Citrus Sinensis ID: 004198
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 769 | 2.2.26 [Sep-21-2011] | |||||||
| Q8L7U5 | 881 | Serine/threonine-protein | yes | no | 0.953 | 0.832 | 0.812 | 0.0 | |
| Q60EX6 | 883 | Serine/threonine-protein | yes | no | 0.938 | 0.817 | 0.767 | 0.0 | |
| Q9SHS7 | 1006 | Serine/threonine-protein | no | no | 0.941 | 0.719 | 0.594 | 0.0 | |
| Q9SJF0 | 1018 | Serine/threonine-protein | no | no | 0.951 | 0.719 | 0.585 | 0.0 | |
| Q9LR78 | 793 | Serine/threonine-protein | no | no | 0.855 | 0.829 | 0.502 | 0.0 | |
| Q2QM47 | 1009 | Serine/threonine-protein | no | no | 0.457 | 0.348 | 0.633 | 1e-132 | |
| P48485 | 312 | Serine/threonine-protein | no | no | 0.253 | 0.625 | 0.521 | 7e-54 | |
| P48482 | 312 | Serine/threonine-protein | no | no | 0.253 | 0.625 | 0.507 | 3e-53 | |
| P22198 | 316 | Serine/threonine-protein | N/A | no | 0.258 | 0.629 | 0.485 | 2e-52 | |
| O04856 | 317 | Serine/threonine-protein | N/A | no | 0.258 | 0.627 | 0.5 | 6e-52 |
| >sp|Q8L7U5|BSL1_ARATH Serine/threonine-protein phosphatase BSL1 OS=Arabidopsis thaliana GN=BSL1 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 1227 bits (3174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/745 (81%), Positives = 665/745 (89%), Gaps = 12/745 (1%)
Query: 1 MNAKPWLHPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGG 60
M +KPWLHPAP Y+TLET+WD ++DAPGPRC HTLTAVAATKT GPRLILFGGATAIEGG
Sbjct: 1 MGSKPWLHPAPQYKTLETFWDDEDDAPGPRCAHTLTAVAATKTHGPRLILFGGATAIEGG 60
Query: 61 ATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGP 120
+SS PGIRLAGVTN+VH YD+LTRKWTR++PAGEPPSPRAAHAAAAVGTMVVFQGGIGP
Sbjct: 61 -SSSVPGIRLAGVTNTVHSYDILTRKWTRLKPAGEPPSPRAAHAAAAVGTMVVFQGGIGP 119
Query: 121 AGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSD 180
AGHSTDDLYVLD+TNDKFKWHRVVVQG GPGPRYGHVMDLVSQRYLV+V+GNDGKR LSD
Sbjct: 120 AGHSTDDLYVLDMTNDKFKWHRVVVQGDGPGPRYGHVMDLVSQRYLVTVTGNDGKRALSD 179
Query: 181 AWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLM 240
AWALDTAQKPYVWQRLNP+GDRPSARMYA+ SARSDGMFLLCGGRD GAPL DAYGLLM
Sbjct: 180 AWALDTAQKPYVWQRLNPDGDRPSARMYASGSARSDGMFLLCGGRDTLGAPLGDAYGLLM 239
Query: 241 HRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVW 300
HRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHV+GG LRGGR I+ EA+VAVLDTAAGVW
Sbjct: 240 HRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVSGGVLRGGRVIDAEASVAVLDTAAGVW 299
Query: 301 LDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLDDFLVAEN 360
LDRNG VTS+R SKG + DPS ELMRRCRH +AS+G+RIY++GGL+GD+LLDDFLVAEN
Sbjct: 300 LDRNGQVTSARGSKGQIDQDPSFELMRRCRHGAASVGIRIYVHGGLRGDVLLDDFLVAEN 359
Query: 361 SPFQSDVNSPLLTSERAPTHTGSKVNQTNLGYVTTPTPDGLHSPSFG---SLSMDKNSME 417
S FQSD++SPLL S+R + + Y P P G PSF LS+D+NS+E
Sbjct: 360 STFQSDISSPLLASDRT-----QQSSTPRFSYAARP-PSG-SEPSFSMSEGLSLDENSLE 412
Query: 418 KLREASAAEAEAANAVWQAAQAASAVPPEETSVSDDNSQVAEATSDGSDTEADVRLHPRA 477
KL EASAAEAE A++VW+AAQ + EE S SD +S + E+T+DG+ E DVRLHPRA
Sbjct: 413 KLTEASAAEAEVASSVWRAAQLGAGTLDEEPSTSDASSPIVESTTDGTANEGDVRLHPRA 472
Query: 478 VVVAKEAVGNLGGMVRQLSLDQFENESRRMIPLNN-ELSYPTKKFTRQRSPQGLHKKIIS 536
VVVAKE VG+LGGMVRQLSLDQF+NESRRM+P+NN ++ PTKKFTRQ+SPQGLHKK+I+
Sbjct: 473 VVVAKETVGSLGGMVRQLSLDQFQNESRRMVPMNNSDVPQPTKKFTRQKSPQGLHKKVIA 532
Query: 537 TLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDL 596
LLRPRNWK P NR+FFLDSYEVGELCYAAEQIFM E TVLQL+AP+KVFGDLHGQFGDL
Sbjct: 533 ALLRPRNWKPPGNRKFFLDSYEVGELCYAAEQIFMHEQTVLQLKAPIKVFGDLHGQFGDL 592
Query: 597 MRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHE 656
MRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHE
Sbjct: 593 MRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHE 652
Query: 657 AADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHS 716
AADINALFGFRLECIERMGENDGIWAWTRFNQLFN LPLAALIE KIICMHGGIGRSI +
Sbjct: 653 AADINALFGFRLECIERMGENDGIWAWTRFNQLFNYLPLAALIENKIICMHGGIGRSIST 712
Query: 717 VEQIEKLERPITMDAGSIILMDLLW 741
VEQIEK+ERPITMDAGS++LMDLLW
Sbjct: 713 VEQIEKIERPITMDAGSLVLMDLLW 737
|
Phosphatase involved in elongation process, probably by acting as a regulator of brassinolide signaling. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6 |
| >sp|Q60EX6|BSL1_ORYSJ Serine/threonine-protein phosphatase BSL1 homolog OS=Oryza sativa subsp. japonica GN=BSL1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1127 bits (2916), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 572/745 (76%), Positives = 634/745 (85%), Gaps = 23/745 (3%)
Query: 6 WLHPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSA 65
W+ PAP+YR +E + +D+PG RCGH+LT VA TK GPRLILFGGATAIE GA+S
Sbjct: 9 WVVPAPAYREVEGWEGAGDDSPGFRCGHSLTVVAPTKGHGPRLILFGGATAIEAGASSGM 68
Query: 66 PGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHST 125
PGIRLAGVTNSVH YDV TR+WTR+ PAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHST
Sbjct: 69 PGIRLAGVTNSVHSYDVDTRRWTRLHPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHST 128
Query: 126 DDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALD 185
DDLYVLDLTNDKFKWHRVVVQG GPGPRYGH MDLV+QRYLV+VSGNDGKRVLSDAWALD
Sbjct: 129 DDLYVLDLTNDKFKWHRVVVQGAGPGPRYGHCMDLVAQRYLVTVSGNDGKRVLSDAWALD 188
Query: 186 TAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQ 245
TAQKPY WQ+LNP+GDRPSARMYATASAR+DGM LLCGGRDASG PL+DAYGLLMH +GQ
Sbjct: 189 TAQKPYRWQKLNPDGDRPSARMYATASARTDGMLLLCGGRDASGMPLSDAYGLLMHTSGQ 248
Query: 246 WEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNG 305
WEWTLAPGV+PSPRYQHAAVFVGARLHVTGG LRGGRAIEGE A+AVLDTAAGVWLDRNG
Sbjct: 249 WEWTLAPGVSPSPRYQHAAVFVGARLHVTGGVLRGGRAIEGEGAIAVLDTAAGVWLDRNG 308
Query: 306 LVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLDDFLVAENSPFQS 365
