||+|+||.||+|+..++..||||.++... ...+.+.+|++++++++||||+++++++.+.. .+
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--------~~ 83 (279)
T 1qpc_A 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP--------IY 83 (279)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--------CE
T ss_pred HhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcCCC--------cE
Confidence 5678889999999999999998888899999997543 34678999999999999999999999986422 68
Q ss_pred EEEeccCCCchhhhhcCCC-CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 560 LIFEYAPNETLRSFISGPG-YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
+||||+++++|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||++....
T Consensus 84 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 160 (279)
T 1qpc_A 84 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIE 160 (279)
T ss_dssp EEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCccccccc
Confidence 9999999999999997432 2589999999999999999999999 99999999999999999999999999997654
Q ss_pred ccCC---cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCcc
Q 004195 639 ARGK---GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 639 ~~~~---~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
.... ....++..|.+||......++.++|||||||++|||+| |+.||...........+... ..+.
T Consensus 161 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~----------~~~~ 230 (279)
T 1qpc_A 161 DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG----------YRMV 230 (279)
T ss_dssp SSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT----------CCCC
T ss_pred CcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcc----------cCCC
Confidence 3221 11223345788999888889999999999999999999 89998765433322211111 0111
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
....+++ .+.+++.+|++.||++|||++++++.+....
T Consensus 231 ~~~~~~~----~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 268 (279)
T 1qpc_A 231 RPDNCPE----ELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268 (279)
T ss_dssp CCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CcccccH----HHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence 1123333 4889999999999999999999999887553
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-39 Score=373.97 Aligned_cols=252 Identities=17% Similarity=0.217 Sum_probs=206.8
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc---CCCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS---KKSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~ 553 (769)
.++|+..+.||+|+||.||+|+.. +++.||||+++.. .....+.+.+|..++..+ +||+|+++++++.+.+
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~---- 415 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD---- 415 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSS----
T ss_pred ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCC----
Confidence 467999999999999999999976 6899999999753 234456788899999988 7999999999987633
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
..|+||||+++|+|.+++...+ .+++..+..|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 416 ---~~~lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGl 488 (674)
T 3pfq_A 416 ---RLYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGM 488 (674)
T ss_dssp ---EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTT
T ss_pred ---EEEEEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecce
Confidence 4899999999999999998544 699999999999999999999999 999999999999999999999999999
Q ss_pred chhhhc--cCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccccccc
Q 004195 634 PLLAEA--RGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIV 711 (769)
Q Consensus 634 a~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (769)
++.... .......++..|++||.+.+..|+.++|||||||++|||+||++||...........+.. .
T Consensus 489 a~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~---~-------- 557 (674)
T 3pfq_A 489 CKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME---H-------- 557 (674)
T ss_dssp CEECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHS---S--------
T ss_pred eeccccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHh---C--------
Confidence 975322 222334456778899999889999999999999999999999999987554332221111 0
Q ss_pred CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCH-----HHHHHHhHhhh
Q 004195 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSV-----EDTLWNLQFAT 756 (769)
Q Consensus 712 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~~l~~~~ 756 (769)
...+....+ .++.+|+.+||+.||++||++ +||++|+||..
T Consensus 558 ~~~~p~~~s----~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~ 603 (674)
T 3pfq_A 558 NVAYPKSMS----KEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY 603 (674)
T ss_dssp CCCCCTTSC----HHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSS
T ss_pred CCCCCccCC----HHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccC
Confidence 011112233 348999999999999999998 99999999964
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=342.02 Aligned_cols=263 Identities=20% Similarity=0.289 Sum_probs=198.8
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCC------
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSL------ 550 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~------ 550 (769)
..++|+..+.||+|+||.||+|+.. +|+.||||++... ....+.+.+|++++++++||||+++++++.+...
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 3567889999999999999999975 7999999999643 2234678899999999999999999999865321
Q ss_pred CCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecC
Q 004195 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINS 630 (769)
Q Consensus 551 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~D 630 (769)
........++||||+++|+|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEee
Confidence 00124568999999999999999986555788999999999999999999999 999999999999999999999999
Q ss_pred CCCchhhhcc----------------CCcceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCch-hHH
Q 004195 631 YNLPLLAEAR----------------GKGSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENV-VVL 692 (769)
Q Consensus 631 FGla~~~~~~----------------~~~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~-~~~ 692 (769)
||+++..... ......++..|.+||.+.+. .++.++|||||||++|||++ |+.... ...
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~ 236 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVN 236 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHH
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHH
Confidence 9998654321 11222345567889987654 68999999999999999998 443221 111
Q ss_pred HHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 693 VKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
....+.. . .......++......+.+++.+||+.||++|||+.|+++|+|+....
T Consensus 237 ~~~~~~~---~--------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 291 (303)
T 1zy4_A 237 ILKKLRS---V--------SIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKH 291 (303)
T ss_dssp HHHHHHS---T--------TCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCCC
T ss_pred HHHhccc---c--------ccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCCC
Confidence 1111110 0 01111122233334588999999999999999999999999996543
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-39 Score=353.81 Aligned_cols=270 Identities=16% Similarity=0.249 Sum_probs=197.1
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
.+|...+.||+|+||.||+|+...+..||+|++.... ....+|+++++.++|||||+++++|..... .......+
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~----~~~~~E~~il~~l~h~niv~l~~~~~~~~~-~~~~~~~~ 114 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK----RFKNRELQIMRIVKHPNVVDLKAFFYSNGD-KKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEESS-SSSCEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCc----chHHHHHHHHHhCCCCCcceEEEEEEecCC-CCCceEEE
Confidence 3578889999999999999998776679999886432 223479999999999999999999976442 12244578
Q ss_pred EEEeccCCCchhhhhc--CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeC-CCceeeecCCCCchh
Q 004195 560 LIFEYAPNETLRSFIS--GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD-ENFHVKINSYNLPLL 636 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld-~~~~~kl~DFGla~~ 636 (769)
+||||++++.+..... .....+++..+..++.|+++||+|||+. +|+||||||+|||++ .++.+||+|||+++.
T Consensus 115 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~ 191 (394)
T 4e7w_A 115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKI 191 (394)
T ss_dssp EEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence 9999998654443332 2234789999999999999999999999 999999999999999 799999999999976
Q ss_pred hhccCC-cceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhccc-cccccc----
Q 004195 637 AEARGK-GSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIG-TDEARK---- 708 (769)
Q Consensus 637 ~~~~~~-~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~-~~~~~~---- 708 (769)
...... ....++..|++||.+.+. .++.++|||||||++|||++|++||.+.... ....++..... ..+.+.
T Consensus 192 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~ 271 (394)
T 4e7w_A 192 LIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNP 271 (394)
T ss_dssp CCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCG
T ss_pred ccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhCh
Confidence 533322 223345567889987654 5899999999999999999999999765432 22222221100 000000
Q ss_pred ---cccCcccc-----CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 709 ---SIVDPAVM-----NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 709 ---~~~d~~~~-----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
...-+... ..+++....++.+++.+||+.||++|||+.|+++|+||..-
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 328 (394)
T 4e7w_A 272 NYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDEL 328 (394)
T ss_dssp GGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTT
T ss_pred hhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhh
Confidence 00000000 00111123458999999999999999999999999999754
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-39 Score=340.32 Aligned_cols=268 Identities=16% Similarity=0.285 Sum_probs=196.3
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCC-------
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLD------- 551 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~------- 551 (769)
++|...+.||+|+||.||+|+.. +|+.||||++........+.+.+|++++++++||||+++++++......
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 56888999999999999999976 5999999999765444456789999999999999999999998543210
Q ss_pred CCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeC-CCceeeecC
Q 004195 552 DPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD-ENFHVKINS 630 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld-~~~~~kl~D 630 (769)
.......++||||++ |+|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||+++ +++.+||+|
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~D 164 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLEQG--PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGD 164 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEECC
T ss_pred ccccCceeEEeeccC-CCHHHHhhcC--CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEEcc
Confidence 012356899999997 6999999753 589999999999999999999999 999999999999997 567999999
Q ss_pred CCCchhhhccC-----CcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccc-
Q 004195 631 YNLPLLAEARG-----KGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGT- 703 (769)
Q Consensus 631 FGla~~~~~~~-----~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~- 703 (769)
||+++...... .....++..|++||.... ..++.++|||||||++|||+||+.||...........+......
T Consensus 165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 244 (320)
T 2i6l_A 165 FGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVV 244 (320)
T ss_dssp CTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCC
T ss_pred CccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence 99997653221 112223455778887755 67899999999999999999999999765432221111111100
Q ss_pred -ccccccc------------cCc-----cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 704 -DEARKSI------------VDP-----AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 704 -~~~~~~~------------~d~-----~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.+...++ ..+ .....++ .++.+++.+||+.||++|||++|+++|+|+...
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 312 (320)
T 2i6l_A 245 HEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGIS----REAVDFLEQILTFSPMDRLTAEEALSHPYMSIY 312 (320)
T ss_dssp CHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCC----HHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTT
T ss_pred chhhhhhhhhcCcccccccccCCCCChhHhcchhh----HHHHHHHHHHcCCCccccCCHHHHhCCcccccc
Confidence 0000000 000 0111223 448999999999999999999999999999754
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-39 Score=337.16 Aligned_cols=252 Identities=19% Similarity=0.305 Sum_probs=196.3
Q ss_pred hcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
.++|+..+.||+|+||.||+|+.. |+.||||+++.. ...+.+.+|++++++++||||+++++++.+.. +..
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------~~~ 90 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEK------GGL 90 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--------CC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC------Cce
Confidence 356888999999999999999875 889999999753 24567999999999999999999999976532 237
Q ss_pred EEEEeccCCCchhhhhcCCC-CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 559 YLIFEYAPNETLRSFISGPG-YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
++||||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~ 167 (278)
T 1byg_A 91 YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 167 (278)
T ss_dssp EEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC----
T ss_pred EEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccc
Confidence 99999999999999997432 2378999999999999999999999 9999999999999999999999999998755
Q ss_pred hccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCcccc
Q 004195 638 EARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM 716 (769)
Q Consensus 638 ~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 716 (769)
..... ....+..|.+||...+..++.++||||||+++|||+| |++||...........+... ..+...
T Consensus 168 ~~~~~-~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~----------~~~~~~ 236 (278)
T 1byg_A 168 SSTQD-TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG----------YKMDAP 236 (278)
T ss_dssp ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTT----------CCCCCC
T ss_pred ccccc-CCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC----------CCCCCc
Confidence 43222 2233456888999888889999999999999999998 99998765433222211110 111222
Q ss_pred CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 717 NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 717 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
..+++ .+.+++.+||+.||++|||+.|+++.+.....
T Consensus 237 ~~~~~----~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 237 DGCPP----AVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp TTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccCCH----HHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence 23344 48899999999999999999999999987654
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-39 Score=344.85 Aligned_cols=259 Identities=19% Similarity=0.245 Sum_probs=204.2
Q ss_pred HHHHHHhcCCCCcCccccCCceeEEEEEeC------CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeee
Q 004195 473 DELKEATDCFDSSSFMCDASHGQIYKGKLT------DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHC 545 (769)
Q Consensus 473 ~el~~~t~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~ 545 (769)
++.....++|...+.||+|+||.||+|+.. +++.||||.+..... .....+.+|++++++++||||+++++++
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 334445678999999999999999999854 377899999975432 1234688999999999999999999999
Q ss_pred eccCCCCCCcceEEEEEeccCCCchhhhhcCC---------CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCcccc
Q 004195 546 LDFSLDDPSISIIYLIFEYAPNETLRSFISGP---------GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKIT 616 (769)
Q Consensus 546 ~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~---------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~ 616 (769)
.+... .++||||+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+
T Consensus 98 ~~~~~-------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~ 167 (322)
T 1p4o_A 98 SQGQP-------TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAAR 167 (322)
T ss_dssp CSSSS-------CEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGG
T ss_pred ccCCc-------cEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccc
Confidence 76443 79999999999999998631 13579999999999999999999999 9999999999
Q ss_pred ceeeCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhH
Q 004195 617 DVLLDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVV 691 (769)
Q Consensus 617 NILld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~ 691 (769)
||+++.++.+||+|||+++....... .....+..|++||.+.+..++.++|||||||++|||+| |+.||......
T Consensus 168 NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~ 247 (322)
T 1p4o_A 168 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 247 (322)
T ss_dssp GEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH
T ss_pred eEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH
Confidence 99999999999999999975533221 12223445788999888889999999999999999999 88888765433
Q ss_pred HHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 692 LVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
.....+.... .+.....+++ .+.+++.+||+.||++|||+.|+++++...
T Consensus 248 ~~~~~~~~~~----------~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~e~l~~L~~~ 297 (322)
T 1p4o_A 248 QVLRFVMEGG----------LLDKPDNCPD----MLFELMRMCWQYNPKMRPSFLEIISSIKEE 297 (322)
T ss_dssp HHHHHHHTTC----------CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred HHHHHHHcCC----------cCCCCCCCCH----HHHHHHHHHcCCCcccCcCHHHHHHHHHHh
Confidence 3322221100 0111123333 488999999999999999999999998754
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-38 Score=345.72 Aligned_cols=270 Identities=16% Similarity=0.242 Sum_probs=199.5
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.++|...+.||+|+||.||+|+.. +|+.||||++....... .+.+.+|+.++++++||||+++++++...+... ..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~-~~ 119 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLR-NF 119 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSST-TC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcc-cc
Confidence 356888899999999999999975 69999999997543222 357889999999999999999999997644311 11
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
...++||||++ ++|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 192 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLAR 192 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC-
T ss_pred eeEEEEEcccc-ccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCccc
Confidence 23599999997 689888853 489999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccCCcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhcccccccc-ccc--
Q 004195 636 LAEARGKGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTDEAR-KSI-- 710 (769)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~~~~-~~~-- 710 (769)
....... ...++..|++||.+.+ ..++.++|||||||++|||+||+.||....... ...+........... ..+
T Consensus 193 ~~~~~~~-~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 271 (371)
T 4exu_A 193 HADAEMT-GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLND 271 (371)
T ss_dssp --------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSC
T ss_pred ccccCcC-CcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhh
Confidence 6543322 2234566788998876 678999999999999999999999997654322 222211110000000 000
Q ss_pred ---------cCccccC---CCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 711 ---------VDPAVMN---ECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 711 ---------~d~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
....... ...+.....+.+++.+||+.||++|||++|+++|+||...
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 330 (371)
T 4exu_A 272 KAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF 330 (371)
T ss_dssp HHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred hhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccC
Confidence 0000000 0011123458999999999999999999999999999754
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-39 Score=337.76 Aligned_cols=259 Identities=13% Similarity=0.239 Sum_probs=203.5
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC---------ChhHHHHHHHHHhhcc-CCceeeEeeeee
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS---------SPHMYTYHIELISKLR-HSNLVSALGHCL 546 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~---------~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~ 546 (769)
..++|...+.||+|+||.||+|+.. +|+.||||+++..... ..+.+.+|++++++++ ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 3467889999999999999999976 6899999999754321 1245788999999996 999999999997
Q ss_pred ccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCcee
Q 004195 547 DFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHV 626 (769)
Q Consensus 547 ~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ 626 (769)
+.. ..++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 95 ~~~-------~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~ 163 (298)
T 1phk_A 95 TNT-------FFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNI 163 (298)
T ss_dssp CSS-------EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCE
T ss_pred cCC-------eEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcE
Confidence 633 4899999999999999997543 689999999999999999999999 99999999999999999999
Q ss_pred eecCCCCchhhhccCC-cceeecCCCcchhhhc------cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhh
Q 004195 627 KINSYNLPLLAEARGK-GSAEVSSPAKKTSVLA------RTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQV 699 (769)
Q Consensus 627 kl~DFGla~~~~~~~~-~~~~~~~~~~~pe~~~------~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~ 699 (769)
||+|||++........ ....++..|.+||.+. ...++.++||||||+++|||++|+.||...........+..
T Consensus 164 kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~ 243 (298)
T 1phk_A 164 KLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMS 243 (298)
T ss_dssp EECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred EEecccchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhc
Confidence 9999999865543222 2223445677888764 45688999999999999999999999876543322221111
Q ss_pred ccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 700 NIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 700 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
... .. .......++ ..+.+++.+||+.||++|||+.|+++|+||....
T Consensus 244 ~~~------~~-~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 291 (298)
T 1phk_A 244 GNY------QF-GSPEWDDYS----DTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV 291 (298)
T ss_dssp TCC------CC-CTTTGGGSC----HHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred CCc------cc-CcccccccC----HHHHHHHHHHccCCcccCCCHHHHHhChHhhhcc
Confidence 100 00 001111233 3488999999999999999999999999997543
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-39 Score=342.47 Aligned_cols=256 Identities=18% Similarity=0.279 Sum_probs=199.0
Q ss_pred cCCCCcCccccCCceeEEEEEe------CCCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKL------TDGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD 552 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~ 552 (769)
++|...+.||+|+||.||+|+. .+++.||||++..... ....++.+|+.++++++||||+++++++.+...
T Consensus 30 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-- 107 (327)
T 2yfx_A 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP-- 107 (327)
T ss_dssp GGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS--
T ss_pred hheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC--
Confidence 5688899999999999999984 2577999999974322 224578899999999999999999999986443
Q ss_pred CCcceEEEEEeccCCCchhhhhcCCC------CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC---C
Q 004195 553 PSISIIYLIFEYAPNETLRSFISGPG------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE---N 623 (769)
Q Consensus 553 ~~~~~~~lV~Ey~~~gsL~~~l~~~~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---~ 623 (769)
.++||||+++|+|.+++.... ..+++..++.++.|+++||+|||+. +|+||||||+||+++. +
T Consensus 108 -----~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~ 179 (327)
T 2yfx_A 108 -----RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPG 179 (327)
T ss_dssp -----CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTT
T ss_pred -----cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCc
Confidence 699999999999999997332 3589999999999999999999999 9999999999999984 4
Q ss_pred ceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhh
Q 004195 624 FHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQ 698 (769)
Q Consensus 624 ~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~ 698 (769)
..+||+|||+++....... ....++..|++||.+....++.++|||||||++|||+| |+.||...........+.
T Consensus 180 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~ 259 (327)
T 2yfx_A 180 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT 259 (327)
T ss_dssp CCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH
T ss_pred ceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHh
Confidence 5699999999875533221 11222345788999888899999999999999999999 999987654433322221
Q ss_pred hccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 699 VNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 699 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
... .+.....+++ .+.+++.+||+.||++||++.|+++++++....+
T Consensus 260 ~~~----------~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 260 SGG----------RMDPPKNCPG----PVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp TTC----------CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred cCC----------CCCCCCCCCH----HHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 110 0111123333 4889999999999999999999999999876544
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-38 Score=337.40 Aligned_cols=275 Identities=17% Similarity=0.286 Sum_probs=206.2
Q ss_pred HHhcCCCCcCccccCCceeEEEEEe--CCCcEEEEEEccccCC--CChhHHHHHHHHHhhc---cCCceeeEeeeeeccC
Q 004195 477 EATDCFDSSSFMCDASHGQIYKGKL--TDGTLVAIRSLKMSKK--SSPHMYTYHIELISKL---RHSNLVSALGHCLDFS 549 (769)
Q Consensus 477 ~~t~~f~~~~~iG~G~~g~Vy~~~~--~~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l---~H~nIv~l~~~~~~~~ 549 (769)
++.++|...+.||+|+||.||+|+. .+|+.||||+++.... .....+.+|+.+++++ +||||++++++|....
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 4567899999999999999999997 3688999999975432 2234678888888777 7999999999987322
Q ss_pred CCCCCcceEEEEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeee
Q 004195 550 LDDPSISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKI 628 (769)
Q Consensus 550 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl 628 (769)
. ......++||||++ |+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||
T Consensus 88 ~--~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl 161 (326)
T 1blx_A 88 T--DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKL 161 (326)
T ss_dssp C--SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEE
T ss_pred c--CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEE
Confidence 1 12356899999998 6999998743 33589999999999999999999999 9999999999999999999999
Q ss_pred cCCCCchhhhccC-CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhc-ccccc
Q 004195 629 NSYNLPLLAEARG-KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVN-IGTDE 705 (769)
Q Consensus 629 ~DFGla~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~-~~~~~ 705 (769)
+|||+++...... .....++..|++||...+..++.++|||||||++|||+||++||....... ...+.... .....
T Consensus 162 ~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 241 (326)
T 1blx_A 162 ADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 241 (326)
T ss_dssp CSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGG
T ss_pred ecCcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcc
Confidence 9999997654322 222334566788999888889999999999999999999999997654322 22222110 00011
Q ss_pred ccccc-------cC---ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 706 ARKSI-------VD---PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 706 ~~~~~-------~d---~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.+... +. ..............+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~ 303 (326)
T 1blx_A 242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL 303 (326)
T ss_dssp GSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTC
T ss_pred cCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCcccccc
Confidence 11000 00 000011111223448899999999999999999999999999754
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-39 Score=343.70 Aligned_cols=264 Identities=18% Similarity=0.300 Sum_probs=201.7
Q ss_pred cCCCCcCccccCCceeEEEEEe-----CCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKL-----TDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~-----~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
++|...+.||+|+||.||+|++ .+|+.||||++........+.+.+|++++++++||||+++++++...+.
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---- 116 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR---- 116 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC-------
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCC----
Confidence 4577889999999999999984 3688999999986544445679999999999999999999999875332
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
...++||||+++|+|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 117 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~ 192 (326)
T 2w1i_A 117 -RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLT 192 (326)
T ss_dssp --CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred -CceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcch
Confidence 237999999999999999986555799999999999999999999998 9999999999999999999999999999
Q ss_pred hhhhccCC-----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccc---cc
Q 004195 635 LLAEARGK-----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTD---EA 706 (769)
Q Consensus 635 ~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~---~~ 706 (769)
+....... .....+..|++||...+..++.++|||||||++|||+||+.|+.......... ........ ..
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 271 (326)
T 2w1i_A 193 KVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRM-IGNDKQGQMIVFH 271 (326)
T ss_dssp EECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHH-HCTTCCTHHHHHH
T ss_pred hhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHh-hccccchhhhHHH
Confidence 76543221 11122234788998888889999999999999999999998876432211110 00000000 00
Q ss_pred ccccc----CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 707 RKSIV----DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 707 ~~~~~----d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
..+.+ .+.....++ .++.+++.+||+.||++|||+.|+++.+....
T Consensus 272 ~~~~~~~~~~~~~~~~~~----~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~ 321 (326)
T 2w1i_A 272 LIELLKNNGRLPRPDGCP----DEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321 (326)
T ss_dssp HHHHHHTTCCCCCCTTCC----HHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHhhcCCCCCCCCccc----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 00001 111122333 44889999999999999999999999988664
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=336.14 Aligned_cols=262 Identities=13% Similarity=0.123 Sum_probs=204.5
Q ss_pred hcCCCCcCccccCCceeEEEEEe-CCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKL-TDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
.++|...+.||+|+||.||+|+. .+|+.||||++.... ..+.+.+|++++++++|++++..++++... ...
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~------~~~ 79 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAE------GDY 79 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEE------TTE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCC------CCc
Confidence 46788999999999999999996 479999999987543 335689999999999998888777776542 234
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceee---CCCceeeecCCCCc
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLL---DENFHVKINSYNLP 634 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl---d~~~~~kl~DFGla 634 (769)
.++||||+ +++|.+++......+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++
T Consensus 80 ~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 155 (296)
T 3uzp_A 80 NVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155 (296)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTC
T ss_pred eEEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCc
Confidence 79999999 8999999984445799999999999999999999999 99999999999999 48899999999999
Q ss_pred hhhhccCC---------cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchh----HHHHhhhhhcc
Q 004195 635 LLAEARGK---------GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVV----VLVKDLLQVNI 701 (769)
Q Consensus 635 ~~~~~~~~---------~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~----~~~~~~~~~~~ 701 (769)
+....... ....++..|++||...+..++.++|||||||++|||+||+.||..... .....+.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 235 (296)
T 3uzp_A 156 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM 235 (296)
T ss_dssp EECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhccccc
Confidence 76543221 223455678889999888899999999999999999999999975321 11111111100
Q ss_pred ccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhccccc
Q 004195 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQGLKE 763 (769)
Q Consensus 702 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~~~~ 763 (769)
.. ..+.+...+++ .+.+++.+||+.||++|||++++++.+.......+...
T Consensus 236 ~~-------~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~~ 286 (296)
T 3uzp_A 236 ST-------PIEVLCKGYPS----EFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSY 286 (296)
T ss_dssp HS-------CHHHHTTTSCH----HHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCCS
T ss_pred CC-------chHHHHhhCCH----HHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCcc
Confidence 00 00111123343 38899999999999999999999999987765554443
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-38 Score=341.19 Aligned_cols=268 Identities=20% Similarity=0.303 Sum_probs=201.1
Q ss_pred HHHhcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhc--cCCceeeEeeeeeccCCCCC
Q 004195 476 KEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKL--RHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 476 ~~~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l--~H~nIv~l~~~~~~~~~~~~ 553 (769)
....++|+..+.||+|+||.||+|+.. |+.||||++... ....+.+|.+++... +||||+++++++.+...
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~--- 105 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTG--- 105 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG---
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCC---
Confidence 344568999999999999999999986 899999998643 234556666666655 89999999999876422
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCC-----CCCccccCccccceeeCCCceeee
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGI-----VPGVFSNNLKITDVLLDENFHVKI 628 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivHrDlKp~NILld~~~~~kl 628 (769)
.....++||||+++|+|.++++.. .+++..+..++.|++.||+|||+.+ .++|+||||||+||+++.++.+||
T Consensus 106 ~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl 183 (337)
T 3mdy_A 106 SWTQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCI 183 (337)
T ss_dssp GGCEEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEE
T ss_pred CCCceEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEE
Confidence 124589999999999999999754 5899999999999999999999852 448999999999999999999999
Q ss_pred cCCCCchhhhccCC------cceeecCCCcchhhhccCCCCCC------CCeeehhHHHHHHHhC----------CCCCC
Q 004195 629 NSYNLPLLAEARGK------GSAEVSSPAKKTSVLARTEQDDK------SDVYDIGIILIEIIVG----------RPITS 686 (769)
Q Consensus 629 ~DFGla~~~~~~~~------~~~~~~~~~~~pe~~~~~~~~~k------sDVwS~Gvil~elltG----------~~p~~ 686 (769)
+|||+++....... ....++..|++||.+.+..++.+ +|||||||++|||+|| +.||.
T Consensus 184 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~ 263 (337)
T 3mdy_A 184 ADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYH 263 (337)
T ss_dssp CCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred EeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHh
Confidence 99999965432221 12234566788998877766665 9999999999999999 55553
Q ss_pred Cch-----hHHHHhhhhhccccccccccccCccccCC-CCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcc
Q 004195 687 ENV-----VVLVKDLLQVNIGTDEARKSIVDPAVMNE-CSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQG 760 (769)
Q Consensus 687 ~~~-----~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~ 760 (769)
... .......... ....+..... ...+...++.+++.+||+.||++|||+.|+++++....+.++
T Consensus 264 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 334 (337)
T 3mdy_A 264 DLVPSDPSYEDMREIVCI---------KKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD 334 (337)
T ss_dssp TTSCSSCCHHHHHHHHTT---------SCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred hhcCCCCchhhhHHHHhh---------hccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcc
Confidence 211 0111111000 0011111111 123567779999999999999999999999999998776554
Q ss_pred c
Q 004195 761 L 761 (769)
Q Consensus 761 ~ 761 (769)
.
T Consensus 335 ~ 335 (337)
T 3mdy_A 335 I 335 (337)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-38 Score=349.12 Aligned_cols=268 Identities=15% Similarity=0.186 Sum_probs=206.8
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC-CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK-KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|...+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.. ...
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-----~~~ 83 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETT-----TRH 83 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTT-----TCC
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCC-----CCe
Confidence 46788899999999999999976 59999999997543 234567889999999999999999999987643 224
Q ss_pred EEEEEeccCCCchhhhhcCCC--CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceee----CCCceeeecCC
Q 004195 558 IYLIFEYAPNETLRSFISGPG--YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLL----DENFHVKINSY 631 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl----d~~~~~kl~DF 631 (769)
.++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+||
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DF 160 (396)
T 4eut_A 84 KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160 (396)
T ss_dssp EEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCG
T ss_pred eEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecC
Confidence 799999999999999998532 2389999999999999999999999 99999999999999 88889999999
Q ss_pred CCchhhhccC-CcceeecCCCcchhhhcc--------CCCCCCCCeeehhHHHHHHHhCCCCCCCch-----hHHHHhhh
Q 004195 632 NLPLLAEARG-KGSAEVSSPAKKTSVLAR--------TEQDDKSDVYDIGIILIEIIVGRPITSENV-----VVLVKDLL 697 (769)
Q Consensus 632 Gla~~~~~~~-~~~~~~~~~~~~pe~~~~--------~~~~~ksDVwS~Gvil~elltG~~p~~~~~-----~~~~~~~~ 697 (769)
|+++...... .....++..|++||.+.+ ..++.++|||||||++|||+||+.||.... ........
T Consensus 161 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~ 240 (396)
T 4eut_A 161 GAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII 240 (396)
T ss_dssp GGCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHH
T ss_pred CCceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHh
Confidence 9997654332 222334567788987754 467889999999999999999999986321 12222221
Q ss_pred hhccccccccccc---------c--CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 698 QVNIGTDEARKSI---------V--DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 698 ~~~~~~~~~~~~~---------~--d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
... ....+..+ . +.......+......+.+++.+||+.||++||+++|+++++..+-+
T Consensus 241 ~~~--p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~ 309 (396)
T 4eut_A 241 TGK--PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (396)
T ss_dssp HSC--CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred cCC--CcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence 110 00000000 0 0111223457778889999999999999999999999999876543
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=369.62 Aligned_cols=244 Identities=17% Similarity=0.224 Sum_probs=195.8
Q ss_pred CccccCCceeEEEEEeC---CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEE
Q 004195 486 SFMCDASHGQIYKGKLT---DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYL 560 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~---~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~l 560 (769)
+.||+|+||.||+|.+. +++.||||+++..... ..+++.+|++++++++|||||+++++|.+. ..++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--------~~~l 446 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE--------SWML 446 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESS--------SEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC--------CEEE
Confidence 57999999999999653 4678999999865332 246799999999999999999999999642 2789
Q ss_pred EEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhcc
Q 004195 561 IFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEAR 640 (769)
Q Consensus 561 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~ 640 (769)
|||||++|+|.+++.... .+++..+..|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 447 v~E~~~~g~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~ 522 (635)
T 4fl3_A 447 VMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 522 (635)
T ss_dssp EEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-
T ss_pred EEEccCCCCHHHHHhhCC-CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccC
Confidence 999999999999997543 689999999999999999999999 9999999999999999999999999999765433
Q ss_pred CC-----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCcc
Q 004195 641 GK-----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 641 ~~-----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
.. ....++..|++||.+....++.++|||||||++|||+| |+.||.......+...+.... .+.
T Consensus 523 ~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~----------~~~ 592 (635)
T 4fl3_A 523 ENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE----------RMG 592 (635)
T ss_dssp ------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC----------CCC
T ss_pred ccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC----------CCC
Confidence 21 11122345788999988899999999999999999999 999998765443333222111 111
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
....+++ ++.+++.+||+.||++||++++|++.+...
T Consensus 593 ~p~~~~~----~l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 629 (635)
T 4fl3_A 593 CPAGCPR----EMYDLMNLCWTYDVENRPGFAAVELRLRNY 629 (635)
T ss_dssp CCTTCCH----HHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred CCCCCCH----HHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 1223343 489999999999999999999999988743
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-39 Score=341.25 Aligned_cols=255 Identities=20% Similarity=0.250 Sum_probs=196.6
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC--------CChhHHHHHHHHHhhccCCceeeEeeeeeccC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK--------SSPHMYTYHIELISKLRHSNLVSALGHCLDFS 549 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~--------~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~ 549 (769)
.++|...+.||+|+||.||+|+.. +++.||||++..... .....+.+|++++++++||||+++++++....
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 457889999999999999999976 689999999975421 12245889999999999999999999986422
Q ss_pred CCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCce---e
Q 004195 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH---V 626 (769)
Q Consensus 550 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~---~ 626 (769)
.++||||+++|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++. +
T Consensus 89 --------~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~ 156 (322)
T 2ycf_A 89 --------YYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLI 156 (322)
T ss_dssp --------EEEEEECCTTEETHHHHSTTC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCE
T ss_pred --------eEEEEecCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeE
Confidence 799999999999999997554 689999999999999999999999 9999999999999987654 9
Q ss_pred eecCCCCchhhhccCC-cceeecCCCcchhhhc---cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhcc
Q 004195 627 KINSYNLPLLAEARGK-GSAEVSSPAKKTSVLA---RTEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNI 701 (769)
Q Consensus 627 kl~DFGla~~~~~~~~-~~~~~~~~~~~pe~~~---~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~ 701 (769)
||+|||+++....... ....++..|.+||.+. ...++.++|||||||++|||+||++||...... .....+....
T Consensus 157 kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 236 (322)
T 2ycf_A 157 KITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGK 236 (322)
T ss_dssp EECCCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTC
T ss_pred EEccCccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCc
Confidence 9999999865432211 1223456778898863 467899999999999999999999999753321 1111111100
Q ss_pred ccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 702 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
. ...+.....+++ .+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 237 ~-------~~~~~~~~~~~~----~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~ 280 (322)
T 2ycf_A 237 Y-------NFIPEVWAEVSE----KALDLVKKLLVVDPKARFTTEEALRHPWLQD 280 (322)
T ss_dssp C-------CCCHHHHTTSCH----HHHHHHHHHSCSSTTTSCCHHHHHTSGGGCC
T ss_pred c-------ccCchhhhhcCH----HHHHHHHHHcccCHhhCCCHHHHhhCcCcCC
Confidence 0 001111122333 4889999999999999999999999999854
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-39 Score=347.18 Aligned_cols=262 Identities=11% Similarity=0.082 Sum_probs=193.8
Q ss_pred cCCCCcCccccCCceeEEEEEeC----CCcEEEEEEccccCCC-----------ChhHHHHHHHHHhhccCCceeeEeee
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT----DGTLVAIRSLKMSKKS-----------SPHMYTYHIELISKLRHSNLVSALGH 544 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~----~g~~vAvK~~~~~~~~-----------~~~~~~~Ei~~l~~l~H~nIv~l~~~ 544 (769)
++|...+.||+|+||.||+|+.. ++..||||++...... ..+.+.+|+.+++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 56888999999999999999975 5789999998754221 12346678888999999999999999
Q ss_pred eeccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc
Q 004195 545 CLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF 624 (769)
Q Consensus 545 ~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~ 624 (769)
+.+... .....++||||+ +++|.+++...+ .+++.++..++.|+++||+|||+. +|+||||||+||+++.++
T Consensus 117 ~~~~~~---~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~ 188 (345)
T 2v62_A 117 GLTEFK---GRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKN 188 (345)
T ss_dssp EEEESS---SCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSS
T ss_pred cccccC---CCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCC
Confidence 976321 234689999999 999999998655 799999999999999999999999 999999999999998887
Q ss_pred --eeeecCCCCchhhhccCC---------cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhH--
Q 004195 625 --HVKINSYNLPLLAEARGK---------GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVV-- 691 (769)
Q Consensus 625 --~~kl~DFGla~~~~~~~~---------~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-- 691 (769)
.+||+|||+++....... ....++..|++||.+.+..++.++|||||||++|||+||+.||......
T Consensus 189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~ 268 (345)
T 2v62_A 189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPV 268 (345)
T ss_dssp TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHH
T ss_pred CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccH
Confidence 999999999965532211 2223456788899998888999999999999999999999999642211
Q ss_pred HHHhhhhhcc-ccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 692 LVKDLLQVNI-GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 692 ~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.......... ........... ...+++ ++.+++.+||+.||++||++++|++.++...
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 327 (345)
T 2v62_A 269 AVQTAKTNLLDELPQSVLKWAP---SGSSCC----EIAQFLVCAHSLAYDEKPNYQALKKILNPHG 327 (345)
T ss_dssp HHHHHHHHHHHTTTHHHHHHSC---TTSCCH----HHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred HHHHHHHhhcccccHHHHhhcc---ccccHH----HHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence 1111110000 00000000000 012333 4899999999999999999999999998643
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-38 Score=336.04 Aligned_cols=260 Identities=17% Similarity=0.292 Sum_probs=194.2
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC----CCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCC
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT----DGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLD 551 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~----~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~ 551 (769)
..++|...+.||+|+||.||+|+.. ++..||||+++...... .+.+.+|+.++++++||||+++++++.+....
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence 4567888899999999999999854 34589999997553322 35688999999999999999999999864421
Q ss_pred CCCcceEEEEEeccCCCchhhhhc-----CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCcee
Q 004195 552 DPSISIIYLIFEYAPNETLRSFIS-----GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHV 626 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~-----~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ 626 (769)
.....++||||+++|+|.+++. .....+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+
T Consensus 112 --~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~ 186 (313)
T 3brb_A 112 --GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTV 186 (313)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCE
T ss_pred --CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcE
Confidence 1234699999999999999984 2334699999999999999999999998 99999999999999999999
Q ss_pred eecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhcc
Q 004195 627 KINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNI 701 (769)
Q Consensus 627 kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~ 701 (769)
||+|||+++....... ........|.+||...+..++.++|||||||++|||+| |++||...........+...
T Consensus 187 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~- 265 (313)
T 3brb_A 187 CVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHG- 265 (313)
T ss_dssp EECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT-
T ss_pred EEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcC-
Confidence 9999999976533221 11122335778999888899999999999999999999 88888764433222211110
Q ss_pred ccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 702 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
..+.....+++ .+.+++.+||+.||++|||+.++++++....
T Consensus 266 ---------~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~ 307 (313)
T 3brb_A 266 ---------HRLKQPEDCLD----ELYEIMYSCWRTDPLDRPTFSVLRLQLEKLL 307 (313)
T ss_dssp ---------CCCCCBTTCCH----HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---------CCCCCCccccH----HHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 01111223343 4889999999999999999999999998653
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-38 Score=349.76 Aligned_cols=266 Identities=20% Similarity=0.292 Sum_probs=186.1
Q ss_pred CCCC-cCccccCCceeEEEEEeC---CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 481 CFDS-SSFMCDASHGQIYKGKLT---DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 481 ~f~~-~~~iG~G~~g~Vy~~~~~---~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
.|+. .++||+|+||+||+|+.. +++.||||++... ...+.+.+|++++++++|||||++++++.+.. ..
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-----~~ 93 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHA-----DR 93 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSS--SCCHHHHHHHHHHHHCCCTTBCCCCEEEEETT-----TT
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC--CCCHHHHHHHHHHHhcCCCCeeeEeeEEecCC-----CC
Confidence 3554 458999999999999965 5789999999744 23457899999999999999999999996522 23
Q ss_pred eEEEEEeccCCCchhhhhcC--------CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceee----CCCc
Q 004195 557 IIYLIFEYAPNETLRSFISG--------PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLL----DENF 624 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~--------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl----d~~~ 624 (769)
..++||||++ |+|.+++.. ....+++..+..|+.||+.||+|||+. +|+||||||+|||+ +.++
T Consensus 94 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~ 169 (405)
T 3rgf_A 94 KVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERG 169 (405)
T ss_dssp EEEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTT
T ss_pred eEEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCC
Confidence 5899999997 588887751 122589999999999999999999999 99999999999999 7789
Q ss_pred eeeecCCCCchhhhccC-----CcceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchh--------
Q 004195 625 HVKINSYNLPLLAEARG-----KGSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVV-------- 690 (769)
Q Consensus 625 ~~kl~DFGla~~~~~~~-----~~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~-------- 690 (769)
.+||+|||+++...... .....++..|++||.+.+. .++.++|||||||++|||+||++||.....
T Consensus 170 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~ 249 (405)
T 3rgf_A 170 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPY 249 (405)
T ss_dssp CEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCC
T ss_pred cEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccc
Confidence 99999999997654321 1223445668889988764 589999999999999999999999964322
Q ss_pred --HHHHhhhhh-cccccccccccc------------CccccCCCCH---------HHHHHHHHHHHHcCcCCCCCCCCHH
Q 004195 691 --VLVKDLLQV-NIGTDEARKSIV------------DPAVMNECSD---------ESLKRMMELCLRCLSNEPKDRPSVE 746 (769)
Q Consensus 691 --~~~~~~~~~-~~~~~~~~~~~~------------d~~~~~~~~~---------~~~~~l~~li~~cl~~dP~~RPs~~ 746 (769)
+....+... .......+..+. .......+.. .....+.+|+.+||+.||++|||++
T Consensus 250 ~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~ 329 (405)
T 3rgf_A 250 HHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSE 329 (405)
T ss_dssp CHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHH
T ss_pred hHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHH
Confidence 111111111 011111111110 0000000000 0023478999999999999999999
Q ss_pred HHHHHhHhhhh
Q 004195 747 DTLWNLQFATQ 757 (769)
Q Consensus 747 evl~~l~~~~~ 757 (769)
|+++|+||...
T Consensus 330 e~L~hp~f~~~ 340 (405)
T 3rgf_A 330 QAMQDPYFLED 340 (405)
T ss_dssp HHHTSGGGTSS
T ss_pred HHhcChhhccC
Confidence 99999999754
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-39 Score=340.09 Aligned_cols=263 Identities=19% Similarity=0.269 Sum_probs=205.6
Q ss_pred HHHHHHHhcCCCCcCccccCCceeEEEEEe------CCCcEEEEEEccccCCC-ChhHHHHHHHHHhhc-cCCceeeEee
Q 004195 472 LDELKEATDCFDSSSFMCDASHGQIYKGKL------TDGTLVAIRSLKMSKKS-SPHMYTYHIELISKL-RHSNLVSALG 543 (769)
Q Consensus 472 ~~el~~~t~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l-~H~nIv~l~~ 543 (769)
..+..-..++|...+.||+|+||.||+|+. .+++.||||+++..... ..+.+.+|++++.++ +||||+++++
T Consensus 19 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 98 (316)
T 2xir_A 19 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 98 (316)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred ccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEE
Confidence 344444567899999999999999999984 25689999999754321 235688999999999 7999999999
Q ss_pred eeeccCCCCCCcceEEEEEeccCCCchhhhhcCCCC---------------CCCHHHHHHHHHHHHHHhcccccCCCCCc
Q 004195 544 HCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGY---------------KLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608 (769)
Q Consensus 544 ~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~---------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~i 608 (769)
+|.+.+ ...++||||+++|+|.+++..... .+++..+..++.|+++||+|||+. +|
T Consensus 99 ~~~~~~------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i 169 (316)
T 2xir_A 99 ACTKPG------GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KC 169 (316)
T ss_dssp EECCTT------SCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TC
T ss_pred EEecCC------CceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 987532 237999999999999999985432 289999999999999999999999 99
Q ss_pred cccCccccceeeCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCC
Q 004195 609 FSNNLKITDVLLDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRP 683 (769)
Q Consensus 609 vHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~ 683 (769)
+||||||+||+++.++.+||+|||+++....... ....++..|++||.+.+..++.++|||||||++|||+| |+.
T Consensus 170 ~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~ 249 (316)
T 2xir_A 170 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 249 (316)
T ss_dssp CCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred ccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999975533221 12233456888999888899999999999999999998 999
Q ss_pred CCCCchh-HHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 684 ITSENVV-VLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 684 p~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
||..... ......+... ..+.....+++ .+.+++.+||+.||++|||+.|+++++....+
T Consensus 250 p~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 310 (316)
T 2xir_A 250 PYPGVKIDEEFCRRLKEG----------TRMRAPDYTTP----EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310 (316)
T ss_dssp SSTTCCCSHHHHHHHHHT----------CCCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCcccchhHHHHHHhccC----------ccCCCCCCCCH----HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 9865432 1111111110 01111122333 48899999999999999999999999987654
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=344.36 Aligned_cols=268 Identities=19% Similarity=0.256 Sum_probs=201.9
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC-ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS-SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
.++|...+.||+|+||.||+|+.. +|+.||||++...... ....+.+|++++++++||||+++++++...... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~--~~~ 87 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFE--NFN 87 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCST--TCC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccC--ccc
Confidence 467888999999999999999976 6999999999743221 235678999999999999999999998754321 134
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++||||++ |+|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 88 ~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 161 (353)
T 2b9h_A 88 EVYIIQELMQ-TDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARI 161 (353)
T ss_dssp CEEEEECCCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEeccC-ccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecccccc
Confidence 5899999997 6999998753 589999999999999999999999 999999999999999999999999999965
Q ss_pred hhccCC------------cceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccc
Q 004195 637 AEARGK------------GSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGT 703 (769)
Q Consensus 637 ~~~~~~------------~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~ 703 (769)
...... ....++..|++||.+.. ..++.++|||||||++|||++|++||...........+....+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 241 (353)
T 2b9h_A 162 IDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGT 241 (353)
T ss_dssp CC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred cccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCC
Confidence 432211 11123455788997654 67899999999999999999999999765433221111111111
Q ss_pred cc---ccc--------ccc-------C---ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 704 DE---ARK--------SIV-------D---PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 704 ~~---~~~--------~~~-------d---~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
.. ... +.. . +.....+ ..++.+++.+||+.||++|||++|+++|+|+....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 313 (353)
T 2b9h_A 242 PHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRV----NPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYH 313 (353)
T ss_dssp CCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTS----CHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred CchhccccccccchhhHHhhcccCCCCcchhhhcccC----CHHHHHHHHHhcCcCcccCCCHHHHhcCccccccC
Confidence 00 000 000 0 0001122 34488999999999999999999999999997543
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-39 Score=344.24 Aligned_cols=264 Identities=19% Similarity=0.285 Sum_probs=199.8
Q ss_pred CCCcCccccCCceeEEEEEeC-----CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 482 FDSSSFMCDASHGQIYKGKLT-----DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~-----~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
|...+.||+|+||+||++.+. +|+.||||+++.... ...+.+.+|++++++++||||+++++++.+.+ .
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~ 107 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAG-----A 107 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-----T
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCC-----C
Confidence 477899999999999988643 588999999975422 22356899999999999999999999998632 2
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
...++||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 108 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 182 (318)
T 3lxp_A 108 ASLQLVMEYVPLGSLRDYLPRH--SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAK 182 (318)
T ss_dssp TEEEEEECCCTTCBHHHHGGGS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCE
T ss_pred ceEEEEEecccCCcHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccc
Confidence 3589999999999999999865 489999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccCC-----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccc--cccccc
Q 004195 636 LAEARGK-----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIG--TDEARK 708 (769)
Q Consensus 636 ~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~--~~~~~~ 708 (769)
....... .....+..|++||.+.+..++.++|||||||++|||+||+.||.......... ...... ......
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~ 261 (318)
T 3lxp_A 183 AVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLEL-IGIAQGQMTVLRLT 261 (318)
T ss_dssp ECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHH-HCSCCHHHHHHHHH
T ss_pred cccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhh-hcccccchhHHHHH
Confidence 6543221 11122334788999888889999999999999999999999987543221110 000000 000001
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
+.++.......+...+..+.+++.+||+.||++|||++|+++.+....
T Consensus 262 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~ 309 (318)
T 3lxp_A 262 ELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVH 309 (318)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 111111111112223345899999999999999999999999988653
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-38 Score=340.12 Aligned_cols=269 Identities=17% Similarity=0.240 Sum_probs=199.9
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
++|...+.||+|+||.||+|+.. +|+.||||++....... .+.+.+|+.++++++||||+++++++.+.... ....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-~~~~ 102 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSL-RNFY 102 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSG-GGCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccc-ccce
Confidence 46788899999999999999975 69999999997543222 35688999999999999999999998764321 0112
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++||||++ |+|.+++.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred eEEEEecccc-CCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 3599999997 699988853 489999999999999999999999 999999999999999999999999999976
Q ss_pred hhccCCcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhcccc-ccccccc---
Q 004195 637 AEARGKGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGT-DEARKSI--- 710 (769)
Q Consensus 637 ~~~~~~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~-~~~~~~~--- 710 (769)
..... ....++..|++||.+.+ ..++.++|||||||++|||+||+.||....... ...+....... .+....+
T Consensus 176 ~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 254 (353)
T 3coi_A 176 ADAEM-TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDK 254 (353)
T ss_dssp ---------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCH
T ss_pred CCCCc-cccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhH
Confidence 54322 22334566788998766 678999999999999999999999997654322 22211110000 0000000
Q ss_pred ------------cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 711 ------------VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 711 ------------~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
..+.+ ....+.....+.+++.+|++.||++|||++|+++|+||....
T Consensus 255 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~ 313 (353)
T 3coi_A 255 AAKSYIQSLPQTPRKDF-TQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR 313 (353)
T ss_dssp HHHHHHHTSCBCSSCCT-TTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred HHHHHHHhCcCCCCccH-HHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhcc
Confidence 00000 111122334589999999999999999999999999997543
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-39 Score=343.79 Aligned_cols=258 Identities=16% Similarity=0.181 Sum_probs=197.9
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
++|...+.||+|+||.||+|+.. +|+.||||++........+.+.+|++++++++||||+++++++..... .....
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---~~~~~ 105 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERG---AKHEA 105 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEET---TEEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccC---CCcee
Confidence 56888999999999999999974 799999999976544445678999999999999999999999874221 23458
Q ss_pred EEEEeccCCCchhhhhcC---CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 559 YLIFEYAPNETLRSFISG---PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
++||||+++|+|.+++.. ....+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 106 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~ 182 (317)
T 2buj_A 106 WLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMN 182 (317)
T ss_dssp EEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCE
T ss_pred EEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcch
Confidence 999999999999999873 345799999999999999999999999 99999999999999999999999999875
Q ss_pred hhhccCC-----------cceeecCCCcchhhhccCC---CCCCCCeeehhHHHHHHHhCCCCCCCchhH--HHHhhhhh
Q 004195 636 LAEARGK-----------GSAEVSSPAKKTSVLARTE---QDDKSDVYDIGIILIEIIVGRPITSENVVV--LVKDLLQV 699 (769)
Q Consensus 636 ~~~~~~~-----------~~~~~~~~~~~pe~~~~~~---~~~ksDVwS~Gvil~elltG~~p~~~~~~~--~~~~~~~~ 699 (769)
....... ....++..|.+||.+.... ++.++|||||||++|||++|+.||...... ........
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~ 262 (317)
T 2buj_A 183 QACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN 262 (317)
T ss_dssp ESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHC
T ss_pred hcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhc
Confidence 4321110 1112245677888875443 689999999999999999999998532110 01110100
Q ss_pred ccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 700 NIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 700 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.........+++ .+.+++.+||+.||++|||+.|++++++....
T Consensus 263 ----------~~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~ 306 (317)
T 2buj_A 263 ----------QLSIPQSPRHSS----ALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306 (317)
T ss_dssp ----------C--CCCCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred ----------cCCCCccccCCH----HHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence 000111122333 48899999999999999999999999986644
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=335.36 Aligned_cols=264 Identities=13% Similarity=0.125 Sum_probs=200.8
Q ss_pred HHhcCCCCcCccccCCceeEEEEEe-CCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 477 EATDCFDSSSFMCDASHGQIYKGKL-TDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 477 ~~t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
...++|...+.||+|+||.||+|+. .+++.||||++.... ..+.+.+|++++++++|++++..++++... .
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~------~ 77 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAE------G 77 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEE------T
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCC------C
Confidence 3457899999999999999999996 478999999876443 234688999999999998888887777542 2
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceee---CCCceeeecCCC
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLL---DENFHVKINSYN 632 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl---d~~~~~kl~DFG 632 (769)
...++||||+ +++|.+++......+++..+..++.|+++||+|||+. +|+||||||+||++ ++++.+||+|||
T Consensus 78 ~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg 153 (296)
T 4hgt_A 78 DYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFG 153 (296)
T ss_dssp TEEEEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCT
T ss_pred CceEEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCc
Confidence 3479999999 8999999985455799999999999999999999999 99999999999999 788999999999
Q ss_pred CchhhhccCC---------cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhH----HHHhhhhh
Q 004195 633 LPLLAEARGK---------GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVV----LVKDLLQV 699 (769)
Q Consensus 633 la~~~~~~~~---------~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~----~~~~~~~~ 699 (769)
+++....... ....++..|++||...+..++.++|||||||++|||+||+.||...... ........
T Consensus 154 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 233 (296)
T 4hgt_A 154 LAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEK 233 (296)
T ss_dssp TCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHH
T ss_pred cceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcc
Confidence 9976543221 1233455678899998888999999999999999999999999753211 11111110
Q ss_pred ccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhccccc
Q 004195 700 NIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQGLKE 763 (769)
Q Consensus 700 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~~~~ 763 (769)
.... ..+.....+++ .+.+++.+||+.||++|||++++++.+....+..+...
T Consensus 234 ~~~~-------~~~~~~~~~~~----~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~~ 286 (296)
T 4hgt_A 234 KMST-------PIEVLCKGYPS----EFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSY 286 (296)
T ss_dssp HHHS-------CHHHHTTTSCH----HHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCCT
T ss_pred cccc-------hhhhhhccCCH----HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCCc
Confidence 0000 00111122333 48899999999999999999999999987765554433
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-39 Score=343.52 Aligned_cols=263 Identities=16% Similarity=0.186 Sum_probs=179.9
Q ss_pred HhcCCCCc-CccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHH-HHhhccCCceeeEeeeeeccCCCCCC
Q 004195 478 ATDCFDSS-SFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIE-LISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 478 ~t~~f~~~-~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~-~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
..++|... +.||+|+||.||+|+.. +|+.||||++... ....+|+. .++.++||||+++++++..... .
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~---~ 97 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PKARQEVDHHWQASGGPHIVCILDVYENMHH---G 97 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEET---T
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-----HHHHHHHHHHHHhcCCCChHHHHHHHhhccC---C
Confidence 35678774 46999999999999976 7999999998642 22333433 4566789999999999875322 2
Q ss_pred cceEEEEEeccCCCchhhhhcCCC-CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC---CceeeecC
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPG-YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE---NFHVKINS 630 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---~~~~kl~D 630 (769)
....++||||+++|+|.+++.... ..+++.++..++.|+++||+|||+. +|+||||||+||+++. ++.+||+|
T Consensus 98 ~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~D 174 (336)
T 3fhr_A 98 KRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTD 174 (336)
T ss_dssp EEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECC
T ss_pred CceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEec
Confidence 345899999999999999998543 4699999999999999999999999 9999999999999976 45699999
Q ss_pred CCCchhhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccc
Q 004195 631 YNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSI 710 (769)
Q Consensus 631 FGla~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (769)
||+++...........++..|++||.+....++.++|||||||++|||+||+.||.................. ....
T Consensus 175 fg~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~- 251 (336)
T 3fhr_A 175 FGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRL--GQYG- 251 (336)
T ss_dssp CTTCEEC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------C-
T ss_pred cccceeccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhc--cccc-
Confidence 9999765544444445566788899887788899999999999999999999999754432211100000000 0000
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 711 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
........+++ .+.+++.+||+.||++|||++|+++|+|+....
T Consensus 252 ~~~~~~~~~~~----~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 295 (336)
T 3fhr_A 252 FPNPEWSEVSE----DAKQLIRLLLKTDPTERLTITQFMNHPWINQSM 295 (336)
T ss_dssp CCTTTSTTCCH----HHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTGG
T ss_pred cCchhhccCCH----HHHHHHHHHCCCChhHCcCHHHHhcCccccccc
Confidence 01111122333 488999999999999999999999999997643
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-39 Score=343.21 Aligned_cols=256 Identities=20% Similarity=0.262 Sum_probs=201.5
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CC-----cEEEEEEccccCC-CChhHHHHHHHHHhhc-cCCceeeEeeeeeccCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DG-----TLVAIRSLKMSKK-SSPHMYTYHIELISKL-RHSNLVSALGHCLDFSL 550 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g-----~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~ 550 (769)
.++|...+.||+|+||.||+|+.. ++ ..||+|.+..... ...+.+.+|+++++++ +||||++++++|.+.+.
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 124 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP 124 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCc
Confidence 467888999999999999999964 23 4799999975432 2235688999999999 89999999999976443
Q ss_pred CCCCcceEEEEEeccCCCchhhhhcCC-------------CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccc
Q 004195 551 DDPSISIIYLIFEYAPNETLRSFISGP-------------GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITD 617 (769)
Q Consensus 551 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~N 617 (769)
.++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|
T Consensus 125 -------~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~N 194 (333)
T 2i1m_A 125 -------VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARN 194 (333)
T ss_dssp -------CEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred -------eEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccce
Confidence 79999999999999998631 23579999999999999999999999 99999999999
Q ss_pred eeeCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhH-
Q 004195 618 VLLDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVV- 691 (769)
Q Consensus 618 ILld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~- 691 (769)
|+++.++.+||+|||+++....... ....++..|++||.+.+..++.++|||||||++|||+| |++||......
T Consensus 195 Il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~ 274 (333)
T 2i1m_A 195 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS 274 (333)
T ss_dssp CEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH
T ss_pred EEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH
Confidence 9999999999999999975543322 12223346888999888899999999999999999999 88898754321
Q ss_pred HHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 692 LVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
.......... .+.....+++ .+.+++.+||+.||++|||+.|++++++...+.
T Consensus 275 ~~~~~~~~~~----------~~~~~~~~~~----~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 327 (333)
T 2i1m_A 275 KFYKLVKDGY----------QMAQPAFAPK----NIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327 (333)
T ss_dssp HHHHHHHHTC----------CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCC----------CCCCCCCCCH----HHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence 1222111110 1111122333 488999999999999999999999999876543
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-38 Score=332.25 Aligned_cols=253 Identities=19% Similarity=0.294 Sum_probs=197.0
Q ss_pred CCCcCccccCCceeEEEEEeC-C---CcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 482 FDSSSFMCDASHGQIYKGKLT-D---GTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~-~---g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
|...+.||+|+||+||+|++. + +..||+|.+..... ...+.+.+|+.++++++||||+++++++.+.+.
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~------ 96 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEG------ 96 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS------
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCC------
Confidence 455689999999999999853 2 33799999975432 223578899999999999999999999975432
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++||||+.+|+|.+++......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 97 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 173 (298)
T 3pls_A 97 LPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARD 173 (298)
T ss_dssp CCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCT
T ss_pred CcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCccc
Confidence 24899999999999999987666899999999999999999999999 999999999999999999999999999965
Q ss_pred hhccC------CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCC-CCCCCchhHHHHhhhhhcccccccccc
Q 004195 637 AEARG------KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGR-PITSENVVVLVKDLLQVNIGTDEARKS 709 (769)
Q Consensus 637 ~~~~~------~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~-~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (769)
..... ......+..|.+||...+..++.++|||||||++|||+||. +|+...........+....
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~-------- 245 (298)
T 3pls_A 174 ILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGR-------- 245 (298)
T ss_dssp TTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTC--------
T ss_pred ccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCC--------
Confidence 43221 11122334577899988888999999999999999999954 5555433322222221110
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 710 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.+.....+++ .+.+++.+||+.||++|||++|+++.+.....
T Consensus 246 --~~~~~~~~~~----~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~ 287 (298)
T 3pls_A 246 --RLPQPEYCPD----SLYQVMQQCWEADPAVRPTFRVLVGEVEQIVS 287 (298)
T ss_dssp --CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --CCCCCccchH----HHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 0111122333 48899999999999999999999999987643
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-38 Score=346.21 Aligned_cols=269 Identities=20% Similarity=0.210 Sum_probs=201.8
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhcc-CC-----ceeeEeeeeeccCC
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLR-HS-----NLVSALGHCLDFSL 550 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-H~-----nIv~l~~~~~~~~~ 550 (769)
..++|...+.||+|+||+||+|+.. +++.||||+++... ...+++.+|+.+++.++ |+ +|+++++++....
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~- 129 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN- 129 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT-
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC-
Confidence 4578999999999999999999976 68899999997431 22356788999998885 55 4999999987643
Q ss_pred CCCCcceEEEEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeC--CCceee
Q 004195 551 DDPSISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD--ENFHVK 627 (769)
Q Consensus 551 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld--~~~~~k 627 (769)
..++||||++ |+|.+++... ...+++..+..++.|++.||+|||++ ..+|+||||||+|||++ .++.+|
T Consensus 130 ------~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~k 201 (382)
T 2vx3_A 130 ------HLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIK 201 (382)
T ss_dssp ------EEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEE
T ss_pred ------ceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEE
Confidence 4899999996 5999998743 24689999999999999999999952 23899999999999994 578899
Q ss_pred ecCCCCchhhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhccccccc
Q 004195 628 INSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIGTDEA 706 (769)
Q Consensus 628 l~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~~~~~ 706 (769)
|+|||+++...... ....++..|++||.+.+..++.++|||||||++|||+||++||...... ....+..........
T Consensus 202 L~DFG~a~~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~ 280 (382)
T 2vx3_A 202 IVDFGSSCQLGQRI-YQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAH 280 (382)
T ss_dssp ECCCTTCEETTCCC-CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHH
T ss_pred EEeccCceeccccc-ccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 99999997654332 2334456688999998889999999999999999999999999865432 222222110000000
Q ss_pred -----------cccccC----------------ccc---------------------cCCCCHHHHHHHHHHHHHcCcCC
Q 004195 707 -----------RKSIVD----------------PAV---------------------MNECSDESLKRMMELCLRCLSNE 738 (769)
Q Consensus 707 -----------~~~~~d----------------~~~---------------------~~~~~~~~~~~l~~li~~cl~~d 738 (769)
+..+.+ +.. .......+...+.+|+.+||+.|
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~d 360 (382)
T 2vx3_A 281 ILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYD 360 (382)
T ss_dssp HHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSC
T ss_pred HHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCC
Confidence 000000 000 00112334567899999999999
Q ss_pred CCCCCCHHHHHHHhHhhhh
Q 004195 739 PKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 739 P~~RPs~~evl~~l~~~~~ 757 (769)
|++|||++|+++|+||...
T Consensus 361 P~~Rpta~e~L~hp~f~~~ 379 (382)
T 2vx3_A 361 PKTRIQPYYALQHSFFKKT 379 (382)
T ss_dssp TTTSCCHHHHTTSGGGCC-
T ss_pred hhhCCCHHHHhcCcccccC
Confidence 9999999999999999754
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-38 Score=333.88 Aligned_cols=254 Identities=21% Similarity=0.323 Sum_probs=196.9
Q ss_pred cCCCCcCccccCCceeEEEEEeCC----CcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTD----GTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~----g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
..|...+.||+|+||.||+|+..+ +..||+|.+..... ...+.+.+|+.++++++||||++++++|.+.+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----- 99 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE----- 99 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSS-----
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCC-----
Confidence 347778999999999999999642 23689999875332 22357889999999999999999999976532
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
+..++||||+++|+|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 100 -~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a 175 (298)
T 3f66_A 100 -GSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLA 175 (298)
T ss_dssp -SCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGG
T ss_pred -CceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccccc
Confidence 236899999999999999987666789999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhccCC------cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhcccccccc
Q 004195 635 LLAEARGK------GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEAR 707 (769)
Q Consensus 635 ~~~~~~~~------~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (769)
+....... ....++..|++||...+..++.++||||||+++|||+| |.+|+................
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~------ 249 (298)
T 3f66_A 176 RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR------ 249 (298)
T ss_dssp CCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTC------
T ss_pred ccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCC------
Confidence 65432221 11122335788999888899999999999999999999 556665433222211111100
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 708 KSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 708 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.+.....+++ .+.+++.+||+.||++|||+.|+++.+....
T Consensus 250 ----~~~~~~~~~~----~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 290 (298)
T 3f66_A 250 ----RLLQPEYCPD----PLYEVMLKCWHPKAEMRPSFSELVSRISAIF 290 (298)
T ss_dssp ----CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----CCCCCccCCH----HHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 0111122333 4889999999999999999999999998654
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-38 Score=332.78 Aligned_cols=250 Identities=17% Similarity=0.224 Sum_probs=196.8
Q ss_pred cCCCCcC-ccccCCceeEEEEEeC---CCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 480 DCFDSSS-FMCDASHGQIYKGKLT---DGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 480 ~~f~~~~-~iG~G~~g~Vy~~~~~---~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
++|...+ .||+|+||.||+|.+. +++.||||+++...... .+.+.+|++++++++||||+++++++.. .
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~---- 90 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-E---- 90 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-S----
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECC-C----
Confidence 4566666 9999999999999642 47899999997653322 4678999999999999999999999843 2
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
..++||||+++++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 91 ---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~ 163 (291)
T 1xbb_A 91 ---SWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGL 163 (291)
T ss_dssp ---SEEEEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTT
T ss_pred ---CcEEEEEeCCCCCHHHHHHhCc-CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCc
Confidence 2799999999999999998543 689999999999999999999999 999999999999999999999999999
Q ss_pred chhhhccCCc-----ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhcccccccc
Q 004195 634 PLLAEARGKG-----SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEAR 707 (769)
Q Consensus 634 a~~~~~~~~~-----~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (769)
++........ ...++..|++||......++.++||||||+++|||+| |+.||...........+...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~------- 236 (291)
T 1xbb_A 164 SKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG------- 236 (291)
T ss_dssp CEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-------
T ss_pred ceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-------
Confidence 8655332211 1112245788998888888999999999999999999 99999765543333322211
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 708 KSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 708 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
..+.....+++ .+.+++.+||+.||++||++.|+++.+...
T Consensus 237 ---~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 277 (291)
T 1xbb_A 237 ---ERMGCPAGCPR----EMYDLMNLCWTYDVENRPGFAAVELRLRNY 277 (291)
T ss_dssp ---CCCCCCTTCCH----HHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred ---CCCCCCCCCCH----HHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 01112223343 488999999999999999999999988754
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-38 Score=340.19 Aligned_cols=260 Identities=13% Similarity=0.187 Sum_probs=189.8
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhcc-CCceeeEeeeeeccCCC-CCCcc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLR-HSNLVSALGHCLDFSLD-DPSIS 556 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~-~~~~~ 556 (769)
.+|...+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.+++++. ||||+++++++...... .....
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~ 107 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQA 107 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSE
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCc
Confidence 46888999999999999999975 79999999986554444567899999999996 99999999998643221 12345
Q ss_pred eEEEEEeccCCCchhhhhcC--CCCCCCHHHHHHHHHHHHHHhcccccCCCCC--ccccCccccceeeCCCceeeecCCC
Q 004195 557 IIYLIFEYAPNETLRSFISG--PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPG--VFSNNLKITDVLLDENFHVKINSYN 632 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDlKp~NILld~~~~~kl~DFG 632 (769)
..++||||+. |+|.+++.. ....+++..+..++.|++.||+|||+. + |+||||||+|||++.++.+||+|||
T Consensus 108 ~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg 183 (337)
T 3ll6_A 108 EFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCDFG 183 (337)
T ss_dssp EEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCCCT
T ss_pred eEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEecCc
Confidence 6899999996 799998862 334699999999999999999999998 7 9999999999999999999999999
Q ss_pred CchhhhccCC--------------cceeecCCCcchhhh---ccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHh
Q 004195 633 LPLLAEARGK--------------GSAEVSSPAKKTSVL---ARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKD 695 (769)
Q Consensus 633 la~~~~~~~~--------------~~~~~~~~~~~pe~~---~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~ 695 (769)
+++....... ....++..|++||.+ ....++.++|||||||++|||+||+.||........
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~-- 261 (337)
T 3ll6_A 184 SATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRI-- 261 (337)
T ss_dssp TCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----------
T ss_pred cceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHh--
Confidence 9976533211 022244567788877 466789999999999999999999999975432111
Q ss_pred hhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcc
Q 004195 696 LLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQG 760 (769)
Q Consensus 696 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~ 760 (769)
..... ........++ .+.+++.+||+.||++|||+.|++++++.......
T Consensus 262 -~~~~~----------~~~~~~~~~~----~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~ 311 (337)
T 3ll6_A 262 -VNGKY----------SIPPHDTQYT----VFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARN 311 (337)
T ss_dssp -----C----------CCCTTCCSSG----GGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred -hcCcc----------cCCcccccch----HHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccC
Confidence 11000 0000111222 27889999999999999999999999998765443
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-39 Score=346.30 Aligned_cols=262 Identities=13% Similarity=0.145 Sum_probs=200.4
Q ss_pred cCCCCcCccccCCceeEEEEEeCC---------CcEEEEEEccccCCCChhHHHHHHHHHhhccCCceee----------
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTD---------GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVS---------- 540 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~---------g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~---------- 540 (769)
++|...+.||+|+||.||+|+... ++.||||.+... +.+.+|++++++++|||||+
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 578889999999999999999763 789999998743 46889999999999999998
Q ss_pred -----EeeeeeccCCCCCCcceEEEEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCcc
Q 004195 541 -----ALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLK 614 (769)
Q Consensus 541 -----l~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlK 614 (769)
+++++... ....++||||+ +++|.+++... ...+++..+..++.|+++||+|||+. +|+|||||
T Consensus 117 ~~i~~~~~~~~~~------~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dik 186 (352)
T 2jii_A 117 LAIPTCMGFGVHQ------DKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVT 186 (352)
T ss_dssp CSCCCCCEEEEET------TTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCC
T ss_pred cCccchhhccccC------CcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCC
Confidence 55555531 23589999999 99999999843 34799999999999999999999999 99999999
Q ss_pred ccceeeCCCc--eeeecCCCCchhhhccCC---------cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCC
Q 004195 615 ITDVLLDENF--HVKINSYNLPLLAEARGK---------GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRP 683 (769)
Q Consensus 615 p~NILld~~~--~~kl~DFGla~~~~~~~~---------~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~ 683 (769)
|+||+++.++ .+||+|||+++....... ....++..|++||.+.+..++.++|||||||++|||+||+.
T Consensus 187 p~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~ 266 (352)
T 2jii_A 187 AENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFL 266 (352)
T ss_dssp GGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCC
Confidence 9999999998 899999999965543221 12244567788999888889999999999999999999999
Q ss_pred CCCCch--hHHHHhhhhhccccccccccccCccc-cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcc
Q 004195 684 ITSENV--VVLVKDLLQVNIGTDEARKSIVDPAV-MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQG 760 (769)
Q Consensus 684 p~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~ 760 (769)
||.... ............ .....+.++.. ...+++ ++.+++.+||+.||++|||++|+++.+....+..+
T Consensus 267 pf~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 339 (352)
T 2jii_A 267 PWTNCLPNTEDIMKQKQKFV---DKPGPFVGPCGHWIRPSE----TLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR 339 (352)
T ss_dssp TTGGGTTCHHHHHHHHHHHH---HSCCCEECTTSCEECCCH----HHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred CcccCCcCHHHHHHHHHhcc---CChhhhhhhccccCCCcH----HHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence 997542 111211111100 01111111110 012233 48899999999999999999999999987765554
Q ss_pred ccc
Q 004195 761 LKE 763 (769)
Q Consensus 761 ~~~ 763 (769)
...
T Consensus 340 ~~~ 342 (352)
T 2jii_A 340 VSP 342 (352)
T ss_dssp CCT
T ss_pred CCc
Confidence 443
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-38 Score=329.90 Aligned_cols=258 Identities=18% Similarity=0.218 Sum_probs=203.8
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC--CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK--KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
..++|...+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+..
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 94 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSS----- 94 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCC-----
Confidence 3457899999999999999999976 79999999997543 334578999999999999999999999997643
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC---ceeeecCC
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN---FHVKINSY 631 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~---~~~kl~DF 631 (769)
..++||||+++++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.+ +.+||+||
T Consensus 95 --~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Df 168 (287)
T 2wei_A 95 --SFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDF 168 (287)
T ss_dssp --EEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECST
T ss_pred --eEEEEEEccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEecc
Confidence 4899999999999999887443 689999999999999999999999 99999999999999754 47999999
Q ss_pred CCchhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccc
Q 004195 632 NLPLLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSI 710 (769)
Q Consensus 632 Gla~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (769)
|++........ ....++..|.+||... ..++.++||||||+++|||++|++||...........+......
T Consensus 169 g~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~------- 240 (287)
T 2wei_A 169 GLSTCFQQNTKMKDRIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYA------- 240 (287)
T ss_dssp TGGGTBCCCSSCSCHHHHHTTCCHHHHT-TCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC-------
T ss_pred CcceeecCCCccccccCcccccChHHhc-CCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC-------
Confidence 99876543322 2223445677888775 45899999999999999999999999765443322222111000
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 711 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
.+......+++ ++.+++.+||+.||++|||+.|+++|+|+.+..
T Consensus 241 ~~~~~~~~~~~----~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~~ 284 (287)
T 2wei_A 241 FDLPQWRTISD----DAKDLIRKMLTFHPSLRITATQCLEHPWIQKYS 284 (287)
T ss_dssp CCSGGGTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHHC
T ss_pred CCchhhhhcCH----HHHHHHHHHcccChhhCcCHHHHhcCHHHhccc
Confidence 01111122333 488999999999999999999999999997643
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-38 Score=332.17 Aligned_cols=259 Identities=15% Similarity=0.215 Sum_probs=193.3
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC---hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS---PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~---~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|...+.||+|+||.||+|+.. +|+.||||+++...... .+.+.+|++++++++||||+++++++.+.+
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~------ 105 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN------ 105 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT------
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC------
Confidence 46888999999999999999964 79999999997643322 356889999999999999999999998643
Q ss_pred ceEEEEEeccCCCchhhhhcC---CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCC
Q 004195 556 SIIYLIFEYAPNETLRSFISG---PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYN 632 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFG 632 (769)
..++||||+++|+|.+++.. ....+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 106 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg 181 (310)
T 2wqm_A 106 -ELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLG 181 (310)
T ss_dssp -EEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC-
T ss_pred -cEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEecc
Confidence 38999999999999999862 334689999999999999999999999 99999999999999999999999999
Q ss_pred CchhhhccCC--cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccc
Q 004195 633 LPLLAEARGK--GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSI 710 (769)
Q Consensus 633 la~~~~~~~~--~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (769)
++........ ....++..|.+||......++.++|||||||++|||++|+.||......... .... .... .
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~-~~~~-~~~~-~---- 254 (310)
T 2wqm_A 182 LGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYS-LCKK-IEQC-D---- 254 (310)
T ss_dssp -----------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHH-HHHH-HHTT-C----
T ss_pred ceeeecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHH-HHHH-hhcc-c----
Confidence 9876543221 1223455678899988888999999999999999999999998654321111 0000 0000 0
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 711 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
..+.....+++ ++.+++.+||+.||++|||+.++++++.......
T Consensus 255 ~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~ 299 (310)
T 2wqm_A 255 YPPLPSDHYSE----ELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACT 299 (310)
T ss_dssp SCCCCTTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCCcccccCH----HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhh
Confidence 00111122333 4889999999999999999999999998765443
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-38 Score=341.17 Aligned_cols=268 Identities=18% Similarity=0.252 Sum_probs=202.9
Q ss_pred HHHhcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhh--ccCCceeeEeeeeeccCCCCC
Q 004195 476 KEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISK--LRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 476 ~~~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~--l~H~nIv~l~~~~~~~~~~~~ 553 (769)
....++|...+.||+|+||.||+|+. +|+.||||++... ..+.+.+|++++.. ++||||+++++++.+...
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~--- 110 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNG--- 110 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCS---
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCC---
Confidence 34456899999999999999999998 4899999999643 34678889999887 789999999999976432
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccc--------cCCCCCccccCccccceeeCCCce
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLH--------TGIVPGVFSNNLKITDVLLDENFH 625 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivHrDlKp~NILld~~~~ 625 (769)
.....++||||+++|+|.+++.+. .+++..+..++.|++.||+||| +. +|+||||||+||+++.++.
T Consensus 111 ~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~~ 185 (342)
T 1b6c_B 111 TWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGT 185 (342)
T ss_dssp SCCCEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTSC
T ss_pred ccceeEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCCC
Confidence 122489999999999999999754 5899999999999999999999 66 9999999999999999999
Q ss_pred eeecCCCCchhhhccCC------cceeecCCCcchhhhccCC------CCCCCCeeehhHHHHHHHhC----------CC
Q 004195 626 VKINSYNLPLLAEARGK------GSAEVSSPAKKTSVLARTE------QDDKSDVYDIGIILIEIIVG----------RP 683 (769)
Q Consensus 626 ~kl~DFGla~~~~~~~~------~~~~~~~~~~~pe~~~~~~------~~~ksDVwS~Gvil~elltG----------~~ 683 (769)
+||+|||+++....... ....++..|.+||.+.+.. ++.++|||||||++|||+|| +.
T Consensus 186 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~ 265 (342)
T 1b6c_B 186 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL 265 (342)
T ss_dssp EEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccccccc
Confidence 99999999965543221 2223455678899876542 33689999999999999999 56
Q ss_pred CCCCchhH--HHHhhhhhccccccccccccCccccCC-CCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcc
Q 004195 684 ITSENVVV--LVKDLLQVNIGTDEARKSIVDPAVMNE-CSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQG 760 (769)
Q Consensus 684 p~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~ 760 (769)
||...... ....+..... .....+.+... ...+....+.+++.+||+.||++|||+.||++++....+..+
T Consensus 266 p~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~~ 339 (342)
T 1b6c_B 266 PYYDLVPSDPSVEEMRKVVC------EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 339 (342)
T ss_dssp TTTTTSCSSCCHHHHHHHHT------TSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTTC
T ss_pred CccccCcCcccHHHHHHHHH------HHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHhc
Confidence 66432110 0011111000 00111221111 123556779999999999999999999999999998766554
Q ss_pred c
Q 004195 761 L 761 (769)
Q Consensus 761 ~ 761 (769)
.
T Consensus 340 ~ 340 (342)
T 1b6c_B 340 I 340 (342)
T ss_dssp -
T ss_pred C
Confidence 4
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-39 Score=339.86 Aligned_cols=253 Identities=18% Similarity=0.267 Sum_probs=196.0
Q ss_pred HHHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC------ChhHHHHHHHHHhhc----cCCceeeEee
Q 004195 475 LKEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS------SPHMYTYHIELISKL----RHSNLVSALG 543 (769)
Q Consensus 475 l~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~------~~~~~~~Ei~~l~~l----~H~nIv~l~~ 543 (769)
.....++|...+.||+|+||.||+|+.. +|+.||||+++..... ....+.+|+.++.++ +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 3445678999999999999999999965 7899999999754321 234566799999998 8999999999
Q ss_pred eeeccCCCCCCcceEEEEEec-cCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeC-
Q 004195 544 HCLDFSLDDPSISIIYLIFEY-APNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD- 621 (769)
Q Consensus 544 ~~~~~~~~~~~~~~~~lV~Ey-~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld- 621 (769)
++.+.+. .++|||| +++++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++
T Consensus 106 ~~~~~~~-------~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~ 174 (312)
T 2iwi_A 106 WFETQEG-------FMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDL 174 (312)
T ss_dssp EC------------CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEET
T ss_pred EEecCCe-------EEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeC
Confidence 9876433 7999999 78999999998543 689999999999999999999999 999999999999999
Q ss_pred CCceeeecCCCCchhhhccCCcceeecCCCcchhhhccCCC-CCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhc
Q 004195 622 ENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQ-DDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVN 700 (769)
Q Consensus 622 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~~~~-~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~ 700 (769)
.++.+||+|||+++...........++..|.+||...+..+ +.++|||||||++|||++|+.||...... ....
T Consensus 175 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~ 249 (312)
T 2iwi_A 175 RRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEI-----LEAE 249 (312)
T ss_dssp TTTEEEECCCSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH-----HHTC
T ss_pred CCCeEEEEEcchhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHH-----hhhc
Confidence 88999999999997665444444445667888998876666 45899999999999999999999754211 1110
Q ss_pred cccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 701 IGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 701 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
..+...+++ .+.+++.+||+.||++|||++|+++|+|+....+
T Consensus 250 ------------~~~~~~~~~----~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~~ 292 (312)
T 2iwi_A 250 ------------LHFPAHVSP----DCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAE 292 (312)
T ss_dssp ------------CCCCTTSCH----HHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC---
T ss_pred ------------cCCcccCCH----HHHHHHHHHccCChhhCcCHHHHhcChhhcCchh
Confidence 011122333 4889999999999999999999999999876543
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-38 Score=338.75 Aligned_cols=267 Identities=18% Similarity=0.250 Sum_probs=203.9
Q ss_pred hcCCCCcCccccCCceeEEEEEe-C-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCc------eeeEeeeeeccCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKL-T-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSN------LVSALGHCLDFSL 550 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~-~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~n------Iv~l~~~~~~~~~ 550 (769)
.++|+..+.||+|+||.||+|.. . +|+.||||+++... ...+.+.+|+++++.++|++ ++++++++.+.+
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~- 90 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG- 90 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT-
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC-
Confidence 35788899999999999999986 3 68899999997432 22467889999999987664 999999997643
Q ss_pred CCCCcceEEEEEeccCCCchhhhhcCCC-CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC-------
Q 004195 551 DDPSISIIYLIFEYAPNETLRSFISGPG-YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE------- 622 (769)
Q Consensus 551 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~------- 622 (769)
..++||||+ +++|.+++...+ ..+++..+..++.|+++||+|||+. +|+||||||+||+++.
T Consensus 91 ------~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~ 160 (339)
T 1z57_A 91 ------HICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAY 160 (339)
T ss_dssp ------EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEE
T ss_pred ------cEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEecccccccc
Confidence 489999999 789999987432 4689999999999999999999999 9999999999999987
Q ss_pred ------------CceeeecCCCCchhhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchh
Q 004195 623 ------------NFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVV 690 (769)
Q Consensus 623 ------------~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~ 690 (769)
++.+||+|||+++...... ....++..|++||.+.+..++.++|||||||++|||+||++||.....
T Consensus 161 ~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 239 (339)
T 1z57_A 161 NPKIKRDERTLINPDIKVVDFGSATYDDEHH-STLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS 239 (339)
T ss_dssp C----CEEEEESCCCEEECCCSSCEETTSCC-CSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCH
T ss_pred CCccccccccccCCCceEeeCcccccCcccc-ccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCh
Confidence 6679999999997654322 233445678889999888999999999999999999999999976543
Q ss_pred HHHHhhhhhcccc-cccc-----------------c----------cccCcc-ccCCCCHHHHHHHHHHHHHcCcCCCCC
Q 004195 691 VLVKDLLQVNIGT-DEAR-----------------K----------SIVDPA-VMNECSDESLKRMMELCLRCLSNEPKD 741 (769)
Q Consensus 691 ~~~~~~~~~~~~~-~~~~-----------------~----------~~~d~~-~~~~~~~~~~~~l~~li~~cl~~dP~~ 741 (769)
......+...... +... . ....+. -..........++.+++.+||+.||++
T Consensus 240 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 319 (339)
T 1z57_A 240 KEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAK 319 (339)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred HHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccc
Confidence 3222211111110 0000 0 000000 001123345677999999999999999
Q ss_pred CCCHHHHHHHhHhhhhh
Q 004195 742 RPSVEDTLWNLQFATQI 758 (769)
Q Consensus 742 RPs~~evl~~l~~~~~~ 758 (769)
|||++|+++|+||....
T Consensus 320 Rpt~~ell~hp~f~~~~ 336 (339)
T 1z57_A 320 RITLREALKHPFFDLLK 336 (339)
T ss_dssp SCCHHHHTTSGGGGGGG
T ss_pred ccCHHHHhcCHHHHHHh
Confidence 99999999999997543
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-38 Score=364.87 Aligned_cols=313 Identities=16% Similarity=0.255 Sum_probs=238.4
Q ss_pred CHHHHHHHHHHHHhcCCCC---------CCCCCCCCCCCCCCCCCCCCCcceEecC-CCeeEEEeCCCCCCCCCCCCCCC
Q 004195 29 QLFQYQTLVRIQQLLNYPS---------VSSSFNTTTVTDFCNIEPTPSLTLVCYE-DNLTQLHIAGDNNNNINGGLAHN 98 (769)
Q Consensus 29 ~~~~~~~ll~~k~~~~~~~---------~l~~w~~~~~~~~c~~~~~~~~~v~C~~-~~v~~l~l~~~~~~~~~~~l~~n 98 (769)
...|+.||.+++.++..+. ...+|+.+. ++|.|. ...||+|+. ++|++|++.++.+.
T Consensus 28 ~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~--~~c~w~--~~~GV~C~~~~~V~~L~L~~~~l~--------- 94 (636)
T 4eco_A 28 YIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNK--ELDMWG--AQPGVSLNSNGRVTGLSLEGFGAS--------- 94 (636)
T ss_dssp HHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSS--CGGGTT--CCTTEEECTTCCEEEEECTTSCCE---------
T ss_pred HHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCC--Cccccc--CCCCeEEcCCCCEEEEEecCcccC---------
Confidence 3568999999999986553 124798766 899991 112599954 68999999876544
Q ss_pred CCCCccccccCCCCCCcEEEeeccc-------------------------------------------------------
Q 004195 99 FSTDTFFSTLGSLSSLKVLSLVSLG------------------------------------------------------- 123 (769)
Q Consensus 99 ~~~~~~~~~~~~l~~L~~L~L~~n~------------------------------------------------------- 123 (769)
+.+|+.+++|++|++|+|++|.
T Consensus 95 ---g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~ 171 (636)
T 4eco_A 95 ---GRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQ 171 (636)
T ss_dssp ---EEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTT
T ss_pred ---CcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCcc
Confidence 4566778888888888887773
Q ss_pred -----------------------ccCCCCccccCCCcCceeeccCcccCCc-----------------CCcccc--CCCc
Q 004195 124 -----------------------LWGPLPGSIAHSSSLEILNLSSNYLSGS-----------------IPVQIS--SLRN 161 (769)
Q Consensus 124 -----------------------l~g~~p~~~~~l~~L~~L~Ls~N~l~g~-----------------~p~~~~--~l~~ 161 (769)
++| +|..|+++++|++|+|++|+|+|. +|..++ ++++
T Consensus 172 ~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~ 250 (636)
T 4eco_A 172 QKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKD 250 (636)
T ss_dssp SCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTT
T ss_pred ccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCC
Confidence 335 677788888888888888888875 788887 8888
Q ss_pred CCEEEcccCcCCccCCccCcCCcCCCEEeccCCC-Ccc-cCCccccCC------CCCCEEEccCccccccCCC---CCCC
Q 004195 162 LQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNS-LSG-FLPVSLTGL------QSLRVVSLSANHLSGEIPD---LRNL 230 (769)
Q Consensus 162 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~l~~l------~~L~~L~ls~N~l~~~~p~---l~~l 230 (769)
|++|+|++|++.+.+|..|+++++|++|+|++|+ ++| .+|..++++ ++|++|++++|+++ .+|. ++++
T Consensus 251 L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l 329 (636)
T 4eco_A 251 LTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKM 329 (636)
T ss_dssp CCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTC
T ss_pred CCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccC
Confidence 8888888888888888888888888888888887 887 778777776 78888888888888 5554 7788
Q ss_pred ccCcEEeccCCcCCCCCccc--ccCCcEEEeCCccccCCcCchhhcCCCc-CcEEeccCccccccCCccCCCCC--CCCE
Q 004195 231 KNLRVFDVQDNYFGPRFPRL--HKKMVTLVLRNNRFQFGLNPDELRSYNQ-LQKLDISLNRFVGPFIPSLLSLP--SITY 305 (769)
Q Consensus 231 ~~L~~l~l~~N~l~~~~p~~--~~~L~~L~l~~N~~~~~i~p~~~~~l~~-L~~L~Ls~N~l~~~~~~~~~~l~--~L~~ 305 (769)
++|+.|++++|.++|.+|.. +++|+.|++++|.++ .+ |..+..+++ |++|++++|.++ .+|..+..++ +|+.
T Consensus 330 ~~L~~L~L~~N~l~g~ip~~~~l~~L~~L~L~~N~l~-~l-p~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~ 406 (636)
T 4eco_A 330 KKLGMLECLYNQLEGKLPAFGSEIKLASLNLAYNQIT-EI-PANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSA 406 (636)
T ss_dssp TTCCEEECCSCCCEEECCCCEEEEEESEEECCSSEEE-EC-CTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEE
T ss_pred CCCCEEeCcCCcCccchhhhCCCCCCCEEECCCCccc-cc-cHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCE
Confidence 88888888888888777732 357778888888887 55 777888887 888888888887 5677666554 7888
Q ss_pred EEccCCcCCccccccCC-------CCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCC
Q 004195 306 LDIHGNKLTGLLLQNMS-------CNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLS 362 (769)
Q Consensus 306 L~l~~N~l~~~~~~~~~-------~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~ 362 (769)
|++++|++++.+|..+. .+++|+.|+|++|+++...+..+..+++++.+++++|.++
T Consensus 407 L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~ 470 (636)
T 4eco_A 407 IDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT 470 (636)
T ss_dssp EECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS
T ss_pred EECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC
Confidence 88888888887777777 6778888888888888444444455777888888888776
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-38 Score=335.44 Aligned_cols=257 Identities=15% Similarity=0.223 Sum_probs=196.3
Q ss_pred HHhcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCC--ChhHHHHHHHHHhhcc--CCceeeEeeeeeccCCCC
Q 004195 477 EATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKS--SPHMYTYHIELISKLR--HSNLVSALGHCLDFSLDD 552 (769)
Q Consensus 477 ~~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~--H~nIv~l~~~~~~~~~~~ 552 (769)
...++|...+.||+|+||.||+|+..+++.||||++...... ..+.+.+|++++++++ ||||+++++++.+..
T Consensus 25 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~--- 101 (313)
T 3cek_A 25 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--- 101 (313)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSS---
T ss_pred eccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCC---
Confidence 345678889999999999999999888999999999754332 2357889999999997 599999999998643
Q ss_pred CCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCC
Q 004195 553 PSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYN 632 (769)
Q Consensus 553 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFG 632 (769)
..++||| +.+++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||++++ +.+||+|||
T Consensus 102 ----~~~lv~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg 171 (313)
T 3cek_A 102 ----YIYMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFG 171 (313)
T ss_dssp ----EEEEEEC-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCS
T ss_pred ----EEEEEEe-cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeecc
Confidence 4899999 55789999998554 689999999999999999999999 9999999999999964 899999999
Q ss_pred CchhhhccCC----cceeecCCCcchhhhcc-----------CCCCCCCCeeehhHHHHHHHhCCCCCCCchhH--HHHh
Q 004195 633 LPLLAEARGK----GSAEVSSPAKKTSVLAR-----------TEQDDKSDVYDIGIILIEIIVGRPITSENVVV--LVKD 695 (769)
Q Consensus 633 la~~~~~~~~----~~~~~~~~~~~pe~~~~-----------~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~--~~~~ 695 (769)
+++....... ....++..|++||.... ..++.++|||||||++|||+||+.||...... ....
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 251 (313)
T 3cek_A 172 IANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA 251 (313)
T ss_dssp SSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHH
T ss_pred ccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHH
Confidence 9976543221 12234556788888754 46888999999999999999999998753221 1111
Q ss_pred hhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcc
Q 004195 696 LLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQG 760 (769)
Q Consensus 696 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~ 760 (769)
.... ..........+ ..+.+++.+||+.||++||+++|+++|+|+......
T Consensus 252 ~~~~----------~~~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~ 302 (313)
T 3cek_A 252 IIDP----------NHEIEFPDIPE----KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHP 302 (313)
T ss_dssp HHCT----------TSCCCCCCCSC----HHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC---
T ss_pred HHhc----------ccccCCcccch----HHHHHHHHHHccCCcccCcCHHHHhcCccccCCCCc
Confidence 1100 00011112223 348899999999999999999999999999865433
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-38 Score=347.75 Aligned_cols=269 Identities=15% Similarity=0.152 Sum_probs=202.6
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhcc--------CCceeeEeeeeeccC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLR--------HSNLVSALGHCLDFS 549 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~--------H~nIv~l~~~~~~~~ 549 (769)
.++|...+.||+|+||+||+|+.. +++.||||+++.. ....+.+.+|++++++++ |+||+++++++....
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 367999999999999999999965 6899999999743 123467889999999996 788999999987422
Q ss_pred CCCCCcceEEEEEeccCCCchhhhhc-CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc----
Q 004195 550 LDDPSISIIYLIFEYAPNETLRSFIS-GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF---- 624 (769)
Q Consensus 550 ~~~~~~~~~~lV~Ey~~~gsL~~~l~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~---- 624 (769)
. .....++||||+. ++|.+.+. .....+++..+..++.||++||+|||+.+ +|+||||||+|||++.++
T Consensus 115 ~---~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~ 188 (397)
T 1wak_A 115 V---NGTHICMVFEVLG-HHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIR 188 (397)
T ss_dssp T---TEEEEEEEECCCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHH
T ss_pred C---CCceEEEEEeccC-ccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhh
Confidence 1 2346899999995 55555554 44457999999999999999999999853 899999999999999776
Q ss_pred ---------------------------------------------eeeecCCCCchhhhccCCcceeecCCCcchhhhcc
Q 004195 625 ---------------------------------------------HVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLAR 659 (769)
Q Consensus 625 ---------------------------------------------~~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~ 659 (769)
.+||+|||+++..... .....++..|++||.+.+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-~~~~~gt~~y~aPE~~~~ 267 (397)
T 1wak_A 189 RLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-FTEDIQTRQYRSLEVLIG 267 (397)
T ss_dssp HHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-SCSCCSCGGGCCHHHHHT
T ss_pred hhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-CccCCCCCcccCChhhcC
Confidence 7999999999765443 223345667889999988
Q ss_pred CCCCCCCCeeehhHHHHHHHhCCCCCCCchh-------HHHHhhhhhcccccc-----------------ccccccCcc-
Q 004195 660 TEQDDKSDVYDIGIILIEIIVGRPITSENVV-------VLVKDLLQVNIGTDE-----------------ARKSIVDPA- 714 (769)
Q Consensus 660 ~~~~~ksDVwS~Gvil~elltG~~p~~~~~~-------~~~~~~~~~~~~~~~-----------------~~~~~~d~~- 714 (769)
..++.++|||||||++|||+||++||..... .....+......... ....+.+..
T Consensus 268 ~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (397)
T 1wak_A 268 SGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKP 347 (397)
T ss_dssp SCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCC
T ss_pred CCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCC
Confidence 8999999999999999999999999864321 111111110000000 000000000
Q ss_pred --------ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 715 --------VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 715 --------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
-....+.+....+.+|+.+||+.||++|||++|+++|+||.
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~ 396 (397)
T 1wak_A 348 WGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN 396 (397)
T ss_dssp CCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGG
T ss_pred cchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCcccc
Confidence 00124566778899999999999999999999999999985
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=340.45 Aligned_cols=250 Identities=17% Similarity=0.250 Sum_probs=202.6
Q ss_pred HHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC------ChhHHHHHHHHHhhcc--CCceeeEeeeeec
Q 004195 477 EATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS------SPHMYTYHIELISKLR--HSNLVSALGHCLD 547 (769)
Q Consensus 477 ~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~------~~~~~~~Ei~~l~~l~--H~nIv~l~~~~~~ 547 (769)
...++|...+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|+.++++++ ||||+++++++.+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 34567889999999999999999965 7899999999765322 2356788999999996 5999999999986
Q ss_pred cCCCCCCcceEEEEEeccCC-CchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeC-CCce
Q 004195 548 FSLDDPSISIIYLIFEYAPN-ETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD-ENFH 625 (769)
Q Consensus 548 ~~~~~~~~~~~~lV~Ey~~~-gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld-~~~~ 625 (769)
.+ ..++||||+.+ ++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++ +++.
T Consensus 120 ~~-------~~~lv~e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~ 188 (320)
T 3a99_A 120 PD-------SFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGE 188 (320)
T ss_dssp SS-------EEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTE
T ss_pred CC-------cEEEEEEcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCC
Confidence 43 48999999976 89999997543 689999999999999999999999 999999999999999 7899
Q ss_pred eeecCCCCchhhhccCCcceeecCCCcchhhhccCCC-CCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccc
Q 004195 626 VKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQ-DDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTD 704 (769)
Q Consensus 626 ~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~~~~-~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~ 704 (769)
+||+|||+++...........++..|++||.+....+ +.++|||||||++|||+||+.||...... ....
T Consensus 189 ~kL~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-----~~~~---- 259 (320)
T 3a99_A 189 LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-----IRGQ---- 259 (320)
T ss_dssp EEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH-----HHCC----
T ss_pred EEEeeCccccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhh-----hccc----
Confidence 9999999997665443333445566888998876665 68899999999999999999999754311 1100
Q ss_pred cccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 705 EARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 705 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
......+++ ++.+++.+||+.||++|||++|+++|+|+....
T Consensus 260 --------~~~~~~~~~----~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~ 301 (320)
T 3a99_A 260 --------VFFRQRVSS----ECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 301 (320)
T ss_dssp --------CCCSSCCCH----HHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred --------ccccccCCH----HHHHHHHHHccCChhhCcCHHHHhcCHhhcCcc
Confidence 001123343 388999999999999999999999999987543
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-38 Score=339.92 Aligned_cols=270 Identities=18% Similarity=0.275 Sum_probs=193.7
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHH--HhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIEL--ISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~--l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|...+.||+|+||.||+|+. +++.||||++... ....+..|.++ +..++||||+++++++.....+ ....
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~--~~~~ 86 (336)
T 3g2f_A 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTAD--GRME 86 (336)
T ss_dssp TSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTT--SCEE
T ss_pred HHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccC--CCce
Confidence 5688899999999999999987 5899999999743 23445555555 4558999999999876543321 2345
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCC------CCCccccCccccceeeCCCceeeecCC
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGI------VPGVFSNNLKITDVLLDENFHVKINSY 631 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------~~~ivHrDlKp~NILld~~~~~kl~DF 631 (769)
.++||||+++|+|.+++.... .++..+.+++.|+++||+|||+.+ .++|+||||||+|||++.++.+||+||
T Consensus 87 ~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DF 164 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDF 164 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCC
T ss_pred EEEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeec
Confidence 799999999999999997553 589999999999999999999863 348999999999999999999999999
Q ss_pred CCchhhhccC----------CcceeecCCCcchhhhcc-------CCCCCCCCeeehhHHHHHHHhCCCCCCCch-hHHH
Q 004195 632 NLPLLAEARG----------KGSAEVSSPAKKTSVLAR-------TEQDDKSDVYDIGIILIEIIVGRPITSENV-VVLV 693 (769)
Q Consensus 632 Gla~~~~~~~----------~~~~~~~~~~~~pe~~~~-------~~~~~ksDVwS~Gvil~elltG~~p~~~~~-~~~~ 693 (769)
|+++...... .....++..|++||.+.+ ..++.++|||||||++|||+||+.|+.... ....
T Consensus 165 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~ 244 (336)
T 3g2f_A 165 GLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEY 244 (336)
T ss_dssp TTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCC
T ss_pred cceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHH
Confidence 9996543221 111234556788998765 356779999999999999999976543221 1000
Q ss_pred Hhhhhhcccccc---cc-----ccccCccccCCC--CHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 694 KDLLQVNIGTDE---AR-----KSIVDPAVMNEC--SDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 694 ~~~~~~~~~~~~---~~-----~~~~d~~~~~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
............ .. .....+.+...+ ....+..+.+++.+||+.||++|||++|+++.+.....
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~ 318 (336)
T 3g2f_A 245 QMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMM 318 (336)
T ss_dssp CCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHH
Confidence 000000000000 00 000111111111 22456679999999999999999999999999987654
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-38 Score=331.76 Aligned_cols=254 Identities=18% Similarity=0.221 Sum_probs=191.6
Q ss_pred cCCCCcCccccCCceeEEEEEeC--CCc--EEEEEEccccCCC---ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT--DGT--LVAIRSLKMSKKS---SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD 552 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~--~g~--~vAvK~~~~~~~~---~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~ 552 (769)
++|+..+.||+|+||+||+|++. +++ .||||+++..... ..+.+.+|++++++++||||+++++++.+..
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--- 94 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP--- 94 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS---
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC---
Confidence 46888899999999999999853 333 6999999754322 2357889999999999999999999987532
Q ss_pred CCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCC
Q 004195 553 PSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYN 632 (769)
Q Consensus 553 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFG 632 (769)
.++||||+++|+|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 95 -----~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg 166 (291)
T 1u46_A 95 -----MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFG 166 (291)
T ss_dssp -----CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCT
T ss_pred -----ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccc
Confidence 5899999999999999985545689999999999999999999999 99999999999999999999999999
Q ss_pred CchhhhccCCc-----ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccc
Q 004195 633 LPLLAEARGKG-----SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEA 706 (769)
Q Consensus 633 la~~~~~~~~~-----~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (769)
+++........ ....+..|++||......++.++||||||+++|||++ |+.||...........+....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~----- 241 (291)
T 1u46_A 167 LMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG----- 241 (291)
T ss_dssp TCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSC-----
T ss_pred ccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccC-----
Confidence 98665332211 1122335788999888888999999999999999999 999997654332222111100
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 707 RKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 707 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
..+.....+++ .+.+++.+||+.||++|||+.++++++..+..
T Consensus 242 ----~~~~~~~~~~~----~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 242 ----ERLPRPEDCPQ----DIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp ----CCCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred ----CCCCCCcCcCH----HHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 01111123333 48899999999999999999999999876543
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-38 Score=340.14 Aligned_cols=244 Identities=11% Similarity=0.080 Sum_probs=192.1
Q ss_pred HhcCCCCcCccccCCceeEEEEE------eCCCcEEEEEEccccCCCChhHHHHHHHHHhhcc---CCceeeEeeeeecc
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGK------LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLR---HSNLVSALGHCLDF 548 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~------~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~---H~nIv~l~~~~~~~ 548 (769)
..++|...+.||+|+||+||+|+ ..+++.||||+++. ....++.+|++++++++ |+||+++++++...
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKP---ANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESS---CCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCC---CChhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 34678889999999999999994 34689999999974 34567888999888886 99999999999864
Q ss_pred CCCCCCcceEEEEEeccCCCchhhhhcC----CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC--
Q 004195 549 SLDDPSISIIYLIFEYAPNETLRSFISG----PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE-- 622 (769)
Q Consensus 549 ~~~~~~~~~~~lV~Ey~~~gsL~~~l~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~-- 622 (769)
+. .++|||||++|+|.+++.. ....++|..++.|+.|+++||+|||+. +|+||||||+|||++.
T Consensus 140 ~~-------~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~ 209 (365)
T 3e7e_A 140 NG-------SVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGF 209 (365)
T ss_dssp SC-------EEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGG
T ss_pred CC-------cEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccc
Confidence 43 8999999999999999972 344799999999999999999999998 9999999999999998
Q ss_pred ---------CceeeecCCCCchhhhccC----CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCch
Q 004195 623 ---------NFHVKINSYNLPLLAEARG----KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENV 689 (769)
Q Consensus 623 ---------~~~~kl~DFGla~~~~~~~----~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~ 689 (769)
++.+||+|||+|+...... .....++..|++||.+.+..++.++|||||||++|||+||+.||....
T Consensus 210 ~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~ 289 (365)
T 3e7e_A 210 LEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNE 289 (365)
T ss_dssp TCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEE
T ss_pred cCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCC
Confidence 8999999999996543221 122345667889999988889999999999999999999999986432
Q ss_pred hHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCC-CHHHHHHHhH
Q 004195 690 VVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRP-SVEDTLWNLQ 753 (769)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~l~ 753 (769)
.... . ....+..... ...+.+++.+|++.+|.+|+ +++++.+.+.
T Consensus 290 ~~~~------------~----~~~~~~~~~~---~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~ 335 (365)
T 3e7e_A 290 GGEC------------K----PEGLFRRLPH---LDMWNEFFHVMLNIPDCHHLPSLDLLRQKLK 335 (365)
T ss_dssp TTEE------------E----ECSCCTTCSS---HHHHHHHHHHHHCCCCTTCCCCHHHHHHHHH
T ss_pred CCce------------e----echhccccCc---HHHHHHHHHHHcCCCCCCcchHHHHHHHHHH
Confidence 2100 0 0011101111 23467788899999999994 6666665554
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-38 Score=334.42 Aligned_cols=261 Identities=15% Similarity=0.196 Sum_probs=181.6
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC-ChhHHHHHHH-HHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS-SPHMYTYHIE-LISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~-~~~~~~~Ei~-~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
++|...+.||+|+||.||+|+.. +|+.||||+++..... ...++.+|+. +++.++||||+++++++.+.+
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~------- 94 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREG------- 94 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSS-------
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCC-------
Confidence 56788899999999999999975 7999999999754221 2235566666 677789999999999998643
Q ss_pred eEEEEEeccCCCchhhhhc----CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCC
Q 004195 557 IIYLIFEYAPNETLRSFIS----GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYN 632 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~----~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFG 632 (769)
..++||||++ |+|.+++. .....+++..+..++.|+++||+|||+. .+|+||||||+||+++.++.+||+|||
T Consensus 95 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Dfg 171 (327)
T 3aln_A 95 DCWICMELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFG 171 (327)
T ss_dssp EEEEEECCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCCS
T ss_pred ceEEEEeecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccCC
Confidence 4899999998 48887775 2234789999999999999999999984 289999999999999999999999999
Q ss_pred CchhhhccCC-cceeecCCCcchhhh----ccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccc
Q 004195 633 LPLLAEARGK-GSAEVSSPAKKTSVL----ARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEAR 707 (769)
Q Consensus 633 la~~~~~~~~-~~~~~~~~~~~pe~~----~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (769)
+++....... ....++..|.+||.+ .+..++.++|||||||++|||+||+.||...... ... ...... ...
T Consensus 172 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~-~~~~~~--~~~ 247 (327)
T 3aln_A 172 ISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV-FDQ-LTQVVK--GDP 247 (327)
T ss_dssp SSCC------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC---------CCCCC--SCC
T ss_pred CceecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH-HHH-HHHHhc--CCC
Confidence 9966543322 222445567888887 4567899999999999999999999999753211 001 000000 000
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 708 KSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 708 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
.. +.......+++ .+.+++.+||+.||++|||+.|+++|+|+....+
T Consensus 248 ~~-~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~~ 294 (327)
T 3aln_A 248 PQ-LSNSEEREFSP----SFINFVNLCLTKDESKRPKYKELLKHPFILMYEE 294 (327)
T ss_dssp CC-CCCCSSCCCCH----HHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHHH
T ss_pred CC-CCCcccccCCH----HHHHHHHHHhhCChhhCcCHHHHHhChHHHHhHh
Confidence 00 11111122344 4889999999999999999999999999986543
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=337.27 Aligned_cols=267 Identities=14% Similarity=0.192 Sum_probs=201.1
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CC-cEEEEEEccccCCCChhHHHHHHHHHhhccCCc------eeeEeeeeeccCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DG-TLVAIRSLKMSKKSSPHMYTYHIELISKLRHSN------LVSALGHCLDFSL 550 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g-~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~n------Iv~l~~~~~~~~~ 550 (769)
.++|...+.||+|+||+||+|+.. ++ +.||||+++... ...+.+.+|++++++++|++ ++.+++++....
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~- 95 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG- 95 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT-
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC-
Confidence 357888999999999999999975 44 789999997432 23457888999999998766 899999887633
Q ss_pred CCCCcceEEEEEeccCCCchhhhhc-CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceee---------
Q 004195 551 DDPSISIIYLIFEYAPNETLRSFIS-GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLL--------- 620 (769)
Q Consensus 551 ~~~~~~~~~lV~Ey~~~gsL~~~l~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl--------- 620 (769)
..++||||+ ++++.+++. .....+++..+..++.|+++||+|||+. +|+||||||+|||+
T Consensus 96 ------~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~ 165 (355)
T 2eu9_A 96 ------HMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLY 165 (355)
T ss_dssp ------EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEE
T ss_pred ------eEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccc
Confidence 489999999 556666665 4334699999999999999999999998 99999999999999
Q ss_pred ----------CCCceeeecCCCCchhhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchh
Q 004195 621 ----------DENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVV 690 (769)
Q Consensus 621 ----------d~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~ 690 (769)
+.++.+||+|||+++...... ....++..|++||.+.+..++.++|||||||++|||+||++||.....
T Consensus 166 ~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 244 (355)
T 2eu9_A 166 NEHKSCEEKSVKNTSIRVADFGSATFDHEHH-TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHEN 244 (355)
T ss_dssp CCC-CCCEEEESCCCEEECCCTTCEETTSCC-CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred cccccccccccCCCcEEEeecCccccccccc-cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCH
Confidence 567899999999997644322 233455678889999888999999999999999999999999976543
Q ss_pred HHHHhhhhhcccc-cccc-----------------c----------cccCc-cccCCCCHHHHHHHHHHHHHcCcCCCCC
Q 004195 691 VLVKDLLQVNIGT-DEAR-----------------K----------SIVDP-AVMNECSDESLKRMMELCLRCLSNEPKD 741 (769)
Q Consensus 691 ~~~~~~~~~~~~~-~~~~-----------------~----------~~~d~-~~~~~~~~~~~~~l~~li~~cl~~dP~~ 741 (769)
......+...... +..+ . +...+ ............++.+++.+||+.||++
T Consensus 245 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 324 (355)
T 2eu9_A 245 REHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQ 324 (355)
T ss_dssp HHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred HHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhh
Confidence 3222111111110 0000 0 00000 0000112234567899999999999999
Q ss_pred CCCHHHHHHHhHhhhhh
Q 004195 742 RPSVEDTLWNLQFATQI 758 (769)
Q Consensus 742 RPs~~evl~~l~~~~~~ 758 (769)
|||++|+++|+||....
T Consensus 325 Rpt~~e~l~hp~f~~~~ 341 (355)
T 2eu9_A 325 RITLAEALLHPFFAGLT 341 (355)
T ss_dssp SCCHHHHTTSGGGGGCC
T ss_pred CcCHHHHhcChhhcCCC
Confidence 99999999999998643
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-38 Score=341.71 Aligned_cols=272 Identities=13% Similarity=0.177 Sum_probs=204.8
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhcc-----------CCceeeEeeeeec
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLR-----------HSNLVSALGHCLD 547 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-----------H~nIv~l~~~~~~ 547 (769)
++|...+.||+|+||+||+|+.. +|+.||||++.... ...+.+.+|++++++++ ||||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 46888999999999999999974 79999999997431 23456889999999886 8999999999876
Q ss_pred cCCCCCCcceEEEEEeccCCCchhhhhcC-CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeC-----
Q 004195 548 FSLDDPSISIIYLIFEYAPNETLRSFISG-PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD----- 621 (769)
Q Consensus 548 ~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld----- 621 (769)
... .....++||||+ +++|.+++.. ....+++..+..++.||+.||+|||+.+ +|+||||||+|||++
T Consensus 98 ~~~---~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~ 171 (373)
T 1q8y_A 98 KGP---NGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSP 171 (373)
T ss_dssp EET---TEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETT
T ss_pred cCC---CCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCC
Confidence 431 234689999999 8999999973 3346999999999999999999999842 899999999999994
Q ss_pred -CCceeeecCCCCchhhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchh-------HHH
Q 004195 622 -ENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVV-------VLV 693 (769)
Q Consensus 622 -~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~-------~~~ 693 (769)
..+.+||+|||+++...... ....++..|++||.+.+..++.++|||||||++|||+||+.||..... ...
T Consensus 172 ~~~~~~kl~Dfg~a~~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~ 250 (373)
T 1q8y_A 172 ENLIQIKIADLGNACWYDEHY-TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHI 250 (373)
T ss_dssp TTEEEEEECCCTTCEETTBCC-CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHH
T ss_pred cCcceEEEcccccccccCCCC-CCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHH
Confidence 45589999999997654332 233445678889999888899999999999999999999999975321 111
Q ss_pred Hhhhhhcccccc-----------------ccccccCcc---------ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHH
Q 004195 694 KDLLQVNIGTDE-----------------ARKSIVDPA---------VMNECSDESLKRMMELCLRCLSNEPKDRPSVED 747 (769)
Q Consensus 694 ~~~~~~~~~~~~-----------------~~~~~~d~~---------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 747 (769)
..+.......+. ....+.... -....+.....++.+++.+||+.||++|||++|
T Consensus 251 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 330 (373)
T 1q8y_A 251 AQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGG 330 (373)
T ss_dssp HHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHH
T ss_pred HHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHH
Confidence 111111000000 000000000 011345677788999999999999999999999
Q ss_pred HHHHhHhhhhhc
Q 004195 748 TLWNLQFATQIQ 759 (769)
Q Consensus 748 vl~~l~~~~~~~ 759 (769)
+++|+||.....