+VT SRT K +HD S +L+RRCRHA+AS+G +IYIYGGL+GDILLDDFLVA+N+P QS
Sbjct: 309 IVT-SRTLKSSHDHDASSDLLRRCRHAAASVGTQIYIYGGLRGDILLDDFLVADNAPIQS 367
Query: 366 DVNSPLLTSERAPTHTGSKVNQTNLGYVTTPTPDGLHSPSFGSLSMDKNSMEKLREASAA 425
+ S + +R P N+ + +PT + S DK S++ L +ASAA
Sbjct: 368 EFTSSMY--DRVP--RAENQNRNHNFNSDSPTTNN---------STDKKSIDMLTQASAA 414
Query: 426 EAEAANAVWQAAQAASAVPPEET--------SVSDDNSQVAEATSDGSDTEADVRLHPRA 477
EAEA +AVW+AAQ AS E++ S + S + E DG E DV+LH RA
Sbjct: 415 EAEAVSAVWRAAQEASHASSEDSLSEGIGSESPLSETSPMPEDLDDGGSLEPDVKLHSRA 474
Query: 478 VVVAKEAVGNLGGMVRQLSLDQFENESRRMIPLNNELSYPTKK-FTRQRSPQGLHKKIIS 536
VVV+KEAVG+LG +VRQLSLDQFENESRRM P +N+ SYP KK RQRSPQGLHKK+IS
Sbjct: 475 VVVSKEAVGDLGCLVRQLSLDQFENESRRMHPSSNDQSYPAKKALNRQRSPQGLHKKVIS 534
Query: 537 TLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDL 596
LL+PRNW+APA R FFLDSYEVGELCYAAEQIFMQEPTVLQL+AP+KVFGDLHGQFGDL
Sbjct: 535 FLLKPRNWRAPAERAFFLDSYEVGELCYAAEQIFMQEPTVLQLKAPIKVFGDLHGQFGDL 594
Query: 597 MRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHE 656
MRLFDEYG+PSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHE
Sbjct: 595 MRLFDEYGYPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHE 654
Query: 657 AADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHS 716
AADINALFGFRLECIERMGE+DGIWAWTRFNQLFN LPLAA+IEKKIICMHGGIGRSI++
Sbjct: 655 AADINALFGFRLECIERMGESDGIWAWTRFNQLFNYLPLAAMIEKKIICMHGGIGRSINT 714
Query: 717 VEQIEKLERPITMDAGSIILMDLLW 741
+EQIEKLERPITMD GSIILMDLLW
Sbjct: 715 IEQIEKLERPITMDVGSIILMDLLW 739
|
Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|Q9SHS7|BSL3_ARATH Serine/threonine-protein phosphatase BSL3 OS=Arabidopsis thaliana GN=BSL3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/797 (59%), Positives = 557/797 (69%), Gaps = 73/797 (9%)
Query: 10 APSYRTLETYWDTDEDAPGPRCGHTLTAVAA------TKTTGPRLILFGGATAIEGGA-- 61
AP+Y + + ED PGPRCGHTLTAV A + GPRLILFGGATA+EG +
Sbjct: 74 APTYSVVNAIIEKKEDGPGPRCGHTLTAVPAVGEEGTSSYIGPRLILFGGATALEGNSGG 133
Query: 62 -----TSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQG 116
++ + GIRLAG T VH YDVL+ KW+R+ P GEPPSPRAAH A AVGTMVV QG
Sbjct: 134 TGTPTSAGSAGIRLAGATADVHCYDVLSNKWSRLTPYGEPPSPRAAHVATAVGTMVVIQG 193
Query: 117 GIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKR 176
GIGPAG S +DL+VLDLT + +WHRVVVQG GPGPRYGHVM LV QRYL+++ GNDGKR
Sbjct: 194 GIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKR 253
Query: 177 VLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAY 236
L+D WALDTA KPY W++L PEG+ P MYATASARSDG+ LLCGGRDA+ PLA AY
Sbjct: 254 PLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAY 313
Query: 237 GLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTA 296
GL HR+G+WEW +APGV+PS RYQHAAVFV ARLHV+GGAL GGR +E ++VAVLDTA
Sbjct: 314 GLAKHRDGRWEWAIAPGVSPSARYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTA 373
Query: 297 AGVWLDRNGLVTSSRTSKGHGEH---DPSLELMRRCRHASASIGVRIYIYGGLKGDILLD 353
AGVW D +VTS RT + + D S+EL RRCRHA+A++G I+IYGGL+G +LLD
Sbjct: 374 AGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAAAAVGDLIFIYGGLRGGVLLD 433
Query: 354 DFLVAEN-------------SPFQSDVNSPLLTSERAPTHTGSKVNQTNLGYVTTPTPDG 400
D LVAE+ + + N+P R+P G +T G + PD
Sbjct: 434 DLLVAEDLAAAETTSAASHAAAAAAATNTP---PGRSPGRYGFSDERT--GELPESAPDA 488
Query: 401 ------LHSPSFGSLSMD---KNSM-----------EKLREASAAEAEAANAVWQAAQAA 440
+ P G + D +N+M E L EASAAEAEA +A AA+A
Sbjct: 489 VVLGSPVAPPVNGDMYTDISTENAMVPGIRRTSKGVEYLVEASAAEAEAISATLAAAKAR 548
Query: 441 SAVPPEETSVSDDNSQVAEATSDG---------------SDTEADVRLHPRAVVVAKEAV 485
E D + AEAT G S A VRLH RAVVVA E
Sbjct: 549 QVNGEVELP---DRDRGAEATPSGKPSLSLIKPDSAVPNSVIPAGVRLHHRAVVVAAETG 605
Query: 486 GNLGGMVRQLSLDQFENESRRMIPLNNELSYPTKK-FTRQRSPQGLHKKIISTLLRPRNW 544
G LGGMVRQLS+DQFENE RR+ E + +K RQ S + KK+++ LL+PR W
Sbjct: 606 GALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVVAHLLKPRGW 665
Query: 545 KAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYG 604
K P R+FFLD E+ +LC +AE+IF EPTVLQL+AP+K+FGDLHGQFGDLMRLFDEYG
Sbjct: 666 KPPVRRQFFLDCNEIADLCDSAERIFSSEPTVLQLKAPIKIFGDLHGQFGDLMRLFDEYG 725
Query: 605 FPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALF 664
PSTAGDI+YIDYLFLGDYVDRGQHSLETITLLLALK+EY NVHLIRGNHEAADINALF
Sbjct: 726 SPSTAGDISYIDYLFLGDYVDRGQHSLETITLLLALKVEYQHNVHLIRGNHEAADINALF 785
Query: 665 GFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLE 724
GFR+ECIERMGE DGIW W R N+LFN LPLAALIEKKIICMHGGIGRSI+ VEQIE ++
Sbjct: 786 GFRIECIERMGERDGIWVWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENIQ 845
Query: 725 RPITMDAGSIILMDLLW 741
RPITM+AGSI+LMDLLW
Sbjct: 846 RPITMEAGSIVLMDLLW 862
|
Phosphatase involved in elongation process, probably by acting as a regulator of brassinolide signaling. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|Q9SJF0|BSL2_ARATH Serine/threonine-protein phosphatase BSL2 OS=Arabidopsis thaliana GN=BSL2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/789 (58%), Positives = 544/789 (68%), Gaps = 57/789 (7%)
Query: 10 APSYRTLETYWDTDEDAPGPRCGHTLTAVAATKT------TGPRLILFGGATAIEGGA-- 61
AP+Y ++ D ED PGPRCGHTLTAV A GPRL+LFGGATA+EG +
Sbjct: 85 APTYSVVDAMMDKKEDGPGPRCGHTLTAVPAVGDEGTPGYIGPRLVLFGGATALEGNSGG 144
Query: 62 -----TSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQG 116
++ + GIRLAG T VH YDVL+ KWTR+ P GEPP+PRAAH A AVGTMVV QG
Sbjct: 145 TGTPTSAGSAGIRLAGATADVHCYDVLSNKWTRLTPFGEPPTPRAAHVATAVGTMVVIQG 204
Query: 117 GIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKR 176
GIGPAG S +DL+VLDLT + +WHRVVVQG GPGPRYGHVM LV QRYL+++ GNDGKR
Sbjct: 205 GIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKR 264
Query: 177 VLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAY 236
L+D WALDTA KPY W++L PEG+ P MYATASARSDG+ LLCGGRDA+ PLA AY
Sbjct: 265 PLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAY 324
Query: 237 GLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTA 296
GL HR+G+WEW +APGV+PS RYQHAAVFV ARLHV+GGAL GGR +E ++VAVLDTA
Sbjct: 325 GLAKHRDGRWEWAIAPGVSPSSRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTA 384
Query: 297 AGVWLDRNGLVTSSRTSKGHGEH---DPSLELMRRCRHASASIGVRIYIYGGLKGDILLD 353
AGVW D +VTS RT + + D S+EL RRCRHA+A++G I+IYGGL+G +LLD
Sbjct: 385 AGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAAAAVGDLIFIYGGLRGGVLLD 444
Query: 354 ------DFLVAENS------PFQSDVNSPL--------LTSERAPTHTGSKVN-QTNLGY 392
D AE + + NSP + ER + S + LG
Sbjct: 445 DLLVAEDLAAAETTYAASHAAAAAATNSPPGRLPGRYGFSDERNRELSESAADGAVVLGS 504
Query: 393 VTTPTPDG-LH---SPSFGSLSMDKNSMEKLREASAAEAEAANAVWQAAQAASAVPPEET 448
P +G +H SP L + + + + A A A A+ AA A
Sbjct: 505 PVAPPVNGDMHTDISPENALLPGTRRTNKGVEYLVEASAAEAEAISATLAAAKARQVNGE 564
Query: 449 SVSDDNSQVAEATSDG---------------SDTEADVRLHPRAVVVAKEAVGNLGGMVR 493
D AEAT G S T A +RLH RAVVVA E G LGGMVR
Sbjct: 565 VELPDRDCGAEATPSGKPTFSLIKPDSMGSMSVTPAGIRLHHRAVVVAAETGGALGGMVR 624
Query: 494 QLSLDQFENESRRMIPLNNELSYPTKKF-TRQRSPQGLHKKIISTLLRPRNWKAPANRRF 552
QLS+DQFENE RR+ E + +K RQ S + KK+I+ LL+PR WK P R+F
Sbjct: 625 QLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQF 684
Query: 553 FLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDI 612
FLD E+ +LC +AE+IF EPTVLQL+AP+K+FGDLHGQFGDLMRLFDEYG PSTAGDI
Sbjct: 685 FLDCNEIADLCDSAERIFASEPTVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDI 744
Query: 613 TYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIE 672
+YIDYLFLGDYVDRGQHSLETI+LLLALK+EY NVHLIRGNHEAADINALFGFR+ECIE
Sbjct: 745 SYIDYLFLGDYVDRGQHSLETISLLLALKVEYQHNVHLIRGNHEAADINALFGFRIECIE 804
Query: 673 RMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAG 732
RMGE DGIW W R N+LFN LPLAA IEKKIICMHGGIGRSI+ VEQIE ++RPITM+AG
Sbjct: 805 RMGERDGIWVWHRINRLFNWLPLAASIEKKIICMHGGIGRSINHVEQIENIQRPITMEAG 864
Query: 733 SIILMDLLW 741
SI+LMDLLW
Sbjct: 865 SIVLMDLLW 873
|
Phosphatase involved in elongation process, probably by acting as a regulator of brassinolide signaling. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|Q9LR78|BSU1_ARATH Serine/threonine-protein phosphatase BSU1 OS=Arabidopsis thaliana GN=BSU1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 704 bits (1817), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/738 (50%), Positives = 482/738 (65%), Gaps = 80/738 (10%)
Query: 4 KPWLHPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATS 63
+ + +P+PSY +++T++DTDED PGPRCGHTLTAV + +LILFGG+T S
Sbjct: 5 QSYQYPSPSYESIQTFYDTDEDWPGPRCGHTLTAVFVNNSH--QLILFGGSTTAVANHNS 62
Query: 64 SAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGH 123
S P I L GVTNSVH +DVLTRKWTR+ P G+ PSPRA HAAA GT+++ QGGIGP+G
Sbjct: 63 SLPEISLDGVTNSVHSFDVLTRKWTRLNPIGDVPSPRACHAAALYGTLILIQGGIGPSGP 122
Query: 124 STDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWA 183
S D+Y+LD+TN+ KW + +V G+ P PRYGHVMD+ +QR+LV SGN+G +L D WA
Sbjct: 123 SDGDVYMLDMTNN--KWIKFLVGGETPSPRYGHVMDIAAQRWLVIFSGNNGNEILDDTWA 180
Query: 184 LDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRN 243
LDT + P+ W RLNP G++PS RMYA+ S+R DG+FLLCGG D SG L D YGL M +
Sbjct: 181 LDT-RGPFSWDRLNPSGNQPSGRMYASGSSREDGIFLLCGGIDHSGVTLGDTYGLKMDSD 239
Query: 244 GQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDR 303
WT P VAPSPRYQH AVF G++LHV GG L R I+GEA VAVLDT G W+D
Sbjct: 240 NV--WTPVPAVAPSPRYQHTAVFGGSKLHVIGGILNRARLIDGEAVVAVLDTETGEWVDT 297
Query: 304 NGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLDDFLVAENSPF 363
N TS+ + ++ +LMRRC HA+AS G +Y++GG++ D+LLDD LVAE S
Sbjct: 298 NQPETSASGANRQNQY----QLMRRCHHAAASFGSHLYVHGGIREDVLLDDLLVAETS-- 351
Query: 364 QSDVNSPLLTSERAPTHTGSKVNQTNLGYVTTPTPDGLHSPSFGSLSMDKNSMEKLREAS 423
QS ++P P+ + ++ + +D M++ + S
Sbjct: 352 QS----------------------------SSPEPEEDNPDNY--MLLDDYLMDEPKPLS 381
Query: 424 AAEAEAANAVWQAAQAASAVPPEETSVSDDNSQVAEATSDGSDTEADVRLHPRAVVVAKE 483
+E EA++ + ++ S + + + + + + A D S E V L A E
Sbjct: 382 -SEPEASSFI---MRSTSEIAMDRLAEAHNLPTIENAFYD-SAIEGYVPLQHGA-----E 431
Query: 484 AVGNLGGMVRQLSLDQFENESRRMIPLNNELSYPTKKFTRQRSPQGLHKKIISTLLRPRN 543
VGN GG+VR SLDQ S Q LHKK+ISTLLRP+
Sbjct: 432 TVGNRGGLVRTASLDQ--------------------------STQDLHKKVISTLLRPKT 465
Query: 544 WKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEY 603
W PANR FFL EV LC E+IFM EPT+LQL+ P+KVFGD+HGQ+GDLMRLF EY
Sbjct: 466 WTPPANRDFFLSYLEVKHLCDEVEKIFMNEPTLLQLKVPIKVFGDIHGQYGDLMRLFHEY 525
Query: 604 GFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINAL 663
G PS GDIT+IDYLFLGDYVDRGQHSLE I LL ALKIEYP+N+HLIRGNHE+ +N +
Sbjct: 526 GHPSVEGDITHIDYLFLGDYVDRGQHSLEIIMLLFALKIEYPKNIHLIRGNHESLAMNRI 585
Query: 664 FGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKL 723
+GF EC ERMGE+ G AW + NQ+F+ LPLAAL+EKK++C+HGGIGR++ ++E+IE +
Sbjct: 586 YGFLTECEERMGESYGFEAWLKINQVFDYLPLAALLEKKVLCVHGGIGRAV-TIEEIENI 644
Query: 724 ERPITMDAGSIILMDLLW 741
ERP D GS++L D+LW
Sbjct: 645 ERPAFPDTGSMVLKDILW 662
|
Phosphatase that acts as a positive regulator of brassinolide signaling. Dephosphorylates BES1, a transcription factor that regulates the expression of brassinolide-response genes, thereby playing an important role in the regulation of response to brassinosteroids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|Q2QM47|BSL2_ORYSJ Serine/threonine-protein phosphatase BSL2 homolog OS=Oryza sativa subsp. japonica GN=BSL2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 473 bits (1217), Expect = e-132, Method: Compositional matrix adjust.