T Consensus 331 ll~hp~f~~~~~ 342 (373)
T 1q8y_A 331 LVNHPWLKDTLG 342 (373)
T ss_dssp HHTCGGGTTCTT
T ss_pred HhhChhhhcccC
Confidence 999999986543
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-37 Score=327.00 Aligned_cols=241 Identities=15% Similarity=0.184 Sum_probs=183.4
Q ss_pred cCCCCc-CccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHH-hhccCCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDSS-SFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELI-SKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~~-~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l-~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
++|... +.||+|+||.||+|+.. +++.||||+++. ...+.+|++++ +..+||||+++++++.+... ...
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~---~~~ 88 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYA---GRK 88 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEET---TEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcC---CCc
Confidence 456665 78999999999999975 789999999963 35688899988 55589999999999875221 134
Q ss_pred eEEEEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC---CceeeecCCC
Q 004195 557 IIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE---NFHVKINSYN 632 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---~~~~kl~DFG 632 (769)
..++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg 165 (299)
T 3m2w_A 89 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFG 165 (299)
T ss_dssp EEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCT
T ss_pred eEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccc
Confidence 589999999999999999743 34699999999999999999999999 9999999999999998 7889999999
Q ss_pred CchhhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccC
Q 004195 633 LPLLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVD 712 (769)
Q Consensus 633 la~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 712 (769)
++.... ...++.++|||||||++|||+||++||.................. .... ..
T Consensus 166 ~a~~~~--------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~--~~~~-~~ 222 (299)
T 3m2w_A 166 FAKETT--------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM--GQYE-FP 222 (299)
T ss_dssp TCEECT--------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCT--TCCS-SC
T ss_pred cccccc--------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhh--cccc-CC
Confidence 875332 234677999999999999999999999754322111100000000 0000 00
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 713 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
+.....++ .++.+++.+||+.||++|||+.|+++|+|+....
T Consensus 223 ~~~~~~~~----~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~ 264 (299)
T 3m2w_A 223 NPEWSEVS----EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 264 (299)
T ss_dssp HHHHTTSC----HHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGG
T ss_pred chhcccCC----HHHHHHHHHHcccChhhCCCHHHHhcChhhcccc
Confidence 00001223 3489999999999999999999999999997654
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-37 Score=364.81 Aligned_cols=315 Identities=19% Similarity=0.235 Sum_probs=197.8
Q ss_pred ccCCHHHHHHHHHHHHhcCCCCCCCCCCCCC---CCCC--CCCCC-------CCCcceEec-CCCeeEEEeCCCCCCCCC
Q 004195 26 NQLQLFQYQTLVRIQQLLNYPSVSSSFNTTT---VTDF--CNIEP-------TPSLTLVCY-EDNLTQLHIAGDNNNNIN 92 (769)
Q Consensus 26 ~~~~~~~~~~ll~~k~~~~~~~~l~~w~~~~---~~~~--c~~~~-------~~~~~v~C~-~~~v~~l~l~~~~~~~~~ 92 (769)
+++...|++||++||+++.+| +|+.+. ..+| |.|.. ....||.|+ .++|+.|+|+++.+.
T Consensus 264 ~~~~~~d~~ALl~~k~~l~~~----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~--- 336 (876)
T 4ecn_A 264 TAEYIKDYKALKAIWEALDGK----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAK--- 336 (876)
T ss_dssp CCHHHHHHHHHHHHHHHTTGG----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCE---
T ss_pred cccchHHHHHHHHHHHHcCCC----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCC---
Confidence 344567999999999999876 787654 1245 99911 111469997 478999999876554
Q ss_pred CCCCCCCCCCccccccCCCCCCcEEEe-ecccccCC--------------------------------------------
Q 004195 93 GGLAHNFSTDTFFSTLGSLSSLKVLSL-VSLGLWGP-------------------------------------------- 127 (769)
Q Consensus 93 ~~l~~n~~~~~~~~~~~~l~~L~~L~L-~~n~l~g~-------------------------------------------- 127 (769)
+.+|+.|++|++|++|+| ++|.++|.
T Consensus 337 ---------G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~ 407 (876)
T 4ecn_A 337 ---------GRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDA 407 (876)
T ss_dssp ---------EEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHH
T ss_pred ---------CcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHH
Confidence 345566667777777777 55544433
Q ss_pred --------------------------------CCccccCCCcCceeeccCcccCC-----------------cCCcccc-
Q 004195 128 --------------------------------LPGSIAHSSSLEILNLSSNYLSG-----------------SIPVQIS- 157 (769)
Q Consensus 128 --------------------------------~p~~~~~l~~L~~L~Ls~N~l~g-----------------~~p~~~~- 157 (769)
+|..|+++++|++|+|++|+|+| .+|..++
T Consensus 408 l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f 487 (876)
T 4ecn_A 408 INRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSW 487 (876)
T ss_dssp HHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCG
T ss_pred hhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhh
Confidence 56666666666666666666666 2666655
Q ss_pred -CCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCC-Ccc-cCCccccCCC-------CCCEEEccCccccccCCC-
Q 004195 158 -SLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNS-LSG-FLPVSLTGLQ-------SLRVVSLSANHLSGEIPD- 226 (769)
Q Consensus 158 -~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~l~~l~-------~L~~L~ls~N~l~~~~p~- 226 (769)
+|++|++|+|++|++.+.+|..|+++++|++|+|++|+ ++| .+|..+++++ +|+.|+|++|+++ .+|.
T Consensus 488 ~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~ 566 (876)
T 4ecn_A 488 SNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPAS 566 (876)
T ss_dssp GGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCH
T ss_pred ccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCCh
Confidence 66666666666666666666666666666666666666 666 5665554443 6666666666666 4444
Q ss_pred --CCCCccCcEEeccCCcCCCCCccc--ccCCcEEEeCCccccCCcCchhhcCCCc-CcEEeccCccccccCCccCCCCC
Q 004195 227 --LRNLKNLRVFDVQDNYFGPRFPRL--HKKMVTLVLRNNRFQFGLNPDELRSYNQ-LQKLDISLNRFVGPFIPSLLSLP 301 (769)
Q Consensus 227 --l~~l~~L~~l~l~~N~l~~~~p~~--~~~L~~L~l~~N~~~~~i~p~~~~~l~~-L~~L~Ls~N~l~~~~~~~~~~l~ 301 (769)
++++++|+.|++++|.++ .+|.. +++|+.|+|++|.++ .+ |..+..+++ |+.|+|++|.++ .+|..+..++
T Consensus 567 ~~l~~L~~L~~L~Ls~N~l~-~lp~~~~L~~L~~L~Ls~N~l~-~l-p~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~ 642 (876)
T 4ecn_A 567 ASLQKMVKLGLLDCVHNKVR-HLEAFGTNVKLTDLKLDYNQIE-EI-PEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKS 642 (876)
T ss_dssp HHHTTCTTCCEEECTTSCCC-BCCCCCTTSEESEEECCSSCCS-CC-CTTSCEECTTCCEEECCSSCCC-SCCSCCCTTC
T ss_pred hhhhcCCCCCEEECCCCCcc-cchhhcCCCcceEEECcCCccc-cc-hHHHhhccccCCEEECcCCCCC-cCchhhhccc
Confidence 666666666666666666 55532 345666666666666 44 556666666 666666666666 4555555543
Q ss_pred C--CCEEEccCCcCCccccccC---C--CCCCCcEEEccCCcCCCCCCccc-cccCCCceEECCCCCCC
Q 004195 302 S--ITYLDIHGNKLTGLLLQNM---S--CNPQLAFVDLSSNLLTGYLPSCL-QVEAKTRLVLYSKNCLS 362 (769)
Q Consensus 302 ~--L~~L~l~~N~l~~~~~~~~---~--~l~~L~~l~l~~N~l~g~~p~~~-~~~~~l~~l~l~~N~l~ 362 (769)
. |+.|+|++|++++.+|... . .+++|+.|+|++|+++ .+|..+ ..+++++.|++++|.++
T Consensus 643 ~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~ 710 (876)
T 4ecn_A 643 VYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT 710 (876)
T ss_dssp SSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS
T ss_pred cCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC
Confidence 3 6666666666666544321 1 2335666666666666 334333 35566666666666665
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-37 Score=345.40 Aligned_cols=255 Identities=14% Similarity=0.142 Sum_probs=197.4
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCC-ceeeEeeeeeccCCCCCCcc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHS-NLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~-nIv~l~~~~~~~~~~~~~~~ 556 (769)
.++|...+.||+|+||.||+|+.. +++.||||++.... ...++.+|+++++.++|+ +|..+..++.+. .
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~-------~ 76 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLLYESKIYRILQGGTGIPNVRWFGVEG-------D 76 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC--SSCCHHHHHHHHHHTTTSTTCCCEEEEEEET-------T
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc--ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeC-------C
Confidence 467889999999999999999964 79999999887543 234688999999999874 555555444432 3
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceee---CCCceeeecCCCC
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLL---DENFHVKINSYNL 633 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl---d~~~~~kl~DFGl 633 (769)
..++||||+ +++|.+++......+++..++.|+.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||+
T Consensus 77 ~~~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGl 152 (483)
T 3sv0_A 77 YNVLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGL 152 (483)
T ss_dssp EEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTT
T ss_pred EEEEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCc
Confidence 479999999 8999999985455799999999999999999999999 99999999999999 6889999999999
Q ss_pred chhhhccCC---------cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchh----HHHHhhhhhc
Q 004195 634 PLLAEARGK---------GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVV----VLVKDLLQVN 700 (769)
Q Consensus 634 a~~~~~~~~---------~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~----~~~~~~~~~~ 700 (769)
++....... ....++..|++||.+.+..++.++|||||||++|||++|+.||..... ..+..+....
T Consensus 153 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~ 232 (483)
T 3sv0_A 153 AKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK 232 (483)
T ss_dssp CEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHH
T ss_pred ceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcc
Confidence 976543321 123455678889999888999999999999999999999999975322 1111111110
Q ss_pred cccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 701 IGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 701 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.. . ..+.+...+++ ++.+++.+||+.||++||++++|++.+.....
T Consensus 233 ~~------~-~~~~l~~~~p~----~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~ 278 (483)
T 3sv0_A 233 VA------T-SIEALCRGYPT----EFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI 278 (483)
T ss_dssp HH------S-CHHHHHTTSCH----HHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred cc------c-cHHHHhcCCcH----HHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 00 0 00111123343 48999999999999999999999998876644
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-37 Score=344.94 Aligned_cols=252 Identities=14% Similarity=0.217 Sum_probs=189.1
Q ss_pred CCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCCcceEE
Q 004195 481 CFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +|||||++++++.+.. ..+
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~-------~~~ 85 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDR-------FLY 85 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSS-------EEE
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCC-------eEE
Confidence 34456889999999998776668999999998643 245678999999887 8999999999987633 489
Q ss_pred EEEeccCCCchhhhhcCCCCC------CCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC----------
Q 004195 560 LIFEYAPNETLRSFISGPGYK------LTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN---------- 623 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~~~~------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~---------- 623 (769)
+|||||+ |+|.+++...... .++..+..++.||+.||+|||+. +|+||||||+|||++.+
T Consensus 86 lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~ 161 (434)
T 2rio_A 86 IALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTG 161 (434)
T ss_dssp EEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTC
T ss_pred EEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccC
Confidence 9999995 6999999854311 13334578999999999999999 99999999999999754
Q ss_pred ---ceeeecCCCCchhhhccCC------cceeecCCCcchhhhcc-------CCCCCCCCeeehhHHHHHHHh-CCCCCC
Q 004195 624 ---FHVKINSYNLPLLAEARGK------GSAEVSSPAKKTSVLAR-------TEQDDKSDVYDIGIILIEIIV-GRPITS 686 (769)
Q Consensus 624 ---~~~kl~DFGla~~~~~~~~------~~~~~~~~~~~pe~~~~-------~~~~~ksDVwS~Gvil~ellt-G~~p~~ 686 (769)
+.+||+|||+++....... ....++..|++||.+.+ ..++.++|||||||++|||+| |+.||.
T Consensus 162 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~ 241 (434)
T 2rio_A 162 AENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 241 (434)
T ss_dssp CCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTC
T ss_pred CCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCC
Confidence 4899999999976543221 12345667888998865 568999999999999999999 899987
Q ss_pred CchhHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 687 ENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
...... ..+....... +............++.+++.+||+.||++|||+.||++|+||..
T Consensus 242 ~~~~~~-~~i~~~~~~~---------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~ 301 (434)
T 2rio_A 242 DKYSRE-SNIIRGIFSL---------DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWP 301 (434)
T ss_dssp STTTHH-HHHHHTCCCC---------CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSC
T ss_pred CchhhH-HHHhcCCCCc---------ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccCC
Confidence 543222 1111111110 11111223456677999999999999999999999999999853
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=331.93 Aligned_cols=252 Identities=19% Similarity=0.279 Sum_probs=194.7
Q ss_pred hcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCC--CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKK--SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
.++|...+.||+|+||.||+|+..+ .||+|+++.... ...+.+.+|+.++++++||||+++++++.+...
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~------ 103 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPH------ 103 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSC------
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCc------
Confidence 4578889999999999999999753 499999975432 233568889999999999999999999986443
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
.++||||+++++|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++ ++.+||+|||+++.
T Consensus 104 -~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~ 178 (319)
T 2y4i_B 104 -LAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSI 178 (319)
T ss_dssp -EEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC-
T ss_pred -eEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCccc
Confidence 8999999999999999987666799999999999999999999999 999999999999998 67999999999865
Q ss_pred hhccC-------CcceeecCCCcchhhhcc---------CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhc
Q 004195 637 AEARG-------KGSAEVSSPAKKTSVLAR---------TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVN 700 (769)
Q Consensus 637 ~~~~~-------~~~~~~~~~~~~pe~~~~---------~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~ 700 (769)
..... .....++..|.+||.+.. ..++.++|||||||++|||+||+.||...........+...
T Consensus 179 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~ 258 (319)
T 2y4i_B 179 SGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTG 258 (319)
T ss_dssp ---------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTT
T ss_pred cccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccC
Confidence 42111 111223456778887753 35788999999999999999999999865543332221111
Q ss_pred cccccccccccCcccc-CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 701 IGTDEARKSIVDPAVM-NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 701 ~~~~~~~~~~~d~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
..+... ..+++ ++.+++.+||+.||++|||+.|+++.+.....
T Consensus 259 ----------~~~~~~~~~~~~----~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~ 302 (319)
T 2y4i_B 259 ----------MKPNLSQIGMGK----EISDILLFCWAFEQEERPTFTKLMDMLEKLPK 302 (319)
T ss_dssp ----------CCCCCCCSSCCT----THHHHHHHHHCSSTTTSCCHHHHHHHHTTC--
T ss_pred ----------CCCCCCcCCCCH----HHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 011111 12232 38899999999999999999999999986654
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-37 Score=359.92 Aligned_cols=255 Identities=16% Similarity=0.239 Sum_probs=201.7
Q ss_pred hcCCCCcCccccCCceeEEEEEeC----CCcEEEEEEccccCCC-ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT----DGTLVAIRSLKMSKKS-SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~----~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
.++|...+.||+|+||.||+|++. .+..||||.++..... ..+.+.+|+.++++++|||||++++++.+.
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~----- 463 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN----- 463 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS-----
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC-----
Confidence 456888899999999999999864 2567999998754221 236789999999999999999999998532
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
..++||||+++|+|.+++......+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 464 ---~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~ 537 (656)
T 2j0j_A 464 ---PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGL 537 (656)
T ss_dssp ---SCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCC
T ss_pred ---ceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCC
Confidence 26999999999999999986555799999999999999999999999 999999999999999999999999999
Q ss_pred chhhhccCCc---ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhcccccccccc
Q 004195 634 PLLAEARGKG---SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKS 709 (769)
Q Consensus 634 a~~~~~~~~~---~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (769)
++........ ....+..|++||.+....++.++|||||||++|||++ |++||...........+....
T Consensus 538 a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~-------- 609 (656)
T 2j0j_A 538 SRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-------- 609 (656)
T ss_dssp CCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTC--------
T ss_pred CeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC--------
Confidence 9765432211 1122345888999988899999999999999999997 999987654333222221110
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 710 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
.+.....+++ .+.+++.+||+.||++|||+.|+++.+..+.+.
T Consensus 610 --~~~~~~~~~~----~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 610 --RLPMPPNCPP----TLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp --CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --CCCCCccccH----HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 1112223344 488999999999999999999999999876543
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-38 Score=347.72 Aligned_cols=251 Identities=15% Similarity=0.214 Sum_probs=189.1
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCCcceE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
.+|...+.||+|+||+||.....+|+.||||++... ....+.+|+++++++ +|||||++++++.+.. ..
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~-------~~ 93 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPE---CFSFADREVQLLRESDEHPNVIRYFCTEKDRQ-------FQ 93 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTT---TEEECHHHHHHHHHSCCCTTBCCEEEEEEETT-------EE
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCC-------EE
Confidence 457788999999999976555567999999999643 234567899999999 7999999999987643 48
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC-----CceeeecCCCC
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE-----NFHVKINSYNL 633 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~-----~~~~kl~DFGl 633 (769)
++|||||+ |+|.+++........+..+..++.||++||+|||+. +|+||||||+|||++. ...+||+|||+
T Consensus 94 ~lv~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~ 169 (432)
T 3p23_A 94 YIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGL 169 (432)
T ss_dssp EEEEECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTE
T ss_pred EEEEECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccc
Confidence 99999996 699999986654566667789999999999999999 9999999999999943 33578999999
Q ss_pred chhhhccC-----CcceeecCCCcchhhhc---cCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccc
Q 004195 634 PLLAEARG-----KGSAEVSSPAKKTSVLA---RTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTD 704 (769)
Q Consensus 634 a~~~~~~~-----~~~~~~~~~~~~pe~~~---~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 704 (769)
++...... .....++..|++||.+. ...++.++|||||||++|||+| |++||............. ...
T Consensus 170 a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~-~~~-- 246 (432)
T 3p23_A 170 CKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLG-ACS-- 246 (432)
T ss_dssp EECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTT-CCC--
T ss_pred eeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhc-cCC--
Confidence 97654321 12233566788899886 4567889999999999999999 889986544332222111 000
Q ss_pred cccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 705 EARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 705 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.... .........+.+++.+||+.||++|||++||++|+||..
T Consensus 247 ---~~~~------~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~ 289 (432)
T 3p23_A 247 ---LDCL------HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWS 289 (432)
T ss_dssp ---CTTS------CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCC
T ss_pred ---cccc------CccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccC
Confidence 0000 111233455789999999999999999999999999853
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-37 Score=328.24 Aligned_cols=254 Identities=16% Similarity=0.254 Sum_probs=180.5
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC-h-hHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS-P-HMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~-~-~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.++|+..+.||+|+||.||+|+.. +|+.||||++....... . +.+..+..+++.++||||+++++++.+.+
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~------ 97 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNT------ 97 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS------
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCC------
Confidence 356788899999999999999976 79999999997543221 1 23344455678889999999999998643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhccccc-CCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHT-GIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
..++||||+ ++.+..+.......+++..+..++.|+++||+|||+ . +|+||||||+||+++.++.+||+|||++
T Consensus 98 -~~~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 172 (318)
T 2dyl_A 98 -DVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGIS 172 (318)
T ss_dssp -EEEEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred -cEEEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCc
Confidence 489999999 556666655434478999999999999999999998 5 8999999999999999999999999998
Q ss_pred hhhhccC-CcceeecCCCcchhhhc-----cCCCCCCCCeeehhHHHHHHHhCCCCCCCch--hHHHHhhhhhccccccc
Q 004195 635 LLAEARG-KGSAEVSSPAKKTSVLA-----RTEQDDKSDVYDIGIILIEIIVGRPITSENV--VVLVKDLLQVNIGTDEA 706 (769)
Q Consensus 635 ~~~~~~~-~~~~~~~~~~~~pe~~~-----~~~~~~ksDVwS~Gvil~elltG~~p~~~~~--~~~~~~~~~~~~~~~~~ 706 (769)
....... .....++..|.+||.+. ...++.++|||||||++|||+||+.||.... ........... ..
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~---~~- 248 (318)
T 2dyl_A 173 GRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEE---PP- 248 (318)
T ss_dssp --------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSC---CC-
T ss_pred hhccCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccC---CC-
Confidence 6553322 22234556778899873 4568999999999999999999999997532 12222211110 00
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 707 RKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 707 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.. + ....+++ .+.+++.+||+.||++||+++|+++|+|+..
T Consensus 249 --~~--~-~~~~~~~----~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~ 289 (318)
T 2dyl_A 249 --LL--P-GHMGFSG----DFQSFVKDCLTKDHRKRPKYNKLLEHSFIKR 289 (318)
T ss_dssp --CC--C-SSSCCCH----HHHHHHHHHTCSCTTTSCCHHHHTTSHHHHH
T ss_pred --CC--C-ccCCCCH----HHHHHHHHHccCChhHCcCHHHHhhCHHHHh
Confidence 00 0 0112334 3889999999999999999999999999864
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-37 Score=320.25 Aligned_cols=231 Identities=14% Similarity=0.077 Sum_probs=181.2
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCCh---hHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSP---HMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~---~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|...+.||+|+||.||+|+.. +|+.||||++........ +.+.+|+.++++++||||+++++++.+.+
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~------ 104 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRA------ 104 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT------
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECC------
Confidence 56888999999999999999976 589999999986543332 67899999999999999999999998643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..|+||||+++++|.+++... ....+..+|+.|+++||+|||+. +|+||||||+|||++.++.+||+++|..
T Consensus 105 -~~~lv~e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~~~- 176 (286)
T 3uqc_A 105 -GGLVVAEWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPATM- 176 (286)
T ss_dssp -EEEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCCCC-
T ss_pred -cEEEEEEecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecccc-
Confidence 389999999999999999643 34557888999999999999999 9999999999999999999999966532
Q ss_pred hhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCc-c
Q 004195 636 LAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDP-A 714 (769)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~ 714 (769)
..++.++|||||||++|||+||+.||................. .....+ .
T Consensus 177 ------------------------~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~-----~~~~~~~~ 227 (286)
T 3uqc_A 177 ------------------------PDANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTA-----GQPIEPAD 227 (286)
T ss_dssp ------------------------TTCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTT-----SCBCCHHH
T ss_pred ------------------------CCCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhc-----cCCCChhh
Confidence 1368899999999999999999999975432110000000000 000000 1
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
.....++ .+.+++.+||+.||++| |+.|+++.+..+...
T Consensus 228 ~~~~~~~----~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~ 266 (286)
T 3uqc_A 228 IDRDIPF----QISAVAARSVQGDGGIR-SASTLLNLMQQATAV 266 (286)
T ss_dssp HCTTSCH----HHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred cccCCCH----HHHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence 1123333 48899999999999999 999999999876543
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-36 Score=357.78 Aligned_cols=255 Identities=31% Similarity=0.461 Sum_probs=180.1
Q ss_pred CCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEe
Q 004195 111 LSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLS 190 (769)
Q Consensus 111 l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 190 (769)
+++|+.|+|++|.+++.+|..|+++++|++|+|++|++++.+|..|+++++|++|+|++|++++.+|..|+.+++|++|+
T Consensus 393 ~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 472 (768)
T 3rgz_A 393 KNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLI 472 (768)
T ss_dssp TCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEE
T ss_pred cCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEE
Confidence 45566666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred ccCCCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCCCccc---ccCCcEEEeCCccccC
Q 004195 191 LKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRL---HKKMVTLVLRNNRFQF 266 (769)
Q Consensus 191 L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p~~---~~~L~~L~l~~N~~~~ 266 (769)
|++|++++.+|..++++++|++|+|++|++++.+|. ++.+++|++|++++|.++|.+|.. +++|+.|++++|.++|
T Consensus 473 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g 552 (768)
T 3rgz_A 473 LDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNG 552 (768)
T ss_dssp CCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEES
T ss_pred ecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCC
Confidence 666666666666666666666666666666666554 566666666666666666666643 3456666666666665
Q ss_pred CcCch----------------------------------------------------------------------hhcCC
Q 004195 267 GLNPD----------------------------------------------------------------------ELRSY 276 (769)
Q Consensus 267 ~i~p~----------------------------------------------------------------------~~~~l 276 (769)
.+ |. .+..+
T Consensus 553 ~i-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l 631 (768)
T 3rgz_A 553 TI-PAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNN 631 (768)
T ss_dssp BC-CGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSS
T ss_pred cC-ChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhcc
Confidence 54 33 23345
Q ss_pred CcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEEC
Q 004195 277 NQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLY 356 (769)
Q Consensus 277 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l 356 (769)
++|++|||++|+++|.+|..++++++|+.|+|++|+++|.+|..++.+++|+.|||++|+++|.+|..+..++.++.+++
T Consensus 632 ~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~l 711 (768)
T 3rgz_A 632 GSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDL 711 (768)
T ss_dssp BCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEEC
T ss_pred ccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEEC
Confidence 67888888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred CCCCCChhhh
Q 004195 357 SKNCLSNEEQ 366 (769)
Q Consensus 357 ~~N~l~~~~~ 366 (769)
++|.++|.+|
T Consensus 712 s~N~l~g~iP 721 (768)
T 3rgz_A 712 SNNNLSGPIP 721 (768)
T ss_dssp CSSEEEEECC
T ss_pred cCCcccccCC
Confidence 8888887654
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-37 Score=353.30 Aligned_cols=272 Identities=14% Similarity=0.091 Sum_probs=202.1
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|...+.||+|+||.||+|+.. +|+.||||+++.... ...+.+.+|++++++++||||+++++++...... .....
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~-~~~~~ 92 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKL-APNDL 92 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCC-CTTSS
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccc-cCCCe
Confidence 67999999999999999999975 699999999875421 2245688999999999999999999998652221 11344
Q ss_pred EEEEEeccCCCchhhhhcCCC--CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCce---eeecCCC
Q 004195 558 IYLIFEYAPNETLRSFISGPG--YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH---VKINSYN 632 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~---~kl~DFG 632 (769)
.++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 799999999999999998432 3589999999999999999999998 9999999999999987664 9999999
Q ss_pred CchhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcc-------ccc
Q 004195 633 LPLLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNI-------GTD 704 (769)
Q Consensus 633 la~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~-------~~~ 704 (769)
+++....... ....++..|.+||.+.+..++.++|||||||++|||+||+.||....... .+..... ...
T Consensus 170 ~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~--~~~~~i~~~~~~~~~~~ 247 (676)
T 3qa8_A 170 YAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPV--QWHGKVREKSNEHIVVY 247 (676)
T ss_dssp CCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHH--HSSTTCC------CCSC
T ss_pred cccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchh--hhhhhhhcccchhhhhh
Confidence 9976544332 22344567788999888899999999999999999999999987542211 1100000 000
Q ss_pred cccccc--c--CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 705 EARKSI--V--DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 705 ~~~~~~--~--d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
...... + ...............+.+++.+||+.||++|||+.|+++|+||..-
T Consensus 248 ~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l 304 (676)
T 3qa8_A 248 DDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQAL 304 (676)
T ss_dssp CCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHH
T ss_pred hhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHH
Confidence 000000 0 0011123344566779999999999999999999999999998753
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-36 Score=333.78 Aligned_cols=254 Identities=12% Similarity=0.094 Sum_probs=187.4
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC---ChhHHHHHHHHHhhccC-CceeeEe---------ee
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS---SPHMYTYHIELISKLRH-SNLVSAL---------GH 544 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~---~~~~~~~Ei~~l~~l~H-~nIv~l~---------~~ 544 (769)
+..|...+.||+|+||+||+|++. +|+.||||+++..... ..+.+.+|+.+++.++| +|..... +.
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 345667789999999999999965 7999999999844322 24679999999999987 3221111 11
Q ss_pred eeccCC----------CCCCcceEEEEEeccCCCchhhhhc------CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCc
Q 004195 545 CLDFSL----------DDPSISIIYLIFEYAPNETLRSFIS------GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608 (769)
Q Consensus 545 ~~~~~~----------~~~~~~~~~lV~Ey~~~gsL~~~l~------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i 608 (769)
+..... ........+++|+++ +++|.+++. .....++|..+..++.|+++||+|||+. +|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 110000 000122367788876 589999884 3344688999999999999999999999 99
Q ss_pred cccCccccceeeCCCceeeecCCCCchhhhccCCcceeecCCCcchhhh----------ccCCCCCCCCeeehhHHHHHH
Q 004195 609 FSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVL----------ARTEQDDKSDVYDIGIILIEI 678 (769)
Q Consensus 609 vHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~----------~~~~~~~ksDVwS~Gvil~el 678 (769)
+||||||+|||++.++.+||+|||+++...... ....+ ..|++||.+ ....++.++|||||||++|||
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~~-~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~el 310 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASA-VSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWI 310 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEEE-CCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCcc-ccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHH
Confidence 999999999999999999999999987654442 22333 778889988 555688899999999999999
Q ss_pred HhCCCCCCCchhHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 679 IVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 679 ltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
+||+.||.......... .++.. ...+++ .+.+++.+||+.||++||++.|+++|+||..-
T Consensus 311 ltg~~Pf~~~~~~~~~~-------------~~~~~--~~~~~~----~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~~ 370 (413)
T 3dzo_A 311 WCADLPNTDDAALGGSE-------------WIFRS--CKNIPQ----PVRALLEGFLRYPKEDRLLPLQAMETPEYEQL 370 (413)
T ss_dssp HHSSCCCCTTGGGSCSG-------------GGGSS--CCCCCH----HHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred HHCCCCCCCcchhhhHH-------------HHHhh--cccCCH----HHHHHHHHHccCChhhCcCHHHHHhCHHHHHH
Confidence 99999997543211110 01110 012333 48899999999999999999999999998654
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-35 Score=346.97 Aligned_cols=243 Identities=16% Similarity=0.256 Sum_probs=190.2
Q ss_pred cCCCCcCccccCCceeEEEEEeC--CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT--DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~--~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
++|...+.||+|+||.||+|++. +|+.||||++..... ...+.+.+|++++++++|||||+++++|.+.+.. ...
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~--~~~ 157 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRH--GDP 157 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTT--SCE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCC--CCc
Confidence 67889999999999999999975 689999999875322 2235688999999999999999999999864431 123
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..|+||||+++++|.+++.. .++|.+++.|+.||++||+|||+. +|+||||||+|||++.+ .+||+|||+++.
T Consensus 158 ~~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~ 230 (681)
T 2pzi_A 158 VGYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSR 230 (681)
T ss_dssp EEEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred eeEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchh
Confidence 36999999999999998765 589999999999999999999999 99999999999999885 899999999976
Q ss_pred hhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCcccc
Q 004195 637 AEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM 716 (769)
Q Consensus 637 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 716 (769)
.... ....++..|++||.+.+. ++.++|||||||++|||++|.+|+....... .. .
T Consensus 231 ~~~~--~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~--------~~---------~---- 286 (681)
T 2pzi_A 231 INSF--GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDG--------LP---------E---- 286 (681)
T ss_dssp TTCC--SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSS--------CC---------T----
T ss_pred cccC--CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccccc--------cc---------c----
Confidence 5433 333456678889987654 5899999999999999999998876421100 00 0
Q ss_pred CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 717 NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 717 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
..........+.+++.+||+.||++||+..+.+.+.++.
T Consensus 287 ~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 287 DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 000012234588999999999999999877777776653
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-35 Score=319.66 Aligned_cols=252 Identities=12% Similarity=0.088 Sum_probs=187.1
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCC--------CChhHHHHHHHHHhhcc---------CCceeeEe
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKK--------SSPHMYTYHIELISKLR---------HSNLVSAL 542 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~--------~~~~~~~~Ei~~l~~l~---------H~nIv~l~ 542 (769)
++|...+.||+|+||+||+|+. +|+.||||+++.... ...+.+.+|++++++++ |||||++.
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~ 98 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN 98 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred ccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence 4577889999999999999998 689999999986532 12367899999999986 77777776
Q ss_pred eeeeccCCC-----------------------CCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcc
Q 004195 543 GHCLDFSLD-----------------------DPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQF 599 (769)
Q Consensus 543 ~~~~~~~~~-----------------------~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~y 599 (769)
+++...... .......++|||||++|++.+.+.+ ..+++..+..|+.||+.||+|
T Consensus 99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~~ 176 (336)
T 2vuw_A 99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLAV 176 (336)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHHH
T ss_pred ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHHH
Confidence 654311000 0013458999999999987776654 358999999999999999999
Q ss_pred cc-cCCCCCccccCccccceeeCCCc--------------------eeeecCCCCchhhhccCCcceeecCCCcchhhhc
Q 004195 600 LH-TGIVPGVFSNNLKITDVLLDENF--------------------HVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLA 658 (769)
Q Consensus 600 LH-~~~~~~ivHrDlKp~NILld~~~--------------------~~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~ 658 (769)
|| +. +|+||||||+|||++.++ .+||+|||+|+.... ....++..|++||.+.
T Consensus 177 lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~---~~~~gt~~y~aPE~~~ 250 (336)
T 2vuw_A 177 AEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD---GIVVFCDVSMDEDLFT 250 (336)
T ss_dssp HHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET---TEEECCCCTTCSGGGC
T ss_pred HHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC---CcEEEeecccChhhhc
Confidence 99 88 999999999999999887 899999999976543 2345566788899887
Q ss_pred cCCCCCCCCeeehhHH-HHHHHhCCCCCCCchh--HHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcC
Q 004195 659 RTEQDDKSDVYDIGII-LIEIIVGRPITSENVV--VLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCL 735 (769)
Q Consensus 659 ~~~~~~ksDVwS~Gvi-l~elltG~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl 735 (769)
+.. +.++||||+|++ .+++++|..||..... ......... .. ..........+....++.+|+.+||
T Consensus 251 g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~-~~--------~~~~~~~~~~~~~s~~~~dli~~~L 320 (336)
T 2vuw_A 251 GDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQ-MT--------FKTKCNTPAMKQIKRKIQEFHRTML 320 (336)
T ss_dssp CCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHT-CC--------CSSCCCSHHHHHHHHHHHHHHHHGG
T ss_pred CCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhh-hc--------cCcccchhhhhhcCHHHHHHHHHHh
Confidence 555 889999998777 7789999999853210 011111100 00 0011111123456778999999999
Q ss_pred cCCCCCCCCHHHHH-HHhHhh
Q 004195 736 SNEPKDRPSVEDTL-WNLQFA 755 (769)
Q Consensus 736 ~~dP~~RPs~~evl-~~l~~~ 755 (769)
+.| |++|++ +|+||.
T Consensus 321 ~~d-----sa~e~l~~Hp~f~ 336 (336)
T 2vuw_A 321 NFS-----SATDLLCQHSLFK 336 (336)
T ss_dssp GSS-----SHHHHHHHCGGGC
T ss_pred ccC-----CHHHHHhcCCCcC
Confidence 976 999999 999973
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-33 Score=314.99 Aligned_cols=268 Identities=19% Similarity=0.198 Sum_probs=196.9
Q ss_pred CCCCCCCccccccCCCCCCcEEEeecccccCCC-CccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCc
Q 004195 96 AHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPL-PGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTG 174 (769)
Q Consensus 96 ~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~-p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~ 174 (769)
++|.+.+..|..|+++++|++|+|++|.+.+.+ |..|.++++|++|+|++|++++..|..|+++++|++|+|++|++++
T Consensus 38 s~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 117 (455)
T 3v47_A 38 SLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDG 117 (455)
T ss_dssp CSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBT
T ss_pred cCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCc
Confidence 334444445666777777777777777776554 4567777777777777777777777777777777777777777776
Q ss_pred cCCcc--CcCCcCCCEEeccCCCCcccCCcc-ccCCCCCCEEEccCccccccCCC-CC----------------------
Q 004195 175 AVPSE--LSLLQVLSVLSLKNNSLSGFLPVS-LTGLQSLRVVSLSANHLSGEIPD-LR---------------------- 228 (769)
Q Consensus 175 ~~p~~--~~~l~~L~~L~L~~N~l~~~~p~~-l~~l~~L~~L~ls~N~l~~~~p~-l~---------------------- 228 (769)
.+|.. |..+++|++|+|++|++++..|.. +.++++|++|++++|++++..+. +.
T Consensus 118 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~ 197 (455)
T 3v47_A 118 AVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNE 197 (455)
T ss_dssp HHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCST
T ss_pred cccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccch
Confidence 55544 777777777777777777766665 67777777777777777765553 22
Q ss_pred ------------CCccCcEEeccCCcCCCCCccc------------------------------------------ccCC
Q 004195 229 ------------NLKNLRVFDVQDNYFGPRFPRL------------------------------------------HKKM 254 (769)
Q Consensus 229 ------------~l~~L~~l~l~~N~l~~~~p~~------------------------------------------~~~L 254 (769)
.+++|+.|++++|.+++..|.. ..+|
T Consensus 198 ~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 277 (455)
T 3v47_A 198 YWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGV 277 (455)
T ss_dssp TCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCC
T ss_pred hhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCc
Confidence 3356777888877775433321 1367
Q ss_pred cEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccC
Q 004195 255 VTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSS 334 (769)
Q Consensus 255 ~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~ 334 (769)
+.|++++|.+++.+ |..+..+++|++|+|++|++.+..|..|.++++|+.|+|++|++++..+..+..+++|+.|+|++
T Consensus 278 ~~L~l~~n~l~~~~-~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 356 (455)
T 3v47_A 278 KTCDLSKSKIFALL-KSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSY 356 (455)
T ss_dssp CEEECCSSCCCEEC-TTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCS
T ss_pred eEEEecCccccccc-hhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCC
Confidence 77888888877554 77788888888888888888887777888888888888888888887788888888888888888
Q ss_pred CcCCCCCCccccccCCCceEECCCCCCChh
Q 004195 335 NLLTGYLPSCLQVEAKTRLVLYSKNCLSNE 364 (769)
Q Consensus 335 N~l~g~~p~~~~~~~~l~~l~l~~N~l~~~ 364 (769)
|++++..|..+..+++++.+++++|.+++.
T Consensus 357 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 386 (455)
T 3v47_A 357 NHIRALGDQSFLGLPNLKELALDTNQLKSV 386 (455)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CcccccChhhccccccccEEECCCCccccC
Confidence 888888888888888888888888887653
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-33 Score=298.28 Aligned_cols=275 Identities=18% Similarity=0.178 Sum_probs=172.7
Q ss_pred CCHHHHHHHHHHHHhc-CCCC-CCCCCC----CCCCCCCCCCCCCCCcceEecCCCeeEEEeCCCCCCCCCCCCCCCCCC
Q 004195 28 LQLFQYQTLVRIQQLL-NYPS-VSSSFN----TTTVTDFCNIEPTPSLTLVCYEDNLTQLHIAGDNNNNINGGLAHNFST 101 (769)
Q Consensus 28 ~~~~~~~~ll~~k~~~-~~~~-~l~~w~----~~~~~~~c~~~~~~~~~v~C~~~~v~~l~l~~~~~~~~~~~l~~n~~~ 101 (769)
+..+|++||++||..+ .++. .+.+|. ... ++|.|. |+.|..-. . .+
T Consensus 24 ~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~--~~~~~~-----g~~~~~~~--~-------------~l------ 75 (328)
T 4fcg_A 24 ALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNP--QIETRT-----GRALKATA--D-------------LL------ 75 (328)
T ss_dssp CCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCT--TSCCSH-----HHHHHHHH--H-------------HH------
T ss_pred cCchHHHHHHHHHHhccCCchhhhhhhcccccccc--cccccC-----CcchhhhH--H-------------HH------
Confidence 4467899999999987 4553 456783 233 789987 47774200 0 00
Q ss_pred CccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCc
Q 004195 102 DTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELS 181 (769)
Q Consensus 102 ~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 181 (769)
.-...++++.|+|++|+++ .+|..++++++|++|+|++|.++ .+|..|+++++|++|+|++|+++ .+|..|+
T Consensus 76 -----~~~~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~ 147 (328)
T 4fcg_A 76 -----EDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIA 147 (328)
T ss_dssp -----HHHTSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGG
T ss_pred -----hcccccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHh
Confidence 0011344556666666664 45555666666666666666666 56666666666666666666665 5566666
Q ss_pred CCcCCCEEeccCCCCcccCCccccC---------CCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCccccc
Q 004195 182 LLQVLSVLSLKNNSLSGFLPVSLTG---------LQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHK 252 (769)
Q Consensus 182 ~l~~L~~L~L~~N~l~~~~p~~l~~---------l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~ 252 (769)
++++|++|+|++|++.+.+|..++. +++|++|+|++|+++..+..++.+++|+.|++++|.+++
T Consensus 148 ~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~~------- 220 (328)
T 4fcg_A 148 SLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLSA------- 220 (328)
T ss_dssp GCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCCC-------
T ss_pred cCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcCcchHhhcCCCCCCEEEccCCCCCc-------
Confidence 6666666666666666566655443 677777777777776333336666666666666655542
Q ss_pred CCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEc
Q 004195 253 KMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDL 332 (769)
Q Consensus 253 ~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l 332 (769)
+ |..+..+++|++|+|++|++.+.+|..+.++++|+.|+|++|++.+.+|..+..+++|+.|+|
T Consensus 221 ---------------l-~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L 284 (328)
T 4fcg_A 221 ---------------L-GPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDL 284 (328)
T ss_dssp ---------------C-CGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEEC
T ss_pred ---------------C-chhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeC
Confidence 2 445666667777777777777767777777777777777777777777776777777777777
Q ss_pred cCCcCCCCCCccccccCCCceEECCCCCC
Q 004195 333 SSNLLTGYLPSCLQVEAKTRLVLYSKNCL 361 (769)
Q Consensus 333 ~~N~l~g~~p~~~~~~~~l~~l~l~~N~l 361 (769)
++|++.+.+|..+..+++++.+.+..|.+
T Consensus 285 ~~n~~~~~iP~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 285 RGCVNLSRLPSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp TTCTTCCCCCGGGGGSCTTCEEECCGGGS
T ss_pred CCCCchhhccHHHhhccCceEEeCCHHHH
Confidence 77777777777777777777776665543
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-32 Score=306.78 Aligned_cols=288 Identities=18% Similarity=0.208 Sum_probs=249.1
Q ss_pred CCeeEEEeCCCCCCCCC------------CCCCCCCCCCcc-ccccCCCCCCcEEEeecccccCCCCccccCCCcCceee
Q 004195 76 DNLTQLHIAGDNNNNIN------------GGLAHNFSTDTF-FSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILN 142 (769)
Q Consensus 76 ~~v~~l~l~~~~~~~~~------------~~l~~n~~~~~~-~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~ 142 (769)
.+++.|+++++.+.... .++++|.+.+.+ +..|.++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 35899999988665431 234456555444 56799999999999999999999999999999999999
Q ss_pred ccCcccCCcCCcc--ccCCCcCCEEEcccCcCCccCCcc-CcCCcCCCEEeccCCCCcccCCccccCC------------
Q 004195 143 LSSNYLSGSIPVQ--ISSLRNLQTLILDDNKFTGAVPSE-LSLLQVLSVLSLKNNSLSGFLPVSLTGL------------ 207 (769)
Q Consensus 143 Ls~N~l~g~~p~~--~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p~~l~~l------------ 207 (769)
|++|++++.+|.. |+++++|++|+|++|++++..|.. |.++++|++|+|++|.+++..|..+.++
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 9999999866665 999999999999999999888877 8999999999999999999888776554
Q ss_pred ----------------------CCCCEEEccCccccccCCC--------------------------------------C
Q 004195 208 ----------------------QSLRVVSLSANHLSGEIPD--------------------------------------L 227 (769)
Q Consensus 208 ----------------------~~L~~L~ls~N~l~~~~p~--------------------------------------l 227 (769)
++|+.|++++|++++.+|. +
T Consensus 190 n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~ 269 (455)
T 3v47_A 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTF 269 (455)
T ss_dssp CBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTT
T ss_pred CcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCccccc
Confidence 6899999999988764331 0
Q ss_pred C--CCccCcEEeccCCcCCCCCccc---ccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCC
Q 004195 228 R--NLKNLRVFDVQDNYFGPRFPRL---HKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPS 302 (769)
Q Consensus 228 ~--~l~~L~~l~l~~N~l~~~~p~~---~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 302 (769)
. ..++|+.|++++|.+.+..|.. +++|+.|+|++|.+++.. |..+..+++|++|+|++|.+.+..|..|.++++
T Consensus 270 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 348 (455)
T 3v47_A 270 KGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKID-DNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDK 348 (455)
T ss_dssp GGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEEC-TTTTTTCTTCCEEECCSSCCCEECGGGGTTCTT
T ss_pred ccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccC-hhHhcCcccCCEEECCCCccCCcChhHhcCccc
Confidence 0 1258999999999999877764 578999999999999654 889999999999999999999988899999999
Q ss_pred CCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCChh
Q 004195 303 ITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSNE 364 (769)
Q Consensus 303 L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~~ 364 (769)
|+.|+|++|++++..|..+..+++|+.|+|++|++++..+..+..+++++.+++++|.+++.
T Consensus 349 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 410 (455)
T 3v47_A 349 LEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 410 (455)
T ss_dssp CCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccC
Confidence 99999999999999999999999999999999999988888888999999999999998765
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.3e-31 Score=301.94 Aligned_cols=286 Identities=19% Similarity=0.173 Sum_probs=204.3
Q ss_pred CeeEEEeCCCCCCCCC------------CCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeecc
Q 004195 77 NLTQLHIAGDNNNNIN------------GGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLS 144 (769)
Q Consensus 77 ~v~~l~l~~~~~~~~~------------~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls 144 (769)
+++.|+++++.+.... .++++|.+.+..|..|.++++|++|+|++|.+++..+..|.++++|++|+|+
T Consensus 33 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 112 (477)
T 2id5_A 33 ETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDIS 112 (477)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECT
T ss_pred CCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECC
Confidence 4666666666543321 1234455555555666666666666666666655544556666666666666
Q ss_pred CcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccC
Q 004195 145 SNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEI 224 (769)
Q Consensus 145 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~ 224 (769)
+|++++..|..|.++++|++|+|++|.+++..|..|.++++|+.|+|++|.+++..+..|.++++|+.|+|++|.+++..
T Consensus 113 ~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~ 192 (477)
T 2id5_A 113 ENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIR 192 (477)
T ss_dssp TSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEEC
T ss_pred CCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeC
Confidence 66666666666666666666666666666666666666666666666666666555555666666666666666666654
Q ss_pred C-CCCCCccCcEEeccCCcCCCCCccc---ccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCC
Q 004195 225 P-DLRNLKNLRVFDVQDNYFGPRFPRL---HKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSL 300 (769)
Q Consensus 225 p-~l~~l~~L~~l~l~~N~l~~~~p~~---~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 300 (769)
+ .+..+++|+.|++++|.+.+.+|.. ..+|+.|+|++|.++. +++..+..+++|++|+|++|.+++..+..|..+
T Consensus 193 ~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 271 (477)
T 2id5_A 193 DYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTA-VPYLAVRHLVYLRFLNLSYNPISTIEGSMLHEL 271 (477)
T ss_dssp TTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCS-CCHHHHTTCTTCCEEECCSSCCCEECTTSCTTC
T ss_pred hhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccc-cCHHHhcCccccCeeECCCCcCCccChhhcccc
Confidence 4 3666777777777777666555543 2378888999998884 535678889999999999999998878888999
Q ss_pred CCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCCh
Q 004195 301 PSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 301 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 363 (769)
++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..+..+++++.+++++|.+..
T Consensus 272 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c 334 (477)
T 2id5_A 272 LRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLAC 334 (477)
T ss_dssp TTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEEC
T ss_pred ccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccC
Confidence 999999999999999888899999999999999999998888888888889999999997754
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.7e-32 Score=313.05 Aligned_cols=260 Identities=16% Similarity=0.220 Sum_probs=231.2
Q ss_pred CCCCCccccccCCCCCCcEEEeecccccCC-----------------CCcccc--CCCcCceeeccCcccCCcCCccccC
Q 004195 98 NFSTDTFFSTLGSLSSLKVLSLVSLGLWGP-----------------LPGSIA--HSSSLEILNLSSNYLSGSIPVQISS 158 (769)
Q Consensus 98 n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~-----------------~p~~~~--~l~~L~~L~Ls~N~l~g~~p~~~~~ 158 (769)
|.+++ +|..++++++|++|+|++|.++|. +|..++ ++++|++|+|++|++.|.+|..|++
T Consensus 193 n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~ 271 (636)
T 4eco_A 193 NNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKA 271 (636)
T ss_dssp CEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTT
T ss_pred CCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhc
Confidence 44555 899999999999999999999996 999999 9999999999999999999999999
Q ss_pred CCcCCEEEcccCc-CCc-cCCccCcCC------cCCCEEeccCCCCcccCCc--cccCCCCCCEEEccCccccccCCCCC
Q 004195 159 LRNLQTLILDDNK-FTG-AVPSELSLL------QVLSVLSLKNNSLSGFLPV--SLTGLQSLRVVSLSANHLSGEIPDLR 228 (769)
Q Consensus 159 l~~L~~L~L~~N~-l~~-~~p~~~~~l------~~L~~L~L~~N~l~~~~p~--~l~~l~~L~~L~ls~N~l~~~~p~l~ 228 (769)
+++|++|+|++|+ ++| .+|..++++ ++|++|+|++|+++ .+|. .++++++|++|++++|+++|.+|.++
T Consensus 272 l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip~~~ 350 (636)
T 4eco_A 272 LPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLPAFG 350 (636)
T ss_dssp CSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECCCCE
T ss_pred CCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchhhhC
Confidence 9999999999998 999 899999887 99999999999999 8898 99999999999999999999999999
Q ss_pred CCccCcEEeccCCcCCCCCccc---ccC-CcEEEeCCccccCCcCchhhcCCC--cCcEEeccCccccccCCccCC----
Q 004195 229 NLKNLRVFDVQDNYFGPRFPRL---HKK-MVTLVLRNNRFQFGLNPDELRSYN--QLQKLDISLNRFVGPFIPSLL---- 298 (769)
Q Consensus 229 ~l~~L~~l~l~~N~l~~~~p~~---~~~-L~~L~l~~N~~~~~i~p~~~~~l~--~L~~L~Ls~N~l~~~~~~~~~---- 298 (769)
.+++|+.|++++|.++ .+|.. +.+ |+.|++++|.++ .+ |..+..++ +|++|++++|.+++.+|..+.
T Consensus 351 ~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~l-p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~ 427 (636)
T 4eco_A 351 SEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YI-PNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDP 427 (636)
T ss_dssp EEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SC-CSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCS
T ss_pred CCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-cc-chhhhhcccCccCEEECcCCcCCCcchhhhccccc
Confidence 9999999999999998 56553 456 999999999999 66 77777655 899999999999999998888
Q ss_pred ---CCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccc-c-------CCCceEECCCCCCCh
Q 004195 299 ---SLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQV-E-------AKTRLVLYSKNCLSN 363 (769)
Q Consensus 299 ---~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~-~-------~~l~~l~l~~N~l~~ 363 (769)
.+++|+.|+|++|++++..+..+..+++|+.|+|++|+++ .+|..... . ++++.+++++|.++.
T Consensus 428 ~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 502 (636)
T 4eco_A 428 TPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLTK 502 (636)
T ss_dssp SCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCCB
T ss_pred ccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCCc
Confidence 8889999999999999755556667899999999999999 56654433 2 278999999998873
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-30 Score=294.69 Aligned_cols=294 Identities=18% Similarity=0.131 Sum_probs=255.5
Q ss_pred ceEecCCCeeEEEeCCCCCCCCCCCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccC
Q 004195 70 TLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLS 149 (769)
Q Consensus 70 ~v~C~~~~v~~l~l~~~~~~~~~~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 149 (769)
.|.|...+++.+.- +........++++|.+.+..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+++
T Consensus 15 ~v~c~~~~l~~ip~-~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~ 93 (477)
T 2id5_A 15 AVLCHRKRFVAVPE-GIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLK 93 (477)
T ss_dssp EEECCSCCCSSCCS-CCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred EEEeCCCCcCcCCC-CCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCC
Confidence 57777666655431 11111112467778888888889999999999999999999999999999999999999999999
Q ss_pred CcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCC-CC
Q 004195 150 GSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LR 228 (769)
Q Consensus 150 g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~ 228 (769)
+..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|+.|+|++|++++..+. +.
T Consensus 94 ~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~ 173 (477)
T 2id5_A 94 LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALS 173 (477)
T ss_dssp SCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHT
T ss_pred ccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhc
Confidence 76667789999999999999999999999999999999999999999999999999999999999999999876654 88
Q ss_pred CCccCcEEeccCCcCCCCCccc---ccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCE
Q 004195 229 NLKNLRVFDVQDNYFGPRFPRL---HKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITY 305 (769)
Q Consensus 229 ~l~~L~~l~l~~N~l~~~~p~~---~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 305 (769)
.+++|+.|++++|.+.+..+.. +.+|+.|++++|.+.+.+ |.......+|++|+|++|++++..+..+.++++|+.
T Consensus 174 ~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~-~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 252 (477)
T 2id5_A 174 HLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTM-TPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRF 252 (477)
T ss_dssp TCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEE-CTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCE
T ss_pred ccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCcccccc-CcccccCccccEEECcCCcccccCHHHhcCccccCe
Confidence 9999999999999998765543 568999999999988777 555556669999999999999765567899999999
Q ss_pred EEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCChhh
Q 004195 306 LDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSNEE 365 (769)
Q Consensus 306 L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~~~ 365 (769)
|+|++|++++..+..+..+++|+.|+|++|++++..|..+..+++|+.+++++|.+++..
T Consensus 253 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 312 (477)
T 2id5_A 253 LNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLE 312 (477)
T ss_dssp EECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCC
T ss_pred eECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeC
Confidence 999999999998999999999999999999999999999999999999999999987643
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-31 Score=283.68 Aligned_cols=231 Identities=28% Similarity=0.359 Sum_probs=209.4
Q ss_pred CCCcEEEeecccccC--CCCccccCCCcCceeeccC-cccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCE
Q 004195 112 SSLKVLSLVSLGLWG--PLPGSIAHSSSLEILNLSS-NYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSV 188 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g--~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 188 (769)
.+++.|+|++|+++| .+|..|+++++|++|+|++ |.+.+.+|..|+++++|++|+|++|++++.+|..|.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 578999999999999 8999999999999999995 9999999999999999999999999999999999999999999
Q ss_pred EeccCCCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCc-cCcEEeccCCcCCCCCcccccCCcEEEeCCccccC
Q 004195 189 LSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLK-NLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQF 266 (769)
Q Consensus 189 L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~-~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~ 266 (769)
|+|++|.+++.+|..|.++++|++|+|++|++++.+|. +..++ +|+.|++++|.+ ++
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l---------------------~~ 188 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRL---------------------TG 188 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEE---------------------EE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCee---------------------ec
Confidence 99999999999999999999999999999999988774 66665 666665555544 44
Q ss_pred CcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCcccc
Q 004195 267 GLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQ 346 (769)
Q Consensus 267 ~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~ 346 (769)
.+ |..+..++ |++|+|++|.+++.+|..+..+++|+.|+|++|++++.+|. +..+++|+.|+|++|++++.+|..+.
T Consensus 189 ~~-~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~ 265 (313)
T 1ogq_A 189 KI-PPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLT 265 (313)
T ss_dssp EC-CGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGG
T ss_pred cC-ChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHh
Confidence 44 77777887 99999999999999999999999999999999999987776 78899999999999999999999999
Q ss_pred ccCCCceEECCCCCCChhhh
Q 004195 347 VEAKTRLVLYSKNCLSNEEQ 366 (769)
Q Consensus 347 ~~~~l~~l~l~~N~l~~~~~ 366 (769)
.+++++.+++++|.++|..|
T Consensus 266 ~l~~L~~L~Ls~N~l~~~ip 285 (313)
T 1ogq_A 266 QLKFLHSLNVSFNNLCGEIP 285 (313)
T ss_dssp GCTTCCEEECCSSEEEEECC
T ss_pred cCcCCCEEECcCCcccccCC
Confidence 99999999999999987654
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=301.19 Aligned_cols=261 Identities=19% Similarity=0.186 Sum_probs=213.0
Q ss_pred CCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccC
Q 004195 97 HNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAV 176 (769)
Q Consensus 97 ~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~ 176 (769)
++.+....+..+.++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..
T Consensus 60 ~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~ 139 (597)
T 3oja_B 60 NSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLP 139 (597)
T ss_dssp SCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCC
Confidence 33333344455778889999999999998888888999999999999999998888888889999999999999988666
Q ss_pred CccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCcc-------------------CcEEe
Q 004195 177 PSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKN-------------------LRVFD 237 (769)
Q Consensus 177 p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~-------------------L~~l~ 237 (769)
+..|+++++|++|+|++|.+++..|..|+++++|+.|+|++|.+++.. ++.+++ |+.|+
T Consensus 140 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ 217 (597)
T 3oja_B 140 RGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYNLLSTLAIPIAVEELD 217 (597)
T ss_dssp TTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC--GGGCTTCSEEECCSSCCSEEECCTTCSEEE
T ss_pred HHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC--hhhhhhhhhhhcccCccccccCCchhheee
Confidence 666788999999999999998888888889999999999999887642 333444 45555
Q ss_pred ccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccc
Q 004195 238 VQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLL 317 (769)
Q Consensus 238 l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 317 (769)
+++|.+....+....+|..|+|++|.+++ +..+..+++|+.|+|++|.+.+..|..|.++++|+.|+|++|.+++ +
T Consensus 218 ls~n~l~~~~~~~~~~L~~L~L~~n~l~~---~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l 293 (597)
T 3oja_B 218 ASHNSINVVRGPVNVELTILKLQHNNLTD---TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-L 293 (597)
T ss_dssp CCSSCCCEEECSCCSCCCEEECCSSCCCC---CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-E
T ss_pred ccCCcccccccccCCCCCEEECCCCCCCC---ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-C
Confidence 55555544333445678899999999885 5788999999999999999999889999999999999999999988 4
Q ss_pred cccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCChh
Q 004195 318 LQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSNE 364 (769)
Q Consensus 318 ~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~~ 364 (769)
|..+..+++|+.|+|++|.++ .+|..+..+++++.|++++|.+++.
T Consensus 294 ~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~ 339 (597)
T 3oja_B 294 NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL 339 (597)
T ss_dssp ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC
T ss_pred CcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc
Confidence 666778899999999999998 5777788889999999999998754
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-30 Score=300.78 Aligned_cols=289 Identities=21% Similarity=0.146 Sum_probs=206.3
Q ss_pred CeeEEEeCCCCCCCCC------------CCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeecc
Q 004195 77 NLTQLHIAGDNNNNIN------------GGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLS 144 (769)
Q Consensus 77 ~v~~l~l~~~~~~~~~------------~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls 144 (769)
+++.|+++++.+.... .++++|.+.+..|..|+++++|++|+|++|.+++..|..|+++++|++|+|+
T Consensus 33 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~ 112 (606)
T 3vq2_A 33 STKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAV 112 (606)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECT
T ss_pred CcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEcc
Confidence 5788888887654321 2345566666667778888888888888888888778888888888888888
Q ss_pred CcccCCcCCccccCCCcCCEEEcccCcCCc-cCCccCcCCcCCCEEeccCCCCcccCCcccc------------------
Q 004195 145 SNYLSGSIPVQISSLRNLQTLILDDNKFTG-AVPSELSLLQVLSVLSLKNNSLSGFLPVSLT------------------ 205 (769)
Q Consensus 145 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~------------------ 205 (769)
+|.+++..|..|+++++|++|+|++|.+++ .+|..|+++++|++|+|++|++++..|..|+
T Consensus 113 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~ 192 (606)
T 3vq2_A 113 ETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNP 192 (606)
T ss_dssp TSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCC
T ss_pred CCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCC
Confidence 888887666778888888888888888875 5688888888888888888877665443221
Q ss_pred --------------------------------------------------------------------------------
Q 004195 206 -------------------------------------------------------------------------------- 205 (769)
Q Consensus 206 -------------------------------------------------------------------------------- 205 (769)
T Consensus 193 l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~ 272 (606)
T 3vq2_A 193 IDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTN 272 (606)
T ss_dssp CCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCT
T ss_pred cceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccc
Confidence
Q ss_pred ---------------------------------------------------------------------------CCCCC
Q 004195 206 ---------------------------------------------------------------------------GLQSL 210 (769)
Q Consensus 206 ---------------------------------------------------------------------------~l~~L 210 (769)
.+++|
T Consensus 273 ~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~L 352 (606)
T 3vq2_A 273 DFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVALPSL 352 (606)
T ss_dssp TCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESCSSCEECCCCCCTTC
T ss_pred cccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccCcccccCCCCccceeeccCCcCccchhhccCCCC
Confidence 12233
Q ss_pred CEEEccCccccccC--C-CCCCCccCcEEeccCCcCCCCCcc--cccCCcEEEeCCccccCCcCchhhcCCCcCcEEecc
Q 004195 211 RVVSLSANHLSGEI--P-DLRNLKNLRVFDVQDNYFGPRFPR--LHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDIS 285 (769)
Q Consensus 211 ~~L~ls~N~l~~~~--p-~l~~l~~L~~l~l~~N~l~~~~p~--~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls 285 (769)
++|++++|++++.. | .+..+++|+.|++++|.+.+.... .+++|+.|++++|.+.+......+..+++|++|+++
T Consensus 353 ~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~ 432 (606)
T 3vq2_A 353 SYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDIS 432 (606)
T ss_dssp CEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECT
T ss_pred CEEECcCCccCCCcchhhhhccCCcccEeECCCCccccchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECc
Confidence 33333333333321 1 134556777788888877653322 246778888888888765522577778888888888
Q ss_pred CccccccCCccCCCCCCCCEEEccCCcCCc-cccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCChh
Q 004195 286 LNRFVGPFIPSLLSLPSITYLDIHGNKLTG-LLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSNE 364 (769)
Q Consensus 286 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~~ 364 (769)
+|.+.+..|..+.++++|+.|++++|++++ .+|..+..+++|+.|++++|++++.+|..+..+++++.+++++|.+++.
T Consensus 433 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 512 (606)
T 3vq2_A 433 YTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFL 512 (606)
T ss_dssp TSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCE
T ss_pred CCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCc
Confidence 888887777778888888888888888877 4677777788888888888888877777777777888888888877765
Q ss_pred h
Q 004195 365 E 365 (769)
Q Consensus 365 ~ 365 (769)
.
T Consensus 513 ~ 513 (606)
T 3vq2_A 513 D 513 (606)
T ss_dssp E
T ss_pred C
Confidence 3
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.8e-30 Score=300.47 Aligned_cols=173 Identities=21% Similarity=0.201 Sum_probs=106.5
Q ss_pred CCCCCCCCCC--CCCCCCCCCCCcceEecCCCeeEEEeCCCCCCCCCCCCCCCCCCCccccccCCCCCCcEEEeeccccc
Q 004195 48 VSSSFNTTTV--TDFCNIEPTPSLTLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLW 125 (769)
Q Consensus 48 ~l~~w~~~~~--~~~c~~~~~~~~~v~C~~~~v~~l~l~~~~~~~~~~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~ 125 (769)
.+++|+.+.. .++|.+.. +...|.|...+++++.- +.+......+|++|.++.+.+.+|.++++|++|+|++|+++
T Consensus 12 ~~~~~~~~~p~~~~~c~~~~-~~~~~~c~~~~l~~vP~-~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~ 89 (635)
T 4g8a_A 12 KLAAANSSIPESWEPCVEVV-PNITYQCMELNFYKIPD-NLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ 89 (635)
T ss_dssp -------------CCSEEEE-TTTEEECTTSCCSSCCS-SSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred hhhcccCCCCCCCCCccccC-CCCEEECCCCCcCccCC-CCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCC
Confidence 5667765421 13454321 22357887544433210 00101111344555555555667777888888888888877
Q ss_pred CCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcc-cCCccc
Q 004195 126 GPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSG-FLPVSL 204 (769)
Q Consensus 126 g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l 204 (769)
+..|++|.+|++|++|+|++|+|++..|..|.+|++|++|+|++|++++..+..|+++++|++|+|++|.+++ .+|..+
T Consensus 90 ~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~ 169 (635)
T 4g8a_A 90 TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYF 169 (635)
T ss_dssp EECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGG
T ss_pred CcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhh
Confidence 7767777788888888888888776666677778888888888888776666677778888888888887765 356677
Q ss_pred cCCCCCCEEEccCccccc
Q 004195 205 TGLQSLRVVSLSANHLSG 222 (769)
Q Consensus 205 ~~l~~L~~L~ls~N~l~~ 222 (769)
+++++|++|+|++|++++
T Consensus 170 ~~l~~L~~L~L~~N~l~~ 187 (635)
T 4g8a_A 170 SNLTNLEHLDLSSNKIQS 187 (635)
T ss_dssp GGCTTCCEEECCSSCCCE
T ss_pred ccchhhhhhcccCccccc
Confidence 777777777777776643
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5e-30 Score=298.04 Aligned_cols=257 Identities=23% Similarity=0.256 Sum_probs=130.6
Q ss_pred cccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCcc-ccCCCcCCEEEcccCcCCccC--CccC
Q 004195 104 FFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQ-ISSLRNLQTLILDDNKFTGAV--PSEL 180 (769)
Q Consensus 104 ~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~~L~L~~N~l~~~~--p~~~ 180 (769)
+|..+.++++|++|+|++|.+++..|..+.++++|++|++++|.+.+.+|.. +.++++|++|+|++|.+++.. |..+
T Consensus 293 lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 372 (606)
T 3t6q_A 293 LPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQL 372 (606)
T ss_dssp CCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTT
T ss_pred CChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhc
Confidence 3444455555555555555554444445555555555555555554444332 455555555555555554433 4445
Q ss_pred cCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCC--CCCCccCcEEeccCCcCCCCCccc---ccCCc
Q 004195 181 SLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD--LRNLKNLRVFDVQDNYFGPRFPRL---HKKMV 255 (769)
Q Consensus 181 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~--l~~l~~L~~l~l~~N~l~~~~p~~---~~~L~ 255 (769)
..+++|++|+|++|.+++..|..|.++++|+.|++++|++++..+. +..+++|+.|++++|.+++..|.. +++|+
T Consensus 373 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 452 (606)
T 3t6q_A 373 RNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQ 452 (606)
T ss_dssp TTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCC
T ss_pred ccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCC
Confidence 5555555555555555555555555555555555555555544332 445555555555555555444432 24455
Q ss_pred EEEeCCccccCCc--CchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEcc
Q 004195 256 TLVLRNNRFQFGL--NPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLS 333 (769)
Q Consensus 256 ~L~l~~N~~~~~i--~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~ 333 (769)
+|++++|.+++.. .+..+..+++|++|+|++|.+++..|..|..+++|+.|+|++|++++..|..+..++.| .|+++
T Consensus 453 ~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~ 531 (606)
T 3t6q_A 453 HLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLA 531 (606)
T ss_dssp EEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECC
T ss_pred EEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECc
Confidence 5555555554311 12345555555555555555555555555555555555555555555555555555555 55555
Q ss_pred CCcCCCCCCccccccCCCceEECCCCCC
Q 004195 334 SNLLTGYLPSCLQVEAKTRLVLYSKNCL 361 (769)
Q Consensus 334 ~N~l~g~~p~~~~~~~~l~~l~l~~N~l 361 (769)
+|++++.+|..+..+++++.+++++|.+
T Consensus 532 ~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 559 (606)
T 3t6q_A 532 SNHISIILPSLLPILSQQRTINLRQNPL 559 (606)
T ss_dssp SSCCCCCCGGGHHHHHTSSEEECTTCCE
T ss_pred CCcccccCHhhcccCCCCCEEeCCCCCc
Confidence 5555555555555555555555555544
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.1e-30 Score=304.77 Aligned_cols=249 Identities=18% Similarity=0.217 Sum_probs=144.5
Q ss_pred CCccccccCCCCCCcEEEeeccc-ccC-CCCccccCCC-------cCceeeccCcccCCcCCc--cccCCCcCCEEEccc
Q 004195 101 TDTFFSTLGSLSSLKVLSLVSLG-LWG-PLPGSIAHSS-------SLEILNLSSNYLSGSIPV--QISSLRNLQTLILDD 169 (769)
Q Consensus 101 ~~~~~~~~~~l~~L~~L~L~~n~-l~g-~~p~~~~~l~-------~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~L~L~~ 169 (769)
.+.+|..|++|++|+.|+|++|+ ++| .+|..+++++ +|++|+|++|+++ .+|. .|+++++|++|+|++
T Consensus 504 ~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~ 582 (876)
T 4ecn_A 504 MTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVH 582 (876)
T ss_dssp CCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTT
T ss_pred CccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCC
Confidence 34444444444444444444444 444 4444433333 4444444444444 4444 455555555555555
Q ss_pred CcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCC-CCEEEccCccccccCCC-CCCCc--cCcEEeccCCcCCC
Q 004195 170 NKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQS-LRVVSLSANHLSGEIPD-LRNLK--NLRVFDVQDNYFGP 245 (769)
Q Consensus 170 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~-L~~L~ls~N~l~~~~p~-l~~l~--~L~~l~l~~N~l~~ 245 (769)
|+++ .+| .|+++++|+.|+|++|+++ .+|..+.++++ |+.|+|++|+++ .+|. +..++ +|+.|++++|.+.+
T Consensus 583 N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g 658 (876)
T 4ecn_A 583 NKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGS 658 (876)
T ss_dssp SCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTT
T ss_pred CCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCC
Confidence 5555 444 5555555555555555555 45555555555 555555555555 2332 33332 25666666666655
Q ss_pred CCcccc--------cCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCC--------CCCCEEEcc
Q 004195 246 RFPRLH--------KKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSL--------PSITYLDIH 309 (769)
Q Consensus 246 ~~p~~~--------~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l--------~~L~~L~l~ 309 (769)
.+|... .+|+.|+|++|.++ .+++..+..+++|+.|+|++|+++ .+|..+... ++|+.|+|+
T Consensus 659 ~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls 736 (876)
T 4ecn_A 659 EGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLR 736 (876)
T ss_dssp TSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECC
T ss_pred ccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECC
Confidence 544321 25667777777776 452333447788888888888887 455543332 278888888
Q ss_pred CCcCCccccccCC--CCCCCcEEEccCCcCCCCCCccccccCCCceEECCC
Q 004195 310 GNKLTGLLLQNMS--CNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSK 358 (769)
Q Consensus 310 ~N~l~~~~~~~~~--~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~ 358 (769)
+|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|++++
T Consensus 737 ~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~ 785 (876)
T 4ecn_A 737 FNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRH 785 (876)
T ss_dssp SSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCC
T ss_pred CCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCC
Confidence 88887 4666665 77888888888888887 677777777788887766
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.1e-30 Score=308.61 Aligned_cols=287 Identities=19% Similarity=0.199 Sum_probs=180.5
Q ss_pred CCeeEEEeCCCCCCCCC------------CCCCCCCCCCcc-ccccCCCCCCcEEEeecccccCCCCccccCCCcCceee
Q 004195 76 DNLTQLHIAGDNNNNIN------------GGLAHNFSTDTF-FSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILN 142 (769)
Q Consensus 76 ~~v~~l~l~~~~~~~~~------------~~l~~n~~~~~~-~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~ 142 (769)
.+++.|++++|.+.... .++++|...+.+ |..|.++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 24 ~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 103 (844)
T 3j0a_A 24 NTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELR 103 (844)
T ss_dssp TTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEE
T ss_pred CCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEee
Confidence 46777777766544321 112223222222 44555555555555555555555555555555555555
Q ss_pred ccCcccCCcCCcc--ccCCCcCCEEEcccCcCCccCC-ccCcCCcCCCEEeccCCCCcccCCccccCC--CCCCEEEccC
Q 004195 143 LSSNYLSGSIPVQ--ISSLRNLQTLILDDNKFTGAVP-SELSLLQVLSVLSLKNNSLSGFLPVSLTGL--QSLRVVSLSA 217 (769)
Q Consensus 143 Ls~N~l~g~~p~~--~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l--~~L~~L~ls~ 217 (769)
|++|.+++.+|.. |++|++|++|+|++|.+++..| ..|+++++|++|+|++|.+++..|..+..+ ++|+.|+++.
T Consensus 104 Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~ 183 (844)
T 3j0a_A 104 LYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAA 183 (844)
T ss_dssp CTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECC
T ss_pred CcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCC
Confidence 5555555544443 5555555555555555554433 345555555555555555555555555554 5555555555
Q ss_pred ccccccCCC-CCCCcc------CcEEeccCCcCCCCCccc----------------------------------------
Q 004195 218 NHLSGEIPD-LRNLKN------LRVFDVQDNYFGPRFPRL---------------------------------------- 250 (769)
Q Consensus 218 N~l~~~~p~-l~~l~~------L~~l~l~~N~l~~~~p~~---------------------------------------- 250 (769)
|.+++..|. ++.+.+ |+.|++++|.+++..+..
T Consensus 184 n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l 263 (844)
T 3j0a_A 184 NSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGL 263 (844)
T ss_dssp SBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTT
T ss_pred CccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhcc
Confidence 555554432 333333 777788777666544321
Q ss_pred -ccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcE
Q 004195 251 -HKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAF 329 (769)
Q Consensus 251 -~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 329 (769)
..+|+.|+|++|.+.+.. |..+..+++|+.|+|++|++.+..|..|.++++|+.|+|++|++++..+..+..+++|+.
T Consensus 264 ~~~~L~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 342 (844)
T 3j0a_A 264 ARSSVRHLDLSHGFVFSLN-SRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAY 342 (844)
T ss_dssp TTSCCCEEECTTCCCCEEC-SCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCE
T ss_pred ccCCccEEECCCCcccccC-hhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCE
Confidence 135777788888777543 677778888888888888888777777888888888888888888777778888888888
Q ss_pred EEccCCcCCCCCCccccccCCCceEECCCCCCCh
Q 004195 330 VDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 330 l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 363 (769)
|++++|++++..+..+..+++++.+++++|.+++
T Consensus 343 L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~ 376 (844)
T 3j0a_A 343 IDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT 376 (844)
T ss_dssp EECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC
T ss_pred EECCCCCCCccChhhhcCCCCCCEEECCCCCCCc
Confidence 8888888887777777777888888888887764
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.3e-30 Score=279.41 Aligned_cols=251 Identities=20% Similarity=0.219 Sum_probs=195.8
Q ss_pred cccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcC
Q 004195 106 STLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQV 185 (769)
Q Consensus 106 ~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 185 (769)
..+.++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|+|++|+++...+..|.++++
T Consensus 63 ~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~ 142 (390)
T 3o6n_A 63 ALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPK 142 (390)
T ss_dssp HHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred hHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCC
Confidence 34677888888888888888777778888888888888888888777777888888888888888888544455688888
Q ss_pred CCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCcc-------------------CcEEeccCCcCCCC
Q 004195 186 LSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKN-------------------LRVFDVQDNYFGPR 246 (769)
Q Consensus 186 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~-------------------L~~l~l~~N~l~~~ 246 (769)
|++|+|++|.+++..|..|.++++|++|++++|++++. .+..+++ |+.|++++|.+...
T Consensus 143 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~ 220 (390)
T 3o6n_A 143 LTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV--DLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVV 220 (390)
T ss_dssp CCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC--CGGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEE
T ss_pred CcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc--ccccccccceeecccccccccCCCCcceEEECCCCeeeec
Confidence 88888888888887778888888888888888888754 2333444 45555555555443
Q ss_pred CcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCC
Q 004195 247 FPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQ 326 (769)
Q Consensus 247 ~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 326 (769)
......+|+.|++++|.+++ +..+..+++|++|+|++|.+.+..|..|..+++|+.|+|++|++++. |..+..+++
T Consensus 221 ~~~~~~~L~~L~l~~n~l~~---~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~l~~ 296 (390)
T 3o6n_A 221 RGPVNVELTILKLQHNNLTD---TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVAL-NLYGQPIPT 296 (390)
T ss_dssp ECCCCSSCCEEECCSSCCCC---CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEE-ECSSSCCTT
T ss_pred cccccccccEEECCCCCCcc---cHHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCccc-CcccCCCCC
Confidence 33334678888888888875 35788888899999999988888888888888999999999988874 556677888
Q ss_pred CcEEEccCCcCCCCCCccccccCCCceEECCCCCCCh
Q 004195 327 LAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 327 L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 363 (769)
|+.|+|++|+++ .+|..+..+++++.+++++|.++.
T Consensus 297 L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~ 332 (390)
T 3o6n_A 297 LKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVT 332 (390)
T ss_dssp CCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCC
T ss_pred CCEEECCCCcce-ecCccccccCcCCEEECCCCccce
Confidence 999999999888 456667778888888888888764
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.9e-30 Score=306.91 Aligned_cols=293 Identities=21% Similarity=0.173 Sum_probs=250.8
Q ss_pred ceEecCCCeeEEEeCCCCCCCCCCCCCCCCCCCccccccCCCCCCcEEEeecccccCCC-CccccCCCcCceeeccCccc
Q 004195 70 TLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPL-PGSIAHSSSLEILNLSSNYL 148 (769)
Q Consensus 70 ~v~C~~~~v~~l~l~~~~~~~~~~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~-p~~~~~l~~L~~L~Ls~N~l 148 (769)
.+.|...+++.+.- ..-.....++++|.+.+..+..|.++++|++|+|++|.+.+.+ |..|+++++|++|+|++|++
T Consensus 8 ~~dcs~~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l 85 (844)
T 3j0a_A 8 IAFYRFCNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKI 85 (844)
T ss_dssp EEEESCCCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCC
T ss_pred EEEccCCCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcC
Confidence 47787666666542 1111123567888888888999999999999999999777766 78899999999999999999
Q ss_pred CCcCCccccCCCcCCEEEcccCcCCccCCcc--CcCCcCCCEEeccCCCCcccCC-ccccCCCCCCEEEccCccccccCC
Q 004195 149 SGSIPVQISSLRNLQTLILDDNKFTGAVPSE--LSLLQVLSVLSLKNNSLSGFLP-VSLTGLQSLRVVSLSANHLSGEIP 225 (769)
Q Consensus 149 ~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~ls~N~l~~~~p 225 (769)
++..|..|++|++|++|+|++|.+++.+|.. |+++++|++|+|++|.+++..+ ..|+++++|++|+|++|.+++..+
T Consensus 86 ~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~ 165 (844)
T 3j0a_A 86 YFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCE 165 (844)
T ss_dssp CEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCS
T ss_pred cccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCH
Confidence 9999999999999999999999999877765 9999999999999999998765 689999999999999999998776
Q ss_pred C-CCCC--ccCcEEeccCCcCCCCCcccc---------cCCcEEEeCCccccCCcCchhhcC------------------
Q 004195 226 D-LRNL--KNLRVFDVQDNYFGPRFPRLH---------KKMVTLVLRNNRFQFGLNPDELRS------------------ 275 (769)
Q Consensus 226 ~-l~~l--~~L~~l~l~~N~l~~~~p~~~---------~~L~~L~l~~N~~~~~i~p~~~~~------------------ 275 (769)
. +..+ ++|+.|+++.|.+.+..|... ..|+.|++++|.+++.+ +..+..
T Consensus 166 ~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~-~~~~~~~l~~~~l~~L~l~~~~~~ 244 (844)
T 3j0a_A 166 HELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDI-TGNFSNAISKSQAFSLILAHHIMG 244 (844)
T ss_dssp GGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTT-TSGGGGTSCSCCBSEEECCSSCCB
T ss_pred HHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhH-HHHHHhhcCcccccceeccccccc
Confidence 4 6666 899999999999998776532 13899999999887654 333221
Q ss_pred --------------------CCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCC
Q 004195 276 --------------------YNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSN 335 (769)
Q Consensus 276 --------------------l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N 335 (769)
.++|+.|+|++|.+.+..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|
T Consensus 245 ~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N 324 (844)
T 3j0a_A 245 AGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYN 324 (844)
T ss_dssp CSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESC
T ss_pred ccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCC
Confidence 268999999999999988999999999999999999999999999999999999999999
Q ss_pred cCCCCCCccccccCCCceEECCCCCCChhh
Q 004195 336 LLTGYLPSCLQVEAKTRLVLYSKNCLSNEE 365 (769)
Q Consensus 336 ~l~g~~p~~~~~~~~l~~l~l~~N~l~~~~ 365 (769)
.+++..|..+..+++++.+++++|.+++..
T Consensus 325 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~ 354 (844)
T 3j0a_A 325 LLGELYSSNFYGLPKVAYIDLQKNHIAIIQ 354 (844)
T ss_dssp CCSCCCSCSCSSCTTCCEEECCSCCCCCCC
T ss_pred CCCccCHHHhcCCCCCCEEECCCCCCCccC
Confidence 999999999999999999999999987643
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-29 Score=292.67 Aligned_cols=267 Identities=20% Similarity=0.193 Sum_probs=220.7
Q ss_pred CCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCc
Q 004195 95 LAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTG 174 (769)
Q Consensus 95 l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~ 174 (769)
+.+|.+.+..+..|+++++|+.|+|++|.++ .+|..+.++++|++|+|++|.+++..|..+.++++|++|+|++|.+.+
T Consensus 261 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~ 339 (606)
T 3t6q_A 261 LQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRL 339 (606)
T ss_dssp CTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCC
T ss_pred eecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCccc
Confidence 3445555666667888888999999988886 678888888899999999998888778888888899999999988887
Q ss_pred cCCcc-CcCCcCCCEEeccCCCCcccC--CccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCCCccc
Q 004195 175 AVPSE-LSLLQVLSVLSLKNNSLSGFL--PVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRL 250 (769)
Q Consensus 175 ~~p~~-~~~l~~L~~L~L~~N~l~~~~--p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p~~ 250 (769)
.+|.. +..+++|++|+|++|.+++.. |..+.++++|++|++++|++++..|. +..+++|+.|++++|.+.+..+..
T Consensus 340 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 419 (606)
T 3t6q_A 340 ELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQS 419 (606)
T ss_dssp BCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCC
T ss_pred ccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccch
Confidence 77654 888889999999999888765 77888888999999999988887664 778888999999998887765532
Q ss_pred ----ccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCcccccc---CCccCCCCCCCCEEEccCCcCCccccccCCC
Q 004195 251 ----HKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGP---FIPSLLSLPSITYLDIHGNKLTGLLLQNMSC 323 (769)
Q Consensus 251 ----~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~---~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 323 (769)
+++|+.|++++|.+++.. |..+..+++|++|++++|.+.+. .+..+..+++|+.|++++|++++..|..+..
T Consensus 420 ~~~~l~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 498 (606)
T 3t6q_A 420 PFQNLHLLKVLNLSHSLLDISS-EQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTS 498 (606)
T ss_dssp TTTTCTTCCEEECTTCCCBTTC-TTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTT
T ss_pred hhhCcccCCEEECCCCccCCcC-HHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhcc
Confidence 467888999999888654 77888888999999999988773 2355788888999999999998888888888
Q ss_pred CCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCChh
Q 004195 324 NPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSNE 364 (769)
Q Consensus 324 l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~~ 364 (769)
+++|+.|+|++|++++..|..+..++.+ .+++++|.+++.
T Consensus 499 l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~ 538 (606)
T 3t6q_A 499 LKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISII 538 (606)
T ss_dssp CTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCC
T ss_pred ccCCCEEECCCCccCcCChhHhCccccc-EEECcCCccccc
Confidence 8999999999999988888888888888 888898888754
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-29 Score=296.76 Aligned_cols=265 Identities=19% Similarity=0.154 Sum_probs=164.5
Q ss_pred CCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCC
Q 004195 98 NFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVP 177 (769)
Q Consensus 98 n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p 177 (769)
|.+.+..+..|.++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|+++++|++|+|++|++++..|
T Consensus 35 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~ 114 (680)
T 1ziw_A 35 NQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKN 114 (680)
T ss_dssp SCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCS
T ss_pred CCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccCh
Confidence 33444445567777777777777777777777777777777777777777775444457777777777777777776666
Q ss_pred ccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCC---CCCCccCcEEeccCCcCCCCCcccc---
Q 004195 178 SELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD---LRNLKNLRVFDVQDNYFGPRFPRLH--- 251 (769)
Q Consensus 178 ~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~---l~~l~~L~~l~l~~N~l~~~~p~~~--- 251 (769)
..|+++++|++|+|++|.+++..|..++++++|++|++++|++++..+. ...+++|+.|++++|.+++..|..+
T Consensus 115 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l 194 (680)
T 1ziw_A 115 NPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAI 194 (680)
T ss_dssp CTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGS
T ss_pred hHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhh
Confidence 6777777777777777777776677777777777777777777665543 2344667777777776665544311
Q ss_pred ---------------------------cCCcEEEeCCccccCCcCchhhcCCCc--CcEEeccCccccccCCccCCCCCC
Q 004195 252 ---------------------------KKMVTLVLRNNRFQFGLNPDELRSYNQ--LQKLDISLNRFVGPFIPSLLSLPS 302 (769)
Q Consensus 252 ---------------------------~~L~~L~l~~N~~~~~i~p~~~~~l~~--L~~L~Ls~N~l~~~~~~~~~~l~~ 302 (769)
.+|+.|++++|.+++.. |..+..++. |++|+|++|++++..|..|..+++
T Consensus 195 ~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~-~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 273 (680)
T 1ziw_A 195 GRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTS-NTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQ 273 (680)
T ss_dssp SEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEEC-TTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTT
T ss_pred hhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccC-hhHhhccCcCCCCEEECCCCCcCccCcccccCccc
Confidence 34556666666665433 555555543 666666666666655566666666
Q ss_pred CCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCC-----CCCc----cccccCCCceEECCCCCCCh
Q 004195 303 ITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTG-----YLPS----CLQVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 303 L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g-----~~p~----~~~~~~~l~~l~l~~N~l~~ 363 (769)
|+.|++++|++++..|..+..+++|+.|++++|...+ .+|. .+..+++++.+++++|.+++
T Consensus 274 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~ 343 (680)
T 1ziw_A 274 LEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPG 343 (680)
T ss_dssp CCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCC
T ss_pred ccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCC
Confidence 6666666666666655555555555555555444332 1222 33344445555555554443
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.4e-29 Score=264.56 Aligned_cols=246 Identities=21% Similarity=0.239 Sum_probs=216.5
Q ss_pred CCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEec
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL 191 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 191 (769)
+.|++|+|++|++++..+..|+++++|++|+|++|++++..|..|+++++|++|+|++|+++ .+|..+. ++|++|++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l 128 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRV 128 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEEC
Confidence 57899999999999888889999999999999999999888999999999999999999998 6776665 79999999
Q ss_pred cCCCCcccCCccccCCCCCCEEEccCccccc--cCC-CCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCc
Q 004195 192 KNNSLSGFLPVSLTGLQSLRVVSLSANHLSG--EIP-DLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGL 268 (769)
Q Consensus 192 ~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~--~~p-~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i 268 (769)
++|.+++..+..|.++++|+.|++++|.++. ..+ .+..+++|+.|++++|.++........+|+.|++++|.+++..
T Consensus 129 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~l~~~~ 208 (330)
T 1xku_A 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVD 208 (330)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCCTTCSEEECTTSCCCEEC
T ss_pred CCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCccccccCCEEECCCCcCCccC
Confidence 9999998888889999999999999999964 444 3788999999999999998655455688999999999998644
Q ss_pred CchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCcccccc
Q 004195 269 NPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVE 348 (769)
Q Consensus 269 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~ 348 (769)
|..+..+++|++|+|++|.+++..+..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|++++..+..+...
T Consensus 209 -~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~ 286 (330)
T 1xku_A 209 -AASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPP 286 (330)
T ss_dssp -TGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCS
T ss_pred -HHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCc
Confidence 889999999999999999999988888999999999999999998 577888999999999999999998877766432
Q ss_pred ------CCCceEECCCCCCC
Q 004195 349 ------AKTRLVLYSKNCLS 362 (769)
Q Consensus 349 ------~~l~~l~l~~N~l~ 362 (769)
..+..+++++|.+.
T Consensus 287 ~~~~~~~~l~~l~l~~N~~~ 306 (330)
T 1xku_A 287 GYNTKKASYSGVSLFSNPVQ 306 (330)
T ss_dssp SCCTTSCCCSEEECCSSSSC
T ss_pred ccccccccccceEeecCccc
Confidence 56778899999875
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-29 Score=269.54 Aligned_cols=227 Identities=22% Similarity=0.259 Sum_probs=204.1
Q ss_pred cCCCeeEEEeCCCCCCCCCCCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCC
Q 004195 74 YEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIP 153 (769)
Q Consensus 74 ~~~~v~~l~l~~~~~~~~~~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p 153 (769)
...+|+.|++.++.+. .+|..++++++|++|+|++|.++ .+|..|+++++|++|+|++|.++ .+|
T Consensus 79 ~~~~l~~L~L~~n~l~-------------~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp 143 (328)
T 4fcg_A 79 TQPGRVALELRSVPLP-------------QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALP 143 (328)
T ss_dssp TSTTCCEEEEESSCCS-------------SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCC
T ss_pred cccceeEEEccCCCch-------------hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCc
Confidence 3468999999887654 34567888999999999999998 89999999999999999999999 789
Q ss_pred ccccCCCcCCEEEcccCcCCccCCccCcC---------CcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccC
Q 004195 154 VQISSLRNLQTLILDDNKFTGAVPSELSL---------LQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEI 224 (769)
Q Consensus 154 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~---------l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~ 224 (769)
..|+++++|++|+|++|++.+.+|..++. +++|++|+|++|.++ .+|..++++++|++|+|++|++++.+
T Consensus 144 ~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~ 222 (328)
T 4fcg_A 144 ASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALG 222 (328)
T ss_dssp GGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCC
T ss_pred HHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCc
Confidence 99999999999999999999999988765 999999999999999 78999999999999999999999877
Q ss_pred CCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCC
Q 004195 225 PDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSIT 304 (769)
Q Consensus 225 p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 304 (769)
+.+..+++|+.|++++|.+.+ .+ |..+..+++|++|+|++|++.+.+|..+.++++|+
T Consensus 223 ~~l~~l~~L~~L~Ls~n~~~~---------------------~~-p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~ 280 (328)
T 4fcg_A 223 PAIHHLPKLEELDLRGCTALR---------------------NY-PPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLE 280 (328)
T ss_dssp GGGGGCTTCCEEECTTCTTCC---------------------BC-CCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCC
T ss_pred hhhccCCCCCEEECcCCcchh---------------------hh-HHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCC
Confidence 778888888888887776653 33 66788899999999999999999999999999999
Q ss_pred EEEccCCcCCccccccCCCCCCCcEEEccCCcCC
Q 004195 305 YLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLT 338 (769)
Q Consensus 305 ~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~ 338 (769)
.|+|++|++.+.+|..++.+++|+.+++..|.+.
T Consensus 281 ~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 281 KLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp EEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred EEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 9999999999999999999999999999987765
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.4e-29 Score=288.14 Aligned_cols=302 Identities=20% Similarity=0.188 Sum_probs=238.5
Q ss_pred CCCCCCCCCCcceEecCCCeeEEEeCCCCCCCCCCCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcC
Q 004195 59 DFCNIEPTPSLTLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSL 138 (769)
Q Consensus 59 ~~c~~~~~~~~~v~C~~~~v~~l~l~~~~~~~~~~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L 138 (769)
++|.+.. ....|.|.+.+++.+.-. ..-.....++++|.+.+..+..|.++++|++|+|++|.+++..|..|+++++|
T Consensus 5 ~~c~~~~-~~~~~~c~~~~l~~ip~~-~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L 82 (606)
T 3vq2_A 5 NPCIEVV-PNITYQCMDQKLSKVPDD-IPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHL 82 (606)
T ss_dssp -CCEEEE-TTTEEECTTSCCSSCCTT-SCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTC
T ss_pred CCceecC-CCCceEccCCCcccCCCC-CCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhc
Confidence 5576521 223578876666665421 11111124677888888888899999999999999999999999999999999
Q ss_pred ceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcc-cCCccccCCCCCCEEEccC
Q 004195 139 EILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSG-FLPVSLTGLQSLRVVSLSA 217 (769)
Q Consensus 139 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~ls~ 217 (769)
++|+|++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|.+++ .+|..|+++++|++|++++
T Consensus 83 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~ 162 (606)
T 3vq2_A 83 SNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSY 162 (606)
T ss_dssp CEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCS
T ss_pred CEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccC
Confidence 999999999999889999999999999999999998888899999999999999999986 6799999999999999999
Q ss_pred ccccccCCC-CCCCc---------------------------cCcEEecc------------------------------
Q 004195 218 NHLSGEIPD-LRNLK---------------------------NLRVFDVQ------------------------------ 239 (769)
Q Consensus 218 N~l~~~~p~-l~~l~---------------------------~L~~l~l~------------------------------ 239 (769)
|++++..|. ++.++ +|+.|+++
T Consensus 163 n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~ 242 (606)
T 3vq2_A 163 NYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFK 242 (606)
T ss_dssp SCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCT
T ss_pred CcceecChhhhhhhhccccccceeeccCCCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccc
Confidence 998775442 11111 22222222
Q ss_pred -------------------------------------------------------------------------CCcCCCC
Q 004195 240 -------------------------------------------------------------------------DNYFGPR 246 (769)
Q Consensus 240 -------------------------------------------------------------------------~N~l~~~ 246 (769)
+|.+ +.
T Consensus 243 ~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l-~~ 321 (606)
T 3vq2_A 243 DERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQL-KQ 321 (606)
T ss_dssp TSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCC-SS
T ss_pred cCCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccC-cc
Confidence 2222 11
Q ss_pred Ccc-------------------------------------------------cccCCcEEEeCCccccCCcCchhhcCCC
Q 004195 247 FPR-------------------------------------------------LHKKMVTLVLRNNRFQFGLNPDELRSYN 277 (769)
Q Consensus 247 ~p~-------------------------------------------------~~~~L~~L~l~~N~~~~~i~p~~~~~l~ 277 (769)
+|. .+++|++|++++|.+++ + |..+..++
T Consensus 322 lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~-~~~~~~l~ 399 (606)
T 3vq2_A 322 FPTLDLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-M-SANFMGLE 399 (606)
T ss_dssp CCCCCCSSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-E-CCCCTTCT
T ss_pred cccCCCCccceeeccCCcCccchhhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-c-hhhccCCC
Confidence 110 01234444444444442 3 46778889
Q ss_pred cCcEEeccCccccccCC-ccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCC-CCCccccccCCCceEE
Q 004195 278 QLQKLDISLNRFVGPFI-PSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTG-YLPSCLQVEAKTRLVL 355 (769)
Q Consensus 278 ~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g-~~p~~~~~~~~l~~l~ 355 (769)
+|+.|++++|.+.+..| ..+.++++|+.|++++|.+++..|..+..+++|+.|++++|.+++ .+|..+..+++++.++
T Consensus 400 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 479 (606)
T 3vq2_A 400 ELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLD 479 (606)
T ss_dssp TCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEE
T ss_pred CCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEE
Confidence 99999999999999887 689999999999999999999999999999999999999999998 4788999999999999
Q ss_pred CCCCCCChhh
Q 004195 356 YSKNCLSNEE 365 (769)
Q Consensus 356 l~~N~l~~~~ 365 (769)
+++|.+++..
T Consensus 480 Ls~n~l~~~~ 489 (606)
T 3vq2_A 480 LSKCQLEQIS 489 (606)
T ss_dssp CTTSCCCEEC
T ss_pred CCCCcCCccC
Confidence 9999998754
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-29 Score=286.79 Aligned_cols=112 Identities=15% Similarity=0.083 Sum_probs=78.6
Q ss_pred CCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCc--cccccCCCCCCCcEE
Q 004195 253 KMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTG--LLLQNMSCNPQLAFV 330 (769)
Q Consensus 253 ~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~--~~~~~~~~l~~L~~l 330 (769)
+|+.|++++|.+.... .+..+++|++|++++|++++.+|..+.++++|+.|++++|++++ .+|..+..+++|+.|
T Consensus 303 ~L~~L~l~~n~l~~~~---~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L 379 (520)
T 2z7x_B 303 NIKNFTVSGTRMVHML---CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQL 379 (520)
T ss_dssp CCSEEEEESSCCCCCC---CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEE
T ss_pred ceeEEEcCCCcccccc---chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEE
Confidence 3555555555554211 12567778888888888887777778888888888888888876 455667778888888
Q ss_pred EccCCcCCCCCCcc-ccccCCCceEECCCCCCChhhhc
Q 004195 331 DLSSNLLTGYLPSC-LQVEAKTRLVLYSKNCLSNEEQE 367 (769)
Q Consensus 331 ~l~~N~l~g~~p~~-~~~~~~l~~l~l~~N~l~~~~~~ 367 (769)
++++|++++.+|.. +..+++++.+++++|.+++..+.
T Consensus 380 ~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 417 (520)
T 2z7x_B 380 DISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFR 417 (520)
T ss_dssp ECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGG
T ss_pred ECCCCcCCcccccchhccCccCCEEECcCCCCCcchhh
Confidence 88888888755543 56667778888888877765543
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.4e-29 Score=285.26 Aligned_cols=259 Identities=21% Similarity=0.242 Sum_probs=163.6
Q ss_pred CCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCc
Q 004195 95 LAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTG 174 (769)
Q Consensus 95 l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~ 174 (769)
+++|.+.+..+..|.++++|++|+|++|++++..|+.|+++++|++|||++|+|+ .+|.. .+++|++|+|++|++++
T Consensus 59 Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~ 135 (562)
T 3a79_B 59 LSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDLSFNDFDV 135 (562)
T ss_dssp CCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEECCSSCCSB
T ss_pred CCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEECCCCCccc
Confidence 4455566666677888888888888888888877888888888888888888887 56665 78888888888888876
Q ss_pred -cCCccCcCCcCCCEEeccCCCCcccCCccccCCCCC--CEEEccCccc--cccCCC-CCCC------------------
Q 004195 175 -AVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSL--RVVSLSANHL--SGEIPD-LRNL------------------ 230 (769)
Q Consensus 175 -~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L--~~L~ls~N~l--~~~~p~-l~~l------------------ 230 (769)
.+|..|+++++|++|+|++|.+++. .+.++++| +.|++++|++ ++..|. +..+
T Consensus 136 l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~ 212 (562)
T 3a79_B 136 LPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQ 212 (562)
T ss_dssp CCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCC
T ss_pred cCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchhhh
Confidence 3467888888888888888877642 22233333 5555555444 322221 1100
Q ss_pred ---------------------------------------------------------------ccCcEEeccCCcCCCCC
Q 004195 231 ---------------------------------------------------------------KNLRVFDVQDNYFGPRF 247 (769)
Q Consensus 231 ---------------------------------------------------------------~~L~~l~l~~N~l~~~~ 247 (769)
.+|++|++++|.++|.+
T Consensus 213 ~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~i 292 (562)
T 3a79_B 213 VNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERI 292 (562)
T ss_dssp CEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCC
T ss_pred hhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccc
Confidence 03333333333333322
Q ss_pred c--------------------------------------------------------ccccCCcEEEeCCccccCCcCch
Q 004195 248 P--------------------------------------------------------RLHKKMVTLVLRNNRFQFGLNPD 271 (769)
Q Consensus 248 p--------------------------------------------------------~~~~~L~~L~l~~N~~~~~i~p~ 271 (769)
| ...++|++|++++|.+++.+ |.
T Consensus 293 p~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l~~~~-~~ 371 (562)
T 3a79_B 293 DREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSV-FQ 371 (562)
T ss_dssp CCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTT-TT
T ss_pred cchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCCccccch-hh
Confidence 2 22345666777777776544 66
Q ss_pred hhcCCCcCcEEeccCcccccc--CCccCCCCCCCCEEEccCCcCCcccc-ccCCCCCCCcEEEccCCcCCCCCCcccccc
Q 004195 272 ELRSYNQLQKLDISLNRFVGP--FIPSLLSLPSITYLDIHGNKLTGLLL-QNMSCNPQLAFVDLSSNLLTGYLPSCLQVE 348 (769)
Q Consensus 272 ~~~~l~~L~~L~Ls~N~l~~~--~~~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~ 348 (769)
.+..+++|++|+|++|++++. +|..+.++++|+.|++++|++++.+| ..+..+++|+.|++++|++++.+|..+.
T Consensus 372 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~-- 449 (562)
T 3a79_B 372 GCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP-- 449 (562)
T ss_dssp TCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--
T ss_pred hhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--
Confidence 666777777777777776652 23456667777777777777766333 3456666666666666666666555443
Q ss_pred CCCceEECCCCCCC
Q 004195 349 AKTRLVLYSKNCLS 362 (769)
Q Consensus 349 ~~l~~l~l~~N~l~ 362 (769)
++++.+++++|.++
T Consensus 450 ~~L~~L~L~~N~l~ 463 (562)
T 3a79_B 450 PKVKVLDLHNNRIM 463 (562)
T ss_dssp TTCSEEECCSSCCC
T ss_pred CcCCEEECCCCcCc
Confidence 45666666666665
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.1e-29 Score=265.50 Aligned_cols=260 Identities=21% Similarity=0.229 Sum_probs=224.6
Q ss_pred CCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCC
Q 004195 94 GLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFT 173 (769)
Q Consensus 94 ~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~ 173 (769)
++++|.+.+..+..|.++++|++|+|++|.+++..|..|+++++|++|+|++|+++ .+|..+. ++|++|+|++|+++
T Consensus 58 ~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~ 134 (330)
T 1xku_A 58 DLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEIT 134 (330)
T ss_dssp ECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCC
T ss_pred ECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCccc
Confidence 34556666666678999999999999999999998999999999999999999998 6777665 79999999999999
Q ss_pred ccCCccCcCCcCCCEEeccCCCCc--ccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCccc-
Q 004195 174 GAVPSELSLLQVLSVLSLKNNSLS--GFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRL- 250 (769)
Q Consensus 174 ~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~- 250 (769)
+..+..|.++++|++|+|++|.++ +..+..+.++++|++|++++|.++.....+. ++|+.|++++|.+++..|..
T Consensus 135 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~--~~L~~L~l~~n~l~~~~~~~~ 212 (330)
T 1xku_A 135 KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLP--PSLTELHLDGNKITKVDAASL 212 (330)
T ss_dssp BBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCC--TTCSEEECTTSCCCEECTGGG
T ss_pred ccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCcccc--ccCCEEECCCCcCCccCHHHh
Confidence 888888999999999999999996 4788899999999999999999987544443 89999999999998876654
Q ss_pred --ccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCC-----
Q 004195 251 --HKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSC----- 323 (769)
Q Consensus 251 --~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~----- 323 (769)
+++|+.|+|++|.+++. .+..+..+++|++|+|++|.++ .+|..+..+++|++|++++|++++..+..|..
T Consensus 213 ~~l~~L~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~ 290 (330)
T 1xku_A 213 KGLNNLAKLGLSFNSISAV-DNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNT 290 (330)
T ss_dssp TTCTTCCEEECCSSCCCEE-CTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCT
T ss_pred cCCCCCCEEECCCCcCcee-ChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCccccc
Confidence 46899999999999864 3778999999999999999998 57888999999999999999999988777754
Q ss_pred -CCCCcEEEccCCcCCC--CCCccccccCCCceEECCCCC
Q 004195 324 -NPQLAFVDLSSNLLTG--YLPSCLQVEAKTRLVLYSKNC 360 (769)
Q Consensus 324 -l~~L~~l~l~~N~l~g--~~p~~~~~~~~l~~l~l~~N~ 360 (769)
.+.|+.+++++|.+.. ..|..+..+..++.+++++|+
T Consensus 291 ~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 291 KKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp TSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred ccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 3788999999999863 667788888889999998884
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.6e-29 Score=265.51 Aligned_cols=245 Identities=21% Similarity=0.213 Sum_probs=213.3
Q ss_pred CCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEec
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL 191 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 191 (769)
++|+.|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|+++ .+|..+. ++|++|+|
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l 130 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRI 130 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEEC
Confidence 68999999999998888889999999999999999999888999999999999999999998 6676665 89999999
Q ss_pred cCCCCcccCCccccCCCCCCEEEccCccccc--cCCC-CCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCc
Q 004195 192 KNNSLSGFLPVSLTGLQSLRVVSLSANHLSG--EIPD-LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGL 268 (769)
Q Consensus 192 ~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~--~~p~-l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i 268 (769)
++|.+++..+..|.++++|+.|++++|.++. ..+. +..+ +|+.|++++|.+++......++|++|++++|.+++..
T Consensus 131 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~i~~~~ 209 (332)
T 2ft3_A 131 HDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDLPETLNELHLDHNKIQAIE 209 (332)
T ss_dssp CSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCCSSSCSSCSCCBCCSSCCCCCC
T ss_pred CCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCccCccccCCCCEEECCCCcCCccC
Confidence 9999998777789999999999999999963 4443 6666 9999999999998755555678999999999998643
Q ss_pred CchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCcccccc
Q 004195 269 NPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVE 348 (769)
Q Consensus 269 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~ 348 (769)
+..+..+++|++|+|++|.+++..+..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|++++..+..+...
T Consensus 210 -~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~ 287 (332)
T 2ft3_A 210 -LEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPV 287 (332)
T ss_dssp -TTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCS
T ss_pred -HHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHcccc
Confidence 788999999999999999999987778999999999999999998 577788999999999999999998777766543
Q ss_pred ------CCCceEECCCCCCC
Q 004195 349 ------AKTRLVLYSKNCLS 362 (769)
Q Consensus 349 ------~~l~~l~l~~N~l~ 362 (769)
..++.+++++|.+.
T Consensus 288 ~~~~~~~~l~~L~l~~N~~~ 307 (332)
T 2ft3_A 288 GFGVKRAYYNGISLFNNPVP 307 (332)
T ss_dssp SCCSSSCCBSEEECCSSSSC
T ss_pred ccccccccccceEeecCccc
Confidence 45788999999876
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.8e-29 Score=284.20 Aligned_cols=132 Identities=20% Similarity=0.230 Sum_probs=115.1
Q ss_pred CCCccCcEEeccCCcCCCCCccc---ccCCcEEEeCCccccC--CcCchhhcCCCcCcEEeccCccccccCCcc-CCCCC
Q 004195 228 RNLKNLRVFDVQDNYFGPRFPRL---HKKMVTLVLRNNRFQF--GLNPDELRSYNQLQKLDISLNRFVGPFIPS-LLSLP 301 (769)
Q Consensus 228 ~~l~~L~~l~l~~N~l~~~~p~~---~~~L~~L~l~~N~~~~--~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~-~~~l~ 301 (769)
..+++|+.|++++|.+++.+|.. +++|++|++++|++++ .+ |..+..+++|++|++++|.+.+.+|.. +..++
T Consensus 321 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~-~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~ 399 (520)
T 2z7x_B 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKI-AEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTK 399 (520)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHH-HHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCT
T ss_pred hhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccc-hHHHhhCCCCCEEECCCCcCCcccccchhccCc
Confidence 57788999999999999877754 5689999999999985 34 677999999999999999999866654 88899
Q ss_pred CCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCCh
Q 004195 302 SITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 302 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 363 (769)
+|+.|++++|++++..|..+. ++|+.|++++|+++ .+|..+..+++++.+++++|.++.
T Consensus 400 ~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~ 458 (520)
T 2z7x_B 400 SLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKS 458 (520)
T ss_dssp TCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC
T ss_pred cCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCc
Confidence 999999999999998887765 78999999999999 788877789999999999999874
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-29 Score=290.15 Aligned_cols=266 Identities=24% Similarity=0.256 Sum_probs=179.0
Q ss_pred CCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCc
Q 004195 95 LAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTG 174 (769)
Q Consensus 95 l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~ 174 (769)
+++|.+.+..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|++++
T Consensus 33 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 112 (549)
T 2z81_A 33 LSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQT 112 (549)
T ss_dssp CCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSS
T ss_pred CcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccc
Confidence 33444444556677788888888888888887777788888888888888888887666668888888888888888875
Q ss_pred -cCCccCcCCcCCCEEeccCCCCcccCC-ccccCCCCCCEEEccCccccccCCC-CC-----------------------
Q 004195 175 -AVPSELSLLQVLSVLSLKNNSLSGFLP-VSLTGLQSLRVVSLSANHLSGEIPD-LR----------------------- 228 (769)
Q Consensus 175 -~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~ls~N~l~~~~p~-l~----------------------- 228 (769)
.+|..|+++++|++|+|++|.+.+.+| ..|.++++|++|++++|++++.+|. +.
T Consensus 113 ~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~ 192 (549)
T 2z81_A 113 LGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFA 192 (549)
T ss_dssp SCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHH
T ss_pred cchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhH
Confidence 356778888888888888887444444 5778888888888888888776553 33
Q ss_pred -CCccCcEEeccCCcCCCCC----c--cccc-------------------------------------------------
Q 004195 229 -NLKNLRVFDVQDNYFGPRF----P--RLHK------------------------------------------------- 252 (769)
Q Consensus 229 -~l~~L~~l~l~~N~l~~~~----p--~~~~------------------------------------------------- 252 (769)
.+++|+.|++++|.+++.. + ....
T Consensus 193 ~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~ 272 (549)
T 2z81_A 193 DILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPS 272 (549)
T ss_dssp HSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCC
T ss_pred hhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhcccccccccccccccccccccc
Confidence 3566777777777776521 0 0011
Q ss_pred --------------------------------------CCcEEEeCCccccCCcCchhh-cCCCcCcEEeccCccccccC
Q 004195 253 --------------------------------------KMVTLVLRNNRFQFGLNPDEL-RSYNQLQKLDISLNRFVGPF 293 (769)
Q Consensus 253 --------------------------------------~L~~L~l~~N~~~~~i~p~~~-~~l~~L~~L~Ls~N~l~~~~ 293 (769)
+|+.|++++|.+. .+ |..+ ..+++|++|+|++|++.+.+
T Consensus 273 ~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~i-p~~~~~~l~~L~~L~Ls~N~l~~~~ 350 (549)
T 2z81_A 273 ESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LV-PCSFSQHLKSLEFLDLSENLMVEEY 350 (549)
T ss_dssp TTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CC-CHHHHHHCTTCCEEECCSSCCCHHH
T ss_pred chhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cC-CHHHHhcCccccEEEccCCcccccc
Confidence 2333344444433 23 3333 45677777777777777655
Q ss_pred Cc---cCCCCCCCCEEEccCCcCCcccc--ccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCCh
Q 004195 294 IP---SLLSLPSITYLDIHGNKLTGLLL--QNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 294 ~~---~~~~l~~L~~L~l~~N~l~~~~~--~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 363 (769)
|+ .++.+++|+.|+|++|++++..+ ..+..+++|+.|++++|+++ .+|..+..+++++.+++++|.++.
T Consensus 351 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~ 424 (549)
T 2z81_A 351 LKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV 424 (549)
T ss_dssp HHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC
T ss_pred ccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc
Confidence 32 35667777777777777766532 44666777777777777777 466666666777777777777653
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.7e-29 Score=286.31 Aligned_cols=138 Identities=19% Similarity=0.179 Sum_probs=104.7
Q ss_pred CCCccCcEEeccCCcCCCCCccc--ccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCE
Q 004195 228 RNLKNLRVFDVQDNYFGPRFPRL--HKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITY 305 (769)
Q Consensus 228 ~~l~~L~~l~l~~N~l~~~~p~~--~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 305 (769)
..+++|+.|++++|.+.+..+.. +++|+.|++++|.+.+...+..+..+++|++|++++|.+.+..|..+.++++|+.
T Consensus 370 ~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 449 (570)
T 2z63_A 370 FGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEV 449 (570)
T ss_dssp HTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCE
T ss_pred cccCccCEEECCCCccccccccccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcE
Confidence 34567778888888776554432 4678888888888876543356777888888888888888777777888888888
Q ss_pred EEccCCcCC-ccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCChhh
Q 004195 306 LDIHGNKLT-GLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSNEE 365 (769)
Q Consensus 306 L~l~~N~l~-~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~~~ 365 (769)
|++++|.++ +.+|..+..+++|+.|++++|++++..|..+..+++++.+++++|.+++..