Identities = 232/366 (63%), Positives = 276/366 (75%), Gaps = 14/366 (3%)
Query: 9 PAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKT------TGPRLILFGGATAIEGGA- 61
PAP Y + + ED PG RCGHTLTAV A GPRLILFGGATA+EG +
Sbjct: 73 PAPGYTVVNAAMEKKEDGPGCRCGHTLTAVPAVGEEGAPGYVGPRLILFGGATALEGNSA 132
Query: 62 ----TSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGG 117
++ + GIRLAG T VH YDV + KW+R+ P GEPPSPRAAH A AVGTMVV QGG
Sbjct: 133 TPPSSAGSAGIRLAGATADVHCYDVSSNKWSRLTPVGEPPSPRAAHVATAVGTMVVIQGG 192
Query: 118 IGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRV 177
IGPAG S +DL+VLDLT + +WHRVVVQG GPGPRYGHVM LV QR+L+++ GNDGKR
Sbjct: 193 IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRFLLTIGGNDGKRP 252
Query: 178 LSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYG 237
L+D WALDTA KPY W++L PEG+ P MYATASARSDG+ LLCGGRDA+ PLA AYG
Sbjct: 253 LADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAYG 312
Query: 238 LLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAA 297
L HR+G+WEW +APGV+PSPRYQHAAVFV ARLHV+GGAL GGR +E ++VAVLDTAA
Sbjct: 313 LAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAA 372
Query: 298 GVWLDRNGLVTSSRTSKGHGEH---DPSLELMRRCRHASASIGVRIYIYGGLKGDILLDD 354
GVW D +VT+ RT + + D S+EL RRCRHA+A++G IY+YGGL+G +LLDD
Sbjct: 373 GVWCDTKSVVTTPRTGRYSADAAGGDASVELTRRCRHAAAAVGDMIYVYGGLRGGVLLDD 432
Query: 355 FLVAEN 360
LVAE+
Sbjct: 433 LLVAED 438
|
Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|P48485|PP15_ARATH Serine/threonine-protein phosphatase PP1 isozyme 5 OS=Arabidopsis thaliana GN=TOPP5 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 212 bits (540), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 109/209 (52%), Positives = 143/209 (68%), Gaps = 14/209 (6%)
Query: 534 IISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQF 593
II LL RN KA + DS E+ +LC+ + +IF+Q+P +L+L APVK+ GD+HGQ+
Sbjct: 17 IIRRLLDYRNPKAGTKQAMLNDS-EIRQLCFVSREIFLQQPCLLELAAPVKICGDIHGQY 75
Query: 594 GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRG 653
DL+RLF+ GFP A +YLFLGDYVDRG+ SLETI LLLA KI+YPEN L+RG
Sbjct: 76 SDLLRLFEYGGFPPAA------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 129
Query: 654 NHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRS 713
NHE A IN ++GF EC R + W F FNCLP+AA+I++KI+CMHGG+
Sbjct: 130 NHECASINRIYGFYDECKRRF----NVKLWKVFTDTFNCLPVAAVIDEKILCMHGGLSPE 185
Query: 714 IHSVEQIEKLERPITM-DAGSIILMDLLW 741
+ +VEQI+ +ERP + DAG +L DLLW
Sbjct: 186 LINVEQIKNIERPTDVPDAG--LLCDLLW 212
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|P48482|PP12_ARATH Serine/threonine-protein phosphatase PP1 isozyme 2 OS=Arabidopsis thaliana GN=TOPP2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 211 bits (536), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 106/209 (50%), Positives = 143/209 (68%), Gaps = 14/209 (6%)
Query: 534 IISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQF 593
II LL RN K P ++ L+ E+ +LC + +IF+Q+P +L+L AP+K+ GD+HGQ+
Sbjct: 17 IIRRLLDYRNPK-PGTKQAMLNESEIRQLCIVSREIFLQQPNLLELEAPIKICGDIHGQY 75
Query: 594 GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRG 653
DL+RLF+ GFP TA +YLFLGDYVDRG+ SLETI LLLA KI+YPEN L+RG
Sbjct: 76 SDLLRLFEYGGFPPTA------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 129
Query: 654 NHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRS 713
NHE A IN ++GF EC R + W F FNCLP+AA+I+ KI+CMHGG+
Sbjct: 130 NHECASINRIYGFYDECKRRF----SVRLWKVFTDSFNCLPVAAVIDDKILCMHGGLSPD 185
Query: 714 IHSVEQIEKLERPITM-DAGSIILMDLLW 741
+ +VEQI+ ++RP + D+G +L DLLW
Sbjct: 186 LTNVEQIKNIKRPTDVPDSG--LLCDLLW 212
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|P22198|PP1_MAIZE Serine/threonine-protein phosphatase PP1 OS=Zea mays GN=PP1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 207 bits (528), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/214 (48%), Positives = 141/214 (65%), Gaps = 15/214 (7%)
Query: 529 GLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGD 588
L +I LL +N K N + L E+ +LC AA++IF+Q+P +L+L AP+K+ GD
Sbjct: 4 ALLDDVIRRLLEVKNLKPGKNAQ--LSESEIKQLCAAAKEIFLQQPNLLELEAPIKICGD 61
Query: 589 LHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENV 648
+HGQ+ DL+RLFD G+P A +YLFLGDYVDRG+ SLETI LLLA K++YPEN
Sbjct: 62 VHGQYSDLLRLFDYGGYPPQA------NYLFLGDYVDRGKQSLETICLLLAYKVKYPENF 115
Query: 649 HLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHG 708
L+RGNHE A +N ++GF EC R + W F FNCLP++ALI++KI+CMHG
Sbjct: 116 FLLRGNHECASVNRIYGFYDECKRRF----SVKLWKTFTDCFNCLPVSALIDEKILCMHG 171
Query: 709 GIGRSIHSVEQIEKLERPITM-DAGSIILMDLLW 741
G+ ++ +EQI L RP + D G +L DLLW
Sbjct: 172 GLSPELNKLEQILNLNRPTDVPDTG--LLCDLLW 203
|
Zea mays (taxid: 4577) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
| >sp|O04856|PP11_TOBAC Serine/threonine-protein phosphatase PP1 isozyme 1 OS=Nicotiana tabacum GN=NPP1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 206 bits (524), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 107/214 (50%), Positives = 143/214 (66%), Gaps = 15/214 (7%)
Query: 529 GLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGD 588
G+ II+ LL RN A R+ L E+ LC A+ +IF+Q+P +L L+ P+K+ GD
Sbjct: 18 GVLDDIINRLLEFRN--ARTVRQVQLSEAEIRSLCSASREIFLQQPNLLDLKPPIKICGD 75
Query: 589 LHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENV 648
+HGQ+GDL+RLF+ GFP A +YLFLGDYVDRG+ SLETI LLLA KI+YPEN
Sbjct: 76 IHGQYGDLLRLFEYGGFPPEA------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENF 129
Query: 649 HLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHG 708
L+RGNHE A IN ++GF EC R + W F + FNCLP+AALI++KI+CMHG
Sbjct: 130 FLLRGNHECASINRIYGFYDECKRRF----NVKLWKCFTECFNCLPVAALIDEKILCMHG 185
Query: 709 GIGRSIHSVEQIEKLERPITM-DAGSIILMDLLW 741
G+ + +++QI L RP + D+G +L DLLW
Sbjct: 186 GLSPVLTNLDQIRNLPRPTDVPDSG--LLCDLLW 217
|
Nicotiana tabacum (taxid: 4097) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 769 | ||||||
| 359479775 | 888 | PREDICTED: serine/threonine-protein phos | 0.960 | 0.832 | 0.908 | 0.0 | |
| 427199335 | 887 | kelch repeat-containing serine/threonine | 0.963 | 0.835 | 0.899 | 0.0 | |
| 224131276 | 892 | predicted protein [Populus trichocarpa] | 0.962 | 0.829 | 0.885 | 0.0 | |
| 255559380 | 885 | bsu-protein phosphatase, putative [Ricin | 0.963 | 0.837 | 0.882 | 0.0 | |
| 356500242 | 881 | PREDICTED: serine/threonine-protein phos | 0.955 | 0.834 | 0.877 | 0.0 | |
| 356535611 | 881 | PREDICTED: serine/threonine-protein phos | 0.955 | 0.834 | 0.874 | 0.0 | |
| 224064780 | 890 | predicted protein [Populus trichocarpa] | 0.962 | 0.831 | 0.875 | 0.0 | |
| 449444661 | 905 | PREDICTED: LOW QUALITY PROTEIN: serine/t | 0.958 | 0.814 | 0.858 | 0.0 | |
| 341657648 | 888 | serine/threonine-protein phosphatase [Ca | 0.960 | 0.832 | 0.856 | 0.0 | |
| 395133374 | 878 | Ser/Thr phosphatase-containing Kelch rep | 0.950 | 0.832 | 0.860 | 0.0 |
| >gi|359479775|ref|XP_002270638.2| PREDICTED: serine/threonine-protein phosphatase BSL1-like [Vitis vinifera] gi|296086652|emb|CBI32287.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1361 bits (3523), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 673/741 (90%), Positives = 710/741 (95%), Gaps = 2/741 (0%)
Query: 3 AKPWLHPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGAT 62
+KPWL+PAP+YRTLE+YWDTD+DAPGPRCGHTLTA+A TKT GPRLILFGGATAIEGGA+
Sbjct: 4 SKPWLYPAPTYRTLESYWDTDDDAPGPRCGHTLTAIAPTKTHGPRLILFGGATAIEGGAS 63
Query: 63 SSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAG 122
SSAPGIRLAGVTNSVH YDVLTRKWTR+RPAGEPPS RAAHAAAAVGTMVVFQGGIGPAG
Sbjct: 64 SSAPGIRLAGVTNSVHSYDVLTRKWTRLRPAGEPPSVRAAHAAAAVGTMVVFQGGIGPAG 123
Query: 123 HSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAW 182
HSTDDLYVLDLTNDK+KWHRVVVQGQGPGPRYGHV+DLV+QRYLV+VSGNDGKRVLSDAW
Sbjct: 124 HSTDDLYVLDLTNDKYKWHRVVVQGQGPGPRYGHVIDLVAQRYLVTVSGNDGKRVLSDAW 183
Query: 183 ALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHR 242
ALDTAQKPY WQRLNPEGDRPSARMYATASARSDGMFLLCGGRD+SGAPLADAYGLLMHR
Sbjct: 184 ALDTAQKPYAWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDSSGAPLADAYGLLMHR 243
Query: 243 NGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLD 302
NGQWEWTLAPGV+PSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLD
Sbjct: 244 NGQWEWTLAPGVSPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLD 303
Query: 303 RNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLDDFLVAENSP 362
RNGLVTS R +KGH E+DPSLELMRRCRHA+AS+GVRIYIYGGLKGD+LLDDFL+AENS
Sbjct: 304 RNGLVTSPRINKGHTEYDPSLELMRRCRHAAASVGVRIYIYGGLKGDMLLDDFLIAENSA 363
Query: 363 FQSDVNSPLLTSERAPTHTGSKVNQTNLG-YVTTPTPDG-LHSPSFGSLSMDKNSMEKLR 420
FQSD+NSP+LTS+RA T T K+NQ+N Y TTPTPDG L PS G+ SMDK+SMEKL
Sbjct: 364 FQSDINSPILTSDRAATITSPKLNQSNANLYGTTPTPDGRLEVPSSGAASMDKSSMEKLA 423
Query: 421 EASAAEAEAANAVWQAAQAASAVPPEETSVSDDNSQVAEATSDGSDTEADVRLHPRAVVV 480
EASAAEAEA +AVWQA QAASAVP +ETSVSDDNSQ AE TSDGSDTEADVRLHPRAVVV
Sbjct: 424 EASAAEAEAVSAVWQAMQAASAVPSDETSVSDDNSQAAETTSDGSDTEADVRLHPRAVVV 483
Query: 481 AKEAVGNLGGMVRQLSLDQFENESRRMIPLNNELSYPTKKFTRQRSPQGLHKKIISTLLR 540
AKEAVGNLGGMVRQLSLDQFENESRRM+P+NN+LSYPT+KFTRQ+SPQGLHKKIISTLLR
Sbjct: 484 AKEAVGNLGGMVRQLSLDQFENESRRMVPMNNDLSYPTRKFTRQKSPQGLHKKIISTLLR 543
Query: 541 PRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLF 600
PRNWKAPANRRFFLDSYEVGELCYAAEQIFM EPTVLQL+AP+KVFGDLHGQFGDLMRLF
Sbjct: 544 PRNWKAPANRRFFLDSYEVGELCYAAEQIFMHEPTVLQLKAPIKVFGDLHGQFGDLMRLF 603
Query: 601 DEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADI 660
DEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADI
Sbjct: 604 DEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADI 663
Query: 661 NALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQI 720
NALFGFRLECIERMGE+DGIWAWTRFNQLFN LPLAALIEKKIICMHGGIGRSI SVEQI
Sbjct: 664 NALFGFRLECIERMGESDGIWAWTRFNQLFNFLPLAALIEKKIICMHGGIGRSISSVEQI 723
Query: 721 EKLERPITMDAGSIILMDLLW 741
EKLERPITMDAGSIILMDLLW
Sbjct: 724 EKLERPITMDAGSIILMDLLW 744
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|427199335|gb|AFY26889.1| kelch repeat-containing serine/threonine phosphoesterase family protein [Morella rubra] | Back alignment and taxonomy information |
|---|
Score = 1333 bits (3450), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 668/743 (89%), Positives = 702/743 (94%), Gaps = 2/743 (0%)
Query: 1 MNAKPWLHPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGG 60
M +KPWL PAP+YRTLETYWDTDEDAPGPRCGHTLTAVAATK+ G RLILFGGATAIEGG
Sbjct: 1 MGSKPWLSPAPTYRTLETYWDTDEDAPGPRCGHTLTAVAATKSHGARLILFGGATAIEGG 60
Query: 61 ATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGP 120
A+SSAPGIRLAGVTNSVH YDVLTRKWTRIRPAG+PPS RAAHAAAAVGTMVVFQGGIGP
Sbjct: 61 ASSSAPGIRLAGVTNSVHSYDVLTRKWTRIRPAGDPPSLRAAHAAAAVGTMVVFQGGIGP 120
Query: 121 AGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSD 180
AGHSTDDLYVLDLTNDK+KWHRVVVQGQGPGPRYGHVMDLV+QRYLV+VSGNDGKRVLSD
Sbjct: 121 AGHSTDDLYVLDLTNDKYKWHRVVVQGQGPGPRYGHVMDLVAQRYLVTVSGNDGKRVLSD 180
Query: 181 AWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLM 240
AW LDTAQKPYVWQRLNPEGDRP ARMYATASARSDGMFLLCGGRD+SG PLADAYGLLM
Sbjct: 181 AWVLDTAQKPYVWQRLNPEGDRPCARMYATASARSDGMFLLCGGRDSSGTPLADAYGLLM 240
Query: 241 HRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVW 300
HRNGQWEWTLAPGV+PSPRYQHAAVFVGARLHVTGG LRGGRA+EGE+A+AVLDTAAGVW
Sbjct: 241 HRNGQWEWTLAPGVSPSPRYQHAAVFVGARLHVTGGVLRGGRAVEGESAIAVLDTAAGVW 300
Query: 301 LDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLDDFLVAEN 360
LDRNGLVTSSRTSKG E+DPSLELMRRCRHA+AS+GVRIY+YGGL+GDILLDDFLVAEN
Sbjct: 301 LDRNGLVTSSRTSKGQTEYDPSLELMRRCRHAAASVGVRIYVYGGLRGDILLDDFLVAEN 360
Query: 361 SPFQSDVNSPLLTSERAPTHTGSKVNQTNLG-YVTTPTPDG-LHSPSFGSLSMDKNSMEK 418
SP+Q +++SP++T ERAP+ T +K N +N+ YVT P DG S G + MDKNSMEK
Sbjct: 361 SPYQPEMSSPVMTPERAPSITNTKANHSNVNPYVTVPALDGSAESLLSGGMGMDKNSMEK 420
Query: 419 LREASAAEAEAANAVWQAAQAASAVPPEETSVSDDNSQVAEATSDGSDTEADVRLHPRAV 478
LREASAAEAEAA+AVWQA QAASA P E TSVSDD SQ AE TSDGSDTEADVRLHPRAV
Sbjct: 421 LREASAAEAEAASAVWQAVQAASAAPAEVTSVSDDRSQAAETTSDGSDTEADVRLHPRAV 480
Query: 479 VVAKEAVGNLGGMVRQLSLDQFENESRRMIPLNNELSYPTKKFTRQRSPQGLHKKIISTL 538
VVAKEAVGNLGGMVRQLSLDQFENESRRMIPLNNELSYPTKKFTRQRSPQGLHKKIISTL
Sbjct: 481 VVAKEAVGNLGGMVRQLSLDQFENESRRMIPLNNELSYPTKKFTRQRSPQGLHKKIISTL 540
Query: 539 LRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMR 598
LRPRNWKAPANRRFFLDSYEVGELCYAAEQIFM EPTVLQL+AP+KVFGDLHGQFGDLMR
Sbjct: 541 LRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMHEPTVLQLKAPIKVFGDLHGQFGDLMR 600
Query: 599 LFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAA 658
LFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIE PENVHLIRGNHEAA
Sbjct: 601 LFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIENPENVHLIRGNHEAA 660
Query: 659 DINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSVE 718
DINALFGFRLECIERMGENDGIWAWTRFNQLFN LPLAALIEKKIICMHGGIGRSI+SVE
Sbjct: 661 DINALFGFRLECIERMGENDGIWAWTRFNQLFNYLPLAALIEKKIICMHGGIGRSINSVE 720
Query: 719 QIEKLERPITMDAGSIILMDLLW 741
QIEKLERPITMDAGSI+LMDLLW
Sbjct: 721 QIEKLERPITMDAGSIVLMDLLW 743
|