T Consensus 450 L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 510 (570)
T 2z63_A 450 LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVP 510 (570)
T ss_dssp EECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred EECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCC
Confidence 888888877 567777888888888888888888777877777788888888888777643
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.2e-28 Score=260.66 Aligned_cols=259 Identities=20% Similarity=0.231 Sum_probs=220.1
Q ss_pred CCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCC
Q 004195 94 GLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFT 173 (769)
Q Consensus 94 ~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~ 173 (769)
++++|.+....+..|.++++|++|+|++|.+++..|..|+++++|++|+|++|+++ .+|..+. ++|++|+|++|+++
T Consensus 60 ~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~ 136 (332)
T 2ft3_A 60 DLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIR 136 (332)
T ss_dssp ECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCC
T ss_pred ECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccC
Confidence 34555555566778999999999999999999888999999999999999999998 6777665 89999999999999
Q ss_pred ccCCccCcCCcCCCEEeccCCCCc--ccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCccc-
Q 004195 174 GAVPSELSLLQVLSVLSLKNNSLS--GFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRL- 250 (769)
Q Consensus 174 ~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~- 250 (769)
+..+..|.++++|++|++++|.++ +..|..+..+ +|+.|++++|++++.+..+. ++|+.|++++|.+++..+..
T Consensus 137 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~~~~~--~~L~~L~l~~n~i~~~~~~~l 213 (332)
T 2ft3_A 137 KVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDL 213 (332)
T ss_dssp CCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCCSSSC--SSCSCCBCCSSCCCCCCTTSS
T ss_pred ccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCccCcccc--CCCCEEECCCCcCCccCHHHh
Confidence 777778999999999999999996 4778888888 99999999999987544443 78999999999998877653
Q ss_pred --ccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCC----
Q 004195 251 --HKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCN---- 324 (769)
Q Consensus 251 --~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l---- 324 (769)
+.+|+.|+|++|.+++.. +..+..+++|++|+|++|+++ .+|..+..+++|+.|++++|++++..+..|...
T Consensus 214 ~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~ 291 (332)
T 2ft3_A 214 LRYSKLYRLGLGHNQIRMIE-NGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGV 291 (332)
T ss_dssp TTCTTCSCCBCCSSCCCCCC-TTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCS
T ss_pred cCCCCCCEEECCCCcCCcCC-hhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHcccccccc
Confidence 468999999999998643 778999999999999999998 578889999999999999999998877777653
Q ss_pred --CCCcEEEccCCcCC--CCCCccccccCCCceEECCCCC
Q 004195 325 --PQLAFVDLSSNLLT--GYLPSCLQVEAKTRLVLYSKNC 360 (769)
Q Consensus 325 --~~L~~l~l~~N~l~--g~~p~~~~~~~~l~~l~l~~N~ 360 (769)
+.|+.|++++|.+. +..|..+..++.++.+++++|.
T Consensus 292 ~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 292 KRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp SSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 67899999999988 6778888889999999998874
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.8e-28 Score=286.13 Aligned_cols=285 Identities=19% Similarity=0.188 Sum_probs=235.7
Q ss_pred CCeeEEEeCCCCCCCCC------------CCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeec
Q 004195 76 DNLTQLHIAGDNNNNIN------------GGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNL 143 (769)
Q Consensus 76 ~~v~~l~l~~~~~~~~~------------~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~L 143 (769)
.+++.|+++++.+...+ .++++|.+.+..|..|+++++|++|+|++|.+++..+..|+++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 36888999888665432 235567777888889999999999999999998766668999999999999
Q ss_pred cCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCcccc--CCCCCCEEEccCcccc
Q 004195 144 SSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLT--GLQSLRVVSLSANHLS 221 (769)
Q Consensus 144 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~--~l~~L~~L~ls~N~l~ 221 (769)
++|++++..|..|+++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..+. .+++|+.|++++|+++
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~ 184 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIK 184 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCC
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCccc
Confidence 99999988788999999999999999999999999999999999999999999988877654 5689999999999999
Q ss_pred ccCCC-CCCC---------------------------ccCcEEeccCCcCCCCCcccc-----cCCcEEEeCCccccCCc
Q 004195 222 GEIPD-LRNL---------------------------KNLRVFDVQDNYFGPRFPRLH-----KKMVTLVLRNNRFQFGL 268 (769)
Q Consensus 222 ~~~p~-l~~l---------------------------~~L~~l~l~~N~l~~~~p~~~-----~~L~~L~l~~N~~~~~i 268 (769)
+..|. +..+ ++|+.|++++|.+.+..|..+ .+|+.|+|++|.+++..
T Consensus 185 ~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~ 264 (680)
T 1ziw_A 185 EFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVG 264 (680)
T ss_dssp CBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEEC
T ss_pred ccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccC
Confidence 87764 2222 567888888888887766543 34999999999998644
Q ss_pred CchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCc-----cccc----cCCCCCCCcEEEccCCcCCC
Q 004195 269 NPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTG-----LLLQ----NMSCNPQLAFVDLSSNLLTG 339 (769)
Q Consensus 269 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-----~~~~----~~~~l~~L~~l~l~~N~l~g 339 (769)
|..+..+++|++|+|++|++.+..|..|.++++|+.|++++|...+ .+|. .+..+++|+.|++++|.+++
T Consensus 265 -~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~ 343 (680)
T 1ziw_A 265 -NDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPG 343 (680)
T ss_dssp -TTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCC
T ss_pred -cccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCC
Confidence 7889999999999999999999888888888888888888776554 2232 66778888888888888888
Q ss_pred CCCccccccCCCceEECCCCCC
Q 004195 340 YLPSCLQVEAKTRLVLYSKNCL 361 (769)
Q Consensus 340 ~~p~~~~~~~~l~~l~l~~N~l 361 (769)
..|..+..+++++.+++++|.+
T Consensus 344 ~~~~~~~~l~~L~~L~Ls~n~~ 365 (680)
T 1ziw_A 344 IKSNMFTGLINLKYLSLSNSFT 365 (680)
T ss_dssp CCTTTTTTCTTCCEEECTTCBS
T ss_pred CChhHhccccCCcEEECCCCch
Confidence 8777777777777777777754
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.2e-28 Score=278.23 Aligned_cols=267 Identities=18% Similarity=0.115 Sum_probs=215.6
Q ss_pred eEEEeCCCCCCCCCCCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccC
Q 004195 79 TQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISS 158 (769)
Q Consensus 79 ~~l~l~~~~~~~~~~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 158 (769)
+.++++++.+..+ |..+. ++|++|+|++|.+++..|..|+++++|++|+|++|++++..|..|++
T Consensus 34 ~~l~ls~~~L~~i-------------p~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 98 (562)
T 3a79_B 34 SMVDYSNRNLTHV-------------PKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLF 98 (562)
T ss_dssp CEEECTTSCCCSC-------------CTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTT
T ss_pred cEEEcCCCCCccC-------------CCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCC
Confidence 6777777665532 22232 78999999999999988899999999999999999999988999999
Q ss_pred CCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcc-cCCccccCCCCCCEEEccCccccccCCCCCCCccC--cE
Q 004195 159 LRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSG-FLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNL--RV 235 (769)
Q Consensus 159 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L--~~ 235 (769)
+++|++|+|++|+++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|++++|++++ ..+..+++| +.
T Consensus 99 l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~--~~~~~l~~L~L~~ 173 (562)
T 3a79_B 99 NQDLEYLDVSHNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ--LDLLPVAHLHLSC 173 (562)
T ss_dssp CTTCCEEECTTSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT--TTTGGGTTSCEEE
T ss_pred CCCCCEEECCCCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCcccc--CchhhhhhceeeE
Confidence 999999999999999 67766 89999999999999997 457899999999999999999986 345566666 99
Q ss_pred EeccCCcC--CCCCcccc--------------------------------------------------------------
Q 004195 236 FDVQDNYF--GPRFPRLH-------------------------------------------------------------- 251 (769)
Q Consensus 236 l~l~~N~l--~~~~p~~~-------------------------------------------------------------- 251 (769)
|++++|.+ ++..|..+
T Consensus 174 L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~ 253 (562)
T 3a79_B 174 ILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLN 253 (562)
T ss_dssp EEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEE
T ss_pred EEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceE
Confidence 99999988 55443221
Q ss_pred ----------------------cCCcEEEeCCccccCCcCchhh------------------------------------
Q 004195 252 ----------------------KKMVTLVLRNNRFQFGLNPDEL------------------------------------ 273 (769)
Q Consensus 252 ----------------------~~L~~L~l~~N~~~~~i~p~~~------------------------------------ 273 (769)
.+|++|++++|.++|.+ |..+
T Consensus 254 L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~i-p~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~ 332 (562)
T 3a79_B 254 VTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERI-DREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMN 332 (562)
T ss_dssp EEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCC-CCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCC
T ss_pred EEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccc-cchhhhcccccchheehhhcccceeecChhhhhhhhccCc
Confidence 15677778888887766 4433
Q ss_pred -----------------cCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCcc--ccccCCCCCCCcEEEccC
Q 004195 274 -----------------RSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGL--LLQNMSCNPQLAFVDLSS 334 (769)
Q Consensus 274 -----------------~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~--~~~~~~~l~~L~~l~l~~ 334 (769)
..+++|++|++++|++++.+|..+.++++|+.|+|++|++++. +|..+..+++|+.|++++
T Consensus 333 L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~ 412 (562)
T 3a79_B 333 IKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSL 412 (562)
T ss_dssp CSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTT
T ss_pred ceEEEccCCCcccccCccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCC
Confidence 5677888888888888888888888888888888888888873 356778888888888888
Q ss_pred CcCCCCCCc-cccccCCCceEECCCCCCChhhh
Q 004195 335 NLLTGYLPS-CLQVEAKTRLVLYSKNCLSNEEQ 366 (769)
Q Consensus 335 N~l~g~~p~-~~~~~~~l~~l~l~~N~l~~~~~ 366 (769)
|++++.+|. .+..+++++.+++++|.+++..+
T Consensus 413 N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 445 (562)
T 3a79_B 413 NSLNSHAYDRTCAWAESILVLNLSSNMLTGSVF 445 (562)
T ss_dssp SCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGG
T ss_pred CcCCCccChhhhcCcccCCEEECCCCCCCcchh
Confidence 888885554 46677888888888888876544
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.8e-28 Score=280.00 Aligned_cols=287 Identities=20% Similarity=0.175 Sum_probs=207.5
Q ss_pred CeeEEEeCCCCCCCCC------------CCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeecc
Q 004195 77 NLTQLHIAGDNNNNIN------------GGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLS 144 (769)
Q Consensus 77 ~v~~l~l~~~~~~~~~------------~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls 144 (769)
+++.|+++++.+.... .++++|.+.+..+..|+++++|++|+|++|.+++..|..|+++++|++|+|+
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 108 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccc
Confidence 5788888877654321 2345566666666778888888888888888887777888888888888888
Q ss_pred CcccCCcCCccccCCCcCCEEEcccCcCCc-cCCccCcCCcCCCEEeccCCCCcccCCccccCCCCC----CEEEccCcc
Q 004195 145 SNYLSGSIPVQISSLRNLQTLILDDNKFTG-AVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSL----RVVSLSANH 219 (769)
Q Consensus 145 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L----~~L~ls~N~ 219 (769)
+|++++..+..|+++++|++|+|++|.+++ .+|..|+++++|++|++++|.+++..|..++.+++| +.|++++|.
T Consensus 109 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~ 188 (570)
T 2z63_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (570)
T ss_dssp TSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCC
T ss_pred ccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCC
Confidence 888886555578888888888888888876 468888888888888888888776655544444444 344444443
Q ss_pred ccccCC--------------------------------------------------------------------------
Q 004195 220 LSGEIP-------------------------------------------------------------------------- 225 (769)
Q Consensus 220 l~~~~p-------------------------------------------------------------------------- 225 (769)
+++..|
T Consensus 189 l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~ 268 (570)
T 2z63_A 189 MNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLD 268 (570)
T ss_dssp CCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETT
T ss_pred ceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcch
Confidence 332211
Q ss_pred -------------------------------CCC------------------------------------------CCcc
Q 004195 226 -------------------------------DLR------------------------------------------NLKN 232 (769)
Q Consensus 226 -------------------------------~l~------------------------------------------~l~~ 232 (769)
.+. .+++
T Consensus 269 ~~~~~~~~~~~~l~~L~~L~l~~~~l~~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~~ 348 (570)
T 2z63_A 269 YYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPS 348 (570)
T ss_dssp EEESCSTTTTGGGTTCSEEEEESCEECSCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBCTT
T ss_pred hhhhhchhhhcCcCcccEEEecCccchhhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCccccccccccCCC
Confidence 111 1222
Q ss_pred CcEEeccCCcCCCCC--cc---cccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCC-ccCCCCCCCCEE
Q 004195 233 LRVFDVQDNYFGPRF--PR---LHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFI-PSLLSLPSITYL 306 (769)
Q Consensus 233 L~~l~l~~N~l~~~~--p~---~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L 306 (769)
|+.|++++|.+++.. |. .+++|++|++++|.+.+ + |..+..+++|++|++++|.+.+..+ ..+.++++|+.|
T Consensus 349 L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~-~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 426 (570)
T 2z63_A 349 LEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-M-SSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYL 426 (570)
T ss_dssp CCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEE-E-EEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEE
T ss_pred CCEEeCcCCccCccccccccccccCccCEEECCCCcccc-c-cccccccCCCCEEEccCCccccccchhhhhcCCCCCEE
Confidence 222233333222211 11 12455556666665553 2 3348889999999999999998766 468999999999
Q ss_pred EccCCcCCccccccCCCCCCCcEEEccCCcCC-CCCCccccccCCCceEECCCCCCChhh
Q 004195 307 DIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLT-GYLPSCLQVEAKTRLVLYSKNCLSNEE 365 (769)
Q Consensus 307 ~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~-g~~p~~~~~~~~l~~l~l~~N~l~~~~ 365 (769)
++++|.+++..|..+..+++|+.|++++|.++ +.+|..+..+++++.+++++|.+++..
T Consensus 427 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~ 486 (570)
T 2z63_A 427 DISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLS 486 (570)
T ss_dssp ECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEEC
T ss_pred eCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCC
Confidence 99999999999999999999999999999998 789999999999999999999998754
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-27 Score=266.96 Aligned_cols=226 Identities=21% Similarity=0.186 Sum_probs=187.6
Q ss_pred CCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEec
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL 191 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 191 (769)
++|+.|+|++|++++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|++++..+..|.++++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 57899999999999999999999999999999999999988899999999999999999999877788999999999999
Q ss_pred cCCCCcccCCccccCCCCCCEEEccCccccccCCC--CCCCccCcEEeccCCcCCCCCccc--ccCCcEEEeCCccccCC
Q 004195 192 KNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD--LRNLKNLRVFDVQDNYFGPRFPRL--HKKMVTLVLRNNRFQFG 267 (769)
Q Consensus 192 ~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~--l~~l~~L~~l~l~~N~l~~~~p~~--~~~L~~L~l~~N~~~~~ 267 (769)
++|.++...+..|.++++|+.|++++|+..+.++. +..+++|+.|++++|.+++. |.. +.+|+.|+|++|.+++.
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~ 233 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-PNLTPLVGLEELEMSGNHFPEI 233 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-CCCTTCTTCCEEECTTSCCSEE
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-ccccccccccEEECcCCcCccc
Confidence 99999988888999999999999999655555553 88899999999999988753 433 45677777777777754
Q ss_pred cCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCC
Q 004195 268 LNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTG 339 (769)
Q Consensus 268 i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g 339 (769)
. |..|..+++|+.|+|++|++++..+..|.++++|+.|+|++|++++..+..+..+++|+.|+|++|.+..
T Consensus 234 ~-~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 234 R-PGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp C-GGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred C-cccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCC
Confidence 3 6777777777777777777777777777777777777777777777666677777777777777776653
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.4e-28 Score=279.78 Aligned_cols=276 Identities=18% Similarity=0.132 Sum_probs=230.3
Q ss_pred CeeEEEeCCCCCCCCC------------CCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeecc
Q 004195 77 NLTQLHIAGDNNNNIN------------GGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLS 144 (769)
Q Consensus 77 ~v~~l~l~~~~~~~~~------------~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls 144 (769)
+++.+++.++.+..++ .++++|.+.+..+..|+.+++|++|+|++|.+++..|..|+++++|++|+|+
T Consensus 52 ~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 131 (597)
T 3oja_B 52 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLE 131 (597)
T ss_dssp CCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEee
Confidence 4567777766443322 3456677777778899999999999999999999888999999999999999
Q ss_pred CcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccc--
Q 004195 145 SNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSG-- 222 (769)
Q Consensus 145 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~-- 222 (769)
+|.|++..+..|+++++|++|+|++|.+++..|..|+++++|++|+|++|.+++.. ++.+++|+.|++++|.+++
T Consensus 132 ~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~l~ 208 (597)
T 3oja_B 132 RNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTLA 208 (597)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSEEE
T ss_pred CCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCcccccc
Confidence 99999766666799999999999999999999999999999999999999999753 3445566666666555544
Q ss_pred -----------------cCCCCCCCccCcEEeccCCcCCCCCcc--cccCCcEEEeCCccccCCcCchhhcCCCcCcEEe
Q 004195 223 -----------------EIPDLRNLKNLRVFDVQDNYFGPRFPR--LHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLD 283 (769)
Q Consensus 223 -----------------~~p~l~~l~~L~~l~l~~N~l~~~~p~--~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~ 283 (769)
..+.+ .++|+.|++++|.+++. +. .+++|+.|+|++|.+++.. |..+..+++|+.|+
T Consensus 209 ~~~~L~~L~ls~n~l~~~~~~~--~~~L~~L~L~~n~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~ 284 (597)
T 3oja_B 209 IPIAVEELDASHNSINVVRGPV--NVELTILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELEKIM-YHPFVKMQRLERLY 284 (597)
T ss_dssp CCTTCSEEECCSSCCCEEECSC--CSCCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCEEE-SGGGTTCSSCCEEE
T ss_pred CCchhheeeccCCccccccccc--CCCCCEEECCCCCCCCC-hhhccCCCCCEEECCCCccCCCC-HHHhcCccCCCEEE
Confidence 22222 35899999999999874 32 2679999999999999765 89999999999999
Q ss_pred ccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCCh
Q 004195 284 ISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 284 Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 363 (769)
|++|.+++ +|..+..+++|+.|+|++|.+++ +|..+..+++|+.|+|++|.+++.. +..+++++.+++++|.+++
T Consensus 285 Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~~-i~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~L~~L~l~~N~~~~ 359 (597)
T 3oja_B 285 ISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSHNDWDC 359 (597)
T ss_dssp CTTSCCCE-EECSSSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCSSCEEH
T ss_pred CCCCCCCC-CCcccccCCCCcEEECCCCCCCc-cCcccccCCCCCEEECCCCCCCCcC---hhhcCCCCEEEeeCCCCCC
Confidence 99999998 57778889999999999999995 6777888999999999999999764 4566789999999998876
Q ss_pred h
Q 004195 364 E 364 (769)
Q Consensus 364 ~ 364 (769)
.
T Consensus 360 ~ 360 (597)
T 3oja_B 360 N 360 (597)
T ss_dssp H
T ss_pred h
Confidence 4
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.3e-28 Score=278.28 Aligned_cols=286 Identities=24% Similarity=0.235 Sum_probs=214.9
Q ss_pred CeeEEEeCCCCCCCCC------------CCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeecc
Q 004195 77 NLTQLHIAGDNNNNIN------------GGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLS 144 (769)
Q Consensus 77 ~v~~l~l~~~~~~~~~------------~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls 144 (769)
+++.|+++++.+.... .++++|.+.+..+..|+++++|++|+|++|.+++..|..|+++++|++|+|+
T Consensus 27 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls 106 (549)
T 2z81_A 27 AMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLM 106 (549)
T ss_dssp TCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECT
T ss_pred CccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECC
Confidence 5888888887654321 2345577777777888999999999999999988777779999999999999
Q ss_pred CcccCC-cCCccccCCCcCCEEEcccCcCCccCC-ccCcCCcCCCEEeccCCCCcccCCccccC----------------
Q 004195 145 SNYLSG-SIPVQISSLRNLQTLILDDNKFTGAVP-SELSLLQVLSVLSLKNNSLSGFLPVSLTG---------------- 206 (769)
Q Consensus 145 ~N~l~g-~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~l~~---------------- 206 (769)
+|.+++ .+|..|+++++|++|+|++|++.+.+| ..|.++++|++|+|++|.+++.+|..+++
T Consensus 107 ~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~ 186 (549)
T 2z81_A 107 GNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAF 186 (549)
T ss_dssp TCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTT
T ss_pred CCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccc
Confidence 999886 467788899999999999988544554 67888888888888888888877776654
Q ss_pred --------CCCCCEEEccCccccccC------------------------------------------------------
Q 004195 207 --------LQSLRVVSLSANHLSGEI------------------------------------------------------ 224 (769)
Q Consensus 207 --------l~~L~~L~ls~N~l~~~~------------------------------------------------------ 224 (769)
+++|++|++++|++++..
T Consensus 187 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~ 266 (549)
T 2z81_A 187 LLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGL 266 (549)
T ss_dssp HHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECC
T ss_pred cchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhcccccccccccccccc
Confidence 556777777777766521
Q ss_pred -----------------------------------------------------------CC-C-CCCccCcEEeccCCcC
Q 004195 225 -----------------------------------------------------------PD-L-RNLKNLRVFDVQDNYF 243 (769)
Q Consensus 225 -----------------------------------------------------------p~-l-~~l~~L~~l~l~~N~l 243 (769)
|. + ..+++|+.|++++|.+
T Consensus 267 ~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l 346 (549)
T 2z81_A 267 GDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLM 346 (549)
T ss_dssp SCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCCCCHHHHHHCTTCCEEECCSSCC
T ss_pred ccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccccCCHHHHhcCccccEEEccCCcc
Confidence 00 0 2367788899999988
Q ss_pred CCCCcc------cccCCcEEEeCCccccCCc-CchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCcc
Q 004195 244 GPRFPR------LHKKMVTLVLRNNRFQFGL-NPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGL 316 (769)
Q Consensus 244 ~~~~p~------~~~~L~~L~l~~N~~~~~i-~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 316 (769)
.+.+|. .+++|+.|+|++|.+++.. .+..+..+++|++|++++|+++ .+|..+..+++|++|++++|++++.
T Consensus 347 ~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~l 425 (549)
T 2z81_A 347 VEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRVV 425 (549)
T ss_dssp CHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSCC
T ss_pred ccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcccc
Confidence 876542 2568889999999887431 0145788888999999999888 4677777777777777777777643
Q ss_pred ccc-----------------cCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCChhh
Q 004195 317 LLQ-----------------NMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSNEE 365 (769)
Q Consensus 317 ~~~-----------------~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~~~ 365 (769)
... ....+++|+.|+|++|+++ .+|. ...+++++.+++++|.+++.+
T Consensus 426 ~~~~~~~L~~L~Ls~N~l~~~~~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~ 489 (549)
T 2z81_A 426 KTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVP 489 (549)
T ss_dssp CTTSCTTCSEEECCSSCCSCCCCCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCC
T ss_pred cchhcCCceEEECCCCChhhhcccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcC
Confidence 211 1136788999999999998 6676 356788999999999988654
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-28 Score=259.32 Aligned_cols=230 Identities=23% Similarity=0.200 Sum_probs=177.7
Q ss_pred CCCcEEEeecccccCCCCccccCCCcCceeeccCcccCC--cCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEE
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSG--SIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVL 189 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 189 (769)
++|+.|+|++|+++...+..|.++++|++|+|++|.++. ..|..+..+++|++|+|++|.++ .+|..+..+++|++|
T Consensus 28 ~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L 106 (306)
T 2z66_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHL 106 (306)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEE
T ss_pred CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEE
Confidence 578999999999975555568899999999999999883 34677888999999999999987 577778899999999
Q ss_pred eccCCCCcccCC-ccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCC
Q 004195 190 SLKNNSLSGFLP-VSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFG 267 (769)
Q Consensus 190 ~L~~N~l~~~~p-~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~ 267 (769)
+|++|.+++..+ ..+.++++|++|++++|.+++.++. +..+++|+.|++++|.+.+ .
T Consensus 107 ~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~---------------------~ 165 (306)
T 2z66_A 107 DFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQE---------------------N 165 (306)
T ss_dssp ECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGG---------------------G
T ss_pred ECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCcccc---------------------c
Confidence 999999987655 6788899999999999998877765 6677777777777766543 1
Q ss_pred cCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccc
Q 004195 268 LNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQV 347 (769)
Q Consensus 268 i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~ 347 (769)
..|..+..+++|++|+|++|.+++..|..+..+++|+.|+|++|++++..+..+..+++|+.|++++|++++..|..+..
T Consensus 166 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 245 (306)
T 2z66_A 166 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQH 245 (306)
T ss_dssp EECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCC
T ss_pred cchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHh
Confidence 12556666777777777777777766777777777777777777777766666777777777777777777777777666
Q ss_pred c-CCCceEECCCCCCCh
Q 004195 348 E-AKTRLVLYSKNCLSN 363 (769)
Q Consensus 348 ~-~~l~~l~l~~N~l~~ 363 (769)
+ ++++.+++++|.+++
T Consensus 246 ~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 246 FPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp CCTTCCEEECTTCCEEC
T ss_pred hhccCCEEEccCCCeec
Confidence 6 367777777777654
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-28 Score=265.35 Aligned_cols=252 Identities=16% Similarity=0.129 Sum_probs=202.8
Q ss_pred CCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEec
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL 191 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 191 (769)
++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|+++++|++|+|++|++++..+..|+++++|++|+|
T Consensus 52 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 131 (353)
T 2z80_A 52 EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNL 131 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEEC
T ss_pred ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEEC
Confidence 47899999999998777778999999999999999999877888999999999999999998655555889999999999
Q ss_pred cCCCCcccCC-ccccCCCCCCEEEccCcc-ccccCC-CCCCCccCcEEeccCCcCCCCCccc---ccCCcEEEeCCcccc
Q 004195 192 KNNSLSGFLP-VSLTGLQSLRVVSLSANH-LSGEIP-DLRNLKNLRVFDVQDNYFGPRFPRL---HKKMVTLVLRNNRFQ 265 (769)
Q Consensus 192 ~~N~l~~~~p-~~l~~l~~L~~L~ls~N~-l~~~~p-~l~~l~~L~~l~l~~N~l~~~~p~~---~~~L~~L~l~~N~~~ 265 (769)
++|++++..+ ..+.++++|++|++++|+ +++..+ .+..+++|+.|++++|.+++..|.. +++|++|++++|.+.
T Consensus 132 ~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~ 211 (353)
T 2z80_A 132 LGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI 211 (353)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST
T ss_pred CCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc
Confidence 9999986444 478889999999999984 665544 4788899999999999988776654 457888999999886
Q ss_pred CCcCchhhcCCCcCcEEeccCccccccCCccCC---CCCCCCEEEccCCcCCc----cccccCCCCCCCcEEEccCCcCC
Q 004195 266 FGLNPDELRSYNQLQKLDISLNRFVGPFIPSLL---SLPSITYLDIHGNKLTG----LLLQNMSCNPQLAFVDLSSNLLT 338 (769)
Q Consensus 266 ~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~---~l~~L~~L~l~~N~l~~----~~~~~~~~l~~L~~l~l~~N~l~ 338 (769)
.+++..+..+++|++|++++|.+++..+..+. ..+.++.++|++|.+++ .+|..+..+++|+.|++++|+++
T Consensus 212 -~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~ 290 (353)
T 2z80_A 212 -LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK 290 (353)
T ss_dssp -THHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC
T ss_pred -cchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC
Confidence 44234456688999999999999886655443 45678889999998887 36777888999999999999999
Q ss_pred CCCCccccccCCCceEECCCCCCChh
Q 004195 339 GYLPSCLQVEAKTRLVLYSKNCLSNE 364 (769)
Q Consensus 339 g~~p~~~~~~~~l~~l~l~~N~l~~~ 364 (769)
...+..+..+++++.+++++|.+.+.
T Consensus 291 ~i~~~~~~~l~~L~~L~L~~N~~~~~ 316 (353)
T 2z80_A 291 SVPDGIFDRLTSLQKIWLHTNPWDCS 316 (353)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred ccCHHHHhcCCCCCEEEeeCCCccCc
Confidence 44444457888999999999987654
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.5e-27 Score=263.94 Aligned_cols=225 Identities=24% Similarity=0.232 Sum_probs=178.7
Q ss_pred CCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEec
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL 191 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 191 (769)
++++.|+|++|++++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|++++..+..|..+++|++|+|
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 67899999999999988899999999999999999999888889999999999999999999777778999999999999
Q ss_pred cCCCCcccCCccccCCCCCCEEEccCccccccCCC--CCCCccCcEEeccCCcCCCCCccc--ccCCcEEEeCCccccCC
Q 004195 192 KNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD--LRNLKNLRVFDVQDNYFGPRFPRL--HKKMVTLVLRNNRFQFG 267 (769)
Q Consensus 192 ~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~--l~~l~~L~~l~l~~N~l~~~~p~~--~~~L~~L~l~~N~~~~~ 267 (769)
++|.++...+..|.++++|+.|+|++|+..+.++. +..+++|+.|++++|.++. +|.. +.+|+.|+|++|.+++.
T Consensus 144 ~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~l~~L~~L~Ls~N~l~~~ 222 (440)
T 3zyj_A 144 RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IPNLTPLIKLDELDLSGNHLSAI 222 (440)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CCCCTTCSSCCEEECTTSCCCEE
T ss_pred CCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-ccccCCCcccCEEECCCCccCcc
Confidence 99999988888999999999999999665555553 8889999999999998873 3332 34666666666666643
Q ss_pred cCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCC
Q 004195 268 LNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLT 338 (769)
Q Consensus 268 i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~ 338 (769)
.|..|..+++|+.|+|++|++++..+..|.++++|+.|+|++|++++..+..+..+++|+.|+|++|.+.
T Consensus 223 -~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 223 -RPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp -CTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred -ChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 3566666666666666666666666666666666666666666666666666666666666666666654
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.8e-29 Score=266.33 Aligned_cols=245 Identities=24% Similarity=0.224 Sum_probs=148.2
Q ss_pred CCCCCCcEEEeecccccCCCCccccCCCcCceeeccCccc-CCcCCcccc-------CCCcCCEEEcccCcCCccCCccC
Q 004195 109 GSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYL-SGSIPVQIS-------SLRNLQTLILDDNKFTGAVPSEL 180 (769)
Q Consensus 109 ~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l-~g~~p~~~~-------~l~~L~~L~L~~N~l~~~~p~~~ 180 (769)
+.+++|+.|++++|.+ .+|..+... |++|+|++|.+ .+.+|..+. ++++|++|+|++|++++.+|..+
T Consensus 40 ~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 115 (312)
T 1wwl_A 40 GGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPL 115 (312)
T ss_dssp EEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCS
T ss_pred ccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHH
Confidence 3445555555555555 455444433 55555555555 334454444 45555566666665555555554
Q ss_pred --cCCcCCCEEeccCCCCcccCCccccCC-----CCCCEEEccCccccccCC-CCCCCccCcEEeccCCcCCCCC--c--
Q 004195 181 --SLLQVLSVLSLKNNSLSGFLPVSLTGL-----QSLRVVSLSANHLSGEIP-DLRNLKNLRVFDVQDNYFGPRF--P-- 248 (769)
Q Consensus 181 --~~l~~L~~L~L~~N~l~~~~p~~l~~l-----~~L~~L~ls~N~l~~~~p-~l~~l~~L~~l~l~~N~l~~~~--p-- 248 (769)
..+++|++|+|++|++++. |..++++ ++|++|+|++|++++.+| .++.+++|+.|++++|.+.+.+ |
T Consensus 116 ~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 194 (312)
T 1wwl_A 116 LEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISA 194 (312)
T ss_dssp SSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHH
T ss_pred HHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHH
Confidence 5555566666666655554 5555544 555666666665555543 3555555666666655554431 1
Q ss_pred ---ccccCCcEEEeCCccccC--CcCchhhcCCCcCcEEeccCccccccCC-ccCCCCCCCCEEEccCCcCCccccccCC
Q 004195 249 ---RLHKKMVTLVLRNNRFQF--GLNPDELRSYNQLQKLDISLNRFVGPFI-PSLLSLPSITYLDIHGNKLTGLLLQNMS 322 (769)
Q Consensus 249 ---~~~~~L~~L~l~~N~~~~--~i~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 322 (769)
..+++|++|+|++|.+++ .+....+..+++|++|+|++|++++.+| +.+..+++|+.|+|++|+++ .+|..+.
T Consensus 195 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~ 273 (312)
T 1wwl_A 195 LCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP 273 (312)
T ss_dssp SCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC
T ss_pred HHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc
Confidence 223456666666666652 1212334567788888888888887664 45666778888888888887 4566555
Q ss_pred CCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCCh
Q 004195 323 CNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 323 ~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 363 (769)
++|+.|||++|++++. |. +..+++++.+++++|.+++
T Consensus 274 --~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 274 --AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp --SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred --CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 7788888888888876 55 6677778888888887764
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-27 Score=262.01 Aligned_cols=251 Identities=18% Similarity=0.171 Sum_probs=197.2
Q ss_pred CCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEE
Q 004195 110 SLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVL 189 (769)
Q Consensus 110 ~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 189 (769)
.+++|++|++++|.++...+..|.++++|++|+|++|.+++..|..|..+++|++|+|++|++++..|..|+++++|++|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 47899999999999976555668999999999999999998888899999999999999999998888999999999999
Q ss_pred eccCCCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCc
Q 004195 190 SLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGL 268 (769)
Q Consensus 190 ~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i 268 (769)
+|++|.++...+..|.++++|++|++++|++++..+. +..+++|+.|++++|.+++.....+++|+.|++++|.+++.-
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~ 202 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLA 202 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEEE
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeecccccccccC
Confidence 9999999966556679999999999999999988775 899999999999999998765555566666666666554311
Q ss_pred Cchh---------------hcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEcc
Q 004195 269 NPDE---------------LRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLS 333 (769)
Q Consensus 269 ~p~~---------------~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~ 333 (769)
.|.. ....++|+.|++++|.+++. +.+..+++|+.|+|++|.+++..|..+..+++|+.|+|+
T Consensus 203 ~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 280 (390)
T 3o6n_A 203 IPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYIS 280 (390)
T ss_dssp CCSSCSEEECCSSCCCEEECCCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECC
T ss_pred CCCcceEEECCCCeeeeccccccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECC
Confidence 0110 01234677777777777652 556677777777777777777777777777777777777
Q ss_pred CCcCCCCCCccccccCCCceEECCCCCCCh
Q 004195 334 SNLLTGYLPSCLQVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 334 ~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 363 (769)
+|++++ +|..+..+++++.+++++|.++.
T Consensus 281 ~n~l~~-~~~~~~~l~~L~~L~L~~n~l~~ 309 (390)
T 3o6n_A 281 NNRLVA-LNLYGQPIPTLKVLDLSHNHLLH 309 (390)
T ss_dssp SSCCCE-EECSSSCCTTCCEEECCSSCCCC
T ss_pred CCcCcc-cCcccCCCCCCCEEECCCCccee
Confidence 777765 34445556677777777777653
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-29 Score=267.65 Aligned_cols=228 Identities=21% Similarity=0.228 Sum_probs=197.0
Q ss_pred cccccCCCCCCcEEEeecccc-cCCCCcccc-------CCCcCceeeccCcccCCcCCccc--cCCCcCCEEEcccCcCC
Q 004195 104 FFSTLGSLSSLKVLSLVSLGL-WGPLPGSIA-------HSSSLEILNLSSNYLSGSIPVQI--SSLRNLQTLILDDNKFT 173 (769)
Q Consensus 104 ~~~~~~~l~~L~~L~L~~n~l-~g~~p~~~~-------~l~~L~~L~Ls~N~l~g~~p~~~--~~l~~L~~L~L~~N~l~ 173 (769)
+|..+... |+.|+|++|.+ .+.+|..+. ++++|++|+|++|++++.+|..+ +.+++|++|+|++|+++
T Consensus 57 ~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 134 (312)
T 1wwl_A 57 DLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWA 134 (312)
T ss_dssp CCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCS
T ss_pred cHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCc
Confidence 34444444 89999999999 467888776 89999999999999999999987 89999999999999999
Q ss_pred ccCCccCcCC-----cCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccC---CCC--CCCccCcEEeccCCcC
Q 004195 174 GAVPSELSLL-----QVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEI---PDL--RNLKNLRVFDVQDNYF 243 (769)
Q Consensus 174 ~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~---p~l--~~l~~L~~l~l~~N~l 243 (769)
+. |..++.+ ++|++|+|++|++++..|..|+++++|++|+|++|++++.+ +.+ ..+++|+.|++++|.+
T Consensus 135 ~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l 213 (312)
T 1wwl_A 135 TR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGM 213 (312)
T ss_dssp SS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCC
T ss_pred ch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcC
Confidence 77 8888887 99999999999999988899999999999999999998752 334 8899999999999999
Q ss_pred CC--CCcc----cccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccc
Q 004195 244 GP--RFPR----LHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLL 317 (769)
Q Consensus 244 ~~--~~p~----~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 317 (769)
++ .++. .+++|+.|+|++|.+++.++...+..+++|++|+|++|+++ .+|..+. ++|+.|+|++|++++.
T Consensus 214 ~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~- 289 (312)
T 1wwl_A 214 ETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN- 289 (312)
T ss_dssp CCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-
T ss_pred cchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-
Confidence 84 2222 24799999999999997652256777899999999999998 6777776 8999999999999997
Q ss_pred cccCCCCCCCcEEEccCCcCCC
Q 004195 318 LQNMSCNPQLAFVDLSSNLLTG 339 (769)
Q Consensus 318 ~~~~~~l~~L~~l~l~~N~l~g 339 (769)
|. +..+++|+.|++++|++++
T Consensus 290 p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 290 PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CC-TTTSCEEEEEECTTCTTTC
T ss_pred hh-HhhCCCCCEEeccCCCCCC
Confidence 55 8999999999999999986
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-27 Score=252.76 Aligned_cols=224 Identities=20% Similarity=0.203 Sum_probs=188.8
Q ss_pred EEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCc--cCCccCcCCcCCCEEeccC
Q 004195 116 VLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTG--AVPSELSLLQVLSVLSLKN 193 (769)
Q Consensus 116 ~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~ 193 (769)
.++.++++++ .+|..+. ++|++|+|++|+++...+..|.++++|++|+|++|+++. ..|..+..+++|++|+|++
T Consensus 11 ~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~ 87 (306)
T 2z66_A 11 EIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSF 87 (306)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCS
T ss_pred EEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCC
Confidence 4566666664 3555443 689999999999995444558999999999999999873 3467788899999999999
Q ss_pred CCCcccCCccccCCCCCCEEEccCccccccCC--CCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCch
Q 004195 194 NSLSGFLPVSLTGLQSLRVVSLSANHLSGEIP--DLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPD 271 (769)
Q Consensus 194 N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p--~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~ 271 (769)
|.++ .+|..+.++++|++|++++|++++..+ .+..+++|+.|++++|.+. +.. +.
T Consensus 88 n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~---------------------~~~-~~ 144 (306)
T 2z66_A 88 NGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTR---------------------VAF-NG 144 (306)
T ss_dssp CSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCE---------------------ECS-TT
T ss_pred Cccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCC---------------------ccc-hh
Confidence 9998 467779999999999999999987654 4777777777777776654 222 66
Q ss_pred hhcCCCcCcEEeccCccccc-cCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCC
Q 004195 272 ELRSYNQLQKLDISLNRFVG-PFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAK 350 (769)
Q Consensus 272 ~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~ 350 (769)
.+..+++|++|++++|.+.+ .+|..+..+++|+.|++++|++++..|..+..+++|+.|++++|++++..+..+..+++
T Consensus 145 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 224 (306)
T 2z66_A 145 IFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNS 224 (306)
T ss_dssp TTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTT
T ss_pred hcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCccc
Confidence 78889999999999999987 67888999999999999999999999999999999999999999999988888888999
Q ss_pred CceEECCCCCCChhh
Q 004195 351 TRLVLYSKNCLSNEE 365 (769)
Q Consensus 351 l~~l~l~~N~l~~~~ 365 (769)
++.+++++|.+++..
T Consensus 225 L~~L~L~~N~l~~~~ 239 (306)
T 2z66_A 225 LQVLDYSLNHIMTSK 239 (306)
T ss_dssp CCEEECTTSCCCBCS
T ss_pred CCEeECCCCCCcccC
Confidence 999999999998754
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.9e-27 Score=245.73 Aligned_cols=209 Identities=22% Similarity=0.237 Sum_probs=171.6
Q ss_pred CCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCc-CCccCCccCcCCcCCCEE
Q 004195 111 LSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNK-FTGAVPSELSLLQVLSVL 189 (769)
Q Consensus 111 l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L 189 (769)
.++|+.|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|. ++...|..|..+++|++|
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 3588999999999988777889999999999999999998888899999999999999997 776668889999999999
Q ss_pred eccCCCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCc
Q 004195 190 SLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGL 268 (769)
Q Consensus 190 ~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i 268 (769)
+|++|.+++..|..|.++++|++|++++|++++..+. +..+++|+.|++++|.++ .+
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~----------------------~~ 168 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRIS----------------------SV 168 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC----------------------EE
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCccc----------------------cc
Confidence 9999999988888899999999999999998876655 677777777777777654 22
Q ss_pred CchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCC
Q 004195 269 NPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYL 341 (769)
Q Consensus 269 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~ 341 (769)
.+..+..+++|++|+|++|.+++..|..+..+++|+.|++++|++++..+..+..+++|+.|++++|.+++..
T Consensus 169 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~ 241 (285)
T 1ozn_A 169 PERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDC 241 (285)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSG
T ss_pred CHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCC
Confidence 2445677778888888888888877778888888888888888888776677777888888888888776543
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.95 E-value=5.8e-27 Score=261.90 Aligned_cols=242 Identities=19% Similarity=0.128 Sum_probs=216.3
Q ss_pred cEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCC
Q 004195 115 KVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNN 194 (769)
Q Consensus 115 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 194 (769)
+.++.++++++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 57 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n 133 (452)
T 3zyi_A 57 SKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDN 133 (452)
T ss_dssp CEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred cEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCC
Confidence 45666666664 4666554 68999999999999988999999999999999999999999999999999999999999
Q ss_pred CCcccCCccccCCCCCCEEEccCccccccCC-CCCCCccCcEEeccCCcCCCCCcc----cccCCcEEEeCCccccCCcC
Q 004195 195 SLSGFLPVSLTGLQSLRVVSLSANHLSGEIP-DLRNLKNLRVFDVQDNYFGPRFPR----LHKKMVTLVLRNNRFQFGLN 269 (769)
Q Consensus 195 ~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p-~l~~l~~L~~l~l~~N~l~~~~p~----~~~~L~~L~l~~N~~~~~i~ 269 (769)
.+++..+..|.++++|++|+|++|++++..+ .+.++++|+.|++++|...+.++. .+.+|+.|+|++|.+++ +
T Consensus 134 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~- 211 (452)
T 3zyi_A 134 WLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-M- 211 (452)
T ss_dssp CCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-C-
T ss_pred cCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-c-
Confidence 9998888889999999999999999997666 388999999999999655444443 35789999999999985 3
Q ss_pred chhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccC
Q 004195 270 PDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEA 349 (769)
Q Consensus 270 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~ 349 (769)
| .+..+++|++|+|++|.+++..|..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..+..++
T Consensus 212 ~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 290 (452)
T 3zyi_A 212 P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLR 290 (452)
T ss_dssp C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCT
T ss_pred c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcccc
Confidence 3 588999999999999999999999999999999999999999999999999999999999999999998888889999
Q ss_pred CCceEECCCCCCC
Q 004195 350 KTRLVLYSKNCLS 362 (769)
Q Consensus 350 ~l~~l~l~~N~l~ 362 (769)
+++.+++++|.+.
T Consensus 291 ~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 291 YLVELHLHHNPWN 303 (452)
T ss_dssp TCCEEECCSSCEE
T ss_pred CCCEEEccCCCcC
Confidence 9999999999654
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-26 Score=250.62 Aligned_cols=243 Identities=20% Similarity=0.261 Sum_probs=198.0
Q ss_pred cCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCC
Q 004195 108 LGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLS 187 (769)
Q Consensus 108 ~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 187 (769)
+.++++|++|+|++|.++. + +.+.++++|++|+|++|.+++ +|. +..+++|++|++++|.....++ .+..+++|+
T Consensus 84 ~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~ 158 (347)
T 4fmz_A 84 LSNLVKLTNLYIGTNKITD-I-SALQNLTNLRELYLNEDNISD-ISP-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLN 158 (347)
T ss_dssp GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCSEEECTTSCCCC-CGG-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCC
T ss_pred hhcCCcCCEEEccCCcccC-c-hHHcCCCcCCEEECcCCcccC-chh-hccCCceeEEECCCCCCccccc-chhhCCCCc
Confidence 7888999999999998876 3 368899999999999999985 444 8889999999999997664444 488899999
Q ss_pred EEeccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCc-ccccCCcEEEeCCccccC
Q 004195 188 VLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFP-RLHKKMVTLVLRNNRFQF 266 (769)
Q Consensus 188 ~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p-~~~~~L~~L~l~~N~~~~ 266 (769)
+|++++|.+++..+ +.++++|+.|++++|.+++..+ +..+++|+.+++++|.+.+..+ ..+++|+.|++++|.++.
T Consensus 159 ~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~L~~L~l~~n~l~~ 235 (347)
T 4fmz_A 159 YLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP-LASLTSLHYFTAYVNQITDITPVANMTRLNSLKIGNNKITD 235 (347)
T ss_dssp EEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG-GGGCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCC
T ss_pred EEEecCCCcCCchh--hccCCCCCEEEccCCccccccc-ccCCCccceeecccCCCCCCchhhcCCcCCEEEccCCccCC
Confidence 99999998886544 7888999999999998876444 7888889999999998876654 235788899999998875
Q ss_pred CcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCcccc
Q 004195 267 GLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQ 346 (769)
Q Consensus 267 ~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~ 346 (769)
. +. +..+++|++|++++|.+++. +.+..+++|+.|++++|++++. ..+..+++|+.|++++|.+++..|..+.
T Consensus 236 ~--~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~ 308 (347)
T 4fmz_A 236 L--SP-LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIG 308 (347)
T ss_dssp C--GG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHH
T ss_pred C--cc-hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhh
Confidence 3 33 88888899999999888773 5688888899999999988875 4577888899999999988888888888
Q ss_pred ccCCCceEECCCCCCChhh
Q 004195 347 VEAKTRLVLYSKNCLSNEE 365 (769)
Q Consensus 347 ~~~~l~~l~l~~N~l~~~~ 365 (769)
.+++++.+++++|.+++..
T Consensus 309 ~l~~L~~L~L~~n~l~~~~ 327 (347)
T 4fmz_A 309 GLTNLTTLFLSQNHITDIR 327 (347)
T ss_dssp TCTTCSEEECCSSSCCCCG
T ss_pred ccccCCEEEccCCcccccc
Confidence 8888889999988887654
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-26 Score=258.75 Aligned_cols=242 Identities=19% Similarity=0.155 Sum_probs=215.8
Q ss_pred cEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCC
Q 004195 115 KVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNN 194 (769)
Q Consensus 115 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 194 (769)
+.++.++++++ .+|..+. +++++|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 46 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 122 (440)
T 3zyj_A 46 SKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDN 122 (440)
T ss_dssp CEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCC
Confidence 34555566663 4676554 68999999999999988899999999999999999999888899999999999999999
Q ss_pred CCcccCCccccCCCCCCEEEccCccccccCC-CCCCCccCcEEeccCCcCCCCCcc----cccCCcEEEeCCccccCCcC
Q 004195 195 SLSGFLPVSLTGLQSLRVVSLSANHLSGEIP-DLRNLKNLRVFDVQDNYFGPRFPR----LHKKMVTLVLRNNRFQFGLN 269 (769)
Q Consensus 195 ~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p-~l~~l~~L~~l~l~~N~l~~~~p~----~~~~L~~L~l~~N~~~~~i~ 269 (769)
++++..+..|.++++|++|+|++|++++..+ .+..+++|+.|++++|...+.++. .+.+|+.|+|++|.++ .+
T Consensus 123 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~- 200 (440)
T 3zyj_A 123 RLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EI- 200 (440)
T ss_dssp CCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SC-
T ss_pred cCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-cc-
Confidence 9998777889999999999999999997766 488999999999999655554443 2578999999999998 44
Q ss_pred chhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccC
Q 004195 270 PDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEA 349 (769)
Q Consensus 270 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~ 349 (769)
| .+..+++|++|+|++|++++..|..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..+..++
T Consensus 201 ~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 279 (440)
T 3zyj_A 201 P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLH 279 (440)
T ss_dssp C-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCT
T ss_pred c-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhcccc
Confidence 4 588999999999999999999899999999999999999999999999999999999999999999998888889999
Q ss_pred CCceEECCCCCCC
Q 004195 350 KTRLVLYSKNCLS 362 (769)
Q Consensus 350 ~l~~l~l~~N~l~ 362 (769)
+++.+++++|.+.
T Consensus 280 ~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 280 HLERIHLHHNPWN 292 (440)
T ss_dssp TCCEEECCSSCEE
T ss_pred CCCEEEcCCCCcc
Confidence 9999999999764
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.4e-26 Score=247.67 Aligned_cols=239 Identities=20% Similarity=0.286 Sum_probs=128.3
Q ss_pred cCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCC
Q 004195 108 LGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLS 187 (769)
Q Consensus 108 ~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 187 (769)
+..+++|++|+|++|.+++. |. +.++++|++|+|++|.++. +| .|.++++|++|+|++|.+++. |. +..+++|+
T Consensus 62 ~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~L~l~~n~i~~~-~~-~~~l~~L~ 135 (347)
T 4fmz_A 62 IEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRELYLNEDNISDI-SP-LANLTKMY 135 (347)
T ss_dssp GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEECTTSCCCCC-GG-GTTCTTCC
T ss_pred hhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCEEECcCCcccCc-hh-hccCCcee
Confidence 44555666666666655433 22 5556666666666665553 22 455566666666666655532 22 55556666
Q ss_pred EEeccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCc-ccccCCcEEEeCCccccC
Q 004195 188 VLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFP-RLHKKMVTLVLRNNRFQF 266 (769)
Q Consensus 188 ~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p-~~~~~L~~L~l~~N~~~~ 266 (769)
+|++++|.....++ .+.++++|++|++++|.+.+..+ +..+++|+.|++++|.+.+..+ ..+.+|+.|++++|.+..
T Consensus 136 ~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~ 213 (347)
T 4fmz_A 136 SLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP-IANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITD 213 (347)
T ss_dssp EEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG-GGGCTTCSEEECTTSCCCCCGGGGGCTTCCEEECCSSCCCC
T ss_pred EEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh-hccCCCCCEEEccCCcccccccccCCCccceeecccCCCCC
Confidence 66666654443332 25555666666666665554333 5555566666666665554332 123455566666665553
Q ss_pred CcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCcccc
Q 004195 267 GLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQ 346 (769)
Q Consensus 267 ~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~ 346 (769)
.. + +..+++|++|++++|.+++..+ +..+++|+.|++++|.+++. ..+..+++|+.|++++|.+++. +.+.
T Consensus 214 ~~-~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~ 284 (347)
T 4fmz_A 214 IT-P--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLN 284 (347)
T ss_dssp CG-G--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGG
T ss_pred Cc-h--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhc
Confidence 21 1 5555566666666665554322 55555666666666655553 3455555666666666655543 2344
Q ss_pred ccCCCceEECCCCCCCh
Q 004195 347 VEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 347 ~~~~l~~l~l~~N~l~~ 363 (769)
.+++++.+++++|.+++
T Consensus 285 ~l~~L~~L~L~~n~l~~ 301 (347)
T 4fmz_A 285 NLSQLNSLFLNNNQLGN 301 (347)
T ss_dssp GCTTCSEEECCSSCCCG
T ss_pred CCCCCCEEECcCCcCCC
Confidence 55555666666665544
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-26 Score=257.03 Aligned_cols=254 Identities=22% Similarity=0.193 Sum_probs=166.3
Q ss_pred CCeeEEEeCCCCCCCCCCCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCcc
Q 004195 76 DNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQ 155 (769)
Q Consensus 76 ~~v~~l~l~~~~~~~~~~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~ 155 (769)
.+++.|+++++.+.+. | .++.+++|++|+|++|++++. | ++++++|++|+|++|++++. |
T Consensus 42 ~~L~~L~Ls~n~l~~~-------------~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~-- 101 (457)
T 3bz5_A 42 ATLTSLDCHNSSITDM-------------T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D-- 101 (457)
T ss_dssp TTCCEEECCSSCCCCC-------------T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--
T ss_pred CCCCEEEccCCCcccC-------------h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--
Confidence 4677888776654421 2 466677777777777777663 3 77777777777777777753 3
Q ss_pred ccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcE
Q 004195 156 ISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRV 235 (769)
Q Consensus 156 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~ 235 (769)
++++++|++|+|++|++++ +| ++.+++|++|++++|++++. + ++++++|++|++++|+..+.+ .+..+++|+.
T Consensus 102 ~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~-~~~~l~~L~~ 174 (457)
T 3bz5_A 102 VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL-DVTPQTQLTT 174 (457)
T ss_dssp CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC-CCTTCTTCCE
T ss_pred cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc-ccccCCcCCE
Confidence 7777777777777777775 34 67777777777777777763 2 667777777777777655555 4666777777
Q ss_pred EeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCc
Q 004195 236 FDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTG 315 (769)
Q Consensus 236 l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 315 (769)
|++++|.+++.....+++|+.|++++|.+++. .+..+++|++|++++|++++ +| +..+++|+.|++++|++++
T Consensus 175 L~ls~n~l~~l~l~~l~~L~~L~l~~N~l~~~----~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~ 247 (457)
T 3bz5_A 175 LDCSFNKITELDVSQNKLLNRLNCDTNNITKL----DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTE 247 (457)
T ss_dssp EECCSSCCCCCCCTTCTTCCEEECCSSCCSCC----CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC
T ss_pred EECCCCccceeccccCCCCCEEECcCCcCCee----ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCC
Confidence 77777777664333356677777777777642 26667777777777777776 33 6667777777777777777
Q ss_pred cccccCCCCC-------CCcEEEccCCcCCCCCCccccccCCCceEECCCCCCChhh
Q 004195 316 LLLQNMSCNP-------QLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSNEE 365 (769)
Q Consensus 316 ~~~~~~~~l~-------~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~~~ 365 (769)
..+..+..+. +|+.|++++|.+.|.+| +..+++++.+++++|...+..
T Consensus 248 ~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l 302 (457)
T 3bz5_A 248 LDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLL 302 (457)
T ss_dssp CCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEE
T ss_pred cCHHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCccccee
Confidence 6544444433 44555555565555555 234556666666666554443
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.1e-26 Score=255.44 Aligned_cols=266 Identities=20% Similarity=0.185 Sum_probs=147.2
Q ss_pred CCeeEEEeCCCCCCCCC---------CCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCc
Q 004195 76 DNLTQLHIAGDNNNNIN---------GGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSN 146 (769)
Q Consensus 76 ~~v~~l~l~~~~~~~~~---------~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N 146 (769)
.+++.|+++++.+...+ .++++|.+.+. .++++++|++|+|++|++++ +| ++++++|++|++++|
T Consensus 64 ~~L~~L~Ls~n~l~~~~~~~l~~L~~L~Ls~N~l~~~---~~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N 137 (457)
T 3bz5_A 64 TGLTKLICTSNNITTLDLSQNTNLTYLACDSNKLTNL---DVTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARN 137 (457)
T ss_dssp TTCSEEECCSSCCSCCCCTTCTTCSEEECCSSCCSCC---CCTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTS
T ss_pred CCCCEEEccCCcCCeEccccCCCCCEEECcCCCCcee---ecCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCC
Confidence 46888888887655421 12233333332 15555555555555555554 22 555555555555555
Q ss_pred ccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCC
Q 004195 147 YLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD 226 (769)
Q Consensus 147 ~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~ 226 (769)
++++ +| ++++++|++|++++|+..+.+ .++.+++|++|++++|++++ +| ++.+++|+.|++++|++++. .
T Consensus 138 ~l~~-l~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~--~ 207 (457)
T 3bz5_A 138 TLTE-ID--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL--D 207 (457)
T ss_dssp CCSC-CC--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC--C
T ss_pred ccce-ec--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee--c
Confidence 5554 22 555555555555555444344 25555566666666666554 23 55556666666666666553 3
Q ss_pred CCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCC-------cCcEEeccCccccccCCccCCC
Q 004195 227 LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYN-------QLQKLDISLNRFVGPFIPSLLS 299 (769)
Q Consensus 227 l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~-------~L~~L~Ls~N~l~~~~~~~~~~ 299 (769)
++.+++|+.|++++|.+++.....+++|+.|++++|.+++. ++..+..+. +|+.|++++|.+.+.+| ++.
T Consensus 208 l~~l~~L~~L~Ls~N~l~~ip~~~l~~L~~L~l~~N~l~~~-~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~ 284 (457)
T 3bz5_A 208 LNQNIQLTFLDCSSNKLTEIDVTPLTQLTYFDCSVNPLTEL-DVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEG 284 (457)
T ss_dssp CTTCTTCSEEECCSSCCSCCCCTTCTTCSEEECCSSCCSCC-CCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTT
T ss_pred cccCCCCCEEECcCCcccccCccccCCCCEEEeeCCcCCCc-CHHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccc
Confidence 55556666666666666553222245566666666666542 233333332 34445555555545444 345
Q ss_pred CCCCCEEEccCCcCCccccc--------cCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCCh
Q 004195 300 LPSITYLDIHGNKLTGLLLQ--------NMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 300 l~~L~~L~l~~N~l~~~~~~--------~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 363 (769)
+++|+.|++++|.+.+.+|. .++.+++|+.|++++|++++. | +..+++++.+++++|++++
T Consensus 285 l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~ 353 (457)
T 3bz5_A 285 CRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD 353 (457)
T ss_dssp CTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB
T ss_pred cccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC
Confidence 56666777777666555543 244556677777777777763 3 6666777777777777765
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.2e-26 Score=268.54 Aligned_cols=133 Identities=25% Similarity=0.241 Sum_probs=120.8
Q ss_pred CCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEec
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL 191 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 191 (769)
+++++|||++|+|++..|..|.++++|++|||++|+|++..|..|.+|++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 47899999999999888899999999999999999999888889999999999999999999888889999999999999
Q ss_pred cCCCCcccCCccccCCCCCCEEEccCcccccc-CCC-CCCCccCcEEeccCCcCC
Q 004195 192 KNNSLSGFLPVSLTGLQSLRVVSLSANHLSGE-IPD-LRNLKNLRVFDVQDNYFG 244 (769)
Q Consensus 192 ~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~-~p~-l~~l~~L~~l~l~~N~l~ 244 (769)
++|++++..+..|+++++|++|+|++|.+++. +|. ++.+++|+.|++++|.++
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~ 186 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ 186 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCC
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccc
Confidence 99999988888999999999999999999764 444 677888888888877654
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=6.2e-29 Score=283.63 Aligned_cols=182 Identities=8% Similarity=0.049 Sum_probs=124.4
Q ss_pred CccccCCceeEEEEEe-CCCcEEEEEEccccCCC----------ChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCC
Q 004195 486 SFMCDASHGQIYKGKL-TDGTLVAIRSLKMSKKS----------SPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~~----------~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~ 553 (769)
...+.|+.|.++.++. -.|+.||||.+...... ..++|.+|+++|+++ .|+||+++++++.+..
T Consensus 240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~---- 315 (569)
T 4azs_A 240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQ---- 315 (569)
T ss_dssp CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSS----
T ss_pred hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECC----
Confidence 3456677777777653 35899999999754211 124689999999999 6999999999998744
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
..||||||++|++|.+++.+.+ +++.. +|+.||+.||+|+|++ |||||||||+|||+++++++||+|||+
T Consensus 316 ---~~yLVMEyv~G~~L~d~i~~~~-~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGl 385 (569)
T 4azs_A 316 ---SGWLVMEKLPGRLLSDMLAAGE-EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGS 385 (569)
T ss_dssp ---EEEEEEECCCSEEHHHHHHTTC-CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTT
T ss_pred ---EEEEEEecCCCCcHHHHHHhCC-CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeeccc
Confidence 3899999999999999998665 56654 5889999999999999 999999999999999999999999999
Q ss_pred chhhhccC--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCC
Q 004195 634 PLLAEARG--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGR 682 (769)
Q Consensus 634 a~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~ 682 (769)
|+...... ..+..++..|++||.+. +.+..++|+||+|++++++.++.
T Consensus 386 Ar~~~~~~~~~~t~vGTp~YmAPE~l~-g~~~~~~d~~s~g~~~~~l~~~~ 435 (569)
T 4azs_A 386 IVTTPQDCSWPTNLVQSFFVFVNELFA-ENKSWNGFWRSAPVHPFNLPQPW 435 (569)
T ss_dssp EESCC---CCSHHHHHHHHHHHHHHC------------------CCCCTTH
T ss_pred CeeCCCCCccccCceechhhccHHHhC-CCCCCcccccccccchhhhcccc
Confidence 97654332 22334556677888775 46778999999999998886654
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=99.94 E-value=5.5e-26 Score=255.01 Aligned_cols=266 Identities=25% Similarity=0.311 Sum_probs=155.7
Q ss_pred CCeeEEEeCCCCCCCCC----------CCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccC
Q 004195 76 DNLTQLHIAGDNNNNIN----------GGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSS 145 (769)
Q Consensus 76 ~~v~~l~l~~~~~~~~~----------~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~ 145 (769)
.+++.|+++++.+...+ ..+++|.+.+..+ ++++++|++|+|++|.+++.. . +.++++|++|+|++
T Consensus 68 ~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~-~-~~~l~~L~~L~l~~ 143 (466)
T 1o6v_A 68 NNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDID-P-LKNLTNLNRLELSS 143 (466)
T ss_dssp TTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCG-G-GTTCTTCSEEEEEE
T ss_pred cCCCEEECCCCccCCchhhhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCCh-H-HcCCCCCCEEECCC
Confidence 46788888777654421 1223343333332 666666666666666665432 2 66666666666666
Q ss_pred cccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCC
Q 004195 146 NYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIP 225 (769)
Q Consensus 146 N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p 225 (769)
|.+++ +| .++.+++|+.|+++ |.+.+. + .+.++++|++|++++|.+++. ..+.++++|+.|++++|.+++..|
T Consensus 144 n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~-~-~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~ 216 (466)
T 1o6v_A 144 NTISD-IS-ALSGLTSLQQLSFG-NQVTDL-K-PLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP 216 (466)
T ss_dssp EEECC-CG-GGTTCTTCSEEEEE-ESCCCC-G-GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG
T ss_pred CccCC-Ch-hhccCCcccEeecC-CcccCc-h-hhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc
Confidence 66654 23 24444444444443 222221 1 266667777777777776643 246667777777777777766544
Q ss_pred CCCCCccCcEEeccCCcCCCCCcc--cccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCC
Q 004195 226 DLRNLKNLRVFDVQDNYFGPRFPR--LHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSI 303 (769)
Q Consensus 226 ~l~~l~~L~~l~l~~N~l~~~~p~--~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 303 (769)
++.+++|+.|++++|.+.+. +. .+++|+.|++++|.+++.. + +..+++|++|++++|.+++..+ +..+++|
T Consensus 217 -~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~~~~-~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L 289 (466)
T 1o6v_A 217 -LGILTNLDELSLNGNQLKDI-GTLASLTNLTDLDLANNQISNLA-P--LSGLTKLTELKLGANQISNISP--LAGLTAL 289 (466)
T ss_dssp -GGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCG-G--GTTCTTCSEEECCSSCCCCCGG--GTTCTTC
T ss_pred -ccccCCCCEEECCCCCcccc-hhhhcCCCCCEEECCCCccccch-h--hhcCCCCCEEECCCCccCcccc--ccCCCcc
Confidence 56666677777777766543 22 2456666666666666432 2 6666666666666666665332 5666666
Q ss_pred CEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCCh
Q 004195 304 TYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 304 ~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 363 (769)
+.|++++|++++..+ +..+++|+.|++++|++++..| +..+++++.+++++|.+++
T Consensus 290 ~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~ 345 (466)
T 1o6v_A 290 TNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSD 345 (466)
T ss_dssp SEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred CeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCC
Confidence 666666666666443 5566666666666666666554 4455666666666666554
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=99.94 E-value=6.5e-26 Score=254.40 Aligned_cols=269 Identities=23% Similarity=0.273 Sum_probs=205.6
Q ss_pred CeeEEEeCCCCCCCCC----------CCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCc
Q 004195 77 NLTQLHIAGDNNNNIN----------GGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSN 146 (769)
Q Consensus 77 ~v~~l~l~~~~~~~~~----------~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N 146 (769)
+++.|++.++.....+ .++++|.+.+..+ +.++++|++|+|++|.+++..| ++++++|++|+|++|
T Consensus 47 ~l~~L~l~~~~i~~l~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n 122 (466)
T 1o6v_A 47 QVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 122 (466)
T ss_dssp TCCEEECCSSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred cccEEecCCCCCccCcchhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCC
Confidence 5677777665543321 2344454444433 6677777777777777765443 677777777777777
Q ss_pred ccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCC
Q 004195 147 YLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD 226 (769)
Q Consensus 147 ~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~ 226 (769)
.+++. |. +.++++|++|+|++|.+++ +| .++.+++|++|+++ |.+.+.. .+.++++|+.|++++|.+++ ++.
T Consensus 123 ~l~~~-~~-~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~-~~~ 194 (466)
T 1o6v_A 123 QITDI-DP-LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSD-ISV 194 (466)
T ss_dssp CCCCC-GG-GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCC-CGG
T ss_pred CCCCC-hH-HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCC-Chh
Confidence 77643 32 6777777777777777664 33 36677777777775 4444332 38899999999999999986 456
Q ss_pred CCCCccCcEEeccCCcCCCCCcc-cccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCE
Q 004195 227 LRNLKNLRVFDVQDNYFGPRFPR-LHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITY 305 (769)
Q Consensus 227 l~~l~~L~~l~l~~N~l~~~~p~-~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 305 (769)
+..+++|+.|++++|.+.+..|- .+++|+.|++++|.++. + ..+..+++|+.|++++|.+.+..+ +..+++|+.
T Consensus 195 l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~-~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~ 269 (466)
T 1o6v_A 195 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKD-I--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTE 269 (466)
T ss_dssp GGGCTTCSEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCC-C--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSE
T ss_pred hccCCCCCEEEecCCcccccccccccCCCCEEECCCCCccc-c--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCE
Confidence 88999999999999999887663 36799999999999985 3 468899999999999999998554 889999999
Q ss_pred EEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCChhhh
Q 004195 306 LDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSNEEQ 366 (769)
Q Consensus 306 L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~~~~ 366 (769)
|++++|++++..+ +..+++|+.|++++|++++..| +..+++++.+++++|.+++..+
T Consensus 270 L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~ 326 (466)
T 1o6v_A 270 LKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP 326 (466)
T ss_dssp EECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG
T ss_pred EECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh
Confidence 9999999998655 8889999999999999998665 7788999999999999987653
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-25 Score=250.02 Aligned_cols=221 Identities=29% Similarity=0.357 Sum_probs=112.0
Q ss_pred CCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEec
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL 191 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 191 (769)
++|++|+|++|++++ +| .|+++++|++|++++|++++ +|..+ .+|++|+|++|++++ +| .|+++++|++|++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 355555555555544 44 35555555555555555553 34322 245555555555553 33 3555555555555
Q ss_pred cCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCC-------------------Cccccc
Q 004195 192 KNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPR-------------------FPRLHK 252 (769)
Q Consensus 192 ~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~-------------------~p~~~~ 252 (769)
++|++++ +|... ++|++|++++|+++ .+|.++.+++|+.|++++|.+++. +|....
T Consensus 203 ~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp~~~~l~~L~~L~l~~N~l~~l~~~~~~L~~L~l~~N~l~~l~~~~~ 277 (454)
T 1jl5_A 203 DNNSLKK-LPDLP---LSLESIVAGNNILE-ELPELQNLPFLTTIYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQ 277 (454)
T ss_dssp CSSCCSS-CCCCC---TTCCEEECCSSCCS-SCCCCTTCTTCCEEECCSSCCSSCCSCCTTCCEEECCSSCCSCCCCCCT
T ss_pred CCCcCCc-CCCCc---CcccEEECcCCcCC-cccccCCCCCCCEEECCCCcCCcccccccccCEEECCCCcccccCcccC
Confidence 5555543 22211 24445555555444 334444444455555544444431 233334
Q ss_pred CCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCC-CCCCEEEccCCcCCccccccCCCCCCCcEEE
Q 004195 253 KMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSL-PSITYLDIHGNKLTGLLLQNMSCNPQLAFVD 331 (769)
Q Consensus 253 ~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l-~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~ 331 (769)
+|+.|++++|.+++ + |.. .++|++|++++|++++ +..+ ++|+.|++++|++++ +|.. +++|+.|+
T Consensus 278 ~L~~L~ls~N~l~~-l-~~~---~~~L~~L~l~~N~l~~-----i~~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~ 343 (454)
T 1jl5_A 278 SLTFLDVSENIFSG-L-SEL---PPNLYYLNASSNEIRS-----LCDLPPSLEELNVSNNKLIE-LPAL---PPRLERLI 343 (454)
T ss_dssp TCCEEECCSSCCSE-E-SCC---CTTCCEEECCSSCCSE-----ECCCCTTCCEEECCSSCCSC-CCCC---CTTCCEEE
T ss_pred cCCEEECcCCccCc-c-cCc---CCcCCEEECcCCcCCc-----ccCCcCcCCEEECCCCcccc-cccc---CCcCCEEE
Confidence 44444444444443 1 100 1234444444444433 1122 467777777777776 4433 46777777
Q ss_pred ccCCcCCCCCCccccccCCCceEECCCCCCCh
Q 004195 332 LSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 332 l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 363 (769)
+++|++++ +|. .+++++.+++++|.+++
T Consensus 344 L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~ 371 (454)
T 1jl5_A 344 ASFNHLAE-VPE---LPQNLKQLHVEYNPLRE 371 (454)
T ss_dssp CCSSCCSC-CCC---CCTTCCEEECCSSCCSS
T ss_pred CCCCcccc-ccc---hhhhccEEECCCCCCCc
Confidence 77777774 554 35667777777777766
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=5.1e-26 Score=237.97 Aligned_cols=224 Identities=23% Similarity=0.238 Sum_probs=194.8
Q ss_pred cEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCC
Q 004195 115 KVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNN 194 (769)
Q Consensus 115 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 194 (769)
+.++.++++++ .+|..+ .++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 34566666664 345444 468999999999999877788999999999999999999888999999999999999999
Q ss_pred C-CcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchh
Q 004195 195 S-LSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDE 272 (769)
Q Consensus 195 ~-l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~ 272 (769)
. ++...|..|.++++|++|++++|.+++..|. +..+++|+.|++++|.++ .+.+..
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~----------------------~~~~~~ 148 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ----------------------ALPDDT 148 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC----------------------CCCTTT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCccc----------------------ccCHhH
Confidence 7 8877788999999999999999999987665 777888888888777664 233556
Q ss_pred hcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCc
Q 004195 273 LRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTR 352 (769)
Q Consensus 273 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~ 352 (769)
+..+++|++|+|++|++++..+..+..+++|+.|++++|++++..|..+..+++|+.|++++|++++..+..+..+++++
T Consensus 149 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 228 (285)
T 1ozn_A 149 FRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQ 228 (285)
T ss_dssp TTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCC
T ss_pred hccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccC
Confidence 88899999999999999987777899999999999999999999999999999999999999999998888899999999
Q ss_pred eEECCCCCCCh
Q 004195 353 LVLYSKNCLSN 363 (769)
Q Consensus 353 ~l~l~~N~l~~ 363 (769)
.+++++|.+..
T Consensus 229 ~L~l~~N~~~c 239 (285)
T 1ozn_A 229 YLRLNDNPWVC 239 (285)
T ss_dssp EEECCSSCEEC
T ss_pred EEeccCCCccC
Confidence 99999998754
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.1e-27 Score=253.55 Aligned_cols=247 Identities=22% Similarity=0.193 Sum_probs=207.8
Q ss_pred CCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCc
Q 004195 95 LAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTG 174 (769)
Q Consensus 95 l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~ 174 (769)
+++|.+.+..+..|.++++|++|+|++|++++..|..|+++++|++|+|++|++++..+..|+++++|++|+|++|++++
T Consensus 59 l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 138 (353)
T 2z80_A 59 LSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKT 138 (353)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSS
T ss_pred CCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcc
Confidence 33444444445578999999999999999999889999999999999999999997555569999999999999999995
Q ss_pred cCC-ccCcCCcCCCEEeccCC-CCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCCCcc--
Q 004195 175 AVP-SELSLLQVLSVLSLKNN-SLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPR-- 249 (769)
Q Consensus 175 ~~p-~~~~~l~~L~~L~L~~N-~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p~-- 249 (769)
..+ ..|.++++|++|++++| .+++..|..|.++++|+.|++++|++++..|. +..+++|+.|++++|.+....+.
T Consensus 139 l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~ 218 (353)
T 2z80_A 139 LGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFV 218 (353)
T ss_dssp SCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHH
T ss_pred cCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhh
Confidence 444 48999999999999999 57777788999999999999999999998664 89999999999999998643332
Q ss_pred -cccCCcEEEeCCccccCCcCchhh---cCCCcCcEEeccCccccc----cCCccCCCCCCCCEEEccCCcCCccccccC
Q 004195 250 -LHKKMVTLVLRNNRFQFGLNPDEL---RSYNQLQKLDISLNRFVG----PFIPSLLSLPSITYLDIHGNKLTGLLLQNM 321 (769)
Q Consensus 250 -~~~~L~~L~l~~N~~~~~i~p~~~---~~l~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 321 (769)
..++|+.|++++|.+++.. +..+ ...+.++.++|++|.+.+ .+|..+..+++|+.|+|++|+++...+..+
T Consensus 219 ~~~~~L~~L~L~~n~l~~~~-~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~ 297 (353)
T 2z80_A 219 DVTSSVECLELRDTDLDTFH-FSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIF 297 (353)
T ss_dssp HHTTTEEEEEEESCBCTTCC-CC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTT
T ss_pred hhcccccEEECCCCcccccc-ccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHH
Confidence 2578999999999998643 3333 346678899999998876 367778899999999999999996555557
Q ss_pred CCCCCCcEEEccCCcCCCCCC
Q 004195 322 SCNPQLAFVDLSSNLLTGYLP 342 (769)
Q Consensus 322 ~~l~~L~~l~l~~N~l~g~~p 342 (769)
..+++|+.|+|++|.+++..|
T Consensus 298 ~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 298 DRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp TTCTTCCEEECCSSCBCCCHH
T ss_pred hcCCCCCEEEeeCCCccCcCC
Confidence 899999999999999998766
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=99.94 E-value=4.2e-25 Score=246.06 Aligned_cols=224 Identities=28% Similarity=0.366 Sum_probs=175.2
Q ss_pred CCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEe
Q 004195 111 LSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLS 190 (769)
Q Consensus 111 l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 190 (769)
+++|+.|++++|++++ +|.. .++|++|+|++|++++ +| +|+++++|++|++++|++++ +|..+ .+|++|+
T Consensus 110 ~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~ 179 (454)
T 1jl5_A 110 PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIA 179 (454)
T ss_dssp CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEE
T ss_pred cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEE
Confidence 4789999999999976 3321 1689999999999996 78 69999999999999999995 67654 5899999
Q ss_pred ccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCccc--ccCCcEEEeCCccccCCc
Q 004195 191 LKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRL--HKKMVTLVLRNNRFQFGL 268 (769)
Q Consensus 191 L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~--~~~L~~L~l~~N~~~~~i 268 (769)
|++|++++ +| .++++++|++|++++|++++ +|.+. ++|+.|++++|.+. .+|.. +++|++|++++|++++ +
T Consensus 180 L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~--~~L~~L~l~~n~l~-~lp~~~~l~~L~~L~l~~N~l~~-l 252 (454)
T 1jl5_A 180 AGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP--LSLESIVAGNNILE-ELPELQNLPFLTTIYADNNLLKT-L 252 (454)
T ss_dssp CCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC--TTCCEEECCSSCCS-SCCCCTTCTTCCEEECCSSCCSS-C
T ss_pred CcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc--CcccEEECcCCcCC-cccccCCCCCCCEEECCCCcCCc-c
Confidence 99999997 56 69999999999999999997 44432 58999999999998 56654 5688999999999985 4
Q ss_pred CchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCc--cccccC-------------CCC-CCCcEEEc
Q 004195 269 NPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTG--LLLQNM-------------SCN-PQLAFVDL 332 (769)
Q Consensus 269 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~--~~~~~~-------------~~l-~~L~~l~l 332 (769)
|.. +++|++|++++|++++ +|.. +++|+.|++++|++++ .+|..+ ..+ ++|+.|++
T Consensus 253 -~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~~~~~~L~~L~l~~N~l~~i~~~~~~L~~L~L 324 (454)
T 1jl5_A 253 -PDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNV 324 (454)
T ss_dssp -CSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSEECCCCTTCCEEEC
T ss_pred -ccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcccCcCCcCCEEECcCCcCCcccCCcCcCCEEEC
Confidence 432 3678888888888876 4432 2566777777777666 222221 122 47899999
Q ss_pred cCCcCCCCCCccccccCCCceEECCCCCCCh
Q 004195 333 SSNLLTGYLPSCLQVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 333 ~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 363 (769)
++|++++ +|.. +++++.+++++|.++.
T Consensus 325 s~N~l~~-lp~~---~~~L~~L~L~~N~l~~ 351 (454)
T 1jl5_A 325 SNNKLIE-LPAL---PPRLERLIASFNHLAE 351 (454)
T ss_dssp CSSCCSC-CCCC---CTTCCEEECCSSCCSC
T ss_pred CCCcccc-cccc---CCcCCEEECCCCcccc
Confidence 9999987 5654 4678999999999875
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=7.5e-26 Score=235.51 Aligned_cols=208 Identities=23% Similarity=0.186 Sum_probs=166.6
Q ss_pred CCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEec
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL 191 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 191 (769)
++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 47899999999998877778999999999999999999777778999999999999999999888888999999999999
Q ss_pred cCCCCcccCCccccCCCCCCEEEccCcccccc-CC-CCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcC
Q 004195 192 KNNSLSGFLPVSLTGLQSLRVVSLSANHLSGE-IP-DLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLN 269 (769)
Q Consensus 192 ~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~-~p-~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~ 269 (769)
++|.+++..+..++++++|++|++++|++++. +| .+..+++|+.|++++|.+++. .
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~----------------------~ 165 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI----------------------Y 165 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEE----------------------C
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcC----------------------C
Confidence 99999987777888999999999999998763 34 467777777777777766532 2
Q ss_pred chhhcCCCcCc----EEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCC
Q 004195 270 PDELRSYNQLQ----KLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLP 342 (769)
Q Consensus 270 p~~~~~l~~L~----~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p 342 (769)
+..+..+++|+ .|++++|.+++..+..+ ...+|+.|+|++|++++..+..+..+++|+.|++++|.+++..|
T Consensus 166 ~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~-~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 166 CTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp GGGGHHHHTCTTCCEEEECCSSCCCEECTTSS-CSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred HHHhhhhhhccccceeeecCCCcccccCcccc-CCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 34444444454 78888888877544444 34478888888888888777777888888888888888886554
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-25 Score=258.00 Aligned_cols=278 Identities=24% Similarity=0.249 Sum_probs=196.0
Q ss_pred CCCCCCCCCCCCCCCCCC---CCcceEecCCCeeEEEeCCCCCCCCCCCC---------CCCCCCCccccccCCCCCCcE
Q 004195 49 SSSFNTTTVTDFCNIEPT---PSLTLVCYEDNLTQLHIAGDNNNNINGGL---------AHNFSTDTFFSTLGSLSSLKV 116 (769)
Q Consensus 49 l~~w~~~~~~~~c~~~~~---~~~~v~C~~~~v~~l~l~~~~~~~~~~~l---------~~n~~~~~~~~~~~~l~~L~~ 116 (769)
.+.|.... ++|.|.+. -.....|...+++.|+++++.+..++..+ ++|.++ .+|. .+++|++
T Consensus 12 w~~W~~~~--~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~~lp~~l~~~L~~L~L~~N~l~-~lp~---~l~~L~~ 85 (622)
T 3g06_A 12 WSAWRRAA--PAEESRGRAAVVQKMRACLNNGNAVLNVGESGLTTLPDCLPAHITTLVIPDNNLT-SLPA---LPPELRT 85 (622)
T ss_dssp HHHHHHTC--CGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCSCCCSCCCTTCSEEEECSCCCS-CCCC---CCTTCCE
T ss_pred HHHHHhcC--CcchhccccccCcccccccCCCCcEEEecCCCcCccChhhCCCCcEEEecCCCCC-CCCC---cCCCCCE
Confidence 34575544 67777420 00113344456888888887766443222 223333 2232 4567777
Q ss_pred EEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCC
Q 004195 117 LSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSL 196 (769)
Q Consensus 117 L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 196 (769)
|+|++|++++ +|. .+++|++|+|++|+|++ +|. .+++|+.|+|++|++++ +|.. +++|++|+|++|.+
T Consensus 86 L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l 153 (622)
T 3g06_A 86 LEVSGNQLTS-LPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQL 153 (622)
T ss_dssp EEECSCCCSC-CCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCC
T ss_pred EEcCCCcCCc-CCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcC
Confidence 7777777653 454 56677777777777764 444 45667777777777764 4543 36777777777777
Q ss_pred cccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCC
Q 004195 197 SGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSY 276 (769)
Q Consensus 197 ~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l 276 (769)
++ +|. .+++|+.|++++|++++ +| ..+++|+.|++++|.+++ +|....+|..|++++|.++. + |. .+
T Consensus 154 ~~-l~~---~~~~L~~L~L~~N~l~~-l~--~~~~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~-l-~~---~~ 220 (622)
T 3g06_A 154 AS-LPA---LPSELCKLWAYNNQLTS-LP--MLPSGLQELSVSDNQLAS-LPTLPSELYKLWAYNNRLTS-L-PA---LP 220 (622)
T ss_dssp SC-CCC---CCTTCCEEECCSSCCSC-CC--CCCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSS-C-CC---CC
T ss_pred CC-cCC---ccCCCCEEECCCCCCCC-Cc--ccCCCCcEEECCCCCCCC-CCCccchhhEEECcCCcccc-c-CC---CC
Confidence 74 343 34567777777777775 33 456889999999999885 55667889999999999883 4 43 35
Q ss_pred CcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEEC
Q 004195 277 NQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLY 356 (769)
Q Consensus 277 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l 356 (769)
++|+.|+|++|++++ +| ..+++|+.|+|++|+|+. +|. .+++|+.|+|++|+|+ .+|..+..+++++.+++
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L 291 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNL 291 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEEC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEe
Confidence 789999999999987 45 456899999999999996 444 5689999999999999 77889999999999999
Q ss_pred CCCCCChhhh
Q 004195 357 SKNCLSNEEQ 366 (769)
Q Consensus 357 ~~N~l~~~~~ 366 (769)
++|.+++..+
T Consensus 292 ~~N~l~~~~~ 301 (622)
T 3g06_A 292 EGNPLSERTL 301 (622)
T ss_dssp CSCCCCHHHH
T ss_pred cCCCCCCcCH
Confidence 9999988654
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-27 Score=254.65 Aligned_cols=236 Identities=23% Similarity=0.213 Sum_probs=160.7
Q ss_pred cccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcC
Q 004195 106 STLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQV 185 (769)
Q Consensus 106 ~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 185 (769)
..+..+++|+.|+|++|++++..|..|.++++|++|+|++|.+++..| |..+++|++|+|++|++++.. .+++
T Consensus 28 ~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~-----~~~~ 100 (317)
T 3o53_A 28 SLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPS 100 (317)
T ss_dssp HHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE-----ECTT
T ss_pred HHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc-----CCCC
Confidence 344566788888888888887777788888888888888888876554 888888888888888887432 2378
Q ss_pred CCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCC-CCCCCccCcEEeccCCcCCCCCccc----ccCCcEEEeC
Q 004195 186 LSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIP-DLRNLKNLRVFDVQDNYFGPRFPRL----HKKMVTLVLR 260 (769)
Q Consensus 186 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p-~l~~l~~L~~l~l~~N~l~~~~p~~----~~~L~~L~l~ 260 (769)
|++|++++|.+++..+.. +++|+.|++++|++++..+ .+..+++|+.|++++|.+++..+.. +++|++|+|+
T Consensus 101 L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~ 177 (317)
T 3o53_A 101 IETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQ 177 (317)
T ss_dssp CCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECT
T ss_pred cCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECC
Confidence 888888888888655443 5678888888888887665 4677788888888888777654432 3566666666
Q ss_pred CccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCC-C
Q 004195 261 NNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLT-G 339 (769)
Q Consensus 261 ~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~-g 339 (769)
+|.++.. + ....+++|++|+|++|++++ +|+.+..+++|+.|+|++|++++ +|..+..+++|+.|++++|.++ +
T Consensus 178 ~N~l~~~--~-~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~ 252 (317)
T 3o53_A 178 YNFIYDV--K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCG 252 (317)
T ss_dssp TSCCCEE--E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBHH
T ss_pred CCcCccc--c-cccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCcccc-hhhHhhcCCCCCEEEccCCCccCc
Confidence 6666532 2 22236666666666666665 33346666666666666666664 4555666666666666666666 5
Q ss_pred CCCccccccCCCceEEC
Q 004195 340 YLPSCLQVEAKTRLVLY 356 (769)
Q Consensus 340 ~~p~~~~~~~~l~~l~l 356 (769)
.+|..+..+++++.+++
T Consensus 253 ~~~~~~~~~~~L~~l~l 269 (317)
T 3o53_A 253 TLRDFFSKNQRVQTVAK 269 (317)
T ss_dssp HHHHHHHTCHHHHHHHH
T ss_pred CHHHHHhccccceEEEC
Confidence 55555555544444444
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.9e-27 Score=264.23 Aligned_cols=214 Identities=23% Similarity=0.207 Sum_probs=141.5
Q ss_pred CCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEE
Q 004195 110 SLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVL 189 (769)
Q Consensus 110 ~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 189 (769)
.+++|+.|+|++|.+++..|..|+++++|++|+|++|.+++.+| |+.+++|++|+|++|.|++..+ .++|++|
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L 104 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETL 104 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEE
Confidence 34589999999999988878889999999999999999887665 8889999999999998875432 3788899
Q ss_pred eccCCCCcccCCccccCCCCCCEEEccCccccccCC-CCCCCccCcEEeccCCcCCCCCccc----ccCCcEEEeCCccc
Q 004195 190 SLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIP-DLRNLKNLRVFDVQDNYFGPRFPRL----HKKMVTLVLRNNRF 264 (769)
Q Consensus 190 ~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p-~l~~l~~L~~l~l~~N~l~~~~p~~----~~~L~~L~l~~N~~ 264 (769)
+|++|.+++..+. .+++|+.|+|++|.+++.+| .++.+++|+.|++++|.+++..|.. +++|+.|+|++|.+
T Consensus 105 ~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l 181 (487)
T 3oja_A 105 HAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFI 181 (487)
T ss_dssp ECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCC
T ss_pred ECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcc
Confidence 9999988876554 45788888888888888766 4677888888888887776544432 23455555555554
Q ss_pred cCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCC
Q 004195 265 QFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLT 338 (769)
Q Consensus 265 ~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~ 338 (769)
++. | .+..+++|++|+|++|.+++. |+.+..+++|+.|+|++|.+++ +|..+..+++|+.|++++|.+.
T Consensus 182 ~~~--~-~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~ 250 (487)
T 3oja_A 182 YDV--K-GQVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFH 250 (487)
T ss_dssp CEE--E-CCCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBC
T ss_pred ccc--c-ccccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCc
Confidence 432 1 122344555555555555442 2234444555555555555543 3334444455555555555444
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.93 E-value=8.8e-25 Score=226.60 Aligned_cols=217 Identities=21% Similarity=0.228 Sum_probs=133.0
Q ss_pred CCCCCCCCCCcceEecCCCeeEEEeCCCCCCCCCCCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcC
Q 004195 59 DFCNIEPTPSLTLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSL 138 (769)
Q Consensus 59 ~~c~~~~~~~~~v~C~~~~v~~l~l~~~~~~~~~~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L 138 (769)
++|.|.| ....|. .+++.++++++.+..+ |..+. ++|+.|+|++|++++..+..|.++++|
T Consensus 3 ~~C~~~~---~~C~c~-~~~~~l~~~~~~l~~i-------------p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L 63 (270)
T 2o6q_A 3 ALCKKDG---GVCSCN-NNKNSVDCSSKKLTAI-------------PSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKL 63 (270)
T ss_dssp CCBGGGT---CSBEEE-TTTTEEECTTSCCSSC-------------CSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTC
T ss_pred ccCCCCC---CCCEeC-CCCCEEEccCCCCCcc-------------CCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCC
Confidence 7899975 123443 2456677666554422 11121 356667777777666555566667777
Q ss_pred ceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCc
Q 004195 139 EILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSAN 218 (769)
Q Consensus 139 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N 218 (769)
++|+|++|.++...+..|.++++|++|+|++|++++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 64 ~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 143 (270)
T 2o6q_A 64 RLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYN 143 (270)
T ss_dssp CEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCC
Confidence 77777777666544444566666666666666666555555666666666666666666655555666666666666666
Q ss_pred cccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCC
Q 004195 219 HLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLL 298 (769)
Q Consensus 219 ~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 298 (769)
++++.. +..+..+++|++|+|++|.+++..+..|.
T Consensus 144 ~l~~~~---------------------------------------------~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 178 (270)
T 2o6q_A 144 ELQSLP---------------------------------------------KGVFDKLTSLKELRLYNNQLKRVPEGAFD 178 (270)
T ss_dssp CCCCCC---------------------------------------------TTTTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred cCCccC---------------------------------------------HhHccCCcccceeEecCCcCcEeChhHhc
Confidence 555332 23344555666666666666655555566
Q ss_pred CCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCC
Q 004195 299 SLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTG 339 (769)
Q Consensus 299 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g 339 (769)
++++|+.|+|++|++++..+..+..+++|+.|+|++|.+..
T Consensus 179 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 179 KLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp TCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred cCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 66677777777777766655566666777777777776654
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.8e-26 Score=241.97 Aligned_cols=236 Identities=19% Similarity=0.179 Sum_probs=203.5
Q ss_pred CCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEecc
Q 004195 113 SLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLK 192 (769)
Q Consensus 113 ~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 192 (769)
+++.++++.+.+...++..+..+++|++|+|++|++++..|..|.++++|++|+|++|++++..| |..+++|++|+|+
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 45677888888866666667788899999999999998888999999999999999999987655 9999999999999
Q ss_pred CCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCccc---ccCCcEEEeCCccccCCcC
Q 004195 193 NNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRL---HKKMVTLVLRNNRFQFGLN 269 (769)
Q Consensus 193 ~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~---~~~L~~L~l~~N~~~~~i~ 269 (769)
+|.+++.. .+++|+.|++++|++++..+. .+++|+.|++++|.+++..+.. +++|+.|+|++|.+++..
T Consensus 89 ~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~--~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~- 160 (317)
T 3o53_A 89 NNYVQELL-----VGPSIETLHAANNNISRVSCS--RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN- 160 (317)
T ss_dssp SSEEEEEE-----ECTTCCEEECCSSCCSEEEEC--CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEE-
T ss_pred CCcccccc-----CCCCcCEEECCCCccCCcCcc--ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCccc-
Confidence 99998543 348999999999999987654 3688999999999999876643 578999999999999654
Q ss_pred chhh-cCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCcccccc
Q 004195 270 PDEL-RSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVE 348 (769)
Q Consensus 270 p~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~ 348 (769)
+..+ ..+++|++|+|++|.+++. +....+++|+.|+|++|++++..+ .+..+++|+.|+|++|+++ .+|..+..+
T Consensus 161 ~~~~~~~l~~L~~L~L~~N~l~~~--~~~~~l~~L~~L~Ls~N~l~~l~~-~~~~l~~L~~L~L~~N~l~-~l~~~~~~l 236 (317)
T 3o53_A 161 FAELAASSDTLEHLNLQYNFIYDV--KGQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLV-LIEKALRFS 236 (317)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEE--ECCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCC-EECTTCCCC
T ss_pred HHHHhhccCcCCEEECCCCcCccc--ccccccccCCEEECCCCcCCcchh-hhcccCcccEEECcCCccc-chhhHhhcC
Confidence 5655 5789999999999999875 344468999999999999998655 4889999999999999999 467788889
Q ss_pred CCCceEECCCCCCC
Q 004195 349 AKTRLVLYSKNCLS 362 (769)
Q Consensus 349 ~~l~~l~l~~N~l~ 362 (769)
++++.+++++|.+.
T Consensus 237 ~~L~~L~l~~N~~~ 250 (317)
T 3o53_A 237 QNLEHFDLRGNGFH 250 (317)
T ss_dssp TTCCEEECTTCCCB
T ss_pred CCCCEEEccCCCcc
Confidence 99999999999987
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-25 Score=253.25 Aligned_cols=215 Identities=19% Similarity=0.187 Sum_probs=189.9
Q ss_pred CCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEE
Q 004195 134 HSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVV 213 (769)
Q Consensus 134 ~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 213 (769)
.+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++.+| |+.+++|++|+|++|.+++..+ .++|+.|
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L 104 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETL 104 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEE
Confidence 34489999999999999888999999999999999999997766 9999999999999999986443 3899999
Q ss_pred EccCccccccCCCCCCCccCcEEeccCCcCCCCCccc---ccCCcEEEeCCccccCCcCchhhc-CCCcCcEEeccCccc
Q 004195 214 SLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRL---HKKMVTLVLRNNRFQFGLNPDELR-SYNQLQKLDISLNRF 289 (769)
Q Consensus 214 ~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~---~~~L~~L~l~~N~~~~~i~p~~~~-~l~~L~~L~Ls~N~l 289 (769)
++++|.+++.++. .+++|+.|++++|.+++..|.. +++|+.|+|++|.+++.+ |..+. .+++|+.|+|++|.|
T Consensus 105 ~L~~N~l~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-~~~l~~~l~~L~~L~Ls~N~l 181 (487)
T 3oja_A 105 HAANNNISRVSCS--RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN-FAELAASSDTLEHLNLQYNFI 181 (487)
T ss_dssp ECCSSCCCCEEEC--CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEE-GGGGGGGTTTCCEEECTTSCC
T ss_pred ECcCCcCCCCCcc--ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcC-hHHHhhhCCcccEEecCCCcc
Confidence 9999999987764 4689999999999999887754 578999999999999765 77775 799999999999999
Q ss_pred cccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCC
Q 004195 290 VGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLS 362 (769)
Q Consensus 290 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~ 362 (769)
++. +.+..+++|+.|+|++|.+++.+|. +..+++|+.|+|++|.+++ +|..+..+++++.+++++|.+.
T Consensus 182 ~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~ 250 (487)
T 3oja_A 182 YDV--KGQVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFH 250 (487)
T ss_dssp CEE--ECCCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBC
T ss_pred ccc--cccccCCCCCEEECCCCCCCCCCHh-HcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCc
Confidence 986 3455699999999999999986554 8899999999999999996 6777888899999999999887
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2e-24 Score=224.77 Aligned_cols=222 Identities=21% Similarity=0.219 Sum_probs=187.4
Q ss_pred EeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCc
Q 004195 118 SLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLS 197 (769)
Q Consensus 118 ~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 197 (769)
+.++.++ ..+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|.++
T Consensus 13 ~c~~~~l-~~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 89 (276)
T 2z62_A 13 QCMELNF-YKIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 89 (276)
T ss_dssp ECTTSCC-SSCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred EecCCCc-cccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccC
Confidence 3334444 24565554 57999999999999877779999999999999999999888889999999999999999999
Q ss_pred ccCCccccCCCCCCEEEccCccccccCC-CCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCC
Q 004195 198 GFLPVSLTGLQSLRVVSLSANHLSGEIP-DLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSY 276 (769)
Q Consensus 198 ~~~p~~l~~l~~L~~L~ls~N~l~~~~p-~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l 276 (769)
+..|..|.++++|++|++++|++++..+ .+..+++|+.|++++|.+++. .+ |..+..+
T Consensus 90 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~--------------------~l-~~~~~~l 148 (276)
T 2z62_A 90 SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF--------------------KL-PEYFSNL 148 (276)
T ss_dssp EECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCC--------------------CC-CGGGGGC
T ss_pred ccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCcccee--------------------cC-chhhccC
Confidence 9888999999999999999999988766 477888888888877766421 23 7888999
Q ss_pred CcCcEEeccCccccccCCccCCCCCCCC----EEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCc
Q 004195 277 NQLQKLDISLNRFVGPFIPSLLSLPSIT----YLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTR 352 (769)
Q Consensus 277 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~----~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~ 352 (769)
++|++|+|++|++++..+..+..+++|+ .|++++|.+++..+..+.. .+|+.|++++|++++..+..+..+++++
T Consensus 149 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 227 (276)
T 2z62_A 149 TNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQ 227 (276)
T ss_dssp TTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCC
T ss_pred CCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhccccccc
Confidence 9999999999999998777787777776 8999999999877666654 5899999999999988888888899999
Q ss_pred eEECCCCCCChh
Q 004195 353 LVLYSKNCLSNE 364 (769)
Q Consensus 353 ~l~l~~N~l~~~ 364 (769)
.+++++|.+.+.
T Consensus 228 ~L~l~~N~~~c~ 239 (276)
T 2z62_A 228 KIWLHTNPWDCS 239 (276)
T ss_dssp EEECCSSCBCCC
T ss_pred EEEccCCccccc
Confidence 999999988653
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.92 E-value=8.8e-25 Score=226.80 Aligned_cols=210 Identities=22% Similarity=0.241 Sum_probs=165.9
Q ss_pred ccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCC
Q 004195 107 TLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVL 186 (769)
Q Consensus 107 ~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 186 (769)
.+..+++|+.|++++|.+.. + ..+..+++|++|+|++|.+++ + ..+..+++|++|+|++|.+++..|..|.++++|
T Consensus 36 ~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 111 (272)
T 3rfs_A 36 TQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNL 111 (272)
T ss_dssp CHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTC
T ss_pred ccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCC
Confidence 34567788888888888753 3 347888888888888888875 3 378888888888888888887777778888888
Q ss_pred CEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCcccc
Q 004195 187 SVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQ 265 (769)
Q Consensus 187 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~ 265 (769)
++|+|++|++++..+..|+++++|++|++++|++++.++. +..+++|+.|++++|.+++
T Consensus 112 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-------------------- 171 (272)
T 3rfs_A 112 KELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS-------------------- 171 (272)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC--------------------
T ss_pred CEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCc--------------------
Confidence 8888888888877777788888888888888888876665 5677777777776666542
Q ss_pred CCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccc
Q 004195 266 FGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCL 345 (769)
Q Consensus 266 ~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~ 345 (769)
+.+..+..+++|++|+|++|++++..+..+..+++|+.|++++|.+.+. +++|+.++++.|.++|.+|..+
T Consensus 172 --~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~ 242 (272)
T 3rfs_A 172 --LPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSA 242 (272)
T ss_dssp --CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTT
T ss_pred --cCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcc
Confidence 3255677888999999999999987777788999999999999988753 5678899999999999999887
Q ss_pred cccC
Q 004195 346 QVEA 349 (769)
Q Consensus 346 ~~~~ 349 (769)
+.+.
T Consensus 243 ~~~~ 246 (272)
T 3rfs_A 243 GSVA 246 (272)
T ss_dssp SCBC
T ss_pred cccC
Confidence 6543
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.4e-23 Score=217.81 Aligned_cols=202 Identities=25% Similarity=0.262 Sum_probs=121.5
Q ss_pred cCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCC
Q 004195 108 LGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLS 187 (769)
Q Consensus 108 ~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 187 (769)
+.++++|+.+++++|+++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+ . +.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~-~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV-D-GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC-C-SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC-C-CCCCcCC
Confidence 456677777777777775 3454443 567777777777776666777777777777777777764332 2 6677777
Q ss_pred EEeccCCCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccC
Q 004195 188 VLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQF 266 (769)
Q Consensus 188 ~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~ 266 (769)
+|+|++|+++ .+|..+.++++|++|+|++|++++.++. +..+++|+.|++++|.+++
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~--------------------- 138 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKT--------------------- 138 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCC---------------------
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCc---------------------
Confidence 7777777776 4566666777777777777776655443 4555555555555444431
Q ss_pred CcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCC
Q 004195 267 GLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLT 338 (769)
Q Consensus 267 ~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~ 338 (769)
+++..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|+++. +|..+..+++|+.++|++|.+.
T Consensus 139 -~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~-ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 139 -LPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYT-IPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp -CCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCCCSEEECCSCCBC
T ss_pred -cChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCc-cChhhcccccCCeEEeCCCCcc
Confidence 223344455555566666655554444444555555555555555553 3444444455555555555544
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.91 E-value=5.1e-23 Score=213.31 Aligned_cols=203 Identities=22% Similarity=0.226 Sum_probs=137.5
Q ss_pred CCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEecc
Q 004195 113 SLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLK 192 (769)
Q Consensus 113 ~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 192 (769)
+++.+++++++++. +|..+. ++|++|+|++|++++..+..|.++++|++|+|++|+++...+..|.++++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 34555555555542 343332 345555555555554444455555555555555555553333344455555555555
Q ss_pred CCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchh
Q 004195 193 NNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDE 272 (769)
Q Consensus 193 ~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~ 272 (769)
+|.+++..+..|.++++|++|++++|++++ +.+..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~---------------------------------------------~~~~~ 128 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKS---------------------------------------------LPPRV 128 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCC---------------------------------------------CCTTT
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCe---------------------------------------------eCHHH
Confidence 555554444444444444444444444332 22556
Q ss_pred hcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCc
Q 004195 273 LRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTR 352 (769)
Q Consensus 273 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~ 352 (769)
|..+++|++|+|++|.+++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..+..+++++
T Consensus 129 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 208 (270)
T 2o6q_A 129 FDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLK 208 (270)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCC
T ss_pred hCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCC
Confidence 77888999999999999987777799999999999999999998888899999999999999999988888888899999
Q ss_pred eEECCCCCCCh
Q 004195 353 LVLYSKNCLSN 363 (769)
Q Consensus 353 ~l~l~~N~l~~ 363 (769)
.+++++|.+..
T Consensus 209 ~L~l~~N~~~c 219 (270)
T 2o6q_A 209 MLQLQENPWDC 219 (270)
T ss_dssp EEECCSSCBCC
T ss_pred EEEecCCCeeC
Confidence 99999997653
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-23 Score=222.82 Aligned_cols=226 Identities=18% Similarity=0.176 Sum_probs=161.7
Q ss_pred CCCcEEEeecccccCC-CCc--cccCCCcCceeeccCcccCCcCCccc--cCCCcCCEEEcccCcCCccCC----ccCcC
Q 004195 112 SSLKVLSLVSLGLWGP-LPG--SIAHSSSLEILNLSSNYLSGSIPVQI--SSLRNLQTLILDDNKFTGAVP----SELSL 182 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~-~p~--~~~~l~~L~~L~Ls~N~l~g~~p~~~--~~l~~L~~L~L~~N~l~~~~p----~~~~~ 182 (769)
..++.|.+.++.++.. +.. .+..+++|++|+|++|.+++..|..+ ..+++|++|+|++|++++..| ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 4578888888777532 111 12345679999999999999999998 899999999999999998666 45678
Q ss_pred CcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccc---cCCC--CCCCccCcEEeccCCcCCCCCcccccCCcEE
Q 004195 183 LQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSG---EIPD--LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTL 257 (769)
Q Consensus 183 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~---~~p~--l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L 257 (769)
+++|++|+|++|.+++..|..|+++++|++|+|++|++.+ ..+. +..+++|++|++++|.++.. +.
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l-~~-------- 214 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETP-TG-------- 214 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCH-HH--------
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCch-HH--------
Confidence 9999999999999998888999999999999999999876 2222 36788888888888877521 11
Q ss_pred EeCCccccCCcCch-hhcCCCcCcEEeccCccccccCCccCCCC---CCCCEEEccCCcCCccccccCCCCCCCcEEEcc
Q 004195 258 VLRNNRFQFGLNPD-ELRSYNQLQKLDISLNRFVGPFIPSLLSL---PSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLS 333 (769)
Q Consensus 258 ~l~~N~~~~~i~p~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l---~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~ 333 (769)
. +. .+..+++|++|+|++|++.+..|+.+..+ ++|++|+|++|+++. +|..+. ++|+.|+|+
T Consensus 215 ----------~-~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~-lp~~~~--~~L~~L~Ls 280 (310)
T 4glp_A 215 ----------V-CAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQ-VPKGLP--AKLRVLDLS 280 (310)
T ss_dssp ----------H-HHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCS-CCSCCC--SCCSCEECC
T ss_pred ----------H-HHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCc-hhhhhc--CCCCEEECC
Confidence 0 11 23556666677777777666656555554 467777777777663 454443 567777777
Q ss_pred CCcCCCCCCccccccCCCceEECCCCCCC
Q 004195 334 SNLLTGYLPSCLQVEAKTRLVLYSKNCLS 362 (769)
Q Consensus 334 ~N~l~g~~p~~~~~~~~l~~l~l~~N~l~ 362 (769)
+|++++. |. +..+++++.+++++|.++
T Consensus 281 ~N~l~~~-~~-~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 281 SNRLNRA-PQ-PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp SCCCCSC-CC-TTSCCCCSCEECSSTTTS
T ss_pred CCcCCCC-ch-hhhCCCccEEECcCCCCC
Confidence 7777653 22 344566667777777664
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.90 E-value=3.8e-23 Score=216.34 Aligned_cols=204 Identities=22% Similarity=0.179 Sum_probs=172.6
Q ss_pred cccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCC
Q 004195 131 SIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSL 210 (769)
Q Consensus 131 ~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L 210 (769)
.++++++|+.+++++|.++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|.+++..+. +.+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTC
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcC
Confidence 4778889999999999998 5776664 6889999999999888888899999999999999999865433 788899
Q ss_pred CEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCcccc
Q 004195 211 RVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFV 290 (769)
Q Consensus 211 ~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~ 290 (769)
++|+|++|+++.....+..+++|+.|++++|.++ .+.|..|..+++|++|+|++|+++
T Consensus 80 ~~L~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~----------------------~l~~~~~~~l~~L~~L~L~~N~l~ 137 (290)
T 1p9a_G 80 GTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLT----------------------SLPLGALRGLGELQELYLKGNELK 137 (290)
T ss_dssp CEEECCSSCCSSCCCCTTTCTTCCEEECCSSCCC----------------------CCCSSTTTTCTTCCEEECTTSCCC
T ss_pred CEEECCCCcCCcCchhhccCCCCCEEECCCCcCc----------------------ccCHHHHcCCCCCCEEECCCCCCC
Confidence 9999999998855545677777777777776664 233677889999999999999999
Q ss_pred ccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCC
Q 004195 291 GPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLS 362 (769)
Q Consensus 291 ~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~ 362 (769)
+..+..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|+++ .+|..+.....++.+++++|.+.
T Consensus 138 ~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 138 TLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred ccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 887778899999999999999999988888899999999999999999 67777777788999999999764
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.8e-23 Score=217.00 Aligned_cols=206 Identities=20% Similarity=0.234 Sum_probs=173.3
Q ss_pred CCeeEEEeCCCCCCCCCCCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCcc
Q 004195 76 DNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQ 155 (769)
Q Consensus 76 ~~v~~l~l~~~~~~~~~~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~ 155 (769)
.+++.|++.++.... .+.+..+++|++|+|++|.+++. +.++++++|++|+|++|.+++..|..
T Consensus 41 ~~L~~L~l~~~~i~~--------------~~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~ 104 (272)
T 3rfs_A 41 NSIDQIIANNSDIKS--------------VQGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGV 104 (272)
T ss_dssp TTCCEEECTTSCCCC--------------CTTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTT
T ss_pred cceeeeeeCCCCccc--------------ccccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhH
Confidence 367888877665432 13578899999999999999873 47999999999999999999888888
Q ss_pred ccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCc
Q 004195 156 ISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLR 234 (769)
Q Consensus 156 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~ 234 (769)
|+++++|++|+|++|++++..|..|+.+++|++|+|++|.+++..+..|+++++|+.|++++|++++.++. +..+++|+
T Consensus 105 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 184 (272)
T 3rfs_A 105 FDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLK 184 (272)
T ss_dssp TTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred hcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCC
Confidence 99999999999999999988888899999999999999999988888899999999999999999987776 67888888
Q ss_pred EEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCC
Q 004195 235 VFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLT 314 (769)
Q Consensus 235 ~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 314 (769)
.|++++|.+++. .+..+..+++|++|+|++|.+.+ .+++|+.|+++.|+++
T Consensus 185 ~L~L~~N~l~~~----------------------~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~l~~~~n~~~ 235 (272)
T 3rfs_A 185 DLRLYQNQLKSV----------------------PDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHS 235 (272)
T ss_dssp EEECCSSCCSCC----------------------CTTTTTTCTTCCEEECCSSCBCC-------CTTTTHHHHHHHHHTG
T ss_pred EEECCCCcCCcc----------------------CHHHHhCCcCCCEEEccCCCccc-------cCcHHHHHHHHHHhCC
Confidence 888888877632 25556778888888888887765 3557888888888888
Q ss_pred ccccccCCCCCC
Q 004195 315 GLLLQNMSCNPQ 326 (769)
Q Consensus 315 ~~~~~~~~~l~~ 326 (769)
|.+|..++.++.
T Consensus 236 g~ip~~~~~~~~ 247 (272)
T 3rfs_A 236 GVVRNSAGSVAP 247 (272)
T ss_dssp GGBBCTTSCBCG
T ss_pred CcccCcccccCC
Confidence 888887776543
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=7.5e-25 Score=248.54 Aligned_cols=181 Identities=13% Similarity=0.142 Sum_probs=137.6
Q ss_pred CCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCC--------hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 483 DSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSS--------PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 483 ~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~--------~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
...+.||+|+||.||+|+. .++.+|+|+........ .+.+.+|++++++++||||+++..++.+.+.
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~---- 413 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDN---- 413 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTT----
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCc----
Confidence 3467999999999999955 47889999875432221 2347899999999999999955555544222
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
.++||||+++++|.+++.. +..++.|+++||+|||+. +|+||||||+|||++. ++||+|||++
T Consensus 414 ---~~lVmE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla 476 (540)
T 3en9_A 414 ---KRIMMSYINGKLAKDVIED---------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLG 476 (540)
T ss_dssp ---TEEEEECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTC
T ss_pred ---cEEEEECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccC
Confidence 5999999999999999975 568999999999999999 9999999999999998 9999999999
Q ss_pred hhhhccCC---------cceeecCCCcchhhhcc--CCCCCCCCeeehhHHHHHHHhCCCCC
Q 004195 635 LLAEARGK---------GSAEVSSPAKKTSVLAR--TEQDDKSDVYDIGIILIEIIVGRPIT 685 (769)
Q Consensus 635 ~~~~~~~~---------~~~~~~~~~~~pe~~~~--~~~~~ksDVwS~Gvil~elltG~~p~ 685 (769)
+....... ....++..|++||.+.. ..|+.++|+||..+-.++-+.++.++
T Consensus 477 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 477 KISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp EECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred EECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 76543211 12345567778998865 56888999999999888888777665
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.89 E-value=5.8e-23 Score=208.77 Aligned_cols=195 Identities=16% Similarity=0.180 Sum_probs=120.0
Q ss_pred CCcEEEeecccccCCCCccccCCCcCceeeccCcc-cCCcCCccccCCCcCCEEEccc-CcCCccCCccCcCCcCCCEEe
Q 004195 113 SLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNY-LSGSIPVQISSLRNLQTLILDD-NKFTGAVPSELSLLQVLSVLS 190 (769)
Q Consensus 113 ~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~ 190 (769)
+|+.|+|++|++++..+..|.++++|++|+|++|+ +++..+..|.++++|++|+|++ |++++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 67777777777776666677777777777777775 6655555677777777777776 777766666677777777777
Q ss_pred ccCCCCcccCCccccCCCCCC---EEEccCc-cccccCCC-CCCCccCc-EEeccCCcCCCCCcccccCCcEEEeCCccc
Q 004195 191 LKNNSLSGFLPVSLTGLQSLR---VVSLSAN-HLSGEIPD-LRNLKNLR-VFDVQDNYFGPRFPRLHKKMVTLVLRNNRF 264 (769)
Q Consensus 191 L~~N~l~~~~p~~l~~l~~L~---~L~ls~N-~l~~~~p~-l~~l~~L~-~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~ 264 (769)
|++|.+++ +|. |.++++|+ +|++++| ++++..+. +..+++|+ .|++++|.++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-------------------- 169 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-------------------- 169 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC--------------------
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc--------------------
Confidence 77777765 454 66666666 7777776 66654443 45555555 5555555443
Q ss_pred cCCcCchhhcCCCcCcEEeccCcc-ccccCCccCCCC-CCCCEEEccCCcCCccccccCCCCCCCcEEEccCC
Q 004195 265 QFGLNPDELRSYNQLQKLDISLNR-FVGPFIPSLLSL-PSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSN 335 (769)
Q Consensus 265 ~~~i~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l-~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N 335 (769)
.+++..+.. ++|+.|+|++|. +++..+..|..+ ++|+.|++++|++++..+. .+++|+.|+++++
T Consensus 170 --~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 170 --SVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp --EECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred --ccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 221222222 456666666663 655444555566 6666666666666543332 3445555555543
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-23 Score=222.30 Aligned_cols=202 Identities=18% Similarity=0.180 Sum_probs=160.8
Q ss_pred CCCCCcEEEeecccccCCCCccc--cCCCcCceeeccCcccCCcCC----ccccCCCcCCEEEcccCcCCccCCccCcCC
Q 004195 110 SLSSLKVLSLVSLGLWGPLPGSI--AHSSSLEILNLSSNYLSGSIP----VQISSLRNLQTLILDDNKFTGAVPSELSLL 183 (769)
Q Consensus 110 ~l~~L~~L~L~~n~l~g~~p~~~--~~l~~L~~L~Ls~N~l~g~~p----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 183 (769)
.+++|+.|+|++|.+++..|..+ .++++|++|+|++|++++..| ..+..+++|++|+|++|++++..|..|+.+
T Consensus 89 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l 168 (310)
T 4glp_A 89 AYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAF 168 (310)
T ss_dssp HHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCC
T ss_pred ccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccC
Confidence 35679999999999999999988 999999999999999998766 456789999999999999998889999999
Q ss_pred cCCCEEeccCCCCccc--C--CccccCCCCCCEEEccCccccccCCC----CCCCccCcEEeccCCcCCCCCcccccCCc
Q 004195 184 QVLSVLSLKNNSLSGF--L--PVSLTGLQSLRVVSLSANHLSGEIPD----LRNLKNLRVFDVQDNYFGPRFPRLHKKMV 255 (769)
Q Consensus 184 ~~L~~L~L~~N~l~~~--~--p~~l~~l~~L~~L~ls~N~l~~~~p~----l~~l~~L~~l~l~~N~l~~~~p~~~~~L~ 255 (769)
++|++|+|++|++.+. + +..++++++|++|+|++|+++...+. +..+++|+.|++++|.+++..|
T Consensus 169 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p------- 241 (310)
T 4glp_A 169 PALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVN------- 241 (310)
T ss_dssp TTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCC-------
T ss_pred CCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccch-------
Confidence 9999999999998753 2 23457899999999999999743221 3567888888888887765543
Q ss_pred EEEeCCccccCCcCchhhcCC---CcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEc
Q 004195 256 TLVLRNNRFQFGLNPDELRSY---NQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDL 332 (769)
Q Consensus 256 ~L~l~~N~~~~~i~p~~~~~l---~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l 332 (769)
..+..+ ++|++|+|++|+++ .+|..+. ++|+.|+|++|++++. |. +..+++|+.|+|
T Consensus 242 ---------------~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L 301 (310)
T 4glp_A 242 ---------------PSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTL 301 (310)
T ss_dssp ---------------SCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEEC
T ss_pred ---------------hhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEEC
Confidence 233333 57778888888877 4566554 6788888888888774 22 566788888888
Q ss_pred cCCcCC
Q 004195 333 SSNLLT 338 (769)
Q Consensus 333 ~~N~l~ 338 (769)
++|+++
T Consensus 302 ~~N~l~ 307 (310)
T 4glp_A 302 DGNPFL 307 (310)
T ss_dssp SSTTTS
T ss_pred cCCCCC
Confidence 888876
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.89 E-value=7.9e-23 Score=207.77 Aligned_cols=203 Identities=16% Similarity=0.218 Sum_probs=170.2
Q ss_pred CCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCc-CCccCCccCcCCcCCCEEeccC-CCCcccCCccc
Q 004195 127 PLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNK-FTGAVPSELSLLQVLSVLSLKN-NSLSGFLPVSL 204 (769)
Q Consensus 127 ~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~l 204 (769)
.+|. +. .+|++|+|++|++++..+..|.++++|++|+|++|+ +++..+..|.++++|++|+|++ |.+++..+..|
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f 101 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDAL 101 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSE
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHh
Confidence 3455 33 389999999999998777789999999999999997 8877777899999999999998 99998888899
Q ss_pred cCCCCCCEEEccCccccccCCCCCCCccCc---EEeccCC-cCCCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCc
Q 004195 205 TGLQSLRVVSLSANHLSGEIPDLRNLKNLR---VFDVQDN-YFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQ 280 (769)
Q Consensus 205 ~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~---~l~l~~N-~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~ 280 (769)
.++++|++|++++|++++ +|.+..+++|+ .|++++| .++ .+++..|..+++|+
T Consensus 102 ~~l~~L~~L~l~~n~l~~-lp~~~~l~~L~~L~~L~l~~N~~l~----------------------~i~~~~~~~l~~L~ 158 (239)
T 2xwt_C 102 KELPLLKFLGIFNTGLKM-FPDLTKVYSTDIFFILEITDNPYMT----------------------SIPVNAFQGLCNET 158 (239)
T ss_dssp ECCTTCCEEEEEEECCCS-CCCCTTCCBCCSEEEEEEESCTTCC----------------------EECTTTTTTTBSSE
T ss_pred CCCCCCCEEeCCCCCCcc-ccccccccccccccEEECCCCcchh----------------------hcCcccccchhcce
Confidence 999999999999999997 66688888887 7777777 554 34356688899999
Q ss_pred -EEeccCccccccCCccCCCCCCCCEEEccCCc-CCccccccCCCC-CCCcEEEccCCcCCCCCCccccccCCCceEECC
Q 004195 281 -KLDISLNRFVGPFIPSLLSLPSITYLDIHGNK-LTGLLLQNMSCN-PQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYS 357 (769)
Q Consensus 281 -~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~l-~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~ 357 (769)
+|++++|+++. +|+.....++|+.|+|++|+ +++..+..|..+ ++|+.|++++|++++..+. .+.+++.+.++
T Consensus 159 ~~L~l~~n~l~~-i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~ 234 (239)
T 2xwt_C 159 LTLKLYNNGFTS-VQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIAR 234 (239)
T ss_dssp EEEECCSCCCCE-ECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECT
T ss_pred eEEEcCCCCCcc-cCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeecc
Confidence 99999999984 55544444899999999995 998888889999 9999999999999965544 45677888887
Q ss_pred CC
Q 004195 358 KN 359 (769)
Q Consensus 358 ~N 359 (769)
++
T Consensus 235 ~~ 236 (239)
T 2xwt_C 235 NT 236 (239)
T ss_dssp TC
T ss_pred Cc
Confidence 65
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.89 E-value=2e-22 Score=231.47 Aligned_cols=240 Identities=26% Similarity=0.266 Sum_probs=195.5
Q ss_pred CCeeEEEeCCCCCCCCCC--------CCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcc
Q 004195 76 DNLTQLHIAGDNNNNING--------GLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNY 147 (769)
Q Consensus 76 ~~v~~l~l~~~~~~~~~~--------~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~ 147 (769)
.+++.|++++|.+..++. ++++|.++. +|. .+++|++|+|++|++++ +|. .+++|++|+|++|+
T Consensus 61 ~~L~~L~L~~N~l~~lp~~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~ 132 (622)
T 3g06_A 61 AHITTLVIPDNNLTSLPALPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQ 132 (622)
T ss_dssp TTCSEEEECSCCCSCCCCCCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSC
T ss_pred CCCcEEEecCCCCCCCCCcCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCC
Confidence 367777777776554332 234455443 343 68999999999999976 454 67899999999999
Q ss_pred cCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCCC
Q 004195 148 LSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDL 227 (769)
Q Consensus 148 l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l 227 (769)
|++ +|.. +++|++|+|++|++++ +|. .+++|+.|+|++|.+++ +| ..+++|+.|++++|++++..+
T Consensus 133 l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~l~~-- 198 (622)
T 3g06_A 133 LTS-LPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLASLPT-- 198 (622)
T ss_dssp CSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCCCC--
T ss_pred CCc-CCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCCCCC--
Confidence 995 6754 4899999999999985 554 35789999999999996 56 567899999999999997433
Q ss_pred CCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEE
Q 004195 228 RNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLD 307 (769)
Q Consensus 228 ~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 307 (769)
.+++|+.|++++|.++ .+|....+|+.|+|++|.+++ + | ..+++|+.|+|++|+|+. +|. .+++|+.|+
T Consensus 199 -~~~~L~~L~L~~N~l~-~l~~~~~~L~~L~Ls~N~L~~-l-p---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~ 267 (622)
T 3g06_A 199 -LPSELYKLWAYNNRLT-SLPALPSGLKELIVSGNRLTS-L-P---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLS 267 (622)
T ss_dssp -CCTTCCEEECCSSCCS-SCCCCCTTCCEEECCSSCCSC-C-C---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEE
T ss_pred -ccchhhEEECcCCccc-ccCCCCCCCCEEEccCCccCc-C-C---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEe
Confidence 2478999999999998 466667899999999999985 5 5 566899999999999986 555 678999999
Q ss_pred ccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccC
Q 004195 308 IHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEA 349 (769)
Q Consensus 308 l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~ 349 (769)
|++|+|+ .+|..+..+++|+.|+|++|.+++.+|..+..+.
T Consensus 268 Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 268 VYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp CCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred CCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 9999999 5688899999999999999999999988776543
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.89 E-value=6.7e-25 Score=239.94 Aligned_cols=238 Identities=24% Similarity=0.246 Sum_probs=146.4
Q ss_pred cccCCCCCCcEEEeecccccCC----CCccccCCCcCceeeccCc---ccCCcCCccc-------cCCCcCCEEEcccCc
Q 004195 106 STLGSLSSLKVLSLVSLGLWGP----LPGSIAHSSSLEILNLSSN---YLSGSIPVQI-------SSLRNLQTLILDDNK 171 (769)
Q Consensus 106 ~~~~~l~~L~~L~L~~n~l~g~----~p~~~~~l~~L~~L~Ls~N---~l~g~~p~~~-------~~l~~L~~L~L~~N~ 171 (769)
..+..+++|+.|+|++|.+++. ++..|.++++|++|+|++| ++++.+|..+ ..+++|++|+|++|.
T Consensus 26 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~ 105 (386)
T 2ca6_A 26 AVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNA 105 (386)
T ss_dssp HHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCC
T ss_pred HHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCc
Confidence 3455566666666666666544 2233556666666666664 3444455444 456666666666666
Q ss_pred CCc----cCCccCcCCcCCCEEeccCCCCcccCCcccc----CC---------CCCCEEEccCcccc-ccCC----CCCC
Q 004195 172 FTG----AVPSELSLLQVLSVLSLKNNSLSGFLPVSLT----GL---------QSLRVVSLSANHLS-GEIP----DLRN 229 (769)
Q Consensus 172 l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~----~l---------~~L~~L~ls~N~l~-~~~p----~l~~ 229 (769)
+++ .+|..+..+++|++|+|++|.++...+..+. .+ ++|++|+|++|+++ +.++ .+..
T Consensus 106 l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~ 185 (386)
T 2ca6_A 106 FGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQS 185 (386)
T ss_dssp CCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHh
Confidence 665 3555566666666666666666533332222 22 55555555555554 2222 1333
Q ss_pred CccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCC----cCchhhcCCCcCcEEeccCcccc----ccCCccCCCCC
Q 004195 230 LKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFG----LNPDELRSYNQLQKLDISLNRFV----GPFIPSLLSLP 301 (769)
Q Consensus 230 l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~----i~p~~~~~l~~L~~L~Ls~N~l~----~~~~~~~~~l~ 301 (769)
+++| +.|+|++|+++.. +.|..+..+++|+.|+|++|.++ +.+|..+..++
T Consensus 186 ~~~L---------------------~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~ 244 (386)
T 2ca6_A 186 HRLL---------------------HTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWP 244 (386)
T ss_dssp CTTC---------------------CEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCT
T ss_pred CCCc---------------------CEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCC
Confidence 4444 4555555544310 11336677788888888888875 55677777888
Q ss_pred CCCEEEccCCcCCcc----ccccC--CCCCCCcEEEccCCcCCC----CCCccc-cccCCCceEECCCCCCChh
Q 004195 302 SITYLDIHGNKLTGL----LLQNM--SCNPQLAFVDLSSNLLTG----YLPSCL-QVEAKTRLVLYSKNCLSNE 364 (769)
Q Consensus 302 ~L~~L~l~~N~l~~~----~~~~~--~~l~~L~~l~l~~N~l~g----~~p~~~-~~~~~l~~l~l~~N~l~~~ 364 (769)
+|+.|+|++|.+++. ++..+ +.+++|+.|+|++|.+++ .+|..+ ..+++++.+++++|.+++.
T Consensus 245 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~ 318 (386)
T 2ca6_A 245 NLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 318 (386)
T ss_dssp TCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred CcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcc
Confidence 888888888888775 45555 347888888888888887 467666 4567888888888887654
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.6e-22 Score=213.62 Aligned_cols=195 Identities=22% Similarity=0.349 Sum_probs=143.7
Q ss_pred cCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCC
Q 004195 108 LGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLS 187 (769)
Q Consensus 108 ~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 187 (769)
+..+++|+.|++++|.++. +| .+..+++|++|+|++|.+++. |. +..+++|++|+|++|++++ +| .+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCC
Confidence 4457788888888888754 44 577888888888888888754 43 8888888888888888875 33 577888888
Q ss_pred EEeccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCC
Q 004195 188 VLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFG 267 (769)
Q Consensus 188 ~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~ 267 (769)
+|+|++|.+++. | .+.++++|+.|++++|++++..+ +..+++|+.|++++|.+++
T Consensus 111 ~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~---------------------- 165 (308)
T 1h6u_A 111 TLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP-LAGLTNLQYLSIGNAQVSD---------------------- 165 (308)
T ss_dssp EEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCC----------------------
T ss_pred EEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc-ccCCCCccEEEccCCcCCC----------------------
Confidence 888888888763 3 37788888888888888876443 6666666666666665542
Q ss_pred cCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCC
Q 004195 268 LNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTG 339 (769)
Q Consensus 268 i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g 339 (769)
+ +. +..+++|+.|++++|.+++..+ +..+++|+.|+|++|++++..+ +..+++|+.|++++|.+++
T Consensus 166 ~-~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 166 L-TP-LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp C-GG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred C-hh-hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 2 22 6777788888888888876433 7778888888888888887653 7778888888888888875
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.88 E-value=8.2e-22 Score=201.82 Aligned_cols=181 Identities=20% Similarity=0.197 Sum_probs=117.0
Q ss_pred CCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEec
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL 191 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 191 (769)
...+.++++++.++ .+|..+. ++|+.|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 34567777777774 4555444 46777777777777666666777777777777777777666666777777777777
Q ss_pred cCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCch
Q 004195 192 KNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPD 271 (769)
Q Consensus 192 ~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~ 271 (769)
++|.+++..+..|.++++|++|+|++|++++..+ .
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~---------------------------------------------~ 125 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPS---------------------------------------------G 125 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT---------------------------------------------T
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcCh---------------------------------------------h
Confidence 7777776666666666677776666666654333 2
Q ss_pred hhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCC
Q 004195 272 ELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGY 340 (769)
Q Consensus 272 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~ 340 (769)
.+..+++|++|+|++|++++..+..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|.+++.
T Consensus 126 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 126 VFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred HhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 344455555666666665554444566666666666666666665555666666666666666666654
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.88 E-value=4.9e-24 Score=230.88 Aligned_cols=246 Identities=20% Similarity=0.140 Sum_probs=126.0
Q ss_pred EEeecccccCCCCccccCCCcCceeeccCcccCCcCC----ccccCCC-cCCEEEcccCcCCccCCccCcCC-----cCC
Q 004195 117 LSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIP----VQISSLR-NLQTLILDDNKFTGAVPSELSLL-----QVL 186 (769)
Q Consensus 117 L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L 186 (769)
++|++|+++|.+|..+...++|++|||++|.+++..+ ..|.+++ +|++|+|++|++++..+..|..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 3445555555555444444445555555555554333 4444454 55555555555554444444443 555
Q ss_pred CEEeccCCCCcccCCcccc----CC-CCCCEEEccCccccccCCC-----CCC-CccCcEEeccCCcCCCCCccc-----
Q 004195 187 SVLSLKNNSLSGFLPVSLT----GL-QSLRVVSLSANHLSGEIPD-----LRN-LKNLRVFDVQDNYFGPRFPRL----- 250 (769)
Q Consensus 187 ~~L~L~~N~l~~~~p~~l~----~l-~~L~~L~ls~N~l~~~~p~-----l~~-l~~L~~l~l~~N~l~~~~p~~----- 250 (769)
++|+|++|.+++..+..+. .+ ++|++|+|++|++++..+. +.. .++|+.|++++|.++...+..
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 162 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHH
Confidence 5555555555544443222 22 4555555555555443321 222 135555555555554322211
Q ss_pred --c-cCCcEEEeCCccccCCcCchh----hcCC-CcCcEEeccCcccccc----CCccCCC-CCCCCEEEccCCcCCccc
Q 004195 251 --H-KKMVTLVLRNNRFQFGLNPDE----LRSY-NQLQKLDISLNRFVGP----FIPSLLS-LPSITYLDIHGNKLTGLL 317 (769)
Q Consensus 251 --~-~~L~~L~l~~N~~~~~i~p~~----~~~l-~~L~~L~Ls~N~l~~~----~~~~~~~-l~~L~~L~l~~N~l~~~~ 317 (769)
. .+|++|+|++|.++... +.. +..+ ++|++|+|++|.+... ++..+.. .++|+.|+|++|.+++..
T Consensus 163 ~~~~~~L~~L~Ls~n~l~~~~-~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 163 AAIPANVNSLNLRGNNLASKN-CAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HTSCTTCCEEECTTSCGGGSC-HHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred hcCCccccEeeecCCCCchhh-HHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 1 25566666666665332 332 2333 4677777777776652 2333333 246777777777776643
Q ss_pred c----ccCCCCCCCcEEEccCCcCCCCCCc-------cccccCCCceEECCCCCCCh
Q 004195 318 L----QNMSCNPQLAFVDLSSNLLTGYLPS-------CLQVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 318 ~----~~~~~l~~L~~l~l~~N~l~g~~p~-------~~~~~~~l~~l~l~~N~l~~ 363 (769)
+ ..+..+++|+.|+|++|.+.+..+. .+..+++++.+++++|.+..
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~ 298 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHP 298 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCG
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCC
Confidence 3 3345566777777777775443332 34455566777777777654
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.88 E-value=7.8e-22 Score=202.01 Aligned_cols=163 Identities=22% Similarity=0.244 Sum_probs=132.0
Q ss_pred CCCCCCCCCCcceEecCCCeeEEEeCCCCCCCCCCCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcC
Q 004195 59 DFCNIEPTPSLTLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSL 138 (769)
Q Consensus 59 ~~c~~~~~~~~~v~C~~~~v~~l~l~~~~~~~~~~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L 138 (769)
+||.|. |+.|.. ..+.+++.++.+..+ |..+. ++|+.|+|++|++++..|..|.++++|
T Consensus 3 ~Cp~~~-----gC~C~~-~~~~l~~~~~~l~~~-------------p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L 61 (251)
T 3m19_A 3 TCETVT-----GCTCNE-GKKEVDCQGKSLDSV-------------PSGIP--ADTEKLDLQSTGLATLSDATFRGLTKL 61 (251)
T ss_dssp -CHHHH-----SSEEEG-GGTEEECTTCCCSSC-------------CSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTC
T ss_pred cCCCCC-----ceEcCC-CCeEEecCCCCcccc-------------CCCCC--CCCCEEEccCCCcCccCHhHhcCcccC
Confidence 566776 488953 456788887766543 22232 589999999999999989999999999
Q ss_pred ceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCc
Q 004195 139 EILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSAN 218 (769)
Q Consensus 139 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N 218 (769)
++|+|++|+|++..|..|.++++|++|+|++|++++..|..|..+++|++|+|++|.+++..+..|.++++|++|+|++|
T Consensus 62 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 141 (251)
T 3m19_A 62 TWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTN 141 (251)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCC
Confidence 99999999999988888999999999999999999888888999999999999999999887888899999999999999
Q ss_pred cccccCCC-CCCCccCcEEeccCCc
Q 004195 219 HLSGEIPD-LRNLKNLRVFDVQDNY 242 (769)
Q Consensus 219 ~l~~~~p~-l~~l~~L~~l~l~~N~ 242 (769)
+|++.++. +..+++|+.|++++|.
T Consensus 142 ~l~~~~~~~~~~l~~L~~L~L~~N~ 166 (251)
T 3m19_A 142 QLQSIPAGAFDKLTNLQTLSLSTNQ 166 (251)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred cCCccCHHHcCcCcCCCEEECCCCc
Confidence 98865442 4444444444443333
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.87 E-value=2.5e-24 Score=235.43 Aligned_cols=224 Identities=18% Similarity=0.214 Sum_probs=169.0
Q ss_pred CCCccccCCCcCceeeccCcccCCcCC----ccccCCCcCCEEEcccC---cCCccCCccC-------cCCcCCCEEecc
Q 004195 127 PLPGSIAHSSSLEILNLSSNYLSGSIP----VQISSLRNLQTLILDDN---KFTGAVPSEL-------SLLQVLSVLSLK 192 (769)
Q Consensus 127 ~~p~~~~~l~~L~~L~Ls~N~l~g~~p----~~~~~l~~L~~L~L~~N---~l~~~~p~~~-------~~l~~L~~L~L~ 192 (769)
.++..+..+++|++|+|++|.+++..+ ..|..+++|++|+|++| ++++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 467788889999999999999987644 44778999999999985 4556667655 688899999999
Q ss_pred CCCCcc----cCCccccCCCCCCEEEccCccccccCCC-----CCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCcc
Q 004195 193 NNSLSG----FLPVSLTGLQSLRVVSLSANHLSGEIPD-----LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNR 263 (769)
Q Consensus 193 ~N~l~~----~~p~~l~~l~~L~~L~ls~N~l~~~~p~-----l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~ 263 (769)
+|.+++ .+|..+.++++|++|+|++|.+++..+. +..+ ..|.+.+. .++|++|+|++|+
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l--------~~~~~~~~----~~~L~~L~L~~n~ 170 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQEL--------AVNKKAKN----APPLRSIICGRNR 170 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHH--------HHHHHHHT----CCCCCEEECCSSC
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHH--------hhhhhccc----CCCCcEEECCCCC
Confidence 999887 4677888888999999998888643221 2222 00000000 0344455555555
Q ss_pred cc-CCcCc---hhhcCCCcCcEEeccCcccc--c---cCCccCCCCCCCCEEEccCCcCC----ccccccCCCCCCCcEE
Q 004195 264 FQ-FGLNP---DELRSYNQLQKLDISLNRFV--G---PFIPSLLSLPSITYLDIHGNKLT----GLLLQNMSCNPQLAFV 330 (769)
Q Consensus 264 ~~-~~i~p---~~~~~l~~L~~L~Ls~N~l~--~---~~~~~~~~l~~L~~L~l~~N~l~----~~~~~~~~~l~~L~~l 330 (769)
++ +.+ + ..+..+++|++|+|++|++. | ..+..+..+++|+.|+|++|.++ +.+|..+..+++|+.|
T Consensus 171 l~~~~~-~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L 249 (386)
T 2ca6_A 171 LENGSM-KEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLREL 249 (386)
T ss_dssp CTGGGH-HHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEE
T ss_pred CCcHHH-HHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEE
Confidence 54 222 3 46778999999999999997 3 34448889999999999999997 6678889999999999
Q ss_pred EccCCcCCCC----CCccccc--cCCCceEECCCCCCCh
Q 004195 331 DLSSNLLTGY----LPSCLQV--EAKTRLVLYSKNCLSN 363 (769)
Q Consensus 331 ~l~~N~l~g~----~p~~~~~--~~~l~~l~l~~N~l~~ 363 (769)
+|++|.+++. +|..+.. +++++.+++++|.+++
T Consensus 250 ~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~ 288 (386)
T 2ca6_A 250 GLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIEL 288 (386)
T ss_dssp ECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBH
T ss_pred ECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCH
Confidence 9999999876 5666633 7889999999999987
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.3e-23 Score=227.45 Aligned_cols=249 Identities=18% Similarity=0.175 Sum_probs=199.8
Q ss_pred CCCCCCCCccccccCCCCCCcEEEeecccccCCCC----ccccCCC-cCceeeccCcccCCcCCccccCC-----CcCCE
Q 004195 95 LAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLP----GSIAHSS-SLEILNLSSNYLSGSIPVQISSL-----RNLQT 164 (769)
Q Consensus 95 l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p----~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l-----~~L~~ 164 (769)
++.|.+++.+|..+...++|+.|+|++|.+++..+ ..|.+++ +|++|+|++|.+++..+..|..+ ++|++
T Consensus 5 ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~ 84 (362)
T 3goz_A 5 LTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTS 84 (362)
T ss_dssp CCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCE
T ss_pred cccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccE
Confidence 45556667777777777889999999999988766 7788998 99999999999998888888876 99999
Q ss_pred EEcccCcCCccCCccCcC----C-cCCCEEeccCCCCcccCCcccc----C-CCCCCEEEccCccccccCCC-----CCC
Q 004195 165 LILDDNKFTGAVPSELSL----L-QVLSVLSLKNNSLSGFLPVSLT----G-LQSLRVVSLSANHLSGEIPD-----LRN 229 (769)
Q Consensus 165 L~L~~N~l~~~~p~~~~~----l-~~L~~L~L~~N~l~~~~p~~l~----~-l~~L~~L~ls~N~l~~~~p~-----l~~ 229 (769)
|+|++|++++..+..+.. + ++|++|+|++|.+++..+..+. . .++|++|+|++|++++.... +..
T Consensus 85 L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~ 164 (362)
T 3goz_A 85 LNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAA 164 (362)
T ss_dssp EECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHT
T ss_pred EECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhc
Confidence 999999999877775444 4 8999999999999987765543 4 36999999999999853321 344
Q ss_pred Cc-cCcEEeccCCcCCCCCccc-------c-cCCcEEEeCCccccCC----cCchhhcC-CCcCcEEeccCccccccCC-
Q 004195 230 LK-NLRVFDVQDNYFGPRFPRL-------H-KKMVTLVLRNNRFQFG----LNPDELRS-YNQLQKLDISLNRFVGPFI- 294 (769)
Q Consensus 230 l~-~L~~l~l~~N~l~~~~p~~-------~-~~L~~L~l~~N~~~~~----i~p~~~~~-l~~L~~L~Ls~N~l~~~~~- 294 (769)
++ +|+.|++++|.+++..+.. . .+|+.|+|++|.++.. + +..+.. .++|++|+|++|.+++..+
T Consensus 165 ~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l-~~~l~~~~~~L~~L~Ls~N~l~~~~~~ 243 (362)
T 3goz_A 165 IPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAEL-AYIFSSIPNHVVSLNLCLNCLHGPSLE 243 (362)
T ss_dssp SCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHH-HHHHHHSCTTCCEEECCSSCCCCCCHH
T ss_pred CCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHH-HHHHhcCCCCceEEECcCCCCCcHHHH
Confidence 54 9999999999998766531 2 5899999999999852 3 445555 4599999999999987544
Q ss_pred ---ccCCCCCCCCEEEccCCcCCccc-------cccCCCCCCCcEEEccCCcCCCCCCcc
Q 004195 295 ---PSLLSLPSITYLDIHGNKLTGLL-------LQNMSCNPQLAFVDLSSNLLTGYLPSC 344 (769)
Q Consensus 295 ---~~~~~l~~L~~L~l~~N~l~~~~-------~~~~~~l~~L~~l~l~~N~l~g~~p~~ 344 (769)
..+..+++|+.|+|++|.+.+.. +..+..+++|+.||+++|.+....|..
T Consensus 244 ~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~~ 303 (362)
T 3goz_A 244 NLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSIP 303 (362)
T ss_dssp HHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCHH
T ss_pred HHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchHH
Confidence 34578899999999999965543 346778899999999999998764443
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.87 E-value=5.4e-24 Score=228.07 Aligned_cols=228 Identities=17% Similarity=0.187 Sum_probs=154.1
Q ss_pred eEecCCCeeEEEeCCCCCCCCCCCCCCCCCCCccccccCCC--CCCcEEEeecccccCCCCccccCCCcCceeeccCccc
Q 004195 71 LVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSL--SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYL 148 (769)
Q Consensus 71 v~C~~~~v~~l~l~~~~~~~~~~~l~~n~~~~~~~~~~~~l--~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l 148 (769)
+.|....++.+++.++... +..+..+ ++++.|++++|.+.+..+. +.++++|++|+|++|.+
T Consensus 42 ~~~~~~~~~~l~l~~~~~~---------------~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l 105 (336)
T 2ast_B 42 LASDESLWQTLDLTGKNLH---------------PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVI 105 (336)
T ss_dssp HHTCSTTSSEEECTTCBCC---------------HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEE
T ss_pred HhcCchhheeeccccccCC---------------HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCc
Confidence 4454445677777654322 3345556 7889999999998877665 56789999999999998
Q ss_pred CCc-CCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCC-CCccc-CCccccCCCCCCEEEccCc-ccccc-
Q 004195 149 SGS-IPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNN-SLSGF-LPVSLTGLQSLRVVSLSAN-HLSGE- 223 (769)
Q Consensus 149 ~g~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~l~~l~~L~~L~ls~N-~l~~~- 223 (769)
++. +|..+..+++|++|+|++|.+++..|..++.+++|++|+|++| .+++. ++..+.++++|++|++++| .+++.
T Consensus 106 ~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~ 185 (336)
T 2ast_B 106 EVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKH 185 (336)
T ss_dssp CHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHH
T ss_pred CHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHH
Confidence 866 8888889999999999999988888888888999999999998 67753 6667888889999999988 88753
Q ss_pred CCC-CCCCc-cCcEEeccCCc--CCCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCcc-ccccCCccCC
Q 004195 224 IPD-LRNLK-NLRVFDVQDNY--FGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNR-FVGPFIPSLL 298 (769)
Q Consensus 224 ~p~-l~~l~-~L~~l~l~~N~--l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~ 298 (769)
++. +..++ +|+.|++++|. ++. +.+ |..+..+++|++|++++|. +++..+..+.
T Consensus 186 ~~~~~~~l~~~L~~L~l~~~~~~~~~--------------------~~l-~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~ 244 (336)
T 2ast_B 186 VQVAVAHVSETITQLNLSGYRKNLQK--------------------SDL-STLVRRCPNLVHLDLSDSVMLKNDCFQEFF 244 (336)
T ss_dssp HHHHHHHSCTTCCEEECCSCGGGSCH--------------------HHH-HHHHHHCTTCSEEECTTCTTCCGGGGGGGG
T ss_pred HHHHHHhcccCCCEEEeCCCcccCCH--------------------HHH-HHHHhhCCCCCEEeCCCCCcCCHHHHHHHh
Confidence 333 56667 77777777773 331 112 3344455555555555555 4444444555
Q ss_pred CCCCCCEEEccCCc-CCccccccCCCCCCCcEEEccCC
Q 004195 299 SLPSITYLDIHGNK-LTGLLLQNMSCNPQLAFVDLSSN 335 (769)
Q Consensus 299 ~l~~L~~L~l~~N~-l~~~~~~~~~~l~~L~~l~l~~N 335 (769)
.+++|+.|++++|. ++......+..+++|+.|++++|
T Consensus 245 ~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 245 QLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp GCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 55555555555553 22211223445555555555555
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=99.87 E-value=1.3e-24 Score=243.53 Aligned_cols=260 Identities=22% Similarity=0.194 Sum_probs=167.5
Q ss_pred cccccCCCCCCcEEEeecccccCCCCcccc-----CCCcCceeeccCcccCCc----CCccccCCCcCCEEEcccCcCCc
Q 004195 104 FFSTLGSLSSLKVLSLVSLGLWGPLPGSIA-----HSSSLEILNLSSNYLSGS----IPVQISSLRNLQTLILDDNKFTG 174 (769)
Q Consensus 104 ~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~-----~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~L~~N~l~~ 174 (769)
++..+..+++|+.|+|++|.+++..+..+. .+++|++|+|++|++++. ++..+..+++|++|+|++|.++.
T Consensus 105 l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~ 184 (461)
T 1z7x_W 105 LSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINE 184 (461)
T ss_dssp HHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHH
T ss_pred HHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcch
Confidence 355667777777777777777543333222 245677777777777753 35556667777777777777765
Q ss_pred cCCccCc-----CCcCCCEEeccCCCCccc----CCccccCCCCCCEEEccCccccccC-----CC-CCCCccCcEEecc
Q 004195 175 AVPSELS-----LLQVLSVLSLKNNSLSGF----LPVSLTGLQSLRVVSLSANHLSGEI-----PD-LRNLKNLRVFDVQ 239 (769)
Q Consensus 175 ~~p~~~~-----~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~ls~N~l~~~~-----p~-l~~l~~L~~l~l~ 239 (769)
..+..+. .+++|++|+|++|.++.. ++..+..+++|+.|++++|.+++.. +. ...+++|+.|+++
T Consensus 185 ~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~ 264 (461)
T 1z7x_W 185 AGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIW 264 (461)
T ss_dssp HHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECT
T ss_pred HHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECc
Confidence 4443333 255777777777777653 4566667777777777777775431 11 2346777777777
Q ss_pred CCcCCCC----Cccc---ccCCcEEEeCCccccCCcCchhhcC-----CCcCcEEeccCcccccc----CCccCCCCCCC
Q 004195 240 DNYFGPR----FPRL---HKKMVTLVLRNNRFQFGLNPDELRS-----YNQLQKLDISLNRFVGP----FIPSLLSLPSI 303 (769)
Q Consensus 240 ~N~l~~~----~p~~---~~~L~~L~l~~N~~~~~i~p~~~~~-----l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L 303 (769)
+|.++.. ++.. .++|++|++++|.++... +..+.. .++|++|+|++|.+++. ++..+..+++|
T Consensus 265 ~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~-~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L 343 (461)
T 1z7x_W 265 ECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEG-ARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFL 343 (461)
T ss_dssp TSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHH-HHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSC
T ss_pred CCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHH-HHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCc
Confidence 7777653 3332 457777788777765321 222322 25777888887777654 34455666778
Q ss_pred CEEEccCCcCCccccccCCC-----CCCCcEEEccCCcCCC----CCCccccccCCCceEECCCCCCChh
Q 004195 304 TYLDIHGNKLTGLLLQNMSC-----NPQLAFVDLSSNLLTG----YLPSCLQVEAKTRLVLYSKNCLSNE 364 (769)
Q Consensus 304 ~~L~l~~N~l~~~~~~~~~~-----l~~L~~l~l~~N~l~g----~~p~~~~~~~~l~~l~l~~N~l~~~ 364 (769)
+.|+|++|.+++..+..+.. .++|+.|++++|.+++ .+|..+..+++++.+++++|.+++.
T Consensus 344 ~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~ 413 (461)
T 1z7x_W 344 LELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDA 413 (461)
T ss_dssp CEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHH
T ss_pred cEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHH
Confidence 88888888777654443332 5678888888887775 6677777777778888888777653
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2.3e-22 Score=209.06 Aligned_cols=142 Identities=11% Similarity=0.073 Sum_probs=113.5
Q ss_pred HHHHHHHhcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCC------------------ChhHHHHHHHHHhhc
Q 004195 472 LDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKS------------------SPHMYTYHIELISKL 533 (769)
Q Consensus 472 ~~el~~~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~------------------~~~~~~~Ei~~l~~l 533 (769)
+..+......|+..+.||+|+||.||+|+..+|+.||||.++..... ....+.+|+++++++
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l 161 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL 161 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence 34455555567778999999999999999977999999999743211 134588999999999
Q ss_pred cCCceeeEeeeeeccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCc
Q 004195 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNL 613 (769)
Q Consensus 534 ~H~nIv~l~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDl 613 (769)
+ | +++.+++.. + ..++||||+++|+|.+ +... ....++.|+++||+|||+. +|+||||
T Consensus 162 ~--~-~~v~~~~~~-~-------~~~lvmE~~~g~~L~~-l~~~-------~~~~i~~qi~~~l~~lH~~---giiHrDl 219 (282)
T 1zar_A 162 Q--G-LAVPKVYAW-E-------GNAVLMELIDAKELYR-VRVE-------NPDEVLDMILEEVAKFYHR---GIVHGDL 219 (282)
T ss_dssp T--T-SSSCCEEEE-E-------TTEEEEECCCCEEGGG-CCCS-------CHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred c--C-CCcCeEEec-c-------ceEEEEEecCCCcHHH-cchh-------hHHHHHHHHHHHHHHHHHC---CCEeCCC
Confidence 9 4 666665533 1 1599999999999998 5321 2346999999999999998 9999999
Q ss_pred cccceeeCCCceeeecCCCCchh
Q 004195 614 KITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 614 Kp~NILld~~~~~kl~DFGla~~ 636 (769)
||+|||++ ++.+||+|||+++.
T Consensus 220 kp~NILl~-~~~vkl~DFG~a~~ 241 (282)
T 1zar_A 220 SQYNVLVS-EEGIWIIDFPQSVE 241 (282)
T ss_dssp STTSEEEE-TTEEEECCCTTCEE
T ss_pred CHHHEEEE-CCcEEEEECCCCeE
Confidence 99999999 99999999999863
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.86 E-value=3.7e-23 Score=221.53 Aligned_cols=219 Identities=16% Similarity=0.123 Sum_probs=178.1
Q ss_pred CCcEEEeecccccCCCCccccCC--CcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCcc-CCccCcCCcCCCEE
Q 004195 113 SLKVLSLVSLGLWGPLPGSIAHS--SSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGA-VPSELSLLQVLSVL 189 (769)
Q Consensus 113 ~L~~L~L~~n~l~g~~p~~~~~l--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L 189 (769)
.++.|++++|.+. |..+..+ +++++|++++|.+++..|. +..+++|++|+|++|.+++. +|..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 4788999998876 5667777 8899999999999876665 66789999999999998866 88888999999999
Q ss_pred eccCCCCcccCCccccCCCCCCEEEccCc-ccccc-CCC-CCCCccCcEEeccCC-cCCCCCcccccCCcEEEeCCcccc
Q 004195 190 SLKNNSLSGFLPVSLTGLQSLRVVSLSAN-HLSGE-IPD-LRNLKNLRVFDVQDN-YFGPRFPRLHKKMVTLVLRNNRFQ 265 (769)
Q Consensus 190 ~L~~N~l~~~~p~~l~~l~~L~~L~ls~N-~l~~~-~p~-l~~l~~L~~l~l~~N-~l~~~~p~~~~~L~~L~l~~N~~~ 265 (769)
+|++|.+++..|..++++++|++|++++| .+++. ++. +..+++|+.|++++| .++
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~--------------------- 182 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFT--------------------- 182 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCC---------------------
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcC---------------------
Confidence 99999998888888889999999999998 67652 333 556666766666666 543
Q ss_pred CC-cCchhhcCCC-cCcEEeccCc--ccc-ccCCccCCCCCCCCEEEccCCc-CCccccccCCCCCCCcEEEccCCcCCC
Q 004195 266 FG-LNPDELRSYN-QLQKLDISLN--RFV-GPFIPSLLSLPSITYLDIHGNK-LTGLLLQNMSCNPQLAFVDLSSNLLTG 339 (769)
Q Consensus 266 ~~-i~p~~~~~l~-~L~~L~Ls~N--~l~-~~~~~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~l~~L~~l~l~~N~l~g 339 (769)
.. + +..+..++ +|++|++++| .++ +.++..+.++++|+.|++++|. +++..+..+..+++|+.|++++|. +
T Consensus 183 ~~~~-~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~--~ 259 (336)
T 2ast_B 183 EKHV-QVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY--D 259 (336)
T ss_dssp HHHH-HHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT--T
T ss_pred hHHH-HHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC--C
Confidence 21 2 66788899 9999999999 555 4566777889999999999999 888888899999999999999996 3
Q ss_pred CCCc---cccccCCCceEECCCC
Q 004195 340 YLPS---CLQVEAKTRLVLYSKN 359 (769)
Q Consensus 340 ~~p~---~~~~~~~l~~l~l~~N 359 (769)
..|. .+..+++++.+++++|
T Consensus 260 ~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 260 IIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp CCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCHHHHHHHhcCCCCCEEeccCc
Confidence 3344 5677899999999988
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.1e-21 Score=207.18 Aligned_cols=207 Identities=23% Similarity=0.308 Sum_probs=167.8
Q ss_pred EeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCc
Q 004195 118 SLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLS 197 (769)
Q Consensus 118 ~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 197 (769)
.+..+.+...+ .+.++++|++|++++|.++. +| .+..+++|++|+|++|++++. |. +..+++|++|+|++|.++
T Consensus 25 ~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l~ 98 (308)
T 1h6u_A 25 AAGKSNVTDTV--TQADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPLK 98 (308)
T ss_dssp HTTCSSTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCCS
T ss_pred HhCCCCcCcee--cHHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcCC
Confidence 44445554432 35678889999999999884 55 688899999999999999854 44 889999999999999988
Q ss_pred ccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCC
Q 004195 198 GFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYN 277 (769)
Q Consensus 198 ~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~ 277 (769)
+. ..+.++++|+.|++++|++++. +.+..+++|+.|++++|.+++ + +. +..++
T Consensus 99 ~~--~~~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~~----------------------~-~~-l~~l~ 151 (308)
T 1h6u_A 99 NV--SAIAGLQSIKTLDLTSTQITDV-TPLAGLSNLQVLYLDLNQITN----------------------I-SP-LAGLT 151 (308)
T ss_dssp CC--GGGTTCTTCCEEECTTSCCCCC-GGGTTCTTCCEEECCSSCCCC----------------------C-GG-GGGCT
T ss_pred Cc--hhhcCCCCCCEEECCCCCCCCc-hhhcCCCCCCEEECCCCccCc----------------------C-cc-ccCCC
Confidence 63 3688899999999999998864 447777777777777776542 2 22 78899
Q ss_pred cCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECC
Q 004195 278 QLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYS 357 (769)
Q Consensus 278 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~ 357 (769)
+|++|+|++|.+++..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|++++..| +..+++++.++++
T Consensus 152 ~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~ 225 (308)
T 1h6u_A 152 NLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLT 225 (308)
T ss_dssp TCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEE
T ss_pred CccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEcc
Confidence 99999999999987433 8999999999999999998655 7889999999999999997664 7788999999999
Q ss_pred CCCCCh
Q 004195 358 KNCLSN 363 (769)
Q Consensus 358 ~N~l~~ 363 (769)
+|.+++
T Consensus 226 ~N~i~~ 231 (308)
T 1h6u_A 226 NQTITN 231 (308)
T ss_dssp EEEEEC
T ss_pred CCeeec
Confidence 998865
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.2e-21 Score=194.42 Aligned_cols=178 Identities=21% Similarity=0.179 Sum_probs=142.8
Q ss_pred CCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEe
Q 004195 111 LSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLS 190 (769)
Q Consensus 111 l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 190 (769)
.++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+
T Consensus 27 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 106 (208)
T 2o6s_A 27 PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELA 106 (208)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEE
Confidence 35899999999999887777889999999999999999977677789999999999999999977777789999999999
Q ss_pred ccCCCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcC
Q 004195 191 LKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLN 269 (769)
Q Consensus 191 L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~ 269 (769)
|++|.+++..+..|.++++|+.|++++|++++.++. +..+++|+.|++++|.+.+.
T Consensus 107 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~----------------------- 163 (208)
T 2o6s_A 107 LNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT----------------------- 163 (208)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC-----------------------
T ss_pred cCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC-----------------------
Confidence 999999987777889999999999999999977665 67788888888877765432
Q ss_pred chhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccC
Q 004195 270 PDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNM 321 (769)
Q Consensus 270 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 321 (769)
+++|++|+++.|+++|.+|..++.++. ++..+...+..+..+
T Consensus 164 ------~~~l~~L~~~~n~~~g~ip~~~~~l~~----~~~~C~~~~~~~~~~ 205 (208)
T 2o6s_A 164 ------CPGIRYLSEWINKHSGVVRNSAGSVAP----DSAKCSGSGKPVRSI 205 (208)
T ss_dssp ------TTTTHHHHHHHHHCTTTBBCTTSSBCT----TCSBBTTTCCBGGGC
T ss_pred ------CCCHHHHHHHHHhCCceeeccCccccC----CccccccCCCcceee
Confidence 345677777777777777777776654 334444444444433
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.9e-21 Score=220.53 Aligned_cols=188 Identities=25% Similarity=0.364 Sum_probs=127.8
Q ss_pred CCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEec
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL 191 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 191 (769)
.+|+.|+|++|++++ +|..+. ++|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. |.+ +|++|+|
T Consensus 59 ~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~L 127 (571)
T 3cvr_A 59 NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDV 127 (571)
T ss_dssp TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEEC
T ss_pred CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEEC
Confidence 378888888888876 676553 77888888888888 567 456888888888888886 666 655 8888888
Q ss_pred cCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCch
Q 004195 192 KNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPD 271 (769)
Q Consensus 192 ~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~ 271 (769)
++|.|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|++++|.+++ + |.
T Consensus 128 s~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~--~l~~L~~L~Ls~N~L~~----------------------l-p~ 177 (571)
T 3cvr_A 128 DNNQLTM-LPE---LPALLEYINADNNQLTM-LPE--LPTSLEVLSVRNNQLTF----------------------L-PE 177 (571)
T ss_dssp CSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC--CCTTCCEEECCSSCCSC----------------------C-CC
T ss_pred CCCcCCC-CCC---cCccccEEeCCCCccCc-CCC--cCCCcCEEECCCCCCCC----------------------c-ch
Confidence 8888886 555 57788888888888876 444 45666666666666654 2 32
Q ss_pred hhcCCCcCcEEeccCccccccCCccCCCCCCC-------CEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCcc
Q 004195 272 ELRSYNQLQKLDISLNRFVGPFIPSLLSLPSI-------TYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSC 344 (769)
Q Consensus 272 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L-------~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~ 344 (769)
+. ++|+.|+|++|+|+ .+|. +.. +| +.|+|++|+|+. +|..+..+++|+.|+|++|.+++.+|..
T Consensus 178 -l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~L~~N~l~~~~p~~ 249 (571)
T 3cvr_A 178 -LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRITH-IPENILSLDPTCTIILEDNPLSSRIRES 249 (571)
T ss_dssp -CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCCC-CCGGGGGSCTTEEEECCSSSCCHHHHHH
T ss_pred -hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCccee-cCHHHhcCCCCCEEEeeCCcCCCcCHHH
Confidence 32 55666666666665 3444 433 45 777777777764 4555555777777777777777766666
Q ss_pred cccc
Q 004195 345 LQVE 348 (769)
Q Consensus 345 ~~~~ 348 (769)
+..+
T Consensus 250 l~~l 253 (571)
T 3cvr_A 250 LSQQ 253 (571)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5543
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.86 E-value=3.4e-21 Score=218.46 Aligned_cols=219 Identities=24% Similarity=0.330 Sum_probs=162.2
Q ss_pred CCCCCCCCCCCCCCCCCCCcce-EecCCCeeEEEeCCCCCCCCCCCCCCCCCCCccccccCCCCCCcEEEeecccccCCC
Q 004195 50 SSFNTTTVTDFCNIEPTPSLTL-VCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPL 128 (769)
Q Consensus 50 ~~w~~~~~~~~c~~~~~~~~~v-~C~~~~v~~l~l~~~~~~~~~~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~ 128 (769)
.+|.... ++|......|.++ .|..++++.|+++++.+.. +|..+ +++|+.|+|++|+++ .+
T Consensus 34 ~~W~~~~--~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L~~-------------lp~~l--~~~L~~L~Ls~N~l~-~i 95 (571)
T 3cvr_A 34 DKWEKQA--LPGENRNEAVSLLKECLINQFSELQLNRLNLSS-------------LPDNL--PPQITVLEITQNALI-SL 95 (571)
T ss_dssp HHHHTTC--CTTCCHHHHHHHHHHHHHTTCSEEECCSSCCSC-------------CCSCC--CTTCSEEECCSSCCS-CC
T ss_pred HHHhccC--CccccccchhhhccccccCCccEEEeCCCCCCc-------------cCHhH--cCCCCEEECcCCCCc-cc
Confidence 4575544 6773211112357 6877789999998876653 22333 378999999999997 67
Q ss_pred CccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCC
Q 004195 129 PGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQ 208 (769)
Q Consensus 129 p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 208 (769)
| ..+++|++|+|++|+|++ +|. |.+ +|++|+|++|+|++ +|. .+++|++|+|++|.|++ +|. .++
T Consensus 96 p---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~ 160 (571)
T 3cvr_A 96 P---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPT 160 (571)
T ss_dssp C---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCT
T ss_pred c---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCC
Confidence 7 568999999999999997 887 776 99999999999997 676 68999999999999997 665 678
Q ss_pred CCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCcc
Q 004195 209 SLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNR 288 (769)
Q Consensus 209 ~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~ 288 (769)
+|+.|+|++|+|++ +|.+. ++|+.|++++|.|+ .+|....+| ....+.|+.|+|++|+
T Consensus 161 ~L~~L~Ls~N~L~~-lp~l~--~~L~~L~Ls~N~L~-~lp~~~~~L------------------~~~~~~L~~L~Ls~N~ 218 (571)
T 3cvr_A 161 SLEVLSVRNNQLTF-LPELP--ESLEALDVSTNLLE-SLPAVPVRN------------------HHSEETEIFFRCRENR 218 (571)
T ss_dssp TCCEEECCSSCCSC-CCCCC--TTCCEEECCSSCCS-SCCCCC--------------------------CCEEEECCSSC
T ss_pred CcCEEECCCCCCCC-cchhh--CCCCEEECcCCCCC-chhhHHHhh------------------hcccccceEEecCCCc
Confidence 99999999999998 55555 88888888888876 333211111 0112234788888888
Q ss_pred ccccCCccCCCCCCCCEEEccCCcCCccccccCCCC
Q 004195 289 FVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCN 324 (769)
Q Consensus 289 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 324 (769)
|+. +|..+..+++|+.|+|++|.+++.+|..+..+
T Consensus 219 l~~-lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 219 ITH-IPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp CCC-CCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred cee-cCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 874 67777778888888888888888777766554
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=99.85 E-value=5.8e-24 Score=238.25 Aligned_cols=255 Identities=21% Similarity=0.158 Sum_probs=153.0
Q ss_pred cCCCCCCcEEEeecccccC----CCCccccCCCcCceeeccCcccCCcCCccc-cCCC----cCCEEEcccCcCCc----
Q 004195 108 LGSLSSLKVLSLVSLGLWG----PLPGSIAHSSSLEILNLSSNYLSGSIPVQI-SSLR----NLQTLILDDNKFTG---- 174 (769)
Q Consensus 108 ~~~l~~L~~L~L~~n~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~-~~l~----~L~~L~L~~N~l~~---- 174 (769)
+..+++|++|+|++|+++. .++..+..+++|++|+|++|.++...+..+ ..++ +|++|+|++|+++.
T Consensus 24 ~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~ 103 (461)
T 1z7x_W 24 LPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCG 103 (461)
T ss_dssp HHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHH
T ss_pred HhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHH
Confidence 5556677777777777653 345566667777777777777765433333 2344 57777777777763
Q ss_pred cCCccCcCCcCCCEEeccCCCCcccCCcccc-----CCCCCCEEEccCccccccC----C-CCCCCccCcEEeccCCcCC
Q 004195 175 AVPSELSLLQVLSVLSLKNNSLSGFLPVSLT-----GLQSLRVVSLSANHLSGEI----P-DLRNLKNLRVFDVQDNYFG 244 (769)
Q Consensus 175 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~-----~l~~L~~L~ls~N~l~~~~----p-~l~~l~~L~~l~l~~N~l~ 244 (769)
.+|..+..+++|++|+|++|.++...+..+. ..++|++|++++|++++.. + .+..+++|+.|++++|.++
T Consensus 104 ~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~ 183 (461)
T 1z7x_W 104 VLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDIN 183 (461)
T ss_dssp HHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCH
T ss_pred HHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcc
Confidence 4566677777777777777776644333222 2456777777777766532 1 1445567777777777665
Q ss_pred CCCccc--------ccCCcEEEeCCccccCC----cCchhhcCCCcCcEEeccCccccccC-----CccCCCCCCCCEEE
Q 004195 245 PRFPRL--------HKKMVTLVLRNNRFQFG----LNPDELRSYNQLQKLDISLNRFVGPF-----IPSLLSLPSITYLD 307 (769)
Q Consensus 245 ~~~p~~--------~~~L~~L~l~~N~~~~~----i~p~~~~~l~~L~~L~Ls~N~l~~~~-----~~~~~~l~~L~~L~ 307 (769)
...+.. ..+|+.|++++|.++.. + +..+..+++|++|++++|.+.... +..+..+++|+.|+
T Consensus 184 ~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l-~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~ 262 (461)
T 1z7x_W 184 EAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDL-CGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLW 262 (461)
T ss_dssp HHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHH-HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEE
T ss_pred hHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHH-HHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEE
Confidence 432211 23677777777766642 2 455566677777777777665432 12223466777777
Q ss_pred ccCCcCCcc----ccccCCCCCCCcEEEccCCcCCCCCCccccc-----cCCCceEECCCCCCCh
Q 004195 308 IHGNKLTGL----LLQNMSCNPQLAFVDLSSNLLTGYLPSCLQV-----EAKTRLVLYSKNCLSN 363 (769)
Q Consensus 308 l~~N~l~~~----~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~-----~~~l~~l~l~~N~l~~ 363 (769)
+++|+++.. ++..+..+++|+.|++++|.++...+..+.. .++++.+++++|.+++
T Consensus 263 L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~ 327 (461)
T 1z7x_W 263 IWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTA 327 (461)
T ss_dssp CTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBG
T ss_pred CcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCch
Confidence 777776654 4555555667777777777665433333322 1456677777766654
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.85 E-value=8.3e-21 Score=188.42 Aligned_cols=178 Identities=21% Similarity=0.233 Sum_probs=110.3
Q ss_pred EEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCC
Q 004195 116 VLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNS 195 (769)
Q Consensus 116 ~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 195 (769)
.++.+++.++ .+|..+ .++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|.
T Consensus 11 ~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 87 (208)
T 2o6s_A 11 TVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQ 87 (208)
T ss_dssp EEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCc
Confidence 3455555553 234333 3578888888888886666667788888888888888876666667778888888888888
Q ss_pred CcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcC
Q 004195 196 LSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRS 275 (769)
Q Consensus 196 l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~ 275 (769)
+++..+..|.++++|++|+|++|++++..+. .+..
T Consensus 88 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~---------------------------------------------~~~~ 122 (208)
T 2o6s_A 88 LQSLPNGVFDKLTQLKELALNTNQLQSLPDG---------------------------------------------VFDK 122 (208)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTT---------------------------------------------TTTT
T ss_pred CCccCHhHhcCccCCCEEEcCCCcCcccCHh---------------------------------------------Hhcc
Confidence 7766666677777777777777777654433 2333
Q ss_pred CCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCcccccc
Q 004195 276 YNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVE 348 (769)
Q Consensus 276 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~ 348 (769)
+++|++|+|++|++++..+..+..+++|+.|++++|.+.+ .++.|++|+++.|+++|.+|..++.+
T Consensus 123 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l 188 (208)
T 2o6s_A 123 LTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSV 188 (208)
T ss_dssp CTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSB
T ss_pred CCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccc
Confidence 4444444454444444333334555555555555554443 23455555666666666666555443
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.3e-20 Score=202.80 Aligned_cols=220 Identities=16% Similarity=0.108 Sum_probs=136.8
Q ss_pred CCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCc-cccCCCcCCE-EEcccCcCCccCCccCcCCcCCCEE
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPV-QISSLRNLQT-LILDDNKFTGAVPSELSLLQVLSVL 189 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~-L~L~~N~l~~~~p~~~~~l~~L~~L 189 (769)
++++.|+|++|+|+...+..|.++++|++|+|++|++.+.+|. .|.+|++|++ ++++.|+++...|..|..+++|++|
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L 109 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 109 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEE
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccc
Confidence 5688899999998766566788899999999999988766654 5788888764 6667788887778888888888888
Q ss_pred eccCCCCcccCCccccCCCCCCEEEccC-ccccccCCC-CCCCc-cCcEEeccCCcCCCCCcccccCCcEEEeCCccccC
Q 004195 190 SLKNNSLSGFLPVSLTGLQSLRVVSLSA-NHLSGEIPD-LRNLK-NLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQF 266 (769)
Q Consensus 190 ~L~~N~l~~~~p~~l~~l~~L~~L~ls~-N~l~~~~p~-l~~l~-~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~ 266 (769)
++++|.+++..+..+....++..|++.+ |++....+. +..+. .|+.|++++|.++.
T Consensus 110 ~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~--------------------- 168 (350)
T 4ay9_X 110 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE--------------------- 168 (350)
T ss_dssp EEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE---------------------
T ss_pred cccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC---------------------
Confidence 8888888877777777777788888865 445543332 33333 45666666666542
Q ss_pred CcCchhhcCCCcCcEEeccC-ccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccc
Q 004195 267 GLNPDELRSYNQLQKLDISL-NRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCL 345 (769)
Q Consensus 267 ~i~p~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~ 345 (769)
+ |.......+|++|++++ |.+....+..|.++++|+.|+|++|+|+...+..+. +|+.|.+.++.--..+|+ +
T Consensus 169 -i-~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~---~L~~L~~l~~~~l~~lP~-l 242 (350)
T 4ay9_X 169 -I-HNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLE---NLKKLRARSTYNLKKLPT-L 242 (350)
T ss_dssp -E-CTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCT---TCCEEECTTCTTCCCCCC-T
T ss_pred -C-ChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhc---cchHhhhccCCCcCcCCC-c
Confidence 2 22222334555555553 333332223455555666666666665554443333 333333333222224442 4
Q ss_pred cccCCCceEECCC
Q 004195 346 QVEAKTRLVLYSK 358 (769)
Q Consensus 346 ~~~~~l~~l~l~~ 358 (769)
..+++|+.+++++
T Consensus 243 ~~l~~L~~l~l~~ 255 (350)
T 4ay9_X 243 EKLVALMEASLTY 255 (350)
T ss_dssp TTCCSCCEEECSC
T ss_pred hhCcChhhCcCCC
Confidence 4455555555543
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.83 E-value=6.2e-20 Score=197.54 Aligned_cols=212 Identities=16% Similarity=0.110 Sum_probs=159.2
Q ss_pred EEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCC-ccCcCCcCCCE-EeccC
Q 004195 116 VLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVP-SELSLLQVLSV-LSLKN 193 (769)
Q Consensus 116 ~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~L~~ 193 (769)
+++.++++++ .+|..+ .++|++|+|++|+|+...+..|.+|++|++|+|++|++.+.+| ..|.++++|+. +.++.
T Consensus 13 ~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 4566677775 467665 3689999999999996555679999999999999999877665 46889988875 66778
Q ss_pred CCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchh
Q 004195 194 NSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDE 272 (769)
Q Consensus 194 N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~ 272 (769)
|+++...|..|.++++|++|++++|++++..+. +....++..+++.++ |.+. .+.+..
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~--------------------~~i~-~l~~~~ 148 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDN--------------------INIH-TIERNS 148 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESC--------------------TTCC-EECTTS
T ss_pred CcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccc--------------------cccc-cccccc
Confidence 999988899999999999999999999865543 334445555555442 1222 232444
Q ss_pred hcCC-CcCcEEeccCccccccCCccCCCCCCCCEEEccC-CcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCC
Q 004195 273 LRSY-NQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHG-NKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAK 350 (769)
Q Consensus 273 ~~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~-N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~ 350 (769)
|..+ ..++.|+|++|+|+. +++......+|+.|++++ |.++...+..|..+++|+.|||++|+|+...+..+..+..
T Consensus 149 f~~~~~~l~~L~L~~N~i~~-i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~ 227 (350)
T 4ay9_X 149 FVGLSFESVILWLNKNGIQE-IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKK 227 (350)
T ss_dssp STTSBSSCEEEECCSSCCCE-ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCE
T ss_pred hhhcchhhhhhccccccccC-CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchH
Confidence 5555 368899999999986 555555667899999975 6677666678899999999999999999766655554444
Q ss_pred Cc
Q 004195 351 TR 352 (769)
Q Consensus 351 l~ 352 (769)
++
T Consensus 228 L~ 229 (350)
T 4ay9_X 228 LR 229 (350)
T ss_dssp EE
T ss_pred hh
Confidence 33
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.82 E-value=1e-19 Score=183.29 Aligned_cols=136 Identities=24% Similarity=0.188 Sum_probs=124.3
Q ss_pred CCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEec
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL 191 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 191 (769)
++|++|+|++|++++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 78999999999999999999999999999999999998766677899999999999999999877888999999999999
Q ss_pred cCCCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCCCc
Q 004195 192 KNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFP 248 (769)
Q Consensus 192 ~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p 248 (769)
++|+++ .+|..+.++++|++|+|++|+|++..+. +..+++|+.|++++|.+.+..+
T Consensus 120 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 120 CCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred cCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 999999 7899999999999999999999987765 7889999999999998876554
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.81 E-value=2.4e-20 Score=213.83 Aligned_cols=173 Identities=25% Similarity=0.341 Sum_probs=84.8
Q ss_pred CCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCE
Q 004195 109 GSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSV 188 (769)
Q Consensus 109 ~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 188 (769)
..|++|+.|+|++|.+.. +| .|..|++|+.|+|++|+|++..| +..|++|+.|+|++|.+++ +| .+..+++|+.
T Consensus 40 ~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~ 113 (605)
T 1m9s_A 40 NELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKS 113 (605)
T ss_dssp HHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCE
T ss_pred hcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCE
Confidence 344455555555555432 22 34555555555555555553322 4555555555555555543 22 3455555555
Q ss_pred EeccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCc
Q 004195 189 LSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGL 268 (769)
Q Consensus 189 L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i 268 (769)
|+|++|.+++. ..+..|++|+.|+|++|++++. +.+..+++|+.|+|++|.+ ++..
T Consensus 114 L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l---------------------~~~~ 169 (605)
T 1m9s_A 114 LSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQI---------------------SDIV 169 (605)
T ss_dssp EECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSEEECCSSCC---------------------CCCG
T ss_pred EEecCCCCCCC--ccccCCCccCEEECCCCccCCc-hhhcccCCCCEEECcCCcC---------------------CCch
Confidence 55555555432 2344555555555555555433 3344444444444444443 3221
Q ss_pred CchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCcc
Q 004195 269 NPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGL 316 (769)
Q Consensus 269 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 316 (769)
| +..+++|+.|+|++|+|++. +.+..+++|+.|+|++|.+++.
T Consensus 170 -~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 170 -P--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp -G--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred -h--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 2 55555666666666665552 3455566666666666655553
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.81 E-value=3.6e-21 Score=226.26 Aligned_cols=200 Identities=19% Similarity=0.185 Sum_probs=110.5
Q ss_pred CCHHHHHHHHHHHHhcCCC--CCCCCCCCCCCCCCCCCCCCCCcceEecCCCeeEEEeCCCCCCCCCCCCCCCCCCCccc
Q 004195 28 LQLFQYQTLVRIQQLLNYP--SVSSSFNTTTVTDFCNIEPTPSLTLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFF 105 (769)
Q Consensus 28 ~~~~~~~~ll~~k~~~~~~--~~l~~w~~~~~~~~c~~~~~~~~~v~C~~~~v~~l~l~~~~~~~~~~~l~~n~~~~~~~ 105 (769)
....++++|+++...+... .....|..... ..+.|. ++.++..+++.|++.++.....+
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~s~~~~~~l~L~~n~~~~~~------------- 189 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTGDST-PSGTAT-----NSAVSTPLTPKIELFANGKDEAN------------- 189 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcCCCC-ccccCC-----CceecCCccceEEeeCCCCCcch-------------
Confidence 4456778999999876322 12344543321 345664 35666677888888765543211
Q ss_pred cccCCCCC-----CcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccC
Q 004195 106 STLGSLSS-----LKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSEL 180 (769)
Q Consensus 106 ~~~~~l~~-----L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 180 (769)
..+..... +..++++.|.+. ..|..|..+.+|+.|+|++|.+. .+|..+.+|++|++|+|++|.|+ .+|..|
T Consensus 190 ~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~ 266 (727)
T 4b8c_D 190 QALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEI 266 (727)
T ss_dssp ---------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGG
T ss_pred hhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhh
Confidence 11111111 122233334433 45778888999999999999988 68888888999999999999998 888889
Q ss_pred cCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCccc
Q 004195 181 SLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRL 250 (769)
Q Consensus 181 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~ 250 (769)
++|++|++|+|++|.|+ .+|..|++|++|++|+|++|.|+..+..++.+++|+.|+|++|.|++.+|..
T Consensus 267 ~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~ 335 (727)
T 4b8c_D 267 KNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLEKQFLKI 335 (727)
T ss_dssp GGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCCCCCSSTTSCTTCCCEECTTSCCCSHHHHH
T ss_pred hCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCCccChhhhcCCCccEEeCCCCccCCCChHH
Confidence 99999999999999998 6788899999999999999998755456888888888888888887766654
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.7e-19 Score=188.78 Aligned_cols=171 Identities=25% Similarity=0.320 Sum_probs=89.4
Q ss_pred CCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEE
Q 004195 134 HSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVV 213 (769)
Q Consensus 134 ~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 213 (769)
.+++|++|++++|.++. +| .+..+++|++|+|++|++++..| +..+++|++|+|++|.+++ + ..+.++++|++|
T Consensus 44 ~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L 117 (291)
T 1h6t_A 44 ELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-L-SSLKDLKKLKSL 117 (291)
T ss_dssp HHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-G-GGGTTCTTCCEE
T ss_pred hcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-C-hhhccCCCCCEE
Confidence 44445555555555442 22 24445555555555555543222 4555555555555555543 1 225555555555
Q ss_pred EccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccC
Q 004195 214 SLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPF 293 (769)
Q Consensus 214 ~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~ 293 (769)
++++|++++ ++.+..+++|+.|++++|.+++ + ..+..+++|+.|+|++|++++..
T Consensus 118 ~L~~n~i~~-~~~l~~l~~L~~L~l~~n~l~~----------------------~--~~l~~l~~L~~L~L~~N~l~~~~ 172 (291)
T 1h6t_A 118 SLEHNGISD-INGLVHLPQLESLYLGNNKITD----------------------I--TVLSRLTKLDTLSLEDNQISDIV 172 (291)
T ss_dssp ECTTSCCCC-CGGGGGCTTCCEEECCSSCCCC----------------------C--GGGGGCTTCSEEECCSSCCCCCG
T ss_pred ECCCCcCCC-ChhhcCCCCCCEEEccCCcCCc----------------------c--hhhccCCCCCEEEccCCccccch
Confidence 555555544 2344445555555554444431 1 23445556666666666665533
Q ss_pred CccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCC
Q 004195 294 IPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTG 339 (769)
Q Consensus 294 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g 339 (769)
+ +..+++|+.|++++|++++. + .+..+++|+.|++++|.++.
T Consensus 173 ~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 173 P--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp G--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred h--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 3 56666666666666666653 2 35666667777777776664
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.6e-19 Score=206.94 Aligned_cols=198 Identities=22% Similarity=0.257 Sum_probs=156.9
Q ss_pred CCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEe
Q 004195 111 LSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLS 190 (769)
Q Consensus 111 l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 190 (769)
+..+..++|..+.+...++ +..|.+|+.|+|++|.++. +| .|..|++|+.|+|++|++++..| +..+++|+.|+
T Consensus 20 l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 93 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLF 93 (605)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEE
T ss_pred HHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEE
Confidence 4455566677777765543 5678888889999998874 44 58888899999999998886544 88888888999
Q ss_pred ccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCc
Q 004195 191 LKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNP 270 (769)
Q Consensus 191 L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p 270 (769)
|++|.+++ +| .+..+++|+.|+|++|++++ ++.+..+++|+.|+|++|.++ + +
T Consensus 94 Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l~~l~~l~~L~~L~Ls~N~l~---------------------~-l-- 146 (605)
T 1m9s_A 94 LDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-INGLVHLPQLESLYLGNNKIT---------------------D-I-- 146 (605)
T ss_dssp CCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-CGGGGGCTTCSEEECCSSCCC---------------------C-C--
T ss_pred CcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-CccccCCCccCEEECCCCccC---------------------C-c--
Confidence 98888885 33 68888888888888888876 456777777777777766654 2 2
Q ss_pred hhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccc
Q 004195 271 DELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCL 345 (769)
Q Consensus 271 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~ 345 (769)
..+..+++|+.|+|++|.+.+..| +..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++++.....+
T Consensus 147 ~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~ 217 (605)
T 1m9s_A 147 TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPINHQ 217 (605)
T ss_dssp GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCCCCC
T ss_pred hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCccccc
Confidence 467889999999999999998665 99999999999999999985 468899999999999999987644433
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.80 E-value=2.1e-19 Score=187.95 Aligned_cols=176 Identities=25% Similarity=0.322 Sum_probs=147.8
Q ss_pred ccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCC
Q 004195 107 TLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVL 186 (769)
Q Consensus 107 ~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 186 (769)
.+..+++|+.|++++|.+... | .+..+++|++|+|++|++++..| +.++++|++|+|++|++++ +| .+..+++|
T Consensus 41 ~~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L 114 (291)
T 1h6t_A 41 TQNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKL 114 (291)
T ss_dssp CHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTC
T ss_pred chhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCC
Confidence 356789999999999998654 4 48999999999999999996544 9999999999999999985 33 49999999
Q ss_pred CEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccC
Q 004195 187 SVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQF 266 (769)
Q Consensus 187 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~ 266 (769)
++|+|++|.+++. ..+..+++|+.|++++|++++. +.+..+++|+.|++++|.+++
T Consensus 115 ~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~--------------------- 170 (291)
T 1h6t_A 115 KSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISD--------------------- 170 (291)
T ss_dssp CEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCC---------------------
T ss_pred CEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCcccc---------------------
Confidence 9999999999864 5788999999999999999875 667788888877777776642
Q ss_pred CcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccc
Q 004195 267 GLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLL 317 (769)
Q Consensus 267 ~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 317 (769)
+ +. +..+++|+.|+|++|.+++. +.+..+++|+.|++++|.++...
T Consensus 171 -~-~~-l~~l~~L~~L~L~~N~i~~l--~~l~~l~~L~~L~l~~n~i~~~~ 216 (291)
T 1h6t_A 171 -I-VP-LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKP 216 (291)
T ss_dssp -C-GG-GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEEEEEEEEECCC
T ss_pred -c-hh-hcCCCccCEEECCCCcCCCC--hhhccCCCCCEEECcCCcccCCc
Confidence 2 22 77889999999999999873 45899999999999999988743
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=7.6e-22 Score=225.00 Aligned_cols=190 Identities=20% Similarity=0.221 Sum_probs=116.7
Q ss_pred cCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCc-------------CCccCCccCcCCcCCCEEe-ccCC----
Q 004195 133 AHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNK-------------FTGAVPSELSLLQVLSVLS-LKNN---- 194 (769)
Q Consensus 133 ~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~-------------l~~~~p~~~~~l~~L~~L~-L~~N---- 194 (769)
..+++|+.|+|++|+|+ .+|.++++|++|+.|++++|. +.+.+|..++++++|+.|+ ++.|
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~ 424 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDD 424 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccch
Confidence 34555555555555554 455555555555555554443 3445555555555555555 4443
Q ss_pred ---------CCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCcccc
Q 004195 195 ---------SLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQ 265 (769)
Q Consensus 195 ---------~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~ 265 (769)
.++...+ ..|+.|+|++|+|++ +|.++.+++|+.|++++|.+ +
T Consensus 425 L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~~~~l~~L~~L~Ls~N~l---------------------~ 476 (567)
T 1dce_A 425 LRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCHLEQLLLVTHLDLSHNRL---------------------R 476 (567)
T ss_dssp HHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCCGGGGTTCCEEECCSSCC---------------------C
T ss_pred hhhhhhhcccccccCc------cCceEEEecCCCCCC-CcCccccccCcEeecCcccc---------------------c
Confidence 3332111 135566666666654 34455555555555555444 4
Q ss_pred CCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccc-cccCCCCCCCcEEEccCCcCCCCCCcc
Q 004195 266 FGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLL-LQNMSCNPQLAFVDLSSNLLTGYLPSC 344 (769)
Q Consensus 266 ~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~l~~L~~l~l~~N~l~g~~p~~ 344 (769)
.+ |..++.+++|+.|+|++|+|++ +| .++++++|+.|+|++|+|++.. |..++.+++|+.|+|++|++++.+|..
T Consensus 477 -~l-p~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~ 552 (567)
T 1dce_A 477 -AL-PPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQ 552 (567)
T ss_dssp -CC-CGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCT
T ss_pred -cc-chhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHH
Confidence 44 6777888888888888888887 45 7888888888888888888876 788888888888888888888776643
Q ss_pred c---cccCCCceEE
Q 004195 345 L---QVEAKTRLVL 355 (769)
Q Consensus 345 ~---~~~~~l~~l~ 355 (769)
. ..+++++.|+
T Consensus 553 ~~l~~~lp~L~~L~ 566 (567)
T 1dce_A 553 ERLAEMLPSVSSIL 566 (567)
T ss_dssp THHHHHCTTCSEEE
T ss_pred HHHHHHCcccCccC
Confidence 2 2245566554
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-18 Score=174.50 Aligned_cols=136 Identities=20% Similarity=0.247 Sum_probs=121.4
Q ss_pred CCCcEEEeecccccCCCC-ccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEe
Q 004195 112 SSLKVLSLVSLGLWGPLP-GSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLS 190 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 190 (769)
..++.|+|++|++++..| ..|.++++|++|+|++|+|++..|..|.++++|++|+|++|++++..|..|.++++|++|+
T Consensus 32 ~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 111 (220)
T 2v70_A 32 QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLM 111 (220)
T ss_dssp TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEE
T ss_pred CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEE
Confidence 346899999999988755 5689999999999999999988888999999999999999999988888899999999999
Q ss_pred ccCCCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCCC
Q 004195 191 LKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRF 247 (769)
Q Consensus 191 L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~ 247 (769)
|++|++++..|..|.++++|++|+|++|++++..|. +..+++|+.|++++|.+.+..
T Consensus 112 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 112 LRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp CTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred CCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 999999999999999999999999999999988664 788888888888888876543
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.79 E-value=4.3e-19 Score=177.49 Aligned_cols=134 Identities=24% Similarity=0.287 Sum_probs=122.6
Q ss_pred CCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEec
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL 191 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 191 (769)
++|+.|+|++|++++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|+...+..|..+++|++|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 57999999999999888889999999999999999999888999999999999999999999766677899999999999
Q ss_pred cCCCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCC
Q 004195 192 KNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGP 245 (769)
Q Consensus 192 ~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~ 245 (769)
++|++++..|..|.++++|+.|+|++|+|++..+. +..+++|+.|++++|.+..
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 99999999999999999999999999999988775 7888888888888887753
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.79 E-value=1e-18 Score=174.86 Aligned_cols=69 Identities=19% Similarity=0.220 Sum_probs=40.7
Q ss_pred hhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCC
Q 004195 272 ELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGY 340 (769)
Q Consensus 272 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~ 340 (769)
.|..+++|++|+|++|++++..|..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|.+++.
T Consensus 100 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 100 MFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp GGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred HhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 344455555555555555555555555666666666666666665566666666666666666666543
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1e-18 Score=174.71 Aligned_cols=151 Identities=21% Similarity=0.295 Sum_probs=78.0
Q ss_pred eeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCcc
Q 004195 140 ILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANH 219 (769)
Q Consensus 140 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~ 219 (769)
.+++++|.++ .+|..+. ++|+.|+|++|+|++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|+
T Consensus 15 ~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 4445555554 3444333 445555555555554444455555555555555555555555555555555555555555
Q ss_pred ccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCC
Q 004195 220 LSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLS 299 (769)
Q Consensus 220 l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 299 (769)
|++.. +..|..+++|++|+|++|++++..|..|..
T Consensus 92 l~~l~---------------------------------------------~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~ 126 (220)
T 2v9t_B 92 ITELP---------------------------------------------KSLFEGLFSLQLLLLNANKINCLRVDAFQD 126 (220)
T ss_dssp CCCCC---------------------------------------------TTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred CCccC---------------------------------------------HhHccCCCCCCEEECCCCCCCEeCHHHcCC
Confidence 54322 222333444444444444444444444555
Q ss_pred CCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCC
Q 004195 300 LPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLT 338 (769)
Q Consensus 300 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~ 338 (769)
+++|+.|+|++|++++..+..+..+++|+.|+|++|.+.
T Consensus 127 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 127 LHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 555555555555555555555555555555555555554
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.79 E-value=3.7e-19 Score=192.26 Aligned_cols=111 Identities=25% Similarity=0.144 Sum_probs=77.5
Q ss_pred CCcEEEeecccccCCCCcccc-CCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEec
Q 004195 113 SLKVLSLVSLGLWGPLPGSIA-HSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL 191 (769)
Q Consensus 113 ~L~~L~L~~n~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 191 (769)
.++.|+|++|++++..+..|. ++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 40 ~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 119 (361)
T 2xot_A 40 YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLL 119 (361)
T ss_dssp TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEEC
Confidence 466777777777666666665 6777777777777777666666777777777777777777666666777777777777
Q ss_pred cCCCCcccCCccccCCCCCCEEEccCcccccc
Q 004195 192 KNNSLSGFLPVSLTGLQSLRVVSLSANHLSGE 223 (769)
Q Consensus 192 ~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~ 223 (769)
++|++++..|..|.++++|+.|+|++|+|++.
T Consensus 120 ~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l 151 (361)
T 2xot_A 120 YNNHIVVVDRNAFEDMAQLQKLYLSQNQISRF 151 (361)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCSC
T ss_pred CCCcccEECHHHhCCcccCCEEECCCCcCCee
Confidence 77777766666677777777777777766653
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=7.6e-20 Score=187.77 Aligned_cols=136 Identities=10% Similarity=0.105 Sum_probs=105.1
Q ss_pred CCCcCccccCCceeEEEEEe-CCCcE--EEEEEccccCCCC------------------------hhHHHHHHHHHhhcc
Q 004195 482 FDSSSFMCDASHGQIYKGKL-TDGTL--VAIRSLKMSKKSS------------------------PHMYTYHIELISKLR 534 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~-~~g~~--vAvK~~~~~~~~~------------------------~~~~~~Ei~~l~~l~ 534 (769)
|+..+.||+|+||.||+|+. .+|+. ||||+++...... ...+.+|++++.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999997 68988 9999875431110 125788999999998
Q ss_pred CCce--eeEeeeeeccCCCCCCcceEEEEEeccCC-C----chhhhhcCCCCCCCHHHHHHHHHHHHHHhcccc-cCCCC
Q 004195 535 HSNL--VSALGHCLDFSLDDPSISIIYLIFEYAPN-E----TLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLH-TGIVP 606 (769)
Q Consensus 535 H~nI--v~l~~~~~~~~~~~~~~~~~~lV~Ey~~~-g----sL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~~ 606 (769)
|+++ ..++++. ..++||||+.+ | +|.++... .++.....++.|++.||+||| +.
T Consensus 129 ~~~i~~p~~~~~~-----------~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~~~--- 190 (258)
T 1zth_A 129 EAGVSVPQPYTYM-----------KNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQEA--- 190 (258)
T ss_dssp HTTCCCCCEEEEE-----------TTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHHTS---
T ss_pred hCCCCCCeEEEcC-----------CCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHHHC---
Confidence 8864 3444321 14899999942 4 66665432 234567789999999999999 88
Q ss_pred CccccCccccceeeCCCceeeecCCCCchhh
Q 004195 607 GVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 607 ~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
+|+||||||+|||+++ .++|+|||+|...
T Consensus 191 givHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 191 ELVHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CEECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred CEEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 9999999999999998 9999999998643
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.78 E-value=4.7e-19 Score=191.47 Aligned_cols=127 Identities=25% Similarity=0.293 Sum_probs=93.7
Q ss_pred cEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCcccc-CCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccC
Q 004195 115 KVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQIS-SLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKN 193 (769)
Q Consensus 115 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 193 (769)
+++++++|+++. +|..+. ..+++|+|++|+|++..+..|. ++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 578888888854 566554 3578888888888877676676 788888888888888877777788888888888888
Q ss_pred CCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCC
Q 004195 194 NSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFG 244 (769)
Q Consensus 194 N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~ 244 (769)
|+|++..+..|.++++|++|+|++|+|++..|. +..+++|+.|++++|.++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 149 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS 149 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC
Confidence 888877777788888888888888887765443 555555555555555443
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.78 E-value=3.2e-18 Score=172.33 Aligned_cols=102 Identities=25% Similarity=0.318 Sum_probs=66.3
Q ss_pred EEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCC
Q 004195 117 LSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSL 196 (769)
Q Consensus 117 L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 196 (769)
++.+++++ +.+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|+...+..|..+++|++|+|++|++
T Consensus 24 v~c~~~~l-~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l 100 (229)
T 3e6j_A 24 VDCRSKRH-ASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQL 100 (229)
T ss_dssp EECTTSCC-SSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred eEccCCCc-CccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcC
Confidence 34444444 34454443 6677777777777776677777777777777777777655555566777777777777777
Q ss_pred cccCCccccCCCCCCEEEccCcccc
Q 004195 197 SGFLPVSLTGLQSLRVVSLSANHLS 221 (769)
Q Consensus 197 ~~~~p~~l~~l~~L~~L~ls~N~l~ 221 (769)
++..+..|..+++|++|+|++|+|+
T Consensus 101 ~~l~~~~~~~l~~L~~L~Ls~N~l~ 125 (229)
T 3e6j_A 101 TVLPSAVFDRLVHLKELFMCCNKLT 125 (229)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CccChhHhCcchhhCeEeccCCccc
Confidence 6655555666666666666666655
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.77 E-value=8.7e-19 Score=172.19 Aligned_cols=131 Identities=21% Similarity=0.264 Sum_probs=95.3
Q ss_pred CCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCE
Q 004195 109 GSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSV 188 (769)
Q Consensus 109 ~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 188 (769)
+.+++|+.|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|+|++|++++..|..|+.+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 56777888888888886 455 5788888888888888665 3347778888888888888887777777888888888
Q ss_pred EeccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcC
Q 004195 189 LSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYF 243 (769)
Q Consensus 189 L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l 243 (769)
|+|++|.+++..|..++++++|++|++++|.+.+.+|.+..+++|+.|++++|.+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~~l~~l~~L~~L~l~~n~i 171 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMPLKTLPELKSLNIQFDGV 171 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCGGGGGCSSCCEEECTTBCC
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccHhhcCCCCCCEEECCCCCC
Confidence 8888888887777777888888888888877333444555555555555555444
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.76 E-value=7.5e-19 Score=180.86 Aligned_cols=170 Identities=21% Similarity=0.292 Sum_probs=97.4
Q ss_pred CCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEE
Q 004195 135 SSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVS 214 (769)
Q Consensus 135 l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 214 (769)
+.++..+++++|.+++ ++ .+..+++|++|+|++|.++ .+| .+..+++|++|+|++|++++..| +.++++|+.|+
T Consensus 18 l~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 4445555555555553 22 4555556666666666555 333 45555666666666666654333 55666666666
Q ss_pred ccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCC
Q 004195 215 LSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFI 294 (769)
Q Consensus 215 ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~ 294 (769)
|++|++++ +|.+.. ++|+.|++++|.++ + + +.+..+++|+.|+|++|++++.
T Consensus 92 L~~N~l~~-l~~~~~-~~L~~L~L~~N~l~---------------------~-~--~~l~~l~~L~~L~Ls~N~i~~~-- 143 (263)
T 1xeu_A 92 VNRNRLKN-LNGIPS-ACLSRLFLDNNELR---------------------D-T--DSLIHLKNLEILSIRNNKLKSI-- 143 (263)
T ss_dssp CCSSCCSC-CTTCCC-SSCCEEECCSSCCS---------------------B-S--GGGTTCTTCCEEECTTSCCCBC--
T ss_pred CCCCccCC-cCcccc-CcccEEEccCCccC---------------------C-C--hhhcCcccccEEECCCCcCCCC--
Confidence 66666654 222222 44444444444332 1 1 2355666677777777776653
Q ss_pred ccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCC
Q 004195 295 PSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGY 340 (769)
Q Consensus 295 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~ 340 (769)
+.+..+++|+.|+|++|++++. ..+..+++|+.|++++|.+++.
T Consensus 144 ~~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 144 VMLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp GGGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred hHHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 3566667777777777777665 5566677777777777777654
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.75 E-value=7.9e-19 Score=180.70 Aligned_cols=172 Identities=23% Similarity=0.292 Sum_probs=136.1
Q ss_pred CCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEE
Q 004195 110 SLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVL 189 (769)
Q Consensus 110 ~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 189 (769)
.+.++..+++++|.+++.. .+..+++|++|++++|.++ .+| .+..+++|++|+|++|++++..| +..+++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 4666777888888886543 5788889999999999988 466 78889999999999999886444 8889999999
Q ss_pred eccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcC
Q 004195 190 SLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLN 269 (769)
Q Consensus 190 ~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~ 269 (769)
+|++|++++. |.. .. ++|+.|+|++|++++ ++.+..+++|+.|++++|.+++ +
T Consensus 91 ~L~~N~l~~l-~~~-~~-~~L~~L~L~~N~l~~-~~~l~~l~~L~~L~Ls~N~i~~----------------------~- 143 (263)
T 1xeu_A 91 SVNRNRLKNL-NGI-PS-ACLSRLFLDNNELRD-TDSLIHLKNLEILSIRNNKLKS----------------------I- 143 (263)
T ss_dssp ECCSSCCSCC-TTC-CC-SSCCEEECCSSCCSB-SGGGTTCTTCCEEECTTSCCCB----------------------C-
T ss_pred ECCCCccCCc-Ccc-cc-CcccEEEccCCccCC-ChhhcCcccccEEECCCCcCCC----------------------C-
Confidence 9999998863 432 23 889999999999886 4567788888877777776642 2
Q ss_pred chhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccc
Q 004195 270 PDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLL 317 (769)
Q Consensus 270 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 317 (769)
+ .+..+++|+.|+|++|++++. ..+..+++|+.|++++|.+++..
T Consensus 144 ~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 144 V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECCC
T ss_pred h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCCc
Confidence 2 567788899999999988875 67888899999999999887753
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.75 E-value=2.1e-19 Score=211.27 Aligned_cols=219 Identities=21% Similarity=0.182 Sum_probs=104.7
Q ss_pred CCCcEEEeecccccCCCCccccCCCcCc-----eeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCC
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLE-----ILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVL 186 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~-----~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 186 (769)
+.++.|+|.+|.+... |..+.....|. .++++.|++. ..|..|..+++|+.|+|++|.+. .+|..+.++++|
T Consensus 173 ~~~~~l~L~~n~~~~~-~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L 249 (727)
T 4b8c_D 173 PLTPKIELFANGKDEA-NQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFL 249 (727)
T ss_dssp ---------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSC
T ss_pred CccceEEeeCCCCCcc-hhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCC
Confidence 5577888888887653 43332222222 2333444444 55788999999999999999998 788888899999
Q ss_pred CEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccC
Q 004195 187 SVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQF 266 (769)
Q Consensus 187 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~ 266 (769)
++|+|++|.|+ .+|..|++|++|++|+|++|+|+..+..++.|++|++|+|++|.|+
T Consensus 250 ~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~---------------------- 306 (727)
T 4b8c_D 250 TRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNMVT---------------------- 306 (727)
T ss_dssp SCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGTTCSEEECCSSCCC----------------------
T ss_pred CEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCccChhhcCCCCCCEEECCCCCCC----------------------
Confidence 99999999999 7899999999999999999999954445888888888888888775
Q ss_pred CcCchhhcCCCcCcEEeccCccccccCCccCCCCCC-CCEEEccCCcCCccccccCCCCCCCcEEEccCC--------cC
Q 004195 267 GLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPS-ITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSN--------LL 337 (769)
Q Consensus 267 ~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~-L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N--------~l 337 (769)
.+ |..|..+++|++|+|++|.|++.+|..+..+.. +..|+|++|.+++.+|.. |..|+++.| .|
T Consensus 307 ~l-p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~l 379 (727)
T 4b8c_D 307 TL-PWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDSL 379 (727)
T ss_dssp CC-CSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-------------------------
T ss_pred cc-ChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecccccccccCCc
Confidence 23 444555666666666666666655555433221 123556666666655543 334444444 33
Q ss_pred CCCCCccccccCCCceEECCCCCCCh
Q 004195 338 TGYLPSCLQVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 338 ~g~~p~~~~~~~~l~~l~l~~N~l~~ 363 (769)
.+..+..+..+..+....++.|.+.+
T Consensus 380 ~~~~~~~~~~l~~~~~~~ls~Nil~~ 405 (727)
T 4b8c_D 380 QQSTEHLATDLAKRTFTVLSYNTLCQ 405 (727)
T ss_dssp ----------------------CCCG
T ss_pred cccccchhhcccccceeeeecccccc
Confidence 33333333444455556667776654
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.74 E-value=8.5e-18 Score=165.08 Aligned_cols=106 Identities=21% Similarity=0.266 Sum_probs=67.5
Q ss_pred ccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCC
Q 004195 132 IAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLR 211 (769)
Q Consensus 132 ~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 211 (769)
.+.+++|++|++++|.++ .+| .+..+++|++|+|++|.++ .+..+..+++|++|+|++|.+++..|..++++++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 356677777777777777 455 5777777777777777554 234667777777777777777766666677777777
Q ss_pred EEEccCccccccCCC-CCCCccCcEEeccCC
Q 004195 212 VVSLSANHLSGEIPD-LRNLKNLRVFDVQDN 241 (769)
Q Consensus 212 ~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N 241 (769)
+|++++|++++..+. +..+++|+.|++++|
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n 146 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYN 146 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSC
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCC
Confidence 777777766653222 334444443333333
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.72 E-value=6.6e-18 Score=165.04 Aligned_cols=113 Identities=25% Similarity=0.244 Sum_probs=91.8
Q ss_pred CCcEEEeecccccCCCCc-cccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEec
Q 004195 113 SLKVLSLVSLGLWGPLPG-SIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL 191 (769)
Q Consensus 113 ~L~~L~L~~n~l~g~~p~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 191 (769)
+|+.|+|++|++++..+. .|+++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 778888888888776654 4788888888888888888877888888888888888888888777777888888888888
Q ss_pred cCCCCcccCCccccCCCCCCEEEccCccccccCC
Q 004195 192 KNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIP 225 (769)
Q Consensus 192 ~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p 225 (769)
++|++++.+|..|..+++|++|+|++|.+++..+
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 8888888888888888888888888888876543
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=3.2e-20 Score=211.63 Aligned_cols=189 Identities=23% Similarity=0.188 Sum_probs=162.4
Q ss_pred cCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCC-------------CcccCCccccCCCCCCEEE-ccCccccc
Q 004195 157 SSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNS-------------LSGFLPVSLTGLQSLRVVS-LSANHLSG 222 (769)
Q Consensus 157 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-------------l~~~~p~~l~~l~~L~~L~-ls~N~l~~ 222 (769)
..+++|+.|+|++|+++ .+|.++++|++|+.|++++|. +.+.+|..++++++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 67899999999999997 889999999999999998875 6677788888888888888 6776542
Q ss_pred cCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCC
Q 004195 223 EIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPS 302 (769)
Q Consensus 223 ~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 302 (769)
+|..+.+++|.++...+ ..|+.|+|++|.+++ + |. +..+++|+.|+|++|+|+ .+|..++++++
T Consensus 424 ---------~L~~l~l~~n~i~~l~~---~~L~~L~Ls~n~l~~-l-p~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~ 487 (567)
T 1dce_A 424 ---------DLRSKFLLENSVLKMEY---ADVRVLHLAHKDLTV-L-CH-LEQLLLVTHLDLSHNRLR-ALPPALAALRC 487 (567)
T ss_dssp ---------HHHHHHHHHHHHHHHHH---TTCSEEECTTSCCSS-C-CC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTT
T ss_pred ---------hhhhhhhhcccccccCc---cCceEEEecCCCCCC-C-cC-ccccccCcEeecCccccc-ccchhhhcCCC
Confidence 45555666666543222 247889999999985 5 65 999999999999999999 68999999999
Q ss_pred CCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCC-CccccccCCCceEECCCCCCChhh
Q 004195 303 ITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYL-PSCLQVEAKTRLVLYSKNCLSNEE 365 (769)
Q Consensus 303 L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~-p~~~~~~~~l~~l~l~~N~l~~~~ 365 (769)
|+.|+|++|+|++ +| .++.+++|+.|+|++|+|++.+ |..+..+++|+.+++++|.+++.+
T Consensus 488 L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 549 (567)
T 1dce_A 488 LEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEE 549 (567)
T ss_dssp CCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSS
T ss_pred CCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCc
Confidence 9999999999998 56 8999999999999999999988 999999999999999999997753
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.71 E-value=4.4e-17 Score=159.19 Aligned_cols=131 Identities=23% Similarity=0.312 Sum_probs=115.5
Q ss_pred cEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCc-cccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccC
Q 004195 115 KVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPV-QISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKN 193 (769)
Q Consensus 115 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 193 (769)
+.+++++|++ +.+|..+.. +|++|+|++|+|++..+. .|+.+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l-~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGL-KEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCC-SSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCc-CcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 5678888888 567776654 899999999999976664 489999999999999999999999999999999999999
Q ss_pred CCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCCCc
Q 004195 194 NSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFP 248 (769)
Q Consensus 194 N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p 248 (769)
|++++..|..|.++++|++|+|++|+|++.+|. +..+++|+.|++++|.+.+..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 999999999999999999999999999998775 7888999999998888876544
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.70 E-value=3.4e-17 Score=156.32 Aligned_cols=133 Identities=23% Similarity=0.221 Sum_probs=118.8
Q ss_pred CCCCCcEEEeeccccc-CCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCE
Q 004195 110 SLSSLKVLSLVSLGLW-GPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSV 188 (769)
Q Consensus 110 ~l~~L~~L~L~~n~l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 188 (769)
..++|+.|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..|..+++|++|+|++|++++.+|..+.++++|++
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 3478999999999998 78899899999999999999999965 78999999999999999999888888888999999
Q ss_pred EeccCCCCcccC-CccccCCCCCCEEEccCccccccCC----CCCCCccCcEEeccCCcCC
Q 004195 189 LSLKNNSLSGFL-PVSLTGLQSLRVVSLSANHLSGEIP----DLRNLKNLRVFDVQDNYFG 244 (769)
Q Consensus 189 L~L~~N~l~~~~-p~~l~~l~~L~~L~ls~N~l~~~~p----~l~~l~~L~~l~l~~N~l~ 244 (769)
|+|++|.+++.. +..+.++++|+.|++++|.+++..+ .+..+++|+.|++++|.+.
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 999999998643 2789999999999999999998777 5888999999999998775
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.2e-18 Score=201.61 Aligned_cols=255 Identities=13% Similarity=0.069 Sum_probs=129.5
Q ss_pred cccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccC---CcCCccccCCCcCCEEEcccCcCCccCCccC
Q 004195 104 FFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLS---GSIPVQISSLRNLQTLILDDNKFTGAVPSEL 180 (769)
Q Consensus 104 ~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~---g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 180 (769)
++..+.++++|+.|+|++|.+.+ +|..+.++++|++|+++.+... +..+..+..+++|+.|+++++. .+.+|..+
T Consensus 212 l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~-~~~l~~~~ 289 (592)
T 3ogk_B 212 LETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMG-PNEMPILF 289 (592)
T ss_dssp HHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCC-TTTGGGGG
T ss_pred HHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccc-hhHHHHHH
Confidence 34455678889999998888765 5677777788888877753322 2333455556666666666543 23455556
Q ss_pred cCCcCCCEEeccCCCCcccCC-ccccCCCCCCEEEccCcccc-ccCCC-CCCCccCcEEecc------------------
Q 004195 181 SLLQVLSVLSLKNNSLSGFLP-VSLTGLQSLRVVSLSANHLS-GEIPD-LRNLKNLRVFDVQ------------------ 239 (769)
Q Consensus 181 ~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~ls~N~l~-~~~p~-l~~l~~L~~l~l~------------------ 239 (769)
..+++|++|+|++|.+++... ..+.++++|+.|+++ |.+. +.++. ...+++|+.|+++
T Consensus 290 ~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~ 368 (592)
T 3ogk_B 290 PFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQR 368 (592)
T ss_dssp GGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHH
T ss_pred hhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHH
Confidence 666666666666666543322 224555556666555 2222 11221 1234445555554
Q ss_pred ------------------CCcCCCCCcc----cccCCcEEEeC----CccccCC-----cCchhhcCCCcCcEEeccCc-
Q 004195 240 ------------------DNYFGPRFPR----LHKKMVTLVLR----NNRFQFG-----LNPDELRSYNQLQKLDISLN- 287 (769)
Q Consensus 240 ------------------~N~l~~~~p~----~~~~L~~L~l~----~N~~~~~-----i~p~~~~~l~~L~~L~Ls~N- 287 (769)
.|.+++..+. ..++|+.|+++ .|.+++. + +..+..+++|++|+|+++
T Consensus 369 ~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~-~~~~~~~~~L~~L~L~~~~ 447 (592)
T 3ogk_B 369 GLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGV-RSLLIGCKKLRRFAFYLRQ 447 (592)
T ss_dssp HHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHH-HHHHHHCTTCCEEEEECCG
T ss_pred HHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHH-HHHHHhCCCCCEEEEecCC
Confidence 4444332221 12345555553 3444431 1 122344555555555422
Q ss_pred -cccccCCccCC-CCCCCCEEEccCCcCCc-cccccCCCCCCCcEEEccCCcCCCC-CCccccccCCCceEECCCCCCC
Q 004195 288 -RFVGPFIPSLL-SLPSITYLDIHGNKLTG-LLLQNMSCNPQLAFVDLSSNLLTGY-LPSCLQVEAKTRLVLYSKNCLS 362 (769)
Q Consensus 288 -~l~~~~~~~~~-~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~l~l~~N~l~g~-~p~~~~~~~~l~~l~l~~N~l~ 362 (769)
.+++..+..+. .+++|+.|+|++|++++ .++..+..+++|+.|+|++|.+++. ++.....+++++.+++++|.++
T Consensus 448 ~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it 526 (592)
T 3ogk_B 448 GGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRAS 526 (592)
T ss_dssp GGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCC
T ss_pred CCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCC
Confidence 23333232222 24556666666665554 2233344555566666666655432 2233334555566666655544
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.68 E-value=3e-17 Score=153.33 Aligned_cols=128 Identities=23% Similarity=0.246 Sum_probs=113.6
Q ss_pred CCCCcEEEeeccccc-CCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEE
Q 004195 111 LSSLKVLSLVSLGLW-GPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVL 189 (769)
Q Consensus 111 l~~L~~L~L~~n~l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 189 (769)
.++|+.|++++|.++ +.+|..+..+++|++|+|++|.+++. ..++++++|++|+|++|++++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 478999999999998 78999999999999999999999875 789999999999999999998888888889999999
Q ss_pred eccCCCCccc-CCccccCCCCCCEEEccCccccccCC----CCCCCccCcEEeccC
Q 004195 190 SLKNNSLSGF-LPVSLTGLQSLRVVSLSANHLSGEIP----DLRNLKNLRVFDVQD 240 (769)
Q Consensus 190 ~L~~N~l~~~-~p~~l~~l~~L~~L~ls~N~l~~~~p----~l~~l~~L~~l~l~~ 240 (769)
+|++|.+++. .+..++++++|++|++++|.+++..+ .+..+++|+.|++++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 9999999874 45789999999999999999998766 377888999888764
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.66 E-value=6.1e-17 Score=172.35 Aligned_cols=134 Identities=10% Similarity=0.137 Sum_probs=98.2
Q ss_pred CCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCC--------------CChhHH--------HHHHHHHhhccCCce
Q 004195 481 CFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKK--------------SSPHMY--------TYHIELISKLRHSNL 538 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~--------------~~~~~~--------~~Ei~~l~~l~H~nI 538 (769)
-|++.+.||+|++|.||+|...+|+.||||+++.... ...... .+|...|.++.+.++
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3888999999999999999998999999998764210 011122 245555555544433
Q ss_pred e--eEeeeeeccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCcccc
Q 004195 539 V--SALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKIT 616 (769)
Q Consensus 539 v--~l~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~ 616 (769)
. ..+++. ..+|||||+++++|.++.... ....++.|++.+|.|||+. +||||||||.
T Consensus 176 ~vp~p~~~~-----------~~~LVME~i~G~~L~~l~~~~-------~~~~l~~qll~~l~~lH~~---gIVHrDLKp~ 234 (397)
T 4gyi_A 176 PVPEPIAQS-----------RHTIVMSLVDALPMRQVSSVP-------DPASLYADLIALILRLAKH---GLIHGDFNEF 234 (397)
T ss_dssp SCCCEEEEE-----------TTEEEEECCSCEEGGGCCCCS-------CHHHHHHHHHHHHHHHHHT---TEECSCCSTT
T ss_pred CCCeeeecc-----------CceEEEEecCCccHhhhcccH-------HHHHHHHHHHHHHHHHHHC---CCcCCCCCHH
Confidence 2 222211 027999999999988765421 2346789999999999998 9999999999
Q ss_pred ceeeCCCc----------eeeecCCCCch
Q 004195 617 DVLLDENF----------HVKINSYNLPL 635 (769)
Q Consensus 617 NILld~~~----------~~kl~DFGla~ 635 (769)
|||+++++ .+.|+||+-+.
T Consensus 235 NILl~~dgd~~d~~~~~~~~~iID~~Q~V 263 (397)
T 4gyi_A 235 NILIREEKDAEDPSSITLTPIIIXFPQMV 263 (397)
T ss_dssp SEEEEEEECSSCTTSEEEEEEECCCTTCE
T ss_pred HEEEeCCCCcccccccccceEEEEeCCcc
Confidence 99998776 48999999764
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=99.65 E-value=4.8e-18 Score=196.37 Aligned_cols=243 Identities=10% Similarity=-0.001 Sum_probs=123.3
Q ss_pred CCcEEEeeccc-cc-CCCCccccCCCcCceeeccCcccCCc----CCccccCCCcCCEEEcccCcCC----ccCCccCcC
Q 004195 113 SLKVLSLVSLG-LW-GPLPGSIAHSSSLEILNLSSNYLSGS----IPVQISSLRNLQTLILDDNKFT----GAVPSELSL 182 (769)
Q Consensus 113 ~L~~L~L~~n~-l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~L~~N~l~----~~~p~~~~~ 182 (769)
+|++|+|++|. ++ ..++..+.++++|++|+|++|.+++. ++..+.++++|++|+|++|.++ +.++..+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 37777776665 11 11222334666777777777776554 3334456667777777777765 233444556
Q ss_pred CcCCCEEeccCCCCcccCCccccCCCCCCEEEccCcccc----ccCCCCCCCccCcEEeccCCcCCCCCccc---ccCCc
Q 004195 183 LQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLS----GEIPDLRNLKNLRVFDVQDNYFGPRFPRL---HKKMV 255 (769)
Q Consensus 183 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~----~~~p~l~~l~~L~~l~l~~N~l~~~~p~~---~~~L~ 255 (769)
+++|+.|+|++|.+.+ +|..+.++++|+.|+++.+... .....+..+++|+.++++++. .+.+|.. .++|+
T Consensus 219 ~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~-~~~l~~~~~~~~~L~ 296 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMG-PNEMPILFPFAAQIR 296 (592)
T ss_dssp CTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCC-TTTGGGGGGGGGGCC
T ss_pred CCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccc-hhHHHHHHhhcCCCc
Confidence 6777777777776664 5566666677777766642221 011124555556666655532 2223322 34556
Q ss_pred EEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEcc-----------CCcCCccc-cccCCC
Q 004195 256 TLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIH-----------GNKLTGLL-LQNMSC 323 (769)
Q Consensus 256 ~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~-----------~N~l~~~~-~~~~~~ 323 (769)
+|+|++|.++....+..+..+++|++|+++++...+.++..+..+++|+.|+++ .|.+++.. +.....
T Consensus 297 ~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~ 376 (592)
T 3ogk_B 297 KLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQG 376 (592)
T ss_dssp EEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHH
T ss_pred EEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhh
Confidence 666666654432211224555566666655222222222222345555555555 24444321 111223
Q ss_pred CCCCcEEEccCCcCCCCCCccccc-cCCCceEECC
Q 004195 324 NPQLAFVDLSSNLLTGYLPSCLQV-EAKTRLVLYS 357 (769)
Q Consensus 324 l~~L~~l~l~~N~l~g~~p~~~~~-~~~l~~l~l~ 357 (769)
+++|+.|+++.|.+++..+..+.. +++++.++++
T Consensus 377 ~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~ 411 (592)
T 3ogk_B 377 CQELEYMAVYVSDITNESLESIGTYLKNLCDFRLV 411 (592)
T ss_dssp CTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEE
T ss_pred CccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEe
Confidence 455555555555555544444333 4455555553
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.65 E-value=3.8e-16 Score=150.39 Aligned_cols=114 Identities=26% Similarity=0.232 Sum_probs=84.7
Q ss_pred CCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEec
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL 191 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 191 (769)
++|+.|+|++|++++..+..|+++++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..|..+++|++|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 107 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELAL 107 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEEC
Confidence 56778888888877666666777888888888888887665666777788888888888877666666777777777777
Q ss_pred cCCCCcccCCccccCCCCCCEEEccCccccccCC
Q 004195 192 KNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIP 225 (769)
Q Consensus 192 ~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p 225 (769)
++|.+++..+..+.++++|+.|+|++|.+++..|
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 108 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 7777776555556777777777777777776544
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.64 E-value=9.8e-16 Score=149.60 Aligned_cols=108 Identities=26% Similarity=0.319 Sum_probs=64.5
Q ss_pred CCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEecc
Q 004195 113 SLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLK 192 (769)
Q Consensus 113 ~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 192 (769)
+|+.|+|++|+++ .+|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|+
T Consensus 32 ~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 110 (193)
T 2wfh_A 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLH 110 (193)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECC
Confidence 5566666666664 455566666666666666666665555556666666666666666665555556666666666666
Q ss_pred CCCCcccCCccccCCCCCCEEEccCcccc
Q 004195 193 NNSLSGFLPVSLTGLQSLRVVSLSANHLS 221 (769)
Q Consensus 193 ~N~l~~~~p~~l~~l~~L~~L~ls~N~l~ 221 (769)
+|.+++..+..|.++++|+.|+|++|.+.
T Consensus 111 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 111 GNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 66666544445555566666666555554
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.64 E-value=4.4e-16 Score=148.52 Aligned_cols=107 Identities=25% Similarity=0.264 Sum_probs=80.5
Q ss_pred CCcCceeeccCcccC-CcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEE
Q 004195 135 SSSLEILNLSSNYLS-GSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVV 213 (769)
Q Consensus 135 l~~L~~L~Ls~N~l~-g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 213 (769)
.++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..|..+++|++|+|++|.+++.+|..+.++++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 367888888888887 77888888888888888888888865 778888888888888888887777777778888888
Q ss_pred EccCccccccC--CCCCCCccCcEEeccCCcC
Q 004195 214 SLSANHLSGEI--PDLRNLKNLRVFDVQDNYF 243 (769)
Q Consensus 214 ~ls~N~l~~~~--p~l~~l~~L~~l~l~~N~l 243 (769)
+|++|++++.. +.+..+++|+.|++++|.+
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l 132 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEV 132 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGG
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcC
Confidence 88888877632 3344444444444444433
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.5e-15 Score=146.15 Aligned_cols=132 Identities=24% Similarity=0.259 Sum_probs=113.0
Q ss_pred CcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccC
Q 004195 114 LKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKN 193 (769)
Q Consensus 114 L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 193 (769)
.+.+++++|+++. +|..+ .++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++
T Consensus 9 ~~~l~~~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 3567777788754 55444 36899999999999987777789999999999999999977777889999999999999
Q ss_pred CCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCCCc
Q 004195 194 NSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFP 248 (769)
Q Consensus 194 N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p 248 (769)
|.+++..+..|.++++|++|++++|++++.++. +..+++|+.|++++|.+.+..|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 999988888889999999999999999977666 5788999999999998887655
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.63 E-value=2.7e-15 Score=146.51 Aligned_cols=128 Identities=26% Similarity=0.345 Sum_probs=114.1
Q ss_pred cEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCC
Q 004195 115 KVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNN 194 (769)
Q Consensus 115 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 194 (769)
+++++++|+++ .+|..+. ++|++|+|++|+|+ .+|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 35667777774 4666553 58999999999998 78899999999999999999999888899999999999999999
Q ss_pred CCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCC
Q 004195 195 SLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPR 246 (769)
Q Consensus 195 ~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~ 246 (769)
++++..|..|.++++|++|+|++|+|++..+. +..+++|+.|++++|.+...
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 99999899999999999999999999987775 88999999999999998753
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.61 E-value=6.2e-16 Score=144.28 Aligned_cols=131 Identities=23% Similarity=0.220 Sum_probs=107.2
Q ss_pred CCcCceeeccCcccC-CcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEE
Q 004195 135 SSSLEILNLSSNYLS-GSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVV 213 (769)
Q Consensus 135 l~~L~~L~Ls~N~l~-g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 213 (769)
.++|+.|++++|.++ +.+|..+..+++|++|+|++|.+++. ..++.+++|++|+|++|.+++.+|..+.++++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 478999999999998 78999999999999999999999866 789999999999999999998888888889999999
Q ss_pred EccCccccccC--CCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccC
Q 004195 214 SLSANHLSGEI--PDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISL 286 (769)
Q Consensus 214 ~ls~N~l~~~~--p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~ 286 (769)
++++|++++.. +.+..+++|+.|++++|.+++..+ .....+..+++|++||+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~-------------------~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLND-------------------YRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTT-------------------HHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHH-------------------HHHHHHHHCCCcccccCCC
Confidence 99999998743 557777777777777776642211 0014677888888888764
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.59 E-value=2.4e-15 Score=160.12 Aligned_cols=235 Identities=12% Similarity=0.161 Sum_probs=149.4
Q ss_pred CCCCcEEEeeccccc--CCCCccccCCCcCceeeccCcccCCcCCccccC--------CCcCCEEEcccCcCCccCCccC
Q 004195 111 LSSLKVLSLVSLGLW--GPLPGSIAHSSSLEILNLSSNYLSGSIPVQISS--------LRNLQTLILDDNKFTGAVPSEL 180 (769)
Q Consensus 111 l~~L~~L~L~~n~l~--g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~--------l~~L~~L~L~~N~l~~~~p~~~ 180 (769)
+++|+.|||++|++. ...+..+ +.++.+++..|.| .+..|.+ |++|+.|+|.+ .++..-+.+|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~I---~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF 120 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANFV---PAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAF 120 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTEE---CTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTT
T ss_pred hccCeEEecCcceeEEecCccccc---ccccccccccccc---CHHHhcccccccccccCCCcEEECCc-cccchhHHHh
Confidence 678888888888886 2222222 2245555555533 2345556 88888888888 7776667778
Q ss_pred cCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccc---cCC--CCCCCccCc---------------------
Q 004195 181 SLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSG---EIP--DLRNLKNLR--------------------- 234 (769)
Q Consensus 181 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~---~~p--~l~~l~~L~--------------------- 234 (769)
.++++|+.|+|++|.++...+.+|.++.++..+.+..+.... .+. .+..+..|+
T Consensus 121 ~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~ 200 (329)
T 3sb4_A 121 KGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQ 200 (329)
T ss_dssp TTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCC
T ss_pred hcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccC
Confidence 888888888888888877777788887777777665532210 011 122223333
Q ss_pred -----EEeccCCcCCCC---CcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCC-E
Q 004195 235 -----VFDVQDNYFGPR---FPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSIT-Y 305 (769)
Q Consensus 235 -----~l~l~~N~l~~~---~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~-~ 305 (769)
.+.+.++-.... +.....+|+.++|++|+++ .|++..|..+++|+.|+|.+| +.......|.++++|+ .