Source: Morella rubra Species: Morella rubra Genus: Morella Family: Myricaceae Order: Fagales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224131276|ref|XP_002321044.1| predicted protein [Populus trichocarpa] gi|222861817|gb|EEE99359.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1333 bits (3449), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 663/749 (88%), Positives = 697/749 (93%), Gaps = 9/749 (1%)
Query: 1 MNAKPWLHPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGG 60
M +KPWLHPAP+YRTLETYWD+D+DAPG RC HTLTAVAATK+ GPRLILFGGATAIEGG
Sbjct: 1 MGSKPWLHPAPTYRTLETYWDSDDDAPGSRCAHTLTAVAATKSQGPRLILFGGATAIEGG 60
Query: 61 ATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGP 120
A SSAPGIRLAGVTNSVH YDVLTRKWTR++PAGEPPSPRAAHAAAAVGTMVVFQGGIGP
Sbjct: 61 A-SSAPGIRLAGVTNSVHSYDVLTRKWTRVQPAGEPPSPRAAHAAAAVGTMVVFQGGIGP 119
Query: 121 AGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSD 180
AGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGH MDLV+QRYLV+VSGNDGKRVLSD
Sbjct: 120 AGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHAMDLVAQRYLVTVSGNDGKRVLSD 179
Query: 181 AWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLM 240
AWALDTAQKPYVWQRLNPEGDRPSAR+YATASARSDGMFLLCGGRD+SG PL DAYGLLM
Sbjct: 180 AWALDTAQKPYVWQRLNPEGDRPSARVYATASARSDGMFLLCGGRDSSGTPLGDAYGLLM 239
Query: 241 HRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVA-------VL 293
HRNGQWEWTLAPGV+PS RYQHAAVFVGARLHVTGG+L+GGR +EGEAAVA +L
Sbjct: 240 HRNGQWEWTLAPGVSPSSRYQHAAVFVGARLHVTGGSLKGGRLVEGEAAVAGKFFFLNLL 299
Query: 294 DTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLD 353
DTAAG WLDRNGLVTSS+TSKGH E+DPS ELMRRCRHASAS+GVRIY+YGGLKGD +LD
Sbjct: 300 DTAAGAWLDRNGLVTSSKTSKGHAEYDPSFELMRRCRHASASVGVRIYVYGGLKGDAVLD 359
Query: 354 DFLVAENSPFQSDVNSPLLTSERAPTHTGSKVNQTNLGYVTTPTPDG-LHSPSFGSLSMD 412
DFLVAENSPFQ D+NSP LTSERA T T ++N +NL T TPDG P G +SMD
Sbjct: 360 DFLVAENSPFQPDINSPTLTSERASTITSPRLNHSNLNSFGTSTPDGGPEIPLSGGISMD 419
Query: 413 KNSMEKLREASAAEAEAANAVWQAAQAASAVPPEETSVSDDNSQVAEATSDGSDTEADVR 472
+NSMEKLREASAAEAEAANAVWQAAQAAS EETSVSDDNSQ AEATSDGSD EADVR
Sbjct: 420 RNSMEKLREASAAEAEAANAVWQAAQAASTNSAEETSVSDDNSQAAEATSDGSDNEADVR 479
Query: 473 LHPRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMIPLNNELSYPTKKFTRQRSPQGLHK 532
LHPRAVVVAKE VGNLGGMVRQLSLDQFENESRRM+P+NN+ S P KKFTRQRSPQGLHK
Sbjct: 480 LHPRAVVVAKETVGNLGGMVRQLSLDQFENESRRMVPMNNDASNPAKKFTRQRSPQGLHK 539
Query: 533 KIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQ 592
KIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAP+KVFGDLHGQ
Sbjct: 540 KIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPIKVFGDLHGQ 599
Query: 593 FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIR 652
FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLET+TLLLALKIEYPENVHLIR
Sbjct: 600 FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETMTLLLALKIEYPENVHLIR 659
Query: 653 GNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGR 712
GNHEAADINALFGFR+ECIERMGE+DGIWAWTRFNQLFN LPLAALIEKKIICMHGGIGR
Sbjct: 660 GNHEAADINALFGFRIECIERMGESDGIWAWTRFNQLFNYLPLAALIEKKIICMHGGIGR 719
Query: 713 SIHSVEQIEKLERPITMDAGSIILMDLLW 741
SIHSVEQIEKLERPITMDAGSIILMDLLW
Sbjct: 720 SIHSVEQIEKLERPITMDAGSIILMDLLW 748
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255559380|ref|XP_002520710.1| bsu-protein phosphatase, putative [Ricinus communis] gi|223540095|gb|EEF41672.1| bsu-protein phosphatase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1327 bits (3433), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 654/741 (88%), Positives = 692/741 (93%)
Query: 1 MNAKPWLHPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGG 60
M +KPWLHPAP+YR LETYWDTDEDAPGPRCGHTLTAVAAT T GPRLILFGGATAIEGG
Sbjct: 1 MGSKPWLHPAPTYRPLETYWDTDEDAPGPRCGHTLTAVAATNTHGPRLILFGGATAIEGG 60
Query: 61 ATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGP 120
+SSAPGIRLAGVTNSVH YDVLTRKWTR+RPAGEPPSPRAAHAAAAVGTMVVFQGGIGP
Sbjct: 61 GSSSAPGIRLAGVTNSVHSYDVLTRKWTRMRPAGEPPSPRAAHAAAAVGTMVVFQGGIGP 120
Query: 121 AGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSD 180
AGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLV+QR+LV+VSGNDGKRVLSD
Sbjct: 121 AGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVAQRFLVTVSGNDGKRVLSD 180
Query: 181 AWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLM 240
AWALDTAQKPY WQRLNPEGDRP+ARMYATASARSDGMFLLCGGRD+SG L DAYGLLM
Sbjct: 181 AWALDTAQKPYAWQRLNPEGDRPTARMYATASARSDGMFLLCGGRDSSGMALGDAYGLLM 240
Query: 241 HRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVW 300
HRNGQWEWTLAPGV+PS RYQHAAVFVGARLHVTGG L+GGR++E EAAVAVLDTAAGVW
Sbjct: 241 HRNGQWEWTLAPGVSPSQRYQHAAVFVGARLHVTGGVLKGGRSVESEAAVAVLDTAAGVW 300
Query: 301 LDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLDDFLVAEN 360
LD+NGLVTS +TSKGH E+D SLE MRRCRHA+AS+GVRIY+YGGL+GD+LLDDFLVAEN
Sbjct: 301 LDKNGLVTSPKTSKGHVEYDSSLEQMRRCRHAAASVGVRIYVYGGLRGDVLLDDFLVAEN 360
Query: 361 SPFQSDVNSPLLTSERAPTHTGSKVNQTNLGYVTTPTPDGLHSPSFGSLSMDKNSMEKLR 420
S FQSD+NS +LTSERA T T +++N ++L T T GL PS G +SMDKNSMEKLR
Sbjct: 361 SQFQSDINSSVLTSERASTITSARINHSSLNPYDTITDGGLEFPSSGGISMDKNSMEKLR 420
Query: 421 EASAAEAEAANAVWQAAQAASAVPPEETSVSDDNSQVAEATSDGSDTEADVRLHPRAVVV 480
EASAAEAE ANAVWQAAQAAS EETS SDDNSQ AEATSDGSDTEADVRLH RAVVV
Sbjct: 421 EASAAEAEVANAVWQAAQAASTNSAEETSASDDNSQAAEATSDGSDTEADVRLHSRAVVV 480
Query: 481 AKEAVGNLGGMVRQLSLDQFENESRRMIPLNNELSYPTKKFTRQRSPQGLHKKIISTLLR 540
AKEAVG+LGG+VRQLSLDQFENESRRMIP+N + YP +KF RQ+SPQGLHKKIISTLLR
Sbjct: 481 AKEAVGSLGGLVRQLSLDQFENESRRMIPMNTDTPYPARKFARQKSPQGLHKKIISTLLR 540
Query: 541 PRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLF 600
PRNWKAPANRRFFLDSYEVGELCYAAEQIFM EPTVLQL+APVKVFGDLHGQFGDLMRLF
Sbjct: 541 PRNWKAPANRRFFLDSYEVGELCYAAEQIFMHEPTVLQLKAPVKVFGDLHGQFGDLMRLF 600
Query: 601 DEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADI 660
DEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADI
Sbjct: 601 DEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADI 660
Query: 661 NALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQI 720
NALFGFRLECIERMGE+DGIWAWTRFNQLFN LPLAALIEKKIICMHGGIGRSIHSVEQI
Sbjct: 661 NALFGFRLECIERMGESDGIWAWTRFNQLFNFLPLAALIEKKIICMHGGIGRSIHSVEQI 720
Query: 721 EKLERPITMDAGSIILMDLLW 741
EK+ERPITMDAGSIILMDLLW
Sbjct: 721 EKIERPITMDAGSIILMDLLW 741
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356500242|ref|XP_003518942.1| PREDICTED: serine/threonine-protein phosphatase BSL1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1313 bits (3399), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 652/743 (87%), Positives = 695/743 (93%), Gaps = 8/743 (1%)