T Consensus 201 ~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~-~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~ 278 (329)
T 3sb4_A 201 PRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNAT-TIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGT 278 (329)
T ss_dssp GGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEE
T ss_pred ccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcc-eecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEE
Confidence 333322211000 0011456777777777776 455667777777888877776 6555556677777777 7
Q ss_pred EEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEE
Q 004195 306 LDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVL 355 (769)
Q Consensus 306 L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~ 355 (769)
+++.+ +++...+..|..+++|+.+++++|+++...+..|..+++|+.++
T Consensus 279 l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 279 LELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 77777 66666667777777788777777777766666777777776654
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.58 E-value=1.7e-15 Score=145.62 Aligned_cols=133 Identities=21% Similarity=0.231 Sum_probs=109.6
Q ss_pred ccCCCCCCcEEEeecccccCCCCccccCCC-cCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcC
Q 004195 107 TLGSLSSLKVLSLVSLGLWGPLPGSIAHSS-SLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQV 185 (769)
Q Consensus 107 ~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 185 (769)
.+.++++|+.|+|++|+++. +|. +..+. +|++|+|++|.|++. ..|+.+++|++|+|++|++++..|..|..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 46678899999999999975 465 55555 999999999999965 68899999999999999999665566689999
Q ss_pred CCEEeccCCCCcccCCc--cccCCCCCCEEEccCccccccCCC----CCCCccCcEEeccCCcCC
Q 004195 186 LSVLSLKNNSLSGFLPV--SLTGLQSLRVVSLSANHLSGEIPD----LRNLKNLRVFDVQDNYFG 244 (769)
Q Consensus 186 L~~L~L~~N~l~~~~p~--~l~~l~~L~~L~ls~N~l~~~~p~----l~~l~~L~~l~l~~N~l~ 244 (769)
|++|+|++|.++ .+|. .+.++++|+.|++++|.++...+. +..+++|+.||++.|...
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 999999999996 4565 788999999999999999854443 778888888888888653
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.56 E-value=2.6e-17 Score=161.71 Aligned_cols=108 Identities=23% Similarity=0.334 Sum_probs=59.6
Q ss_pred CCCCCCcEEEeecccccCCCCc------cccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcC
Q 004195 109 GSLSSLKVLSLVSLGLWGPLPG------SIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSL 182 (769)
Q Consensus 109 ~~l~~L~~L~L~~n~l~g~~p~------~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 182 (769)
.....++.++++.+.++|.+|. .|+++++|++|+|++|.+++ +| .+.++++|++|+|++|+++ .+|..+..
T Consensus 15 ~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~ 91 (198)
T 1ds9_A 15 EERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAV 91 (198)
T ss_dssp HHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHH
T ss_pred HhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhc
Confidence 3445556666666666665554 55556666666666666554 44 5555555666666665555 44555555
Q ss_pred CcCCCEEeccCCCCcccCCccccCCCCCCEEEccCcccc
Q 004195 183 LQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLS 221 (769)
Q Consensus 183 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~ 221 (769)
+++|++|+|++|++++ +| .+.++++|++|++++|+++
T Consensus 92 ~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~ 128 (198)
T 1ds9_A 92 ADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKIT 128 (198)
T ss_dssp HHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECC
T ss_pred CCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCC
Confidence 5555555555555554 22 3444555555555555544
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.54 E-value=2.3e-14 Score=136.81 Aligned_cols=108 Identities=24% Similarity=0.272 Sum_probs=75.4
Q ss_pred cEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCC
Q 004195 115 KVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNN 194 (769)
Q Consensus 115 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 194 (769)
+.|++++|+++. +|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 456666666643 555443 66777777777777766777777777777777777777666666777777777777777
Q ss_pred CCcccCCccccCCCCCCEEEccCccccccCC
Q 004195 195 SLSGFLPVSLTGLQSLRVVSLSANHLSGEIP 225 (769)
Q Consensus 195 ~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p 225 (769)
+|++..+..|.++++|++|+|++|.++...+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 7776666667777777777777777765443
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.53 E-value=9.2e-15 Score=140.50 Aligned_cols=109 Identities=19% Similarity=0.176 Sum_probs=71.9
Q ss_pred cccCCCcCceeeccCcccCCcCCccccCCC-cCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCC
Q 004195 131 SIAHSSSLEILNLSSNYLSGSIPVQISSLR-NLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQS 209 (769)
Q Consensus 131 ~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 209 (769)
.+.++.+|++|+|++|+++. +|. +..+. +|++|+|++|.+++. ..|..+++|++|+|++|.+++..|..+.++++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 46677788888888888874 454 44444 788888888888754 56777788888888888877655555577777
Q ss_pred CCEEEccCccccccCC--CCCCCccCcEEeccCCcC
Q 004195 210 LRVVSLSANHLSGEIP--DLRNLKNLRVFDVQDNYF 243 (769)
Q Consensus 210 L~~L~ls~N~l~~~~p--~l~~l~~L~~l~l~~N~l 243 (769)
|++|++++|+++...+ .+..+++|+.|++++|.+
T Consensus 90 L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i 125 (176)
T 1a9n_A 90 LTELILTNNSLVELGDLDPLASLKSLTYLCILRNPV 125 (176)
T ss_dssp CCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGG
T ss_pred CCEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCC
Confidence 7777777777753222 244444444444444433
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.53 E-value=1.7e-14 Score=138.19 Aligned_cols=108 Identities=25% Similarity=0.314 Sum_probs=74.8
Q ss_pred cEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCC
Q 004195 115 KVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNN 194 (769)
Q Consensus 115 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 194 (769)
+.+++++|++ +.+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l-~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRL-ASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCC-SSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCC-CccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 3456666666 34565553 66777777777777766777777777777777777777655555677777777777777
Q ss_pred CCcccCCccccCCCCCCEEEccCccccccCC
Q 004195 195 SLSGFLPVSLTGLQSLRVVSLSANHLSGEIP 225 (769)
Q Consensus 195 ~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p 225 (769)
+|++..+..|.++++|++|+|++|.+....+
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 7776555567777777777777777765443
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.51 E-value=1.3e-16 Score=156.65 Aligned_cols=106 Identities=25% Similarity=0.327 Sum_probs=65.4
Q ss_pred ccCCCcCceeeccCcccCCcCCc------cccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCcccc
Q 004195 132 IAHSSSLEILNLSSNYLSGSIPV------QISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLT 205 (769)
Q Consensus 132 ~~~l~~L~~L~Ls~N~l~g~~p~------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 205 (769)
+.....++.++++.|.++|.+|. .|+.+++|++|+|++|++++ +| .+..+++|++|+|++|.++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 45566777778888888777765 66667777777777777664 55 6666666666666666666 4555555
Q ss_pred CCCCCCEEEccCccccccCCCCCCCccCcEEeccCC
Q 004195 206 GLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDN 241 (769)
Q Consensus 206 ~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N 241 (769)
.+++|++|++++|++++ +|.+..+++|+.|++++|
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~~~~~l~~L~~L~l~~N 125 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LSGIEKLVNLRVLYMSNN 125 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HHHHHHHHHSSEEEESEE
T ss_pred cCCcCCEEECcCCcCCc-CCccccCCCCCEEECCCC
Confidence 55666666666666654 223333333433333333
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=99.51 E-value=2e-16 Score=182.82 Aligned_cols=246 Identities=18% Similarity=0.097 Sum_probs=119.5
Q ss_pred CCCCCcEEEeecccccCCCCcccc-CCCcCceeeccCc-ccCCc-CCccccCCCcCCEEEcccCcCCccCCccC----cC
Q 004195 110 SLSSLKVLSLVSLGLWGPLPGSIA-HSSSLEILNLSSN-YLSGS-IPVQISSLRNLQTLILDDNKFTGAVPSEL----SL 182 (769)
Q Consensus 110 ~l~~L~~L~L~~n~l~g~~p~~~~-~l~~L~~L~Ls~N-~l~g~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~----~~ 182 (769)
.+++|+.|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+ ..
T Consensus 103 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~ 182 (594)
T 2p1m_B 103 SYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDT 182 (594)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTT
T ss_pred hCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhc
Confidence 455666666666665554444443 4566666666666 33321 33333456666666666666554333322 24
Q ss_pred CcCCCEEeccCCC--Cccc-CCccccCCCCCCEEEccCc-cccccCCC-CCCCccCcEEeccCCc---------------
Q 004195 183 LQVLSVLSLKNNS--LSGF-LPVSLTGLQSLRVVSLSAN-HLSGEIPD-LRNLKNLRVFDVQDNY--------------- 242 (769)
Q Consensus 183 l~~L~~L~L~~N~--l~~~-~p~~l~~l~~L~~L~ls~N-~l~~~~p~-l~~l~~L~~l~l~~N~--------------- 242 (769)
+++|+.|+|++|. ++.. ++..+.++++|+.|++++| .+.+ ++. +..+++|+.|+++.+.
T Consensus 183 ~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l 261 (594)
T 2p1m_B 183 YTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVAL 261 (594)
T ss_dssp CCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHH
T ss_pred CCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHHHHHH
Confidence 4566666666654 1110 1111233466666666655 2222 221 3334444444433221
Q ss_pred ---------------CCCCCccc---ccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCcccccc-CCccCCCCCCC
Q 004195 243 ---------------FGPRFPRL---HKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGP-FIPSLLSLPSI 303 (769)
Q Consensus 243 ---------------l~~~~p~~---~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L 303 (769)
-.+.++.. .++|+.|+|++|.++....+..+..+++|+.|++++| +... ++.....+++|
T Consensus 262 ~~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L 340 (594)
T 2p1m_B 262 SGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDL 340 (594)
T ss_dssp HTCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTC
T ss_pred hcCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCC
Confidence 01112221 3566677777766543221223456667777777666 3221 11112245666
Q ss_pred CEEEc---------cCCcCCccccccCC-CCCCCcEEEccCCcCCCCCCcccc-ccCCCceEECC
Q 004195 304 TYLDI---------HGNKLTGLLLQNMS-CNPQLAFVDLSSNLLTGYLPSCLQ-VEAKTRLVLYS 357 (769)
Q Consensus 304 ~~L~l---------~~N~l~~~~~~~~~-~l~~L~~l~l~~N~l~g~~p~~~~-~~~~l~~l~l~ 357 (769)
+.|++ +.|.+++.....+. .+++|+.|+++.|.+++..+..+. .+++++.++++
T Consensus 341 ~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~ 405 (594)
T 2p1m_B 341 RELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLC 405 (594)
T ss_dssp CEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEE
T ss_pred CEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEee
Confidence 66666 23444443222222 256666666666666654443333 35566666665
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=99.51 E-value=3.9e-16 Score=180.44 Aligned_cols=63 Identities=8% Similarity=0.037 Sum_probs=30.6
Q ss_pred CCCCCCEEEccCCcCCccccccCCC-CCCCcEEEccCCcCCCCCCccc-cccCCCceEECCCCCCC
Q 004195 299 SLPSITYLDIHGNKLTGLLLQNMSC-NPQLAFVDLSSNLLTGYLPSCL-QVEAKTRLVLYSKNCLS 362 (769)
Q Consensus 299 ~l~~L~~L~l~~N~l~~~~~~~~~~-l~~L~~l~l~~N~l~g~~p~~~-~~~~~l~~l~l~~N~l~ 362 (769)
.+++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++..+..+ ..+++|+.+++++|.++
T Consensus 430 ~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~ 494 (594)
T 2p1m_B 430 HCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFG 494 (594)
T ss_dssp HCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCC
T ss_pred hCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCc
Confidence 444555555544 344333333332 4556666666665544333322 33455666666665553
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.49 E-value=1.4e-13 Score=131.40 Aligned_cols=109 Identities=28% Similarity=0.302 Sum_probs=97.7
Q ss_pred cCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEcc
Q 004195 137 SLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLS 216 (769)
Q Consensus 137 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls 216 (769)
..+.|++++|.++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 3578999999998 5887774 899999999999998889999999999999999999998888889999999999999
Q ss_pred CccccccCCC-CCCCccCcEEeccCCcCCCCCc
Q 004195 217 ANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFP 248 (769)
Q Consensus 217 ~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p 248 (769)
+|+|++.++. +..+++|+.|++++|.+....+
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9999988775 8899999999999998876544
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.47 E-value=2.1e-13 Score=130.49 Aligned_cols=107 Identities=25% Similarity=0.313 Sum_probs=96.1
Q ss_pred CceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccC
Q 004195 138 LEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSA 217 (769)
Q Consensus 138 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~ 217 (769)
-+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 378999999997 6888775 8999999999999998899999999999999999999987777789999999999999
Q ss_pred ccccccCCC-CCCCccCcEEeccCCcCCCCC
Q 004195 218 NHLSGEIPD-LRNLKNLRVFDVQDNYFGPRF 247 (769)
Q Consensus 218 N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~ 247 (769)
|+|++.++. +..+++|+.|++++|.+....
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred CccceeCHHHhccccCCCEEEeCCCCccccc
Confidence 999987776 888999999999999887543
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.44 E-value=2.2e-13 Score=144.99 Aligned_cols=242 Identities=14% Similarity=0.076 Sum_probs=170.7
Q ss_pred CCCCcEEEeecccccCCCCccccC-CCcCceeeccCcccC--CcCCccccCCCcCCEEEcccCcCCccCCccCcC-----
Q 004195 111 LSSLKVLSLVSLGLWGPLPGSIAH-SSSLEILNLSSNYLS--GSIPVQISSLRNLQTLILDDNKFTGAVPSELSL----- 182 (769)
Q Consensus 111 l~~L~~L~L~~n~l~g~~p~~~~~-l~~L~~L~Ls~N~l~--g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~----- 182 (769)
+.+++.|.++++ +.+.--..+.. +++|++|||++|++. ...+. .++.+..+.+..|. ..+..|.+
T Consensus 24 ~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~---~~~~~~~~~~~~~~---I~~~aF~~~~~~~ 96 (329)
T 3sb4_A 24 ANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAG---TYPNGKFYIYMANF---VPAYAFSNVVNGV 96 (329)
T ss_dssp HHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSS---SSGGGCCEEECTTE---ECTTTTEEEETTE
T ss_pred hCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccc---cccccccccccccc---cCHHHhccccccc
Confidence 667888998864 21111122333 788999999999998 32222 23335566666663 23456777
Q ss_pred ---CcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcC-------CCCCcccc
Q 004195 183 ---LQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYF-------GPRFPRLH 251 (769)
Q Consensus 183 ---l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l-------~~~~p~~~ 251 (769)
+++|+.|+|.. .++...+.+|.+|++|+.|+++.|.++...+. +..+.++..+.+..+.. ........
T Consensus 97 ~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~ 175 (329)
T 3sb4_A 97 TKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEG 175 (329)
T ss_dssp EEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEES
T ss_pred ccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccc
Confidence 99999999999 88877788999999999999999998755443 66676777666655221 10000001
Q ss_pred --------------------------cCCcEEEeCCccccCCcCchhh-cCCCcCcEEeccCccccccCCccCCCCCCCC
Q 004195 252 --------------------------KKMVTLVLRNNRFQFGLNPDEL-RSYNQLQKLDISLNRFVGPFIPSLLSLPSIT 304 (769)
Q Consensus 252 --------------------------~~L~~L~l~~N~~~~~i~p~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 304 (769)
.++..+.+.++-.... ...+ ..+++|+.|+|++|+++......|.++++|+
T Consensus 176 ~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~--~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~ 253 (329)
T 3sb4_A 176 EPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNAD--FKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLL 253 (329)
T ss_dssp CCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHH--HHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCC
T ss_pred cccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHH--HHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCC
Confidence 1223333332211100 1111 2378999999999999987777899999999
Q ss_pred EEEccCCcCCccccccCCCCCCCc-EEEccCCcCCCCCCccccccCCCceEECCCCCCChh
Q 004195 305 YLDIHGNKLTGLLLQNMSCNPQLA-FVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSNE 364 (769)
Q Consensus 305 ~L~l~~N~l~~~~~~~~~~l~~L~-~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~~ 364 (769)
.|+|.+| ++......|..+++|+ .+++.+ +++..-+.+|..+.+|+.++++.|.+...
T Consensus 254 ~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I 312 (329)
T 3sb4_A 254 KIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTL 312 (329)
T ss_dssp EEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEE
T ss_pred EEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCcc
Confidence 9999998 8888888999999999 999998 78877788999999999999988887643
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=99.40 E-value=1e-11 Score=135.23 Aligned_cols=222 Identities=14% Similarity=0.079 Sum_probs=113.7
Q ss_pred cccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcC
Q 004195 106 STLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQV 185 (769)
Q Consensus 106 ~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 185 (769)
.+|.++ +|+.++|.++ ++..-..+|.+. +|+.++|.+ .++..-+..|.+|++|+.++|++|+++......|. .++
T Consensus 130 ~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~ 204 (401)
T 4fdw_A 130 DAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAG 204 (401)
T ss_dssp TTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCC
T ss_pred hhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecc
Confidence 345553 5777776554 544444556663 577777764 45544556667777777777777766644444555 467
Q ss_pred CCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCC---CCcccccCCcEEEeCC
Q 004195 186 LSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGP---RFPRLHKKMVTLVLRN 261 (769)
Q Consensus 186 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~---~~p~~~~~L~~L~l~~ 261 (769)
|+.+.|..| ++..-..+|.++++|+.+++..| ++..-.. +.. .+|+.+.+.++ +.. .......+|+.+.+.+
T Consensus 205 L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp~~-i~~I~~~aF~~c~~L~~l~l~~ 280 (401)
T 4fdw_A 205 IEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLPNG-VTNIASRAFYYCPELAEVTTYG 280 (401)
T ss_dssp CSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEETT-CCEECTTTTTTCTTCCEEEEES
T ss_pred cCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeCCC-ccEEChhHhhCCCCCCEEEeCC
Confidence 777777643 55555566667777777776654 3222111 333 45555555332 211 1111133445555544
Q ss_pred cccc----CCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcC
Q 004195 262 NRFQ----FGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLL 337 (769)
Q Consensus 262 N~~~----~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l 337 (769)
|.+. ..+.+..|..|++|+.++|.+ .+...-...|.++++|+.++|..| ++..-...|..+ +|+.+++++|.+
T Consensus 281 ~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~ 357 (401)
T 4fdw_A 281 STFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTP 357 (401)
T ss_dssp SCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSC
T ss_pred ccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCC
Confidence 4332 013344455555555555552 243333344555555555555332 444444445555 555555555544
Q ss_pred CC
Q 004195 338 TG 339 (769)
Q Consensus 338 ~g 339 (769)
..
T Consensus 358 ~~ 359 (401)
T 4fdw_A 358 PQ 359 (401)
T ss_dssp CB
T ss_pred cc
Confidence 43
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.36 E-value=1.4e-12 Score=139.74 Aligned_cols=102 Identities=23% Similarity=0.231 Sum_probs=65.3
Q ss_pred EEeecc-cccCCCCccccCCCcCceeeccC-cccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCC
Q 004195 117 LSLVSL-GLWGPLPGSIAHSSSLEILNLSS-NYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNN 194 (769)
Q Consensus 117 L~L~~n-~l~g~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 194 (769)
++++++ ++++ +|. |..+++|++|+|++ |+|++..|..|++|++|++|+|++|+|++..|..|.+|++|++|+|++|
T Consensus 13 v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 455555 5543 555 66666677777764 6666655566666777777777777776666666666677777777777
Q ss_pred CCcccCCccccCCCCCCEEEccCcccc
Q 004195 195 SLSGFLPVSLTGLQSLRVVSLSANHLS 221 (769)
Q Consensus 195 ~l~~~~p~~l~~l~~L~~L~ls~N~l~ 221 (769)
+|++..+..|..++ |+.|+|++|.|.
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 66655545554444 666666666665
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=99.32 E-value=3.7e-11 Score=130.78 Aligned_cols=222 Identities=10% Similarity=0.093 Sum_probs=172.2
Q ss_pred ccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCc
Q 004195 105 FSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQ 184 (769)
Q Consensus 105 ~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 184 (769)
..+|.++ +|+.++|.+ .+...-+.+|.++++|+.++|+.|+++......|. +.+|+.+.|..| ++..-...|.+++
T Consensus 151 ~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~ 226 (401)
T 4fdw_A 151 DMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTS 226 (401)
T ss_dssp TTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCT
T ss_pred HHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCC
Confidence 4466664 799999985 67666678899999999999999999954445555 799999999855 7767778899999
Q ss_pred CCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCC-CCCCCccCcEEeccCCcCCC----CCc----ccccCCc
Q 004195 185 VLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIP-DLRNLKNLRVFDVQDNYFGP----RFP----RLHKKMV 255 (769)
Q Consensus 185 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p-~l~~l~~L~~l~l~~N~l~~----~~p----~~~~~L~ 255 (769)
+|+.++|..| ++..-..+|.+ .+|+.+.+. |.++.... .+..+++|+.+++.+|.+.. .++ ..+.+|+
T Consensus 227 ~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~ 303 (401)
T 4fdw_A 227 QLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLA 303 (401)
T ss_dssp TCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCC
T ss_pred CCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCC
Confidence 9999999976 66566678887 789999994 55654333 38899999999999887651 122 2356899
Q ss_pred EEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCC-CCcEEEccC
Q 004195 256 TLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNP-QLAFVDLSS 334 (769)
Q Consensus 256 ~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~-~L~~l~l~~ 334 (769)
.+.|.++ ++ .+....|..+++|+.++|..| ++..-...|.++ +|+.+++++|.+.......|..++ .+..|.+..
T Consensus 304 ~l~l~~~-i~-~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~ 379 (401)
T 4fdw_A 304 RFEIPES-IR-ILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPA 379 (401)
T ss_dssp EECCCTT-CC-EECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECG
T ss_pred eEEeCCc-eE-EEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCH
Confidence 9999854 55 466788999999999999665 666567789999 999999999988877777777664 566776655
Q ss_pred CcC
Q 004195 335 NLL 337 (769)
Q Consensus 335 N~l 337 (769)
|.+
T Consensus 380 ~~~ 382 (401)
T 4fdw_A 380 ESV 382 (401)
T ss_dssp GGH
T ss_pred HHH
Confidence 543
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.30 E-value=5.7e-12 Score=135.01 Aligned_cols=105 Identities=18% Similarity=0.120 Sum_probs=92.1
Q ss_pred ceeeccCc-ccCCcCCccccCCCcCCEEEccc-CcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEcc
Q 004195 139 EILNLSSN-YLSGSIPVQISSLRNLQTLILDD-NKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLS 216 (769)
Q Consensus 139 ~~L~Ls~N-~l~g~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls 216 (769)
..++++++ +|+ .+|. |..+++|++|+|++ |+|++..|..|++|++|++|+|++|+|++..|..|.+|++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35689998 898 4888 99999999999996 99998888999999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCccCcEEeccCCcCCC
Q 004195 217 ANHLSGEIPDLRNLKNLRVFDVQDNYFGP 245 (769)
Q Consensus 217 ~N~l~~~~p~l~~l~~L~~l~l~~N~l~~ 245 (769)
+|+|++.++.......|+.|++.+|.|..
T Consensus 89 ~N~l~~~~~~~~~~~~L~~l~l~~N~~~c 117 (347)
T 2ifg_A 89 FNALESLSWKTVQGLSLQELVLSGNPLHC 117 (347)
T ss_dssp SSCCSCCCSTTTCSCCCCEEECCSSCCCC
T ss_pred CCccceeCHHHcccCCceEEEeeCCCccC
Confidence 99999877764443348888888887764
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=1.1e-11 Score=127.09 Aligned_cols=147 Identities=8% Similarity=-0.052 Sum_probs=112.8
Q ss_pred HHHHhcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhcc-CCceeeEeeeeeccCCCCC
Q 004195 475 LKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLR-HSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 475 l~~~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~~ 553 (769)
+....++|.....++.|+.+.||++... |+.+++|+...........+.+|+++++.++ |..+.++++++.+.
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~----- 82 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHD----- 82 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEET-----
T ss_pred HHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecC-----
Confidence 4455567877888888889999999864 6789999987543234457999999999985 67788899887653
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccC------------------------------
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTG------------------------------ 603 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~------------------------------ 603 (769)
+..|+||||++|.+|.+.+.. ......++.+++++|+.||+.
T Consensus 83 --~~~~lv~e~i~G~~l~~~~~~------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (263)
T 3tm0_A 83 --GWSNLLMSEADGVLCSEEYED------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVD 154 (263)
T ss_dssp --TEEEEEEECCSSEEHHHHCCT------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCS
T ss_pred --CceEEEEEecCCeehhhccCC------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccc
Confidence 237999999999999876421 122346788999999999981
Q ss_pred --------------------------CCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 604 --------------------------IVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 604 --------------------------~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..+.++|+|++|.||+++++..+.|+||+.+.
T Consensus 155 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 155 CENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp GGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 01358999999999999876667899998753
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.22 E-value=8.4e-14 Score=150.19 Aligned_cols=110 Identities=25% Similarity=0.207 Sum_probs=56.6
Q ss_pred CCCcEEEeecccccCCCCccccC-----CCcCceeeccCcccCCcCCccc-cCCCcCCEEEcccCcCCccCCccC-----
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAH-----SSSLEILNLSSNYLSGSIPVQI-SSLRNLQTLILDDNKFTGAVPSEL----- 180 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~-----l~~L~~L~Ls~N~l~g~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~~----- 180 (769)
++|+.|+|++|.++......+.. ..+|++|||++|.++..-...+ ..+++|+.|+|++|.++..-...+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 45667777777665432222222 2566666666666653322222 234556666666666653322222
Q ss_pred cCCcCCCEEeccCCCCcc----cCCccccCCCCCCEEEccCcccc
Q 004195 181 SLLQVLSVLSLKNNSLSG----FLPVSLTGLQSLRVVSLSANHLS 221 (769)
Q Consensus 181 ~~l~~L~~L~L~~N~l~~----~~p~~l~~l~~L~~L~ls~N~l~ 221 (769)
...++|++|+|++|.++. .++..+..+++|++|+|++|.|+
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~ 196 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLG 196 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCC
Confidence 234556666666666543 12333345555556666555554
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.19 E-value=1.6e-13 Score=148.03 Aligned_cols=86 Identities=23% Similarity=0.193 Sum_probs=48.9
Q ss_pred CcCceeeccCcccCCcCCccccCC-----CcCCEEEcccCcCCccCCccC-cCCcCCCEEeccCCCCcccCCccc-----
Q 004195 136 SSLEILNLSSNYLSGSIPVQISSL-----RNLQTLILDDNKFTGAVPSEL-SLLQVLSVLSLKNNSLSGFLPVSL----- 204 (769)
Q Consensus 136 ~~L~~L~Ls~N~l~g~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~l----- 204 (769)
++|+.|+|++|.|+......|..+ ++|++|+|++|.++..-...+ ..+++|+.|+|++|.++......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 467777777777765433333322 577777777777654322222 235566777777776654333333
Q ss_pred cCCCCCCEEEccCcccc
Q 004195 205 TGLQSLRVVSLSANHLS 221 (769)
Q Consensus 205 ~~l~~L~~L~ls~N~l~ 221 (769)
...++|+.|+|++|.|+
T Consensus 152 ~~~~~L~~L~Ls~n~l~ 168 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLT 168 (372)
T ss_dssp STTCCCCEEECCSSCCH
T ss_pred hcCCccceeeCCCCCCC
Confidence 23455666666666654
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.18 E-value=5.7e-11 Score=121.51 Aligned_cols=135 Identities=10% Similarity=0.070 Sum_probs=97.4
Q ss_pred CCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCc--eeeEeeeeeccCCCCCCcceEE
Q 004195 482 FDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSN--LVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~n--Iv~l~~~~~~~~~~~~~~~~~~ 559 (769)
+....+.+.|..+.||++...+|+.+++|..... ....+.+|+++++.+++.+ +.+++++..+.+ ..+
T Consensus 22 ~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~-------~~~ 91 (264)
T 1nd4_A 22 YDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAG-------RDW 91 (264)
T ss_dssp CEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSS-------CEE
T ss_pred CceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCC-------CCE
Confidence 3333333455669999998777888999997643 2356889999999997555 455787765432 379
Q ss_pred EEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCC-----------------------------------
Q 004195 560 LIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGI----------------------------------- 604 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~----------------------------------- 604 (769)
+||||++|.++. ... .+ ...++.++++.|+.||+..
T Consensus 92 ~v~e~i~G~~l~--~~~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (264)
T 1nd4_A 92 LLLGEVPGQDLL--SSH----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEH 162 (264)
T ss_dssp EEEECCSSEETT--TSC----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGG
T ss_pred EEEEecCCcccC--cCc----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhc
Confidence 999999998884 221 12 2356777888888888641
Q ss_pred --------------------CCCccccCccccceeeCCCceeeecCCCCch
Q 004195 605 --------------------VPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 605 --------------------~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
.+.++|+|++|.||+++++..++|+|||.+.
T Consensus 163 ~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 163 QGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp TTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred cCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1239999999999999887777899999763
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=98.97 E-value=1e-09 Score=117.95 Aligned_cols=145 Identities=14% Similarity=0.187 Sum_probs=106.9
Q ss_pred CcCccccCCceeEEEEEeCCCcEEEEEEcc--ccC-CCChhHHHHHHHHHhhcc--CCceeeEeeeeeccCCCCCCcceE
Q 004195 484 SSSFMCDASHGQIYKGKLTDGTLVAIRSLK--MSK-KSSPHMYTYHIELISKLR--HSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 484 ~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~--~~~-~~~~~~~~~Ei~~l~~l~--H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
..+.++.|.++.||+....+ ..+++|+.. ... ......+.+|+.+++.++ +..+.++++++.+... .+..
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~----~g~~ 116 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESV----IGRA 116 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTT----TSSC
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCc----cCCe
Confidence 35678999999999998764 578888876 332 123457889999999997 4567888888865422 1336
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCC----------------------------------
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGI---------------------------------- 604 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~---------------------------------- 604 (769)
++||||++|..+.+... ..++..++..++.++++.|+.||+..
T Consensus 117 ~~vme~v~G~~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (359)
T 3dxp_A 117 FYIMEFVSGRVLWDQSL---PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETES 193 (359)
T ss_dssp EEEEECCCCBCCCCTTC---TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSC
T ss_pred EEEEEecCCeecCCCcc---ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcC
Confidence 89999999988754221 24678888999999999999999721
Q ss_pred ---------------------CCCccccCccccceeeCCCce--eeecCCCCchh
Q 004195 605 ---------------------VPGVFSNNLKITDVLLDENFH--VKINSYNLPLL 636 (769)
Q Consensus 605 ---------------------~~~ivHrDlKp~NILld~~~~--~kl~DFGla~~ 636 (769)
.+.++|+|++|.||+++.++. +.|.||+.+..
T Consensus 194 ~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 194 IPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp CHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred ChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 246999999999999987753 68999998754
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=98.83 E-value=6.2e-08 Score=105.37 Aligned_cols=216 Identities=11% Similarity=0.027 Sum_probs=88.9
Q ss_pred ccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCC
Q 004195 130 GSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQS 209 (769)
Q Consensus 130 ~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 209 (769)
.+|.++++|+.+.+.++..+ .-...|.++.+|+.+++..| ++..-...|.++..|+.+.+..+... +.......++
T Consensus 156 ~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~ 231 (394)
T 4fs7_A 156 EAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTG 231 (394)
T ss_dssp TTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCC
T ss_pred hhhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCC
Confidence 45566666666666544322 33445556666666666554 33333445555555655555544322 1222223344
Q ss_pred CCEEEccCccccccCCCCCCCccCcEEeccCCcCC--CCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCc
Q 004195 210 LRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFG--PRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLN 287 (769)
Q Consensus 210 L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~--~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N 287 (769)
|+.+.+..+.-.-.-..+..+..|+.+.+..+... .........+..+.+..+.+ ....+..+.+|+.+.+..+
T Consensus 232 l~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i----~~~~F~~~~~L~~i~l~~~ 307 (394)
T 4fs7_A 232 VKNIIIPDSFTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIV----PEKTFYGCSSLTEVKLLDS 307 (394)
T ss_dssp CCEEEECTTCCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEE----CTTTTTTCTTCCEEEECTT
T ss_pred CceEEECCCceecccccccccccceeEEcCCCcceeeccccccccccceeccCceee----ccccccccccccccccccc
Confidence 44444432211000011334444444444333211 00111122333333332221 1223444444444444432
Q ss_pred cccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEEC
Q 004195 288 RFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLY 356 (769)
Q Consensus 288 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l 356 (769)
+...-...|.++.+|+.++|.++ ++..-...|.++.+|+.+++..| ++-.-..+|..+.+|+.+.+
T Consensus 308 -i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~l 373 (394)
T 4fs7_A 308 -VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVEL 373 (394)
T ss_dssp -CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEE
T ss_pred -cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEE
Confidence 22222333444444555444322 33333344444445555544433 33233334444444444444
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.83 E-value=7.4e-10 Score=118.30 Aligned_cols=61 Identities=13% Similarity=0.145 Sum_probs=30.8
Q ss_pred CccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCcccc--CCCCCCEEEcc
Q 004195 153 PVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLT--GLQSLRVVSLS 216 (769)
Q Consensus 153 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~--~l~~L~~L~ls 216 (769)
+..+..+++|+.|+|++|.-. .+|. +. +++|+.|+|..|.++......+. .+++|+.|+|+
T Consensus 165 ~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~ 227 (362)
T 2ra8_A 165 SPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLY 227 (362)
T ss_dssp HHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEE
T ss_pred HHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEe
Confidence 344455566666666655211 2222 22 56666666666655432222332 56666666664
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=98.80 E-value=1.5e-09 Score=113.85 Aligned_cols=189 Identities=11% Similarity=0.078 Sum_probs=118.7
Q ss_pred cCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhcc-CCc--eeeEeeeeeccCCCCCCcceEEEE
Q 004195 485 SSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLR-HSN--LVSALGHCLDFSLDDPSISIIYLI 561 (769)
Q Consensus 485 ~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-H~n--Iv~l~~~~~~~~~~~~~~~~~~lV 561 (769)
.+.++.|....||+.. ..+++|+.... .....+.+|.++++.+. +.. +.+++.+..... .....|+|
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~----~~~~~~~v 94 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSE----TYQMSFAG 94 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCS----SCSCSCEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCC----CCCcceEE
Confidence 4668999999999874 46888886532 22467899999998884 332 334444432211 11234889
Q ss_pred EeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccC--------------------------------------
Q 004195 562 FEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTG-------------------------------------- 603 (769)
Q Consensus 562 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-------------------------------------- 603 (769)
|||++|.++.+... ..++..++..++.++++.|+.||+.
T Consensus 95 m~~i~G~~l~~~~~---~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (304)
T 3sg8_A 95 FTKIKGVPLTPLLL---NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMK 171 (304)
T ss_dssp EECCCCEECCHHHH---HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHH
T ss_pred EcccCCeECCcccc---ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHH
Confidence 99999988875332 1356667777788888888777751
Q ss_pred -----------------CCCCccccCccccceeeCC--CceeeecCCCCchhhhccCCcceeecC-CCcchhh----hcc
Q 004195 604 -----------------IVPGVFSNNLKITDVLLDE--NFHVKINSYNLPLLAEARGKGSAEVSS-PAKKTSV----LAR 659 (769)
Q Consensus 604 -----------------~~~~ivHrDlKp~NILld~--~~~~kl~DFGla~~~~~~~~~~~~~~~-~~~~pe~----~~~ 659 (769)
..+.++|+|++|.||++++ ...+.|+||+.+........-...... ....++. +..
T Consensus 172 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~ 251 (304)
T 3sg8_A 172 KVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNH 251 (304)
T ss_dssp HHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHH
Confidence 1245899999999999988 566889999987543211000000000 0011110 000
Q ss_pred -CCC---------CCCCCeeehhHHHHHHHhCCCCCC
Q 004195 660 -TEQ---------DDKSDVYDIGIILIEIIVGRPITS 686 (769)
Q Consensus 660 -~~~---------~~ksDVwS~Gvil~elltG~~p~~ 686 (769)
+.. ....+.|++|.++|++.+|.+++.
T Consensus 252 Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 252 YKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred cCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 000 112578999999999999987764
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=98.78 E-value=9.2e-08 Score=104.01 Aligned_cols=102 Identities=9% Similarity=0.079 Sum_probs=78.9
Q ss_pred ccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEE
Q 004195 251 HKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFV 330 (769)
Q Consensus 251 ~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l 330 (769)
...+..+.+..+... +....+..+..++.+.+..+.+. ...|..+.+|+.+.+..+ ++..-...|..+.+|+.+
T Consensus 252 ~~~l~~~~~~~~~~~--i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i 325 (394)
T 4fs7_A 252 CTDLESISIQNNKLR--IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSI 325 (394)
T ss_dssp CSSCCEEEECCTTCE--ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEE
T ss_pred cccceeEEcCCCcce--eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEE
Confidence 356777788776543 44677888999999988776542 346788999999999765 666667789999999999
Q ss_pred EccCCcCCCCCCccccccCCCceEECCCC
Q 004195 331 DLSSNLLTGYLPSCLQVEAKTRLVLYSKN 359 (769)
Q Consensus 331 ~l~~N~l~g~~p~~~~~~~~l~~l~l~~N 359 (769)
+|.++ ++-.-..+|..+.+|+.+.+..|
T Consensus 326 ~lp~~-v~~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 326 DLPYL-VEEIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp CCCTT-CCEECTTTTTTCTTCCEECCCTT
T ss_pred EeCCc-ccEEhHHhccCCCCCCEEEECcc
Confidence 99754 66555678888999999988765
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.78 E-value=7.9e-11 Score=119.39 Aligned_cols=104 Identities=20% Similarity=0.271 Sum_probs=68.4
Q ss_pred ccCCCcCce--eeccCcccC---CcCCccccCCCcCCEEEcccCcCCc--cCCccCcCCcCCCEEeccCCCCcccCCccc
Q 004195 132 IAHSSSLEI--LNLSSNYLS---GSIPVQISSLRNLQTLILDDNKFTG--AVPSELSLLQVLSVLSLKNNSLSGFLPVSL 204 (769)
Q Consensus 132 ~~~l~~L~~--L~Ls~N~l~---g~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l 204 (769)
|...+.|.. ++++.|+.. +.++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 445555655 667777432 2222233567788888888888876 4556677788888888888888765 334
Q ss_pred cCCC--CCCEEEccCccccccCCC--------CCCCccCcEEe
Q 004195 205 TGLQ--SLRVVSLSANHLSGEIPD--------LRNLKNLRVFD 237 (769)
Q Consensus 205 ~~l~--~L~~L~ls~N~l~~~~p~--------l~~l~~L~~l~ 237 (769)
..+. +|+.|+|++|.+++.+|. +..+++|+.||
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 4444 788888888888876663 44566666654
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.75 E-value=1.3e-09 Score=116.35 Aligned_cols=113 Identities=13% Similarity=0.061 Sum_probs=72.8
Q ss_pred cccCCCCCCcEEEeecccc---------cCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccC
Q 004195 106 STLGSLSSLKVLSLVSLGL---------WGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAV 176 (769)
Q Consensus 106 ~~~~~l~~L~~L~L~~n~l---------~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~ 176 (769)
.++..+++|+.|.+.++.. .+.++..+..+++|+.|+|++|.-. .+|. +. +++|+.|+|..|.++...
T Consensus 133 ~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~ 209 (362)
T 2ra8_A 133 ENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSV 209 (362)
T ss_dssp TTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHH
T ss_pred HhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHH
Confidence 3456788999999976543 1235566788899999999988411 2343 43 899999999998876443
Q ss_pred CccCc--CCcCCCEEeccC--CCCccc-----CCccc--cCCCCCCEEEccCcccc
Q 004195 177 PSELS--LLQVLSVLSLKN--NSLSGF-----LPVSL--TGLQSLRVVSLSANHLS 221 (769)
Q Consensus 177 p~~~~--~l~~L~~L~L~~--N~l~~~-----~p~~l--~~l~~L~~L~ls~N~l~ 221 (769)
...+. .+++|+.|+|+. |...+. +...+ ..+++|++|+|++|.+.
T Consensus 210 l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~ 265 (362)
T 2ra8_A 210 VEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQ 265 (362)
T ss_dssp HHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTH
T ss_pred HHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCc
Confidence 33444 789999999863 222111 01112 23566666666666654
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=98.64 E-value=2.4e-06 Score=92.73 Aligned_cols=246 Identities=13% Similarity=0.146 Sum_probs=134.7
Q ss_pred ccccCCCCCCcEEEeeccc---ccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCc
Q 004195 105 FSTLGSLSSLKVLSLVSLG---LWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELS 181 (769)
Q Consensus 105 ~~~~~~l~~L~~L~L~~n~---l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 181 (769)
..+|.++++|+.+.+..|. ++..-..+|.++.+|+.+.+..+ ++..-...|.++.+|+.+.+..+ +...-...|.
T Consensus 80 ~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~ 157 (394)
T 4gt6_A 80 SNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVTIPEG-VTSVADGMFS 157 (394)
T ss_dssp TTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEECCTT-CCEECTTTTT
T ss_pred HHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhcccccccccce-eeeeccccee
Confidence 3467777788887776653 43333456777777777776654 34344556777777777777654 3334455677
Q ss_pred CCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCC----------------
Q 004195 182 LLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGP---------------- 245 (769)
Q Consensus 182 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~---------------- 245 (769)
.+.+|+.+.+..+ ++..-..+|.+ .+|+.+.+..+-..-....+..+.+|.......+....
T Consensus 158 ~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (394)
T 4gt6_A 158 YCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTRIGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGDYAL 235 (394)
T ss_dssp TCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCEECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCEEE
T ss_pred cccccccccccce-eeEeccccccc-cceeEEEECCcccccccchhhhccccceecccccccccccceeecccccccccc
Confidence 7777777777654 33333344433 45666666543322111224444444444333221110
Q ss_pred ------------CCcc-----------cccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCC
Q 004195 246 ------------RFPR-----------LHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPS 302 (769)
Q Consensus 246 ------------~~p~-----------~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 302 (769)
.+|. ....|..+.+..+... +....|.+++.|+.+.+.. .+.......|.++.+
T Consensus 236 ~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~~--I~~~aF~~c~~L~~i~l~~-~i~~I~~~aF~~c~~ 312 (394)
T 4gt6_A 236 IRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVVS--IGTGAFMNCPALQDIEFSS-RITELPESVFAGCIS 312 (394)
T ss_dssp EECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCCE--ECTTTTTTCTTCCEEECCT-TCCEECTTTTTTCTT
T ss_pred cccccccccceEEcCCcceEcccceeeecccccEEecccccce--ecCcccccccccccccCCC-cccccCceeecCCCC
Confidence 0111 0133445555443322 3344566666666666642 344333445666777
Q ss_pred CCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCC
Q 004195 303 ITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKN 359 (769)
Q Consensus 303 L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N 359 (769)
|+.++|..+ ++..-...|..+.+|+.+.|..+ ++-.-..+|..+.+|+.+.+.+|
T Consensus 313 L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~ 367 (394)
T 4gt6_A 313 LKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGS 367 (394)
T ss_dssp CCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSC
T ss_pred cCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCc
Confidence 777777643 55444556667777777777543 44344456666677777766654
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.57 E-value=4.2e-09 Score=106.67 Aligned_cols=106 Identities=25% Similarity=0.172 Sum_probs=76.9
Q ss_pred cCCCCCCcE--EEeecccc---cCCCCccccCCCcCceeeccCcccCC--cCCccccCCCcCCEEEcccCcCCccCCccC
Q 004195 108 LGSLSSLKV--LSLVSLGL---WGPLPGSIAHSSSLEILNLSSNYLSG--SIPVQISSLRNLQTLILDDNKFTGAVPSEL 180 (769)
Q Consensus 108 ~~~l~~L~~--L~L~~n~l---~g~~p~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 180 (769)
|...+.|+. ++++.|.. .+.++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 333444444 55666632 22223333578899999999999998 5567788999999999999999865 445
Q ss_pred cCCc--CCCEEeccCCCCcccCCc-------cccCCCCCCEEEc
Q 004195 181 SLLQ--VLSVLSLKNNSLSGFLPV-------SLTGLQSLRVVSL 215 (769)
Q Consensus 181 ~~l~--~L~~L~L~~N~l~~~~p~-------~l~~l~~L~~L~l 215 (769)
..+. +|++|+|++|.+++.+|. .+..+++|+.||-
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LDg 258 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLDG 258 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEESS
T ss_pred hhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeECC
Confidence 5555 899999999999987763 3678889988863
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.45 E-value=1.9e-08 Score=96.84 Aligned_cols=116 Identities=10% Similarity=0.122 Sum_probs=77.8
Q ss_pred cccCCCCCCcEEEeecc-cccC----CCCccccCCCcCceeeccCcccCCc----CCccccCCCcCCEEEcccCcCCcc-
Q 004195 106 STLGSLSSLKVLSLVSL-GLWG----PLPGSIAHSSSLEILNLSSNYLSGS----IPVQISSLRNLQTLILDDNKFTGA- 175 (769)
Q Consensus 106 ~~~~~l~~L~~L~L~~n-~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~L~~N~l~~~- 175 (769)
..+...+.|+.|+|++| .+.. .+...+...++|++|+|++|.|... +...+...++|++|+|++|.|+..
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g 109 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSG 109 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHH
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHH
Confidence 35566788888888888 7753 2345566778888888888887632 334455567788888888887643
Q ss_pred ---CCccCcCCcCCCEEec--cCCCCccc----CCccccCCCCCCEEEccCcccc
Q 004195 176 ---VPSELSLLQVLSVLSL--KNNSLSGF----LPVSLTGLQSLRVVSLSANHLS 221 (769)
Q Consensus 176 ---~p~~~~~l~~L~~L~L--~~N~l~~~----~p~~l~~l~~L~~L~ls~N~l~ 221 (769)
+...+...++|++|+| ++|.++.. +...+...++|++|+|++|.+.
T Consensus 110 ~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 110 ILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 4455666677888888 67777643 2334445567777777777664
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=98.28 E-value=6.2e-05 Score=81.47 Aligned_cols=246 Identities=9% Similarity=0.064 Sum_probs=159.2
Q ss_pred cccCCC-CCCcEEEeecccccCCCCccccCCCcCceeeccCcc---cCCcCCccccCCCcCCEEEcccCcCCccCCccCc
Q 004195 106 STLGSL-SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNY---LSGSIPVQISSLRNLQTLILDDNKFTGAVPSELS 181 (769)
Q Consensus 106 ~~~~~l-~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~---l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 181 (769)
.+|.++ ..|+.+.+.++ ++..-..+|.++++|+.+.++.|. ++..-...|.++.+|+.+.+..+ ++..-...|.
T Consensus 57 ~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~ 134 (394)
T 4gt6_A 57 RVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFH 134 (394)
T ss_dssp TTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTT
T ss_pred hhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhh
Confidence 467777 46999999753 665566889999999999998875 65444678899999999988765 5545567899
Q ss_pred CCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCC--CCCcccccCCcEEEe
Q 004195 182 LLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFG--PRFPRLHKKMVTLVL 259 (769)
Q Consensus 182 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~--~~~p~~~~~L~~L~l 259 (769)
.+.+|+.+.+..+ +.......|.++.+|+.+.+..+ ++..-........|+.+.+..+... .........+.....
T Consensus 135 ~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~~~l~~i~ip~~~~~i~~~af~~c~~l~~~~~ 212 (394)
T 4gt6_A 135 HCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTGTALTQIHIPAKVTRIGTNAFSECFALSTITS 212 (394)
T ss_dssp TCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCCCSEEEECTTCCEECTTTTTTCTTCCEEEE
T ss_pred hhcccccccccce-eeeecccceecccccccccccce-eeEeccccccccceeEEEECCcccccccchhhhccccceecc
Confidence 9999999999765 44456678899999999999765 3322222223356777776543211 000000111221111
Q ss_pred CCc------------------------------------cccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCC
Q 004195 260 RNN------------------------------------RFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSI 303 (769)
Q Consensus 260 ~~N------------------------------------~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 303 (769)
..+ .+. .+....|..+..|+.+.+..+.. ..-...|.++++|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~-~i~~~aF~~c~~L~~i~lp~~~~-~I~~~aF~~c~~L 290 (394)
T 4gt6_A 213 DSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVA-RIETHAFDSCAYLASVKMPDSVV-SIGTGAFMNCPAL 290 (394)
T ss_dssp CCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEE-EECTTTTTTCSSCCEEECCTTCC-EECTTTTTTCTTC
T ss_pred cccccccccceeecccccccccccccccccccceEEcCCcce-EcccceeeecccccEEecccccc-eecCccccccccc
Confidence 111 011 12234567777888888765533 2234567778888
Q ss_pred CEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCC
Q 004195 304 TYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKN 359 (769)
Q Consensus 304 ~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N 359 (769)
+.+.+. +.++......|..+.+|+.++|..| ++-.-..+|..+.+|+.+.+..+
T Consensus 291 ~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s 344 (394)
T 4gt6_A 291 QDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS 344 (394)
T ss_dssp CEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT
T ss_pred ccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc
Confidence 888885 4566666677888888888888754 55444566777777777776443
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.28 E-value=7.3e-08 Score=92.74 Aligned_cols=115 Identities=16% Similarity=0.158 Sum_probs=74.2
Q ss_pred CccccCCCcCceeeccCc-ccCCc----CCccccCCCcCCEEEcccCcCCcc----CCccCcCCcCCCEEeccCCCCccc
Q 004195 129 PGSIAHSSSLEILNLSSN-YLSGS----IPVQISSLRNLQTLILDDNKFTGA----VPSELSLLQVLSVLSLKNNSLSGF 199 (769)
Q Consensus 129 p~~~~~l~~L~~L~Ls~N-~l~g~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~ 199 (769)
...+...++|++|+|++| .|... +...+...++|++|+|++|.|... +...+...++|++|+|++|.++..
T Consensus 29 ~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~ 108 (185)
T 1io0_A 29 KRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGS 108 (185)
T ss_dssp HHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHH
T ss_pred HHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHH
Confidence 345677888889999888 77632 344566678888888888887632 334455567788888888887643
Q ss_pred ----CCccccCCCCCCEEEc--cCccccccCC-----CCCCCccCcEEeccCCcC
Q 004195 200 ----LPVSLTGLQSLRVVSL--SANHLSGEIP-----DLRNLKNLRVFDVQDNYF 243 (769)
Q Consensus 200 ----~p~~l~~l~~L~~L~l--s~N~l~~~~p-----~l~~l~~L~~l~l~~N~l 243 (769)
+...+...++|++|+| ++|.++..-. .+...++|+.|++++|.+
T Consensus 109 g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 109 GILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 3455666677777777 6677654211 133345566666555544
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.23 E-value=4.9e-06 Score=86.87 Aligned_cols=137 Identities=10% Similarity=-0.025 Sum_probs=90.3
Q ss_pred cCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCC---ceeeEeeeeeccCCCCCCcceEEEE
Q 004195 485 SSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHS---NLVSALGHCLDFSLDDPSISIIYLI 561 (769)
Q Consensus 485 ~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~---nIv~l~~~~~~~~~~~~~~~~~~lV 561 (769)
.+.++.|....||+. |..+++|+... ......+.+|.++++.+++. .+.+++.++... .+..++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~------~g~~~~v 91 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRS------DGNPFVG 91 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECT------TSCEEEE
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccC------CCceEEE
Confidence 456788888999988 56788888532 12245788999999999753 245666665421 1236899
Q ss_pred EeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccC--------------------------------------
Q 004195 562 FEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTG-------------------------------------- 603 (769)
Q Consensus 562 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-------------------------------------- 603 (769)
|||++|.++.+.... .++..++..++.++++.|+.||+.
T Consensus 92 ~e~i~G~~l~~~~~~---~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~ 168 (306)
T 3tdw_A 92 YRKVQGQILGEDGMA---VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESL 168 (306)
T ss_dssp EECCCSEECHHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHH
T ss_pred EeccCCeECchhhhh---hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhh
Confidence 999999888653211 133344444444444444444432
Q ss_pred -------------------CCCCccccCccccceeeCC---Cce-eeecCCCCchh
Q 004195 604 -------------------IVPGVFSNNLKITDVLLDE---NFH-VKINSYNLPLL 636 (769)
Q Consensus 604 -------------------~~~~ivHrDlKp~NILld~---~~~-~kl~DFGla~~ 636 (769)
..+.++|+|++|.||++++ ++. +.|.||+.+..
T Consensus 169 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 169 RDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2235799999999999987 355 58999997643
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=98.22 E-value=3.3e-06 Score=86.39 Aligned_cols=134 Identities=13% Similarity=-0.022 Sum_probs=89.9
Q ss_pred ccccCCce-eEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhcc-CCceeeEeeeeeccCCCCCCcceEEEEEe
Q 004195 487 FMCDASHG-QIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLR-HSNLVSALGHCLDFSLDDPSISIIYLIFE 563 (769)
Q Consensus 487 ~iG~G~~g-~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~~~lV~E 563 (769)
.+..|..| .||+.... ++..+++|+-... ...++.+|...|+.+. +--+.++++++.+.+ ..++|||
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~-------~~~lvme 100 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPD-------DAWLLTT 100 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETT-------EEEEEEE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECC-------eEEEEEE
Confidence 44556555 69998865 5678899986532 3457889999998884 323567777776533 3799999
Q ss_pred ccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccC----------------------------------------
Q 004195 564 YAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTG---------------------------------------- 603 (769)
Q Consensus 564 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~---------------------------------------- 603 (769)
++++.++.+..... ......++.++++.|+-||+.
T Consensus 101 ~l~G~~~~~~~~~~-----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (272)
T 4gkh_A 101 AIPGKTAFQVLEEY-----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWP 175 (272)
T ss_dssp CCCSEEHHHHHHHC-----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCC
T ss_pred eeCCccccccccCC-----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchH
Confidence 99998876654311 112223444455555555431
Q ss_pred ---------------CCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 604 ---------------IVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 604 ---------------~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..+.++|+|+.+.||++++++.+-|.||+.+.
T Consensus 176 ~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 176 VEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 11237899999999999988777899998764
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=2.3e-06 Score=91.57 Aligned_cols=83 Identities=6% Similarity=-0.053 Sum_probs=56.7
Q ss_pred Ccc-ccCCceeEEEEEeC-------CCcEEEEEEccccC---CCChhHHHHHHHHHhhcc-C--CceeeEeeeeeccCCC
Q 004195 486 SFM-CDASHGQIYKGKLT-------DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLR-H--SNLVSALGHCLDFSLD 551 (769)
Q Consensus 486 ~~i-G~G~~g~Vy~~~~~-------~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~-H--~nIv~l~~~~~~~~~~ 551 (769)
+.| +.|....+|+.... +++.+++|+..... ......+.+|+.+++.++ + -.+.++++++.+...
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~- 104 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV- 104 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT-
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc-
Confidence 566 78888999998764 26688899875432 112356888999998885 3 346678877654321
Q ss_pred CCCcceEEEEEeccCCCchhh
Q 004195 552 DPSISIIYLIFEYAPNETLRS 572 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~ 572 (769)
.+..++||||++|..+.+
T Consensus 105 ---~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 ---LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp ---TSSCEEEEECCCCBCCCB
T ss_pred ---cCCceEEEEecCCCChhh
Confidence 123589999999876653
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=98.19 E-value=8.8e-05 Score=79.77 Aligned_cols=240 Identities=11% Similarity=0.034 Sum_probs=121.4
Q ss_pred cccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcC
Q 004195 106 STLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQV 185 (769)
Q Consensus 106 ~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 185 (769)
.+|.++++|+.++|.++ ++..-..+|.++ +|+.+.+..+ ++..-...|.. .+|+.+.+..+ ++..-...|.+. +
T Consensus 63 ~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~lp~~-~~~i~~~~F~~~-~ 136 (379)
T 4h09_A 63 ANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDFEFPGA-TTEIGNYIFYNS-S 136 (379)
T ss_dssp TTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEEECCTT-CCEECTTTTTTC-C
T ss_pred HHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcccccCCCc-cccccccccccc-e
Confidence 46788888888888654 554445677776 5777776644 44333344544 47888888765 332333445544 5
Q ss_pred CCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCC------------------------------------CCCC
Q 004195 186 LSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIP------------------------------------DLRN 229 (769)
Q Consensus 186 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p------------------------------------~l~~ 229 (769)
|+.+.+..+ ++..-...|.++.+++.+.+..+....... .+..
T Consensus 137 l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~ 215 (379)
T 4h09_A 137 VKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVKTVTAYGFSY 215 (379)
T ss_dssp CCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCCEECTTTTTT
T ss_pred eeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccceeEEeeccccc
Confidence 666655543 444555677777888877766543221100 0122
Q ss_pred CccCcEEeccCCcC--CCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEE
Q 004195 230 LKNLRVFDVQDNYF--GPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLD 307 (769)
Q Consensus 230 l~~L~~l~l~~N~l--~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 307 (769)
..+|+.+.+..+-- ..........|..+.+..+ ++ .+....|..+.+|+.+.+..+ +.......|.++++|+.+.
T Consensus 216 ~~~l~~i~~~~~~~~i~~~~f~~~~~L~~i~lp~~-v~-~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~ 292 (379)
T 4h09_A 216 GKNLKKITITSGVTTLGDGAFYGMKALDEIAIPKN-VT-SIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVV 292 (379)
T ss_dssp CSSCSEEECCTTCCEECTTTTTTCSSCCEEEECTT-CC-EECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEE
T ss_pred ccccceeeeccceeEEccccccCCccceEEEcCCC-cc-EeCccccceeehhcccccccc-ceecccccccccccccccc
Confidence 22333333322200 0000001234444444433 21 232444555555655555432 3322233455566666666
Q ss_pred ccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEEC
Q 004195 308 IHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLY 356 (769)
Q Consensus 308 l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l 356 (769)
+.++.++..-...|.++.+|+.++|..+ ++-.-..+|..+.+|+.+.+
T Consensus 293 l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~i 340 (379)
T 4h09_A 293 MDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISY 340 (379)
T ss_dssp ECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCC
T ss_pred ccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEE
Confidence 6655555555555666666666666433 33233344555555554444
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=97.94 E-value=6.1e-05 Score=81.66 Aligned_cols=75 Identities=7% Similarity=-0.033 Sum_probs=49.0
Q ss_pred cCccccCCceeEEEEEeC-CCcEEEEEEccccCC-------CChhHHHHHHHHHhhccC--Cce-eeEeeeeeccCCCCC
Q 004195 485 SSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-------SSPHMYTYHIELISKLRH--SNL-VSALGHCLDFSLDDP 553 (769)
Q Consensus 485 ~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-------~~~~~~~~Ei~~l~~l~H--~nI-v~l~~~~~~~~~~~~ 553 (769)
.+.||.|..+.||+++.. +++.|+||....... ...+.+.+|.++++.+.. +.. .+++.+.. +.
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d~--~~--- 109 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDT--EM--- 109 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEET--TT---
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEcC--Cc---
Confidence 467899999999999865 478899998653211 123567889999988742 333 35554321 11
Q ss_pred CcceEEEEEeccCCC
Q 004195 554 SISIIYLIFEYAPNE 568 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~g 568 (769)
.++||||+++.
T Consensus 110 ----~~lvmE~l~g~ 120 (397)
T 2olc_A 110 ----AVTVMEDLSHL 120 (397)
T ss_dssp ----TEEEECCCTTS
T ss_pred ----cEEEEEeCCCc
Confidence 47999999864
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=97.88 E-value=0.00086 Score=71.92 Aligned_cols=243 Identities=10% Similarity=0.025 Sum_probs=149.7
Q ss_pred cccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcC
Q 004195 106 STLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQV 185 (769)
Q Consensus 106 ~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 185 (769)
+++....+|+.+.+.. .++..-..+|.++.+|+.++|..+ ++..-..+|.++ +|+.+.+..| ++..-...|.. .+
T Consensus 40 ~~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~ 114 (379)
T 4h09_A 40 PWYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TD 114 (379)
T ss_dssp TTGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CC
T ss_pred cccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CC
Confidence 3456667888888864 455555678999999999999765 665556678887 6888887654 55344556665 48
Q ss_pred CCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCC-------------------
Q 004195 186 LSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPR------------------- 246 (769)
Q Consensus 186 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~------------------- 246 (769)
|+.+.+..+ ++..-...|.+. +|+.+.+..+--.-....+..+.+|+...+..+.....
T Consensus 115 L~~i~lp~~-~~~i~~~~F~~~-~l~~~~~~~~v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (379)
T 4h09_A 115 LDDFEFPGA-TTEIGNYIFYNS-SVKRIVIPKSVTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPA 192 (379)
T ss_dssp CSEEECCTT-CCEECTTTTTTC-CCCEEEECTTCCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCT
T ss_pred cccccCCCc-cccccccccccc-eeeeeeccceeeccccchhcccccccccccccccceeecccceecccccceeccccc
Confidence 999999865 333344555554 56666665432111122355666666665544322100
Q ss_pred --------Ccc-----------cccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEE
Q 004195 247 --------FPR-----------LHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLD 307 (769)
Q Consensus 247 --------~p~-----------~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 307 (769)
+|. ....+..+.+..+-- .+....+..+..|+.+.+..+ ++..-...|.++.+|+.+.
T Consensus 193 ~~~~~~~~~~~~~~~i~~~~f~~~~~l~~i~~~~~~~--~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~ 269 (379)
T 4h09_A 193 AKTGTEFTIPSTVKTVTAYGFSYGKNLKKITITSGVT--TLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLN 269 (379)
T ss_dssp TCCCSEEECCTTCCEECTTTTTTCSSCSEEECCTTCC--EECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEE
T ss_pred cccccccccccceeEEeecccccccccceeeecccee--EEccccccCCccceEEEcCCC-ccEeCccccceeehhcccc
Confidence 000 012344444433311 222445666777777777654 4443445677777888887
Q ss_pred ccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCC
Q 004195 308 IHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKN 359 (769)
Q Consensus 308 l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N 359 (769)
+..+ ++......|..+++|+.+++.++.++..-..+|..+.+|+.+.+..+
T Consensus 270 l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~ 320 (379)
T 4h09_A 270 FYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA 320 (379)
T ss_dssp ECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT
T ss_pred cccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc
Confidence 7543 55555567777888888888877777666677777777887777543
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=97.84 E-value=8.6e-05 Score=76.57 Aligned_cols=77 Identities=14% Similarity=0.142 Sum_probs=56.9
Q ss_pred CCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCC---ceeeEeeeeeccCCCCCCcceE
Q 004195 482 FDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHS---NLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~---nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
......+|.|..+.||+.+..||+.|.+|+-..........|.+|...|+.+.-. -+.+++++.. -
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~~-----------~ 85 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWDD-----------R 85 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEET-----------T
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEeccC-----------c
Confidence 3445778999999999999999999999987655444456789999999888421 2445554422 2
Q ss_pred EEEEeccCCCc
Q 004195 559 YLIFEYAPNET 569 (769)
Q Consensus 559 ~lV~Ey~~~gs 569 (769)
++||||++++.
T Consensus 86 ~lv~e~l~~~~ 96 (288)
T 3f7w_A 86 TLAMEWVDERP 96 (288)
T ss_dssp EEEEECCCCCC
T ss_pred eEEEEeecccC
Confidence 78999998654
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.72 E-value=4.5e-05 Score=80.73 Aligned_cols=143 Identities=12% Similarity=0.114 Sum_probs=79.2
Q ss_pred CccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccC--CceeeEeeeeeccCCCCCCcceEEEEEe
Q 004195 486 SFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRH--SNLVSALGHCLDFSLDDPSISIIYLIFE 563 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H--~nIv~l~~~~~~~~~~~~~~~~~~lV~E 563 (769)
..|+.|..+.||++...+| .+++|+... ....+..|..+++.++. -.+.+++... ++..-....+..++|||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~----~~~~~~~e~~~l~~L~~~g~~vp~~~~~~-~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHR----PEKKALFSIFAQDYLAKKGMNVPGILPNK-KGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECS----CHHHHHHHHHHHHHHHHHTCSSCCBCCCT-TSCSCEEETTEEEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCC----CHHHHHHHHHHHHHHHHcCCCCCceeecC-CCCEEEEECCEEEEEEE
Confidence 4465677899999987655 488998864 23455567777766641 1233333211 00000001234789999
Q ss_pred ccCCCchh-----------h---hhc---C-C--C-------CCCCHHHHH-----------------------------
Q 004195 564 YAPNETLR-----------S---FIS---G-P--G-------YKLTWVQRI----------------------------- 587 (769)
Q Consensus 564 y~~~gsL~-----------~---~l~---~-~--~-------~~l~~~~~~----------------------------- 587 (769)
|++|..+. + .+| . . . ..-.|....
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99986542 0 111 1 0 0 012343211
Q ss_pred --HHHHHHHHHhccccc----------CCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 588 --AAAIAIVKGVQFLHT----------GIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 588 --~i~~~ia~gL~yLH~----------~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
.+...+.+++++|+. ...+.++|+|+++.||+++.++.+.|+||+.+
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a 250 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTV 250 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTC
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhc
Confidence 011123345666653 12358999999999999988888999999865
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00019 Score=74.63 Aligned_cols=137 Identities=13% Similarity=0.139 Sum_probs=89.3
Q ss_pred CcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhcc---CCceeeEeeeeeccCCCCCCcceEEE
Q 004195 484 SSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLR---HSNLVSALGHCLDFSLDDPSISIIYL 560 (769)
Q Consensus 484 ~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~---H~nIv~l~~~~~~~~~~~~~~~~~~l 560 (769)
..+.|+.|....+|+... ++..+++|+.... ....+.+|.+.|+.+. ...+.++++++... +..++
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~-------g~~~l 108 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQ-------GHSFL 108 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECS-------SEEEE
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecC-------CceEE
Confidence 346789999999999986 4667888987643 3567899999998884 25677888877542 23799
Q ss_pred EEeccCCCchhh--------h---hcCC-C-C-------------------CCCHHHHH---HHHH--H-----------
Q 004195 561 IFEYAPNETLRS--------F---ISGP-G-Y-------------------KLTWVQRI---AAAI--A----------- 592 (769)
Q Consensus 561 V~Ey~~~gsL~~--------~---l~~~-~-~-------------------~l~~~~~~---~i~~--~----------- 592 (769)
||||+++..+.. . ++.. . . .-+|.... ++.. +
T Consensus 109 vme~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~ 188 (312)
T 3jr1_A 109 LLEALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGN 188 (312)
T ss_dssp EEECCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSC
T ss_pred EEEeccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHH
Confidence 999999876421 1 1211 0 0 12465322 1111 1
Q ss_pred ---HHHH-hccccc-CCCCCccccCccccceeeCCCceeeecCCC
Q 004195 593 ---IVKG-VQFLHT-GIVPGVFSNNLKITDVLLDENFHVKINSYN 632 (769)
Q Consensus 593 ---ia~g-L~yLH~-~~~~~ivHrDlKp~NILld~~~~~kl~DFG 632 (769)
+++. ...|.. ...|.++|+|+.+.|++++.++ +.|.||.
T Consensus 189 ~~~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 189 IDLIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 1111 123321 2356899999999999999887 8899984
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=97.46 E-value=3.6e-05 Score=72.13 Aligned_cols=82 Identities=11% Similarity=0.139 Sum_probs=36.9
Q ss_pred cCceeeccCcccCCcCCccccCCCcCCEEEcccCc-CCccCCccCcCC----cCCCEEeccCCC-CcccCCccccCCCCC
Q 004195 137 SLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNK-FTGAVPSELSLL----QVLSVLSLKNNS-LSGFLPVSLTGLQSL 210 (769)
Q Consensus 137 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~p~~l~~l~~L 210 (769)
+|+.|||+++.++..--..+.++++|+.|+|+++. ++..-=..+..+ ++|++|+|+++. +|..--..+.++++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 34555555554443222334455555555555553 332111122322 245555555543 442222334455666
Q ss_pred CEEEccCc
Q 004195 211 RVVSLSAN 218 (769)
Q Consensus 211 ~~L~ls~N 218 (769)
+.|+++++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 66666654
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00042 Score=72.54 Aligned_cols=164 Identities=13% Similarity=0.117 Sum_probs=89.8
Q ss_pred cccCHHHHHHHhcCCCC-----cCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCce--ee
Q 004195 468 RTFTLDELKEATDCFDS-----SSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNL--VS 540 (769)
Q Consensus 468 ~~~~~~el~~~t~~f~~-----~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nI--v~ 540 (769)
..++.+++......|.. .+.|+.|....+|+....+| .+++|..... ...+.+..|+.++..++...+ .+
T Consensus 5 ~~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~ 81 (322)
T 2ppq_A 5 TDITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPL 81 (322)
T ss_dssp CCCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCC
T ss_pred ccCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCc
Confidence 34667777777777764 23456687889999987666 5788988642 233567788888887753222 33
Q ss_pred EeeeeeccCCCCCCcceEEEEEeccCCCchhh-----------h---hc----C--CCC-----CCCHHHHHHH------
Q 004195 541 ALGHCLDFSLDDPSISIIYLIFEYAPNETLRS-----------F---IS----G--PGY-----KLTWVQRIAA------ 589 (769)
Q Consensus 541 l~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~-----------~---l~----~--~~~-----~l~~~~~~~i------ 589 (769)
++... ++..-....+..+++|||++|..+.. . ++ . ... ...|.....-
T Consensus 82 ~~~~~-~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 160 (322)
T 2ppq_A 82 PLPRK-DGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERAD 160 (322)
T ss_dssp BCCBT-TCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGG
T ss_pred ccCCC-CCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHH
Confidence 33211 10000000134689999998765321 0 11 1 000 0124321110
Q ss_pred ------HHHHHHHhccccc----CCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 590 ------AIAIVKGVQFLHT----GIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 590 ------~~~ia~gL~yLH~----~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
...+.+.++++++ ...+.++|+|+.+.||+++++..+.|+||+.+.
T Consensus 161 ~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 161 EVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp GTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 0012233333332 123479999999999999987666899998763
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0017 Score=67.96 Aligned_cols=162 Identities=6% Similarity=0.050 Sum_probs=90.7
Q ss_pred cccCHHHHHHHhcCCCC-----cCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCc--eee
Q 004195 468 RTFTLDELKEATDCFDS-----SSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSN--LVS 540 (769)
Q Consensus 468 ~~~~~~el~~~t~~f~~-----~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~n--Iv~ 540 (769)
...+.+++..+.+.|.. ...++ |....||+....+|+.+++|...... ...+.+..|..+++.++... +.+
T Consensus 9 ~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~ 86 (328)
T 1zyl_A 9 QTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAA 86 (328)
T ss_dssp CCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCC
T ss_pred CCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecc
Confidence 34555666555554432 23466 77889999887778789999986432 24567888999888885222 344
Q ss_pred EeeeeeccCCCCCCcceEEEEEeccCCCchhh-----------h---hc----CC----CCCCCHHHH------------
Q 004195 541 ALGHCLDFSLDDPSISIIYLIFEYAPNETLRS-----------F---IS----GP----GYKLTWVQR------------ 586 (769)
Q Consensus 541 l~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~-----------~---l~----~~----~~~l~~~~~------------ 586 (769)
++.. ++..-....+..++||||++|..+.. . ++ .. ....++...
T Consensus 87 ~~~~--~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 164 (328)
T 1zyl_A 87 PVAF--NGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDAT 164 (328)
T ss_dssp CCCB--TTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCS
T ss_pred eeec--CCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcC
Confidence 4433 11110001234688999998754321 1 11 10 112232211
Q ss_pred ----------HHHHHHHHHHhcc-cccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 587 ----------IAAAIAIVKGVQF-LHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 587 ----------~~i~~~ia~gL~y-LH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
...+..++..++- +.....+.++|+|+++.||+++ + .+.|.||+.+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~ 222 (328)
T 1zyl_A 165 LIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR 222 (328)
T ss_dssp SSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence 0011111111211 1111234689999999999999 4 88999998653
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0011 Score=72.25 Aligned_cols=30 Identities=7% Similarity=0.252 Sum_probs=26.5
Q ss_pred CCccccCccccceeeCCCceeeecCCCCchh
Q 004195 606 PGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 606 ~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
+.++|+|++|.|||++.++ +++.||+.+..
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~ 261 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFY 261 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence 4899999999999998776 99999998754
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0001 Score=69.11 Aligned_cols=84 Identities=11% Similarity=0.051 Sum_probs=59.9
Q ss_pred CCCcEEEeecccccCCCCccccCCCcCceeeccCcc-cCCcCCccccCC----CcCCEEEcccCc-CCccCCccCcCCcC
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNY-LSGSIPVQISSL----RNLQTLILDDNK-FTGAVPSELSLLQV 185 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l----~~L~~L~L~~N~-l~~~~p~~~~~l~~ 185 (769)
.+|+.|||+++.++..--..+.++++|+.|+|++|. |+..-=..++.+ ++|++|+|++|. ++..-=..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 468889999888765433457788899999999885 664333345554 379999999874 66433345677899
Q ss_pred CCEEeccCCC
Q 004195 186 LSVLSLKNNS 195 (769)
Q Consensus 186 L~~L~L~~N~ 195 (769)
|++|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 9999998874
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0014 Score=67.79 Aligned_cols=71 Identities=6% Similarity=-0.040 Sum_probs=44.5
Q ss_pred cCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCce-eeEeeeeeccCCCCCCcceEEEEEe
Q 004195 485 SSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNL-VSALGHCLDFSLDDPSISIIYLIFE 563 (769)
Q Consensus 485 ~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nI-v~l~~~~~~~~~~~~~~~~~~lV~E 563 (769)
.+.|+.|....+|+. ..+++|+...... ...+..+|..+++.+....+ .++++++.+ . -++|+|
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~-~~~~r~~E~~~l~~l~~~g~~P~~~~~~~~--~-------~~~v~e 87 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTE-EYINRANEAVAAREAAKAGVSPEVLHVDPA--T-------GVMVTR 87 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECTT--T-------CCEEEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCcc-ceeCHHHHHHHHHHHHHcCCCCceEEEECC--C-------CEEEEe
Confidence 577888999999999 4588888764321 11234668888877753233 355554322 1 268999
Q ss_pred cc-CCCch
Q 004195 564 YA-PNETL 570 (769)
Q Consensus 564 y~-~~gsL 570 (769)
|+ ++.++
T Consensus 88 ~i~~g~~l 95 (301)
T 3dxq_A 88 YIAGAQTM 95 (301)
T ss_dssp CCTTCEEC
T ss_pred ecCCCccC
Confidence 99 65444
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0029 Score=66.45 Aligned_cols=30 Identities=7% Similarity=0.043 Sum_probs=26.2
Q ss_pred CCccccCccccceeeCCC----ceeeecCCCCch
Q 004195 606 PGVFSNNLKITDVLLDEN----FHVKINSYNLPL 635 (769)
Q Consensus 606 ~~ivHrDlKp~NILld~~----~~~kl~DFGla~ 635 (769)
+.++|||+.+.||+++.+ ..+.|.||+.+.
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~ 216 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAK 216 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCE
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcC
Confidence 479999999999999875 678999999764
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0046 Score=65.94 Aligned_cols=138 Identities=11% Similarity=0.046 Sum_probs=82.2
Q ss_pred CccccCCceeEEEEEeC--------CCcEEEEEEccccCCCChhHHHHHHHHHhhcc-CCceeeEeeeeeccCCCCCCcc
Q 004195 486 SFMCDASHGQIYKGKLT--------DGTLVAIRSLKMSKKSSPHMYTYHIELISKLR-HSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~--------~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
+.+..|-...+|++... +++.+++|+... .........+|.++++.+. +.-..++++++.+
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~-~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~--------- 125 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA-ILQGVDSLVLESVMFAILAERSLGPQLYGVFPE--------- 125 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT---------
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC-ccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC---------
Confidence 45666778899999874 247899998632 2234567789999998885 3333566666532
Q ss_pred eEEEEEeccCCCchhhh-----------------hcCC----CCCCC--HHHHHHHHHHHHHH-----------------
Q 004195 557 IIYLIFEYAPNETLRSF-----------------ISGP----GYKLT--WVQRIAAAIAIVKG----------------- 596 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~-----------------l~~~----~~~l~--~~~~~~i~~~ia~g----------------- 596 (769)
.+||||++|..+..- +|.. +.... |.+..++..++...
T Consensus 126 --g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~ 203 (379)
T 3feg_A 126 --GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLK 203 (379)
T ss_dssp --EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHH
T ss_pred --ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHH
Confidence 389999998655311 1111 11122 45555555444221
Q ss_pred --hcc----ccc-CCCCCccccCccccceeeCCC----ceeeecCCCCch
Q 004195 597 --VQF----LHT-GIVPGVFSNNLKITDVLLDEN----FHVKINSYNLPL 635 (769)
Q Consensus 597 --L~y----LH~-~~~~~ivHrDlKp~NILld~~----~~~kl~DFGla~ 635 (769)
++. |.. .....++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 204 ~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 204 DEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 112 211 122368999999999999876 689999998763
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.005 Score=67.42 Aligned_cols=74 Identities=12% Similarity=-0.033 Sum_probs=48.0
Q ss_pred cCccccCCceeEEEEEeCC-CcEEEEEEccccCCCChhHHHHHHHHHhhccCCce-eeEeeeeeccCCCCCCcceEEEEE
Q 004195 485 SSFMCDASHGQIYKGKLTD-GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNL-VSALGHCLDFSLDDPSISIIYLIF 562 (769)
Q Consensus 485 ~~~iG~G~~g~Vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nI-v~l~~~~~~~~~~~~~~~~~~lV~ 562 (769)
.+.|+.|-...+|++...+ +..+++|+..... ...-+..+|..+++.+...++ .++++++.. .+||
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~~~idR~~E~~vl~~L~~~gl~P~ll~~~~~-----------G~v~ 180 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKT-DEIINREREKKISCILYNKNIAKKIYVFFTN-----------GRIE 180 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-C-CSCSCHHHHHHHHHHHTTSSSBCCEEEEETT-----------EEEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCCh-hhhcCHHHHHHHHHHHHhcCCCCCEEEEeCC-----------eEEE
Confidence 3567778889999999865 5788888774321 111123688999998865444 466666521 3599
Q ss_pred eccCCCch
Q 004195 563 EYAPNETL 570 (769)
Q Consensus 563 Ey~~~gsL 570 (769)
||++|.++
T Consensus 181 e~I~G~~l 188 (458)
T 2qg7_A 181 EFMDGYAL 188 (458)
T ss_dssp ECCCSEEC
T ss_pred EeeCCccC
Confidence 99987554
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0048 Score=67.20 Aligned_cols=73 Identities=15% Similarity=0.148 Sum_probs=50.4
Q ss_pred cCccccCCceeEEEEEeCC--------CcEEEEEEccccCCCChhHHHHHHHHHhhccCCce-eeEeeeeeccCCCCCCc
Q 004195 485 SSFMCDASHGQIYKGKLTD--------GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNL-VSALGHCLDFSLDDPSI 555 (769)
Q Consensus 485 ~~~iG~G~~g~Vy~~~~~~--------g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nI-v~l~~~~~~~~~~~~~~ 555 (769)
.+.|+.|....||++...+ +..+++|+.... ...+.+.+|..+++.+...++ .++++.+.+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~-------- 147 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG-------- 147 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT--------
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC--------
Confidence 3567788889999998753 478999987421 222566789999988853333 566665532
Q ss_pred ceEEEEEeccCCCch
Q 004195 556 SIIYLIFEYAPNETL 570 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL 570 (769)
.+||||++|.++
T Consensus 148 ---g~v~e~l~G~~l 159 (429)
T 1nw1_A 148 ---GRLEEYIPSRPL 159 (429)
T ss_dssp ---EEEECCCCEEEC
T ss_pred ---CEEEEEeCCccc
Confidence 389999986444
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0024 Score=56.87 Aligned_cols=11 Identities=36% Similarity=0.613 Sum_probs=4.1
Q ss_pred CEEEcccCcCC
Q 004195 163 QTLILDDNKFT 173 (769)
Q Consensus 163 ~~L~L~~N~l~ 173 (769)
++|+|++|+|+
T Consensus 34 ~~L~Ls~N~l~ 44 (130)
T 3rfe_A 34 TELVLTGNNLT 44 (130)
T ss_dssp SEEECTTSCCS
T ss_pred CEEECCCCcCC
Confidence 33333333333
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0028 Score=56.38 Aligned_cols=56 Identities=25% Similarity=0.296 Sum_probs=34.4
Q ss_pred EEEeeccccc-CCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCC
Q 004195 116 VLSLVSLGLW-GPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFT 173 (769)
Q Consensus 116 ~L~L~~n~l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~ 173 (769)
.++.++++++ ..+|..+. .+|++|+|++|+|+...+..|..+++|++|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 3455555554 24454332 35777777777777555556677777777777777653
|
| >3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* | Back alignment and structure |
|---|
Probab=96.53 E-value=0.004 Score=66.42 Aligned_cols=73 Identities=14% Similarity=0.034 Sum_probs=44.0
Q ss_pred CccccCCceeEEEEEeCC---------CcEEEEEEccccCCCChhHHHHHHHHHhhccCCc-eeeEeeeeeccCCCCCCc
Q 004195 486 SFMCDASHGQIYKGKLTD---------GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSN-LVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~~---------g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~n-Iv~l~~~~~~~~~~~~~~ 555 (769)
..++.|....+|+....+ +..+++|+...... ...+..+|.++++.+...+ +.++++...
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~~--------- 108 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTFN--------- 108 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEET---------
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEecC---------
Confidence 456778888999998754 26788888753211 1113467888888885333 346665431
Q ss_pred ceEEEEEeccCCCch
Q 004195 556 SIIYLIFEYAPNETL 570 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL 570 (769)
-++||||++|..+
T Consensus 109 --~~~v~e~i~G~~l 121 (369)
T 3c5i_A 109 --GGRIEEWLYGDPL 121 (369)
T ss_dssp --TEEEEECCCSEEC
T ss_pred --CcEEEEEecCCcC
Confidence 1689999987544
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0005 Score=65.63 Aligned_cols=112 Identities=18% Similarity=0.182 Sum_probs=59.6
Q ss_pred cCCCCCCcEEEeecc-cccC----CCCccccCCCcCceeeccCcccCCc----CCccccCCCcCCEEEcccCcCCcc---
Q 004195 108 LGSLSSLKVLSLVSL-GLWG----PLPGSIAHSSSLEILNLSSNYLSGS----IPVQISSLRNLQTLILDDNKFTGA--- 175 (769)
Q Consensus 108 ~~~l~~L~~L~L~~n-~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~L~~N~l~~~--- 175 (769)
+.+-+.|+.|+|++| .+.. .+-..+..-+.|+.|+|++|+|... +-..+..-+.|++|+|+.|.|+..
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 344567778888775 5532 1333455566777777777777522 223333456677777777776532
Q ss_pred -CCccCcCCcCCCEEeccCC---CCccc----CCccccCCCCCCEEEccCcc
Q 004195 176 -VPSELSLLQVLSVLSLKNN---SLSGF----LPVSLTGLQSLRVVSLSANH 219 (769)
Q Consensus 176 -~p~~~~~l~~L~~L~L~~N---~l~~~----~p~~l~~l~~L~~L~ls~N~ 219 (769)
+-..+..-+.|++|+|++| .+... +...+..=+.|+.|+++.|.
T Consensus 117 ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCC
Confidence 2223444455666666644 22211 22233333556666665544
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=96.11 E-value=0.001 Score=63.50 Aligned_cols=88 Identities=16% Similarity=0.143 Sum_probs=49.5
Q ss_pred cccCCCcCceeeccCc-ccCC----cCCccccCCCcCCEEEcccCcCCcc----CCccCcCCcCCCEEeccCCCCccc--
Q 004195 131 SIAHSSSLEILNLSSN-YLSG----SIPVQISSLRNLQTLILDDNKFTGA----VPSELSLLQVLSVLSLKNNSLSGF-- 199 (769)
Q Consensus 131 ~~~~l~~L~~L~Ls~N-~l~g----~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~-- 199 (769)
.+.+-+.|+.|+|++| .|.. .+-..+..-+.|+.|+|++|+|... +...+..-+.|+.|+|++|.|+..
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga 115 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL 115 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHH
Confidence 3455667888888875 6542 1233455556777777777777522 223334456677777777776532
Q ss_pred --CCccccCCCCCCEEEccCc
Q 004195 200 --LPVSLTGLQSLRVVSLSAN 218 (769)
Q Consensus 200 --~p~~l~~l~~L~~L~ls~N 218 (769)
+-..+..=+.|+.|+|++|
T Consensus 116 ~ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 116 ARLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHHhhCCceeEEECCCC
Confidence 1223333345666666543
|
| >3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* | Back alignment and structure |
|---|
Probab=95.67 E-value=0.035 Score=58.23 Aligned_cols=30 Identities=13% Similarity=0.277 Sum_probs=26.8
Q ss_pred CCccccCccccceeeCCCceeeecCCCCch
Q 004195 606 PGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 606 ~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
+.++|+|+.+.||++++++.+.+.||+.+.
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~ 235 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPM 235 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCe
Confidence 479999999999999988889999998764
|
| >3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=95.10 E-value=0.12 Score=55.81 Aligned_cols=74 Identities=9% Similarity=0.024 Sum_probs=48.3
Q ss_pred cCccccCCceeEEEEEeCC--------CcEEEEEEccccCCCChhHHHHHHHHHhhcc-CCceeeEeeeeeccCCCCCCc
Q 004195 485 SSFMCDASHGQIYKGKLTD--------GTLVAIRSLKMSKKSSPHMYTYHIELISKLR-HSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 485 ~~~iG~G~~g~Vy~~~~~~--------g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.+.+..|-...+|+....+ ++.+++|+..... ...-+..+|..+++.+. +.-..++++.+.
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~~--------- 144 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADFP--------- 144 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET---------
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEcC---------
Confidence 3456667788999998763 5789998864322 12223567888888885 332345555432
Q ss_pred ceEEEEEeccCCCch
Q 004195 556 SIIYLIFEYAPNETL 570 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL 570 (769)
-+.||||++|..|
T Consensus 145 --~~~I~efI~G~~l 157 (424)
T 3mes_A 145 --EGRIEEFIDGEPL 157 (424)
T ss_dssp --TEEEEECCCSEEC
T ss_pred --CCEEEEEeCCccC
Confidence 1689999998664
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=94.94 E-value=0.021 Score=54.74 Aligned_cols=100 Identities=9% Similarity=-0.007 Sum_probs=63.5
Q ss_pred CchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhccCCcceee
Q 004195 568 ETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEV 647 (769)
Q Consensus 568 gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~~~~~ 647 (769)
-+|.++|...+.++++.+.+.++.|.+++|.-+-....+ ..+=+-|..|++..+|.+...+ +.+. . .
T Consensus 33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~-----~-----~ 99 (229)
T 2yle_A 33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADD-----A-----G 99 (229)
T ss_dssp EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-cccc-----c-----c
Confidence 479999986666899999999999999998765110000 1122346889999999988875 2111 0 0
Q ss_pred cCCCcchhhhccCCCCCCCCeeehhHHHHHHHhC
Q 004195 648 SSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVG 681 (769)
Q Consensus 648 ~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG 681 (769)
.....+|+.. ....+.+.=|||+|+++|.-+--
T Consensus 100 ~~~~~~pe~~-~~~~te~~~IysLG~tLY~ALDy 132 (229)
T 2yle_A 100 EPPPVAGKLG-YSQCMETEVIESLGIIIYKALDY 132 (229)
T ss_dssp -------CCS-SSSSCHHHHHHHHHHHHHHHHTT
T ss_pred ccCCCChhhc-cccchHHHHHHHHHHHHHHHhhc
Confidence 1112223322 23456777899999999998863
|
| >3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A* | Back alignment and structure |
|---|
Probab=90.63 E-value=0.74 Score=49.23 Aligned_cols=28 Identities=14% Similarity=0.272 Sum_probs=23.7
Q ss_pred ccccCccccceee------CCCceeeecCCCCch
Q 004195 608 VFSNNLKITDVLL------DENFHVKINSYNLPL 635 (769)
Q Consensus 608 ivHrDlKp~NILl------d~~~~~kl~DFGla~ 635 (769)
++|+|+.+.||++ +++..++++||-.|.
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 5799999999999 456679999998764
|
| >2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=84.08 E-value=0.065 Score=36.76 Aligned_cols=29 Identities=21% Similarity=0.243 Sum_probs=12.7
Q ss_pred CCcceeeeeecceehhhhhhheeeeeeee
Q 004195 390 NKSSYASSVVGGTVGGIAVVGAVLLVVKK 418 (769)
Q Consensus 390 ~~~~~~~~iv~~~~~~~~~~~~~~~~~~~ 418 (769)
...++++++++|+++.++++++++++++|
T Consensus 9 ~~~~IA~gVVgGv~~~~ii~~~~~~~~RR 37 (44)
T 2ks1_B 9 KIPSIATGMVGALLLLLVVALGIGLFMRR 37 (44)
T ss_dssp CSSSSTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcceEEeehhHHHHHHHHHHHHHHHHhhh
Confidence 33444445555444443333344444444
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 769 | ||||
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 5e-32 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 6e-32 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 2e-29 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 4e-29 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 9e-29 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 3e-28 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 3e-27 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 3e-27 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 4e-27 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 8e-27 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 3e-26 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 3e-26 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 4e-26 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 9e-26 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 1e-25 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 3e-25 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 3e-25 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 3e-25 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 2e-24 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 2e-24 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 3e-24 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 4e-24 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 9e-24 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 1e-23 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 1e-23 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 2e-23 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 2e-23 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 1e-22 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 2e-22 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 3e-22 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 3e-22 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 1e-21 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 2e-21 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 4e-21 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 8e-20 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 2e-19 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 3e-19 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 4e-19 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 5e-19 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 6e-19 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 9e-19 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 1e-18 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 1e-18 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 2e-18 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 2e-18 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 4e-07 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 7e-05 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 8e-05 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 2e-18 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 5e-18 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 1e-17 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 2e-17 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 1e-16 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 1e-16 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 8e-16 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 1e-14 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 8e-12 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 2e-16 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 1e-15 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 6e-15 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 7e-15 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 2e-14 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 3e-14 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 4e-14 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 2e-13 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 2e-12 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 3e-12 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 3e-12 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 7e-12 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 7e-10 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 7e-09 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 6e-08 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 2e-11 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 2e-10 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 6e-07 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 6e-10 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 6e-09 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 0.004 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 4e-09 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 1e-08 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 1e-08 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 7e-08 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 2e-07 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 0.002 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 0.004 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-07 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 4e-07 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 9e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 1e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 3e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.002 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.002 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.002 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.004 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 7e-07 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 3e-06 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 0.001 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 1e-06 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 7e-06 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 7e-05 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 8e-05 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 4e-04 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 0.001 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 0.001 | |
| d2omxa2 | 199 | c.10.2.1 (A:37-235) Internalin B {Listeria monocyt | 4e-04 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 0.001 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 0.002 | |
| d1m9la_ | 198 | c.10.3.1 (A:) Outer arm dynein light chain 1 {Gree | 0.001 |
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 123 bits (311), Expect = 5e-32
Identities = 51/272 (18%), Positives = 108/272 (39%), Gaps = 33/272 (12%)
Query: 492 SHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYH--IELISKLRHSNLVSALGHCLDFS 549
S G +YKGK VA++ L ++ + + + + ++ K RH N++ +G+
Sbjct: 20 SFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-- 75
Query: 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVF 609
+ ++ ++ +L + K ++ I A +G+ +LH +
Sbjct: 76 ------PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSII 126
Query: 610 SNNLKITDVLLDENFHVKINSYNLPLLA---EARGKGSAEVSSPAKKTSVLARTEQ---- 662
+LK ++ L E+ VKI + L + + S + R +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 663 DDKSDVYDIGIILIEIIVGR-PITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSD 721
+SDVY GI+L E++ G+ P ++ N + ++ + + P +++
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG---------RGYLSPD-LSKVRS 236
Query: 722 ESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
K M L CL + +RP L +++
Sbjct: 237 NCPKAMKRLMAECLKKKRDERPLFPQILASIE 268
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 124 bits (311), Expect = 6e-32
Identities = 56/295 (18%), Positives = 115/295 (38%), Gaps = 31/295 (10%)
Query: 492 SHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLD 551
G++++GK G VA++ ++ S I LRH N++ + D
Sbjct: 15 RFGEVWRGKWR-GEEVAVKIFSSREERSWFREA-EIYQTVMLRHENILGFIAADNK---D 69
Query: 552 DPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIV-----P 606
+ + + ++L+ +Y + +L +++ Y +T I A++ G+ LH IV P
Sbjct: 70 NGTWTQLWLVSDYHEHGSLFDYLNR--YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 127
Query: 607 GVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQ---- 662
+ +LK ++L+ +N I L + ++ + T E
Sbjct: 128 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 187
Query: 663 --------DDKSDVYDIGIILIEIIVGRPI--TSENVVVLVKDLLQVNIGTDEARKSIVD 712
++D+Y +G++ EI I E+ + DL+ + +E RK + +
Sbjct: 188 INMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCE 247
Query: 713 PAVMNEC-----SDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQGLK 762
+ S E+L+ M ++ C R + L +Q +G+K
Sbjct: 248 QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGIK 302
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 115 bits (290), Expect = 2e-29
Identities = 46/267 (17%), Positives = 98/267 (36%), Gaps = 31/267 (11%)
Query: 492 SHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLD 551
G + GK VAI+ +K S +++ L H LV G C
Sbjct: 16 QFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE-EAKVMMNLSHEKLVQLYGVCTK---Q 71
Query: 552 DPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSN 611
P I++I EY N L +++ ++ Q + + + +++L +
Sbjct: 72 RP----IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHR 124
Query: 612 NLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKTS--VLARTEQDDKSDV 668
+L + L+++ VK++ + L + + S P + + VL ++ KSD+
Sbjct: 125 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 184
Query: 669 YDIGIILIEIIVG--RPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKR 726
+ G+++ EI P + + Q + + S++
Sbjct: 185 WAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG-----------LRLYRPHLASEK---- 229
Query: 727 MMELCLRCLSNEPKDRPSVEDTLWNLQ 753
+ + C + +RP+ + L N+
Sbjct: 230 VYTIMYSCWHEKADERPTFKILLSNIL 256
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 115 bits (288), Expect = 4e-29
Identities = 59/272 (21%), Positives = 103/272 (37%), Gaps = 41/272 (15%)
Query: 492 SHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLD 551
G+++ G T VA++SLK S L+ +L+H LV +
Sbjct: 25 QFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-EANLMKQLQHQRLVRLYAVVTQEPI- 82
Query: 552 DPSISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFS 610
Y+I EY N +L F+ P G KLT + + A I +G+ F+
Sbjct: 83 -------YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIH 132
Query: 611 NNLKITDVLLDENFHVKINSYNLPLLAEA-------RGKGSAEVSSPAKKTSVLARTEQD 663
+L+ ++L+ + KI + L L E K + ++P +
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAP----EAINYGTFT 188
Query: 664 DKSDVYDIGIILIEIIVGR--PITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSD 721
KSDV+ GI+L EI+ P ++++L + + C +
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-----------YRMVRPDNCPE 237
Query: 722 ESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
E + +L C P+DRP+ + L+
Sbjct: 238 E----LYQLMRLCWKERPEDRPTFDYLRSVLE 265
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 114 bits (285), Expect = 9e-29
Identities = 51/267 (19%), Positives = 100/267 (37%), Gaps = 31/267 (11%)
Query: 492 SHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLD 551
G ++ G + VAI++++ S E++ KL H LV G CL+
Sbjct: 17 QFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE-EAEVMMKLSHPKLVQLYGVCLE---Q 72
Query: 552 DPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSN 611
P I L+FE+ + L ++ + + + +G + V
Sbjct: 73 AP----ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEG---MAYLEEACVIHR 125
Query: 612 NLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKTS--VLARTEQDDKSDV 668
+L + L+ EN +K++ + + + + + S P K S V + + KSDV
Sbjct: 126 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 185
Query: 669 YDIGIILIEIIVGR--PITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKR 726
+ G+++ E+ P + + +V+D+ + P S
Sbjct: 186 WSFGVLMWEVFSEGKIPYENRSNSEVVEDIST--------GFRLYKP---RLASTH---- 230
Query: 727 MMELCLRCLSNEPKDRPSVEDTLWNLQ 753
+ ++ C P+DRP+ L L
Sbjct: 231 VYQIMNHCWKERPEDRPAFSRLLRQLA 257
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 112 bits (281), Expect = 3e-28
Identities = 50/268 (18%), Positives = 100/268 (37%), Gaps = 37/268 (13%)
Query: 492 SHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLD 551
G + G G VA++ + ++ + ++++LRHSNLV LG ++
Sbjct: 19 EFGDVMLGDYR-GNKVAVK--CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE---- 71
Query: 552 DPSISIIYLIFEYAPNETLRSFISGPGYK-LTWVQRIAAAIAIVKGVQFLHTGIVPGVFS 610
+Y++ EY +L ++ G L + ++ + + +++L
Sbjct: 72 --EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVH 126
Query: 611 NNLKITDVLLDENFHVKINSYNLPLLAEAR---GKGSAEVSSPAKKTSVLARTEQDDKSD 667
+L +VL+ E+ K++ + L A + GK + ++P L + KSD
Sbjct: 127 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAP----EALREKKFSTKSD 182
Query: 668 VYDIGIILIEIIVGR--PITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLK 725
V+ GI+L EI P + +V + + + C
Sbjct: 183 VWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-----------EKGYKMDAPDGCPPA--- 228
Query: 726 RMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
+ E+ C + RPS L+
Sbjct: 229 -VYEVMKNCWHLDAAMRPSFLQLREQLE 255
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 110 bits (276), Expect = 3e-27
Identities = 59/275 (21%), Positives = 101/275 (36%), Gaps = 37/275 (13%)
Query: 492 SHGQIYKGKLTD----GTLVAIRSLKMSKKSSPHMYTYH-IELISKLRHSNLVSALGHCL 546
G +Y G L D A++SL ++ H N++S LG CL
Sbjct: 39 HFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL 98
Query: 547 DFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVP 606
++ Y + LR+FI + T I + + KG++FL +
Sbjct: 99 RSE------GSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS---K 149
Query: 607 GVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKT------SVLART 660
+L + +LDE F VK+ + L + S + AK L
Sbjct: 150 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 209
Query: 661 EQDDKSDVYDIGIILIEIIVGR--PITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNE 718
+ KSDV+ G++L E++ P N + LLQ + ++ P
Sbjct: 210 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ--------GRRLLQP---EY 258
Query: 719 CSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
C D + E+ L+C + + RPS + + +
Sbjct: 259 CPDP----LYEVMLKCWHPKAEMRPSFSELVSRIS 289
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 110 bits (275), Expect = 3e-27
Identities = 50/308 (16%), Positives = 98/308 (31%), Gaps = 48/308 (15%)
Query: 469 TFTLDELKEATDCFDSSSFMCDA---------SHGQIYKGKLT----DGTLVAIRSLKMS 515
FT ++ EA F + G++ G L VAI++LK
Sbjct: 6 PFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSG 65
Query: 516 KKSSPHMYTYH-IELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFI 574
++ + H N++ G P + +I E+ N +L SF+
Sbjct: 66 YTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTK---STP----VMIITEFMENGSLDSFL 118
Query: 575 SGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634
+ T +Q + I G+++L +L ++L++ N K++ + L
Sbjct: 119 RQNDGQFTVIQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFGLS 175
Query: 635 LLAEARGKGSAEVSSPAKKTS-------VLARTEQDDKSDVYDIGIILIEIIVG--RPIT 685
E S+ K + + SDV+ GI++ E++ RP
Sbjct: 176 RFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYW 235
Query: 686 SENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSV 745
++ ++ + + +L L C + RP
Sbjct: 236 DMTNQDVIN---------------AIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKF 280
Query: 746 EDTLWNLQ 753
+ L
Sbjct: 281 GQIVNTLD 288
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 109 bits (274), Expect = 4e-27
Identities = 61/267 (22%), Positives = 100/267 (37%), Gaps = 31/267 (11%)
Query: 492 SHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLD 551
G+++ G T VAI++LK S +++ KLRH LV
Sbjct: 29 CFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQLYAVV------ 81
Query: 552 DPSISIIYLIFEYAPNETLRSFISGPGYKLT-WVQRIAAAIAIVKGVQFLHTGIVPGVFS 610
S IY++ EY +L F+ G K Q + A I G+ ++
Sbjct: 82 --SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 136
Query: 611 NNLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKTS--VLARTEQDDKSD 667
+L+ ++L+ EN K+ + L L+ + P K T+ KSD
Sbjct: 137 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 196
Query: 668 VYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKR 726
V+ GI+L E+ GR V V D + + EC +
Sbjct: 197 VWSFGILLTELTTKGRVPYPGMVNREVLDQV----------ERGYRMPCPPECPES---- 242
Query: 727 MMELCLRCLSNEPKDRPSVEDTLWNLQ 753
+ +L +C EP++RP+ E L+
Sbjct: 243 LHDLMCQCWRKEPEERPTFEYLQAFLE 269
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 108 bits (270), Expect = 8e-27
Identities = 52/269 (19%), Positives = 103/269 (38%), Gaps = 31/269 (11%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYH--IELISKLRHSNLVSALGHCLDF 548
S+G+ K + +DG ++ + L + + L+ +L+H N+V +D
Sbjct: 16 SYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIID- 74
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYK---LTWVQRIAAAIAIVKGVQFLH--TG 603
+ + +Y++ EY L S I+ + L + + ++ H +
Sbjct: 75 ----RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 130
Query: 604 IVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTS--VLARTE 661
V +LK +V LD +VK+ + L + + S + R
Sbjct: 131 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMS 190
Query: 662 QDDKSDVYDIGIILIEIIVGR-PITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECS 720
++KSD++ +G +L E+ P T+ + L + + + S
Sbjct: 191 YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKF-----------RRIPYRYS 239
Query: 721 DESLKRMMELCLRCLSNEPKDRPSVEDTL 749
DE + E+ R L+ + RPSVE+ L
Sbjct: 240 DE----LNEIITRMLNLKDYHRPSVEEIL 264
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 107 bits (267), Expect = 3e-26
Identities = 48/289 (16%), Positives = 99/289 (34%), Gaps = 50/289 (17%)
Query: 492 SHGQIYKGKL---TDGTLVAIRSLKM-SKKSSPHMYTYHIELISKLRHSNLVSALGHCLD 547
+ G + +G VAI+ LK ++K+ +++ +L + +V +G C
Sbjct: 21 NFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA 80
Query: 548 FSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPG 607
+L L+ E A L F+ G ++ + G+++L
Sbjct: 81 EAL--------MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE---KN 129
Query: 608 VFSNNLKITDVLLDENFHVKI---------NSYNLPLLAEARGKGSAEVSSPAKKTSVLA 658
+L +VLL + KI + + A + GK + +P +
Sbjct: 130 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAP----ECIN 185
Query: 659 RTEQDDKSDVYDIGIILIEIIVG--RPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM 716
+ +SDV+ G+ + E + +P ++ + Q
Sbjct: 186 FRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK-----------RMECP 234
Query: 717 NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ-----FATQIQG 760
EC E + L C + +DRP ++ A++++G
Sbjct: 235 PECPPE----LYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEG 279
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 106 bits (266), Expect = 3e-26
Identities = 53/266 (19%), Positives = 97/266 (36%), Gaps = 30/266 (11%)
Query: 492 SHGQIYKGKLTD-GTLVAIRSLKMSKKSSPHMYTYH--IELISKLRHSNLVSALGHCLDF 548
S +YKG T+ VA L+ K + + E++ L+H N+V
Sbjct: 21 SFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST 80
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
I L+ E + TL++++ + + I+KG+QFLHT P +
Sbjct: 81 VKGKKCI---VLVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHTR-TPPI 135
Query: 609 FSNNLKITDVLL-DENFHVKINSYNLPLLAEARG----KGSAEVSSPAKKTSVLARTEQD 663
+LK ++ + VKI L L A G+ E +P + + D
Sbjct: 136 IHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPE-----MYEEKYD 190
Query: 664 DKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDES 723
+ DVY G+ ++E+ SE + + + +
Sbjct: 191 ESVDVYAFGMCMLEMATSEYPYSECQNA------------AQIYRRVTSGVKPASFDKVA 238
Query: 724 LKRMMELCLRCLSNEPKDRPSVEDTL 749
+ + E+ C+ +R S++D L
Sbjct: 239 IPEVKEIIEGCIRQNKDERYSIKDLL 264
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 106 bits (266), Expect = 4e-26
Identities = 55/285 (19%), Positives = 106/285 (37%), Gaps = 33/285 (11%)
Query: 492 SHGQIYKGKLTD-GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550
+G++Y+G VA+++LK ++ +++H NLV LG C
Sbjct: 29 QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREP- 86
Query: 551 DDPSISIIYLIFEYAPNETLRSFI-SGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVF 609
Y+I E+ L ++ +++ V + A I +++L
Sbjct: 87 ------PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFI 137
Query: 610 SNNLKITDVLLDENFHVKI-NSYNLPLLAEARGKGSAEVSSPAKKTS--VLARTEQDDKS 666
+L + L+ EN VK+ + L+ A P K T+ LA + KS
Sbjct: 138 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 197
Query: 667 DVYDIGIILIEIIVGR--PITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESL 724
DV+ G++L EI P ++ + + +++ E +
Sbjct: 198 DVWAFGVLLWEIATYGMSPYPGIDLSQVYE---------------LLEKDYRMERPEGCP 242
Query: 725 KRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQGLKENNQEAL 769
+++ EL C P DRPS + + Q + + ++ L
Sbjct: 243 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 287
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 106 bits (265), Expect = 9e-26
Identities = 56/267 (20%), Positives = 100/267 (37%), Gaps = 37/267 (13%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTY---HIELISKLRHSNLVSALGHCLD 547
S G +Y + + + +VAI+ + S K S + + + KLRH N + G L
Sbjct: 27 SFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR 86
Query: 548 FSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPG 607
+L+ EY L V+ A ++G+ +LH+
Sbjct: 87 EH-------TAWLVMEYCLGSASDLLEVHKK-PLQEVEIAAVTHGALQGLAYLHS---HN 135
Query: 608 VFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQ----D 663
+ ++K ++LL E VK+ + A ++ V +P + D
Sbjct: 136 MIHRDVKAGNILLSEPGLVKLGDFGS---ASIMAPANSFVGTPYWMAPEVILAMDEGQYD 192
Query: 664 DKSDVYDIGIILIEIIVGR-PITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDE 722
K DV+ +GI IE+ + P+ + N + + + Q PA+ + E
Sbjct: 193 GKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE-----------SPALQSGHWSE 241
Query: 723 SLKRMMELCLRCLSNEPKDRPSVEDTL 749
+ CL P+DRP+ E L
Sbjct: 242 YFR---NFVDSCLQKIPQDRPTSEVLL 265
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 105 bits (262), Expect = 1e-25
Identities = 40/267 (14%), Positives = 94/267 (35%), Gaps = 32/267 (11%)
Query: 492 SHGQIYKGKLTD-GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550
+ G++YK + + L A + + + Y I++++ H N+V L +
Sbjct: 24 AFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN- 82
Query: 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFS 610
++++ E+ + + + LT Q + + +LH +
Sbjct: 83 ------NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD---NKIIH 133
Query: 611 NNLKITDVLLDENFHVKINSYNL-PLLAEARGKGSAEVSSPAKKTSVLARTEQ------D 663
+LK ++L + +K+ + + + + + +P + E D
Sbjct: 134 RDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 193
Query: 664 DKSDVYDIGIILIEIIVGR-PITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDE 722
K+DV+ +GI LIE+ P N + ++ + + ++ P + S
Sbjct: 194 YKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAK------SEPPTLAQP---SRWSSN 244
Query: 723 SLKRMMELCLRCLSNEPKDRPSVEDTL 749
+ +CL R + L
Sbjct: 245 ----FKDFLKKCLEKNVDARWTTSQLL 267
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 103 bits (258), Expect = 3e-25
Identities = 48/263 (18%), Positives = 101/263 (38%), Gaps = 32/263 (12%)
Query: 492 SHGQIYKGKLT-DGTLVAIRSLK---MSKKSSPHMYTYHIELISKLRHSNLVSALGHCLD 547
G +Y + ++A++ L + K H +E+ S LRH N++ G+ D
Sbjct: 18 KFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD 77
Query: 548 FSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPG 607
+ +YLI EYAP T+ + K + + + + H+
Sbjct: 78 AT-------RVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCHS---KR 126
Query: 608 VFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDDKSD 667
V ++K ++LL +KI + + A + + + + ++ D+K D
Sbjct: 127 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 186
Query: 668 VYDIGIILIEIIVGR-PITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKR 726
++ +G++ E +VG+ P + K + + V+ + ++
Sbjct: 187 LWSLGVLCYEFLVGKPPFEANTYQETYKRISR------------VEFTFPDFVTEG---- 230
Query: 727 MMELCLRCLSNEPKDRPSVEDTL 749
+L R L + P RP + + L
Sbjct: 231 ARDLISRLLKHNPSQRPMLREVL 253
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 103 bits (258), Expect = 3e-25
Identities = 43/272 (15%), Positives = 94/272 (34%), Gaps = 36/272 (13%)
Query: 492 SHGQIYKGKLTD----GTLVAIRSLK-MSKKSSPHMYTYHIELISKLRHSNLVSALGHCL 546
G +++G VAI++ K + S + + + H ++V +G
Sbjct: 19 QFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT 78
Query: 547 DFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVP 606
+ + +++I E LRSF+ Y L I A + + +L +
Sbjct: 79 E--------NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES---K 127
Query: 607 GVFSNNLKITDVLLDENFHVKINSYNL-PLLAEARGKGSAEVSSPAKKTS--VLARTEQD 663
++ +VL+ N VK+ + L + ++ +++ P K + +
Sbjct: 128 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 187
Query: 664 DKSDVYDIGIILIEIIVG--RPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSD 721
SDV+ G+ + EI++ +P ++ + + C
Sbjct: 188 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-----------RLPMPPNCPP 236
Query: 722 ESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
+ L +C + +P RP + L
Sbjct: 237 T----LYSLMTKCWAYDPSRRPRFTELKAQLS 264
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 104 bits (260), Expect = 3e-25
Identities = 46/262 (17%), Positives = 89/262 (33%), Gaps = 24/262 (9%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYH-IELISKLRHSNLVSALGHCLDFS 549
+ ++ + LVAI+ + + I ++ K++H N+V+
Sbjct: 21 AFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGG 80
Query: 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVF 609
+YLI + L I G T ++ V++LH +
Sbjct: 81 -------HLYLIMQLVSGGELFDRIVEKG-FYTERDASRLIFQVLDAVKYLHDLGIVHRD 132
Query: 610 SNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKT-SVLARTEQDDKSDV 668
+ LDE+ + I+ + L + + S +P VLA+ D
Sbjct: 133 LKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDC 192
Query: 669 YDIGIILIEIIVGR-PITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRM 727
+ IG+I ++ G P EN L + +L+ D ++ SD
Sbjct: 193 WSIGVIAYILLCGYPPFYDENDAKLFEQILKAEY--------EFDSPYWDDISDS----A 240
Query: 728 MELCLRCLSNEPKDRPSVEDTL 749
+ + +P+ R + E L
Sbjct: 241 KDFIRHLMEKDPEKRFTCEQAL 262
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 101 bits (253), Expect = 2e-24
Identities = 46/272 (16%), Positives = 88/272 (32%), Gaps = 43/272 (15%)
Query: 492 SHGQIYKGKLT----DGTLVAIRSLKMSKKSSPHMYTY---HIELISKLRHSNLVSALGH 544
S G + +G+ VA++ LK S P + + L H NL+ G
Sbjct: 20 SFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGV 79
Query: 545 CLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGI 604
L + ++ E AP +L + A+ + +G+ +L +
Sbjct: 80 VLTPPM--------KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES-- 129
Query: 605 VPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTS-------VL 657
+L ++LL VKI + L+ V +K L
Sbjct: 130 -KRFIHRDLAARNLLLATRDLVKIG--DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186
Query: 658 ARTEQDDKSDVYDIGIILIEIIVG--RPITSENVVVLVKDLLQVNIGTDEARKSIVDPAV 715
SD + G+ L E+ P N ++ + K
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKID----------KEGERLPR 236
Query: 716 MNECSDESLKRMMELCLRCLSNEPKDRPSVED 747
+C + + + ++C +++P+DRP+
Sbjct: 237 PEDCPQD----IYNVMVQCWAHKPEDRPTFVA 264
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 103 bits (257), Expect = 2e-24
Identities = 40/267 (14%), Positives = 98/267 (36%), Gaps = 35/267 (13%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550
+ G +++ G A + + +S I+ +S LRH LV+ D +
Sbjct: 38 AFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNE 97
Query: 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFS 610
+ +I+E+ L ++ K++ + + + KG+ +H
Sbjct: 98 -------MVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVH 147
Query: 611 NNLKITDVLL--DENFHVKINSYNLPLLAEARGK-----GSAEVSSPAKKTSVLARTEQD 663
+LK +++ + +K+ + L + + G+AE ++P V
Sbjct: 148 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAP----EVAEGKPVG 203
Query: 664 DKSDVYDIGIILIEIIVGR-PITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDE 722
+D++ +G++ ++ G P EN ++++ + D++ S + +
Sbjct: 204 YYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKD----- 258
Query: 723 SLKRMMELCLRCLSNEPKDRPSVEDTL 749
+ L +P R ++ L
Sbjct: 259 -------FIRKLLLADPNTRMTIHQAL 278
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 102 bits (256), Expect = 3e-24
Identities = 41/263 (15%), Positives = 96/263 (36%), Gaps = 27/263 (10%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550
+ G +++ G + + + + I ++++L H L++ D
Sbjct: 41 AFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYE 100
Query: 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFS 610
+ LI E+ L I+ YK++ + I +G++ +H +
Sbjct: 101 -------MVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHE---HSIVH 150
Query: 611 NNLKITDVLLD--ENFHVKINSYNLPLLAEARGKGSAEVSSPAKKT-SVLARTEQDDKSD 667
++K +++ + + VKI + L ++ ++ R +D
Sbjct: 151 LDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTD 210
Query: 668 VYDIGIILIEIIVGR-PITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKR 726
++ IG++ ++ G P E+ + ++++ + + DE S V P
Sbjct: 211 MWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPE------------ 258
Query: 727 MMELCLRCLSNEPKDRPSVEDTL 749
+ L EP+ R +V D L
Sbjct: 259 AKDFIKNLLQKEPRKRLTVHDAL 281
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 101 bits (252), Expect = 4e-24
Identities = 47/262 (17%), Positives = 104/262 (39%), Gaps = 29/262 (11%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550
+ G +Y + G VAIR + + ++ + I ++ + ++ N+V+ L L
Sbjct: 32 ASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVG-- 89
Query: 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFS 610
++++ EY +L ++ + + + ++FLH+ V
Sbjct: 90 -----DELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL--QALEFLHSN---QVIH 139
Query: 611 NNLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKTSVLARTEQ-DDKSDV 668
++K ++LL + VK+ + + + K S V +P + + K D+
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDI 199
Query: 669 YDIGIILIEIIVGR-PITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRM 727
+ +GI+ IE+I G P +EN + + + + +P + S
Sbjct: 200 WSLGIMAIEMIEGEPPYLNENPLRALYLIAT------NGTPELQNP---EKLSAI----F 246
Query: 728 MELCLRCLSNEPKDRPSVEDTL 749
+ RCL + + R S ++ L
Sbjct: 247 RDFLNRCLDMDVEKRGSAKELL 268
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 99.8 bits (248), Expect = 9e-24
Identities = 38/270 (14%), Positives = 101/270 (37%), Gaps = 28/270 (10%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSAL-GHCLDFS 549
+ + A++ + ++ S + L+ +++ + GH
Sbjct: 15 VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQ 74
Query: 550 LDDPSISI--IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPG 607
L D + +L+F+ L +++ L+ + A+++ + LH
Sbjct: 75 LKDTYETNTFFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALHK---LN 130
Query: 608 VFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDD--- 664
+ +LK ++LLD++ ++K+ + + K +P+ + +D
Sbjct: 131 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHP 190
Query: 665 ----KSDVYDIGIILIEIIVGR-PITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNEC 719
+ D++ G+I+ ++ G P +++++ ++ N ++
Sbjct: 191 GYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNY--------QFGSPEWDDY 242
Query: 720 SDESLKRMMELCLRCLSNEPKDRPSVEDTL 749
SD + +L R L +P+ R + E+ L
Sbjct: 243 SDT----VKDLVSRFLVVQPQKRYTAEEAL 268
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 100 bits (250), Expect = 1e-23
Identities = 42/289 (14%), Positives = 96/289 (33%), Gaps = 41/289 (14%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYH-IELISKLRHSNLVSALGHCLDFS 549
+ G ++K G ++A + + + K + ++++ + +V G
Sbjct: 18 NGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG 77
Query: 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVF 609
I + E+ +L + G ++ +IA++KG+ +L +
Sbjct: 78 E-------ISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLRE--KHKIM 127
Query: 610 SNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVY 669
++K +++L++ +K+ + + S + L T +SD++
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIW 187
Query: 670 DIGIILIEIIVGR-PITSENVVVLVKDLLQVNIGTD------------------------ 704
+G+ L+E+ VGR PI + L G
Sbjct: 188 SMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPP 247
Query: 705 ----EARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTL 749
E IV+ S + +CL P +R ++ +
Sbjct: 248 MAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 296
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 99.5 bits (247), Expect = 1e-23
Identities = 44/273 (16%), Positives = 94/273 (34%), Gaps = 34/273 (12%)
Query: 492 SHGQIYKGKLTDGT-----LVAIRSLKMSKKSSPHMYTYH-IELISKLRHSNLVSALGHC 545
G++YKG L + VAI++LK + ++ + H N++ G
Sbjct: 19 EFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVI 78
Query: 546 LDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIV 605
+ + +I EY N L F+ + + +Q + I G+++L
Sbjct: 79 SKYK-------PMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLAN--- 128
Query: 606 PGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLA-----RT 660
+L ++L++ N K++ + L + E + + S A
Sbjct: 129 MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYR 188
Query: 661 EQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECS 720
+ SDV+ GI++ E++ + ++ ++
Sbjct: 189 KFTSASDVWSFGIVMWEVMTYGERPYWEL-------------SNHEVMKAINDGFRLPTP 235
Query: 721 DESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
+ + +L ++C E RP D + L
Sbjct: 236 MDCPSAIYQLMMQCWQQERARRPKFADIVSILD 268
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 100 bits (249), Expect = 2e-23
Identities = 34/263 (12%), Positives = 95/263 (36%), Gaps = 28/263 (10%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550
G +++ + + +K+ + I +++ RH N++
Sbjct: 17 EFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKK-EISILNIARHRNILHLHESFESME- 74
Query: 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFS 610
+ +IFE+ + I+ ++L + ++ + + +QFLH+ +
Sbjct: 75 ------ELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHS---HNIGH 125
Query: 611 NNLKITDVLLD--ENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDD-KSD 667
+++ +++ + +KI + + ++P + + + +D
Sbjct: 126 FDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATD 185
Query: 668 VYDIGIILIEIIVGR-PITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKR 726
++ +G ++ ++ G P +E ++++++ D E S E
Sbjct: 186 MWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEY--------TFDEEAFKEISIE---- 233
Query: 727 MMELCLRCLSNEPKDRPSVEDTL 749
M+ R L E K R + + L
Sbjct: 234 AMDFVDRLLVKERKSRMTASEAL 256
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 98.3 bits (244), Expect = 2e-23
Identities = 46/263 (17%), Positives = 98/263 (37%), Gaps = 29/263 (11%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTY---HIELISKLRHSNLVSALGHCLD 547
+++ + L VA++ L+ P Y + + L H +V+
Sbjct: 19 GMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEA 78
Query: 548 FSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPG 607
+ P+ + Y++ EY TLR + G +T + I + + F H G
Sbjct: 79 ---ETPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQ---NG 131
Query: 608 VFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTS-----VLARTEQ 662
+ ++K ++++ VK+ + + G + ++
Sbjct: 132 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 191
Query: 663 DDKSDVYDIGIILIEIIVGR-PITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSD 721
D +SDVY +G +L E++ G P T ++ V + + R+ + P+ +E
Sbjct: 192 DARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV---------REDPIPPSARHEGLS 242
Query: 722 ESLKRMMELCLRCLSNEPKDRPS 744
L + L+ L+ P++R
Sbjct: 243 ADLD---AVVLKALAKNPENRYQ 262
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 96.8 bits (240), Expect = 1e-22
Identities = 54/298 (18%), Positives = 97/298 (32%), Gaps = 61/298 (20%)
Query: 492 SHGQIYKGKLT------DGTLVAIRSLKMSKKSSPHMYTYH-IELISKLRHSNLVSALGH 544
+ G++++ + T+VA++ LK + L+++ + N+V LG
Sbjct: 25 AFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGV 84
Query: 545 CLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGY-----------------------KL 581
C P + L+FEY L F+ L
Sbjct: 85 CAV---GKP----MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPL 137
Query: 582 TWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKI----NSYNLPLLA 637
+ +++ A + G+ +L +L + L+ EN VKI S N+
Sbjct: 138 SCAEQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSAD 194
Query: 638 EARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGR--PITSENVVVLVKD 695
+ G+ + + +SDV+ G++L EI P
Sbjct: 195 YYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH------ 248
Query: 696 LLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
+E + D ++ C + + L C S P DRPS LQ
Sbjct: 249 --------EEVIYYVRDGNIL-ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQ 297
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.9 bits (238), Expect = 2e-22
Identities = 46/278 (16%), Positives = 86/278 (30%), Gaps = 47/278 (16%)
Query: 492 SHGQIYKGKLTD---GTLVAIRSLKMSKKSSPHMYTYH--IELISKLRHSNLVSALGHCL 546
+ G + KG VA++ LK ++ +L + +V +G C
Sbjct: 19 NFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE 78
Query: 547 DFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVP 606
S L+ E A L ++ + I + G+++L
Sbjct: 79 AESW--------MLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLEE---S 126
Query: 607 GVFSNNLKITDVLLDENFHVKINSYNLPLLAEA---------RGKGSAEVSSPAKKTSVL 657
+L +VLL + KI+ + L A GK + +P +
Sbjct: 127 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP----ECI 182
Query: 658 ARTEQDDKSDVYDIGIILIEIIVG--RPITSENVVVLVKDLLQVNIGTDEARKSIVDPAV 715
+ KSDV+ G+++ E +P + L +
Sbjct: 183 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER-----------MGC 231
Query: 716 MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
C E M +L C + + ++RP L+
Sbjct: 232 PAGCPRE----MYDLMNLCWTYDVENRPGFAAVELRLR 265
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.7 bits (237), Expect = 3e-22
Identities = 46/293 (15%), Positives = 114/293 (38%), Gaps = 26/293 (8%)
Query: 492 SHGQIYKGK--LTDGTLVAIRSLKMSKKSSPHMYTYHIEL-----ISKLRHSNLVSALGH 544
++G+++K + G VA++ +++ + E+ + H N+V
Sbjct: 19 AYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDV 78
Query: 545 CLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGI 604
C D + + L+FE+ + P + +++G+ FLH+
Sbjct: 79 CTVSRTDRETK--LTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS-- 134
Query: 605 VPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQ-D 663
V +LK ++L+ + +K+ + L + + ++ V + + +
Sbjct: 135 -HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYA 193
Query: 664 DKSDVYDIGIILIEIIVGRPI----TSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNEC 719
D++ +G I E+ +P+ + + + + D++ + D R + +
Sbjct: 194 TPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSK 253
Query: 720 SDESLKRMM--------ELCLRCLSNEPKDRPSVEDTLWNLQFATQIQGLKEN 764
S + +++ + +L L+CL+ P R S L + + ++ KEN
Sbjct: 254 SAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL-SHPYFQDLERCKEN 305
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.6 bits (237), Expect = 3e-22
Identities = 61/285 (21%), Positives = 102/285 (35%), Gaps = 48/285 (16%)
Query: 492 SHGQIYKGKLTDGTL---VAIRSLKMSKKSSPHMYTYH-IELISKL-RHSNLVSALGHCL 546
+ GQ+ K ++ L AI+ +K H +E++ KL H N+++ LG C
Sbjct: 22 NFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE 81
Query: 547 DFSLDDPSISIIYLIFEYAPNETLRSFI---------------SGPGYKLTWVQRIAAAI 591
+YL EYAP+ L F+ + L+ Q + A
Sbjct: 82 H-------RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 134
Query: 592 AIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPA 651
+ +G+ +L +L ++L+ EN+ KI + L E K +
Sbjct: 135 DVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVR 191
Query: 652 -KKTSVLARTEQDDKSDVYDIGIILIEIIVGR--PITSENVVVLVKDLLQVNIGTDEARK 708
L + SDV+ G++L EI+ P L + L Q
Sbjct: 192 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG--------- 242
Query: 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
C DE + +L +C +P +RPS L +L
Sbjct: 243 --YRLEKPLNCDDE----VYDLMRQCWREKPYERPSFAQILVSLN 281
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 93.2 bits (231), Expect = 1e-21
Identities = 48/271 (17%), Positives = 90/271 (33%), Gaps = 42/271 (15%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYH-IELISKLRHSNLVSALGHCLDFS 549
++G++ VA++ + M + I + L H N+V GH + +
Sbjct: 17 AYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN 76
Query: 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVF 609
I YL EY L I + ++ GV +LH G+
Sbjct: 77 -------IQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLHG---IGIT 125
Query: 610 SNNLKITDVLLDENFHVKINSYNLPLLAEARGK--------GSAEVSSPAKKTSVLARTE 661
++K ++LLDE ++KI+ + L + + G+ +P +L R E
Sbjct: 126 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP----ELLKRRE 181
Query: 662 QDD-KSDVYDIGIILIEIIVGRPI--TSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNE 718
DV+ GI+L ++ G + D ++ +
Sbjct: 182 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW----------KEKKTYLNPWKK 231
Query: 719 CSDESLKRMMELCLRCLSNEPKDRPSVEDTL 749
+ L + L P R ++ D
Sbjct: 232 IDSA----PLALLHKILVENPSARITIPDIK 258
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 93.2 bits (231), Expect = 2e-21
Identities = 49/271 (18%), Positives = 99/271 (36%), Gaps = 44/271 (16%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLK---MSKKSSPHMYTYHIELISKLRHSNLVSALGHCLD 547
S + + L AI+ L+ + K++ T +++S+L H V D
Sbjct: 20 SFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQD 79
Query: 548 FSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPG 607
+Y YA N L +I G IV +++LH G
Sbjct: 80 D-------EKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHG---KG 128
Query: 608 VFSNNLKITDVLLDENFHVKINSYNLPLLAEARGK--------GSAEVSSPAKKTSVLAR 659
+ +LK ++LL+E+ H++I + + K G+A+ SP +L
Sbjct: 129 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP----ELLTE 184
Query: 660 TEQDDKSDVYDIGIILIEIIVGR-PITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNE 718
SD++ +G I+ +++ G P + N ++ + ++++ E +
Sbjct: 185 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE------------K 232
Query: 719 CSDESLKRMMELCLRCLSNEPKDRPSVEDTL 749
+ +L + L + R E+
Sbjct: 233 FFPK----ARDLVEKLLVLDATKRLGCEEME 259
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 92.6 bits (229), Expect = 4e-21
Identities = 48/286 (16%), Positives = 98/286 (34%), Gaps = 51/286 (17%)
Query: 492 SHGQIYKGKLT------DGTLVAIRSLKMSKKSSPHMYTYH-IELISKLRHSNLVSALGH 544
S G +Y+G T VAI+++ + + + ++ + ++V LG
Sbjct: 32 SFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGV 91
Query: 545 CLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGY---------KLTWVQRIAAAIAIVK 595
S P +I E L+S++ + + I A I
Sbjct: 92 V---SQGQP----TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 144
Query: 596 GVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEA--------RGKGSAEV 647
G+ +L+ +L + ++ E+F VKI + + +G
Sbjct: 145 GMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 201
Query: 648 SSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEAR 707
SP L SDV+ G++L EI + + ++
Sbjct: 202 MSP----ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG------------LSNEQVL 245
Query: 708 KSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
+ +++ ++ + D + EL C PK RPS + + +++
Sbjct: 246 RFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 290
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 88.4 bits (218), Expect = 8e-20
Identities = 56/289 (19%), Positives = 93/289 (32%), Gaps = 48/289 (16%)
Query: 492 SHGQIYKG------KLTDGTLVAIRSLKMSKKSSPHMYTYHIE--LISKLRHSNLVSALG 543
+ GQ+ + K VA++ LK S H LI H N+V+ LG
Sbjct: 25 AFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 84
Query: 544 HCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYK---------------LTWVQRIA 588
C + +I E+ L +++ + LT I
Sbjct: 85 ACTKPG------GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 138
Query: 589 AAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARG----KGS 644
+ + KG++FL + +L ++LL E VKI + L KG
Sbjct: 139 YSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 195
Query: 645 AEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTD 704
A + + +SDV+ G++L EI + D
Sbjct: 196 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG------------VKID 243
Query: 705 EARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
E + D + M + L C EP RP+ + + +L
Sbjct: 244 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 292
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 87.9 bits (217), Expect = 2e-19
Identities = 46/291 (15%), Positives = 94/291 (32%), Gaps = 51/291 (17%)
Query: 492 SHGQIYKGKLT------DGTLVAIRSLKMSKKSSPHMYTYH-IELISKL-RHSNLVSALG 543
+ G++ + VA++ LK S + ++++S L H N+V+ LG
Sbjct: 35 AFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLG 94
Query: 544 HCLDFSLDDPSISIIYLIFEYAPNETLRSFI-----------------SGPGYKLTWVQR 586
C P +I EY L +F+ L
Sbjct: 95 ACTI---GGP----TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 147
Query: 587 IAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKI----NSYNLPLLAEARGK 642
++ + + KG+ FL + +L ++LL KI + ++ + K
Sbjct: 148 LSFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204
Query: 643 GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIG 702
G+A + + +SDV+ GI L E+ +
Sbjct: 205 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG------------MP 252
Query: 703 TDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
D ++ + + M ++ C +P RP+ + + ++
Sbjct: 253 VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 303
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 87.5 bits (216), Expect = 3e-19
Identities = 39/265 (14%), Positives = 95/265 (35%), Gaps = 25/265 (9%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKL-RHSNLVSALGHCLDFS 549
+G++ + A++ L+ +EL + + ++V + +
Sbjct: 24 INGKVLQIFNKRTQEKFALKMLQDCP-----KARREVELHWRASQCPHIVRIVDVYENLY 78
Query: 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYK-LTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
+ ++ E L S I G + T + +I + +Q+LH+ +
Sbjct: 79 AGRKCL---LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INI 132
Query: 609 FSNNLKITDVLLD---ENFHVKINSYNLPLLAEARGKGSAEVSSPAKKT-SVLARTEQDD 664
++K ++L N +K+ + + + +P VL + D
Sbjct: 133 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 192
Query: 665 KSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESL 724
D++ +G+I+ ++ G P N + + ++ I + + +E S+E
Sbjct: 193 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW---SEVSEE-- 247
Query: 725 KRMMELCLRCLSNEPKDRPSVEDTL 749
+ L L EP R ++ + +
Sbjct: 248 --VKMLIRNLLKTEPTQRMTITEFM 270
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.4 bits (213), Expect = 4e-19
Identities = 48/280 (17%), Positives = 101/280 (36%), Gaps = 33/280 (11%)
Query: 492 SHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYH-----IELISKLRHSNLVSALGHC 545
+YK + +VAI+ +K+ +S I+L+ +L H N++
Sbjct: 10 QFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII----GL 65
Query: 546 LDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIV 605
LD +I L+F++ + I LT A + ++G+++LH
Sbjct: 66 LDAFGHKSNI---SLVFDFMETDLEV-IIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ--- 118
Query: 606 PGVFSNNLKITDVLLDENFHVKINSY-NLPLLAEARGKGSAEVSSPAKKTSVLARTEQ-- 662
+ +LK ++LLDEN +K+ + + +V + + L +
Sbjct: 119 HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMY 178
Query: 663 DDKSDVYDIGIILIEIIVGRPI-TSENVVVLVKDLLQVNIGTDEAR----KSIVDPAVMN 717
D++ +G IL E+++ P ++ + + + + E + S+ D
Sbjct: 179 GVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFK 238
Query: 718 ECSDESLKRM--------MELCLRCLSNEPKDRPSVEDTL 749
L + ++L P R + L
Sbjct: 239 SFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQAL 278
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.1 bits (212), Expect = 5e-19
Identities = 51/293 (17%), Positives = 105/293 (35%), Gaps = 56/293 (19%)
Query: 492 SHGQIYKGKLT--------DGTLVAIRSLKMSKKSSPHMYTYH-IELISKL-RHSNLVSA 541
+ GQ+ + T VA++ LK +E++ + +H N+++
Sbjct: 25 AFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINL 84
Query: 542 LGHCLDFSLDDPSISIIYLIFEYAPNETLRSFI---------------SGPGYKLTWVQR 586
LG C +Y+I EYA LR ++ P +L+
Sbjct: 85 LGACTQDG-------PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 137
Query: 587 IAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKI----NSYNLPLLAEARGK 642
++ A + +G+++L + +L +VL+ E+ +KI + ++ + +
Sbjct: 138 VSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 194
Query: 643 GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVG--RPITSENVVVLVKDLLQVN 700
+ + L +SDV+ G++L EI P V L K L + +
Sbjct: 195 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 254
Query: 701 IGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753
+ C++E + + C P RP+ + + +L
Sbjct: 255 R-----------MDKPSNCTNE----LYMMMRDCWHAVPSQRPTFKQLVEDLD 292
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 85.7 bits (211), Expect = 6e-19
Identities = 39/277 (14%), Positives = 98/277 (35%), Gaps = 30/277 (10%)
Query: 492 SHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYH--IELISKLRHSNLVSALGHCLDFS 549
++G +YK + G A++ +++ K+ T I ++ +L+HSN+V
Sbjct: 14 TYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKK 73
Query: 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVF 609
+ L+FE+ + + G L V + + ++ G+ + H V
Sbjct: 74 R-------LVLVFEHLDQDLKKLLDVCEG-GLESVTAKSFLLQLLNGIAYCHD---RRVL 122
Query: 610 SNNLKITDVLLDENFHVKINSYNLPLLAEARGK---GSAEVSSPAKKTSVLARTEQDDKS 666
+LK ++L++ +KI + L + ++ +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTI 182
Query: 667 DVYDIGIILIEIIVGR-PITSENVVVLVKDLLQV-------------NIGTDEARKSIVD 712
D++ +G I E++ G + + + ++ + + ++ +
Sbjct: 183 DIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYE 242
Query: 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTL 749
P + ++L + L +P R + + L
Sbjct: 243 PLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQAL 279
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.0 bits (212), Expect = 9e-19
Identities = 57/301 (18%), Positives = 99/301 (32%), Gaps = 66/301 (21%)
Query: 492 SHGQIYKGKLTD------GTLVAIRSLKMSKKSSPHMYTYH-IELISKL-RHSNLVSALG 543
+ G++ VA++ LK SS ++++++L H N+V+ LG
Sbjct: 49 AFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLG 108
Query: 544 HCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYK----------------------L 581
C P IYLIFEY L +++ K L
Sbjct: 109 ACTL---SGP----IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVL 161
Query: 582 TWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARG 641
T+ + A + KG++FL +L +VL+ VKI + L +
Sbjct: 162 TFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDS 218
Query: 642 K--------GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEII-VGRPITSENVVVL 692
+ +P L KSDV+ GI+L EI +G
Sbjct: 219 NYVVRGNARLPVKWMAP----ESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP------ 268
Query: 693 VKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNL 752
I D ++ + + + + + C + + + RPS + L
Sbjct: 269 -------GIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 321
Query: 753 Q 753
Sbjct: 322 G 322
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 85.2 bits (210), Expect = 1e-18
Identities = 43/277 (15%), Positives = 89/277 (32%), Gaps = 42/277 (15%)
Query: 492 SHGQIYKGKLTD-----GTLVAIRSLKMSKKSSPHMYTYH-IELISKLRHSNLVSALGHC 545
+ G +YKG VAI+ L+ + + +++ + + ++ LG C
Sbjct: 21 AFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGIC 80
Query: 546 LDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIV 605
L ++ LI + P L ++ + + + I KG+ +L
Sbjct: 81 LTSTV--------QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED--- 129
Query: 606 PGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTS-------VLA 658
+ +L +VL+ HVKI + L A+ G E + K +
Sbjct: 130 RRLVHRDLAARNVLVKTPQHVKITDFGL---AKLLGAEEKEYHAEGGKVPIKWMALESIL 186
Query: 659 RTEQDDKSDVYDIGIILIEII-VGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMN 717
+SDV+ G+ + E++ G SI++
Sbjct: 187 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--------------PASEISSILEKGERL 232
Query: 718 ECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754
+ + ++C + RP + +
Sbjct: 233 PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSK 269
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 85.6 bits (211), Expect = 1e-18
Identities = 50/278 (17%), Positives = 105/278 (37%), Gaps = 28/278 (10%)
Query: 492 SHGQIYKGKLTD-GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550
S G +Y+ KL D G LVAI+ + K+ ++++ KL H N+V S
Sbjct: 32 SFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFYS-SG 86
Query: 551 DDPSISIIYLIFEYAPNETLRS--FISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
+ + L+ +Y P R S L + + + + ++H+ G+
Sbjct: 87 EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGI 143
Query: 609 FSNNLKITDVLLD-ENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTS--VLARTEQDDK 665
++K ++LLD + +K+ + + + S + + T+
Sbjct: 144 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSS 203
Query: 666 SDVYDIGIILIEIIVGRPI-TSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESL 724
DV+ G +L E+++G+PI ++ V + ++++V + ++P +
Sbjct: 204 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK 263
Query: 725 KR-------------MMELCLRCLSNEPKDRPSVEDTL 749
+ LC R L P R + +
Sbjct: 264 AHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 85.6 bits (211), Expect = 2e-18
Identities = 40/262 (15%), Positives = 86/262 (32%), Gaps = 31/262 (11%)
Query: 492 SHGQIYKGKLTD-GTLVAIRSLKMSKKSSPHMYTY------HIELISKLRHSNLVSALGH 544
G++Y + D G + A++ L + T + L+S +V
Sbjct: 16 GFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYA 75
Query: 545 CLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGI 604
+ I + L +S G + A I+ G++ +H
Sbjct: 76 FHTPDK-------LSFILDLMNGGDLHYHLSQHGVF-SEADMRFYAAEIILGLEHMHN-- 125
Query: 605 VPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDD 664
V +LK ++LLDE+ HV+I+ L + ++ + VL + D
Sbjct: 126 -RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYD 184
Query: 665 -KSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDES 723
+D + +G +L +++ G ++ ++ ++ + P + +
Sbjct: 185 SSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRS------ 238
Query: 724 LKRMMELCLRCLSNEPKDRPSV 745
L L + R
Sbjct: 239 ------LLEGLLQRDVNRRLGC 254
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 85.8 bits (211), Expect = 2e-18
Identities = 47/196 (23%), Positives = 81/196 (41%), Gaps = 15/196 (7%)
Query: 141 LNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFL 200
L ++N +S P+ I + NL L L+ N+ L+ L L+ L L NN +S
Sbjct: 202 LIATNNQISDITPLGILT--NLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLA 257
Query: 201 PVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLR 260
P L+GL L + L AN +S P + ++ K + L L
Sbjct: 258 P--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLY 315
Query: 261 NNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLL-LQ 319
N + + S +LQ+L + N+ SL +L +I +L N+++ L L
Sbjct: 316 FNNIS---DISPVSSLTKLQRLFFANNKVSDV--SSLANLTNINWLSAGHNQISDLTPLA 370
Query: 320 NMSCNPQLAFVDLSSN 335
N+ ++ + L+
Sbjct: 371 NL---TRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 50.4 bits (119), Expect = 4e-07
Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 95 LAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPV 154
L N +D S + SL+ L+ L + + S+A+ +++ L+ N +S P
Sbjct: 314 LYFNNISD--ISPVSSLTKLQRLFFANNKVSDV--SSLANLTNINWLSAGHNQISDLTP- 368
Query: 155 QISSLRNLQTLILDDN 170
+++L + L L+D
Sbjct: 369 -LANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 43.5 bits (101), Expect = 7e-05
Identities = 43/254 (16%), Positives = 91/254 (35%), Gaps = 26/254 (10%)
Query: 107 TLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLI 166
+ L + L LG+ + G + + ++L +N S+N L+ P + +L L ++
Sbjct: 39 SQTDLDQVTTLQADRLGIKS-IDG-VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDIL 94
Query: 167 LDDNKFTGAVPSELSLLQVL----------------SVLSLKNNSLSGFLPVSLTGLQSL 210
+++N+ P + S +
Sbjct: 95 MNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLT 154
Query: 211 RVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNP 270
+ LS + ++ L NL L D+ N + ++ N + P
Sbjct: 155 SLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITP 214
Query: 271 DELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFV 330
+ L +L ++ N+ I +L SL ++T LD+ N+++ L +S +L +
Sbjct: 215 LGI--LTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLA--PLSGLTKLTEL 268
Query: 331 DLSSNLLTGYLPSC 344
L +N ++ P
Sbjct: 269 KLGANQISNISPLA 282
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 43.5 bits (101), Expect = 8e-05
Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 7/88 (7%)
Query: 157 SSLRNLQTLILDDNKFTGAVP-SELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSL 215
++L +L T V ++L + L L S+ G + L +L ++
Sbjct: 19 TALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG-----VEYLNNLTQINF 73
Query: 216 SANHLSGEIPDLRNLKNLRVFDVQDNYF 243
S N L+ P L+NL L + +N
Sbjct: 74 SNNQLTDITP-LKNLTKLVDILMNNNQI 100
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 84.4 bits (208), Expect = 2e-18
Identities = 50/289 (17%), Positives = 97/289 (33%), Gaps = 43/289 (14%)
Query: 492 SHGQIYKGKLT-DGTLVAIRSLKMSKKSSP----HMYTYHIELISKLRHSNLVSALGHCL 546
S G+++ + AI++LK L H L
Sbjct: 14 SFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQ 73
Query: 547 DFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVP 606
++ + EY L I K + A I+ G+QFLH+
Sbjct: 74 TKE-------NLFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLHS---K 122
Query: 607 GVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGK------GSAEVSSPAKKTSVLART 660
G+ +LK+ ++LLD++ H+KI + + G+ + +P +L
Sbjct: 123 GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAP----EILLGQ 178
Query: 661 EQDDKSDVYDIGIILIEIIVGR-PITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNEC 719
+ + D + G++L E+++G+ P ++ L + N P
Sbjct: 179 KYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDN------------PFYPRWL 226
Query: 720 SDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQGLKENNQEA 768
E +L ++ EP+ R V + +I + +E
Sbjct: 227 EKE----AKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWEELERKEI 271
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 83.0 bits (204), Expect = 5e-18
Identities = 41/288 (14%), Positives = 80/288 (27%), Gaps = 34/288 (11%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550
S G IY G + G VAI+ K+ ++ ++ + + C
Sbjct: 19 SFGDIYLGTDIAAGEEVAIK--LECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEG- 75
Query: 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHT-GIV---- 605
++ E F K + + A ++ ++++H+ +
Sbjct: 76 -----DYNVMVMELLGPSLEDLFNFCSR-KFSLKTVLLLADQMISRIEYIHSKNFIHRDV 129
Query: 606 --------PGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVL 657
G N + I D L + + ++P G+A +S
Sbjct: 130 KPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASIN----TH 185
Query: 658 ARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMN 717
EQ + D+ +G +L+ +G Q E + S +
Sbjct: 186 LGIEQSRRDDLESLGYVLMYFNLGSLPWQGLK---AATKRQKYERISEKKMSTPIEVLCK 242
Query: 718 ECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQGLKENN 765
E C S D+P + QG +
Sbjct: 243 GYPSE----FATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDY 286
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 82.6 bits (203), Expect = 1e-17
Identities = 49/286 (17%), Positives = 109/286 (38%), Gaps = 32/286 (11%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYH--IELISKLRHSNLVSALGHCLDF 548
+ G+++K + G VA++ + M + T I+++ L+H N+V+ + C
Sbjct: 22 TFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTK 81
Query: 549 -SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPG 607
S + IYL+F++ ++ + K T + ++ G+ ++H
Sbjct: 82 ASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV-KFTLSEIKRVMQMLLNGLYYIHR---NK 137
Query: 608 VFSNNLKITDVLLDENFHVKINSYNL-----PLLAEARGKGSAEVSSPAKKTSVLARTEQ 662
+ ++K +VL+ + +K+ + L + + V + + L E+
Sbjct: 138 ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGER 197
Query: 663 --DDKSDVYDIGIILIEIIVGRPI----TSENVVVLVKDLLQV-------NIGTDEARKS 709
D++ G I+ E+ PI T ++ + L+ L N+ E +
Sbjct: 198 DYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEK 257
Query: 710 IVDPAVMNECSDESLKRMM------ELCLRCLSNEPKDRPSVEDTL 749
+ + LK + +L + L +P R +D L
Sbjct: 258 LELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDAL 303
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 82.6 bits (203), Expect = 2e-17
Identities = 45/282 (15%), Positives = 102/282 (36%), Gaps = 32/282 (11%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYH-IELISKLRHSNLVSALGHCLDFS 549
++G + + VAI+ + + + T I+++ + RH N++ +
Sbjct: 20 AYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT 79
Query: 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVF 609
++ + +YL+ + + + L+ I++G++++H+ V
Sbjct: 80 IEQ--MKDVYLVTHLMGADLYKLLKTQH---LSNDHICYFLYQILRGLKYIHS---ANVL 131
Query: 610 SNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLA------RTEQD 663
+LK +++LL+ +KI + L +A+ + ++ A
Sbjct: 132 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 191
Query: 664 DKSDVYDIGIILIEIIVGRP--ITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSD 721
D++ +G IL E++ RP + L L + + E I++ N
Sbjct: 192 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 251
Query: 722 ESLKR--------------MMELCLRCLSNEPKDRPSVEDTL 749
K ++L + L+ P R VE L
Sbjct: 252 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 293
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 80.3 bits (197), Expect = 1e-16
Identities = 44/281 (15%), Positives = 99/281 (35%), Gaps = 34/281 (12%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYH--IELISKLRHSNLVSALGHCLDF 548
++G + G VAI+ L +S + + L+ +RH N++ L
Sbjct: 30 AYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPD 89
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
D + YL+ + + + L + ++KG++++H G+
Sbjct: 90 ETLD-DFTDFYLVMPFMGTDLGKLMKHEK---LGEDRIQFLVYQMLKGLRYIHA---AGI 142
Query: 609 FSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDV 668
+LK ++ ++E+ +KI + L A++ G +L D+
Sbjct: 143 IHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDI 202
Query: 669 YDIGIILIEIIVGRP--------------------ITSENVVVLVKDLLQVNIGTDEARK 708
+ +G I+ E+I G+ +E V L D + + +
Sbjct: 203 WSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELE 262
Query: 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTL 749
+++ S ++ L + L + + R + + L
Sbjct: 263 KKDFASILTNASPLAV----NLLEKMLVLDAEQRVTAGEAL 299
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 79.3 bits (194), Expect = 1e-16
Identities = 44/228 (19%), Positives = 82/228 (35%), Gaps = 2/228 (0%)
Query: 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNK 171
+L L + + G + +L L L +N +S P + L L+ L L N+
Sbjct: 31 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ 90
Query: 172 FTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLK 231
LQ L V + + + L + + + + E + +K
Sbjct: 91 LKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMK 150
Query: 232 NLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVG 291
L + D L + L L N+ ++ L+ N L KL +S N
Sbjct: 151 KLSYIRIADTNITTIPQGLPPSLTELHLDGNKIT-KVDAASLKGLNNLAKLGLSFNSISA 209
Query: 292 PFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTG 339
SL + P + L ++ NKL + ++ + + V L +N ++
Sbjct: 210 VDNGSLANTPHLRELHLNNNKLVK-VPGGLADHKYIQVVYLHNNNISA 256
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 76.6 bits (187), Expect = 8e-16
Identities = 46/252 (18%), Positives = 92/252 (36%), Gaps = 12/252 (4%)
Query: 95 LAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPV 154
L +N T+ +L +L L L++ + PG+ A LE L LS N L
Sbjct: 38 LQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEK 97
Query: 155 QISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVS 214
+L+ L+ + K +V + L+ + V+ L SG + G++ L +
Sbjct: 98 MPKTLQELRVHENEITKVRKSVFNGLNQMIVVE-LGTNPLKSSGIENGAFQGMKKLSYIR 156
Query: 215 LSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVL--RNNRFQFGLNPDE 272
++ +++ IP +L + N K + L + ++
Sbjct: 157 IADTNIT-TIPQ-GLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGS 214
Query: 273 LRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGL------LLQNMSCNPQ 326
L + L++L ++ N + L I + +H N ++ + +
Sbjct: 215 LANTPHLRELHLN-NNKLVKVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKAS 273
Query: 327 LAFVDLSSNLLT 338
+ V L SN +
Sbjct: 274 YSGVSLFSNPVQ 285
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 73.1 bits (178), Expect = 1e-14
Identities = 43/229 (18%), Positives = 77/229 (33%), Gaps = 2/229 (0%)
Query: 135 SSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNN 194
+L+L +N ++ +L+NL TLIL +NK + P + L L L L N
Sbjct: 30 PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKN 89
Query: 195 SLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKM 254
L LQ LRV + + + N + + M
Sbjct: 90 QLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGM 149
Query: 255 VTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLT 314
L + L +L + N+ SL L ++ L + N ++
Sbjct: 150 KKLSYIRIA-DTNITTIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSIS 208
Query: 315 GLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSN 363
+ +++ P L + L++N L + + L N +S
Sbjct: 209 AVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYL-HNNNISA 256
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 64.7 bits (156), Expect = 8e-12
Identities = 54/244 (22%), Positives = 90/244 (36%), Gaps = 8/244 (3%)
Query: 135 SSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNN 194
L ++ S L +P + + L L +NK T + L+ L L L NN
Sbjct: 9 QCHLRVVQCSDLGLE-KVPKDLPP--DTALLDLQNNKITEIKDGDFKNLKNLHTLILINN 65
Query: 195 SLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLR-NLKNLRVFDVQDNYFGPRFPRLHKK 253
+S P + L L + LS N L + L+ LRV + + +
Sbjct: 66 KISKISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQ 125
Query: 254 MVTLVLRNNRFQF-GLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNK 312
M+ + L N + G+ + +L + I+ IP L PS+T L + GNK
Sbjct: 126 MIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNI--TTIPQGL-PPSLTELHLDGNK 182
Query: 313 LTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSNEEQEQHPSN 372
+T + ++ LA + LS N ++ L R + + N L
Sbjct: 183 ITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHK 242
Query: 373 FCQN 376
+ Q
Sbjct: 243 YIQV 246
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.3 bits (192), Expect = 2e-16
Identities = 44/275 (16%), Positives = 101/275 (36%), Gaps = 44/275 (16%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYH------IELISKLRHSNLVSALGH 544
+ K + + G A + +K + S + ++ +++H N+++
Sbjct: 22 QFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEV 81
Query: 545 CLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGI 604
+ + + LI E L F++ LT + I+ GV +LH+
Sbjct: 82 YENKT-------DVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLHS-- 131
Query: 605 VPGVFSNNLKITDVLLDEN----FHVKINSYNLPLLAEARGK-----GSAEVSSPAKKTS 655
+ +LK +++L + +KI + L + + G+ E +P
Sbjct: 132 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP----E 186
Query: 656 VLARTEQDDKSDVYDIGIILIEIIVGR-PITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714
++ ++D++ IG+I ++ G P + + ++ VN ++ S
Sbjct: 187 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSAL 246
Query: 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTL 749
+ R L +PK R +++D+L
Sbjct: 247 AKD------------FIRRLLVKDPKKRMTIQDSL 269
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.1 bits (186), Expect = 1e-15
Identities = 48/281 (17%), Positives = 101/281 (35%), Gaps = 36/281 (12%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDF 548
++G +YK + G +VA++ +++ ++ P I L+ +L H N+V LD
Sbjct: 14 TYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIV----KLLDV 69
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
+ + YL+FE+ + + + + + +++G+ F H+ V
Sbjct: 70 IHTENKL---YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRV 123
Query: 609 FSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLA------RTEQ 662
+LK ++L++ +K+ + L A A G + A
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGL---ARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 663 DDKSDVYDIGIILIEIIVGR-PITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSD 721
D++ +G I E++ R ++ + + + + DE V + S
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 240
Query: 722 ESLKR-------------MMELCLRCLSNEPKDRPSVEDTL 749
R L + L +P R S + L
Sbjct: 241 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 281
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 74.4 bits (182), Expect = 6e-15
Identities = 41/262 (15%), Positives = 91/262 (34%), Gaps = 41/262 (15%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTY---HIELISKLRHSNLVSALGHCLD 547
S G+++ + +G A++ LK + ++S + H ++ G D
Sbjct: 16 SFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQD 75
Query: 548 FSLDDPSISIIYLIFEYAPNETLRSFIS-GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVP 606
I++I +Y L S + + + AA + L
Sbjct: 76 AQ-------QIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVC-----LALEYLHSK 123
Query: 607 GVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGK---GSAEVSSPAKKTSVLARTEQD 663
+ +LK ++LLD+N H+KI + G+ + +P V++ +
Sbjct: 124 DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPE----VVSTKPYN 179
Query: 664 DKSDVYDIGIILIEIIVGR-PITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDE 722
D + GI++ E++ G P N + + +L + +++
Sbjct: 180 KSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILN------------AELRFPPFFNED 227
Query: 723 SLKRMMELCLRCLSNEPKDRPS 744
+ +L R ++ + R
Sbjct: 228 ----VKDLLSRLITRDLSQRLG 245
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 73.7 bits (180), Expect = 7e-15
Identities = 38/291 (13%), Positives = 84/291 (28%), Gaps = 36/291 (12%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550
S G I++G L + VAI+ ++S L + + + L
Sbjct: 17 SFGVIFEGTNLLNNQQVAIK--FEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGL 74
Query: 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHT-GIV---- 605
L+ + +L + G K + AA ++ VQ +H +V
Sbjct: 75 H------NVLVIDLLGP-SLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDI 127
Query: 606 ----------PGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTS 655
+N + + D + + + + ++P + G+A S +
Sbjct: 128 KPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSI----N 183
Query: 656 VLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAV 715
EQ + D+ +G + + + G + Q E ++S +
Sbjct: 184 THLGREQSRRDDLEALGHVFMYFLRGSLPWQ---GLKAATNKQKYERIGEKKQSTPLREL 240
Query: 716 MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQGLKENNQ 766
+E + + P + + E+
Sbjct: 241 CAGFPEE----FYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDEN 287
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.3 bits (179), Expect = 2e-14
Identities = 43/260 (16%), Positives = 91/260 (35%), Gaps = 34/260 (13%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYH---IELISKLRHSNLVSALGHCLD 547
+ G++ + G A++ L+ + + ++ RH L +
Sbjct: 17 TFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT 76
Query: 548 FSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPG 607
+ + EYA L +S T + IV +++LH+
Sbjct: 77 HD-------RLCFVMEYANGGELFFHLS-RERVFTEERARFYGAEIVSALEYLHS---RD 125
Query: 608 VFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTS--VLARTEQDDK 665
V ++K+ +++LD++ H+KI + L + G + + VL +
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRA 185
Query: 666 SDVYDIGIILIEIIVGR-PITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESL 724
D + +G+++ E++ GR P +++ L + +L + S E
Sbjct: 186 VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM------------EEIRFPRTLSPE-- 231
Query: 725 KRMMELCLRCLSNEPKDRPS 744
L L +PK R
Sbjct: 232 --AKSLLAGLLKKDPKQRLG 249
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 71.9 bits (175), Expect = 3e-14
Identities = 46/279 (16%), Positives = 98/279 (35%), Gaps = 32/279 (11%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYH--IELISKLRHSNLVSALGHCLDF 548
++G ++K K +VA++ +++ + I L+ +L+H N+V
Sbjct: 14 TYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD 73
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
+ L+FE+ + + F S G + ++KG+ F H+ V
Sbjct: 74 K-------KLTLVFEFCDQDLKKYFDSCNGDL-DPEIVKSFLFQLLKGLGFCHS---RNV 122
Query: 609 FSNNLKITDVLLDENFHVKINSYNLPLLAEARGK-GSAEVSSPAKKTSVLARTEQ--DDK 665
+LK ++L++ N +K+ ++ L + SAEV + + + +
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTS 182
Query: 666 SDVYDIGIILIEIIVGR--PITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDES 723
D++ G I E+ +V +K + ++ E + + +
Sbjct: 183 IDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMY 242
Query: 724 LKRM-------------MELCLRCLSNEPKDRPSVEDTL 749
+L L P R S E+ L
Sbjct: 243 PATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEAL 281
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 71.8 bits (175), Expect = 4e-14
Identities = 46/286 (16%), Positives = 103/286 (36%), Gaps = 43/286 (15%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLR-HSNLVSALGHCLDFS 549
+ ++++ +T+ V + K+ K I+++ LR N+++
Sbjct: 47 KYSEVFEAINITNNEKVVV---KILKPVKKKKIKREIKILENLRGGPNIITLADIV---- 99
Query: 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVF 609
DP L+FE+ N + LT I+K + + H+ G+
Sbjct: 100 -KDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCHS---MGIM 151
Query: 610 SNNLKITDVLLD-ENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQ--DDKS 666
++K +V++D E+ +++ + L + + V+S K L Q D
Sbjct: 152 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSL 211
Query: 667 DVYDIGIILIEIIVGR-PITSENVVVLVKDLLQVNIGTDEARKSI------VDPAVMNEC 719
D++ +G +L +I + P + + +GT++ I +DP +
Sbjct: 212 DMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDIL 271
Query: 720 SDESLKRM----------------MELCLRCLSNEPKDRPSVEDTL 749
S KR ++ + L + + R + + +
Sbjct: 272 GRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 317
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.0 bits (168), Expect = 2e-13
Identities = 45/272 (16%), Positives = 88/272 (32%), Gaps = 48/272 (17%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYH------IELISKLR--HSNLVSAL 542
G +Y G ++D VAI+ ++ + S + L+ K+ S ++ L
Sbjct: 16 GFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL 75
Query: 543 GHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHT 602
LI E L + +++ V+ H
Sbjct: 76 DWFERPDS-------FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN 128
Query: 603 GIVPGVFSNNLKITDVLLDEN-FHVKINSYNLPLLAEARG----KGSAEVSSPAKKTSVL 657
GV ++K ++L+D N +K+ + L + G+ S P +
Sbjct: 129 ---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE---WIR 182
Query: 658 ARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMN 717
+ V+ +GI+L +++ G + ++ + V +
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQV-------------FFRQRVSS 229
Query: 718 ECSDESLKRMMELCLRCLSNEPKDRPSVEDTL 749
EC L CL+ P DRP+ E+
Sbjct: 230 ECQH--------LIRWCLALRPSDRPTFEEIQ 253
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 66.8 bits (162), Expect = 2e-12
Identities = 49/267 (18%), Positives = 99/267 (37%), Gaps = 36/267 (13%)
Query: 492 SHGQIYKGKLT----DGTLVAIRSLKMSKKSSPHMYTYH----IELISKLRHSNLVSALG 543
++G+++ + G L A++ LK + T H +++ +R S + L
Sbjct: 36 AYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLH 95
Query: 544 HCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTG 603
+ + ++LI +Y L + +S + T + IV ++ LH
Sbjct: 96 YAFQTE------TKLHLILDYINGGELFTHLS-QRERFTEHEVQIYVGEIVLALEHLHK- 147
Query: 604 IVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSS-----PAKKTSVLA 658
G+ ++K+ ++LLD N HV + + L A A A
Sbjct: 148 --LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGG 205
Query: 659 RTEQDDKSDVYDIGIILIEIIVGR-PITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMN 717
+ D D + +G+++ E++ G P T + ++ + + + +P
Sbjct: 206 DSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKS--------EPPYPQ 257
Query: 718 ECSDESLKRMMELCLRCLSNEPKDRPS 744
E S +L R L +PK R
Sbjct: 258 EMSAL----AKDLIQRLLMKDPKKRLG 280
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 66.5 bits (161), Expect = 3e-12
Identities = 43/289 (14%), Positives = 100/289 (34%), Gaps = 39/289 (13%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYH--IELISKLRHSNLVSALGHCLDF 548
+ G + VAI+ L ++ H + + L+ + H N++S L
Sbjct: 29 AQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQ 88
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
+ +YL+ E + +L + ++ G++ LH+ G+
Sbjct: 89 KTLE-EFQDVYLVMELMDANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHS---AGI 140
Query: 609 FSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKK-TSVLARTEQDDKSD 667
+LK +++++ + +KI + L A + V + + V+ + D
Sbjct: 141 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 200
Query: 668 VYDIGIILIEIIVGRPI-----------------------TSENVVVLVKDLLQVNIGTD 704
++ +G I+ E++ + + + + V++ ++
Sbjct: 201 IWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYA 260
Query: 705 EARKSIVDPAVMNECSDESLKRM----MELCLRCLSNEPKDRPSVEDTL 749
+ P + E K +L + L +P R SV+D L
Sbjct: 261 GLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 309
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 66.5 bits (161), Expect = 3e-12
Identities = 42/277 (15%), Positives = 97/277 (35%), Gaps = 26/277 (9%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYH--IELISKLRHSNLVSALGHCLDF 548
++G + G VA++ L +S H + + L+ ++H N++ L
Sbjct: 30 AYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA 89
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
+ + L + + VQ + I +G++++H+ +
Sbjct: 90 --RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL--RGLKYIHS---ADI 142
Query: 609 FSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDV 668
+LK +++ ++E+ +KI + L + G +L + D+
Sbjct: 143 IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 202
Query: 669 YDIGIILIEIIVGRPI--TSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKR 726
+ +G I+ E++ GR + ++++ L L V E K I + N +
Sbjct: 203 WSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMP 262
Query: 727 --------------MMELCLRCLSNEPKDRPSVEDTL 749
++L + L + R + L
Sbjct: 263 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 299
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 65.2 bits (157), Expect = 7e-12
Identities = 74/333 (22%), Positives = 130/333 (39%), Gaps = 38/333 (11%)
Query: 32 QYQTLVRIQQLLNYPSVSSSFNTTTVTDFCNIEPTPSLTLVCYEDNLTQLHIAGDNNNNI 91
Q L++I++ L P+ SS+ TT D CN T L + D +
Sbjct: 7 DKQALLQIKKDLGNPTTLSSWLPTT--DCCN---------------RTWLGVLCDTDTQ- 48
Query: 92 NGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNY-LSG 150
+++L LS ++L P+P S+A+ L L + L G
Sbjct: 49 ----------------TYRVNNLD-LSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVG 91
Query: 151 SIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSL 210
IP I+ L L L + +GA+P LS ++ L L N+LSG LP S++ L +L
Sbjct: 92 PIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNL 151
Query: 211 RVVSLSANHLSGEIPD--LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGL 268
++ N +SG IPD K + N + P + + +R
Sbjct: 152 VGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEG 211
Query: 269 NPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLA 328
+ L ++ + + + + ++ LD+ N++ G L Q ++ L
Sbjct: 212 DASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLH 271
Query: 329 FVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCL 361
+++S N L G +P ++ + CL
Sbjct: 272 SLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCL 304
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 59.0 bits (141), Expect = 7e-10
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 134 HSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKN 193
S +L L+L +N + G++P ++ L+ L +L + N G +P + LQ V + N
Sbjct: 242 LSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNLQRFDVSAYAN 300
Query: 194 NS-LSGF-LP 201
N L G LP
Sbjct: 301 NKCLCGSPLP 310
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 55.9 bits (133), Expect = 7e-09
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Query: 124 LWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVP 177
++G LP + L LN+S N L G IP Q +L+ +NK P
Sbjct: 256 IYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNLQRFDVSAYANNKCLCGSP 308
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 52.8 bits (125), Expect = 6e-08
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 160 RNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANH 219
+NL L L +N+ G +P L+ L+ L L++ N+L G +P LQ V + + N
Sbjct: 244 KNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNLQRFDVSAYANNK 302
Query: 220 LSGEIP 225
P
Sbjct: 303 CLCGSP 308
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 64.1 bits (155), Expect = 2e-11
Identities = 36/257 (14%), Positives = 89/257 (34%), Gaps = 33/257 (12%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTY---HIELISKLRHSNLVSALGHCLD 547
S G++ K G A++ L K + ++ + LV D
Sbjct: 53 SFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD 112
Query: 548 FSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPG 607
S +Y++ EY + S + G + + A IV ++LH+
Sbjct: 113 NS-------NLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHS---LD 161
Query: 608 VFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDDKSD 667
+ +LK ++L+D+ ++++ + + R + + A ++ + D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW-TLCGTPEALAPEIILSKGYNKAVD 220
Query: 668 VYDIGIILIEIIVGR-PITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKR 726
+ +G+++ E+ G P ++ + + + ++ + S +
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVS------------GKVRFPSHFSSD---- 264
Query: 727 MMELCLRCLSNEPKDRP 743
+ +L L + R
Sbjct: 265 LKDLLRNLLQVDLTKRF 281
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.8 bits (143), Expect = 2e-10
Identities = 58/283 (20%), Positives = 97/283 (34%), Gaps = 9/283 (3%)
Query: 61 CNIEPTPSLTLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLV 120
C P +T C + L + G + L N + ++ + +L +L L
Sbjct: 6 CVCYNEPKVTTSCPQQGLQAV-PVGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLH 64
Query: 121 SLGLWGPLPGSIAHSSSLEILNLSSNYLSGSI-PVQISSLRNLQTLILDDNKFTGAVPSE 179
S L + + LE L+LS N S+ P L L TL LD P
Sbjct: 65 SNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGL 124
Query: 180 LSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDV 238
L L L L++N+L + L +L + L N +S R L +L +
Sbjct: 125 FRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLL 184
Query: 239 QDNYFGPRFPRLHKKMVTLVLRNNRF--QFGLNPDELRSYNQLQKLDISLNRFVGPFIPS 296
N P + + L+ L + L LQ L ++ N +V +
Sbjct: 185 HQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCD-CRA 243
Query: 297 LLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTG 339
+ +++ L Q ++ L++N L G
Sbjct: 244 RPLWAWLQKFRGSSSEVPCSLPQRLA---GRDLKRLAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.4 bits (116), Expect = 6e-07
Identities = 33/184 (17%), Positives = 54/184 (29%), Gaps = 3/184 (1%)
Query: 60 FCNIEPTPSLTLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSL 119
F + +L L + L N T L +L L L
Sbjct: 101 FHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFL 160
Query: 120 VSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSE 179
+ + SL+ L L N ++ P L L TL L N +
Sbjct: 161 HGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEA 220
Query: 180 LSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQ 239
L+ L+ L L L +N + L+ S++ + +P L + +
Sbjct: 221 LAPLRALQYLRLNDNPWVCDCR-ARPLWAWLQKFRGSSSEVPCSLPQ--RLAGRDLKRLA 277
Query: 240 DNYF 243
N
Sbjct: 278 ANDL 281
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 55.5 bits (133), Expect = 6e-10
Identities = 32/123 (26%), Positives = 46/123 (37%), Gaps = 6/123 (4%)
Query: 188 VLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRF 247
VL L + L+ L L + + LS N L P L L+ L V DN
Sbjct: 2 VLHLAHKDLTV--LCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVD 59
Query: 248 PRLHKKMV-TLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVG--PFIPSLLS-LPSI 303
+ + L+L NNR Q L S +L L++ N L LPS+
Sbjct: 60 GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSV 119
Query: 304 TYL 306
+ +
Sbjct: 120 SSI 122
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 52.8 bits (126), Expect = 6e-09
Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 3/107 (2%)
Query: 211 RVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNP 270
RV+ L+ L+ + L L + D+ N P L + L + N
Sbjct: 1 RVLHLAHKDLT-VLCHLEQLLLVTHLDLSHNRLRALPPALAA-LRCLEVLQASDNALENV 58
Query: 271 DELRSYNQLQKLDISLNRFVG-PFIPSLLSLPSITYLDIHGNKLTGL 316
D + + +LQ+L + NR I L+S P + L++ GN L
Sbjct: 59 DGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQE 105
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 35.8 bits (82), Expect = 0.004
Identities = 25/124 (20%), Positives = 44/124 (35%), Gaps = 13/124 (10%)
Query: 68 SLTLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGP 127
LT++C+ + L + ++N + L +L L+VL L
Sbjct: 9 DLTVLCHLEQLLLVTHLDLSHNRLRA----------LPPALAALRCLEVLQASDNALENV 58
Query: 128 LPGSIAHSSSLEILNLSSNYLSGSIPVQ-ISSLRNLQTLILDDNKFTGAVPSELSLLQVL 186
+ + L L +N L S +Q + S L L L N + L ++L
Sbjct: 59 DGVANLPRL--QELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEML 116
Query: 187 SVLS 190
+S
Sbjct: 117 PSVS 120
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 57.0 bits (136), Expect = 4e-09
Identities = 27/206 (13%), Positives = 73/206 (35%), Gaps = 17/206 (8%)
Query: 492 SHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLD--- 547
++ K + + T VA++ ++ K + I+L+ ++ ++ +
Sbjct: 25 HFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAED-EIKLLQRVNDADNTKEDSMGANHIL 83
Query: 548 -----FSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHT 602
F+ P+ + ++FE L + + + ++ G+ ++H
Sbjct: 84 KLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR 143
Query: 603 GIVPGVFSNNLKITDVLLD-ENFHVKINSYNLPLLAEARGKGSAEVSSPAKK----TSVL 657
G+ ++K +VL++ + + + L A +S + VL
Sbjct: 144 R--CGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVL 201
Query: 658 ARTEQDDKSDVYDIGIILIEIIVGRP 683
+D++ ++ E+I G
Sbjct: 202 LGAPWGCGADIWSTACLIFELITGDF 227
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.7 bits (130), Expect = 1e-08
Identities = 40/209 (19%), Positives = 61/209 (29%), Gaps = 8/209 (3%)
Query: 107 TLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLI 166
+ ++S ++ L LP + IL+LS N L + L L
Sbjct: 5 EVSKVASHLEVNCDKRNLTA-LPPDL--PKDTTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 167 LDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD 226
LD + T L VL L L +N L + T + S +
Sbjct: 62 LDRAELTKLQVDG--TLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGA 119
Query: 227 LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRF--QFGLNPDELRSYNQLQKLDI 284
LR L L+ ++ N P L L + L L L L +
Sbjct: 120 LRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLL 179
Query: 285 SLNRFVGPFIPSLLSLPSITYLDIHGNKL 313
N + + +HGN
Sbjct: 180 QENSLY-TIPKGFFGSHLLPFAFLHGNPW 207
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.3 bits (129), Expect = 1e-08
Identities = 40/206 (19%), Positives = 73/206 (35%), Gaps = 6/206 (2%)
Query: 131 SIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLS 190
++ +S +N L+ ++P + ++ L L +N + L L+ L+
Sbjct: 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 191 LKNNSLSGFLP-VSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPR 249
L L+ +L L +L + L L L L V + R
Sbjct: 62 LDRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALR 121
Query: 250 LHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIH 309
++ L L+ N + L P L +L+KL ++ N L L ++ L +
Sbjct: 122 GLGELQELYLKGNELKT-LPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQ 180
Query: 310 GNKLTGLLLQNMSCNPQLAFVDLSSN 335
N L + + + L F L N
Sbjct: 181 ENSLYT-IPKGFFGSHLLPFAFLHGN 205
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 52.9 bits (125), Expect = 7e-08
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 9/79 (11%)
Query: 134 HSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKN 193
SLE LN+S+N L +P + L+ LI N VP L+ L ++
Sbjct: 282 LPPSLEELNVSNNKLI-ELP---ALPPRLERLIASFNHLA-EVPELPQNLK---QLHVEY 333
Query: 194 NSLSGFLPVSLTGLQSLRV 212
N L P ++ LR+
Sbjct: 334 NPLRE-FPDIPESVEDLRM 351
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 51.4 bits (121), Expect = 2e-07
Identities = 22/95 (23%), Positives = 39/95 (41%), Gaps = 10/95 (10%)
Query: 142 NLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLP 201
N S I +L+ L + +NK +P+ L+ L N L+ +P
Sbjct: 266 LYYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPALPPRLERLI---ASFNHLAE-VP 320
Query: 202 VSLTGLQSLRVVSLSANHLSGEIPDL-RNLKNLRV 235
L+ L + N L E PD+ ++++LR+
Sbjct: 321 ELPQNLKQL---HVEYNPLR-EFPDIPESVEDLRM 351
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 39.0 bits (89), Expect = 0.002
Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
Query: 136 SSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNS 195
L L++ LS S+P +L++L+ N T +P L+ L V + +
Sbjct: 38 RQAHELELNNLGLS-SLP---ELPPHLESLVASCNSLT-ELPELPQSLKSLLVDNNNLKA 92
Query: 196 LSGFLP 201
LS P
Sbjct: 93 LSDLPP 98
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 37.9 bits (86), Expect = 0.004
Identities = 14/70 (20%), Positives = 23/70 (32%), Gaps = 9/70 (12%)
Query: 247 FPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYL 306
L + L + NN+ P L++L S N +P L ++ L
Sbjct: 279 LCDLPPSLEELNVSNNKLIEL--PALPPR---LERLIASFNHLAE--VPELP--QNLKQL 329
Query: 307 DIHGNKLTGL 316
+ N L
Sbjct: 330 HVEYNPLREF 339
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.9 bits (122), Expect = 2e-07
Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 5/93 (5%)
Query: 135 SSSLEILNLSSNYLSGSIPVQI-SSLRNLQTLILDDNKFTG----AVPSELSLLQVLSVL 189
S ++ L++ LS + ++ L+ Q + LDD T + S L + L+ L
Sbjct: 1 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAEL 60
Query: 190 SLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSG 222
+L++N L + + L
Sbjct: 61 NLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQN 93
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.1 bits (120), Expect = 4e-07
Identities = 25/105 (23%), Positives = 41/105 (39%), Gaps = 13/105 (12%)
Query: 123 GLWGPLPGSIAHSSSLEILNLSSNYLSG----SIPVQISSLRNLQTLILDDNKFTGAVPS 178
G+ G S L +L L+ +S S+ + + +L+ L L +N A
Sbjct: 356 GVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGIL 415
Query: 179 ELS-----LLQVLSVLSLKNNSLSGFLPVSLTGLQ----SLRVVS 214
+L +L L L + S + L L+ SLRV+S
Sbjct: 416 QLVESVRQPGCLLEQLVLYDIYWSEEMEDRLQALEKDKPSLRVIS 460
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.5 bits (108), Expect = 9e-06
Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 13/92 (14%)
Query: 112 SSLKVLSLVSLGL----WGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISS-----LRNL 162
S L+VL L + L ++ + SL L+LS+N L + +Q+ L
Sbjct: 369 SVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLL 428
Query: 163 QTLILDDNKFTGAVPSELSLLQV----LSVLS 190
+ L+L D ++ + L L+ L V+S
Sbjct: 429 EQLVLYDIYWSEEMEDRLQALEKDKPSLRVIS 460
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.0 bits (104), Expect = 2e-05
Identities = 22/103 (21%), Positives = 32/103 (31%), Gaps = 5/103 (4%)
Query: 279 LQKLDISLNRFVGPFIPSLLS-LPSITYLDIHGNKLTG----LLLQNMSCNPQLAFVDLS 333
+Q LDI LL L + + LT + + NP LA ++L
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 334 SNLLTGYLPSCLQVEAKTRLVLYSKNCLSNEEQEQHPSNFCQN 376
SN L C+ +T K L N +
Sbjct: 64 SNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSS 106
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.0 bits (99), Expect = 1e-04
Identities = 19/105 (18%), Positives = 32/105 (30%), Gaps = 20/105 (19%)
Query: 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGL----WGPLPGSI 132
++ L I S + L L +V+ L GL + ++
Sbjct: 3 DIQSLDIQC-----------EELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSAL 51
Query: 133 AHSSSLEILNLSSNYLSGSIPVQISSL-----RNLQTLILDDNKF 172
+ +L LNL SN L + +Q L L +
Sbjct: 52 RVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCL 96
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.5 bits (95), Expect = 3e-04
Identities = 15/66 (22%), Positives = 23/66 (34%), Gaps = 6/66 (9%)
Query: 186 LSVLSLKNNSLSGF-LPVSLTGLQSLRVVSLSANHLSGEIPD-----LRNLKNLRVFDVQ 239
+ L ++ LS L LQ +VV L L+ LR L +++
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 240 DNYFGP 245
N G
Sbjct: 64 SNELGD 69
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.2 bits (89), Expect = 0.002
Identities = 17/75 (22%), Positives = 24/75 (32%), Gaps = 10/75 (13%)
Query: 186 LSVLSLKNNSLSG----FLPVSLTGLQSLRVVSLSANHLSGEIPDL------RNLKNLRV 235
L VL L + +S L +L SLR + LS N L + L
Sbjct: 371 LRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQ 430
Query: 236 FDVQDNYFGPRFPRL 250
+ D Y+
Sbjct: 431 LVLYDIYWSEEMEDR 445
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.2 bits (89), Expect = 0.002
Identities = 14/83 (16%), Positives = 30/83 (36%), Gaps = 9/83 (10%)
Query: 273 LRSYNQLQKLDISLNRF----VGPFIPSLLSLPSITYLDIHGNKLTG----LLLQNMSCN 324
+ + L+ L ++ +LL+ S+ LD+ N L L++++
Sbjct: 365 GQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQP 424
Query: 325 P-QLAFVDLSSNLLTGYLPSCLQ 346
L + L + + LQ
Sbjct: 425 GCLLEQLVLYDIYWSEEMEDRLQ 447
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.2 bits (89), Expect = 0.002
Identities = 12/93 (12%), Positives = 24/93 (25%), Gaps = 10/93 (10%)
Query: 117 LSLVSLGLWG------PLPGSIAHSSSLEILNLSSNYLSG----SIPVQISSLRNLQTLI 166
L + SL + + +++ L L+ I + L L
Sbjct: 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELN 61
Query: 167 LDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGF 199
L N+ + ++ SL
Sbjct: 62 LRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNC 94
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.0 bits (86), Expect = 0.004
Identities = 10/89 (11%), Positives = 31/89 (34%), Gaps = 9/89 (10%)
Query: 256 TLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRF----VGPFIPSLLSLPSITYLDIHGN 311
+L ++ + L Q Q + + +L P++ L++ N
Sbjct: 6 SLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSN 65
Query: 312 KLTGLLLQNM-----SCNPQLAFVDLSSN 335
+L + + + + + ++ + L +
Sbjct: 66 ELGDVGVHCVLQGLQTPSCKIQKLSLQNC 94
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.3 bits (116), Expect = 7e-07
Identities = 42/247 (17%), Positives = 82/247 (33%), Gaps = 18/247 (7%)
Query: 113 SLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSG-SIPVQISSLRNLQTLILDDNK 171
+ + PL + ++ ++LS++ + ++ +S LQ L L+ +
Sbjct: 24 GVIAFRCPRSFMDQPLAEHFS-PFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLR 82
Query: 172 FTGAVPSELSLLQVLSVLSLK--NNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRN 229
+ + + L+ L L+L + L L+ L ++LS E
Sbjct: 83 LSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVA 142
Query: 230 LKNLRVFDVQDNYFG----------PRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQL 279
+ ++ Q N G R +V L L ++ E N L
Sbjct: 143 VAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYL 202
Query: 280 QKLDISLNRFVGPFIPSLLS-LPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLT 338
Q L +S + P L +P++ L + G G L P L ++ + T
Sbjct: 203 QHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHL---QINCSHFT 259
Query: 339 GYLPSCL 345
+
Sbjct: 260 TIARPTI 266
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.4 bits (111), Expect = 3e-06
Identities = 20/128 (15%), Positives = 41/128 (32%), Gaps = 4/128 (3%)
Query: 141 LNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSG-F 199
L+L+ L + ++ S + + + + S + + + L N+ +
Sbjct: 5 LDLTGKNLHPDVTGRLLS-QGVIAFRCPRSFMDQPLAEHFSPFR-VQHMDLSNSVIEVST 62
Query: 200 LPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLV 258
L L+ L+ +SL LS I + L NL ++ F
Sbjct: 63 LHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSR 122
Query: 259 LRNNRFQF 266
L +
Sbjct: 123 LDELNLSW 130
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.9 bits (89), Expect = 0.001
Identities = 18/122 (14%), Positives = 44/122 (36%), Gaps = 1/122 (0%)
Query: 256 TLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLS-LPSITYLDIHGNKLT 314
+ R R E S ++Q +D+S + + +LS + L + G +L+
Sbjct: 25 VIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLS 84
Query: 315 GLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSNEEQEQHPSNFC 374
++ ++ N L ++LS + + +RL + + + ++
Sbjct: 85 DPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVA 144
Query: 375 QN 376
Sbjct: 145 HV 146
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 47.7 bits (112), Expect = 1e-06
Identities = 31/194 (15%), Positives = 70/194 (36%), Gaps = 13/194 (6%)
Query: 141 LNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFL 200
NL ++ ++ + L ++ +I +++ + L ++ L L N L+
Sbjct: 29 DNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSVQG--IQYLPNVTKLFLNGNKLTDIK 84
Query: 201 PVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLR 260
P++ L++L + L N + K + + ++ +L L
Sbjct: 85 PLA--NLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLG 142
Query: 261 NNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQN 320
NN+ L + L D ++ I L L + L + N ++ L+
Sbjct: 143 NNKITDITVLSRLTKLDTLSLEDNQIS-----DIVPLAGLTKLQNLYLSKNHISD--LRA 195
Query: 321 MSCNPQLAFVDLSS 334
++ L ++L S
Sbjct: 196 LAGLKNLDVLELFS 209
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 45.2 bits (106), Expect = 7e-06
Identities = 14/138 (10%), Positives = 35/138 (25%), Gaps = 6/138 (4%)
Query: 492 SHGQIYKGKLTDGTLVAIRSLKMSKKSSPHM-YTYHIELISKLRHSNLVSALGHCLDFSL 550
++ ++ K+ S + + + + L
Sbjct: 12 KESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL 71
Query: 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFS 610
++ +Y A L ++ + I + V + G+
Sbjct: 72 QGLAVPKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMIL--EEVAKFYH---RGIVH 126
Query: 611 NNLKITDVLLDENFHVKI 628
+L +VL+ E I
Sbjct: 127 GDLSQYNVLVSEEGIWII 144
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.7 bits (97), Expect = 7e-05
Identities = 23/154 (14%), Positives = 49/154 (31%), Gaps = 16/154 (10%)
Query: 142 NLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLP 201
L + + + +S + LD +L + VL+ +++ + L
Sbjct: 3 ELKPEQVE-QLKLIMSKRYDGSQQALDLKGLR--SDPDLVAQNIDVVLNRRSSMAA-TLR 58
Query: 202 VSLTGLQSLRVVSLSANHLSGEIP---DLRNLKNLRVFDVQDNYF---GPRFPRLHKKMV 255
+ + L ++LS N L ++ NL++ ++ N K+
Sbjct: 59 IIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLE 118
Query: 256 TLVLRNNRFQFGLNPDE------LRSYNQLQKLD 283
L L N + +L +LD
Sbjct: 119 ELWLDGNSLSDTFRDQSTYISAIRERFPKLLRLD 152
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 42.3 bits (98), Expect = 8e-05
Identities = 32/215 (14%), Positives = 75/215 (34%), Gaps = 25/215 (11%)
Query: 136 SSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNS 195
++ + + ++ ++ + L + TL T + L L L LK+N
Sbjct: 19 ANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVTTI--EGVQYLNNLIGLELKDNQ 74
Query: 196 LSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMV 255
++ P+ + +S + I L+++K L + Q P + +++
Sbjct: 75 ITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVL 134
Query: 256 -----------------TLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLL 298
L + + L + ++L L N+ I L
Sbjct: 135 YLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISD--ISPLA 192
Query: 299 SLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLS 333
SLP++ + + N+++ + ++ L V L+
Sbjct: 193 SLPNLIEVHLKNNQISD--VSPLANTSNLFIVTLT 225
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 40.4 bits (93), Expect = 4e-04
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 132 IAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL 191
+A+ S L L N +S P ++SL NL + L +N+ + P L+ L +++L
Sbjct: 169 LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTL 224
Query: 192 KN 193
N
Sbjct: 225 TN 226
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 39.2 bits (90), Expect = 0.001
Identities = 31/203 (15%), Positives = 63/203 (31%), Gaps = 25/203 (12%)
Query: 158 SLRNLQTLILDDNKFTGAVP-SELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLS 216
+L N + + T V ++L + LS ++ G + L +L + L
Sbjct: 17 ALANAIKIAAGKSNVTDTVTQADLDGITTLSAFGTGVTTIEG-----VQYLNNLIGLELK 71
Query: 217 ANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSY 276
N ++ P K + + + + TL L + + L +
Sbjct: 72 DNQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNL 131
Query: 277 NQLQKLDISLNRFVG-----------------PFIPSLLSLPSITYLDIHGNKLTGLLLQ 319
L + + L +L +T L NK++ +
Sbjct: 132 QVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDI--S 189
Query: 320 NMSCNPQLAFVDLSSNLLTGYLP 342
++ P L V L +N ++ P
Sbjct: 190 PLASLPNLIEVHLKNNQISDVSP 212
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 38.9 bits (89), Expect = 0.001
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Query: 186 LSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQD 240
L+ L +N +S P L L +L V L N +S + L N NL + + +
Sbjct: 175 LTTLKADDNKISDISP--LASLPNLIEVHLKNNQISD-VSPLANTSNLFIVTLTN 226
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 199 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 40.0 bits (92), Expect = 4e-04
Identities = 30/178 (16%), Positives = 60/178 (33%), Gaps = 23/178 (12%)
Query: 157 SSLRNLQTLILDDNKFTGAVP-SELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSL 215
++L +L T V ++L + L L S+ G + L +L ++
Sbjct: 15 TALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG-----VEYLNNLTQINF 69
Query: 216 SANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRS 275
S N L+ P K + + + + L L NN+ L +
Sbjct: 70 SNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTN 129
Query: 276 YNQLQKLDISLNRFVGPF-----------------IPSLLSLPSITYLDIHGNKLTGL 316
N+L+ +++ + L +L ++ LDI NK++ +
Sbjct: 130 LNRLELSSNTISDISALSGLTSLQQLNFSSNQVTDLKPLANLTTLERLDISSNKVSDI 187
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 39.9 bits (91), Expect = 0.001
Identities = 16/88 (18%), Positives = 33/88 (37%), Gaps = 5/88 (5%)
Query: 113 SLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSG----SIPVQISSLRNLQTLILD 168
SLK+ ++ + + + S++ + LS N + + I+S ++L+
Sbjct: 9 SLKLDAITTEDE-KSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFS 67
Query: 169 DNKFTGAVPSELSLLQVLSVLSLKNNSL 196
D L++L LK L
Sbjct: 68 DIFTGRVKDEIPEALRLLLQALLKCPKL 95
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 39.1 bits (89), Expect = 0.002
Identities = 11/65 (16%), Positives = 23/65 (35%), Gaps = 5/65 (7%)
Query: 134 HSSSLEILNLSSNYLSGSIPVQISS-----LRNLQTLILDDNKFTGAVPSELSLLQVLSV 188
+ L+ L L N + + + + +L L L+ N+F+ + +V S
Sbjct: 271 ENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDVVDEIREVFST 330
Query: 189 LSLKN 193
Sbjct: 331 RGRGE 335
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 198 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Score = 38.9 bits (89), Expect = 0.001
Identities = 30/149 (20%), Positives = 59/149 (39%), Gaps = 9/149 (6%)
Query: 189 LSLKNNSLSGFLPV------SLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNY 242
+ L G +P +L+ L++ + ++LS N++ +I L ++NLR+ + N
Sbjct: 23 TEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIE-KISSLSGMENLRILSLGRNL 81
Query: 243 FGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVG-PFIPSLLSLP 301
+ L TL + + + L+ L +S N+ I L +L
Sbjct: 82 I-KKIENLDAVADTLEELWISYNQIASLSGIEKLVNLRVLYMSNNKITNWGEIDKLAALD 140
Query: 302 SITYLDIHGNKLTGLLLQNMSCNPQLAFV 330
+ L + GN L +N + + V
Sbjct: 141 KLEDLLLAGNPLYNDYKENNATSEYRIEV 169
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 769 | |||
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.97 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.92 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.91 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.9 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.9 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.89 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.89 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.88 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.88 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.86 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.76 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.76 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.76 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.76 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.74 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.74 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.71 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.7 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.7 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 99.7 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.7 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 99.59 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.56 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.52 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.47 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 99.47 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.47 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 99.46 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 99.39 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 99.38 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 99.36 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 99.34 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.32 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.28 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.28 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.24 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.51 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.32 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.31 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 97.98 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 97.5 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 97.34 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 97.27 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 97.2 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 96.58 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 96.39 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 96.33 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 95.93 |
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-51 Score=421.25 Aligned_cols=252 Identities=19% Similarity=0.308 Sum_probs=211.9
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc---CCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS---KKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|+..+.||+|+||+||+|+.+ +|+.||||++... .....+.+.+|++++++++|||||++++++.+.+
T Consensus 6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~------ 79 (263)
T d2j4za1 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT------ 79 (263)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS------
T ss_pred hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECC------
Confidence 46888999999999999999976 6999999998643 2344677999999999999999999999998643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++|||||++|+|.+++.+.+ .+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+|+
T Consensus 80 -~~~ivmEy~~~g~L~~~l~~~~-~l~e~~~~~i~~qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~~kl~DFG~a~ 154 (263)
T d2j4za1 80 -RVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV 154 (263)
T ss_dssp -EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCSCS
T ss_pred -EEEEEEeecCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeeeeeccccceecCCCCEeecccceee
Confidence 4899999999999999998544 699999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccc
Q 004195 636 LAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAV 715 (769)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 715 (769)
...........++..|++||.+.+..++.++|||||||++|||+||++||...........+.. . ++.+
T Consensus 155 ~~~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~---~--------~~~~ 223 (263)
T d2j4za1 155 HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR---V--------EFTF 223 (263)
T ss_dssp CCCCCCCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT---T--------CCCC
T ss_pred ecCCCcccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHc---C--------CCCC
Confidence 7655544455567788999999988999999999999999999999999986554332221111 0 1111
Q ss_pred cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 716 MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 716 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
....++ ++.+++.+||+.||++|||++|+++|+|+...
T Consensus 224 p~~~s~----~~~~li~~~L~~dp~~R~t~~eil~hp~~~~~ 261 (263)
T d2j4za1 224 PDFVTE----GARDLISRLLKHNPSQRPMLREVLEHPWITAN 261 (263)
T ss_dssp CTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHTCHHHHHH
T ss_pred CccCCH----HHHHHHHHHccCCHhHCcCHHHHHcCcCcCCc
Confidence 222333 48899999999999999999999999999764
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-51 Score=421.92 Aligned_cols=258 Identities=19% Similarity=0.225 Sum_probs=204.3
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
.++|+..+.||+|+||+||+|+.. +|+.||||+++.... ...+.+.+|++++++++|||||++++++.+.+
T Consensus 4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~------- 76 (271)
T d1nvra_ 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN------- 76 (271)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETT-------
T ss_pred CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCc-------
Confidence 357888999999999999999975 799999999975532 23467999999999999999999999998744
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..|+|||||++|+|.+++.... .+++.++..++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+|+.
T Consensus 77 ~~~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~i~~qi~~al~ylH~~---~IiHrDiKp~NILl~~~~~~KL~DFG~a~~ 152 (271)
T d1nvra_ 77 IQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATV 152 (271)
T ss_dssp EEEEEEECCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eeEEEEeccCCCcHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHc---CCccCcccHHHEEECCCCCEEEccchhhee
Confidence 4899999999999999998654 799999999999999999999999 999999999999999999999999999976
Q ss_pred hhccC----CcceeecCCCcchhhhccCCC-CCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccccccc
Q 004195 637 AEARG----KGSAEVSSPAKKTSVLARTEQ-DDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIV 711 (769)
Q Consensus 637 ~~~~~----~~~~~~~~~~~~pe~~~~~~~-~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (769)
..... .....++..|++||.+.+..+ +.++||||+||++|||+||++||..................
T Consensus 153 ~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~-------- 224 (271)
T d1nvra_ 153 FRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT-------- 224 (271)
T ss_dssp CEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCT--------
T ss_pred eccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCC--------
Confidence 53322 223345667889999887776 67899999999999999999999654321111100000000
Q ss_pred CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 712 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
........+ .++.+++.+||+.||++|||++|+++|+||.+..+
T Consensus 225 ~~~~~~~~s----~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~l~ 268 (271)
T d1nvra_ 225 YLNPWKKID----SAPLALLHKILVENPSARITIPDIKKDRWYNKPLK 268 (271)
T ss_dssp TSTTGGGSC----HHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred CCCccccCC----HHHHHHHHHHcCCChhHCcCHHHHhcCHhhCcCCC
Confidence 000011223 34789999999999999999999999999975443
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-50 Score=419.84 Aligned_cols=252 Identities=17% Similarity=0.265 Sum_probs=209.2
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
++|+..+.||+|+||+||+|+.. +|+.||||+++.......+.+.+|++++++++|||||++++++.+.+ ..
T Consensus 20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~-------~~ 92 (293)
T d1yhwa1 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD-------EL 92 (293)
T ss_dssp TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-------EE
T ss_pred cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECC-------EE
Confidence 46999999999999999999965 79999999998766666778999999999999999999999998744 48
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
|+|||||++|+|.+++.+. .+++.++..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+|+...
T Consensus 93 ~ivmEy~~gg~L~~~~~~~--~l~~~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~ 167 (293)
T d1yhwa1 93 WVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167 (293)
T ss_dssp EEEEECCTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEEecCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCcHHHeEECCCCcEeeccchhheeec
Confidence 9999999999999988754 589999999999999999999999 99999999999999999999999999997654
Q ss_pred ccC--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccccccccccccCccc
Q 004195 639 ARG--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTDEARKSIVDPAV 715 (769)
Q Consensus 639 ~~~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~ 715 (769)
... .....++..|++||.+.+..|+.++||||+||++|||+||++||.+..... ......... .+...
T Consensus 168 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~---------~~~~~ 238 (293)
T d1yhwa1 168 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT---------PELQN 238 (293)
T ss_dssp STTCCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCS---------CCCSS
T ss_pred cccccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCC---------CCCCC
Confidence 322 233345667889999998899999999999999999999999997644322 222111110 01111
Q ss_pred cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 716 MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 716 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
...++ ..+.+++.+||+.||++|||++|+++|+|+..
T Consensus 239 ~~~~s----~~~~~li~~~L~~dP~~R~s~~eil~Hp~~~~ 275 (293)
T d1yhwa1 239 PEKLS----AIFRDFLNRCLDMDVEKRGSAKELLQHQFLKI 275 (293)
T ss_dssp GGGSC----HHHHHHHHHHTCSSTTTSCCHHHHTTCGGGGG
T ss_pred cccCC----HHHHHHHHHHccCChhHCcCHHHHhcCHhhCC
Confidence 12233 34889999999999999999999999999963
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-50 Score=413.62 Aligned_cols=253 Identities=17% Similarity=0.284 Sum_probs=200.4
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
++|+..+.||+|+||+||+|++.+++.||||+++.. ....++|.+|++++++++|||||+++|+|.+.+. .+
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~-------~~ 76 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP-------IC 76 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSS-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS-------CE
T ss_pred HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCC-cCcHHHHHHHHHHHHhcCCCCcccccceeccCCc-------eE
Confidence 357778999999999999999988899999999754 3456789999999999999999999999986443 79
Q ss_pred EEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhc
Q 004195 560 LIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEA 639 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~ 639 (769)
+|||||++|+|.+++......++|..+.+|+.|||+||+|||+. +|+||||||+|||+|+++.+||+|||+++....
T Consensus 77 lv~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~ 153 (263)
T d1sm2a_ 77 LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 153 (263)
T ss_dssp EEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCTTCSGGGEEECGGGCEEECSCC-------
T ss_pred EEEEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhcc---ceeecccchhheeecCCCCeEecccchheeccC
Confidence 99999999999999987666899999999999999999999998 999999999999999999999999999976543
Q ss_pred cCC---cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhC-CCCCCCchhHHHHhhhhhccccccccccccCccc
Q 004195 640 RGK---GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVG-RPITSENVVVLVKDLLQVNIGTDEARKSIVDPAV 715 (769)
Q Consensus 640 ~~~---~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 715 (769)
... ....++..|++||.+.+..|+.|+|||||||++|||+|+ ++|+.......+...+.... .+..
T Consensus 154 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~----------~~~~ 223 (263)
T d1sm2a_ 154 DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF----------RLYK 223 (263)
T ss_dssp -----------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTC----------CCCC
T ss_pred CCceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcC----------CCCC
Confidence 322 123345678899999999999999999999999999995 66665544333322222110 1111
Q ss_pred cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 716 MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 716 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
...+++ ++.+++.+||+.||++||||+||+++++.+.+
T Consensus 224 p~~~~~----~l~~li~~cl~~~p~~Rps~~~il~~L~~i~e 261 (263)
T d1sm2a_ 224 PRLAST----HVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 261 (263)
T ss_dssp CTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccccCH----HHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence 122333 48899999999999999999999999987644
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=3.2e-50 Score=420.48 Aligned_cols=264 Identities=19% Similarity=0.333 Sum_probs=200.8
Q ss_pred cCHHHHHHHhcCC---------CCcCccccCCceeEEEEEeC-CC---cEEEEEEccccCC-CChhHHHHHHHHHhhccC
Q 004195 470 FTLDELKEATDCF---------DSSSFMCDASHGQIYKGKLT-DG---TLVAIRSLKMSKK-SSPHMYTYHIELISKLRH 535 (769)
Q Consensus 470 ~~~~el~~~t~~f---------~~~~~iG~G~~g~Vy~~~~~-~g---~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H 535 (769)
+|++|+.+++.+| +..+.||+|+||+||+|+++ +| ..||||++..... ...++|.+|+++|++++|
T Consensus 7 ~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H 86 (299)
T d1jpaa_ 7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH 86 (299)
T ss_dssp GGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCC
T ss_pred CCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCC
Confidence 4556666665544 44578999999999999975 33 3689999875422 223579999999999999
Q ss_pred CceeeEeeeeeccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccc
Q 004195 536 SNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKI 615 (769)
Q Consensus 536 ~nIv~l~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp 615 (769)
||||+++|+|.+.+. .++|||||++|+|.+++......++|.++.+|+.|||+||+|||+. +|+||||||
T Consensus 87 pnIv~l~g~~~~~~~-------~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHrDlKp 156 (299)
T d1jpaa_ 87 PNVIHLEGVVTKSTP-------VMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADM---NYVHRDLAA 156 (299)
T ss_dssp TTBCCEEEEECSSSS-------CEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCG
T ss_pred CCCccEEEEEeeCCE-------EEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhC---CCccCcccc
Confidence 999999999976443 7999999999999999987666799999999999999999999998 999999999
Q ss_pred cceeeCCCceeeecCCCCchhhhccCCcc-------eeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCC
Q 004195 616 TDVLLDENFHVKINSYNLPLLAEARGKGS-------AEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSE 687 (769)
Q Consensus 616 ~NILld~~~~~kl~DFGla~~~~~~~~~~-------~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~ 687 (769)
+|||++.++++||+|||+|+......... ..++..|++||.+.+..++.++|||||||++|||+| |++||.+
T Consensus 157 ~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~ 236 (299)
T d1jpaa_ 157 RNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD 236 (299)
T ss_dssp GGEEECTTCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred ceEEECCCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCC
Confidence 99999999999999999997664332111 122345788999988999999999999999999998 8999876
Q ss_pred chhHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 688 NVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.....+...+.... .+.....+++ .+.+++.+||+.||++||||+||++++....+
T Consensus 237 ~~~~~~~~~i~~~~----------~~~~~~~~~~----~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~ 292 (299)
T d1jpaa_ 237 MTNQDVINAIEQDY----------RLPPPMDCPS----ALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR 292 (299)
T ss_dssp CCHHHHHHHHHTTC----------CCCCCTTCCH----HHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCC----------CCCCCccchH----HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 55433333222111 1111223344 48899999999999999999999999976543
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-50 Score=429.13 Aligned_cols=265 Identities=15% Similarity=0.234 Sum_probs=209.1
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC-ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS-SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
.++|+..+.||+|+||+||+|+.. +|+.||||+++..... ..+.+.+|+.+|++++|||||+++++|.+.+
T Consensus 5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~------- 77 (322)
T d1s9ja_ 5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG------- 77 (322)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSS-------
T ss_pred ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC-------
Confidence 568999999999999999999975 7999999999765332 2467899999999999999999999998643
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhccccc-CCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHT-GIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
+.++|||||++|+|.+++.+.+ .+++..+..++.|+++||+|||+ + +|+||||||+|||+++++++||+|||+|+
T Consensus 78 ~~~iVmEy~~gg~L~~~l~~~~-~l~~~~~~~~~~qil~aL~yLH~~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~ 153 (322)
T d1s9ja_ 78 EISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSG 153 (322)
T ss_dssp EEEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHHH---CCCCSCCSGGGEEECTTCCEEECCCCCCH
T ss_pred EEEEEEEcCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHHhC---CEEccccCHHHeeECCCCCEEEeeCCCcc
Confidence 4899999999999999998554 69999999999999999999996 5 89999999999999999999999999998
Q ss_pred hhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcc-ccccc--------
Q 004195 636 LAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNI-GTDEA-------- 706 (769)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~-~~~~~-------- 706 (769)
...........++..|++||.+.+..|+.++||||+||++|||+||+.||................ +....
T Consensus 154 ~~~~~~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (322)
T d1s9ja_ 154 QLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTP 233 (322)
T ss_dssp HHHHHTC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC------------------
T ss_pred ccCCCccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccc
Confidence 776555555667788999999999999999999999999999999999997543221111100000 00000
Q ss_pred --------------------cccc---cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 707 --------------------RKSI---VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 707 --------------------~~~~---~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
...+ ..+.... ...+.++.+++.+||+.||++|||++|+++|+|+...
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~~ 304 (322)
T d1s9ja_ 234 GRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPS---GVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 304 (322)
T ss_dssp ------------CCCCHHHHHHHHHTSCCCCCCB---TTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHH
T ss_pred cccccccccccccchhHHHHHhhhhccCCccCcc---ccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCcC
Confidence 0000 0000000 1123458899999999999999999999999999754
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-50 Score=418.72 Aligned_cols=254 Identities=17% Similarity=0.250 Sum_probs=206.1
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
+.|+..+.||+|+||+||+|+.. +|+.||||+++.......+.+.+|++++++++|||||++++++.+.+ ..
T Consensus 12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~-------~~ 84 (288)
T d2jfla1 12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN-------NL 84 (288)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETT-------EE
T ss_pred cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC-------eE
Confidence 46788899999999999999975 79999999998665555678999999999999999999999998643 48
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
++|||||++|+|.+++.+....+++.++..++.||++||+|||++ +|+||||||+|||++.++++||+|||+|+...
T Consensus 85 ~lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~---~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~ 161 (288)
T d2jfla1 85 WILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNT 161 (288)
T ss_dssp EEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECH
T ss_pred EEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEEEeecChhheeECCCCCEEEEechhhhccC
Confidence 999999999999999875445799999999999999999999999 99999999999999999999999999986543
Q ss_pred cc--CCcceeecCCCcchhhhc-----cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccccccccccc
Q 004195 639 AR--GKGSAEVSSPAKKTSVLA-----RTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTDEARKSI 710 (769)
Q Consensus 639 ~~--~~~~~~~~~~~~~pe~~~-----~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~ 710 (769)
.. ......++..|++||.+. ...|+.++|||||||++|||+||++||.+..... ...+..... ...
T Consensus 162 ~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~------~~~ 235 (288)
T d2jfla1 162 RTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEP------PTL 235 (288)
T ss_dssp HHHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCC------CCC
T ss_pred CCcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC------CCC
Confidence 22 122344566788999873 4568999999999999999999999997643322 222211100 000
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 711 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.....++ .++.+++.+||+.||++|||++|+++|+|+..
T Consensus 236 ---~~~~~~s----~~~~~li~~~L~~dp~~R~t~~ell~hp~~~~ 274 (288)
T d2jfla1 236 ---AQPSRWS----SNFKDFLKKCLEKNVDARWTTSQLLQHPFVTV 274 (288)
T ss_dssp ---SSGGGSC----HHHHHHHHHHSCSSTTTSCCHHHHTTSGGGCC
T ss_pred ---CccccCC----HHHHHHHHHHccCChhHCcCHHHHhcCcccCC
Confidence 0011233 34889999999999999999999999999864
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-49 Score=409.73 Aligned_cols=255 Identities=20% Similarity=0.301 Sum_probs=200.3
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCC--CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKK--SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|+..+.||+|+||+||+|+++ ..||||+++.... ...+.|.+|++++++++|||||+++|++.+. .
T Consensus 8 ~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~~--------~ 77 (276)
T d1uwha_ 8 GQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP--------Q 77 (276)
T ss_dssp TCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECSS--------S
T ss_pred ccEEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEecc--------E
Confidence 46888899999999999999875 3599999975532 2346799999999999999999999998642 2
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.++|||||++|+|.+++......++|..+..|+.|||+||+|||+. +||||||||+|||++.++.+||+|||+|+..
T Consensus 78 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~---~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~ 154 (276)
T d1uwha_ 78 LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVK 154 (276)
T ss_dssp CEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTSSEEECCCCCSCC-
T ss_pred EEEEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcC---CEeccccCHHHEEEcCCCCEEEccccceeec
Confidence 6999999999999999986656799999999999999999999998 9999999999999999999999999999765
Q ss_pred hccC----CcceeecCCCcchhhhcc---CCCCCCCCeeehhHHHHHHHhCCCCCCCchh-HHHHhhhhhcccccccccc
Q 004195 638 EARG----KGSAEVSSPAKKTSVLAR---TEQDDKSDVYDIGIILIEIIVGRPITSENVV-VLVKDLLQVNIGTDEARKS 709 (769)
Q Consensus 638 ~~~~----~~~~~~~~~~~~pe~~~~---~~~~~ksDVwS~Gvil~elltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~ 709 (769)
.... .....++..|++||.+.. ..|+.++|||||||++|||+||+.||.+... ......+......+ .
T Consensus 155 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p-~--- 230 (276)
T d1uwha_ 155 SRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP-D--- 230 (276)
T ss_dssp -----------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCC-C---
T ss_pred cccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCC-c---
Confidence 4322 122344567889998753 3589999999999999999999999976432 22222222111100 0
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 710 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.+.....+++ ++.+++.+||+.||++|||++||+++++...+
T Consensus 231 --~~~~~~~~~~----~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~ 272 (276)
T d1uwha_ 231 --LSKVRSNCPK----AMKRLMAECLKKKRDERPLFPQILASIELLAR 272 (276)
T ss_dssp --GGGSCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --chhccccchH----HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 0112233444 48899999999999999999999999987754
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-50 Score=414.20 Aligned_cols=255 Identities=20% Similarity=0.256 Sum_probs=196.2
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
++|+..+.||+|+||+||+|+.. +|+.||||+++...... .+.+.+|++++++++|||||++++++.+.. ..
T Consensus 4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~-----~~ 78 (269)
T d2java1 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRT-----NT 78 (269)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC---------
T ss_pred hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCC-----CC
Confidence 57889999999999999999975 79999999997654322 356889999999999999999999987532 22
Q ss_pred eEEEEEeccCCCchhhhhcC---CCCCCCHHHHHHHHHHHHHHhcccccCC--CCCccccCccccceeeCCCceeeecCC
Q 004195 557 IIYLIFEYAPNETLRSFISG---PGYKLTWVQRIAAAIAIVKGVQFLHTGI--VPGVFSNNLKITDVLLDENFHVKINSY 631 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~ivHrDlKp~NILld~~~~~kl~DF 631 (769)
.+|+|||||++|+|.+++.+ ....+++..++.++.|++.||+|||+.. ..+|+||||||+|||++.++.+||+||
T Consensus 79 ~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DF 158 (269)
T d2java1 79 TLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDF 158 (269)
T ss_dssp CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCH
T ss_pred EEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeec
Confidence 37999999999999999862 2347999999999999999999999851 124999999999999999999999999
Q ss_pred CCchhhhccCC--cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccccc
Q 004195 632 NLPLLAEARGK--GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKS 709 (769)
Q Consensus 632 Gla~~~~~~~~--~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (769)
|+|+....... ....++..|++||.+.+..|+.++|||||||++|||+||++||...........+... .
T Consensus 159 G~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~-----~--- 230 (269)
T d2java1 159 GLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG-----K--- 230 (269)
T ss_dssp HHHHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT-----C---
T ss_pred cceeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcC-----C---
Confidence 99987644322 2344566789999998889999999999999999999999999765443332222110 0
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 710 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
.+.+...+++ ++.+++.+||+.||++|||++|+++|+|
T Consensus 231 --~~~~~~~~s~----~l~~li~~~L~~dp~~Rps~~ell~hp~ 268 (269)
T d2java1 231 --FRRIPYRYSD----ELNEIITRMLNLKDYHRPSVEEILENPL 268 (269)
T ss_dssp --CCCCCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred --CCCCCcccCH----HHHHHHHHHcCCChhHCcCHHHHHhCCc
Confidence 0112223444 4889999999999999999999999998
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-49 Score=409.16 Aligned_cols=254 Identities=20% Similarity=0.243 Sum_probs=200.9
Q ss_pred CCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 483 DSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 483 ~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
...+.||+|+||+||+|+.. +++.||+|++...... ..+.+.+|++++++++|||||+++++|.+... ....++
T Consensus 12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~---~~~~~~ 88 (270)
T d1t4ha_ 12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVK---GKKCIV 88 (270)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESS---SCEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccc---cCCEEE
Confidence 34567999999999999976 6899999999765322 23568999999999999999999999875332 234589
Q ss_pred EEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeC-CCceeeecCCCCchhhh
Q 004195 560 LIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD-ENFHVKINSYNLPLLAE 638 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld-~~~~~kl~DFGla~~~~ 638 (769)
+|||||++|+|.+++.+.. .+++..+..++.||++||+|||++ .++|+||||||+|||++ +++.+||+|||+|+...
T Consensus 89 ivmE~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~gl~yLH~~-~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~ 166 (270)
T d1t4ha_ 89 LVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 166 (270)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred EEEeCCCCCcHHHHHhccc-cccHHHHHHHHHHHHHHHHHHHHC-CCCEEeCCcChhhceeeCCCCCEEEeecCcceecc
Confidence 9999999999999997543 689999999999999999999997 12399999999999996 57999999999998765
Q ss_pred ccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCch-hHHHHhhhhhccccccccccccCccccC
Q 004195 639 ARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENV-VVLVKDLLQVNIGTDEARKSIVDPAVMN 717 (769)
Q Consensus 639 ~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 717 (769)
........++..|++||.+. ..++.++|||||||++|||+||+.||.+.. .......+.... ..+.+..
T Consensus 167 ~~~~~~~~GT~~Y~aPE~~~-~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~---------~~~~~~~ 236 (270)
T d1t4ha_ 167 ASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGV---------KPASFDK 236 (270)
T ss_dssp TTSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTC---------CCGGGGG
T ss_pred CCccCCcccCccccCHHHhC-CCCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCC---------CCcccCc
Confidence 44444455667888999875 569999999999999999999999997533 222212111110 0111122
Q ss_pred CCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 718 ECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 718 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
..+++ +.+++.+||+.||++|||++|+++|+||.
T Consensus 237 ~~~~~----~~~li~~~l~~dp~~R~s~~ell~Hp~fk 270 (270)
T d1t4ha_ 237 VAIPE----VKEIIEGCIRQNKDERYSIKDLLNHAFFQ 270 (270)
T ss_dssp CCCHH----HHHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred cCCHH----HHHHHHHHccCCHhHCcCHHHHhCCcccC
Confidence 23333 88999999999999999999999999973
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.2e-49 Score=400.08 Aligned_cols=249 Identities=17% Similarity=0.258 Sum_probs=207.0
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
++|+..+.||+|+||+||+|++++++.||||+++... ...++|.+|++++++++|||||+++|+|.+.+. .+
T Consensus 4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~-~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~-------~~ 75 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRP-------IF 75 (258)
T ss_dssp CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSS-SCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSS-------EE
T ss_pred HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCc-CCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCc-------eE
Confidence 5788899999999999999999888899999998653 356789999999999999999999999986443 89
Q ss_pred EEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhc
Q 004195 560 LIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEA 639 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~ 639 (769)
+||||+++|+|.+++......+++..+.+++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 76 iv~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~---~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~ 152 (258)
T d1k2pa_ 76 IITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 152 (258)
T ss_dssp EEEECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TBCCSCCSGGGEEECTTCCEEECCCSSCCBCSS
T ss_pred EEEEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhc---CcccccccceeEEEcCCCcEEECcchhheeccC
Confidence 99999999999999886666799999999999999999999998 999999999999999999999999999976543
Q ss_pred cCCc---ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCccc
Q 004195 640 RGKG---SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAV 715 (769)
Q Consensus 640 ~~~~---~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 715 (769)
.... ...++..|++||.+....++.|+|||||||++|||+| |+.||.......+...+.... .+..
T Consensus 153 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~----------~~~~ 222 (258)
T d1k2pa_ 153 DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL----------RLYR 222 (258)
T ss_dssp SSCCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTC----------CCCC
T ss_pred CCceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCC----------CCCC
Confidence 3221 1233445788999988999999999999999999998 799998655443333222110 1111
Q ss_pred cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 716 MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 716 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
...+++ ++.+++.+||+.||++|||++||++|+.
T Consensus 223 p~~~~~----~l~~li~~cl~~dP~~RPt~~eil~~L~ 256 (258)
T d1k2pa_ 223 PHLASE----KVYTIMYSCWHEKADERPTFKILLSNIL 256 (258)
T ss_dssp CTTCCH----HHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred cccccH----HHHHHHHHHccCCHhHCcCHHHHHHHhh
Confidence 123333 4889999999999999999999999984
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=3.2e-49 Score=410.42 Aligned_cols=251 Identities=21% Similarity=0.307 Sum_probs=204.4
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
++|+..+.||+|+||+||+|++. +|+.||||+++.. ....++|.+|++++++++|||||+++|+|.+.+. .
T Consensus 17 ~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~-------~ 88 (287)
T d1opja_ 17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP-------F 88 (287)
T ss_dssp GGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTT-CSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS-------C
T ss_pred HHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCc-cchHHHHHHHHHHHHhCCCCCEecCCccEeeCCe-------e
Confidence 46777899999999999999976 6899999999754 3456789999999999999999999999986443 7
Q ss_pred EEEEeccCCCchhhhhc-CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 559 YLIFEYAPNETLRSFIS-GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
++|||||++|+|.+++. .....++|..+..|+.||++||+|||+. +|+||||||+|||+++++.+||+|||+|+..
T Consensus 89 ~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~---~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~ 165 (287)
T d1opja_ 89 YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 165 (287)
T ss_dssp EEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCCTTTC
T ss_pred EEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHC---CcccCccccCeEEECCCCcEEEccccceeec
Confidence 99999999999999986 3445799999999999999999999998 9999999999999999999999999999876
Q ss_pred hccCC---cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCC-CCCchhHHHHhhhhhccccccccccccCc
Q 004195 638 EARGK---GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPI-TSENVVVLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 638 ~~~~~---~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
..... ....++..|++||.+.+..|+.|+|||||||++|||+||..| +.......+...+... ..+
T Consensus 166 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~----------~~~ 235 (287)
T d1opja_ 166 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD----------YRM 235 (287)
T ss_dssp CSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT----------CCC
T ss_pred CCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcC----------CCC
Confidence 44322 222345567899999899999999999999999999997655 4443333333322211 112
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
.....+++ ++.+++.+||+.||++|||++||++.+...
T Consensus 236 ~~~~~~~~----~l~~li~~cl~~dP~~Rps~~ei~~~L~~~ 273 (287)
T d1opja_ 236 ERPEGCPE----KVYELMRACWQWNPSDRPSFAEIHQAFETM 273 (287)
T ss_dssp CCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred CCCccchH----HHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 22223444 489999999999999999999999887654
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.7e-49 Score=406.35 Aligned_cols=248 Identities=24% Similarity=0.373 Sum_probs=199.9
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
++|+..+.||+|+||+||+|++++++.||||+++.. ....++|.+|++++++++|||||+++|+|.+.. .+
T Consensus 13 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~--------~~ 83 (272)
T d1qpca_ 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP--------IY 83 (272)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--------CE
T ss_pred HHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccC-cCCHHHHHHHHHHHHhCCCCCEeEEEeeeccCC--------eE
Confidence 457778999999999999999988899999999754 345678999999999999999999999886422 68
Q ss_pred EEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 560 LIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
+|||||++|+|.+++... ...++|..+.+|+.||++||+|||+. +|+||||||+|||+++++.+||+|||+|+...
T Consensus 84 iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~---~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~ 160 (272)
T d1qpca_ 84 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIE 160 (272)
T ss_dssp EEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccchhheeeecccceeeccccceEEcc
Confidence 999999999999988633 23589999999999999999999998 99999999999999999999999999997664
Q ss_pred ccC---CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCC-CCCCCchhHHHHhhhhhccccccccccccCcc
Q 004195 639 ARG---KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGR-PITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 639 ~~~---~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
... .....++..|++||.+....++.++|||||||++|||+||. +|+...........+... ..+.
T Consensus 161 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~----------~~~~ 230 (272)
T d1qpca_ 161 DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG----------YRMV 230 (272)
T ss_dssp SSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT----------CCCC
T ss_pred CCccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhc----------CCCC
Confidence 332 22233455788999998889999999999999999999965 555443332222222111 1122
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
....+++ ++.+++.+||+.||++||||+||++.|+
T Consensus 231 ~p~~~~~----~l~~li~~cl~~~P~~Rpt~~ei~~~L~ 265 (272)
T d1qpca_ 231 RPDNCPE----ELYQLMRLCWKERPEDRPTFDYLRSVLE 265 (272)
T ss_dssp CCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CcccChH----HHHHHHHHHcCCCHhHCcCHHHHHHHhh
Confidence 2223444 4889999999999999999999999654
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=9.2e-49 Score=410.42 Aligned_cols=255 Identities=19% Similarity=0.275 Sum_probs=195.2
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
.+.|+..+.||+|+||+||+|+.. +|+.||||++..... ...+.+.+|++++++++|||||++++++.+.+
T Consensus 8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~------- 80 (307)
T d1a06a_ 8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGG------- 80 (307)
T ss_dssp GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSS-------
T ss_pred ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC-------
Confidence 466889999999999999999976 699999999975532 23456889999999999999999999998643
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceee---CCCceeeecCCCC
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLL---DENFHVKINSYNL 633 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl---d~~~~~kl~DFGl 633 (769)
..|+|||||++|+|.+++...+ .+++..+..++.||+.||+|||+. +|+||||||+|||+ ++++.+||+|||+
T Consensus 81 ~~~lvmE~~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~ 156 (307)
T d1a06a_ 81 HLYLIMQLVSGGELFDRIVEKG-FYTERDASRLIFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDFGL 156 (307)
T ss_dssp EEEEEECCCCSCBHHHHHHTCS-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCC--
T ss_pred EEEEEEeccCCCcHHHhhhccc-CCCHHHHHHHHHHHHHHHHhhhhc---eeeeEEecccceeecccCCCceEEEeccce
Confidence 4899999999999999998654 699999999999999999999999 99999999999999 4578999999999
Q ss_pred chhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHh-hhhhcccccccccccc
Q 004195 634 PLLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKD-LLQVNIGTDEARKSIV 711 (769)
Q Consensus 634 a~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 711 (769)
|+....... ....++..|++||.+.+..|+.++|||||||++|||+||++||.+........ +...... .
T Consensus 157 a~~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~--------~ 228 (307)
T d1a06a_ 157 SKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYE--------F 228 (307)
T ss_dssp ----------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCC--------C
T ss_pred eEEccCCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCC--------C
Confidence 976654332 33456678899999998899999999999999999999999997654433222 2211110 1
Q ss_pred CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 712 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
++......++ ++.+++.+||+.||++|||++|+++|+|+..
T Consensus 229 ~~~~~~~~s~----~~~~li~~~L~~dP~~R~s~~eil~hp~~~~ 269 (307)
T d1a06a_ 229 DSPYWDDISD----SAKDFIRHLMEKDPEKRFTCEQALQHPWIAG 269 (307)
T ss_dssp CTTTTTTSCH----HHHHHHHHHSCSSGGGSCCHHHHHHSTTTTS
T ss_pred CCccccCCCH----HHHHHHHHHccCCHhHCcCHHHHhcCHhhCC
Confidence 1111223343 4899999999999999999999999999864
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8e-49 Score=406.38 Aligned_cols=249 Identities=16% Similarity=0.229 Sum_probs=199.1
Q ss_pred CCCCcC-ccccCCceeEEEEEeC---CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 481 CFDSSS-FMCDASHGQIYKGKLT---DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 481 ~f~~~~-~iG~G~~g~Vy~~~~~---~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
+|...+ .||+|+||+||+|.++ ++..||||+++.... ...++|.+|+++|++++|||||+++|+|.+.
T Consensus 9 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~------- 81 (285)
T d1u59a_ 9 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE------- 81 (285)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESS-------
T ss_pred CeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeeccC-------
Confidence 455556 4999999999999864 355799999975432 2246799999999999999999999998642
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++|||||++|+|.+++......+++..+.+++.||++||+|||+. +|+||||||+|||++.++.+||+|||+|+
T Consensus 82 -~~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGla~ 157 (285)
T d1u59a_ 82 -ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSK 157 (285)
T ss_dssp -SEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCE
T ss_pred -eEEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCcCchhheeeccCCceeeccchhhh
Confidence 27999999999999999876656899999999999999999999998 99999999999999999999999999997
Q ss_pred hhhccCC-----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhcccccccccc
Q 004195 636 LAEARGK-----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKS 709 (769)
Q Consensus 636 ~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (769)
....... ....++..|++||.+....++.++|||||||++|||+| |++||.+.....+...+...
T Consensus 158 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~--------- 228 (285)
T d1u59a_ 158 ALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQG--------- 228 (285)
T ss_dssp ECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTT---------
T ss_pred cccccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcC---------
Confidence 6543221 12233456789999988899999999999999999998 89999765433332222211
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 710 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
..+.....+++ ++.+++.+||+.||++||||.+|++.+..