Query: 1 MNAKPWLHPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGG 60
M +KPWL+PAP+YRT+ET+W TDEDAPGPRCGHTLTAVAATKT GPRLILFGGATAIEGG
Sbjct: 1 MGSKPWLYPAPTYRTIETFWVTDEDAPGPRCGHTLTAVAATKTQGPRLILFGGATAIEGG 60
Query: 61 ATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGP 120
+SSAPGIRLAGVTN+VH YDV +RKWT I+PAGEPPSPRAAHAAAAVGTMVVFQGGIGP
Sbjct: 61 -SSSAPGIRLAGVTNTVHSYDVQSRKWTSIKPAGEPPSPRAAHAAAAVGTMVVFQGGIGP 119
Query: 121 AGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSD 180
AGHSTDDLYVLDLTNDK+KWHRVVVQGQGPGPRYGHVMDLV+QRYLV+VSGNDGKRV+SD
Sbjct: 120 AGHSTDDLYVLDLTNDKYKWHRVVVQGQGPGPRYGHVMDLVAQRYLVTVSGNDGKRVVSD 179
Query: 181 AWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLM 240
AWA DTAQKPYVWQ+LNPEGDRPSARMYATASARSDGMFLLCGGRD+SGAPLADAYGLLM
Sbjct: 180 AWAFDTAQKPYVWQKLNPEGDRPSARMYATASARSDGMFLLCGGRDSSGAPLADAYGLLM 239
Query: 241 HRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVW 300
HRNGQWEWTLAPGV+PSPRYQHAAVFVGARLHVTGG LRGGR++EGEA++AVLDTAAGVW
Sbjct: 240 HRNGQWEWTLAPGVSPSPRYQHAAVFVGARLHVTGGVLRGGRSVEGEASIAVLDTAAGVW 299
Query: 301 LDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLDDFLVAEN 360
LDRNG+V+SSR++KGH ++DPSLELMRRCRHA+A++GV I+IYGGL+GDILLDDFLVAEN
Sbjct: 300 LDRNGIVSSSRSNKGH-DYDPSLELMRRCRHAAAAVGVHIFIYGGLRGDILLDDFLVAEN 358
Query: 361 SPFQSDVNSPLLTSERAPTHTGSKVNQTNLGY-VTTPTPDGLHS-PSFGSLSMDKNSMEK 418
SP Q D+NSP ERA T SK NQ+NL Y VTTP DG PS G MDKNS+EK
Sbjct: 359 SPLQPDINSP----ERASPVTSSKQNQSNLNYNVTTPNLDGGPDIPSSGGSGMDKNSLEK 414
Query: 419 LREASAAEAEAANAVWQAAQAASAVPPEETSVSDDNSQVAEATSDGSDTEADVRLHPRAV 478
LREASAAEAEAA+AVWQA QA S+ P EETSVSDDNSQ E SDGSDTE DVRLHPRAV
Sbjct: 415 LREASAAEAEAASAVWQAVQAISSNPAEETSVSDDNSQAVETVSDGSDTEGDVRLHPRAV 474
Query: 479 VVAKEAVGNLGGMVRQLSLDQFENESRRMIPLNNELSYPTKKFTRQRSPQGLHKKIISTL 538
VVAKEA+GNLGGMVRQLSLDQFENESRRMIP+NN+L YPTKKFTRQ+SPQGLHKKIISTL
Sbjct: 475 VVAKEALGNLGGMVRQLSLDQFENESRRMIPVNNDLPYPTKKFTRQKSPQGLHKKIISTL 534
Query: 539 LRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMR 598
LRPRNWKAPANRRFFLDSYEVGELCYAAEQIFM EPTVLQL+APVKVFGDLHGQFGDLMR
Sbjct: 535 LRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMHEPTVLQLKAPVKVFGDLHGQFGDLMR 594
Query: 599 LFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAA 658
LFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAA
Sbjct: 595 LFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAA 654
Query: 659 DINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSVE 718
DINALFGFR+ECIERMGENDGIWAWTRFNQLFN LPLAALIEKKIICMHGGIGRSI+SVE
Sbjct: 655 DINALFGFRIECIERMGENDGIWAWTRFNQLFNYLPLAALIEKKIICMHGGIGRSINSVE 714
Query: 719 QIEKLERPITMDAGSIILMDLLW 741
QIEKLERPITMD GSI LMDLLW
Sbjct: 715 QIEKLERPITMDTGSITLMDLLW 737
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356535611|ref|XP_003536338.1| PREDICTED: serine/threonine-protein phosphatase BSL1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1311 bits (3392), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 650/743 (87%), Positives = 697/743 (93%), Gaps = 8/743 (1%)
Query: 1 MNAKPWLHPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGG 60
M +KPWL+PAP+YRT+ET WDTDEDAPGPRCGHTLTAVAATKT GPRLILFGGATAIEGG
Sbjct: 1 MGSKPWLYPAPTYRTIETVWDTDEDAPGPRCGHTLTAVAATKTLGPRLILFGGATAIEGG 60
Query: 61 ATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGP 120
+SSAPGIRLAGVTN+VH YDV +RKWT ++PAGEPPSPRAAHAAAAVGTMVVFQGGIGP
Sbjct: 61 -SSSAPGIRLAGVTNTVHAYDVQSRKWTSVKPAGEPPSPRAAHAAAAVGTMVVFQGGIGP 119
Query: 121 AGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSD 180
AGHSTDDLYVLDLTNDK+KWHRVVVQGQGPGPRYGH MDLV+QRYLV+VSGNDGKRV+SD
Sbjct: 120 AGHSTDDLYVLDLTNDKYKWHRVVVQGQGPGPRYGHAMDLVAQRYLVTVSGNDGKRVVSD 179
Query: 181 AWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLM 240
AWALDTAQKPYVWQ+LNPEGDRPSARMYATASARSDGMFLLCGGRD+SGAPLADAYGLLM
Sbjct: 180 AWALDTAQKPYVWQKLNPEGDRPSARMYATASARSDGMFLLCGGRDSSGAPLADAYGLLM 239
Query: 241 HRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVW 300
HRNGQWEWTLAPGV+PSPRYQHAAVFVGARLHVTGG LRGGR++EGEA++AVLDTAAGVW
Sbjct: 240 HRNGQWEWTLAPGVSPSPRYQHAAVFVGARLHVTGGVLRGGRSVEGEASIAVLDTAAGVW 299
Query: 301 LDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLDDFLVAEN 360
LDRNG+V+SSR++KGH ++DP LELMRRCRHA+A++GV I+IYGGL+GDILLDDFLVAEN
Sbjct: 300 LDRNGIVSSSRSNKGH-DYDPPLELMRRCRHAAAAVGVHIFIYGGLRGDILLDDFLVAEN 358
Query: 361 SPFQSDVNSPLLTSERAPTHTGSKVNQTNLGY-VTTPTPDG-LHSPSFGSLSMDKNSMEK 418
SP Q D+NS SERA T SK NQ+NL Y VT P DG +PSFG MDKNS+EK
Sbjct: 359 SPLQPDINS----SERASPVTSSKQNQSNLTYNVTAPNLDGGPDTPSFGHSGMDKNSLEK 414
Query: 419 LREASAAEAEAANAVWQAAQAASAVPPEETSVSDDNSQVAEATSDGSDTEADVRLHPRAV 478
LREASAAEAEAA+AVWQA Q+ S+ P EETS+SD+NSQ AE SDGSDTE DVRLHPRAV
Sbjct: 415 LREASAAEAEAASAVWQAVQSISSNPAEETSLSDENSQAAETVSDGSDTEGDVRLHPRAV 474
Query: 479 VVAKEAVGNLGGMVRQLSLDQFENESRRMIPLNNELSYPTKKFTRQRSPQGLHKKIISTL 538
VVAKEAVGNLGGMVRQLSLDQFENESRRMIP+NN+L YPTKKFTRQ+SPQGLHKKIISTL
Sbjct: 475 VVAKEAVGNLGGMVRQLSLDQFENESRRMIPVNNDLPYPTKKFTRQKSPQGLHKKIISTL 534
Query: 539 LRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMR 598
LRPRNWKAPANRRFFLDSYEVGELCYAAEQIFM EPTVLQL+APVKVFGDLHGQFGDLMR
Sbjct: 535 LRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMHEPTVLQLKAPVKVFGDLHGQFGDLMR 594
Query: 599 LFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAA 658
LFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAA
Sbjct: 595 LFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAA 654
Query: 659 DINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSVE 718
DINALFGFR+ECIERMGENDGIWAWTRFNQLFN LPLAALIEKKIICMHGGIGRSI+SVE
Sbjct: 655 DINALFGFRIECIERMGENDGIWAWTRFNQLFNYLPLAALIEKKIICMHGGIGRSINSVE 714
Query: 719 QIEKLERPITMDAGSIILMDLLW 741
IEKL+RPITMDAGSIILMDLLW
Sbjct: 715 DIEKLKRPITMDAGSIILMDLLW 737
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224064780|ref|XP_002301559.1| predicted protein [Populus trichocarpa] gi|222843285|gb|EEE80832.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1305 bits (3376), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 654/747 (87%), Positives = 688/747 (92%), Gaps = 7/747 (0%)
Query: 1 MNAKPWLHPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGG 60
M +KPWLHPAP+YR LETYW +D+DAPGPRC HTLTAVAATK+ GPRLILFGG TAIEGG
Sbjct: 1 MGSKPWLHPAPAYRALETYWSSDDDAPGPRCSHTLTAVAATKSHGPRLILFGGVTAIEGG 60
Query: 61 ATSSAPGI--RLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGI 118
A SSAPGI RL G TNSVH YDVLTRKWTRI+ AGEPPSPRAAHAAAAVGTMVVFQGGI
Sbjct: 61 A-SSAPGISYRLDGATNSVHSYDVLTRKWTRIQAAGEPPSPRAAHAAAAVGTMVVFQGGI 119