T Consensus 229 -~~~~~p~~~~~----~l~~li~~cl~~~p~~RPs~~~i~~~L~~ 268 (285)
T d1u59a_ 229 -KRMECPPECPP----ELYALMSDCWIYKWEDRPDFLTVEQRMRA 268 (285)
T ss_dssp -CCCCCCTTCCH----HHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred -CCCCCCCcCCH----HHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 11222233444 48899999999999999999999776653
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=4.3e-49 Score=420.40 Aligned_cols=257 Identities=15% Similarity=0.213 Sum_probs=210.9
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
.++|+..+.||+|+||.||+|+.. +|+.||||+++.......+.+.+|++++++++|||||++++++.+.+ .
T Consensus 28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~-------~ 100 (352)
T d1koba_ 28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKY-------E 100 (352)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSS-------E
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC-------E
Confidence 357899999999999999999975 79999999997654444567889999999999999999999998643 4
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeC--CCceeeecCCCCch
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD--ENFHVKINSYNLPL 635 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld--~~~~~kl~DFGla~ 635 (769)
.|+|||||++|+|.+++...+..+++.++..|+.||+.||+|||+. +|+||||||+|||++ .++.+||+|||+|+
T Consensus 101 ~~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHRDiKp~NILl~~~~~~~vkL~DFGla~ 177 (352)
T d1koba_ 101 MVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLAT 177 (352)
T ss_dssp EEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCE
T ss_pred EEEEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccccccccccccCCCeEEEeecccce
Confidence 8999999999999998876666799999999999999999999999 999999999999997 57899999999997
Q ss_pred hhhccCCc-ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHH-HhhhhhccccccccccccCc
Q 004195 636 LAEARGKG-SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLV-KDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 636 ~~~~~~~~-~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~ 713 (769)
........ ...++..|++||.+.+..|+.++||||+||++|||+||++||.+...... ..+...... +.+
T Consensus 178 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~--------~~~ 249 (352)
T d1koba_ 178 KLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWE--------FDE 249 (352)
T ss_dssp ECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCC--------CCS
T ss_pred ecCCCCceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--------CCc
Confidence 76544332 33455667889999888999999999999999999999999986543332 222211111 111
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
......++ ++.+|+.+||+.||++|||++|+++|+|+...
T Consensus 250 ~~~~~~s~----~~~~li~~~L~~dp~~R~s~~eil~Hp~~~~~ 289 (352)
T d1koba_ 250 DAFSSVSP----EAKDFIKNLLQKEPRKRLTVHDALEHPWLKGD 289 (352)
T ss_dssp STTTTSCH----HHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSC
T ss_pred ccccCCCH----HHHHHHHHHccCChhHCcCHHHHhcCHhhCCC
Confidence 11223333 48899999999999999999999999998643
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.9e-49 Score=407.16 Aligned_cols=250 Identities=18% Similarity=0.272 Sum_probs=204.5
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc---CCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS---KKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|+..+.||+|+||+||+|+.. +|+.||||+++.. .....+.+.+|++++++++|||||++++++.+.+
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~------ 81 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE------ 81 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSS------
T ss_pred CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECC------
Confidence 56889999999999999999975 7999999999753 2344567999999999999999999999998643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..|+|||||++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+|+
T Consensus 82 -~~~ivmEy~~gg~L~~~~~~~~-~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~NIll~~~~~vkl~DFG~a~ 156 (288)
T d1uu3a_ 82 -KLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAK 156 (288)
T ss_dssp -EEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred -EEEEEEEccCCCCHHHhhhccC-CCCHHHHHHHHHHHHHHHHhhccc---cEEcCcCCccccccCCCceEEecccccce
Confidence 4899999999999999987554 699999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccC----CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHH-Hhhhhhccccccccccc
Q 004195 636 LAEARG----KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLV-KDLLQVNIGTDEARKSI 710 (769)
Q Consensus 636 ~~~~~~----~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~ 710 (769)
...... .....++..|++||.+.+..|+.++||||+||++|||+||++||........ ..+....
T Consensus 157 ~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~---------- 226 (288)
T d1uu3a_ 157 VLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE---------- 226 (288)
T ss_dssp ECC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTC----------
T ss_pred ecccCCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCC----------
Confidence 654322 1223456678999999999999999999999999999999999976543322 2222111
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHH------HHHHhHhhh
Q 004195 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVED------TLWNLQFAT 756 (769)
Q Consensus 711 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e------vl~~l~~~~ 756 (769)
+.+....++ ++.+++.+||+.||++|||++| +++|+||..
T Consensus 227 --~~~p~~~s~----~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~ 272 (288)
T d1uu3a_ 227 --YDFPEKFFP----KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFES 272 (288)
T ss_dssp --CCCCTTCCH----HHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTT
T ss_pred --CCCCccCCH----HHHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCC
Confidence 111223344 4889999999999999999988 567777754
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=1.6e-48 Score=415.62 Aligned_cols=257 Identities=14% Similarity=0.193 Sum_probs=210.8
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
-++|+..+.||+|+||.||+|+.. +|+.||||++........+.+.+|++++++++|||||++++++.+.+ .
T Consensus 25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~-------~ 97 (350)
T d1koaa2 25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDN-------E 97 (350)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETT-------E
T ss_pred ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECC-------E
Confidence 357999999999999999999975 79999999997654444567899999999999999999999998643 4
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeC--CCceeeecCCCCch
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD--ENFHVKINSYNLPL 635 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld--~~~~~kl~DFGla~ 635 (769)
.|+|||||++|+|.+++.+....+++..+..|+.||+.||+|||+. +||||||||+|||++ .++.+||+|||+|+
T Consensus 98 ~~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~ 174 (350)
T d1koaa2 98 MVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTA 174 (350)
T ss_dssp EEEEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhc---CCeeeeechhHeeeccCCCCeEEEeecchhe
Confidence 8999999999999999975555799999999999999999999999 999999999999995 46889999999997
Q ss_pred hhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccccccccccccCc
Q 004195 636 LAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 636 ~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~ 713 (769)
....... ....++..|++||.+.+..++.++||||+||++|||+||+.||.+..... ...+....... ++
T Consensus 175 ~~~~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~--------~~ 246 (350)
T d1koaa2 175 HLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNM--------DD 246 (350)
T ss_dssp ECCTTSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCS--------CC
T ss_pred ecccccccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC--------Cc
Confidence 6644333 23445677889999998899999999999999999999999997654332 22222211111 11
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
......++ ++.+++.+||+.||++|||++|+++|+|+...
T Consensus 247 ~~~~~~s~----~~~~li~~~L~~dP~~R~t~~eil~hp~~~~~ 286 (350)
T d1koaa2 247 SAFSGISE----DGKDFIRKLLLADPNTRMTIHQALEHPWLTPG 286 (350)
T ss_dssp GGGGGCCH----HHHHHHHHHCCSSGGGSCCHHHHHHSTTTSCT
T ss_pred ccccCCCH----HHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence 11122333 48899999999999999999999999998743
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.9e-48 Score=408.14 Aligned_cols=249 Identities=22% Similarity=0.303 Sum_probs=202.1
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCCh---hHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSP---HMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~---~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
.|+..+.||+|+||+||+|+.. +|+.||||+++....... +.+.+|++++++++|||||++++++.+.+
T Consensus 16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~------- 88 (309)
T d1u5ra_ 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH------- 88 (309)
T ss_dssp HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT-------
T ss_pred hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECC-------
Confidence 4888899999999999999965 789999999986543332 46889999999999999999999998643
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..|+|||||++|+|..++.... .+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|+.
T Consensus 89 ~~~iv~E~~~~g~l~~~~~~~~-~l~e~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~ 164 (309)
T d1u5ra_ 89 TAWLVMEYCLGSASDLLEVHKK-PLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASI 164 (309)
T ss_dssp EEEEEEECCSEEHHHHHHHHTS-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBS
T ss_pred EEEEEEEecCCCchHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEECCCCCEEEeecccccc
Confidence 4899999999999987665433 699999999999999999999999 999999999999999999999999999976
Q ss_pred hhccCCcceeecCCCcchhhhcc---CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccccccccccccC
Q 004195 637 AEARGKGSAEVSSPAKKTSVLAR---TEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTDEARKSIVD 712 (769)
Q Consensus 637 ~~~~~~~~~~~~~~~~~pe~~~~---~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~d 712 (769)
.... ....++..|++||.+.+ ..|+.++|||||||++|||++|++||.+..... ........ .
T Consensus 165 ~~~~--~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~-----------~ 231 (309)
T d1u5ra_ 165 MAPA--NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE-----------S 231 (309)
T ss_dssp SSSB--CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC-----------C
T ss_pred cCCC--CccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCC-----------C
Confidence 5432 23345667889998753 468999999999999999999999987543322 22211110 1
Q ss_pred ccc-cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 713 PAV-MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 713 ~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
+.+ ...+++ ++.+++.+||+.||++|||++|+++|+|+...
T Consensus 232 ~~~~~~~~s~----~~~~li~~~L~~dP~~Rpt~~ell~Hp~~~~~ 273 (309)
T d1u5ra_ 232 PALQSGHWSE----YFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 273 (309)
T ss_dssp CCCSCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSC
T ss_pred CCCCCCCCCH----HHHHHHHHHCcCChhHCcCHHHHHhCHHhcCC
Confidence 111 122333 48899999999999999999999999998643
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-48 Score=402.20 Aligned_cols=256 Identities=18% Similarity=0.312 Sum_probs=197.1
Q ss_pred cCCCCcCccccCCceeEEEEEeCC-C----cEEEEEEccccCCC-ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTD-G----TLVAIRSLKMSKKS-SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~-g----~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
++|+..++||+|+||+||+|++++ + ..||||+++..... ...+|.+|++++++++|||||+++|+|.+...
T Consensus 7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~--- 83 (283)
T d1mqba_ 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKP--- 83 (283)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS---
T ss_pred HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCc---
Confidence 457788999999999999999753 2 47999999754322 23468999999999999999999999986443
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
.++|||||.+|++.+++......++|.++.+++.||++||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 84 ----~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~---~iiHrDlKp~NILl~~~~~~Kl~DFGl 156 (283)
T d1mqba_ 84 ----MMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGL 156 (283)
T ss_dssp ----EEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC
T ss_pred ----eEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhcccc---ccccCccccceEEECCCCeEEEcccch
Confidence 8999999999999998876656799999999999999999999998 999999999999999999999999999
Q ss_pred chhhhccCCc-----ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCC-CCCCCchhHHHHhhhhhcccccccc
Q 004195 634 PLLAEARGKG-----SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGR-PITSENVVVLVKDLLQVNIGTDEAR 707 (769)
Q Consensus 634 a~~~~~~~~~-----~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~-~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (769)
|+........ ...++..|++||.+....++.++|||||||++|||+||. +|+.......+...+...
T Consensus 157 a~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~------- 229 (283)
T d1mqba_ 157 SRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG------- 229 (283)
T ss_dssp -----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT-------
T ss_pred hhcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhcc-------
Confidence 9875433211 122344688999999999999999999999999999965 444433332222222111
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 708 KSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 708 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
..+.....++ .++.+++.+||+.||++||||.||++.+....+.+
T Consensus 230 ---~~~~~~~~~~----~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~p 274 (283)
T d1mqba_ 230 ---FRLPTPMDCP----SAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 274 (283)
T ss_dssp ---CCCCCCTTCB----HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred ---CCCCCchhhH----HHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhCc
Confidence 1122222333 44889999999999999999999999987655443
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.6e-48 Score=402.65 Aligned_cols=255 Identities=16% Similarity=0.215 Sum_probs=207.8
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC------CChhHHHHHHHHHhhccCCceeeEeeeeeccCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK------SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLD 551 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~------~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~ 551 (769)
.+.|+..+.||+|+||+||+|+.. +|+.||||+++.... ...+.+.+|++++++++|||||++++++.+.+
T Consensus 9 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~-- 86 (293)
T d1jksa_ 9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT-- 86 (293)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--
T ss_pred ccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--
Confidence 467899999999999999999975 799999999975422 12467999999999999999999999998643
Q ss_pred CCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc----eee
Q 004195 552 DPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF----HVK 627 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~----~~k 627 (769)
..|+|||||++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+|
T Consensus 87 -----~~~iv~E~~~gg~L~~~i~~~~-~l~~~~~~~~~~qi~~al~yLH~~---~ivHrDiKp~Nill~~~~~~~~~vk 157 (293)
T d1jksa_ 87 -----DVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIK 157 (293)
T ss_dssp -----EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSSSSCCEE
T ss_pred -----EEEEEEEcCCCccccchhcccc-ccchhHHHHHHHHHHHHHHhhhhc---ceeecccccceEEEecCCCcccceE
Confidence 4899999999999999997544 699999999999999999999999 999999999999998776 499
Q ss_pred ecCCCCchhhhccC-CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHH-Hhhhhhcccccc
Q 004195 628 INSYNLPLLAEARG-KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLV-KDLLQVNIGTDE 705 (769)
Q Consensus 628 l~DFGla~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~~ 705 (769)
++|||+|+...... .....++..|++||.+.+..++.++|||||||++|||+||+.||.+...... ..+.......
T Consensus 158 l~DfG~a~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~-- 235 (293)
T d1jksa_ 158 IIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF-- 235 (293)
T ss_dssp ECCCTTCEECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCC--
T ss_pred ecchhhhhhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCC--
Confidence 99999997664433 2334455678999999888899999999999999999999999976543332 2222111110
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 706 ARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 706 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.+......++ .+.+++.+||+.||++|||++|+++|+|+..
T Consensus 236 ------~~~~~~~~s~----~~~~li~~~L~~dP~~R~s~~eil~hp~~~~ 276 (293)
T d1jksa_ 236 ------EDEYFSNTSA----LAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 276 (293)
T ss_dssp ------CHHHHTTSCH----HHHHHHHTTSCSSGGGSCCHHHHHHSTTTCC
T ss_pred ------CchhcCCCCH----HHHHHHHHHccCChhHCcCHHHHhcCcccCC
Confidence 1111122333 4889999999999999999999999999964
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.2e-48 Score=399.08 Aligned_cols=241 Identities=18% Similarity=0.241 Sum_probs=191.7
Q ss_pred CccccCCceeEEEEEeC---CCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEE
Q 004195 486 SFMCDASHGQIYKGKLT---DGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYL 560 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~---~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~l 560 (769)
+.||+|+||+||+|.++ .++.||||+++...... .++|.+|++++++++|||||+++|+|.+.. .++
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~~--------~~l 84 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAES--------WML 84 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSS--------EEE
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccCC--------EEE
Confidence 57999999999999864 35689999997543322 357999999999999999999999986421 689
Q ss_pred EEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhcc
Q 004195 561 IFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEAR 640 (769)
Q Consensus 561 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~ 640 (769)
|||||++|+|.+++++.. .++|..+.+|+.||++||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 85 vmE~~~~g~L~~~l~~~~-~l~~~~~~~i~~qi~~gl~ylH~~---~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~ 160 (277)
T d1xbba_ 85 VMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 160 (277)
T ss_dssp EEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred EEEcCCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHhhHHhC---CcccCCCcchhhcccccCcccccchhhhhhcccc
Confidence 999999999999998554 699999999999999999999998 9999999999999999999999999999765332
Q ss_pred CC-----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCcc
Q 004195 641 GK-----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 641 ~~-----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
.. ....++..|++||.+....++.++|||||||++|||+| |++||.+.....+...+.... .+.
T Consensus 161 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~----------~~~ 230 (277)
T d1xbba_ 161 ENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE----------RMG 230 (277)
T ss_dssp CSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC----------CCC
T ss_pred ccccccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCC----------CCC
Confidence 21 11233456889999988899999999999999999998 899997654443333222110 112
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHh
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNL 752 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l 752 (769)
....+++ ++.+++.+||+.||++|||++||++.+
T Consensus 231 ~p~~~~~----~~~~li~~cl~~dp~~RPs~~~i~~~L 264 (277)
T d1xbba_ 231 CPAGCPR----EMYDLMNLCWTYDVENRPGFAAVELRL 264 (277)
T ss_dssp CCTTCCH----HHHHHHHHHTCSSTTTSCCHHHHHHHH
T ss_pred CCcccCH----HHHHHHHHHcCCCHhHCcCHHHHHHHh
Confidence 2233444 488999999999999999999996544
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-47 Score=403.24 Aligned_cols=251 Identities=18% Similarity=0.237 Sum_probs=209.4
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc---CCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS---KKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|+..+.||+|+||.||+|+.+ +|+.||||++++. .....+.+.+|+++|++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~------ 78 (337)
T d1o6la_ 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD------ 78 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSS------
T ss_pred HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeecccc------
Confidence 57899999999999999999975 7999999999754 2345577899999999999999999999998744
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
.+|+|||||++|+|.+++.+.+ .+++..+..++.|++.||+|||++ +|+||||||+|||++.+|.+||+|||+|+
T Consensus 79 -~~~iv~ey~~gg~L~~~~~~~~-~~~e~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NILl~~~g~vkl~DFG~a~ 153 (337)
T d1o6la_ 79 -RLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK 153 (337)
T ss_dssp -EEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred -ccccceeccCCCchhhhhhccc-CCcHHHHHHHHHHHhhhhhhhhhc---CccccccCHHHeEecCCCCEEEeeccccc
Confidence 4899999999999999998554 689999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccC--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCc
Q 004195 636 LAEARG--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 636 ~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
...... .....++..|++||.+.+..|+.++||||+||++|||+||++||.+.........+... .+
T Consensus 154 ~~~~~~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~-----------~~ 222 (337)
T d1o6la_ 154 EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME-----------EI 222 (337)
T ss_dssp CSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-----------CC
T ss_pred ccccCCcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcC-----------CC
Confidence 653322 23345667789999999999999999999999999999999999876544332222110 11
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCC-----HHHHHHHhHhhh
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPS-----VEDTLWNLQFAT 756 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~l~~~~ 756 (769)
.+...+++ ++.+|+.+||++||++||+ ++|+++|+||..
T Consensus 223 ~~p~~~s~----~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~ 266 (337)
T d1o6la_ 223 RFPRTLSP----EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266 (337)
T ss_dssp CCCTTSCH----HHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred CCCccCCH----HHHHHHHhhccCCchhhcccccccHHHHHcCccccc
Confidence 12223344 4889999999999999994 899999999864
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-47 Score=404.92 Aligned_cols=258 Identities=13% Similarity=0.186 Sum_probs=208.8
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
.++|+..+.||+|+||+||+|+.. +|+.||||.++... .....+.+|+++|++++|||||++++++.+.+ .
T Consensus 4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~-------~ 75 (321)
T d1tkia_ 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESME-------E 75 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETT-------E
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECC-------E
Confidence 467889999999999999999976 78999999997542 23456889999999999999999999998644 4
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC--ceeeecCCCCch
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN--FHVKINSYNLPL 635 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~--~~~kl~DFGla~ 635 (769)
+|+|||||++|+|.+++...+..+++.++..|+.||++||+|||+. +|+||||||+|||++.+ ..+||+|||+++
T Consensus 76 ~~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~---~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~ 152 (321)
T d1tkia_ 76 LVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQAR 152 (321)
T ss_dssp EEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCE
T ss_pred EEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHc---CCCcccccccceeecCCCceEEEEcccchhh
Confidence 8999999999999999987665799999999999999999999999 99999999999999854 579999999997
Q ss_pred hhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHH-HhhhhhccccccccccccCc
Q 004195 636 LAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLV-KDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 636 ~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~ 713 (769)
....... ....++..|++||...+..|+.++||||+||++|||+||++||........ ..+....... +.
T Consensus 153 ~~~~~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~--------~~ 224 (321)
T d1tkia_ 153 QLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTF--------DE 224 (321)
T ss_dssp ECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCC--------CH
T ss_pred ccccCCcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC--------Ch
Confidence 6543332 233445667889988888899999999999999999999999976554332 2222211111 11
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
.....+++ ++.+++.+|++.||++|||++|+++|+|+.+..+
T Consensus 225 ~~~~~~s~----~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~~~ 266 (321)
T d1tkia_ 225 EAFKEISI----EAMDFVDRLLVKERKSRMTASEALQHPWLKQKIE 266 (321)
T ss_dssp HHHTTSCH----HHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSCGG
T ss_pred hhccCCCH----HHHHHHHHHccCChhHCcCHHHHhcCHhhccCcc
Confidence 11122333 4889999999999999999999999999975543
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.8e-48 Score=407.81 Aligned_cols=250 Identities=22% Similarity=0.305 Sum_probs=199.6
Q ss_pred cCCCCcCccccCCceeEEEEEeCC-C-----cEEEEEEccccC-CCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTD-G-----TLVAIRSLKMSK-KSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLD 551 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~-g-----~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~ 551 (769)
++|+..+.||+|+||+||+|+... + ..||||.+.... ......+.+|+.++.++ +|||||+++++|.+.+.
T Consensus 37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~- 115 (325)
T d1rjba_ 37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP- 115 (325)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS-
T ss_pred HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCe-
Confidence 467888999999999999998642 2 369999987542 33346789999999998 89999999999987543
Q ss_pred CCCcceEEEEEeccCCCchhhhhcCCC----------------------CCCCHHHHHHHHHHHHHHhcccccCCCCCcc
Q 004195 552 DPSISIIYLIFEYAPNETLRSFISGPG----------------------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVF 609 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~----------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iv 609 (769)
.++|||||++|+|.++++... ..++|..++.|+.||++||+|||++ +||
T Consensus 116 ------~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~---~Ii 186 (325)
T d1rjba_ 116 ------IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCV 186 (325)
T ss_dssp ------CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred ------EEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---Cee
Confidence 799999999999999997432 2589999999999999999999998 999
Q ss_pred ccCccccceeeCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCC
Q 004195 610 SNNLKITDVLLDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPI 684 (769)
Q Consensus 610 HrDlKp~NILld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p 684 (769)
||||||+|||++.++.+||+|||+|+....... ....++..|++||.+.+..++.++|||||||++|||+| |++|
T Consensus 187 HRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~P 266 (325)
T d1rjba_ 187 HRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP 266 (325)
T ss_dssp ETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCS
T ss_pred eccCchhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCC
Confidence 999999999999999999999999976654432 22334567899999999999999999999999999998 8999
Q ss_pred CCCchh-HHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 685 TSENVV-VLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 685 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
|.+... ..+...+.... .+.....+++ ++.+|+.+||+.||++|||++||+++|.
T Consensus 267 f~~~~~~~~~~~~~~~~~----------~~~~p~~~~~----~l~~li~~cl~~dP~~RPt~~ei~~~L~ 322 (325)
T d1rjba_ 267 YPGIPVDANFYKLIQNGF----------KMDQPFYATE----EIYIIMQSCWAFDSRKRPSFPNLTSFLG 322 (325)
T ss_dssp STTCCCSHHHHHHHHTTC----------CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHhcCC----------CCCCCCcCCH----HHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence 976432 22223222111 1122223344 4899999999999999999999999985
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.7e-47 Score=399.81 Aligned_cols=249 Identities=16% Similarity=0.227 Sum_probs=207.8
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc---CCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS---KKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|+..+.||+|+||+||+|+.+ +|+.||||+++.. .....+.+.+|+.++++++|||||++++++.+.+
T Consensus 4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~------ 77 (316)
T d1fota_ 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQ------ 77 (316)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSS------
T ss_pred hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCC------
Confidence 46888999999999999999975 7999999999743 2344578999999999999999999999998644
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..|+|||||++|+|..++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+
T Consensus 78 -~~~ivmE~~~gg~l~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NILl~~~g~vkL~DFG~a~ 152 (316)
T d1fota_ 78 -QIFMIMDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAK 152 (316)
T ss_dssp -EEEEEECCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCE
T ss_pred -eeeeEeeecCCccccccccccc-cccccHHHHHHHHHHHhhhhhccC---cEEccccCchheeEcCCCCEEEecCccce
Confidence 4899999999999999988554 688999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHH-hhhhhccccccccccccCcc
Q 004195 636 LAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVK-DLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~ 714 (769)
...... ....++..|++||.+.+..|+.++||||+||++|||+||+.||.+....... .+.... ..
T Consensus 153 ~~~~~~-~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~------------~~ 219 (316)
T d1fota_ 153 YVPDVT-YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAE------------LR 219 (316)
T ss_dssp ECSSCB-CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCC------------CC
T ss_pred Eecccc-ccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCC------------CC
Confidence 764433 3345667789999998888999999999999999999999999765433222 222111 11
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCC-----CHHHHHHHhHhhh
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRP-----SVEDTLWNLQFAT 756 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~~~~ 756 (769)
.....++ ++.+++.+||+.||.+|| |++|+++|+||..
T Consensus 220 ~p~~~s~----~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~f~~ 262 (316)
T d1fota_ 220 FPPFFNE----DVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKE 262 (316)
T ss_dssp CCTTSCH----HHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSS
T ss_pred CCCCCCH----HHHHHHHHHhhhCHHhccccchhhHHHHHcCccccc
Confidence 1122333 488999999999999996 9999999999864
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=1.5e-47 Score=410.77 Aligned_cols=254 Identities=17% Similarity=0.220 Sum_probs=204.5
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHH---HHHHhhccCCceeeEeeeeeccCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYH---IELISKLRHSNLVSALGHCLDFSLDD 552 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E---i~~l~~l~H~nIv~l~~~~~~~~~~~ 552 (769)
++|+..+.||+|+||.||+|+.. +|+.||||++.... ......+.+| +++++.++|||||++++++.+.+
T Consensus 4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~--- 80 (364)
T d1omwa3 4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD--- 80 (364)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS---
T ss_pred HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECC---
Confidence 57899999999999999999976 79999999986432 2233444444 66777788999999999998643
Q ss_pred CCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCC
Q 004195 553 PSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYN 632 (769)
Q Consensus 553 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFG 632 (769)
..|+|||||++|+|.+++.+.. .+++..+..++.||+.||+|||+. +||||||||+|||++.++.+||+|||
T Consensus 81 ----~~~ivmE~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~ylH~~---~iiHrDlKP~NILl~~~g~iKl~DFG 152 (364)
T d1omwa3 81 ----KLSFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLG 152 (364)
T ss_dssp ----EEEEEECCCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSSSCEEECCCT
T ss_pred ----EEEEEEEecCCCcHHHHHHhcc-cccHHHHHHHHHHHHHHHHHHHHC---CccceeeccceeEEcCCCcEEEeeec
Confidence 4899999999999999998554 689999999999999999999999 99999999999999999999999999
Q ss_pred CchhhhccCCcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccccccc
Q 004195 633 LPLLAEARGKGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIV 711 (769)
Q Consensus 633 la~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (769)
+|+...........++..|++||.+.. ..|+.++|||||||++|||+||++||..................
T Consensus 153 la~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~-------- 224 (364)
T d1omwa3 153 LACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM-------- 224 (364)
T ss_dssp TCEECSSSCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSC--------
T ss_pred eeeecCCCcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccC--------
Confidence 998766555555567778899998864 46899999999999999999999999764322222222211111
Q ss_pred CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCC-----HHHHHHHhHhhh
Q 004195 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRPS-----VEDTLWNLQFAT 756 (769)
Q Consensus 712 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~l~~~~ 756 (769)
.+.....++++ +.+++.+||+.||++||| ++|+++|+||..
T Consensus 225 ~~~~~~~~s~~----~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~ 270 (364)
T d1omwa3 225 AVELPDSFSPE----LRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 270 (364)
T ss_dssp CCCCCSSSCHH----HHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTT
T ss_pred CCCCCCCCCHH----HHHHHHHHcccCHHHhCCCcccCHHHHHcCccccC
Confidence 11122234444 899999999999999999 799999999864
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=1.6e-47 Score=394.82 Aligned_cols=254 Identities=14% Similarity=0.267 Sum_probs=204.2
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC---------hhHHHHHHHHHhhcc-CCceeeEeeeeecc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS---------PHMYTYHIELISKLR-HSNLVSALGHCLDF 548 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~---------~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~ 548 (769)
++|+..+.||+|+||+||+|+.. +|+.||||+++...... .+.+.+|+.++++++ |||||++++++.+.
T Consensus 3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 82 (277)
T d1phka_ 3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN 82 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence 57889999999999999999975 79999999997653221 135889999999997 99999999999864
Q ss_pred CCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeee
Q 004195 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKI 628 (769)
Q Consensus 549 ~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl 628 (769)
+ ..|+|||||++|+|.++++..+ .+++.++..++.||++||+|||+. +|+||||||+|||++.++.+||
T Consensus 83 ~-------~~~ivmE~~~~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~~kl 151 (277)
T d1phka_ 83 T-------FFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKL 151 (277)
T ss_dssp S-------EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEE
T ss_pred c-------ceEEEEEcCCCchHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHc---CCcccccccceEEEcCCCCeEE
Confidence 4 4899999999999999998554 799999999999999999999999 9999999999999999999999
Q ss_pred cCCCCchhhhccCC-cceeecCCCcchhhhc------cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhh-hhc
Q 004195 629 NSYNLPLLAEARGK-GSAEVSSPAKKTSVLA------RTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLL-QVN 700 (769)
Q Consensus 629 ~DFGla~~~~~~~~-~~~~~~~~~~~pe~~~------~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~-~~~ 700 (769)
+|||+++....... ....++..+.+||.+. ...++.++||||+||++|||+||+.||.+.........+ ...
T Consensus 152 ~DFG~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~ 231 (277)
T d1phka_ 152 TDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGN 231 (277)
T ss_dssp CCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC
T ss_pred ccchheeEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCC
Confidence 99999976544322 2233445667787664 235688999999999999999999999876544332222 111
Q ss_pred cccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 701 IGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 701 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.. .........++ ++.+++.+||+.||++|||++||++|+|+.+
T Consensus 232 ~~--------~~~~~~~~~s~----~~~~li~~~L~~~p~~R~s~~eil~h~~~~~ 275 (277)
T d1phka_ 232 YQ--------FGSPEWDDYSD----TVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 275 (277)
T ss_dssp CC--------CCTTTGGGSCH----HHHHHHHHHCCSSGGGSCCHHHHTTSGGGCT
T ss_pred CC--------CCCcccccCCH----HHHHHHHHHccCChhHCcCHHHHHcCHHHHH
Confidence 10 01111122333 4899999999999999999999999999864
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4e-47 Score=393.25 Aligned_cols=248 Identities=24% Similarity=0.362 Sum_probs=196.5
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
++|+..+.||+|+||+||+|++++++.||||+++.. ....+.|.+|+.++++++|||||+++|+|.+.. .+
T Consensus 17 ~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~--------~~ 87 (285)
T d1fmka3 17 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP--------IY 87 (285)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--------CE
T ss_pred HHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcc-cCCHHHHHHHHHHHHhcccCCEeEEEEEEecCC--------eE
Confidence 468889999999999999999988889999999754 345678999999999999999999999986422 68
Q ss_pred EEEeccCCCchhhhhcC-CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 560 LIFEYAPNETLRSFISG-PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
+|||||++|+|.+++.. ....++|.++..|+.||++||+|||+. +|+||||||+|||+|+++++||+|||+|+...
T Consensus 88 lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~---~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~ 164 (285)
T d1fmka3 88 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE 164 (285)
T ss_dssp EEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC---
T ss_pred EEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhh---heecccccceEEEECCCCcEEEcccchhhhcc
Confidence 99999999999998873 223699999999999999999999998 99999999999999999999999999997654
Q ss_pred ccCC---cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCC-CCCCchhHHHHhhhhhccccccccccccCcc
Q 004195 639 ARGK---GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRP-ITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 639 ~~~~---~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
.... ....++..|++||.+....++.++|||||||++|||+||+. |+...........+... ..+.
T Consensus 165 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~----------~~~~ 234 (285)
T d1fmka3 165 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG----------YRMP 234 (285)
T ss_dssp -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT----------CCCC
T ss_pred CCCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhc----------CCCC
Confidence 3322 22334556888999999999999999999999999999654 44443333222222211 1112
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
....+++ ++.+++.+||+.||++||||++|++.++
T Consensus 235 ~~~~~~~----~l~~li~~cl~~dP~~Rps~~~i~~~L~ 269 (285)
T d1fmka3 235 CPPECPE----SLHDLMCQCWRKEPEERPTFEYLQAFLE 269 (285)
T ss_dssp CCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCcccCH----HHHHHHHHHcccCHhHCcCHHHHHHHHh
Confidence 2233443 4889999999999999999999998554
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-47 Score=390.44 Aligned_cols=250 Identities=19% Similarity=0.298 Sum_probs=197.0
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
++|+..+.||+|+||.||+|+++ |+.||||+++.. ...+++.+|++++++++|||||+++|+|.+.. +.++
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~------~~~~ 77 (262)
T d1byga_ 7 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEK------GGLY 77 (262)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--------CCE
T ss_pred HHeEEeEEEecCCCeEEEEEEEC-CeEEEEEEECcH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecC------CcEE
Confidence 34667789999999999999985 788999999753 34578999999999999999999999986532 1279
Q ss_pred EEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 560 LIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
+||||+++|+|.+++... ...++|..+++|+.||+.||+|||+. +|+||||||+||+++.++.+|++|||+++...
T Consensus 78 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~ 154 (262)
T d1byga_ 78 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 154 (262)
T ss_dssp EEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-----
T ss_pred EEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccC---ceeccccchHhheecCCCCEeecccccceecC
Confidence 999999999999999743 23589999999999999999999998 99999999999999999999999999997654
Q ss_pred ccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCccccC
Q 004195 639 ARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMN 717 (769)
Q Consensus 639 ~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 717 (769)
... .....+..|++||.+.+..+++++|||||||++|||+| |++|+.......+...+... ..+....
T Consensus 155 ~~~-~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~----------~~~~~~~ 223 (262)
T d1byga_ 155 STQ-DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG----------YKMDAPD 223 (262)
T ss_dssp --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTT----------CCCCCCT
T ss_pred CCC-ccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcC----------CCCCCCc
Confidence 332 22344567889999988999999999999999999998 68888765443333322211 1222223
Q ss_pred CCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 718 ECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 718 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.+++ ++.+++.+||+.||++||||.|++++++.++
T Consensus 224 ~~~~----~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~ 258 (262)
T d1byga_ 224 GCPP----AVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 258 (262)
T ss_dssp TCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCCH----HHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence 3444 4889999999999999999999999997654
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.6e-47 Score=398.57 Aligned_cols=252 Identities=18% Similarity=0.293 Sum_probs=202.2
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCc----EEEEEEcccc-CCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGT----LVAIRSLKMS-KKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~----~vAvK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
++|+..+.||+|+||+||+|++. +|+ .||||+++.. .....++|.+|++++++++|||||+++|+|.+..
T Consensus 9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~---- 84 (317)
T d1xkka_ 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST---- 84 (317)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESSS----
T ss_pred HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC----
Confidence 35888999999999999999965 454 5899988754 2344678999999999999999999999998632
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
.++++||+.+|+|.+++......++|..+.+++.|||+||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 85 ----~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~---~iiHrDlKp~NIll~~~~~~kl~DFGl 157 (317)
T d1xkka_ 85 ----VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGL 157 (317)
T ss_dssp ----EEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCCSH
T ss_pred ----eeEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHc---CcccCcchhhcceeCCCCCeEeecccc
Confidence 6889999999999999886666899999999999999999999998 999999999999999999999999999
Q ss_pred chhhhccCCc----ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccc
Q 004195 634 PLLAEARGKG----SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARK 708 (769)
Q Consensus 634 a~~~~~~~~~----~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (769)
|+........ ...++..|++||.+.+..++.++|||||||++|||+| |++||.......+...+....
T Consensus 158 a~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~------- 230 (317)
T d1xkka_ 158 AKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE------- 230 (317)
T ss_dssp HHHTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTC-------
T ss_pred ceecccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCC-------
Confidence 9876433221 1234567889999999999999999999999999999 788887654433333332211
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.+.....+++ ++.+++.+||+.||++|||+.||+++++...
T Consensus 231 ---~~~~p~~~~~----~~~~li~~cl~~dP~~RPs~~eil~~l~~~~ 271 (317)
T d1xkka_ 231 ---RLPQPPICTI----DVYMIMVKCWMIDADSRPKFRELIIEFSKMA 271 (317)
T ss_dssp ---CCCCCTTBCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---CCCCCcccCH----HHHHHHHHhCCCChhhCcCHHHHHHHHHHHH
Confidence 1111123333 4889999999999999999999999988654
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=6e-47 Score=396.93 Aligned_cols=258 Identities=20% Similarity=0.267 Sum_probs=205.3
Q ss_pred HHHHhcCCCCcCccccCCceeEEEEEeC------CCcEEEEEEccccCCC-ChhHHHHHHHHHhhccCCceeeEeeeeec
Q 004195 475 LKEATDCFDSSSFMCDASHGQIYKGKLT------DGTLVAIRSLKMSKKS-SPHMYTYHIELISKLRHSNLVSALGHCLD 547 (769)
Q Consensus 475 l~~~t~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~ 547 (769)
++-..++|+..+.||+|+||+||+|+++ +++.||||+++..... ..++|.+|++++++++||||++++++|.+
T Consensus 8 ~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~ 87 (301)
T d1lufa_ 8 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 87 (301)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred ccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeecc
Confidence 3334678999999999999999999863 3578999999754322 24579999999999999999999999986
Q ss_pred cCCCCCCcceEEEEEeccCCCchhhhhcCC-----------------------CCCCCHHHHHHHHHHHHHHhcccccCC
Q 004195 548 FSLDDPSISIIYLIFEYAPNETLRSFISGP-----------------------GYKLTWVQRIAAAIAIVKGVQFLHTGI 604 (769)
Q Consensus 548 ~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~-----------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~ 604 (769)
... .++||||+++|+|.+++... ...++|..+.+|+.|+++||+|||+.
T Consensus 88 ~~~-------~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~- 159 (301)
T d1lufa_ 88 GKP-------MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER- 159 (301)
T ss_dssp SSS-------CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred CCc-------eEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccC-
Confidence 443 79999999999999998521 12489999999999999999999998
Q ss_pred CCCccccCccccceeeCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh
Q 004195 605 VPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV 680 (769)
Q Consensus 605 ~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt 680 (769)
+||||||||+|||+|.++++||+|||+|+....... ....++..|++||.+.+..|+.++|||||||++|||++
T Consensus 160 --~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~ 237 (301)
T d1lufa_ 160 --KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 237 (301)
T ss_dssp --TCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred --CeEeeEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHc
Confidence 999999999999999999999999999976543322 22334567888999999999999999999999999999
Q ss_pred CC-CCCCCchhHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 681 GR-PITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 681 G~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
|. +||.......+...+.... .+.....+++ ++.+|+.+||+.||++||||.||++.++.+.
T Consensus 238 ~~~~p~~~~~~~e~~~~v~~~~----------~~~~p~~~~~----~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~ 300 (301)
T d1lufa_ 238 YGLQPYYGMAHEEVIYYVRDGN----------ILACPENCPL----ELYNLMRLCWSKLPADRPSFCSIHRILQRMC 300 (301)
T ss_dssp TTCCTTTTSCHHHHHHHHHTTC----------CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred cCCCCCCCCCHHHHHHHHHcCC----------CCCCCccchH----HHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence 85 6776554433322222110 1122223444 4889999999999999999999999887653
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.4e-46 Score=400.85 Aligned_cols=250 Identities=18% Similarity=0.221 Sum_probs=208.7
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc---CCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS---KKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|+..+.||+|+||.||+|+.+ +|+.||||++... .....+.+.+|++++++++|||||++++++.+..
T Consensus 41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~------ 114 (350)
T d1rdqe_ 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS------ 114 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS------
T ss_pred cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccc------
Confidence 57999999999999999999975 7999999998643 2344567899999999999999999999998644
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+.+|+|.+++.+.+ .+++..+..++.||+.||+|||+. +||||||||+|||++.++.+||+|||+|+
T Consensus 115 -~~~~v~e~~~~g~l~~~l~~~~-~l~e~~~~~i~~qi~~aL~yLH~~---~iiHRDIKP~NILl~~~g~ikL~DFG~a~ 189 (350)
T d1rdqe_ 115 -NLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK 189 (350)
T ss_dssp -EEEEEEECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred -ccccccccccccchhhhHhhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CEecCcCCHHHcccCCCCCEEeeeceeee
Confidence 3899999999999999997554 689999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccc
Q 004195 636 LAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAV 715 (769)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 715 (769)
...... ....++..|++||.+.+..++.++|||||||++|||+||++||...........+... .+..
T Consensus 190 ~~~~~~-~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~-----------~~~~ 257 (350)
T d1rdqe_ 190 RVKGRT-WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG-----------KVRF 257 (350)
T ss_dssp ECSSCB-CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-----------CCCC
T ss_pred eccccc-ccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcC-----------CCCC
Confidence 765432 3445677889999999999999999999999999999999999765433322211110 0111
Q ss_pred cCCCCHHHHHHHHHHHHHcCcCCCCCCC-----CHHHHHHHhHhhh
Q 004195 716 MNECSDESLKRMMELCLRCLSNEPKDRP-----SVEDTLWNLQFAT 756 (769)
Q Consensus 716 ~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~~~~ 756 (769)
...++++ +.+++.+||+.||++|+ |++|+++|+||..
T Consensus 258 p~~~s~~----~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~ 299 (350)
T d1rdqe_ 258 PSHFSSD----LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFAT 299 (350)
T ss_dssp CTTCCHH----HHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTT
T ss_pred CccCCHH----HHHHHHHHhhhCHHhccccccccHHHHHcCccccC
Confidence 2233443 88999999999999994 9999999999864
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7e-47 Score=390.80 Aligned_cols=253 Identities=17% Similarity=0.260 Sum_probs=194.4
Q ss_pred cCCCCcCccccCCceeEEEEEeCC----CcEEEEEEccccCCCC-hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTD----GTLVAIRSLKMSKKSS-PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~----g~~vAvK~~~~~~~~~-~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
++|+..+.||+|+||.||+|++.. +..||||.++...... .+.|.+|++++++++|||||+++|+|.+.
T Consensus 7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~------ 80 (273)
T d1mp8a_ 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN------ 80 (273)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS------
T ss_pred HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC------
Confidence 467788999999999999998642 4578999987543222 35689999999999999999999998642
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
..++||||+++|+|.+++......+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+|
T Consensus 81 --~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDlKp~NIll~~~~~~Kl~DfG~a 155 (273)
T d1mp8a_ 81 --PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLS 155 (273)
T ss_dssp --SCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC----
T ss_pred --eEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhccc---CeeccccchhheeecCCCcEEEccchhh
Confidence 26999999999999998875555799999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhccCC---cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccc
Q 004195 635 LLAEARGK---GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSI 710 (769)
Q Consensus 635 ~~~~~~~~---~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (769)
+....... ....++..|++||.+....++.++|||||||++|||+| |++||.......+...+...
T Consensus 156 ~~~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~---------- 225 (273)
T d1mp8a_ 156 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG---------- 225 (273)
T ss_dssp ---------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT----------
T ss_pred eeccCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcC----------
Confidence 76543221 22223445788999988999999999999999999998 89998765443332222111
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 711 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
..+.....+++ ++.+++.+||+.||++|||++||++++..+.+
T Consensus 226 ~~~~~~~~~~~----~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~ 268 (273)
T d1mp8a_ 226 ERLPMPPNCPP----TLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 268 (273)
T ss_dssp CCCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCH----HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 01122233444 48999999999999999999999999986543
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-46 Score=391.78 Aligned_cols=270 Identities=17% Similarity=0.267 Sum_probs=202.0
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC--CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK--SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
++|++.+.||+|+||+||+|+.. +|+.||||+++.... ...+.+.+|++++++++|||||++++++.+..
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~------- 74 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTEN------- 74 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETT-------
T ss_pred CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEecccccccc-------
Confidence 57999999999999999999975 799999999975432 23567999999999999999999999998743
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..|+||||+.++.+..........+++..+..++.|++.||+|||+. +||||||||+|||++.++.+||+|||+|+.
T Consensus 75 ~~~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~---~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~ 151 (298)
T d1gz8a_ 75 KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARA 151 (298)
T ss_dssp EEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTHHHH
T ss_pred ceeEEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcC---CEEccccCchheeecccCcceeccCCccee
Confidence 48999999976545444445555799999999999999999999999 999999999999999999999999999976
Q ss_pred hhccC--CcceeecCCCcchhhhccCC-CCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhcccccc-cccccc
Q 004195 637 AEARG--KGSAEVSSPAKKTSVLARTE-QDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIGTDE-ARKSIV 711 (769)
Q Consensus 637 ~~~~~--~~~~~~~~~~~~pe~~~~~~-~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~~~~-~~~~~~ 711 (769)
..... .....++..|++||...... ++.++||||+||++|||++|+.||.+.... .............+ .+....
T Consensus 152 ~~~~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 231 (298)
T d1gz8a_ 152 FGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 231 (298)
T ss_dssp HCCCSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGG
T ss_pred ccCCcccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccc
Confidence 64332 22334556778888766655 588999999999999999999999764422 22221111111110 010000
Q ss_pred -C----ccc---cCC----CCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 712 -D----PAV---MNE----CSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 712 -d----~~~---~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
. +.. ... ..+....++.+++.+||+.||++|||++|+++|+||..-.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~~ 291 (298)
T d1gz8a_ 232 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291 (298)
T ss_dssp GSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred cccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccCCC
Confidence 0 000 000 00112345889999999999999999999999999965433
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-46 Score=391.95 Aligned_cols=263 Identities=18% Similarity=0.260 Sum_probs=196.4
Q ss_pred CcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC-----hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 484 SSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS-----PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 484 ~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~-----~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
..++||+|+||+||+|+.. +|+.||||+++...... .+.+.+|++++++++|||||++++++.+.+.
T Consensus 2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~------- 74 (299)
T d1ua2a_ 2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN------- 74 (299)
T ss_dssp EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC-------
T ss_pred cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCc-------
Confidence 3578999999999999975 69999999997543221 3468899999999999999999999986443
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.++|||||+++++..+.... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+..
T Consensus 75 ~~ivmE~~~~~~~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~ 150 (299)
T d1ua2a_ 75 ISLVFDFMETDLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSF 150 (299)
T ss_dssp CEEEEECCSEEHHHHHTTCC-SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred eeehhhhhcchHHhhhhhcc-cCCCHHHHHHHHHHHHHHHHHhhcc---ceecccCCcceEEecCCCccccccCcccccc
Confidence 89999999988777666543 4789999999999999999999999 9999999999999999999999999999765
Q ss_pred hccCC--cceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccc-cccccccccC
Q 004195 638 EARGK--GSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIG-TDEARKSIVD 712 (769)
Q Consensus 638 ~~~~~--~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~-~~~~~~~~~d 712 (769)
..... ....++..|++||.+.. ..|+.++|||||||++|||+||++||....... ...+...... ..+.+.....
T Consensus 151 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~ 230 (299)
T d1ua2a_ 151 GSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCS 230 (299)
T ss_dssp TSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTS
T ss_pred CCCcccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhc
Confidence 43322 22345567888998764 457999999999999999999999997654332 2222211100 0000000000
Q ss_pred ------ccccCCCC-----HHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 713 ------PAVMNECS-----DESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 713 ------~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
-......+ +....++.+|+.+||+.||++|||++|+++|+||...
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~ 286 (299)
T d1ua2a_ 231 LPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNR 286 (299)
T ss_dssp STTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSS
T ss_pred cchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhCCC
Confidence 00000001 1123458999999999999999999999999999754
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-46 Score=398.73 Aligned_cols=261 Identities=15% Similarity=0.161 Sum_probs=201.9
Q ss_pred hcCCCCcC-ccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCCc
Q 004195 479 TDCFDSSS-FMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 479 t~~f~~~~-~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.++|.+.+ .||+|+||+||+|+.. +|+.||||+++. ...+.+|++++.++ +|||||+++++|.+... ..
T Consensus 10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~---~~ 81 (335)
T d2ozaa1 10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYA---GR 81 (335)
T ss_dssp GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEET---TE
T ss_pred ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeeccc---CC
Confidence 45787764 6999999999999974 799999999863 35688999997665 89999999999875321 13
Q ss_pred ceEEEEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC---CceeeecCC
Q 004195 556 SIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE---NFHVKINSY 631 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---~~~~kl~DF 631 (769)
..+|+|||||++|+|.+++.+. ...+++.++..|+.||+.||+|||+. +|+||||||+|||+++ ++.+||+||
T Consensus 82 ~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~---~iiHRDiKp~NIll~~~~~~~~~Kl~DF 158 (335)
T d2ozaa1 82 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF 158 (335)
T ss_dssp EEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSTTCCEEECCC
T ss_pred CEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHc---CCcccccccccccccccccccccccccc
Confidence 4589999999999999999754 34799999999999999999999999 9999999999999975 567999999
Q ss_pred CCchhhhccC-CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccc
Q 004195 632 NLPLLAEARG-KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSI 710 (769)
Q Consensus 632 Gla~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (769)
|+|+...... .....++..|++||.+.+..|+.++|||||||++|||+||++||.+.........+.......
T Consensus 159 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~------ 232 (335)
T d2ozaa1 159 GFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG------ 232 (335)
T ss_dssp TTCEECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSC------
T ss_pred ceeeeccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcC------
Confidence 9997654333 333456677889999988889999999999999999999999997543221111111100000
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 711 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
...+........+.++.+|+.+||+.||++|||+.|+++|+|+...
T Consensus 233 -~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~ 278 (335)
T d2ozaa1 233 -QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 278 (335)
T ss_dssp -SSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHHTT
T ss_pred -CCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhhCC
Confidence 0000011112334558999999999999999999999999999654
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-46 Score=395.40 Aligned_cols=251 Identities=18% Similarity=0.276 Sum_probs=205.4
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc---CCCChhHHHHHHHHHh-hccCCceeeEeeeeeccCCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS---KKSSPHMYTYHIELIS-KLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~Ei~~l~-~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
++|+..+.||+|+||+||+|+.. +|+.||||+++.. .....+.+.+|+.++. .++|||||++++++.+.+
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~----- 76 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE----- 76 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS-----
T ss_pred CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCC-----
Confidence 57888999999999999999976 7999999999753 2344566778888775 689999999999998744
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
..|+|||||++|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||++
T Consensus 77 --~~yivmEy~~~g~L~~~i~~~~-~~~e~~~~~~~~qi~~al~ylH~~---~iiHrDikp~NiL~~~~~~~kl~DFG~a 150 (320)
T d1xjda_ 77 --NLFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMC 150 (320)
T ss_dssp --EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred --ceeEEEeecCCCcHHHHhhccC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCcccceeecCCCceeccccchh
Confidence 4899999999999999998544 689999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhccC--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccC
Q 004195 635 LLAEARG--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVD 712 (769)
Q Consensus 635 ~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 712 (769)
+...... .....++..|++||.+.+..|+.++||||+||++|||+||+.||.+.....+...+... .
T Consensus 151 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~-----------~ 219 (320)
T d1xjda_ 151 KENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD-----------N 219 (320)
T ss_dssp BCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-----------C
T ss_pred hhcccccccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcC-----------C
Confidence 7543222 22234556788999999999999999999999999999999999865544332222111 1
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHH-HHHHHhHhhh
Q 004195 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVE-DTLWNLQFAT 756 (769)
Q Consensus 713 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl~~l~~~~ 756 (769)
+.+...+++ ++.+|+.+||+.||++|||+. |+++|+||..
T Consensus 220 ~~~p~~~s~----~~~dli~~~L~~dP~~R~s~~~~l~~hpff~~ 260 (320)
T d1xjda_ 220 PFYPRWLEK----EAKDLLVKLFVREPEKRLGVRGDIRQHPLFRE 260 (320)
T ss_dssp CCCCTTSCH----HHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTT
T ss_pred CCCCccCCH----HHHHHHHHhcccCCCCCcCHHHHHHhCchhcc
Confidence 222223344 488999999999999999995 8999999864
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=5.6e-46 Score=387.18 Aligned_cols=265 Identities=16% Similarity=0.256 Sum_probs=201.0
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccC--CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSK--KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|+..+.||+|+||+||+|+.++|+.||||+++... ....+.+.+|+.+|++++|||||++++++.+.+.
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~------- 74 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKR------- 74 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSC-------
T ss_pred CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCc-------
Confidence 5788899999999999999999999999999997543 2335689999999999999999999999987543
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.+++|||+.++.+..+.... ..+++..+..++.||+.||+|||+. +||||||||+|||++.++.+|++|||.+...
T Consensus 75 ~~i~~e~~~~~~~~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~---~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~ 150 (286)
T d1ob3a_ 75 LVLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAF 150 (286)
T ss_dssp EEEEEECCSEEHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHH
T ss_pred eeEEEEeehhhhHHHHHhhc-CCcchhhhHHHHHHHHHHHHHhccC---cEEecCCCCceeeEcCCCCEEecccccceec
Confidence 89999999877666666544 4799999999999999999999998 9999999999999999999999999999765
Q ss_pred hccCC--cceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccc-cccccccc--
Q 004195 638 EARGK--GSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIG-TDEARKSI-- 710 (769)
Q Consensus 638 ~~~~~--~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~-~~~~~~~~-- 710 (769)
..... ....++..|++||.+... .++.++||||+||++|||++|++||.+..... .......... ....+...
T Consensus 151 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 230 (286)
T d1ob3a_ 151 GIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTE 230 (286)
T ss_dssp CC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGG
T ss_pred ccCccccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhh
Confidence 43322 222345567788877654 56999999999999999999999997643222 2221111000 00000000
Q ss_pred ----------cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 711 ----------VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 711 ----------~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
..+.......+.....+.+++.+||+.||++|||++|+++|+||.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~f~ 285 (286)
T d1ob3a_ 231 LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285 (286)
T ss_dssp STTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGG
T ss_pred hhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccC
Confidence 000000111112234588999999999999999999999999986
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.5e-46 Score=390.34 Aligned_cols=254 Identities=23% Similarity=0.366 Sum_probs=201.2
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCc--EEEEEEcccc-CCCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGT--LVAIRSLKMS-KKSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~--~vAvK~~~~~-~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~ 554 (769)
++|+..+.||+|+||+||+|+++ +|. .||||+++.. .....++|.+|+++++++ +|||||+++|+|.+.+
T Consensus 10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~----- 84 (309)
T d1fvra_ 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG----- 84 (309)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT-----
T ss_pred HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCC-----
Confidence 46777899999999999999976 454 5788888643 233456799999999999 7999999999998643
Q ss_pred cceEEEEEeccCCCchhhhhcCC---------------CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCcccccee
Q 004195 555 ISIIYLIFEYAPNETLRSFISGP---------------GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVL 619 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NIL 619 (769)
..++||||+++|+|.++++.. ...++|..+.+++.|||+||+|+|+. +|+||||||+|||
T Consensus 85 --~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~---~iiHrDlkp~NIL 159 (309)
T d1fvra_ 85 --YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNIL 159 (309)
T ss_dssp --EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred --eeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcC---CccccccccceEE
Confidence 489999999999999999643 34799999999999999999999999 9999999999999
Q ss_pred eCCCceeeecCCCCchhhhccCCc-ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCC-CCCCCchhHHHHhhh
Q 004195 620 LDENFHVKINSYNLPLLAEARGKG-SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGR-PITSENVVVLVKDLL 697 (769)
Q Consensus 620 ld~~~~~kl~DFGla~~~~~~~~~-~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~-~p~~~~~~~~~~~~~ 697 (769)
++.++.+||+|||+++........ ...++..|++||.+....++.++|||||||++|||++|. +||.......+...+
T Consensus 160 ~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i 239 (309)
T d1fvra_ 160 VGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 239 (309)
T ss_dssp ECGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHG
T ss_pred EcCCCceEEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence 999999999999999765444333 234556788899998999999999999999999999975 567654433332222
Q ss_pred hhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 698 QVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 698 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
... ..+.....+++ ++.+++.+||+.||++||||+||++++....+
T Consensus 240 ~~~----------~~~~~~~~~~~----~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~ 285 (309)
T d1fvra_ 240 PQG----------YRLEKPLNCDD----EVYDLMRQCWREKPYERPSFAQILVSLNRMLE 285 (309)
T ss_dssp GGT----------CCCCCCTTBCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred Hhc----------CCCCCCccCCH----HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 111 11222223343 48999999999999999999999999876644
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-46 Score=386.26 Aligned_cols=252 Identities=18% Similarity=0.222 Sum_probs=191.5
Q ss_pred cCCCCcCccccCCceeEEEEEeC--CC--cEEEEEEccccCCCC---hhHHHHHHHHHhhccCCceeeEeeeeeccCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT--DG--TLVAIRSLKMSKKSS---PHMYTYHIELISKLRHSNLVSALGHCLDFSLDD 552 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~--~g--~~vAvK~~~~~~~~~---~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~ 552 (769)
++|+..+.||+|+||+||+|++. ++ ..||||+++...... .++|.+|++++++++|||||+++|+|.+..
T Consensus 8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~~--- 84 (273)
T d1u46a_ 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP--- 84 (273)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS---
T ss_pred HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeecc---
Confidence 45778899999999999999853 23 378999997653222 357999999999999999999999997532
Q ss_pred CCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCC
Q 004195 553 PSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYN 632 (769)
Q Consensus 553 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFG 632 (769)
.++|||||++|++.+.+......+++..+.+++.|+|+||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 85 -----~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDikp~NIll~~~~~vkl~DfG 156 (273)
T d1u46a_ 85 -----MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFG 156 (273)
T ss_dssp -----CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCT
T ss_pred -----hheeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhC---CEeeeeecHHHhccccccceeeccch
Confidence 5899999999999998875555799999999999999999999998 99999999999999999999999999
Q ss_pred CchhhhccCC-----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccc
Q 004195 633 LPLLAEARGK-----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEA 706 (769)
Q Consensus 633 la~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (769)
+++....... ....++..|++||.+.+..++.++|||||||++|||+| |++||.+.........+....
T Consensus 157 l~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~----- 231 (273)
T d1u46a_ 157 LMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG----- 231 (273)
T ss_dssp TCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSC-----
T ss_pred hhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCC-----
Confidence 9976533322 11223345678999988899999999999999999998 899997655443322221110
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 707 RKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 707 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
..+.....+++ .+.+++.+||+.||++||||+||++.+..+
T Consensus 232 ----~~~~~~~~~~~----~l~~li~~cl~~dp~~RPt~~ei~~~L~~~ 272 (273)
T d1u46a_ 232 ----ERLPRPEDCPQ----DIYNVMVQCWAHKPEDRPTFVALRDFLLEA 272 (273)
T ss_dssp ----CCCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----CCCCCcccccH----HHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 11112233444 488999999999999999999998776543
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-46 Score=386.65 Aligned_cols=245 Identities=18% Similarity=0.254 Sum_probs=200.3
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC------ChhHHHHHHHHHhhcc--CCceeeEeeeeeccCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS------SPHMYTYHIELISKLR--HSNLVSALGHCLDFSL 550 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~------~~~~~~~Ei~~l~~l~--H~nIv~l~~~~~~~~~ 550 (769)
++|+..+.||+|+||+||+|+.. +|+.||||+++..... ....+.+|+.++++++ |||||++++++.+.+
T Consensus 4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~- 82 (273)
T d1xwsa_ 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD- 82 (273)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS-
T ss_pred CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCC-
Confidence 56888999999999999999975 7999999999754322 1244778999999996 999999999998644
Q ss_pred CCCCcceEEEEEeccCC-CchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC-Cceeee
Q 004195 551 DDPSISIIYLIFEYAPN-ETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE-NFHVKI 628 (769)
Q Consensus 551 ~~~~~~~~~lV~Ey~~~-gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~-~~~~kl 628 (769)
..++||||+.+ +++.+++.... .+++.++..++.|+++||+|||+. +|+||||||+|||++. ++.+||
T Consensus 83 ------~~~lv~e~~~~~~~l~~~~~~~~-~l~e~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NIll~~~~~~vkl 152 (273)
T d1xwsa_ 83 ------SFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKL 152 (273)
T ss_dssp ------EEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEE
T ss_pred ------eEEEEEEeccCcchHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CCccccCcccceEEecCCCeEEE
Confidence 38999999976 67888887443 699999999999999999999999 9999999999999985 479999
Q ss_pred cCCCCchhhhccCCcceeecCCCcchhhhccCCC-CCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccc
Q 004195 629 NSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQ-DDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEAR 707 (769)
Q Consensus 629 ~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~~~~-~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (769)
+|||+|+...........++..|++||.+.+..+ +.++||||+||++|||+||+.||..... .....
T Consensus 153 ~DFG~a~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~-----i~~~~------- 220 (273)
T d1xwsa_ 153 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-----IIRGQ------- 220 (273)
T ss_dssp CCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-----HHHCC-------
T ss_pred CccccceecccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchH-----Hhhcc-------
Confidence 9999997665544445556677889998877665 5779999999999999999999975431 11111
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 708 KSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 708 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
..+...++++ +.+++.+||+.||++|||++|+++|+|+..
T Consensus 221 -----~~~~~~~s~~----~~~li~~~L~~dp~~R~s~~eil~hp~~~~ 260 (273)
T d1xwsa_ 221 -----VFFRQRVSSE----CQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260 (273)
T ss_dssp -----CCCSSCCCHH----HHHHHHHHTCSSGGGSCCHHHHHTSGGGSS
T ss_pred -----cCCCCCCCHH----HHHHHHHHccCCHhHCcCHHHHhcCHhhCC
Confidence 1111233443 889999999999999999999999999864
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=1.4e-45 Score=381.93 Aligned_cols=257 Identities=16% Similarity=0.243 Sum_probs=200.5
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCCh---hHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSP---HMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~---~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
.++|+..+.||+|+||+||+|+.. +|+.||||+++.....+. +.+.+|++++++++|||||++++++.+.+. .
T Consensus 6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~---~ 82 (277)
T d1o6ya_ 6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETP---A 82 (277)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECS---S
T ss_pred cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccC---C
Confidence 467889999999999999999965 799999999986544332 468899999999999999999999976432 2
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
....|+|||||++|+|.+++...+ .+++.++..++.||++||+|||+. +|+||||||+|||++.++..+++|||.+
T Consensus 83 ~~~~~lvmE~~~g~~L~~~~~~~~-~l~~~~~~~i~~qi~~al~~lH~~---~iiHrDiKP~NIll~~~~~~~l~d~~~~ 158 (277)
T d1o6ya_ 83 GPLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIA 158 (277)
T ss_dssp SEEEEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTSCEEECCCTTC
T ss_pred CceEEEEEECCCCCEehhhhcccC-CCCHHHHHHHHHHHHHHHHHHHhC---CccCccccCcccccCccccceeehhhhh
Confidence 345799999999999999887554 699999999999999999999998 9999999999999999999999999988
Q ss_pred hhhhcc-----CCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccccccccc
Q 004195 635 LLAEAR-----GKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTDEARK 708 (769)
Q Consensus 635 ~~~~~~-----~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~ 708 (769)
+..... ......++..|++||.+.+..+++++|||||||++|||+||++||....... ....+.....
T Consensus 159 ~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~------ 232 (277)
T d1o6ya_ 159 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPI------ 232 (277)
T ss_dssp EECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCC------
T ss_pred hhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCC------
Confidence 543222 1223345678899999988899999999999999999999999997654332 2222211100
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCC-CHHHHHHHhHh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRP-SVEDTLWNLQF 754 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~l~~ 754 (769)
.........++ ++.+++.+||+.||++|| |++++++.+..
T Consensus 233 --~~~~~~~~~s~----~l~~li~~~L~~dp~~R~~sa~~l~~~l~r 273 (277)
T d1o6ya_ 233 --PPSARHEGLSA----DLDAVVLKALAKNPENRYQTAAEMRADLVR 273 (277)
T ss_dssp --CGGGTSSSCCH----HHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred --CCchhccCCCH----HHHHHHHHHccCCHhHCHhHHHHHHHHHHH
Confidence 00111123344 488999999999999999 78888776654
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-45 Score=386.63 Aligned_cols=274 Identities=18% Similarity=0.270 Sum_probs=207.5
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-C-CcEEEEEEccccCC--CChhHHHHHHHHHhhc---cCCceeeEeeeeeccCC
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-D-GTLVAIRSLKMSKK--SSPHMYTYHIELISKL---RHSNLVSALGHCLDFSL 550 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~-g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l---~H~nIv~l~~~~~~~~~ 550 (769)
+.++|++.+.||+|+||+||+|+.. + ++.||||+++.... .....+.+|+.+++.+ +|||||+++++|.....
T Consensus 5 ~~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~ 84 (305)
T d1blxa_ 5 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 84 (305)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred CcCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccc
Confidence 3578999999999999999999964 4 67899999975432 2344677888888776 79999999999875332
Q ss_pred CCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecC
Q 004195 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINS 630 (769)
Q Consensus 551 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~D 630 (769)
......+++|||++++++..........+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+|
T Consensus 85 --~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~---~ivHrDiKp~NILi~~~~~~kl~d 159 (305)
T d1blxa_ 85 --DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLAD 159 (305)
T ss_dssp --SSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECS
T ss_pred --ccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecCCCccEEEEcCCCCeeecc
Confidence 124568999999998887766665556799999999999999999999999 999999999999999999999999
Q ss_pred CCCchhhhccC-CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhccc-ccccc
Q 004195 631 YNLPLLAEARG-KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIG-TDEAR 707 (769)
Q Consensus 631 FGla~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~-~~~~~ 707 (769)
||+++...... .....++..|++||.+.+..|+.++||||+||++|||+||++||...... ....+...... ....+
T Consensus 160 fg~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 239 (305)
T d1blxa_ 160 FGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 239 (305)
T ss_dssp CCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGS
T ss_pred hhhhhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcc
Confidence 99987553332 23445567888999999999999999999999999999999999765432 22222221110 00000
Q ss_pred cc-------cc---CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 708 KS-------IV---DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 708 ~~-------~~---d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.. .. .+.............+.+|+.+||+.||++|||++|+++|+||..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~ 298 (305)
T d1blxa_ 240 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 298 (305)
T ss_dssp CTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTT
T ss_pred cccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcC
Confidence 00 00 000001111122344889999999999999999999999999864
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-45 Score=384.94 Aligned_cols=249 Identities=22% Similarity=0.333 Sum_probs=194.9
Q ss_pred cCccccCCceeEEEEEeCC--C--cEEEEEEccccC-CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 485 SSFMCDASHGQIYKGKLTD--G--TLVAIRSLKMSK-KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 485 ~~~iG~G~~g~Vy~~~~~~--g--~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
.++||+|+||+||+|++.+ + ..||||+++... ....++|.+|++++++++|||||+++|+|.+.+ ...+
T Consensus 32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~------~~~~ 105 (311)
T d1r0pa_ 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE------GSPL 105 (311)
T ss_dssp EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETT------TEEE
T ss_pred ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecC------CceE
Confidence 4679999999999999753 2 368999997432 222367999999999999999999999987532 2479
Q ss_pred EEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhc
Q 004195 560 LIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEA 639 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~ 639 (769)
+|||||++|+|.+++......+++..+.+++.|+++||.|+|+. +|+||||||+|||+|+++.+||+|||+++....
T Consensus 106 lv~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~---~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~ 182 (311)
T d1r0pa_ 106 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 182 (311)
T ss_dssp EEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSSGGGCCTTT
T ss_pred EEEEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhccc---CcccCCccHHhEeECCCCCEEEecccchhhccc
Confidence 99999999999999987776889999999999999999999998 999999999999999999999999999976543
Q ss_pred cCC------cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchh-HHHHhhhhhccccccccccccC
Q 004195 640 RGK------GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVV-VLVKDLLQVNIGTDEARKSIVD 712 (769)
Q Consensus 640 ~~~------~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~d 712 (769)
... ....++..|++||.+....++.++|||||||++|||+||+.|+..... ......+... ..
T Consensus 183 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g----------~~ 252 (311)
T d1r0pa_ 183 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG----------RR 252 (311)
T ss_dssp TTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTT----------CC
T ss_pred cccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcC----------CC
Confidence 321 112234457889998889999999999999999999997766654321 1111111110 01
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 713 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
+.....+++ ++.+++.+||+.||++||+|.||++++..+.
T Consensus 253 ~~~p~~~~~----~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~ 292 (311)
T d1r0pa_ 253 LLQPEYCPD----PLYEVMLKCWHPKAEMRPSFSELVSRISAIF 292 (311)
T ss_dssp CCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCcccCcH----HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 111123333 4889999999999999999999999998664
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7e-46 Score=388.48 Aligned_cols=273 Identities=18% Similarity=0.252 Sum_probs=199.8
Q ss_pred CCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHH--HHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 481 CFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTY--HIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~--Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
+|...+.||+|+||+||+|++ +|+.||||+++... .+++.+ |+..+.+++|||||+++|+|.+.+. ....+
T Consensus 4 ~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~---~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~---~~~~~ 76 (303)
T d1vjya_ 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNG---TWTQL 76 (303)
T ss_dssp GEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECS---SSEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCC---cceEE
Confidence 455678899999999999997 58899999997432 334444 4555567899999999999986442 23468
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCC-----CCCccccCccccceeeCCCceeeecCCCC
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGI-----VPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
++|||||++|+|.+++++. .++|..+.+++.|+|+||+|+|+.. .++||||||||+|||+++++.+||+|||+
T Consensus 77 ~lv~Ey~~~g~L~~~l~~~--~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl 154 (303)
T d1vjya_ 77 WLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 154 (303)
T ss_dssp EEEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred EEEEecccCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCc
Confidence 9999999999999999865 5899999999999999999999742 35999999999999999999999999999
Q ss_pred chhhhccCC------cceeecCCCcchhhhccCC------CCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHh--hhhh
Q 004195 634 PLLAEARGK------GSAEVSSPAKKTSVLARTE------QDDKSDVYDIGIILIEIIVGRPITSENVVVLVKD--LLQV 699 (769)
Q Consensus 634 a~~~~~~~~------~~~~~~~~~~~pe~~~~~~------~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~--~~~~ 699 (769)
++....... ....++..|++||.+.... ++.|+|||||||++|||+||.+|+.......... ....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~ 234 (303)
T d1vjya_ 155 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS 234 (303)
T ss_dssp CEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCS
T ss_pred cccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccc
Confidence 976533221 2234566788899875432 5779999999999999999998764322110000 0000
Q ss_pred ccccccc----cccccCccccCCC-CHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcccc
Q 004195 700 NIGTDEA----RKSIVDPAVMNEC-SDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQGLK 762 (769)
Q Consensus 700 ~~~~~~~----~~~~~d~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~~~ 762 (769)
....... ..+..+|.+.... +.+....+.+++.+||+.||++|||+.||+++|....+.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~~~~ 302 (303)
T d1vjya_ 235 DPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGIK 302 (303)
T ss_dssp SCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHHHCCC
T ss_pred cchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHhcCCC
Confidence 0000000 0111223222222 2345567999999999999999999999999998877666554
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.3e-45 Score=381.49 Aligned_cols=253 Identities=20% Similarity=0.317 Sum_probs=198.2
Q ss_pred cCCCCcCccccCCceeEEEEEeCC--------CcEEEEEEccccCCC-ChhHHHHHHHHHhhc-cCCceeeEeeeeeccC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTD--------GTLVAIRSLKMSKKS-SPHMYTYHIELISKL-RHSNLVSALGHCLDFS 549 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~--------g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~ 549 (769)
++|+..+.||+|+||.||+|+... +..||||+++..... ...++.+|...+.++ +|||||+++++|.+..
T Consensus 13 ~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~ 92 (299)
T d1fgka_ 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 92 (299)
T ss_dssp GGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCC
Confidence 467778999999999999998531 347999999754322 236788899999888 7999999999998644
Q ss_pred CCCCCcceEEEEEeccCCCchhhhhcCCC---------------CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCcc
Q 004195 550 LDDPSISIIYLIFEYAPNETLRSFISGPG---------------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLK 614 (769)
Q Consensus 550 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlK 614 (769)
. .++|||||++|+|.+++.... ..+++.++++++.|++.||+|||+. +|||||||
T Consensus 93 ~-------~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~---~ivHrDiK 162 (299)
T d1fgka_ 93 P-------LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLA 162 (299)
T ss_dssp S-------CEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred e-------EEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhC---CEEeeeec
Confidence 3 799999999999999997332 3589999999999999999999999 99999999
Q ss_pred ccceeeCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCch
Q 004195 615 ITDVLLDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENV 689 (769)
Q Consensus 615 p~NILld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~ 689 (769)
|+|||++.++.+||+|||+++....... ....++..|++||.+....|++|+||||||||+|||+| |++||....
T Consensus 163 p~NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~ 242 (299)
T d1fgka_ 163 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 242 (299)
T ss_dssp GGGEEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred ccceeecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCC
Confidence 9999999999999999999976654332 22334556888999989999999999999999999998 688887655
Q ss_pred hHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 690 VVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
...+...+... ..+.....+++ ++.+++.+||+.||++|||+.||++.|+.+.
T Consensus 243 ~~~~~~~i~~~----------~~~~~p~~~~~----~l~~li~~cl~~dP~~Rps~~eil~~L~~i~ 295 (299)
T d1fgka_ 243 VEELFKLLKEG----------HRMDKPSNCTN----ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 295 (299)
T ss_dssp HHHHHHHHHTT----------CCCCCCSSCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcC----------CCCCCCccchH----HHHHHHHHHccCCHhHCcCHHHHHHHHHHHh
Confidence 44433322211 11222233444 4899999999999999999999999997653
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-45 Score=387.50 Aligned_cols=254 Identities=20% Similarity=0.251 Sum_probs=191.2
Q ss_pred cCCCCcCccccCCceeEEEEEeC------CCcEEEEEEccccCC-CChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT------DGTLVAIRSLKMSKK-SSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLD 551 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~ 551 (769)
++|+..+.||+|+||.||+|++. +++.||||+++.... ...+.+.+|..++.++ +|+|||.+++++.+.+.
T Consensus 13 ~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~- 91 (299)
T d1ywna1 13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG- 91 (299)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS-
T ss_pred HHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCC-
Confidence 56888899999999999999853 346899999975432 2245678888888877 68999999999875332
Q ss_pred CCCcceEEEEEeccCCCchhhhhcCC---------------CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCcccc
Q 004195 552 DPSISIIYLIFEYAPNETLRSFISGP---------------GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKIT 616 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~ 616 (769)
..++|||||++|+|.++++.. ...++|.++..++.||++||+|||++ +||||||||+
T Consensus 92 -----~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~ivHrDlKp~ 163 (299)
T d1ywna1 92 -----PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAAR 163 (299)
T ss_dssp -----CCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGG
T ss_pred -----eEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhC---CCcCCcCCcc
Confidence 379999999999999999622 23589999999999999999999999 9999999999
Q ss_pred ceeeCCCceeeecCCCCchhhhccC----CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCC-CCCCCch-h
Q 004195 617 DVLLDENFHVKINSYNLPLLAEARG----KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGR-PITSENV-V 690 (769)
Q Consensus 617 NILld~~~~~kl~DFGla~~~~~~~----~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~-~p~~~~~-~ 690 (769)
|||+++++++||+|||+|+...... .....++..|++||.+.+..++.++|||||||++|||+||. +||.... .
T Consensus 164 NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~ 243 (299)
T d1ywna1 164 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 243 (299)
T ss_dssp GEEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS
T ss_pred ceeECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHH
Confidence 9999999999999999997653322 12234556788999999999999999999999999999975 5665432 1
Q ss_pred HHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 691 VLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
..+...+... ..+.....+++ ++.+++.+||+.||++|||++||++|++...
T Consensus 244 ~~~~~~~~~~----------~~~~~~~~~~~----~l~~li~~cl~~dP~~Rpt~~eil~~L~~il 295 (299)
T d1ywna1 244 EEFCRRLKEG----------TRMRAPDYTTP----EMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 295 (299)
T ss_dssp HHHHHHHHHT----------CCCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHhcC----------CCCCCCccCCH----HHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 2222222111 11222223344 4889999999999999999999999998654
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-44 Score=379.62 Aligned_cols=252 Identities=19% Similarity=0.239 Sum_probs=199.7
Q ss_pred cCCCCcCccccCCceeEEEEEeC------CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT------DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD 552 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~ 552 (769)
++|+..+.||+|+||+||+|++. +++.||||+++.... .....|.+|++++++++|||||+++|+|.....
T Consensus 20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~-- 97 (308)
T d1p4oa_ 20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP-- 97 (308)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSS--
T ss_pred HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCc--
Confidence 46777899999999999999863 357899999975432 223468999999999999999999999976433
Q ss_pred CCcceEEEEEeccCCCchhhhhcC---------CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC
Q 004195 553 PSISIIYLIFEYAPNETLRSFISG---------PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN 623 (769)
Q Consensus 553 ~~~~~~~lV~Ey~~~gsL~~~l~~---------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~ 623 (769)
.++|||||++|+|.+++.. ....++|..+.+++.|+|+||+|||+. +|+||||||+|||+|++
T Consensus 98 -----~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~---~ivHrDlk~~NiLld~~ 169 (308)
T d1p4oa_ 98 -----TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 169 (308)
T ss_dssp -----CEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTT
T ss_pred -----eeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeeceEcCCceeecCC
Confidence 7999999999999998862 223579999999999999999999998 99999999999999999
Q ss_pred ceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCC-CCCCCchhHHHHhhhh
Q 004195 624 FHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGR-PITSENVVVLVKDLLQ 698 (769)
Q Consensus 624 ~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~-~p~~~~~~~~~~~~~~ 698 (769)
+++||+|||+|+....... ....++..|++||...+..++.++|||||||++|||+||+ +|+...........+.
T Consensus 170 ~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~ 249 (308)
T d1p4oa_ 170 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM 249 (308)
T ss_dssp CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHH
T ss_pred ceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 9999999999976543322 2223456678899998999999999999999999999985 6776544333222221
Q ss_pred hccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 699 VNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 699 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
.. . .+.....+++ .+.+++.+||+.||++||||+||++++...
T Consensus 250 ~~-----~-----~~~~p~~~~~----~l~~li~~cl~~~P~~RPs~~~il~~L~~~ 292 (308)
T d1p4oa_ 250 EG-----G-----LLDKPDNCPD----MLFELMRMCWQYNPKMRPSFLEIISSIKEE 292 (308)
T ss_dssp TT-----C-----CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred hC-----C-----CCCCcccchH----HHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence 10 0 1111223333 499999999999999999999999988754
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-44 Score=385.04 Aligned_cols=269 Identities=19% Similarity=0.275 Sum_probs=197.5
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
+|+..++||+|+||+||+|+.. +|+.||||++.... +...+|+++|++++|||||+++++|...... ....+++
T Consensus 21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~~~~~~~~~~~~-~~~~~~~ 95 (350)
T d1q5ka_ 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEK-KDEVYLN 95 (350)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----SSCCHHHHHHHHCCCTTBCCEEEEEEEC--C-CSCCEEE
T ss_pred CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccc----hHHHHHHHHHHhcCCCCCCcEEEEEEecCcc-CCceEEE
Confidence 4777899999999999999976 79999999997543 2345799999999999999999999754321 2345689
Q ss_pred EEEeccCCCchhhhhc--CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc-eeeecCCCCchh
Q 004195 560 LIFEYAPNETLRSFIS--GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF-HVKINSYNLPLL 636 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~-~~kl~DFGla~~ 636 (769)
+|||||+++.+..+.. .....+++.++..++.||++||+|||++ +|+||||||+|||++.++ .+||+|||+++.
T Consensus 96 lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~---~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~ 172 (350)
T d1q5ka_ 96 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172 (350)
T ss_dssp EEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTTCCEEECCCTTCEE
T ss_pred EEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhc---CCcccCCCcceEEEecCCCceeEecccchhh
Confidence 9999998764444332 3344799999999999999999999998 999999999999999775 899999999976
Q ss_pred hhccC-CcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccc-ccccc-----
Q 004195 637 AEARG-KGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIG-TDEAR----- 707 (769)
Q Consensus 637 ~~~~~-~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~-~~~~~----- 707 (769)
..... .....++..|++||.+.+ ..++.++||||+||++|||++|++||....... ...+...... ..+.+
T Consensus 173 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~ 252 (350)
T d1q5ka_ 173 LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 252 (350)
T ss_dssp CCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC
T ss_pred ccCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhcc
Confidence 54332 333445667788887654 578999999999999999999999997654322 2222111000 00000
Q ss_pred -------ccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 708 -------KSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 708 -------~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.............+....++.+|+.+||+.||++|||+.|+++|+||...
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~ 309 (350)
T d1q5ka_ 253 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309 (350)
T ss_dssp ---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred chhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccc
Confidence 00000000001111223348899999999999999999999999999753
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6e-45 Score=383.30 Aligned_cols=252 Identities=18% Similarity=0.264 Sum_probs=200.0
Q ss_pred cCCCCcCccccCCceeEEEEEe------CCCcEEEEEEccccCCC-ChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKL------TDGTLVAIRSLKMSKKS-SPHMYTYHIELISKL-RHSNLVSALGHCLDFSLD 551 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~ 551 (769)
++|+..+.||+|+||.||+|++ .+++.||||+++..... ...++.+|+.+++++ +|||||+++|+|.+...
T Consensus 23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~- 101 (311)
T d1t46a_ 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP- 101 (311)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS-
T ss_pred HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCE-
Confidence 4677789999999999999985 24678999999764322 235688999999999 69999999999986543
Q ss_pred CCCcceEEEEEeccCCCchhhhhcCC-----------------CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCcc
Q 004195 552 DPSISIIYLIFEYAPNETLRSFISGP-----------------GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLK 614 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~~~-----------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlK 614 (769)
.++|||||++|+|.+++++. ...+++..+.+++.||++||+|||++ +|||||||
T Consensus 102 ------~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~---~ivHrDLK 172 (311)
T d1t46a_ 102 ------TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLA 172 (311)
T ss_dssp ------CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred ------EEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---Ceeecccc
Confidence 79999999999999998632 22589999999999999999999999 99999999
Q ss_pred ccceeeCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCch
Q 004195 615 ITDVLLDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENV 689 (769)
Q Consensus 615 p~NILld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~ 689 (769)
|+||+++.++.+|++|||+++....... ....++..|++||.+....++.++|||||||++|||+| |++|+....
T Consensus 173 p~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~ 252 (311)
T d1t46a_ 173 ARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP 252 (311)
T ss_dssp GGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred cccccccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCC
Confidence 9999999999999999999976643322 22344566788999988999999999999999999999 566665432
Q ss_pred h-HHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 690 V-VLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 690 ~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
. ..+..++.... .+......+ ..+.+|+.+||+.||++||||+||++.++.+
T Consensus 253 ~~~~~~~~i~~~~----------~~~~~~~~~----~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~ 305 (311)
T d1t46a_ 253 VDSKFYKMIKEGF----------RMLSPEHAP----AEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 305 (311)
T ss_dssp SSHHHHHHHHHTC----------CCCCCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCC----------CCCCccccc----HHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence 2 22333322211 111112233 3489999999999999999999999988743
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.7e-43 Score=370.88 Aligned_cols=275 Identities=16% Similarity=0.249 Sum_probs=198.7
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC--CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCC-CCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK--KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLD-DPS 554 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~-~~~ 554 (769)
.++|+..+.||+|+||+||+|+.. +|+.||||++.... ....+++.+|+++|++++||||+++++++...... ...
T Consensus 9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~ 88 (318)
T d3blha1 9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 88 (318)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence 367889999999999999999975 79999999987553 23346789999999999999999999998653321 112
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
..+.++||||++++.+..... ....++...++.++.|+++||+|||+. +|+||||||+|||++.++.+|++|||++
T Consensus 89 ~~~~~iv~e~~~~~~~~~~~~-~~~~~~~~~~~~i~~qil~~l~~lH~~---~ivHrDlKp~NILl~~~~~~kl~dfg~~ 164 (318)
T d3blha1 89 KGSIYLVFDFCEHDLAGLLSN-VLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLA 164 (318)
T ss_dssp --CEEEEEECCCEEHHHHHTC-TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEeccCCCccchhhh-cccccccHHHHHHHHHHHHHHHHhccC---CEEecCcCchheeecCCCcEEeeeccee
Confidence 346899999998776665544 334789999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhccC------CcceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccc-cccc
Q 004195 635 LLAEARG------KGSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIG-TDEA 706 (769)
Q Consensus 635 ~~~~~~~------~~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~-~~~~ 706 (769)
+...... .....++..|++||.+.+. .+++++||||+||++|||+||++||.+.........+..... ....
T Consensus 165 ~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 244 (318)
T d3blha1 165 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 244 (318)
T ss_dssp EECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred eecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChh
Confidence 6543221 1222345667889987654 689999999999999999999999976543332222211111 1110
Q ss_pred -cccccC---------ccccCCCCHH------HHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 707 -RKSIVD---------PAVMNECSDE------SLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 707 -~~~~~d---------~~~~~~~~~~------~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
...... .........+ ....+.+|+.+||+.||++|||++|+++|+||...
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~~ 311 (318)
T d3blha1 245 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD 311 (318)
T ss_dssp TSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSSS
T ss_pred hccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhccC
Confidence 000000 0000000111 12357889999999999999999999999999743
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-43 Score=376.46 Aligned_cols=273 Identities=15% Similarity=0.238 Sum_probs=197.2
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
+++|+..+.||+|+||+||+|+.. +|+.||||+++.... ...+.+.+|+++|++++|||||++++++...... ...
T Consensus 7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~--~~~ 84 (345)
T d1pmea_ 7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIE--QMK 84 (345)
T ss_dssp CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTT--TCC
T ss_pred CCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeecccc--ccc
Confidence 456888999999999999999964 899999999975432 2235788999999999999999999999764431 122
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..+++ ||+.+|+|.+++... .+++..+..++.|++.||+|||++ +||||||||+|||++.++.+||+|||+|+.
T Consensus 85 ~~~l~-~~~~~g~L~~~l~~~--~l~~~~i~~i~~qil~al~yLH~~---~iiHRDIKp~NILl~~~~~~kl~DfG~a~~ 158 (345)
T d1pmea_ 85 DVYLV-THLMGADLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARV 158 (345)
T ss_dssp CEEEE-EECCCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEE-EeecCCchhhhhhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCcceEEECCCCCEEEcccCceee
Confidence 34554 566689999999754 589999999999999999999999 999999999999999999999999999965
Q ss_pred hhccC-----CcceeecCCCcchhhhc-cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccc--cc-
Q 004195 637 AEARG-----KGSAEVSSPAKKTSVLA-RTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDE--AR- 707 (769)
Q Consensus 637 ~~~~~-----~~~~~~~~~~~~pe~~~-~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~--~~- 707 (769)
..... .....++..|++||.+. ...++.++||||+||++|||++|++||.................... ..
T Consensus 159 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (345)
T d1pmea_ 159 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 238 (345)
T ss_dssp CCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHH
T ss_pred ccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhh
Confidence 43321 12233455677888764 44678999999999999999999999976543222111111000000 00
Q ss_pred --------ccc-cCccccC----CCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 708 --------KSI-VDPAVMN----ECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 708 --------~~~-~d~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
... ..+.... ...+....++.+++.+||+.||++|||++|+++|+|+.....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~~~ 303 (345)
T d1pmea_ 239 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 303 (345)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTTCC
T ss_pred hhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccCCC
Confidence 000 0000000 000111234889999999999999999999999999875443
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-43 Score=367.86 Aligned_cols=266 Identities=18% Similarity=0.233 Sum_probs=200.5
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
++|+..+.||+|+||+||+|+.. +|+.||||+++..... ..+.+.+|+.++++++|||||+++++|.+..
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~------- 74 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDK------- 74 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-------
T ss_pred CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeecccccccc-------
Confidence 57888999999999999999975 7999999999755332 2467899999999999999999999998744
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++|+||+.++++..++...+ .+++..+..++.|+++||+|||++ +|+||||||+|||++.++.+|++|||.++.
T Consensus 75 ~~~iv~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~q~~~aL~~lH~~---~IvHrDiKP~NIli~~~~~~kl~DFG~a~~ 150 (292)
T d1unla_ 75 KLTLVFEFCDQDLKKYFDSCNG-DLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARA 150 (292)
T ss_dssp EEEEEEECCSEEHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred ceeEEeeecccccccccccccc-ccchhHHHHHHHHHHHHHHHhhcC---CEeeecccCcccccccCCceeeeecchhhc
Confidence 3899999999999988887554 689999999999999999999999 999999999999999999999999999976
Q ss_pred hhccCC-c-ceeecCCCcchhhhccCC-CCCCCCeeehhHHHHHHHhCCCCCCC-ch-hHHHHhhhhhcccccc-cc---
Q 004195 637 AEARGK-G-SAEVSSPAKKTSVLARTE-QDDKSDVYDIGIILIEIIVGRPITSE-NV-VVLVKDLLQVNIGTDE-AR--- 707 (769)
Q Consensus 637 ~~~~~~-~-~~~~~~~~~~pe~~~~~~-~~~ksDVwS~Gvil~elltG~~p~~~-~~-~~~~~~~~~~~~~~~~-~~--- 707 (769)
...... . .......+++||.+.... ++.++||||+||++|||++|+.||.. .. .+.............+ .+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (292)
T d1unla_ 151 FGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSM 230 (292)
T ss_dssp CCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTG
T ss_pred ccCCCccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhh
Confidence 543322 1 122334456677665554 69999999999999999999987543 22 2222221111111000 00
Q ss_pred ccccC---------ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 708 KSIVD---------PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 708 ~~~~d---------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
....+ ..-...........+.+|+.+|++.||++|||++|+++|+||.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~ 288 (292)
T d1unla_ 231 TKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288 (292)
T ss_dssp GGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSS
T ss_pred hhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhcC
Confidence 00000 00001112223345889999999999999999999999999964
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=7.6e-43 Score=370.85 Aligned_cols=263 Identities=16% Similarity=0.195 Sum_probs=198.7
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhcc-CCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLR-HSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|+..+.||+|+||+||+|+.. +|+.||||+++. ...+++.+|+++|++++ ||||+++++++.... ...
T Consensus 35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~---~~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~-----~~~ 106 (328)
T d3bqca1 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP---VKKKKIKREIKILENLRGGPNIITLADIVKDPV-----SRT 106 (328)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS---SCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTT-----TCS
T ss_pred cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECH---HHHHHHHHHHHHHHhccCCCCCcEEEEEEEecC-----CCc
Confidence 57999999999999999999975 799999999974 34578999999999995 999999999987532 234
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC-ceeeecCCCCchh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN-FHVKINSYNLPLL 636 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~-~~~kl~DFGla~~ 636 (769)
.++|||||++|+|..+.+ .+++..+..++.||++||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.
T Consensus 107 ~~~v~e~~~~~~L~~~~~----~l~e~~i~~i~~qil~aL~~LH~~---gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~ 179 (328)
T d3bqca1 107 PALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 179 (328)
T ss_dssp EEEEEECCCSCBGGGTTT----SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCGGGCEE
T ss_pred eeEEEeecCCCcHHHHhc----CCCHHHHHHHHHHHHHHHHHHhhc---ccccccccccceEEcCCCCeeeeccccccee
Confidence 899999999999987753 589999999999999999999999 99999999999999865 4699999999976
Q ss_pred hhccC-CcceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchhHH--HHhhhhh-------------
Q 004195 637 AEARG-KGSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVVVL--VKDLLQV------------- 699 (769)
Q Consensus 637 ~~~~~-~~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~--~~~~~~~------------- 699 (769)
..... .....++..+++||...+. .++.++||||+||++|||++|+.||....... .......
T Consensus 180 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 259 (328)
T d3bqca1 180 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY 259 (328)
T ss_dssp CCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHT
T ss_pred ccCCCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhc
Confidence 54433 2333445567889987654 47999999999999999999999986532111 1110000
Q ss_pred ccccccccccccCc--------cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 700 NIGTDEARKSIVDP--------AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 700 ~~~~~~~~~~~~d~--------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.............. ............++.+|+.+||+.||++|||++|+++|+||...
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v 325 (328)
T d3bqca1 260 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 325 (328)
T ss_dssp TCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTS
T ss_pred ccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence 00000000000000 00000111223458899999999999999999999999999754
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-42 Score=372.62 Aligned_cols=269 Identities=16% Similarity=0.230 Sum_probs=197.6
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.++|+..+.||+|+||+||+|+.. +|+.||||+++...... .+.+.+|+++|++++|||||+++++|...+.. ...
T Consensus 17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~-~~~ 95 (346)
T d1cm8a_ 17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETL-DDF 95 (346)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSST-TTC
T ss_pred CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccc-ccc
Confidence 357888999999999999999975 79999999997543222 35688999999999999999999999764421 123
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
.++++||||+ +++|..+++.. .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+|++|||+|+
T Consensus 96 ~~~~lv~e~~-~~~l~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~ 169 (346)
T d1cm8a_ 96 TDFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLAR 169 (346)
T ss_dssp CCCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred ceEEEEEecc-cccHHHHHHhc--cccHHHHHHHHHHHHHHHHHHHhC---CCcccccCcchhhccccccccccccccee
Confidence 3579999999 56888887643 599999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccCCcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHh-hhhhccccccc-------
Q 004195 636 LAEARGKGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKD-LLQVNIGTDEA------- 706 (769)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~-~~~~~~~~~~~------- 706 (769)
...... ....++..|++||.+.+ ..++.++||||+||++|||++|++||.......... ...........
T Consensus 170 ~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (346)
T d1cm8a_ 170 QADSEM-TGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQS 248 (346)
T ss_dssp ECCSSC-CSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSC
T ss_pred ccCCcc-ccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcc
Confidence 664433 33445567788998765 456999999999999999999999997654322211 11110000000
Q ss_pred ---------cccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 707 ---------RKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 707 ---------~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
..+...... ....+.....+.+|+.+||+.||++|||++|+++|+||..
T Consensus 249 ~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~ 306 (346)
T d1cm8a_ 249 DEAKNYMKGLPELEKKDF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFES 306 (346)
T ss_dssp HHHHHHHHHSCCCCCCCG-GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTT
T ss_pred hhhhhhhccCCcccccch-HHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCc
Confidence 000000000 0111112234889999999999999999999999999975
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-43 Score=372.06 Aligned_cols=254 Identities=18% Similarity=0.241 Sum_probs=198.8
Q ss_pred cCCCCcCccccCCceeEEEEEeC----CCcEEEEEEccccC----CCChhHHHHHHHHHhhccC-CceeeEeeeeeccCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT----DGTLVAIRSLKMSK----KSSPHMYTYHIELISKLRH-SNLVSALGHCLDFSL 550 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~----~g~~vAvK~~~~~~----~~~~~~~~~Ei~~l~~l~H-~nIv~l~~~~~~~~~ 550 (769)
++|+..+.||+|+||+||+|+.. +|+.||||.++... ....+.+.+|++++++++| |||+++++++.+..
T Consensus 24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~- 102 (322)
T d1vzoa_ 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET- 102 (322)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT-
T ss_pred hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCC-
Confidence 56889999999999999999852 48899999987532 2335678899999999976 89999999998744
Q ss_pred CCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecC
Q 004195 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINS 630 (769)
Q Consensus 551 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~D 630 (769)
..++||||+.+|+|.+++...+ .++......++.|++.||+|+|+. +|+||||||+|||++.++.+||+|
T Consensus 103 ------~~~~v~e~~~~~~L~~~i~~~~-~~~e~~~~~~~~Qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~vkL~D 172 (322)
T d1vzoa_ 103 ------KLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTD 172 (322)
T ss_dssp ------EEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESC
T ss_pred ------ceeeeeecccccHHHHHHHhcc-cccHHHHHHHHHHHHHHHHHhhcC---CEEeccCCccceeecCCCCEEEee
Confidence 3899999999999999998554 567888999999999999999999 999999999999999999999999
Q ss_pred CCCchhhhccC---CcceeecCCCcchhhhccC--CCCCCCCeeehhHHHHHHHhCCCCCCCchhHHH-Hhhhhhccccc
Q 004195 631 YNLPLLAEARG---KGSAEVSSPAKKTSVLART--EQDDKSDVYDIGIILIEIIVGRPITSENVVVLV-KDLLQVNIGTD 704 (769)
Q Consensus 631 FGla~~~~~~~---~~~~~~~~~~~~pe~~~~~--~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~ 704 (769)
||+++...... .....++..+++||.+... .++.++||||+||+||||+||+.||........ ..+......
T Consensus 173 FG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~-- 250 (322)
T d1vzoa_ 173 FGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK-- 250 (322)
T ss_dssp SSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHH--
T ss_pred ccchhhhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhccc--
Confidence 99996543222 2233455677788887654 468899999999999999999999965432211 111111100
Q ss_pred cccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCC-----CHHHHHHHhHhhh
Q 004195 705 EARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRP-----SVEDTLWNLQFAT 756 (769)
Q Consensus 705 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~~~~ 756 (769)
..+.+...+++ ++.+++.+||++||++|| |++|+++|+||..
T Consensus 251 ------~~~~~~~~~s~----~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~ 297 (322)
T d1vzoa_ 251 ------SEPPYPQEMSA----LAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK 297 (322)
T ss_dssp ------CCCCCCTTSCH----HHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTT
T ss_pred ------CCCCCcccCCH----HHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcC
Confidence 01222223344 489999999999999999 5899999999865
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-42 Score=368.42 Aligned_cols=269 Identities=14% Similarity=0.179 Sum_probs=196.4
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
++|++.+.||+|+||+||+|+.. +|+.||||++....... .+.+.+|+.++++++|||||+++++|...... +...
T Consensus 17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~-~~~~ 95 (355)
T d2b1pa1 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL-EEFQ 95 (355)
T ss_dssp TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCST-TTCC
T ss_pred CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEeccccc-ccCc
Confidence 57888999999999999999976 79999999997553322 24688999999999999999999999754321 2346
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
+.|+|||||.++.+ +.+.. .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+|++|||+++.
T Consensus 96 ~~~iv~Ey~~~~l~-~~~~~---~~~~~~i~~~~~qil~gl~~LH~~---giiHrDlKP~Nil~~~~~~~kl~df~~~~~ 168 (355)
T d2b1pa1 96 DVYLVMELMDANLC-QVIQM---ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART 168 (355)
T ss_dssp EEEEEEECCSEEHH-HHHTS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred eeEEEEeccchHHH-Hhhhc---CCCHHHHHHHHHHHHHHHHHhhhc---ccccccCCccccccccccceeeechhhhhc
Confidence 78999999976544 44432 589999999999999999999999 999999999999999999999999999876
Q ss_pred hhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHH-Hhhhhhcccccc---------
Q 004195 637 AEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLV-KDLLQVNIGTDE--------- 705 (769)
Q Consensus 637 ~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~~--------- 705 (769)
...... ....++..|++||.+.+..+++++||||+||++|||++|++||.+...... ............
T Consensus 169 ~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 248 (355)
T d2b1pa1 169 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 248 (355)
T ss_dssp ------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHH
T ss_pred cccccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhh
Confidence 544333 233455678899999888999999999999999999999999965432221 111111000000
Q ss_pred --------------ccccccCccccCC---CCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 706 --------------ARKSIVDPAVMNE---CSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 706 --------------~~~~~~d~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
............. ........+.+|+.+|++.||++|||++|+++|+|+..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~ 316 (355)
T d2b1pa1 249 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 316 (355)
T ss_dssp HHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred HHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence 0000111111111 12235667999999999999999999999999999975
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.5e-42 Score=367.55 Aligned_cols=271 Identities=15% Similarity=0.188 Sum_probs=198.5
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.++|+..+.||+|+||+||+|+.. +|+.||||+++...... .+.+.+|++++++++|||||++++++......+ .
T Consensus 17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~--~ 94 (348)
T d2gfsa1 17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE--E 94 (348)
T ss_dssp ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTT--T
T ss_pred CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccc--c
Confidence 567999999999999999999965 79999999998653322 346889999999999999999999986533211 1
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
...++++||+.+|+|.+++... .+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+|++|||++.
T Consensus 95 ~~~~~i~~~~~gg~L~~~~~~~--~l~e~~~~~i~~qil~aL~~LH~~---giiHrDiKp~NILi~~~~~~kl~dfg~a~ 169 (348)
T d2gfsa1 95 FNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 169 (348)
T ss_dssp CCCCEEEEECCSEEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCC----
T ss_pred CceEEEEEeecCCchhhhcccc--cccHHHHHHHHHHHHHHHHHHHhC---CCcccccCCccccccccccccccccchhc
Confidence 2245667778899999999754 599999999999999999999999 99999999999999999999999999986
Q ss_pred hhhccCCcceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccc-cccccc----
Q 004195 636 LAEARGKGSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGT-DEARKS---- 709 (769)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~-~~~~~~---- 709 (769)
....... ...++..+++||...+. .++.++||||+||++|||++|++||...........+...... ......
T Consensus 170 ~~~~~~~-~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 248 (348)
T d2gfsa1 170 HTDDEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 248 (348)
T ss_dssp CCTGGGS-SSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCC
T ss_pred ccCcccc-cccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccc
Confidence 6543332 23345567788876554 4689999999999999999999999765433222211111111 000000
Q ss_pred -----ccC--ccccCC----CCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 710 -----IVD--PAVMNE----CSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 710 -----~~d--~~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
... +..... .......++.+|+.+||+.||++|||++|+++|+||.+-
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~ 307 (348)
T d2gfsa1 249 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 307 (348)
T ss_dssp HHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred hhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCC
Confidence 000 000000 000122348899999999999999999999999999753
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=100.00 E-value=3.6e-41 Score=355.75 Aligned_cols=295 Identities=27% Similarity=0.362 Sum_probs=231.2
Q ss_pred cCCHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCC--CCCCCCcceEecCC----CeeEEEeCCCCCCCCCCCCCCCCC
Q 004195 27 QLQLFQYQTLVRIQQLLNYPSVSSSFNTTTVTDFCN--IEPTPSLTLVCYED----NLTQLHIAGDNNNNINGGLAHNFS 100 (769)
Q Consensus 27 ~~~~~~~~~ll~~k~~~~~~~~l~~w~~~~~~~~c~--~~~~~~~~v~C~~~----~v~~l~l~~~~~~~~~~~l~~n~~ 100 (769)
-|.++|++||++||+.+.+|..+++|..++ |||. |.| |+|+.. +|++|+++++.+.+.
T Consensus 2 ~c~~~e~~aLl~~k~~~~~~~~l~sW~~~~--d~C~~~w~g-----v~C~~~~~~~~v~~L~L~~~~l~g~--------- 65 (313)
T d1ogqa_ 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTT--DCCNRTWLG-----VLCDTDTQTYRVNNLDLSGLNLPKP--------- 65 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTS--CTTTTCSTT-----EEECCSSSCCCEEEEEEECCCCSSC---------
T ss_pred CCCHHHHHHHHHHHHHCCCCCcCCCCCCCC--CCCCCcCCC-----eEEeCCCCcEEEEEEECCCCCCCCC---------
Confidence 478999999999999999998899998766 9994 874 999642 699999988655431
Q ss_pred CCccccccCCCCCCcEEEeec-ccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCcc
Q 004195 101 TDTFFSTLGSLSSLKVLSLVS-LGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSE 179 (769)
Q Consensus 101 ~~~~~~~~~~l~~L~~L~L~~-n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 179 (769)
..+|+.+++|++|++|+|++ |+++|.+|..|++|++|++|+|++|++.+..|..+..+.+|+.+++++|.+.+.+|.+
T Consensus 66 -~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~ 144 (313)
T d1ogqa_ 66 -YPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPS 144 (313)
T ss_dssp -EECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGG
T ss_pred -CCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchh
Confidence 13567888999999999986 7888889999999999999999999999888888888999999999999988888999
Q ss_pred CcCCcCCCEEeccCCCCcccCCccccCCCCC-CEEEccCccccccCCC-CCCCccCcEEeccCCcCCCCCcccccCCcEE
Q 004195 180 LSLLQVLSVLSLKNNSLSGFLPVSLTGLQSL-RVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTL 257 (769)
Q Consensus 180 ~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L-~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L 257 (769)
|+++++|+.+++++|.++|.+|..++.+.++ +.++++.|++++..|. +..+. +. .+
T Consensus 145 l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~-~~---------------------~l 202 (313)
T d1ogqa_ 145 ISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LA---------------------FV 202 (313)
T ss_dssp GGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CS---------------------EE
T ss_pred hccCcccceeeccccccccccccccccccccccccccccccccccccccccccc-cc---------------------cc
Confidence 9999999999999999988888888888776 7888888888887765 33322 22 34
Q ss_pred EeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcC
Q 004195 258 VLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLL 337 (769)
Q Consensus 258 ~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l 337 (769)
++++|.+.+.+ |..+..+++|+.|++++|.+.+.+ +.+..+++|+.|+|++|+++|.+|..++++++|++|||++|+|
T Consensus 203 ~l~~~~~~~~~-~~~~~~~~~l~~l~~~~~~l~~~~-~~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l 280 (313)
T d1ogqa_ 203 DLSRNMLEGDA-SVLFGSDKNTQKIHLAKNSLAFDL-GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNL 280 (313)
T ss_dssp ECCSSEEEECC-GGGCCTTSCCSEEECCSSEECCBG-GGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEE
T ss_pred ccccccccccc-cccccccccccccccccccccccc-cccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcc
Confidence 44455555554 666677777777777777777654 3567777777788888887777777777777788888888888
Q ss_pred CCCCCccccccCCCceEECCCCC-CCh
Q 004195 338 TGYLPSCLQVEAKTRLVLYSKNC-LSN 363 (769)
Q Consensus 338 ~g~~p~~~~~~~~l~~l~l~~N~-l~~ 363 (769)
+|.+|. +..+++++.+++++|. +.|
T Consensus 281 ~g~iP~-~~~L~~L~~l~l~~N~~l~g 306 (313)
T d1ogqa_ 281 CGEIPQ-GGNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp EEECCC-STTGGGSCGGGTCSSSEEES
T ss_pred cccCCC-cccCCCCCHHHhCCCccccC
Confidence 777775 3556677777777774 444
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=3.1e-41 Score=353.51 Aligned_cols=255 Identities=13% Similarity=0.117 Sum_probs=189.6
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
++|+..+.||+|+||+||+|+.. +|+.||||++.... ..+++.+|++++++++|+|+|..++.|... .+..
T Consensus 7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~------~~~~ 78 (299)
T d1ckia_ 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAE------GDYN 78 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT--TSCCHHHHHHHHHHSTTSTTCCCEEEEEEE------TTEE
T ss_pred CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc--cCHHHHHHHHHHHHccCCCcccEEEEEEec------CCEE
Confidence 46888999999999999999975 79999999987543 335688999999999887766665555432 2348
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeC---CCceeeecCCCCch
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD---ENFHVKINSYNLPL 635 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld---~~~~~kl~DFGla~ 635 (769)
++||||+. |++.+.+......+++..+..++.|+++||+|||+. +|+||||||+|||++ .+..+|++|||+|+
T Consensus 79 ~ivme~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~ 154 (299)
T d1ckia_ 79 VMVMELLG-PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 154 (299)
T ss_dssp EEEEECCC-CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCSSCE
T ss_pred EEEEEEcC-CchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHhhccccccCCCceeeeeccCcce
Confidence 99999995 577776664455799999999999999999999999 999999999999875 35579999999997
Q ss_pred hhhccC---------CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccc
Q 004195 636 LAEARG---------KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEA 706 (769)
Q Consensus 636 ~~~~~~---------~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (769)
...... .....++..|++||...+..++.++|||||||++|||+||+.||................. .
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~---~ 231 (299)
T d1ckia_ 155 KYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISE---K 231 (299)
T ss_dssp ECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHH---H
T ss_pred eccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhc---c
Confidence 654322 1223456778899999888999999999999999999999999975432221111100000 0
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 707 RKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 707 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
......+.....++++ +.+++.+||+.+|++||+++++.+.++
T Consensus 232 ~~~~~~~~~~~~~p~~----~~~li~~cl~~~p~~RP~~~~i~~~l~ 274 (299)
T d1ckia_ 232 KMSTPIEVLCKGYPSE----FATYLNFCRSLRFDDKPDYSYLRQLFR 274 (299)
T ss_dssp HHHSCHHHHTTTSCHH----HHHHHHHHHHSCTTCCCCHHHHHHHHH
T ss_pred cCCCChhHhccCCCHH----HHHHHHHHccCChhHCcCHHHHHHHHH
Confidence 0000011122334444 889999999999999999987765444
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=1.4e-40 Score=346.59 Aligned_cols=259 Identities=11% Similarity=0.059 Sum_probs=200.6
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccC-CceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRH-SNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H-~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|++.+.||+|+||+||+|+.. +|+.||||++.... ....+.+|+++++.++| +|++.+++++.+.. .
T Consensus 5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~-------~ 75 (293)
T d1csna_ 5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGL-------H 75 (293)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETT-------E
T ss_pred CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCC-------c
Confidence 57888999999999999999965 79999999886432 33568889999999965 89999999987643 4
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC-----CceeeecCCC
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE-----NFHVKINSYN 632 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~-----~~~~kl~DFG 632 (769)
.++||||+ +|+|.+++...+..+++.++..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||
T Consensus 76 ~~~vme~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~---giiHrDiKp~Nili~~~~~~~~~~vkl~DFG 151 (293)
T d1csna_ 76 NVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFG 151 (293)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCT
T ss_pred cEEEEEec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHC---CceeccCCccceeecCcccccCCceEEcccc
Confidence 89999999 6899999986666799999999999999999999999 9999999999999964 5789999999
Q ss_pred CchhhhccC---------CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhH----HHHhhhhh
Q 004195 633 LPLLAEARG---------KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVV----LVKDLLQV 699 (769)
Q Consensus 633 la~~~~~~~---------~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~----~~~~~~~~ 699 (769)
+|+...... .....++..|++||.+.+..++.++|||||||++|||+||+.||...... ....+...
T Consensus 152 ~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~ 231 (293)
T d1csna_ 152 MVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEK 231 (293)
T ss_dssp TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHH
T ss_pred eeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhc
Confidence 997653321 12234567789999999889999999999999999999999999743221 11111111
Q ss_pred ccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcccc
Q 004195 700 NIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQGLK 762 (769)
Q Consensus 700 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~~~ 762 (769)
.. ....+.+...++++ +.+++..|+..+|++||+++.+.+.+....+..+..
T Consensus 232 ~~-------~~~~~~l~~~~p~~----l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~~~~~ 283 (293)
T d1csna_ 232 KQ-------STPLRELCAGFPEE----FYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTT 283 (293)
T ss_dssp HH-------HSCHHHHTTTSCHH----HHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred cC-------CCChHHhcCCCCHH----HHHHHHHHhcCCcccCcCHHHHHHHHHHHHHHcCCC
Confidence 00 00011122334443 888999999999999999998887766554433333
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=4.5e-38 Score=339.02 Aligned_cols=266 Identities=11% Similarity=0.148 Sum_probs=192.7
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhcc-----------CCceeeEeeeeecc
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLR-----------HSNLVSALGHCLDF 548 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-----------H~nIv~l~~~~~~~ 548 (769)
+|+..+.||+|+||+||+|+.. +|+.||||+++... ...+.+.+|++++++++ |+|||++++++...
T Consensus 14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~ 92 (362)
T d1q8ya_ 14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK 92 (362)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence 4888999999999999999975 79999999997532 12356788999998875 57899999988653
Q ss_pred CCCCCCcceEEEEEeccCCCchhh--hhcCCCCCCCHHHHHHHHHHHHHHhccccc-CCCCCccccCccccceeeCCCc-
Q 004195 549 SLDDPSISIIYLIFEYAPNETLRS--FISGPGYKLTWVQRIAAAIAIVKGVQFLHT-GIVPGVFSNNLKITDVLLDENF- 624 (769)
Q Consensus 549 ~~~~~~~~~~~lV~Ey~~~gsL~~--~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlKp~NILld~~~- 624 (769)
.. ...+++|+++..+.... ........+++..+..++.||++||+|||+ . +|+||||||+|||++.++
T Consensus 93 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~---~IvHrDlKp~NIll~~~~~ 164 (362)
T d1q8ya_ 93 GP-----NGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC---GIIHTDIKPENVLMEIVDS 164 (362)
T ss_dssp ET-----TEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT---CEECSCCSGGGEEEEEEET
T ss_pred cc-----cceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhc---CcccccCChhHeeeeccCc
Confidence 32 23566666665444322 223444578999999999999999999997 6 899999999999997665
Q ss_pred -----eeeecCCCCchhhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-------H
Q 004195 625 -----HVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVV-------L 692 (769)
Q Consensus 625 -----~~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-------~ 692 (769)
.+|++|||.+....... ....++..|++||......++.++||||+||+++||++|+.||...... .
T Consensus 165 ~~~~~~~kl~dfg~s~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~ 243 (362)
T d1q8ya_ 165 PENLIQIKIADLGNACWYDEHY-TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDH 243 (362)
T ss_dssp TTTEEEEEECCCTTCEETTBCC-CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHH
T ss_pred ccccceeeEeeccccccccccc-ccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHH
Confidence 49999999986554332 3334556788999999899999999999999999999999998643211 1
Q ss_pred HHhhhhhccccc--ccc------ccccC---------c----------cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCH
Q 004195 693 VKDLLQVNIGTD--EAR------KSIVD---------P----------AVMNECSDESLKRMMELCLRCLSNEPKDRPSV 745 (769)
Q Consensus 693 ~~~~~~~~~~~~--~~~------~~~~d---------~----------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 745 (769)
....+.. .+.. ... ....+ . .......+....++.+|+.+|++.||.+|||+
T Consensus 244 ~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta 322 (362)
T d1q8ya_ 244 IAQIIEL-LGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADA 322 (362)
T ss_dssp HHHHHHH-HCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCH
T ss_pred HHHHHHH-hCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCH
Confidence 1111100 0000 000 00000 0 00123456677889999999999999999999
Q ss_pred HHHHHHhHhhhh
Q 004195 746 EDTLWNLQFATQ 757 (769)
Q Consensus 746 ~evl~~l~~~~~ 757 (769)
+|+++|+||...
T Consensus 323 ~e~L~Hp~f~~~ 334 (362)
T d1q8ya_ 323 GGLVNHPWLKDT 334 (362)
T ss_dssp HHHHTCGGGTTC
T ss_pred HHHhcCcccCCC
Confidence 999999999844
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.97 E-value=3.5e-32 Score=286.45 Aligned_cols=232 Identities=28% Similarity=0.374 Sum_probs=204.6
Q ss_pred CCCcEEEeecccccC--CCCccccCCCcCceeeccC-cccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCE
Q 004195 112 SSLKVLSLVSLGLWG--PLPGSIAHSSSLEILNLSS-NYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSV 188 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g--~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 188 (769)
.+++.|+|++|+++| .+|+.|++|++|++|||++ |+++|.+|.+|++|++|++|+|++|++.+..|..+..+.+|++
T Consensus 50 ~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~ 129 (313)
T d1ogqa_ 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred EEEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcc
Confidence 368899999999988 5899999999999999996 8999999999999999999999999999999999999999999
Q ss_pred EeccCCCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCC
Q 004195 189 LSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFG 267 (769)
Q Consensus 189 L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~ 267 (769)
++++.|.+.+.+|.+++++++|+.+++++|.++|.+|. +..+..+ +..+++++|++++.
T Consensus 130 l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l--------------------~~~l~~~~n~l~~~ 189 (313)
T d1ogqa_ 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKL--------------------FTSMTISRNRLTGK 189 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTT--------------------CCEEECCSSEEEEE
T ss_pred cccccccccccCchhhccCcccceeecccccccccccccccccccc--------------------cccccccccccccc
Confidence 99999999999999999999999999999999988875 5555443 23444455555554
Q ss_pred cCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccc
Q 004195 268 LNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQV 347 (769)
Q Consensus 268 i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~ 347 (769)
. |..+..+.. ..+++++|.+.+.+|..+..+++|+.+++++|.+++.++ .++.+++|+.|+|++|+++|.+|..+..
T Consensus 190 ~-~~~~~~l~~-~~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~ 266 (313)
T d1ogqa_ 190 I-PPTFANLNL-AFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQ 266 (313)
T ss_dssp C-CGGGGGCCC-SEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGG
T ss_pred c-ccccccccc-ccccccccccccccccccccccccccccccccccccccc-ccccccccccccCccCeecccCChHHhC
Confidence 4 666766654 479999999999999999999999999999999999765 5888999999999999999999999999
Q ss_pred cCCCceEECCCCCCChhhh
Q 004195 348 EAKTRLVLYSKNCLSNEEQ 366 (769)
Q Consensus 348 ~~~l~~l~l~~N~l~~~~~ 366 (769)
+++++.+++++|.++|..|
T Consensus 267 L~~L~~L~Ls~N~l~g~iP 285 (313)
T d1ogqa_ 267 LKFLHSLNVSFNNLCGEIP 285 (313)
T ss_dssp CTTCCEEECCSSEEEEECC
T ss_pred CCCCCEEECcCCcccccCC
Confidence 9999999999999998654
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.92 E-value=1.7e-24 Score=226.29 Aligned_cols=246 Identities=21% Similarity=0.246 Sum_probs=211.9
Q ss_pred CCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEec
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL 191 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 191 (769)
+++++|+|++|+++...+..|.++++|++|++++|.+....|..|.++++|++|+|++|+++ .+|..+ ...|..|++
T Consensus 31 ~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l~-~l~~~~--~~~l~~L~~ 107 (305)
T d1xkua_ 31 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKM--PKTLQELRV 107 (305)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSC--CTTCCEEEC
T ss_pred CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCCccC-cCccch--hhhhhhhhc
Confidence 57999999999998776678999999999999999999888889999999999999999998 566543 368899999
Q ss_pred cCCCCcccCCccccCCCCCCEEEccCcccccc--CC-CCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCc
Q 004195 192 KNNSLSGFLPVSLTGLQSLRVVSLSANHLSGE--IP-DLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGL 268 (769)
Q Consensus 192 ~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~--~p-~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i 268 (769)
..|.+.+..+..+.....+..++...|..... .+ .+..+++|+.+++++|.+.........+|+.|++++|...+..
T Consensus 108 ~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~l~~~~~~~L~~L~l~~n~~~~~~ 187 (305)
T d1xkua_ 108 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVD 187 (305)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCCTTCSEEECTTSCCCEEC
T ss_pred cccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCccccCcccCCccCEEECCCCcCCCCC
Confidence 99999988777888889999999998865432 22 3678899999999999987654456789999999999998765
Q ss_pred CchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccc---
Q 004195 269 NPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCL--- 345 (769)
Q Consensus 269 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~--- 345 (769)
+..+..++.++.|++++|.+.+..+..+.++++|++|+|++|+|+. +|..+..+++|+.|+|++|+|+......+
T Consensus 188 -~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~~-lp~~l~~l~~L~~L~Ls~N~i~~i~~~~f~~~ 265 (305)
T d1xkua_ 188 -AASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVK-VPGGLADHKYIQVVYLHNNNISAIGSNDFCPP 265 (305)
T ss_dssp -TGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSS-CCTTTTTCSSCCEEECCSSCCCCCCTTSSSCS
T ss_pred -hhHhhccccccccccccccccccccccccccccceeeecccccccc-cccccccccCCCEEECCCCccCccChhhccCc
Confidence 8889999999999999999999888899999999999999999986 57789999999999999999996543333
Q ss_pred ---cccCCCceEECCCCCCC
Q 004195 346 ---QVEAKTRLVLYSKNCLS 362 (769)
Q Consensus 346 ---~~~~~l~~l~l~~N~l~ 362 (769)
.....++.+++++|.+.
T Consensus 266 ~~~~~~~~L~~L~L~~N~~~ 285 (305)
T d1xkua_ 266 GYNTKKASYSGVSLFSNPVQ 285 (305)
T ss_dssp SCCTTSCCCSEEECCSSSSC
T ss_pred chhcccCCCCEEECCCCcCc
Confidence 34567889999999875
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=1.4e-23 Score=216.83 Aligned_cols=206 Identities=22% Similarity=0.243 Sum_probs=147.4
Q ss_pred CCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcc-cCcCCccCCccCcCCcCCCEEe
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILD-DNKFTGAVPSELSLLQVLSVLS 190 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~-~N~l~~~~p~~~~~l~~L~~L~ 190 (769)
+.+++|+|++|+|+...+..|.++++|++|++++|++.+..+..+.++..++.++.. .|.++...|.+|.++++|++|+
T Consensus 32 ~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~ 111 (284)
T d1ozna_ 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (284)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccccCCEEe
Confidence 457788888888876666778888888888888888887777777778888887654 5556666677788888888888
Q ss_pred ccCCCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcC
Q 004195 191 LKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLN 269 (769)
Q Consensus 191 L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~ 269 (769)
+++|.+....+..+..+++|+.+++++|+|++.++. +..+++|+.|++++|.+. .++
T Consensus 112 l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~----------------------~l~ 169 (284)
T d1ozna_ 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRIS----------------------SVP 169 (284)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC----------------------EEC
T ss_pred cCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCccc----------------------ccc
Confidence 888888766677777778888888888888765443 445555555555555443 233
Q ss_pred chhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCC
Q 004195 270 PDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTG 339 (769)
Q Consensus 270 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g 339 (769)
+..|..+++|++|++++|++++..|..|.++++|++|++++|++++..+..|..+++|+.|++++|.+.+
T Consensus 170 ~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C 239 (284)
T d1ozna_ 170 ERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (284)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred hhhhccccccchhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCCC
Confidence 5566666777777777777776666667777777777777777777666667677777777777776664
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.90 E-value=5e-23 Score=221.98 Aligned_cols=258 Identities=23% Similarity=0.272 Sum_probs=159.0
Q ss_pred CCeeEEEeCCCCCCCCCCCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCcc
Q 004195 76 DNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQ 155 (769)
Q Consensus 76 ~~v~~l~l~~~~~~~~~~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~ 155 (769)
.++++|++.+++...+ +.+..|++|++|+|++|++++. | .|+++++|++|++++|++++. + .
T Consensus 44 ~~l~~L~l~~~~I~~l--------------~gl~~L~nL~~L~Ls~N~l~~l-~-~l~~L~~L~~L~L~~n~i~~i-~-~ 105 (384)
T d2omza2 44 DQVTTLQADRLGIKSI--------------DGVEYLNNLTQINFSNNQLTDI-T-PLKNLTKLVDILMNNNQIADI-T-P 105 (384)
T ss_dssp TTCCEEECCSSCCCCC--------------TTGGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCCC-G-G
T ss_pred CCCCEEECCCCCCCCc--------------cccccCCCCCEEeCcCCcCCCC-c-cccCCcccccccccccccccc-c-c
Confidence 3577888776654321 2356677777777777777654 3 277777777777777777753 3 2
Q ss_pred ccCCCcCCEEEcccCcCCccC-----------------------------------------------------------
Q 004195 156 ISSLRNLQTLILDDNKFTGAV----------------------------------------------------------- 176 (769)
Q Consensus 156 ~~~l~~L~~L~L~~N~l~~~~----------------------------------------------------------- 176 (769)
++++++|+.|++++|.+++..
T Consensus 106 l~~l~~L~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (384)
T d2omza2 106 LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSN 185 (384)
T ss_dssp GTTCTTCCEEECCSSCCCCCGGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSS
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhcccccccccccccc
Confidence 677777777777776655311
Q ss_pred ----CccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcc-cc
Q 004195 177 ----PSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPR-LH 251 (769)
Q Consensus 177 ----p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~-~~ 251 (769)
+..+..+++++.|++++|.+++..| +..+++|+.|++++|+++. ++.+..+++|+.+++++|.+++..+- ..
T Consensus 186 ~~~~~~~~~~l~~~~~l~l~~n~i~~~~~--~~~~~~L~~L~l~~n~l~~-~~~l~~l~~L~~L~l~~n~l~~~~~~~~~ 262 (384)
T d2omza2 186 KVSDISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-IGTLASLTNLTDLDLANNQISNLAPLSGL 262 (384)
T ss_dssp CCCCCGGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGGGGGCTTCSEEECCSSCCCCCGGGTTC
T ss_pred ccccccccccccccceeeccCCccCCCCc--ccccCCCCEEECCCCCCCC-cchhhcccccchhccccCccCCCCccccc
Confidence 1223455667777777777776543 3456677777777777764 44566677777777777777654432 24
Q ss_pred cCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEE
Q 004195 252 KKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVD 331 (769)
Q Consensus 252 ~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~ 331 (769)
++|+.|++++|.+++. ..+..++.++.++++.|.+.+ +..+..+++++.|++++|++++..+ +..+++|+.|+
T Consensus 263 ~~L~~L~l~~~~l~~~---~~~~~~~~l~~l~~~~n~l~~--~~~~~~~~~l~~L~ls~n~l~~l~~--l~~l~~L~~L~ 335 (384)
T d2omza2 263 TKLTELKLGANQISNI---SPLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLF 335 (384)
T ss_dssp TTCSEEECCSSCCCCC---GGGTTCTTCSEEECCSSCCSC--CGGGGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEE
T ss_pred ccCCEeeccCcccCCC---Ccccccccccccccccccccc--ccccchhcccCeEECCCCCCCCCcc--cccCCCCCEEE
Confidence 5677777777766642 235555666666666666654 2345555666666666666665432 45556666666
Q ss_pred ccCCcCCCCCCccccccCCCceEECCCCCCCh
Q 004195 332 LSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 332 l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 363 (769)
+++|++++ +| .+..+++|+.+++++|.+++
T Consensus 336 L~~n~l~~-l~-~l~~l~~L~~L~l~~N~l~~ 365 (384)
T d2omza2 336 FANNKVSD-VS-SLANLTNINWLSAGHNQISD 365 (384)
T ss_dssp CCSSCCCC-CG-GGGGCTTCCEEECCSSCCCB
T ss_pred CCCCCCCC-Ch-hHcCCCCCCEEECCCCcCCC
Confidence 66666653 22 35555666666666666554
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=4.8e-23 Score=212.65 Aligned_cols=221 Identities=23% Similarity=0.241 Sum_probs=186.8
Q ss_pred EeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEecc-CCCC
Q 004195 118 SLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLK-NNSL 196 (769)
Q Consensus 118 ~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~-~N~l 196 (769)
+.++++++ .+|..+. +++++|+|++|+|+...+..|.++++|++|++++|++.+..+..+.++..+..++.. .|.+
T Consensus 17 ~c~~~~L~-~iP~~ip--~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~ 93 (284)
T d1ozna_ 17 SCPQQGLQ-AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQL 93 (284)
T ss_dssp ECCSSCCS-SCCTTCC--TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTC
T ss_pred EcCCCCCC-ccCCCCC--CCCCEEECcCCcCCCCCHHHhhcccccccccccccccccccccccccccccccccccccccc
Confidence 34444553 4565553 568999999999997666789999999999999999998888889999999998764 6677
Q ss_pred cccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcC
Q 004195 197 SGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRS 275 (769)
Q Consensus 197 ~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~ 275 (769)
+...|..|.++++|++|++++|.+....+. +....+|+.+++++|.++ .+++..|..
T Consensus 94 ~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~----------------------~i~~~~f~~ 151 (284)
T d1ozna_ 94 RSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ----------------------ALPDDTFRD 151 (284)
T ss_dssp CCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC----------------------CCCTTTTTT
T ss_pred ccccchhhcccccCCEEecCCcccccccccccchhcccchhhhcccccc----------------------ccChhHhcc
Confidence 777788899999999999999998765443 556667777766666654 343667888
Q ss_pred CCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEE
Q 004195 276 YNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVL 355 (769)
Q Consensus 276 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~ 355 (769)
+++|+.|++++|++++..+..|.++++|+.+++++|++++..|..|..+++|+.||+++|++++..|..+..+.+++.++
T Consensus 152 ~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~ 231 (284)
T d1ozna_ 152 LGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLR 231 (284)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEE
T ss_pred ccchhhcccccCcccccchhhhccccccchhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccCEEE
Confidence 89999999999999998888999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCh
Q 004195 356 YSKNCLSN 363 (769)
Q Consensus 356 l~~N~l~~ 363 (769)
+++|.+.+
T Consensus 232 l~~N~l~C 239 (284)
T d1ozna_ 232 LNDNPWVC 239 (284)
T ss_dssp CCSSCEEC
T ss_pred ecCCCCCC
Confidence 99997753
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=1e-22 Score=207.86 Aligned_cols=198 Identities=26% Similarity=0.265 Sum_probs=100.8
Q ss_pred CCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEec
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL 191 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 191 (769)
+.+...+.++++++. +|..+. ++|++|||++|+|++..+..|.++++|++|+|++|+|+ .+| .++.+++|++|+|
T Consensus 10 ~~~~~v~C~~~~L~~-iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~-~l~-~~~~l~~L~~L~L 84 (266)
T d1p9ag_ 10 ASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQ-VDGTLPVLGTLDL 84 (266)
T ss_dssp TTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-EEE-CCSCCTTCCEEEC
T ss_pred CCCeEEEccCCCCCe-eCcCcC--cCCCEEECcCCcCCCcCHHHhhcccccccccccccccc-ccc-ccccccccccccc
Confidence 344445555666543 454443 35566666666666544455666666666666666665 232 2445556666666
Q ss_pred cCCCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCc
Q 004195 192 KNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNP 270 (769)
Q Consensus 192 ~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p 270 (769)
++|++++ .+..+.++++|+.|++++|.+.+..+. +..+.+++.|++++|.+ + .+.+
T Consensus 85 s~N~l~~-~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l---------------------~-~l~~ 141 (266)
T d1p9ag_ 85 SHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNEL---------------------K-TLPP 141 (266)
T ss_dssp CSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCC---------------------C-CCCT
T ss_pred ccccccc-cccccccccccccccccccccceeecccccccccccccccccccc---------------------c-eecc
Confidence 6665553 344555555555555555555433221 22333333333333322 2 1223
Q ss_pred hhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCC
Q 004195 271 DELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLT 338 (769)
Q Consensus 271 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~ 338 (769)
..+..+++|+.|++++|++++..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|.+.
T Consensus 142 ~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~ 208 (266)
T d1p9ag_ 142 GLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (266)
T ss_dssp TTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred ccccccccchhcccccccccccCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCCC
Confidence 44444555555555555555544445555555555555555555 34444445555555555555443
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.89 E-value=1.7e-24 Score=209.50 Aligned_cols=168 Identities=10% Similarity=0.036 Sum_probs=119.4
Q ss_pred CCcCccccCCceeEEEEEeCCCcEEEEEEccccCCC-------------C-----hhHHHHHHHHHhhccCCceeeEeee
Q 004195 483 DSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKS-------------S-----PHMYTYHIELISKLRHSNLVSALGH 544 (769)
Q Consensus 483 ~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~-------------~-----~~~~~~Ei~~l~~l~H~nIv~l~~~ 544 (769)
...+.||+|+||+||+|+..+|+.||||+++..... . ...+.+|...+.+++|.+++..+++
T Consensus 3 ~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~ 82 (191)
T d1zara2 3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAW 82 (191)
T ss_dssp EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEE
T ss_pred hhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEe
Confidence 346889999999999999889999999987642110 0 1234568889999999999998865
Q ss_pred eeccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc
Q 004195 545 CLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF 624 (769)
Q Consensus 545 ~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~ 624 (769)
.. .+++|||++++.+.+ ++......++.|+++|++|||+. +|+||||||+|||++++
T Consensus 83 ~~-----------~~lvme~~~~~~~~~--------l~~~~~~~i~~ql~~~l~~lH~~---giiHrDiKP~NILv~~~- 139 (191)
T d1zara2 83 EG-----------NAVLMELIDAKELYR--------VRVENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVSEE- 139 (191)
T ss_dssp ET-----------TEEEEECCCCEEGGG--------CCCSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEETT-
T ss_pred cC-----------CEEEEEeeccccccc--------hhhHHHHHHHHHHHHHHHHHhhC---CEEEccCChhheeeeCC-
Confidence 42 279999999876543 23334567899999999999999 99999999999999865
Q ss_pred eeeecCCCCchhhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHH
Q 004195 625 HVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGII 674 (769)
Q Consensus 625 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvi 674 (769)
.++++|||.|.................... .+....|+.++||||..--
T Consensus 140 ~~~liDFG~a~~~~~~~~~~~l~rd~~~~~-~~f~r~y~~~~d~~s~~~~ 188 (191)
T d1zara2 140 GIWIIDFPQSVEVGEEGWREILERDVRNII-TYFSRTYRTEKDINSAIDR 188 (191)
T ss_dssp EEEECCCTTCEETTSTTHHHHHHHHHHHHH-HHHHHHHCCCCCHHHHHHH
T ss_pred CEEEEECCCcccCCCCCcHHHHHHHHHHHH-HHHcCCCCCcccHHHHHHH
Confidence 489999999865432211100000000001 1224678899999996543
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=3.1e-22 Score=204.35 Aligned_cols=203 Identities=22% Similarity=0.185 Sum_probs=173.3
Q ss_pred ccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCC
Q 004195 132 IAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLR 211 (769)
Q Consensus 132 ~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 211 (769)
..+.+.+...|.+++.|+ .+|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|+|+. +| .++.+++|+
T Consensus 6 ~~~~~~~~~v~C~~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~-l~-~~~~l~~L~ 80 (266)
T d1p9ag_ 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQ-VDGTLPVLG 80 (266)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EE-CCSCCTTCC
T ss_pred EcccCCCeEEEccCCCCC-eeCcCcC--cCCCEEECcCCcCCCcCHHHhhccccccccccccccccc-cc-ccccccccc
Confidence 345666777899999998 5787765 578999999999987777889999999999999999984 33 457889999
Q ss_pred EEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccc
Q 004195 212 VVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVG 291 (769)
Q Consensus 212 ~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~ 291 (769)
+|+|++|++++..+.+..+++|+.|++++|.+.. +.+..+..+.++++|++++|.+..
T Consensus 81 ~L~Ls~N~l~~~~~~~~~l~~L~~L~l~~~~~~~----------------------~~~~~~~~l~~l~~L~l~~n~l~~ 138 (266)
T d1p9ag_ 81 TLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTS----------------------LPLGALRGLGELQELYLKGNELKT 138 (266)
T ss_dssp EEECCSSCCSSCCCCTTTCTTCCEEECCSSCCCC----------------------CCSSTTTTCTTCCEEECTTSCCCC
T ss_pred ccccccccccccccccccccccccccccccccce----------------------eeccccccccccccccccccccce
Confidence 9999999998877778888888888887776642 335667788899999999999998
Q ss_pred cCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCC
Q 004195 292 PFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLS 362 (769)
Q Consensus 292 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~ 362 (769)
..+..+..+++|+.|++++|++++..+..|..+++|+.|+|++|+|+ .+|..+...++++.+++++|.+.
T Consensus 139 l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~ 208 (266)
T d1p9ag_ 139 LPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (266)
T ss_dssp CCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred eccccccccccchhcccccccccccCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCCC
Confidence 87788889999999999999999999999999999999999999999 78888888899999999999664
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.88 E-value=2.3e-21 Score=202.12 Aligned_cols=269 Identities=20% Similarity=0.228 Sum_probs=214.0
Q ss_pred ceEecCCCeeEEEeCCCCCCCCCCCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccC
Q 004195 70 TLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLS 149 (769)
Q Consensus 70 ~v~C~~~~v~~l~l~~~~~~~~~~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 149 (769)
+|.|.+.+++++.- +..-.....++++|.++...+.+|.++++|+.|++++|.+....|..|.++++|++|++++|+++
T Consensus 14 ~~~C~~~~L~~lP~-~l~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l~ 92 (305)
T d1xkua_ 14 VVQCSDLGLEKVPK-DLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK 92 (305)
T ss_dssp EEECTTSCCCSCCC-SCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS
T ss_pred EEEecCCCCCccCC-CCCCCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCCccC
Confidence 58887655554421 10111112345666666666678999999999999999999888999999999999999999999
Q ss_pred CcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCc--ccCCccccCCCCCCEEEccCccccccCCCC
Q 004195 150 GSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLS--GFLPVSLTGLQSLRVVSLSANHLSGEIPDL 227 (769)
Q Consensus 150 g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l 227 (769)
.+|..+ ...|..|++++|.+.+..+..+.....+..++...|... ...+..+..+++|+.+++++|+++.....
T Consensus 93 -~l~~~~--~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~l~~~- 168 (305)
T d1xkua_ 93 -ELPEKM--PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQG- 168 (305)
T ss_dssp -BCCSSC--CTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSS-
T ss_pred -cCccch--hhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCccccCcc-
Confidence 566554 357899999999999877777888899999999988653 44567888999999999999999754332
Q ss_pred CCCccCcEEeccCCcCCCCCccc---ccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCC
Q 004195 228 RNLKNLRVFDVQDNYFGPRFPRL---HKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSIT 304 (769)
Q Consensus 228 ~~l~~L~~l~l~~N~l~~~~p~~---~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 304 (769)
.+++|+.|++++|...+..+.. ...++.|++++|.+++ +.+..+..+++|++|+|++|.|+. +|+.|.++++|+
T Consensus 169 -~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~-~~~~~~~~l~~L~~L~L~~N~L~~-lp~~l~~l~~L~ 245 (305)
T d1xkua_ 169 -LPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISA-VDNGSLANTPHLRELHLNNNKLVK-VPGGLADHKYIQ 245 (305)
T ss_dssp -CCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCE-ECTTTGGGSTTCCEEECCSSCCSS-CCTTTTTCSSCC
T ss_pred -cCCccCEEECCCCcCCCCChhHhhccccccccccccccccc-cccccccccccceeeecccccccc-cccccccccCCC
Confidence 3679999999999998777654 3578899999999985 448899999999999999999985 688999999999
Q ss_pred EEEccCCcCCcccccc------CCCCCCCcEEEccCCcCC--CCCCcccc
Q 004195 305 YLDIHGNKLTGLLLQN------MSCNPQLAFVDLSSNLLT--GYLPSCLQ 346 (769)
Q Consensus 305 ~L~l~~N~l~~~~~~~------~~~l~~L~~l~l~~N~l~--g~~p~~~~ 346 (769)
+|+|++|+|+...... +..+++|+.|+|++|.+. ...|.+|.
T Consensus 246 ~L~Ls~N~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~~~~~~~~~~f~ 295 (305)
T d1xkua_ 246 VVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFR 295 (305)
T ss_dssp EEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGT
T ss_pred EEECCCCccCccChhhccCcchhcccCCCCEEECCCCcCccCcCCHhHhc
Confidence 9999999999764433 346788999999999985 23444444
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.86 E-value=4.9e-21 Score=206.16 Aligned_cols=239 Identities=22% Similarity=0.319 Sum_probs=199.7
Q ss_pred CCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCE
Q 004195 109 GSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSV 188 (769)
Q Consensus 109 ~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 188 (769)
..+.+|+.|++++++++. + ..+..|++|++|||++|+|++ +| .|++|++|++|+|++|++++.. .++++++|+.
T Consensus 41 ~~l~~l~~L~l~~~~I~~-l-~gl~~L~nL~~L~Ls~N~l~~-l~-~l~~L~~L~~L~L~~n~i~~i~--~l~~l~~L~~ 114 (384)
T d2omza2 41 TDLDQVTTLQADRLGIKS-I-DGVEYLNNLTQINFSNNQLTD-IT-PLKNLTKLVDILMNNNQIADIT--PLANLTNLTG 114 (384)
T ss_dssp HHHTTCCEEECCSSCCCC-C-TTGGGCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCCCCG--GGTTCTTCCE
T ss_pred HHhCCCCEEECCCCCCCC-c-cccccCCCCCEEeCcCCcCCC-Cc-cccCCccccccccccccccccc--cccccccccc
Confidence 457789999999999975 3 358899999999999999996 44 3999999999999999998643 3899999999
Q ss_pred EeccCCCCcccC---------------------------------------------------------------Ccccc
Q 004195 189 LSLKNNSLSGFL---------------------------------------------------------------PVSLT 205 (769)
Q Consensus 189 L~L~~N~l~~~~---------------------------------------------------------------p~~l~ 205 (769)
|++++|.+++.. ...+.
T Consensus 115 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (384)
T d2omza2 115 LTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLA 194 (384)
T ss_dssp EECCSSCCCCCGGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCGGGG
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccccccccccc
Confidence 999988876421 12345
Q ss_pred CCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCc-ccccCCcEEEeCCccccCCcCchhhcCCCcCcEEec
Q 004195 206 GLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFP-RLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDI 284 (769)
Q Consensus 206 ~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p-~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~L 284 (769)
.+++++.+++++|.+++..| ....++|+.|++++|.++.... ..+++|+.|++++|.+++. ..+..+++|++|++
T Consensus 195 ~l~~~~~l~l~~n~i~~~~~-~~~~~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~---~~~~~~~~L~~L~l 270 (384)
T d2omza2 195 KLTNLESLIATNNQISDITP-LGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNL---APLSGLTKLTELKL 270 (384)
T ss_dssp GCTTCSEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCC---GGGTTCTTCSEEEC
T ss_pred cccccceeeccCCccCCCCc-ccccCCCCEEECCCCCCCCcchhhcccccchhccccCccCCC---CcccccccCCEeec
Confidence 67889999999999997654 5677899999999999976321 2367899999999999863 34888999999999
Q ss_pred cCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCCh
Q 004195 285 SLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 285 s~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 363 (769)
++|.+.+. +.+..++.++.+++++|++++. ..+..+++++.|++++|++++..| +..+++++.+++++|.++.
T Consensus 271 ~~~~l~~~--~~~~~~~~l~~l~~~~n~l~~~--~~~~~~~~l~~L~ls~n~l~~l~~--l~~l~~L~~L~L~~n~l~~ 343 (384)
T d2omza2 271 GANQISNI--SPLAGLTALTNLELNENQLEDI--SPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSD 343 (384)
T ss_dssp CSSCCCCC--GGGTTCTTCSEEECCSSCCSCC--GGGGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred cCcccCCC--Cccccccccccccccccccccc--cccchhcccCeEECCCCCCCCCcc--cccCCCCCEEECCCCCCCC
Confidence 99999874 3478899999999999999873 457788999999999999998643 7788999999999999875
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.76 E-value=9.2e-19 Score=173.72 Aligned_cols=207 Identities=22% Similarity=0.302 Sum_probs=126.9
Q ss_pred CCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEe
Q 004195 111 LSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLS 190 (769)
Q Consensus 111 l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 190 (769)
|.++..++++.+++++.+ .+..|.+|++|++++|.|+. ++ .+..|++|++|+|++|++++..| +..+++|++|+
T Consensus 18 l~~~~~~~l~~~~~~d~~--~~~~l~~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~ 91 (227)
T d1h6ua2 18 LANAIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELE 91 (227)
T ss_dssp HHHHHHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEE
T ss_pred HHHHHHHHhCCCCcCCcC--CHHHcCCcCEEECCCCCCCc-ch-hHhcCCCCcEeecCCceeecccc--ccccccccccc
Confidence 334444566666666543 45667778888888888874 43 57788888888888888775433 77788888888
Q ss_pred ccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCc-ccccCCcEEEeCCccccCCcC
Q 004195 191 LKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFP-RLHKKMVTLVLRNNRFQFGLN 269 (769)
Q Consensus 191 L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p-~~~~~L~~L~l~~N~~~~~i~ 269 (769)
+++|.++. + ..+.++++|+.++++.|...+. +.+.....+..+.++.+.+....+ ....+|+.|++++|.+..
T Consensus 92 ~~~n~~~~-i-~~l~~l~~L~~l~l~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~--- 165 (227)
T d1h6ua2 92 LSGNPLKN-V-SAIAGLQSIKTLDLTSTQITDV-TPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSD--- 165 (227)
T ss_dssp CCSCCCSC-C-GGGTTCTTCCEEECTTSCCCCC-GGGTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCC---
T ss_pred cccccccc-c-cccccccccccccccccccccc-chhccccchhhhhchhhhhchhhhhcccccccccccccccccc---
Confidence 88887763 3 3567778888888877776643 335556666667776666654332 123455566666555542
Q ss_pred chhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEcc
Q 004195 270 PDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLS 333 (769)
Q Consensus 270 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~ 333 (769)
...+..+++|++|+|++|++++ + +.+.++++|++|+|++|++++..| ++.+++|+.|+++
T Consensus 166 ~~~l~~l~~L~~L~Ls~n~l~~-l-~~l~~l~~L~~L~Ls~N~lt~i~~--l~~l~~L~~L~ls 225 (227)
T d1h6ua2 166 LTPLANLSKLTTLKADDNKISD-I-SPLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLT 225 (227)
T ss_dssp CGGGTTCTTCCEEECCSSCCCC-C-GGGGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEE
T ss_pred chhhcccccceecccCCCccCC-C-hhhcCCCCCCEEECcCCcCCCCcc--cccCCCCCEEEee
Confidence 2235555556666666655554 1 225555555666666555554322 4555555555554
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.76 E-value=3.5e-18 Score=171.21 Aligned_cols=194 Identities=15% Similarity=0.076 Sum_probs=95.3
Q ss_pred cCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccC-CccCcCCcCCCEEecc-CCCCcccCCccccCCCCCCEEE
Q 004195 137 SLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAV-PSELSLLQVLSVLSLK-NNSLSGFLPVSLTGLQSLRVVS 214 (769)
Q Consensus 137 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~-~N~l~~~~p~~l~~l~~L~~L~ 214 (769)
++++|||++|+|+...+..|.++++|++|+|++|.+...+ +..|.+++++++|++. .|++....+..|.++++|+.|+
T Consensus 30 ~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l~ 109 (242)
T d1xwdc1 30 NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLL 109 (242)
T ss_dssp CCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEEE
T ss_pred CCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccccccccccccccccccccccccc
Confidence 4555555555555333334555555555555555554433 3345555555555543 3455555555556666666666
Q ss_pred ccCccccccCC--CCCCCccCcEEeccCCcCCCCCcc----cccCCcEEEeCCccccCCcCchhhcCCCcCcE-EeccCc
Q 004195 215 LSANHLSGEIP--DLRNLKNLRVFDVQDNYFGPRFPR----LHKKMVTLVLRNNRFQFGLNPDELRSYNQLQK-LDISLN 287 (769)
Q Consensus 215 ls~N~l~~~~p--~l~~l~~L~~l~l~~N~l~~~~p~----~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~-L~Ls~N 287 (769)
+++|.+....+ .+..++.|..+...++.+....+. ....+..|++++|+++ .+ +......++++. +++++|
T Consensus 110 l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~-~i-~~~~~~~~~l~~~~~l~~n 187 (242)
T d1xwdc1 110 ISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EI-HNCAFNGTQLDELNLSDNN 187 (242)
T ss_dssp EESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EE-CTTTTTTCCEEEEECTTCT
T ss_pred cchhhhcccccccccccccccccccccccccccccccccccccccceeeeccccccc-cc-ccccccchhhhcccccccc
Confidence 66665543221 122333333334444433221111 1123444555555554 23 222223333333 345555
Q ss_pred cccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEc
Q 004195 288 RFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDL 332 (769)
Q Consensus 288 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l 332 (769)
+++...+..|.++++|++|+|++|+++...+..|.++++|+.+++
T Consensus 188 ~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~~ 232 (242)
T d1xwdc1 188 NLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST 232 (242)
T ss_dssp TCCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTCCEEESSSE
T ss_pred ccccccHHHhcCCCCCCEEECCCCcCCccCHHHHcCCcccccCcC
Confidence 565543444666666666666666666554555555555555544
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.76 E-value=1.7e-19 Score=174.00 Aligned_cols=113 Identities=26% Similarity=0.257 Sum_probs=95.0
Q ss_pred CCCcEEEeecccccCCC-CccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEe
Q 004195 112 SSLKVLSLVSLGLWGPL-PGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLS 190 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~-p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 190 (769)
+++++|+|++|.|++.+ +..|.++++|+.|+|++|.+.+..+..|..+++|++|+|++|+|++..|..|.++++|++|+
T Consensus 29 ~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~ 108 (192)
T d1w8aa_ 29 LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLN 108 (192)
T ss_dssp TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEE
T ss_pred CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccccccccCHHHHhCCCcccccc
Confidence 56788899999887644 56778888899999988888888888888888888889988888877788888888888888
Q ss_pred ccCCCCcccCCccccCCCCCCEEEccCccccccC
Q 004195 191 LKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEI 224 (769)
Q Consensus 191 L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~ 224 (769)
|++|+|++..|..|.++++|++|+|++|.+....
T Consensus 109 L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~ 142 (192)
T d1w8aa_ 109 LYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp CCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred cCCccccccCHHHhcCCccccccccccccccccc
Confidence 8888888888888888888888888888876543
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.76 E-value=2.7e-18 Score=170.35 Aligned_cols=208 Identities=20% Similarity=0.276 Sum_probs=158.8
Q ss_pred CCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEE
Q 004195 134 HSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVV 213 (769)
Q Consensus 134 ~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 213 (769)
.|.++..++++.+.+++.+ .+..|.+|+.|++++|.++. ++ .+..+++|++|++++|++++..| +.++++|+++
T Consensus 17 ~l~~~~~~~l~~~~~~d~~--~~~~l~~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l 90 (227)
T d1h6ua2 17 ALANAIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITEL 90 (227)
T ss_dssp HHHHHHHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEE
T ss_pred HHHHHHHHHhCCCCcCCcC--CHHHcCCcCEEECCCCCCCc-ch-hHhcCCCCcEeecCCceeecccc--cccccccccc
Confidence 3445556778888887643 45678888899999988874 43 58888999999999998886543 7888889999
Q ss_pred EccCccccccCCCCCCCccCcEEeccCCcCCCCCcc-cccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCcccccc
Q 004195 214 SLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPR-LHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGP 292 (769)
Q Consensus 214 ~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~-~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~ 292 (769)
++++|.++ .++.+..+++|+.++++++...+..+- ....+..+.++++.+.. ...+..+++|+.|++++|.+...
T Consensus 91 ~~~~n~~~-~i~~l~~l~~L~~l~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~L~~L~l~~n~~~~~ 166 (227)
T d1h6ua2 91 ELSGNPLK-NVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITN---ISPLAGLTNLQYLSIGNAQVSDL 166 (227)
T ss_dssp ECCSCCCS-CCGGGTTCTTCCEEECTTSCCCCCGGGTTCTTCCEEECCSSCCCC---CGGGGGCTTCCEEECCSSCCCCC
T ss_pred cccccccc-ccccccccccccccccccccccccchhccccchhhhhchhhhhch---hhhhccccccccccccccccccc
Confidence 99888886 466788888889999888887665442 34677788888887764 34567788889999988888653
Q ss_pred CCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECC
Q 004195 293 FIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYS 357 (769)
Q Consensus 293 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~ 357 (769)
..+.++++|+.|+|++|++++.. .++.+++|++|+|++|+++...| +..+++|+.++++
T Consensus 167 --~~l~~l~~L~~L~Ls~n~l~~l~--~l~~l~~L~~L~Ls~N~lt~i~~--l~~l~~L~~L~ls 225 (227)
T d1h6ua2 167 --TPLANLSKLTTLKADDNKISDIS--PLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLT 225 (227)
T ss_dssp --GGGTTCTTCCEEECCSSCCCCCG--GGGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEE
T ss_pred --hhhcccccceecccCCCccCCCh--hhcCCCCCCEEECcCCcCCCCcc--cccCCCCCEEEee
Confidence 34788888999999999888742 37788889999999998885433 6677888888775
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.74 E-value=3e-18 Score=165.17 Aligned_cols=129 Identities=23% Similarity=0.311 Sum_probs=113.0
Q ss_pred cEEEeecccccCCCCccccCCCcCceeeccCcccCCcC-CccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccC
Q 004195 115 KVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSI-PVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKN 193 (769)
Q Consensus 115 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 193 (769)
+.++.++++++ .+|..+. +++++|+|++|+|++.+ +..|.++++|+.|+|++|++.+..+..|..+++|++|+|++
T Consensus 11 ~~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~ 87 (192)
T d1w8aa_ 11 TTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEEeCCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecc
Confidence 35677777775 5676664 68999999999998755 66789999999999999999999999999999999999999
Q ss_pred CCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCC
Q 004195 194 NSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPR 246 (769)
Q Consensus 194 N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~ 246 (769)
|++++..|..|.++++|++|+|++|+|++..++ |..+++|+++++++|.+...
T Consensus 88 N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~ 141 (192)
T d1w8aa_ 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred ccccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccccc
Confidence 999998899999999999999999999988776 78899999999988887643
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.74 E-value=7e-18 Score=164.97 Aligned_cols=180 Identities=23% Similarity=0.296 Sum_probs=110.2
Q ss_pred EeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCc
Q 004195 118 SLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLS 197 (769)
Q Consensus 118 ~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 197 (769)
++..+.+++.++. ..+.+|++|++++|.++. ++ .+..+++|++|+|++|+|++ ++ .++++++|++|++++|+++
T Consensus 30 ~l~~~~~~~~~~~--~~L~~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~L~~n~i~~-l~-~~~~l~~L~~L~l~~n~i~ 103 (210)
T d1h6ta2 30 NLKKKSVTDAVTQ--NELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTD-IK-PLANLKNLGWLFLDENKVK 103 (210)
T ss_dssp HTTCSCTTSEECH--HHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCC
T ss_pred HhCcCccCCccCH--HHhcCccEEECcCCCCCC-ch-hHhhCCCCCEEeCCCccccC-cc-ccccCcccccccccccccc
Confidence 4444555444332 245566666777776663 22 35666677777777776664 33 2566666777777766666
Q ss_pred ccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCC
Q 004195 198 GFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYN 277 (769)
Q Consensus 198 ~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~ 277 (769)
+ +| .+.++++|+.|++++|.+.. ++.+..++.|+.++++.|.++ . +..+..++
T Consensus 104 ~-l~-~l~~l~~L~~L~l~~~~~~~-~~~l~~l~~l~~l~~~~n~l~---------------------~---~~~~~~l~ 156 (210)
T d1h6ta2 104 D-LS-SLKDLKKLKSLSLEHNGISD-INGLVHLPQLESLYLGNNKIT---------------------D---ITVLSRLT 156 (210)
T ss_dssp C-GG-GGTTCTTCCEEECTTSCCCC-CGGGGGCTTCCEEECCSSCCC---------------------C---CGGGGGCT
T ss_pred c-cc-cccccccccccccccccccc-ccccccccccccccccccccc---------------------c---cccccccc
Confidence 4 33 46666667777776666542 344555555555555555443 1 33455677
Q ss_pred cCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccC
Q 004195 278 QLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSS 334 (769)
Q Consensus 278 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~ 334 (769)
+|+++++++|++++. +.+.++++|+.|+|++|+++.. + .+..+++|++|+|++
T Consensus 157 ~L~~l~l~~n~l~~i--~~l~~l~~L~~L~Ls~N~i~~l-~-~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 157 KLDTLSLEDNQISDI--VPLAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFS 209 (210)
T ss_dssp TCSEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEE
T ss_pred ccccccccccccccc--ccccCCCCCCEEECCCCCCCCC-h-hhcCCCCCCEEEccC
Confidence 777777777777652 2367777888888888877653 3 477777888887764
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.71 E-value=6.1e-17 Score=162.04 Aligned_cols=213 Identities=15% Similarity=0.113 Sum_probs=164.9
Q ss_pred ceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccC-CccccCCCCCCEEEccC
Q 004195 139 EILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFL-PVSLTGLQSLRVVSLSA 217 (769)
Q Consensus 139 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~l~~l~~L~~L~ls~ 217 (769)
+.++.+++.++ .+|..+. +++++|+|++|+|+...+..|.++++|++|+|++|.+...+ +..|.++++++++.+..
T Consensus 11 ~~i~c~~~~l~-~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~ 87 (242)
T d1xwdc1 11 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 87 (242)
T ss_dssp SEEEEESCSCS-SCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEEC
T ss_pred CEEEEeCCCCC-CcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccc
Confidence 57788888888 6776664 58999999999999666678999999999999999987655 46789999999999864
Q ss_pred -ccccccCCC-CCCCccCcEEeccCCcCCCCCcc-c---ccCCcEEEeCCccccCCcCchhhcCCC-cCcEEeccCcccc
Q 004195 218 -NHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPR-L---HKKMVTLVLRNNRFQFGLNPDELRSYN-QLQKLDISLNRFV 290 (769)
Q Consensus 218 -N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p~-~---~~~L~~L~l~~N~~~~~i~p~~~~~l~-~L~~L~Ls~N~l~ 290 (769)
|++....+. +..+++|+.+++++|.+....+. . ...+..+...++.+. .+.+..+..++ .++.|++++|+++
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~-~i~~~~~~~~~~~l~~L~l~~n~l~ 166 (242)
T d1xwdc1 88 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIH-TIERNSFVGLSFESVILWLNKNGIQ 166 (242)
T ss_dssp CTTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCC-EECTTSSTTSBSSCEEEECCSSCCC
T ss_pred cccccccccccccccccccccccchhhhcccccccccccccccccccccccccc-cccccccccccccceeeeccccccc
Confidence 677776665 78899999999999998754332 1 345556666777766 34456666654 7889999999998
Q ss_pred ccCCccCCCCCCCCEE-EccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEEC
Q 004195 291 GPFIPSLLSLPSITYL-DIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLY 356 (769)
Q Consensus 291 ~~~~~~~~~l~~L~~L-~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l 356 (769)
... ......+++..+ ++++|+++...+..|..+++|+.|+|++|+++...+..+..+..|+.+++
T Consensus 167 ~i~-~~~~~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~~ 232 (242)
T d1xwdc1 167 EIH-NCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST 232 (242)
T ss_dssp EEC-TTTTTTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTCCEEESSSE
T ss_pred ccc-cccccchhhhccccccccccccccHHHhcCCCCCCEEECCCCcCCccCHHHHcCCcccccCcC
Confidence 644 444455665555 57888999877778999999999999999999666666777666665544
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.70 E-value=1.7e-17 Score=162.27 Aligned_cols=186 Identities=19% Similarity=0.293 Sum_probs=148.9
Q ss_pred CcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEc
Q 004195 136 SSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSL 215 (769)
Q Consensus 136 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l 215 (769)
.++...+++.+.+++.++. ..|.+|+.|++++|.++.. + .+..+++|++|+|++|.+++.. .++++++|++|++
T Consensus 24 ~~~i~~~l~~~~~~~~~~~--~~L~~L~~L~l~~~~i~~l-~-~l~~l~~L~~L~L~~n~i~~l~--~~~~l~~L~~L~l 97 (210)
T d1h6ta2 24 AETIKDNLKKKSVTDAVTQ--NELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIK--PLANLKNLGWLFL 97 (210)
T ss_dssp HHHHHHHTTCSCTTSEECH--HHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEEC
T ss_pred HHHHHHHhCcCccCCccCH--HHhcCccEEECcCCCCCCc-h-hHhhCCCCCEEeCCCccccCcc--ccccCcccccccc
Confidence 3444567778888766653 3577899999999998843 3 3788999999999999998643 3678999999999
Q ss_pred cCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCc
Q 004195 216 SANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIP 295 (769)
Q Consensus 216 s~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 295 (769)
++|++++ +|.+..+++|+.+++++|.+. . ...+..++.|+.+++++|.++. +.
T Consensus 98 ~~n~i~~-l~~l~~l~~L~~L~l~~~~~~----------------------~--~~~l~~l~~l~~l~~~~n~l~~--~~ 150 (210)
T d1h6ta2 98 DENKVKD-LSSLKDLKKLKSLSLEHNGIS----------------------D--INGLVHLPQLESLYLGNNKITD--IT 150 (210)
T ss_dssp CSSCCCC-GGGGTTCTTCCEEECTTSCCC----------------------C--CGGGGGCTTCCEEECCSSCCCC--CG
T ss_pred ccccccc-ccccccccccccccccccccc----------------------c--cccccccccccccccccccccc--cc
Confidence 9999885 556777888888877777553 1 3457788999999999999976 45
Q ss_pred cCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCC
Q 004195 296 SLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSK 358 (769)
Q Consensus 296 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~ 358 (769)
.+..+++|+.+++++|++++.. .+..+++|+.|+|++|+++. +| .+..+++|+.|++++
T Consensus 151 ~~~~l~~L~~l~l~~n~l~~i~--~l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 151 VLSRLTKLDTLSLEDNQISDIV--PLAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFS 209 (210)
T ss_dssp GGGGCTTCSEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEE
T ss_pred cccccccccccccccccccccc--cccCCCCCCEEECCCCCCCC-Ch-hhcCCCCCCEEEccC
Confidence 6778999999999999998753 38899999999999999984 55 478889999998753
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.70 E-value=5.1e-17 Score=157.30 Aligned_cols=175 Identities=23% Similarity=0.329 Sum_probs=86.8
Q ss_pred EeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCc
Q 004195 118 SLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLS 197 (769)
Q Consensus 118 ~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 197 (769)
.++.+.+++.++ ...+.+|++|++++|.++. ++ .+..+++|++|+|++|++++..| ++++++|++|++++|.+.
T Consensus 24 ~l~~~~~~~~~~--~~~l~~l~~L~l~~~~i~~-l~-~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~ 97 (199)
T d2omxa2 24 VLGKTNVTDTVS--QTDLDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIA 97 (199)
T ss_dssp HTTCSSTTSEEC--HHHHTTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred HhCCCCCCCccC--HHHhcCCCEEECCCCCCCC-cc-ccccCCCcCcCccccccccCccc--ccCCcccccccccccccc
Confidence 344444444322 2344555566666665552 22 35555666666666666553222 555566666666665554
Q ss_pred ccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCC
Q 004195 198 GFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYN 277 (769)
Q Consensus 198 ~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~ 277 (769)
. ++ .+.++++|+.|++++|.+.. ++.+..+++|+.+++++|.+. . .+.+..++
T Consensus 98 ~-~~-~l~~l~~L~~L~l~~~~~~~-~~~~~~l~~L~~L~l~~n~l~----------------------~--~~~l~~~~ 150 (199)
T d2omxa2 98 D-IT-PLANLTNLTGLTLFNNQITD-IDPLKNLTNLNRLELSSNTIS----------------------D--ISALSGLT 150 (199)
T ss_dssp C-CG-GGTTCTTCSEEECCSSCCCC-CGGGTTCTTCSEEECCSSCCC----------------------C--CGGGTTCT
T ss_pred c-cc-cccccccccccccccccccc-ccccchhhhhHHhhhhhhhhc----------------------c--cccccccc
Confidence 3 22 25555555565555555543 222344444444444444332 1 12344555
Q ss_pred cCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcE
Q 004195 278 QLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAF 329 (769)
Q Consensus 278 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 329 (769)
+|++|++++|++++. +.+.++++|+.|++++|+++.. +.++.+++|+.
T Consensus 151 ~L~~L~l~~n~l~~l--~~l~~l~~L~~L~ls~N~i~~i--~~l~~L~~L~~ 198 (199)
T d2omxa2 151 SLQQLNFSSNQVTDL--KPLANLTTLERLDISSNKVSDI--SVLAKLTNLES 198 (199)
T ss_dssp TCSEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSE
T ss_pred cccccccccccccCC--ccccCCCCCCEEECCCCCCCCC--ccccCCCCCCc
Confidence 556666666555542 2355556666666666655542 23444555544
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=99.70 E-value=1.3e-15 Score=160.69 Aligned_cols=248 Identities=24% Similarity=0.260 Sum_probs=156.6
Q ss_pred CCeeEEEeCCCCCCCCCCCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCcc
Q 004195 76 DNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQ 155 (769)
Q Consensus 76 ~~v~~l~l~~~~~~~~~~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~ 155 (769)
.+++.|+++++.+.. +|+. +++|++|+|++|+|+ .+|..+ .+|+.|++++|+++ .++..
T Consensus 38 ~~l~~LdLs~~~L~~-------------lp~~---~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~-~l~~l 96 (353)
T d1jl5a_ 38 RQAHELELNNLGLSS-------------LPEL---PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLK-ALSDL 96 (353)
T ss_dssp HTCSEEECTTSCCSC-------------CCSC---CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCS-CCCSC
T ss_pred cCCCEEEeCCCCCCC-------------CCCC---CCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccc-hhhhh
Confidence 467788887765542 2221 356788888888876 566543 46777777888776 34421
Q ss_pred ccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccC------------------CccccCCCCCCEEEccC
Q 004195 156 ISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFL------------------PVSLTGLQSLRVVSLSA 217 (769)
Q Consensus 156 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~------------------p~~l~~l~~L~~L~ls~ 217 (769)
.++|++|+|++|.++ .+|. ++.+++|++|++++|.++... +..+..++.++.|+++.
T Consensus 97 ---p~~L~~L~L~~n~l~-~lp~-~~~l~~L~~L~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~l~~l~~l~~L~l~~ 171 (353)
T d1jl5a_ 97 ---PPLLEYLGVSNNQLE-KLPE-LQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADN 171 (353)
T ss_dssp ---CTTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSSCCCCTTCTTCCEEECCS
T ss_pred ---ccccccccccccccc-cccc-hhhhccceeeccccccccccccccccccchhhccccccccccccccccceeccccc
Confidence 135778888888877 4553 577788888888777765322 22345567777888877
Q ss_pred cccccc-------------------CCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCCc
Q 004195 218 NHLSGE-------------------IPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQ 278 (769)
Q Consensus 218 N~l~~~-------------------~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~ 278 (769)
|.+... ++.+..++.|+.+++++|.... ++.....+..+.+..|.+... +.. ...
T Consensus 172 n~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~L~~l~l~~n~~~~-~~~~~~~l~~~~~~~~~~~~~--~~~---~~~ 245 (353)
T d1jl5a_ 172 NSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYADNNLLKT-LPDLPPSLEALNVRDNYLTDL--PEL---PQS 245 (353)
T ss_dssp SCCSSCCCCCTTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSS-CCSCCTTCCEEECCSSCCSCC--CCC---CTT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccc--ccc---ccc
Confidence 765432 2335567788888888877653 455556667777777766532 111 122
Q ss_pred CcEEeccCccccc----------------cCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCC
Q 004195 279 LQKLDISLNRFVG----------------PFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLP 342 (769)
Q Consensus 279 L~~L~Ls~N~l~~----------------~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p 342 (769)
+...++..|.+.+ .+......+++|++|+|++|+++. +|. .+++|+.|+|++|+|+ .+|
T Consensus 246 l~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~-lp~---~~~~L~~L~L~~N~L~-~l~ 320 (353)
T d1jl5a_ 246 LTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPA---LPPRLERLIASFNHLA-EVP 320 (353)
T ss_dssp CCEEECCSSCCSEESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCS-CCC
T ss_pred ccccccccccccccccccchhcccccccCccccccccCCCCCEEECCCCccCc-ccc---ccCCCCEEECCCCcCC-ccc
Confidence 3333333332221 011112335789999999999885 454 3578999999999998 566
Q ss_pred ccccccCCCceEECCCCCCCh
Q 004195 343 SCLQVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 343 ~~~~~~~~l~~l~l~~N~l~~ 363 (769)
.. ..+++.+++++|.++.
T Consensus 321 ~~---~~~L~~L~L~~N~L~~ 338 (353)
T d1jl5a_ 321 EL---PQNLKQLHVEYNPLRE 338 (353)
T ss_dssp CC---CTTCCEEECCSSCCSS
T ss_pred cc---cCCCCEEECcCCcCCC
Confidence 54 3468889999998864
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.70 E-value=8.9e-17 Score=155.59 Aligned_cols=163 Identities=26% Similarity=0.416 Sum_probs=126.2
Q ss_pred CCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCE
Q 004195 109 GSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSV 188 (769)
Q Consensus 109 ~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 188 (769)
..+.+|+.|++++|+++. ++ .+..+++|++|+|++|++++..| |+++++|++|++++|.+. .+| .+.++++|+.
T Consensus 37 ~~l~~l~~L~l~~~~i~~-l~-~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~-~~~-~l~~l~~L~~ 110 (199)
T d2omxa2 37 TDLDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIA-DIT-PLANLTNLTG 110 (199)
T ss_dssp HHHTTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC-CCG-GGTTCTTCSE
T ss_pred HHhcCCCEEECCCCCCCC-cc-ccccCCCcCcCccccccccCccc--ccCCcccccccccccccc-ccc-cccccccccc
Confidence 457788999999998864 33 48889999999999999986433 889999999999999887 344 4888999999
Q ss_pred EeccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCc
Q 004195 189 LSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGL 268 (769)
Q Consensus 189 L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i 268 (769)
|++++|.+... ..+.++++|+.|++++|++.. ++.+..+++|+.|++.+|.+++ +
T Consensus 111 L~l~~~~~~~~--~~~~~l~~L~~L~l~~n~l~~-~~~l~~~~~L~~L~l~~n~l~~----------------------l 165 (199)
T d2omxa2 111 LTLFNNQITDI--DPLKNLTNLNRLELSSNTISD-ISALSGLTSLQQLNFSSNQVTD----------------------L 165 (199)
T ss_dssp EECCSSCCCCC--GGGTTCTTCSEEECCSSCCCC-CGGGTTCTTCSEEECCSSCCCC----------------------C
T ss_pred ccccccccccc--cccchhhhhHHhhhhhhhhcc-cccccccccccccccccccccC----------------------C
Confidence 99999988753 357889999999999999874 5567788888888877776642 2
Q ss_pred CchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEE
Q 004195 269 NPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYL 306 (769)
Q Consensus 269 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 306 (769)
..+..+++|++|++++|+++. + +.+.++++|+.|
T Consensus 166 --~~l~~l~~L~~L~ls~N~i~~-i-~~l~~L~~L~~L 199 (199)
T d2omxa2 166 --KPLANLTTLERLDISSNKVSD-I-SVLAKLTNLESL 199 (199)
T ss_dssp --GGGTTCTTCCEEECCSSCCCC-C-GGGGGCTTCSEE
T ss_pred --ccccCCCCCCEEECCCCCCCC-C-ccccCCCCCCcC
Confidence 236677788888888888765 2 346777777765
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=99.59 E-value=9.6e-14 Score=146.14 Aligned_cols=229 Identities=27% Similarity=0.328 Sum_probs=144.1
Q ss_pred CCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEec
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL 191 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 191 (769)
.+|++|||++|+++ .+|+. +++|++|+|++|+|+ .+|..+ .+|+.|++++|+++ .++.. .++|++|+|
T Consensus 38 ~~l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~-~l~~l---p~~L~~L~L 105 (353)
T d1jl5a_ 38 RQAHELELNNLGLS-SLPEL---PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLK-ALSDL---PPLLEYLGV 105 (353)
T ss_dssp HTCSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCS-CCCSC---CTTCCEEEC
T ss_pred cCCCEEEeCCCCCC-CCCCC---CCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccc-hhhhh---ccccccccc
Confidence 46899999999996 57864 468999999999999 688764 57899999999987 44432 246999999
Q ss_pred cCCCCcccCCccccCCCCCCEEEccCccccccCCC-------------------CCCCccCcEEeccCCcCCCCCccccc
Q 004195 192 KNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-------------------LRNLKNLRVFDVQDNYFGPRFPRLHK 252 (769)
Q Consensus 192 ~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-------------------l~~l~~L~~l~l~~N~l~~~~p~~~~ 252 (769)
++|.++. +|. ++.+++|+.|++++|.++..... +..++.++.+++..|.+... +....
T Consensus 106 ~~n~l~~-lp~-~~~l~~L~~L~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~l~~l~~l~~L~l~~n~~~~~-~~~~~ 182 (353)
T d1jl5a_ 106 SNNQLEK-LPE-LQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKKL-PDLPL 182 (353)
T ss_dssp CSSCCSS-CCC-CTTCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSSC-CCCCT
T ss_pred ccccccc-ccc-hhhhccceeeccccccccccccccccccchhhccccccccccccccccceeccccccccccc-ccccc
Confidence 9999984 564 68899999999999988754432 34456667777777765432 11111
Q ss_pred CCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccC-----------------CCCCCCCEEEccCCcCCc
Q 004195 253 KMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSL-----------------LSLPSITYLDIHGNKLTG 315 (769)
Q Consensus 253 ~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~-----------------~~l~~L~~L~l~~N~l~~ 315 (769)
....+...++.+. . ...+..++.|+.+++++|.... ++... ...+.+...++..|.+.+
T Consensus 183 ~~~~l~~~~~~~~-~--~~~~~~l~~L~~l~l~~n~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 258 (353)
T d1jl5a_ 183 SLESIVAGNNILE-E--LPELQNLPFLTTIYADNNLLKT-LPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSG 258 (353)
T ss_dssp TCCEEECCSSCCS-S--CCCCTTCTTCCEEECCSSCCSS-CCSCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSE
T ss_pred ccccccccccccc-c--cccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccc
Confidence 2222333322222 1 1123344445555555444332 11110 011233444444433332
Q ss_pred c----------------ccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCCh
Q 004195 316 L----------------LLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 316 ~----------------~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 363 (769)
. +......+++|++|+|++|+++ .+|.. .++++.|++++|+++.
T Consensus 259 l~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~L~~N~L~~ 318 (353)
T d1jl5a_ 259 LSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPAL---PPRLERLIASFNHLAE 318 (353)
T ss_dssp ESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCSC
T ss_pred cccccchhcccccccCccccccccCCCCCEEECCCCccC-ccccc---cCCCCEEECCCCcCCc
Confidence 1 1111233578999999999998 56754 4578889999998863
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.56 E-value=4.3e-15 Score=131.21 Aligned_cols=104 Identities=30% Similarity=0.326 Sum_probs=86.1
Q ss_pred cEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCC
Q 004195 115 KVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNN 194 (769)
Q Consensus 115 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 194 (769)
|+|+|++|+++ .+| .+.++++|++||+++|+|+ .+|+.|+.+++|++|++++|+|+. +| .+..+++|++|++++|
T Consensus 1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc-cC-ccccccccCeEECCCC
Confidence 57899999996 344 4888999999999999998 578888999999999999999984 44 4888999999999999
Q ss_pred CCcccC-CccccCCCCCCEEEccCcccccc
Q 004195 195 SLSGFL-PVSLTGLQSLRVVSLSANHLSGE 223 (769)
Q Consensus 195 ~l~~~~-p~~l~~l~~L~~L~ls~N~l~~~ 223 (769)
+++... ...++++++|+.|++++|+++..
T Consensus 76 ~i~~~~~~~~l~~~~~L~~L~l~~N~i~~~ 105 (124)
T d1dcea3 76 RLQQSAAIQPLVSCPRLVLLNLQGNSLCQE 105 (124)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGGGGS
T ss_pred ccCCCCCchhhcCCCCCCEEECCCCcCCcC
Confidence 988543 25788889999999999988753
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=4.9e-15 Score=137.57 Aligned_cols=129 Identities=21% Similarity=0.230 Sum_probs=100.9
Q ss_pred ccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCC
Q 004195 107 TLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVL 186 (769)
Q Consensus 107 ~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 186 (769)
.+.++.+|+.|+|++|+++. +|..+..+++|++|||++|.|+. ++ .|..+++|++|+|++|+++...+..+..+++|
T Consensus 13 ~~~n~~~lr~L~L~~n~I~~-i~~~~~~l~~L~~L~Ls~N~i~~-l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L 89 (162)
T d1a9na_ 13 QYTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRK-LD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 89 (162)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCE-EC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred hccCcCcCcEEECCCCCCCc-cCccccccccCCEEECCCCCCCc-cC-CcccCcchhhhhcccccccCCCcccccccccc
Confidence 45677889999999999865 47677888999999999999984 54 58889999999999999986666667788999
Q ss_pred CEEeccCCCCcccCC-ccccCCCCCCEEEccCccccccCC----CCCCCccCcEEec
Q 004195 187 SVLSLKNNSLSGFLP-VSLTGLQSLRVVSLSANHLSGEIP----DLRNLKNLRVFDV 238 (769)
Q Consensus 187 ~~L~L~~N~l~~~~p-~~l~~l~~L~~L~ls~N~l~~~~p----~l~~l~~L~~l~l 238 (769)
+.|+|++|+++.... ..+.++++|++|++++|.++.... .+..+++|++||.
T Consensus 90 ~~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~~~~~~r~~~i~~lp~L~~LD~ 146 (162)
T d1a9na_ 90 TELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDF 146 (162)
T ss_dssp CEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETT
T ss_pred ccceeccccccccccccccccccccchhhcCCCccccccchHHHHHHHCCCcCeeCC
Confidence 999999999874322 467888999999999998875432 1566777777763
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.47 E-value=9e-14 Score=122.56 Aligned_cols=101 Identities=25% Similarity=0.379 Sum_probs=86.4
Q ss_pred ceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCc
Q 004195 139 EILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSAN 218 (769)
Q Consensus 139 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N 218 (769)
|+|||++|+|+ .+| .+..+++|++|+|++|+|+ .+|+.|+.+++|++|++++|.++. +| .++++++|+.|++++|
T Consensus 1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc-cC-ccccccccCeEECCCC
Confidence 68999999998 455 5899999999999999998 678889999999999999999995 44 5899999999999999
Q ss_pred cccccC--CCCCCCccCcEEeccCCcCC
Q 004195 219 HLSGEI--PDLRNLKNLRVFDVQDNYFG 244 (769)
Q Consensus 219 ~l~~~~--p~l~~l~~L~~l~l~~N~l~ 244 (769)
+++... ..+..+++|+.+++++|.+.
T Consensus 76 ~i~~~~~~~~l~~~~~L~~L~l~~N~i~ 103 (124)
T d1dcea3 76 RLQQSAAIQPLVSCPRLVLLNLQGNSLC 103 (124)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred ccCCCCCchhhcCCCCCCEEECCCCcCC
Confidence 998643 24777888888888888775
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.47 E-value=4.1e-15 Score=152.15 Aligned_cols=182 Identities=18% Similarity=0.211 Sum_probs=101.5
Q ss_pred CCCcCceeeccCcccCCc-CCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCC-CCccc-CCccccCCCCC
Q 004195 134 HSSSLEILNLSSNYLSGS-IPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNN-SLSGF-LPVSLTGLQSL 210 (769)
Q Consensus 134 ~l~~L~~L~Ls~N~l~g~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~l~~l~~L 210 (769)
...+|++|||++|.++.. ++..+..+++|++|+|++|.++...+..++.+++|++|+|+++ .++.. +..-+.++++|
T Consensus 44 ~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L 123 (284)
T d2astb2 44 SPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRL 123 (284)
T ss_dssp CCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTC
T ss_pred cCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhc
Confidence 344556666665555432 2333455556666666655555555555555555555555552 33311 11112345555
Q ss_pred CEEEccCc-ccccc-CC-CCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCcc--ccCCcCchhhcCCCcCcEEecc
Q 004195 211 RVVSLSAN-HLSGE-IP-DLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNR--FQFGLNPDELRSYNQLQKLDIS 285 (769)
Q Consensus 211 ~~L~ls~N-~l~~~-~p-~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~--~~~~i~p~~~~~l~~L~~L~Ls 285 (769)
++|+++++ .++.. +. .+. ...+.|+.|++++.. ++.......+..+++|++|+++
T Consensus 124 ~~L~ls~c~~~~~~~~~~~~~--------------------~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~ 183 (284)
T d2astb2 124 DELNLSWCFDFTEKHVQVAVA--------------------HVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLS 183 (284)
T ss_dssp CEEECCCCTTCCHHHHHHHHH--------------------HSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECT
T ss_pred cccccccccccccccchhhhc--------------------ccccccchhhhcccccccccccccccccccccccccccc
Confidence 55555543 22210 00 011 112345555555432 2211002334567888888888
Q ss_pred Cc-cccccCCccCCCCCCCCEEEccC-CcCCccccccCCCCCCCcEEEccCC
Q 004195 286 LN-RFVGPFIPSLLSLPSITYLDIHG-NKLTGLLLQNMSCNPQLAFVDLSSN 335 (769)
Q Consensus 286 ~N-~l~~~~~~~~~~l~~L~~L~l~~-N~l~~~~~~~~~~l~~L~~l~l~~N 335 (769)
+| .++...+..+.++++|++|+|++ +.++......++.+++|+.|+++++
T Consensus 184 ~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 184 DSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp TCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred cccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 75 46666677788888899999988 4677766677788888999988876
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.47 E-value=3.1e-14 Score=132.08 Aligned_cols=111 Identities=20% Similarity=0.202 Sum_probs=91.6
Q ss_pred cccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCC
Q 004195 131 SIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSL 210 (769)
Q Consensus 131 ~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L 210 (769)
.+.+..+|+.|||++|+|+ .+|..+..+++|++|+|++|+|+. ++ .|..+++|++|+|++|+++...+..+..+++|
T Consensus 13 ~~~n~~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~~-l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L 89 (162)
T d1a9na_ 13 QYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRK-LD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 89 (162)
T ss_dssp EEECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCE-EC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred hccCcCcCcEEECCCCCCC-ccCccccccccCCEEECCCCCCCc-cC-CcccCcchhhhhcccccccCCCcccccccccc
Confidence 4678889999999999998 567777889999999999999984 44 58899999999999999997766667789999
Q ss_pred CEEEccCcccccc--CCCCCCCccCcEEeccCCcCC
Q 004195 211 RVVSLSANHLSGE--IPDLRNLKNLRVFDVQDNYFG 244 (769)
Q Consensus 211 ~~L~ls~N~l~~~--~p~l~~l~~L~~l~l~~N~l~ 244 (769)
+.|++++|+++.. +..+..+++|+.+++++|.++
T Consensus 90 ~~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~ 125 (162)
T d1a9na_ 90 TELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT 125 (162)
T ss_dssp CEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred ccceeccccccccccccccccccccchhhcCCCccc
Confidence 9999999998753 234667777777777777653
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.46 E-value=1.1e-15 Score=167.37 Aligned_cols=135 Identities=19% Similarity=0.144 Sum_probs=81.7
Q ss_pred CCccCcEEeccCCcCCCCCcc-------cccCCcEEEeCCccccCCcCchh----h-cCCCcCcEEeccCccccccCCcc
Q 004195 229 NLKNLRVFDVQDNYFGPRFPR-------LHKKMVTLVLRNNRFQFGLNPDE----L-RSYNQLQKLDISLNRFVGPFIPS 296 (769)
Q Consensus 229 ~l~~L~~l~l~~N~l~~~~p~-------~~~~L~~L~l~~N~~~~~i~p~~----~-~~l~~L~~L~Ls~N~l~~~~~~~ 296 (769)
....|+.+++++|.+...... ....+..+++++|.++... ... + .....|+.+++++|.++......
T Consensus 253 ~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~-~~~l~~~l~~~~~~L~~l~l~~~~l~~~~~~~ 331 (460)
T d1z7xw1 253 PSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEG-ARLLCETLLEPGCQLESLWVKSCSFTAACCSH 331 (460)
T ss_dssp TTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHH-HHHHHHHHTSTTCCCCEEECTTSCCBGGGHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccc-cchhhccccccccccccccccccchhhhhhhh
Confidence 345788888988877543211 1356778888888765211 111 1 12346778888887776543222
Q ss_pred ----CCCCCCCCEEEccCCcCCcc----ccccCC-CCCCCcEEEccCCcCCC----CCCccccccCCCceEECCCCCCCh
Q 004195 297 ----LLSLPSITYLDIHGNKLTGL----LLQNMS-CNPQLAFVDLSSNLLTG----YLPSCLQVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 297 ----~~~l~~L~~L~l~~N~l~~~----~~~~~~-~l~~L~~l~l~~N~l~g----~~p~~~~~~~~l~~l~l~~N~l~~ 363 (769)
+...++|++|+|++|+++.. +...+. ..+.|+.|+|++|.++. .++..+..+++++.|++++|+++.
T Consensus 332 l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~N~i~~ 411 (460)
T d1z7xw1 332 FSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 411 (460)
T ss_dssp HHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred cccccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCChHHHHHHHHHHhcCCCCCEEECCCCcCCH
Confidence 23445778888888877642 222332 34667888888887763 233445556777888888887765
Q ss_pred h
Q 004195 364 E 364 (769)
Q Consensus 364 ~ 364 (769)
.
T Consensus 412 ~ 412 (460)
T d1z7xw1 412 A 412 (460)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.39 E-value=8.3e-14 Score=142.26 Aligned_cols=214 Identities=21% Similarity=0.223 Sum_probs=145.5
Q ss_pred CCCCCCcEEEeecccccCC-CCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccC-cCCcc-CCccCcCCcC
Q 004195 109 GSLSSLKVLSLVSLGLWGP-LPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDN-KFTGA-VPSELSLLQV 185 (769)
Q Consensus 109 ~~l~~L~~L~L~~n~l~g~-~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~ 185 (769)
....+|++|||+++.++.. ++..+.++++|++|+|++|.++...+..++.+++|++|+|+++ .++.. +..-+.++++
T Consensus 43 ~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~ 122 (284)
T d2astb2 43 FSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSR 122 (284)
T ss_dssp CCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTT
T ss_pred ccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHh
Confidence 4457899999999988654 4566889999999999999999888899999999999999995 55521 2333467899
Q ss_pred CCEEeccCC-CCcc-cCCccccC-CCCCCEEEccCc--ccccc-CCC-CCCCccCcEEeccCCcCCCCCcccccCCcEEE
Q 004195 186 LSVLSLKNN-SLSG-FLPVSLTG-LQSLRVVSLSAN--HLSGE-IPD-LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLV 258 (769)
Q Consensus 186 L~~L~L~~N-~l~~-~~p~~l~~-l~~L~~L~ls~N--~l~~~-~p~-l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~ 258 (769)
|++|+++++ .++. .++..+.. .++|+.|+++++ .++.. +.. ..++++|+.|++++|.
T Consensus 123 L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~---------------- 186 (284)
T d2astb2 123 LDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSV---------------- 186 (284)
T ss_dssp CCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCT----------------
T ss_pred ccccccccccccccccchhhhcccccccchhhhccccccccccccccccccccccccccccccc----------------
Confidence 999999985 4442 12223333 478999999864 33321 111 2345566666665542
Q ss_pred eCCccccCCcCchhhcCCCcCcEEeccC-ccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcC
Q 004195 259 LRNNRFQFGLNPDELRSYNQLQKLDISL-NRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLL 337 (769)
Q Consensus 259 l~~N~~~~~i~p~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l 337 (769)
.++... ...+..+++|++|+|++ +.++......++++++|+.|+++++--.+.+......+|+|+ +..+.+
T Consensus 187 ----~itd~~-~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~~~d~~l~~l~~~lp~L~---i~~~~l 258 (284)
T d2astb2 187 ----MLKNDC-FQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQ---INCSHF 258 (284)
T ss_dssp ----TCCGGG-GGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTSSCTTCHHHHHHHSTTSE---ESCCCS
T ss_pred ----CCCchh-hhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCCCCHHHHHHHHHhCcccc---ccCccC
Confidence 123222 55677888999999998 467766666788889999999988722222222223455554 466777
Q ss_pred CCCCCcccc
Q 004195 338 TGYLPSCLQ 346 (769)
Q Consensus 338 ~g~~p~~~~ 346 (769)
+...++.++
T Consensus 259 s~~~~~~~~ 267 (284)
T d2astb2 259 TTIARPTIG 267 (284)
T ss_dssp CCTTCSSCS
T ss_pred CCCCCCccC
Confidence 766555544
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.38 E-value=2.3e-14 Score=150.96 Aligned_cols=236 Identities=22% Similarity=0.181 Sum_probs=115.5
Q ss_pred ccCCCCCCcEEEeecccccCC----CCccccCCCcCceeeccCcccCCc----------CCccccCCCcCCEEEcccCcC
Q 004195 107 TLGSLSSLKVLSLVSLGLWGP----LPGSIAHSSSLEILNLSSNYLSGS----------IPVQISSLRNLQTLILDDNKF 172 (769)
Q Consensus 107 ~~~~l~~L~~L~L~~n~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~----------~p~~~~~l~~L~~L~L~~N~l 172 (769)
.+.+.+.|+.|+|++|.+... +-..+...++|+.|+++++.+... +...+..+++|+.|+|++|.+
T Consensus 26 ~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~i 105 (344)
T d2ca6a1 26 VLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAF 105 (344)
T ss_dssp HHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCC
T ss_pred HHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCccccccccccc
Confidence 445556666677766665321 223455566666666665543311 112233455566666666655
Q ss_pred Ccc----CCccCcCCcCCCEEeccCCCCcccCCcc-------------ccCCCCCCEEEccCccccccCC-----CCCCC
Q 004195 173 TGA----VPSELSLLQVLSVLSLKNNSLSGFLPVS-------------LTGLQSLRVVSLSANHLSGEIP-----DLRNL 230 (769)
Q Consensus 173 ~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~-------------l~~l~~L~~L~ls~N~l~~~~p-----~l~~l 230 (769)
+.. +...+...++|++|++++|.++..-... ....+.|+.|++++|+++..-- .+...
T Consensus 106 ~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~ 185 (344)
T d2ca6a1 106 GPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSH 185 (344)
T ss_dssp CTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHC
T ss_pred ccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccchhhhh
Confidence 432 2222334455555555555543110000 1123444455555444431100 01223
Q ss_pred ccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCC----cCchhhcCCCcCcEEeccCcccccc----CCccCCCCCC
Q 004195 231 KNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFG----LNPDELRSYNQLQKLDISLNRFVGP----FIPSLLSLPS 302 (769)
Q Consensus 231 ~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~----i~p~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~ 302 (769)
+ .++.|+|++|.++.. +....+..+++|+.|+|++|.++.. +...+..+++
T Consensus 186 ~---------------------~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~ 244 (344)
T d2ca6a1 186 R---------------------LLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPN 244 (344)
T ss_dssp T---------------------TCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTT
T ss_pred h---------------------hhcccccccccccccccccchhhhhcchhhhccccccccccccccccccccccccccc
Confidence 3 455555555544310 0022345566677777777766432 2234556667
Q ss_pred CCEEEccCCcCCccccc----cCC--CCCCCcEEEccCCcCCCC----CCcccc-ccCCCceEECCCCCCCh
Q 004195 303 ITYLDIHGNKLTGLLLQ----NMS--CNPQLAFVDLSSNLLTGY----LPSCLQ-VEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 303 L~~L~l~~N~l~~~~~~----~~~--~l~~L~~l~l~~N~l~g~----~p~~~~-~~~~l~~l~l~~N~l~~ 363 (769)
|++|+|++|.+++.-.. .+. ..+.|+.||+++|+++.. +...+. ..+.++.+++++|+++.
T Consensus 245 L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~ 316 (344)
T d2ca6a1 245 LRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 316 (344)
T ss_dssp CCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred chhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCC
Confidence 77777777776653222 121 235577777777776531 122221 34567777777777643
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.36 E-value=9.4e-15 Score=159.79 Aligned_cols=277 Identities=20% Similarity=0.189 Sum_probs=184.9
Q ss_pred CeeEEEeCCCCCCCCCCCCCCCCCCCccccccCCCCCCcEEEeecccccC----CCCccccCCCcCceeeccCcccCCc-
Q 004195 77 NLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWG----PLPGSIAHSSSLEILNLSSNYLSGS- 151 (769)
Q Consensus 77 ~v~~l~l~~~~~~~~~~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~- 151 (769)
+++.|+++++..+. ..+...+..+++|++|+|++|+++. .+...+..+++|++|||++|.|+..
T Consensus 3 ~l~~ld~~~~~i~~-----------~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~ 71 (460)
T d1z7xw1 3 DIQSLDIQCEELSD-----------ARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVG 71 (460)
T ss_dssp EEEEEEEESCCCCH-----------HHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHH
T ss_pred CCCEEEeeCCcCCh-----------HHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHH
Confidence 57888887766543 1123346678999999999999862 3556678999999999999998631
Q ss_pred ---CCcccc-CCCcCCEEEcccCcCCcc----CCccCcCCcCCCEEeccCCCCcccCCc---------------------
Q 004195 152 ---IPVQIS-SLRNLQTLILDDNKFTGA----VPSELSLLQVLSVLSLKNNSLSGFLPV--------------------- 202 (769)
Q Consensus 152 ---~p~~~~-~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~--------------------- 202 (769)
+...+. ...+|++|+|++|+++.. ++..+..+++|++|+|++|.++.....
T Consensus 72 ~~~l~~~l~~~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~~~~~~l~~~l~~~~~~~~~~~~~~~ 151 (460)
T d1z7xw1 72 VHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYC 151 (460)
T ss_dssp HHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTS
T ss_pred HHHHHHHHhcCCCCCCEEECCCCCccccccccccchhhccccccccccccccchhhhhhhhhhccccccccccccccccc
Confidence 222332 235799999999999753 466788899999999999987531100
Q ss_pred ------------cccCCCCCCEEEccCcccccc-----------CCC-----------------------CCCCccCcEE
Q 004195 203 ------------SLTGLQSLRVVSLSANHLSGE-----------IPD-----------------------LRNLKNLRVF 236 (769)
Q Consensus 203 ------------~l~~l~~L~~L~ls~N~l~~~-----------~p~-----------------------l~~l~~L~~l 236 (769)
.+.....++.++++.+..... .+. +.....++.+
T Consensus 152 ~~~~~~~~~~~~~l~~~~~~~~~~ls~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~l 231 (460)
T d1z7xw1 152 SLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLREL 231 (460)
T ss_dssp CCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEE
T ss_pred ccchhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhccccccccccccccc
Confidence 011235566777766543210 000 1234556777
Q ss_pred eccCCcCCCC--------CcccccCCcEEEeCCccccCCc---CchhhcCCCcCcEEeccCccccccCCcc-----CCCC
Q 004195 237 DVQDNYFGPR--------FPRLHKKMVTLVLRNNRFQFGL---NPDELRSYNQLQKLDISLNRFVGPFIPS-----LLSL 300 (769)
Q Consensus 237 ~l~~N~l~~~--------~p~~~~~L~~L~l~~N~~~~~i---~p~~~~~l~~L~~L~Ls~N~l~~~~~~~-----~~~l 300 (769)
+++.|.+... .......+..+++++|.+.... ....+...+.++.+++++|.+....... ....
T Consensus 232 ~~~~n~~~~~~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~~l~~~~ 311 (460)
T d1z7xw1 232 ALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPG 311 (460)
T ss_dssp ECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTT
T ss_pred chhhccccccccchhhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhhccccccc
Confidence 7777765321 1112457889999999876321 0234567889999999999986432221 1234
Q ss_pred CCCCEEEccCCcCCccccc----cCCCCCCCcEEEccCCcCCCC----CCcccc-ccCCCceEECCCCCCChh
Q 004195 301 PSITYLDIHGNKLTGLLLQ----NMSCNPQLAFVDLSSNLLTGY----LPSCLQ-VEAKTRLVLYSKNCLSNE 364 (769)
Q Consensus 301 ~~L~~L~l~~N~l~~~~~~----~~~~l~~L~~l~l~~N~l~g~----~p~~~~-~~~~l~~l~l~~N~l~~~ 364 (769)
..|+.+++++|.++..... .+...++|+.|+|++|+++.. ++..+. ..+.++.|++++|.++..
T Consensus 312 ~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~ 384 (460)
T d1z7xw1 312 CQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDS 384 (460)
T ss_dssp CCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHH
T ss_pred cccccccccccchhhhhhhhcccccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCChH
Confidence 6899999999998865433 334567899999999998642 222232 356689999999999754
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.34 E-value=6.3e-14 Score=147.58 Aligned_cols=229 Identities=17% Similarity=0.198 Sum_probs=144.6
Q ss_pred CCCccccCCCcCceeeccCcccCCc----CCccccCCCcCCEEEcccCcCCcc---CC-------ccCcCCcCCCEEecc
Q 004195 127 PLPGSIAHSSSLEILNLSSNYLSGS----IPVQISSLRNLQTLILDDNKFTGA---VP-------SELSLLQVLSVLSLK 192 (769)
Q Consensus 127 ~~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~L~~N~l~~~---~p-------~~~~~l~~L~~L~L~ 192 (769)
.+...+.+...|+.|+|++|.++.. +-..+...++|+.|+++++.+... .| ..+..+++|+.|+|+
T Consensus 22 ~l~~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~ 101 (344)
T d2ca6a1 22 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 101 (344)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCccccccc
Confidence 3455677788899999999988542 334566778899999988765321 11 234566778888888
Q ss_pred CCCCccc----CCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccC-
Q 004195 193 NNSLSGF----LPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQF- 266 (769)
Q Consensus 193 ~N~l~~~----~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~- 266 (769)
+|.++.. +...+...++|+.|++++|.+...-.. +.. .|..+.... .......|..+.+++|.++-
T Consensus 102 ~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~--~l~~~~~~~------~~~~~~~L~~l~l~~n~i~~~ 173 (344)
T d2ca6a1 102 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIAR--ALQELAVNK------KAKNAPPLRSIICGRNRLENG 173 (344)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHH--HHHHHHHHH------HHHTCCCCCEEECCSSCCTGG
T ss_pred ccccccccccchhhhhcccccchheecccccccccccccccc--ccccccccc------ccccCcccceeeccccccccc
Confidence 8877653 223444567778888877776421000 000 000000000 00012244555555555431
Q ss_pred ---CcCchhhcCCCcCcEEeccCcccccc-----CCccCCCCCCCCEEEccCCcCCcc----ccccCCCCCCCcEEEccC
Q 004195 267 ---GLNPDELRSYNQLQKLDISLNRFVGP-----FIPSLLSLPSITYLDIHGNKLTGL----LLQNMSCNPQLAFVDLSS 334 (769)
Q Consensus 267 ---~i~p~~~~~l~~L~~L~Ls~N~l~~~-----~~~~~~~l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~l~l~~ 334 (769)
.+ ...+..++.|++|+|++|.+... +...+..+++|+.|+|++|.++.. +...+..+++|+.|+|++
T Consensus 174 ~~~~l-~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~ 252 (344)
T d2ca6a1 174 SMKEW-AKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLND 252 (344)
T ss_dssp GHHHH-HHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTT
T ss_pred ccccc-cchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhc
Confidence 11 33456778999999999998642 334567789999999999998653 345677889999999999
Q ss_pred CcCCCCCCccc----c--ccCCCceEECCCCCCChh
Q 004195 335 NLLTGYLPSCL----Q--VEAKTRLVLYSKNCLSNE 364 (769)
Q Consensus 335 N~l~g~~p~~~----~--~~~~l~~l~l~~N~l~~~ 364 (769)
|.++..-...+ . ....++.+++++|.++..
T Consensus 253 n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~ 288 (344)
T d2ca6a1 253 CLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELD 288 (344)
T ss_dssp CCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHH
T ss_pred CccCchhhHHHHHHhhhccCCCCCEEECCCCcCChH
Confidence 99875322222 1 235689999999998754
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.32 E-value=1.2e-14 Score=139.70 Aligned_cols=128 Identities=26% Similarity=0.344 Sum_probs=103.5
Q ss_pred ccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCc
Q 004195 105 FSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQ 184 (769)
Q Consensus 105 ~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 184 (769)
+.++..|++|+.|+|++|+++. ++ .|.++++|++|+|++|+|+ .+|..+..+++|++|++++|+++. + +.+..++
T Consensus 41 ~~sl~~L~~L~~L~Ls~n~I~~-i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~-l-~~~~~l~ 115 (198)
T d1m9la_ 41 DATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-L-SGIEKLV 115 (198)
T ss_dssp HHHHHHTTTCCEEECSEEEESC-CC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCC-H-HHHHHHH
T ss_pred hhHHhcccccceeECcccCCCC-cc-cccCCccccChhhcccccc-cccccccccccccccccccccccc-c-ccccccc
Confidence 4578889999999999999974 45 5899999999999999998 577666777889999999999984 3 3588899
Q ss_pred CCCEEeccCCCCcccCC-ccccCCCCCCEEEccCccccccCCC-----------CCCCccCcEEe
Q 004195 185 VLSVLSLKNNSLSGFLP-VSLTGLQSLRVVSLSANHLSGEIPD-----------LRNLKNLRVFD 237 (769)
Q Consensus 185 ~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~ls~N~l~~~~p~-----------l~~l~~L~~l~ 237 (769)
+|++|+|++|+++.... ..+.++++|+.|+|++|.++...+. +..+++|+.||
T Consensus 116 ~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~r~~vi~~lp~L~~LD 180 (198)
T d1m9la_ 116 NLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD 180 (198)
T ss_dssp HSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHHHCTTTTHHHHHHHHHHHCSSCCEES
T ss_pred cccccccccchhccccccccccCCCccceeecCCCccccCcccccchhhHHHHHHHHCCCcCEeC
Confidence 99999999999985422 4688999999999999998766554 23456666665
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.28 E-value=3.3e-14 Score=136.66 Aligned_cols=89 Identities=22% Similarity=0.359 Sum_probs=52.1
Q ss_pred CCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCC
Q 004195 128 LPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGL 207 (769)
Q Consensus 128 ~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l 207 (769)
+|..++.|++|++|+|++|+|+ .++ .|.+|++|++|+|++|+|+ .+|..+..+++|+.|++++|+++.. ..+.++
T Consensus 40 l~~sl~~L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~l--~~~~~l 114 (198)
T d1m9la_ 40 MDATLSTLKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIASL--SGIEKL 114 (198)
T ss_dssp CHHHHHHTTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCCH--HHHHHH
T ss_pred hhhHHhcccccceeECcccCCC-Ccc-cccCCccccChhhcccccc-ccccccccccccccccccccccccc--cccccc
Confidence 3455666666666666666666 343 4666666666666666665 4454444455566666666666532 234555
Q ss_pred CCCCEEEccCcccc
Q 004195 208 QSLRVVSLSANHLS 221 (769)
Q Consensus 208 ~~L~~L~ls~N~l~ 221 (769)
++|+.|++++|+++
T Consensus 115 ~~L~~L~L~~N~i~ 128 (198)
T d1m9la_ 115 VNLRVLYMSNNKIT 128 (198)
T ss_dssp HHSSEEEESEEECC
T ss_pred ccccccccccchhc
Confidence 55666666655554
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.28 E-value=1e-11 Score=113.92 Aligned_cols=105 Identities=21% Similarity=0.187 Sum_probs=48.8
Q ss_pred CcEEEeecccccCCCCccccCCCcCceeeccCc-ccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEecc
Q 004195 114 LKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSN-YLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLK 192 (769)
Q Consensus 114 L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N-~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 192 (769)
...++.+++++. ..|..+..+++|+.|++++| .|+...+..|.++++|+.|+|++|+|+...|.+|..+++|++|+|+
T Consensus 10 ~~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls 88 (156)
T d2ifga3 10 SSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (156)
T ss_dssp SSCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CCeEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceecc
Confidence 334555555443 23444555555555555433 2443333445555555555555555554444445555555555555
Q ss_pred CCCCcccCCccccCCCCCCEEEccCccc
Q 004195 193 NNSLSGFLPVSLTGLQSLRVVSLSANHL 220 (769)
Q Consensus 193 ~N~l~~~~p~~l~~l~~L~~L~ls~N~l 220 (769)
+|+|+...+..|.. .+|+.|+|++|.+
T Consensus 89 ~N~l~~l~~~~~~~-~~l~~L~L~~Np~ 115 (156)
T d2ifga3 89 FNALESLSWKTVQG-LSLQELVLSGNPL 115 (156)
T ss_dssp SSCCSCCCSTTTCS-CCCCEEECCSSCC
T ss_pred CCCCcccChhhhcc-ccccccccCCCcc
Confidence 55555322222222 2344444444444
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.24 E-value=1.5e-11 Score=112.84 Aligned_cols=108 Identities=16% Similarity=0.072 Sum_probs=78.4
Q ss_pred CcCceeeccCcccCCcCCccccCCCcCCEEEcccC-cCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEE
Q 004195 136 SSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDN-KFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVS 214 (769)
Q Consensus 136 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 214 (769)
.....++.+++.+. ..|..+..+++|+.|+|++| .++...+..|.++++|+.|+|++|+|+...|.+|.++++|++|+
T Consensus 8 ~~~~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~ 86 (156)
T d2ifga3 8 HGSSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLN 86 (156)
T ss_dssp SSSSCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEE
T ss_pred CCCCeEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCccccccccccccccee
Confidence 34556777777776 56777777788888888655 47765566778888888888888888777777778888888888
Q ss_pred ccCccccccCCCCCCCccCcEEeccCCcCC
Q 004195 215 LSANHLSGEIPDLRNLKNLRVFDVQDNYFG 244 (769)
Q Consensus 215 ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~ 244 (769)
|++|+|+...+......+|+.|++++|.+.
T Consensus 87 Ls~N~l~~l~~~~~~~~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 87 LSFNALESLSWKTVQGLSLQELVLSGNPLH 116 (156)
T ss_dssp CCSSCCSCCCSTTTCSCCCCEEECCSSCCC
T ss_pred ccCCCCcccChhhhccccccccccCCCccc
Confidence 888888765555444456778888888774
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.51 E-value=2.9e-09 Score=97.92 Aligned_cols=105 Identities=20% Similarity=0.210 Sum_probs=58.1
Q ss_pred ccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCcc--CCccCcCCcCCCEEeccCCCCcccCCccccCCCC
Q 004195 132 IAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGA--VPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQS 209 (769)
Q Consensus 132 ~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 209 (769)
+..+..+..|++.+|... .++..+..+++|++|+|++|+|+.. ++..+..+++|+.|+|++|.++...+-.+.+..+
T Consensus 38 l~~~~~~~~l~~~~~~~~-~l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~ 116 (162)
T d1koha1 38 LVAQNIDVVLNRRSSMAA-TLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLK 116 (162)
T ss_dssp TTTTTCCCCTTSHHHHHH-HHHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCC
T ss_pred hhhccchhhcchhhhHhh-hhHHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccc
Confidence 444444555555554443 3444445666777777777776642 2334556677777777777766433323334445
Q ss_pred CCEEEccCccccccCCC--------CCCCccCcEEe
Q 004195 210 LRVVSLSANHLSGEIPD--------LRNLKNLRVFD 237 (769)
Q Consensus 210 L~~L~ls~N~l~~~~p~--------l~~l~~L~~l~ 237 (769)
|+.|++++|.++..... +..+++|+.||
T Consensus 117 L~~L~L~~Npl~~~~~~~~~y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 117 LEELWLDGNSLSDTFRDQSTYISAIRERFPKLLRLD 152 (162)
T ss_dssp CSSCCCTTSTTSSSSSSHHHHHHHHHTTSTTCCEET
T ss_pred cceeecCCCCcCcCcccchhHHHHHHHHCCCCCEEC
Confidence 66677777766654432 34455555554
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.32 E-value=1.6e-08 Score=92.84 Aligned_cols=87 Identities=24% Similarity=0.125 Sum_probs=58.0
Q ss_pred CCccccCCCcCceeeccCcccCCc--CCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCc---
Q 004195 128 LPGSIAHSSSLEILNLSSNYLSGS--IPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPV--- 202 (769)
Q Consensus 128 ~p~~~~~l~~L~~L~Ls~N~l~g~--~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~--- 202 (769)
++..+.++++|++|+|++|+|+.. ++..+..+++|+.|+|++|+|+...+-.+....+|+.|+|++|.++.....
T Consensus 57 l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~ 136 (162)
T d1koha1 57 LRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQST 136 (162)
T ss_dssp HHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHH
T ss_pred hHHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchh
Confidence 344455677788888888888743 234566778888888888888743333444455678888888888755442
Q ss_pred ----cccCCCCCCEEE
Q 004195 203 ----SLTGLQSLRVVS 214 (769)
Q Consensus 203 ----~l~~l~~L~~L~ 214 (769)
.+..+++|+.||
T Consensus 137 y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 137 YISAIRERFPKLLRLD 152 (162)
T ss_dssp HHHHHHTTSTTCCEET
T ss_pred HHHHHHHHCCCCCEEC
Confidence 245678888775
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.31 E-value=2e-06 Score=85.03 Aligned_cols=149 Identities=9% Similarity=-0.030 Sum_probs=97.3
Q ss_pred HHHHHHhcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhcc-CCceeeEeeeeeccCCC
Q 004195 473 DELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLR-HSNLVSALGHCLDFSLD 551 (769)
Q Consensus 473 ~el~~~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~ 551 (769)
.|+.+..+.|...+..+-++.+.||+... +++.+++|+...........+.+|...+..++ +--+.++++++.+.
T Consensus 7 ~~l~~~~~~~~~~~~~~G~s~~~v~rv~~-~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~--- 82 (263)
T d1j7la_ 7 PELKKLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHD--- 82 (263)
T ss_dssp HHHHHHHTTSEEEECSCCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEET---
T ss_pred HHHHHhhhceEEEEcCCCCCCCcEEEEEe-CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecC---
Confidence 45666666776655544444578999875 45567788887655555566888999887774 32345666666543
Q ss_pred CCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCC---------------------------
Q 004195 552 DPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGI--------------------------- 604 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--------------------------- 604 (769)
+..++|||++++.++.+..... .. ...++.++++.++.||+..
T Consensus 83 ----~~~~lv~~~l~G~~~~~~~~~~---~~---~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (263)
T d1j7la_ 83 ----GWSNLLMSEADGVLCSEEYEDE---QS---PEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLAD 152 (263)
T ss_dssp ----TEEEEEEECCSSEEHHHHTTTC---SC---HHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSC
T ss_pred ----CceEEEEEeccccccccccccc---cc---HHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhh
Confidence 2379999999998876544321 11 2223444445555555310
Q ss_pred -----------------------------CCCccccCccccceeeCCCceeeecCCCCch
Q 004195 605 -----------------------------VPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 605 -----------------------------~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
.+.++|+|+.|.||++++++.+-|.||+.+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T d1j7la_ 153 VDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp CCGGGGSTTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred hhhhcccccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhcc
Confidence 1237899999999999987777899998763
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=97.98 E-value=1e-05 Score=79.28 Aligned_cols=75 Identities=9% Similarity=0.081 Sum_probs=51.5
Q ss_pred cccCCc-eeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCC--ceeeEeeeeeccCCCCCCcceEEEEEec
Q 004195 488 MCDASH-GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHS--NLVSALGHCLDFSLDDPSISIIYLIFEY 564 (769)
Q Consensus 488 iG~G~~-g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~--nIv~l~~~~~~~~~~~~~~~~~~lV~Ey 564 (769)
+..|.. +.||+...+++..+++|..... ....+.+|...++.+... -+.++++++.+.+ ..++||||
T Consensus 18 ~~~G~s~~~v~r~~~~~~~~~vlK~~~~~---~~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~-------~~~~v~~~ 87 (255)
T d1nd4a_ 18 QTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAG-------RDWLLLGE 87 (255)
T ss_dssp CSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSS-------CEEEEEEC
T ss_pred cCCcccCCeEEEEEeCCCCEEEEEeCCcc---CHhHHHHHHHHHHHHHhcCCCCCceeeeccccc-------ceEEEEEe
Confidence 344443 6799999888888999976543 234578888888877533 3456676665432 37999999
Q ss_pred cCCCchhh
Q 004195 565 APNETLRS 572 (769)
Q Consensus 565 ~~~gsL~~ 572 (769)
++|.++.+
T Consensus 88 i~G~~~~~ 95 (255)
T d1nd4a_ 88 VPGQDLLS 95 (255)
T ss_dssp CSSEETTT
T ss_pred eecccccc
Confidence 99876543
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.50 E-value=1.2e-05 Score=73.34 Aligned_cols=109 Identities=18% Similarity=0.187 Sum_probs=56.7
Q ss_pred CCCCCcEEEeecc-cccCC----CCccccCCCcCceeeccCcccCCc----CCccccCCCcCCEEEcccCcCCcc----C
Q 004195 110 SLSSLKVLSLVSL-GLWGP----LPGSIAHSSSLEILNLSSNYLSGS----IPVQISSLRNLQTLILDDNKFTGA----V 176 (769)
Q Consensus 110 ~l~~L~~L~L~~n-~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~L~~N~l~~~----~ 176 (769)
+.+.|+.|+|+++ .++.. +-..+...++|++|+|++|.+... +...+...+.|+.|+|++|.++.. +
T Consensus 13 n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l 92 (167)
T d1pgva_ 13 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARL 92 (167)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHH
T ss_pred CCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHH
Confidence 3466777777653 34321 222355666677777777766521 222334456667777777666532 1
Q ss_pred CccCcCCcCCCEEeccCCCCccc-------CCccccCCCCCCEEEccCc
Q 004195 177 PSELSLLQVLSVLSLKNNSLSGF-------LPVSLTGLQSLRVVSLSAN 218 (769)
Q Consensus 177 p~~~~~l~~L~~L~L~~N~l~~~-------~p~~l~~l~~L~~L~ls~N 218 (769)
-..+...++|++|+|++|.+... +...+..-++|+.|+++.+
T Consensus 93 ~~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~ 141 (167)
T d1pgva_ 93 LRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFA 141 (167)
T ss_dssp HHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCC
T ss_pred HHHHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcCC
Confidence 22344555666666666654321 1223333455556655544
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=97.34 E-value=0.00036 Score=72.66 Aligned_cols=76 Identities=5% Similarity=-0.037 Sum_probs=47.9
Q ss_pred cCccccCCceeEEEEEeCC-CcEEEEEEcccc----C---CCChhHHHHHHHHHhhcc-C--CceeeEeeeeeccCCCCC
Q 004195 485 SSFMCDASHGQIYKGKLTD-GTLVAIRSLKMS----K---KSSPHMYTYHIELISKLR-H--SNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 485 ~~~iG~G~~g~Vy~~~~~~-g~~vAvK~~~~~----~---~~~~~~~~~Ei~~l~~l~-H--~nIv~l~~~~~~~~~~~~ 553 (769)
.+.||.|....||++...+ ++.|+||.-... . ....+...+|.+.++.+. + ..+.+++.+..+ .
T Consensus 31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d~~--~--- 105 (392)
T d2pula1 31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDTE--M--- 105 (392)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEETT--T---
T ss_pred EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEEcCC--C---
Confidence 3568999999999999764 678999964321 1 112345667888887663 2 345566654322 1
Q ss_pred CcceEEEEEeccCCCc
Q 004195 554 SISIIYLIFEYAPNET 569 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gs 569 (769)
.++||||+++..
T Consensus 106 ----~~lvmE~L~~~~ 117 (392)
T d2pula1 106 ----AVTVMEDLSHLK 117 (392)
T ss_dssp ----TEEEECCCTTSE
T ss_pred ----CEEEEeccCCcc
Confidence 378999997654
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=97.27 E-value=0.0007 Score=68.47 Aligned_cols=101 Identities=10% Similarity=0.038 Sum_probs=57.6
Q ss_pred cccCHHHHHHHhcCCC---CcCccccCCc-eeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEee
Q 004195 468 RTFTLDELKEATDCFD---SSSFMCDASH-GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALG 543 (769)
Q Consensus 468 ~~~~~~el~~~t~~f~---~~~~iG~G~~-g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~ 543 (769)
..+|.+-+..|.+.+. ..+..--++| -.||+++.++|+.|++|+.+.. ....+++..|...+..+....+.-..-
T Consensus 6 ~~L~pd~i~~al~~~g~~~~~~~~~L~s~EN~vy~v~~~dg~~~VlK~~rp~-~~s~~~i~~E~~~l~~L~~~gipv~~p 84 (325)
T d1zyla1 6 QTLHPDTIMDALFEHGIRVDSGLTPLNSYENRVYQFQDEDRRRFVVKFYRPE-RWTADQILEEHQFALQLVNDEVPVAAP 84 (325)
T ss_dssp CCCCHHHHHHHHHHTTCCCCSCCEEECCSSSEEEEECCTTCCCEEEEEECTT-TSCHHHHHHHHHHHHHHHHTTCSBCCC
T ss_pred cccCHHHHHHHHHHcCCCCCcCccccccccceeEEEEcCCCCEEEEEEeCCC-CCCHHHHHHHHHHHHHHHhcCCCCCCc
Confidence 3455555555544331 1122212222 4799999999999999998754 345677888999988885333311111
Q ss_pred eeeccCCCCCCcceEEEEEeccCCCc
Q 004195 544 HCLDFSLDDPSISIIYLIFEYAPNET 569 (769)
Q Consensus 544 ~~~~~~~~~~~~~~~~lV~Ey~~~gs 569 (769)
...++.......+..+.+++|++|..
T Consensus 85 ~~~~g~~~~~~~~~~~~l~~~~~G~~ 110 (325)
T d1zyla1 85 VAFNGQTLLNHQGFYFAVFPSVGGRQ 110 (325)
T ss_dssp CCBTTBSCEEETTEEEEEEECCCCEE
T ss_pred eecCCCeeeeeeeEEEEEEeecCCcC
Confidence 11111111112345788999998643
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.20 E-value=4e-05 Score=69.74 Aligned_cols=87 Identities=15% Similarity=0.150 Sum_probs=46.0
Q ss_pred CCCcCceeeccCc-ccCCc----CCccccCCCcCCEEEcccCcCCcc----CCccCcCCcCCCEEeccCCCCccc----C
Q 004195 134 HSSSLEILNLSSN-YLSGS----IPVQISSLRNLQTLILDDNKFTGA----VPSELSLLQVLSVLSLKNNSLSGF----L 200 (769)
Q Consensus 134 ~l~~L~~L~Ls~N-~l~g~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~ 200 (769)
+.++|+.|+|+++ .++.. +-..+...++|++|+|++|.+... +...+...+.|++|+|++|.++.. +
T Consensus 13 n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l 92 (167)
T d1pgva_ 13 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARL 92 (167)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHH
T ss_pred CCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHH
Confidence 4566777777763 34321 222355556677777777766421 122334455666666666666532 1
Q ss_pred CccccCCCCCCEEEccCccc
Q 004195 201 PVSLTGLQSLRVVSLSANHL 220 (769)
Q Consensus 201 p~~l~~l~~L~~L~ls~N~l 220 (769)
-..+...++|++|++++|.+
T Consensus 93 ~~aL~~n~sL~~L~l~~n~~ 112 (167)
T d1pgva_ 93 LRSTLVTQSIVEFKADNQRQ 112 (167)
T ss_dssp HHHTTTTCCCSEEECCCCSS
T ss_pred HHHHHhCCcCCEEECCCCcC
Confidence 12344445566666655543
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.58 E-value=0.00014 Score=65.94 Aligned_cols=111 Identities=12% Similarity=0.159 Sum_probs=57.5
Q ss_pred CCCCCCcEEEeec-ccccCC----CCccccCCCcCceeeccCcccCCcC----CccccCCCcCCEEEcccCcCCcc----
Q 004195 109 GSLSSLKVLSLVS-LGLWGP----LPGSIAHSSSLEILNLSSNYLSGSI----PVQISSLRNLQTLILDDNKFTGA---- 175 (769)
Q Consensus 109 ~~l~~L~~L~L~~-n~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~~----p~~~~~l~~L~~L~L~~N~l~~~---- 175 (769)
.+.+.|+.|+|++ +.++.. +-..+...++|+.|+|++|.++..- -..+...+.|+.|++++|.++..
T Consensus 14 ~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~ 93 (166)
T d1io0a_ 14 NNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILA 93 (166)
T ss_dssp TTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHH
T ss_pred hcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHH
Confidence 3456777777775 344321 2233456667777777777665321 12334456666777766665422
Q ss_pred CCccCcCCcCCCEEec--cCCCCcc----cCCccccCCCCCCEEEccCcc
Q 004195 176 VPSELSLLQVLSVLSL--KNNSLSG----FLPVSLTGLQSLRVVSLSANH 219 (769)
Q Consensus 176 ~p~~~~~l~~L~~L~L--~~N~l~~----~~p~~l~~l~~L~~L~ls~N~ 219 (769)
+-..+...++|+.++| +.|.+.. .+...+...++|+.|+++.+.
T Consensus 94 l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~~ 143 (166)
T d1io0a_ 94 LVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQ 143 (166)
T ss_dssp HHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSS
T ss_pred HHHHHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCCC
Confidence 2233455556655333 3444432 122334455556666655443
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.39 E-value=0.0075 Score=60.14 Aligned_cols=161 Identities=12% Similarity=0.062 Sum_probs=84.6
Q ss_pred cCHHHHHHHhcCCCCcCccc-----cCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCcee--eEe
Q 004195 470 FTLDELKEATDCFDSSSFMC-----DASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLV--SAL 542 (769)
Q Consensus 470 ~~~~el~~~t~~f~~~~~iG-----~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv--~l~ 542 (769)
++-+|+......|...+... .|---+.|+.+..+|+ +++|+.... ...++...|++++..+...++. ..+
T Consensus 3 ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~g~-yVLri~~~~--~~~~~l~~~~~~l~~L~~~g~pvp~pi 79 (316)
T d2ppqa1 3 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKDP-LILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPL 79 (316)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSCC-EEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECCCc-EEEEEcCCC--CCHHHHHHHHHHHHhhhhccccccccc
Confidence 46688888888887654443 4555778999887665 889988643 2335667788888877533321 111
Q ss_pred eeeeccCCCCCCcceEEEEEeccCCCchhh--------------hhc------CC---CCCCC-HH--------------
Q 004195 543 GHCLDFSLDDPSISIIYLIFEYAPNETLRS--------------FIS------GP---GYKLT-WV-------------- 584 (769)
Q Consensus 543 ~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~--------------~l~------~~---~~~l~-~~-------------- 584 (769)
.. .++..-.........++.+..+..... .++ .. ..... |.
T Consensus 80 ~~-~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (316)
T d2ppqa1 80 PR-KDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV 158 (316)
T ss_dssp CB-TTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred ee-cCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhc
Confidence 11 111110011233566777766533211 000 00 00000 00
Q ss_pred --HHHHHHHHHHHHhcccc-cCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 585 --QRIAAAIAIVKGVQFLH-TGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 585 --~~~~i~~~ia~gL~yLH-~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
.....+......+.-.+ .....++||+|+.+.||+++.+...-|.||+.+
T Consensus 159 ~~~~~~~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~ 211 (316)
T d2ppqa1 159 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFA 211 (316)
T ss_dssp STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTC
T ss_pred chhHHHHHHHHHHhhhccCccccccccccCCcchhhhhcccccceeEeccccc
Confidence 01111111222222111 123447999999999999999887789999976
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.33 E-value=0.0076 Score=62.31 Aligned_cols=73 Identities=14% Similarity=0.093 Sum_probs=49.7
Q ss_pred cCccccCCceeEEEEEeCCC--------cEEEEEEccccCCCChhHHHHHHHHHhhcc-CCceeeEeeeeeccCCCCCCc
Q 004195 485 SSFMCDASHGQIYKGKLTDG--------TLVAIRSLKMSKKSSPHMYTYHIELISKLR-HSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 485 ~~~iG~G~~g~Vy~~~~~~g--------~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.+.|+.|-.-.+|++..+++ +.|.+++.. . ........+|..+++.+. +.-..++++++.+
T Consensus 47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~-~~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~-------- 116 (395)
T d1nw1a_ 47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-N-PETESHLVAESVIFTLLSERHLGPKLYGIFSG-------- 116 (395)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-S-CCCHHHHHHHHHHHHHHHHTTSSSCEEEEETT--------
T ss_pred EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecC-C-cchhhHHHHHHHHHHHHHhCCCCCeEEEEcCC--------
Confidence 35677788889999987542 456666654 2 334456778999998885 4333477777643
Q ss_pred ceEEEEEeccCCCch
Q 004195 556 SIIYLIFEYAPNETL 570 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL 570 (769)
.+|+||+++..+
T Consensus 117 ---g~I~efi~g~~l 128 (395)
T d1nw1a_ 117 ---GRLEEYIPSRPL 128 (395)
T ss_dssp ---EEEECCCCEEEC
T ss_pred ---ceEEEEeccccC
Confidence 689999987554
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=95.93 E-value=0.00036 Score=63.03 Aligned_cols=89 Identities=17% Similarity=0.207 Sum_probs=50.5
Q ss_pred ccCCCcCceeeccC-cccCCc----CCccccCCCcCCEEEcccCcCCcc----CCccCcCCcCCCEEeccCCCCccc---
Q 004195 132 IAHSSSLEILNLSS-NYLSGS----IPVQISSLRNLQTLILDDNKFTGA----VPSELSLLQVLSVLSLKNNSLSGF--- 199 (769)
Q Consensus 132 ~~~l~~L~~L~Ls~-N~l~g~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~--- 199 (769)
..+.++|++|+|++ |.++.. +-..+...++|++|+|++|.++.. +-..+...++|+.|++++|.++..
T Consensus 13 ~~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~ 92 (166)
T d1io0a_ 13 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 92 (166)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHH
Confidence 34567788888876 445421 223345667777777777776532 222344556777777777766532
Q ss_pred -CCccccCCCCCCEEEc--cCccc
Q 004195 200 -LPVSLTGLQSLRVVSL--SANHL 220 (769)
Q Consensus 200 -~p~~l~~l~~L~~L~l--s~N~l 220 (769)
+-..+...++|+.++| +.|.+
T Consensus 93 ~l~~~l~~~~~L~~l~L~l~~n~i 116 (166)
T d1io0a_ 93 ALVEALQSNTSLIELRIDNQSQPL 116 (166)
T ss_dssp HHHHGGGGCSSCCEEECCCCSSCC
T ss_pred HHHHHHHhCccccEEeeccCCCcC
Confidence 2234455566665444 34444
|