Query: 119 GPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVL 178
GPAGHSTDDLYVLDL+ DKFKWHRVVVQGQGPGPRYGHVMDLV+QRYLV VSGNDGKR L
Sbjct: 120 GPAGHSTDDLYVLDLSTDKFKWHRVVVQGQGPGPRYGHVMDLVAQRYLVIVSGNDGKRAL 179
Query: 179 SDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGL 238
SDAW LDTAQKPY WQRLNPEGDRPSARMYATASARSDGMFLLCGGRD+ G L DAYGL
Sbjct: 180 SDAWVLDTAQKPYAWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDSFGTALGDAYGL 239
Query: 239 LMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAG 298
LMHRNGQWEWTLAPGV+PS RYQHAAVFVGARLHVTGGAL+GGR +EGEAAVAVLDTAAG
Sbjct: 240 LMHRNGQWEWTLAPGVSPSTRYQHAAVFVGARLHVTGGALKGGRLVEGEAAVAVLDTAAG 299
Query: 299 VWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLDDFLVA 358
VWLDRNG+VTSS+TSKGH E+DPSLELMRRCRHASAS+GVRIY+YGGLKGD +LDDFLVA
Sbjct: 300 VWLDRNGIVTSSKTSKGHAEYDPSLELMRRCRHASASVGVRIYVYGGLKGDAVLDDFLVA 359
Query: 359 ENSPFQSDVNSPLLTSERAPTHTGSKVNQTNLGYVTTPTPD-GLHSPSFGSLSMDKNSME 417
ENSPFQSD+NSP+LTSERA T T + N NL T TPD G P G +SMDKNSME
Sbjct: 360 ENSPFQSDMNSPILTSERASTITSPRSNHYNLNSFGTTTPDGGSEIPLSGGISMDKNSME 419
Query: 418 KLREASAAEAEAANAVWQAAQAASAVPPEETSVSDDNSQVAEATSDGSDTEADVRLHPRA 477
KLREASAAEAEAANAVWQAAQAAS+ P EETSVSDDNSQVAEATSDGSD EADVRLHPRA
Sbjct: 420 KLREASAAEAEAANAVWQAAQAASSNPAEETSVSDDNSQVAEATSDGSDNEADVRLHPRA 479
Query: 478 VVVAKEAVGNLGGMVRQLSLDQFENESRRMIPLNNELSYPTKKFTRQRSPQGLHKKIIST 537
VVVAKEAVGNLGG+VRQLSLDQFENESRRM+P+NN+ SYP +KFTR++SPQGLHKKIIS
Sbjct: 480 VVVAKEAVGNLGGLVRQLSLDQFENESRRMLPMNNDASYPARKFTRKKSPQGLHKKIISM 539
Query: 538 LLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLM 597
LLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQL+AP+KVFGDLHGQFGDLM
Sbjct: 540 LLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLKAPIKVFGDLHGQFGDLM 599
Query: 598 RLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETIT---LLLALKIEYPENVHLIRGN 654
RLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETIT L A IE PENVHLIRGN
Sbjct: 600 RLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKAKLIENPENVHLIRGN 659
Query: 655 HEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSI 714
HEAADINALFGFR+ECIERMGE+DGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSI
Sbjct: 660 HEAADINALFGFRIECIERMGESDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSI 719
Query: 715 HSVEQIEKLERPITMDAGSIILMDLLW 741
HSVEQIEKLERPITMDAGSIILMDLLW
Sbjct: 720 HSVEQIEKLERPITMDAGSIILMDLLW 746
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449444661|ref|XP_004140092.1| PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein phosphatase BSL1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1289 bits (3336), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 657/765 (85%), Positives = 699/765 (91%), Gaps = 28/765 (3%)
Query: 1 MNAKPWLHPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGG 60
M +KPWL+PAPSYR LETYWDTD+DAPGPRCGHTLTAVAATK+ GPRLILFGGATAIEGG
Sbjct: 1 MASKPWLYPAPSYRALETYWDTDDDAPGPRCGHTLTAVAATKSFGPRLILFGGATAIEGG 60
Query: 61 ATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGP 120
A+S+APGIRLAGVTNSVH YDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGP
Sbjct: 61 ASSAAPGIRLAGVTNSVHSYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGP 120
Query: 121 AGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSD 180
AGHSTDDL+VLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLV+QRYLVSVSGNDGKRVLSD
Sbjct: 121 AGHSTDDLFVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVAQRYLVSVSGNDGKRVLSD 180
Query: 181 AWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLM 240
AWALDTAQKPY WQRLNPEGDRPSARMYATASARSDGMFLLCGGRD++GAPLADAYGLLM
Sbjct: 181 AWALDTAQKPYAWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDSTGAPLADAYGLLM 240
Query: 241 HRNGQWEWTLAPGVAPSPR-----------YQHAA------------VFVGARLHVTGGA 277
HRNGQWEWTLAPGV+PSP H A VFVGARLHVTGG
Sbjct: 241 HRNGQWEWTLAPGVSPSPGGGGGGSFHFWCLNHVAIXSLNFAFHIIXVFVGARLHVTGGT 300
Query: 278 LRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIG 337
LRGGRAIEGEA++AVLDTAAGVWLDRNGLVTS+R +KGH ++D SLELMRRCRHA+AS+G
Sbjct: 301 LRGGRAIEGEASIAVLDTAAGVWLDRNGLVTSTRGNKGHADYDSSLELMRRCRHAAASVG 360
Query: 338 VRIYIYGGLKGDILLDDFLVAENSPFQSDVNSPLLTSERAPTHTGSKVNQTNLGYVTT-P 396
VRIYIYGGL+GD+LLDDFLVAENS FQS+++SP++TSERAP T SKVNQTN+ T P
Sbjct: 361 VRIYIYGGLRGDVLLDDFLVAENSSFQSEISSPVITSERAPIITSSKVNQTNITPSTILP 420
Query: 397 TPDGLHSPSFGSLSMDKNSMEKLREASAAEAEAANAVWQAAQAASAVPPEETSVSDDNSQ 456
+ DGL + S G SMDK+SMEKLREASAAEAEAA+AVW A QAAS E+TSVSDDNS+
Sbjct: 421 SSDGLENTSAGGTSMDKSSMEKLREASAAEAEAASAVWHAVQAASV---EDTSVSDDNSR 477
Query: 457 VAEATSDGSDTEADVRLHPRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMIPLNNELSY 516
AE TSDGSD EADVRLHPRAVVVAKEA+GNLGGMVRQLSLDQFENESRRMIP +N+LSY
Sbjct: 478 AAETTSDGSDYEADVRLHPRAVVVAKEAIGNLGGMVRQLSLDQFENESRRMIP-SNDLSY 536
Query: 517 PTKKFTRQRSPQGLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTV 576
PTKKFTRQ+SPQGLHKK+IS LLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFM E TV
Sbjct: 537 PTKKFTRQKSPQGLHKKVISILLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMHEQTV 596
Query: 577 LQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITL 636
LQL+APVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITL
Sbjct: 597 LQLKAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITL 656
Query: 637 LLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLA 696
LLALKIEYP+NVHLIRGNHEAADINALFGFRLECIERMGE+DGIWAWTRFNQLFN LPLA
Sbjct: 657 LLALKIEYPDNVHLIRGNHEAADINALFGFRLECIERMGESDGIWAWTRFNQLFNYLPLA 716
Query: 697 ALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLW 741
ALIEKKIICMHGGIGRSI +VEQIEKLERPITMDAGSIILMDLLW
Sbjct: 717 ALIEKKIICMHGGIGRSIQTVEQIEKLERPITMDAGSIILMDLLW 761
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|341657648|gb|AEK86563.1| serine/threonine-protein phosphatase [Camellia sinensis] | Back alignment and taxonomy information |
|---|
Score = 1289 bits (3335), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 639/746 (85%), Positives = 678/746 (90%), Gaps = 7/746 (0%)
Query: 1 MNAKPWLHPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGG 60
M + +PAP+YRTLETYWD+D+D+PGPRC HTLTAV+ATK+ GPRLILFGGATAIEGG
Sbjct: 1 MGSNRQFYPAPTYRTLETYWDSDDDSPGPRCSHTLTAVSATKSQGPRLILFGGATAIEGG 60
Query: 61 ATSS-APGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIG 119
A+SS APGIRLAGVTN++H YDVLTRKWTR+RPAGEPPSPRAAH A AVGTMVVFQGGIG
Sbjct: 61 ASSSSAPGIRLAGVTNAIHSYDVLTRKWTRLRPAGEPPSPRAAHTAVAVGTMVVFQGGIG 120
Query: 120 PAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLS 179
PAGHSTDDLYVLDL +DKFKWHRVVVQGQGPGPRYGHVMDLV QRYLV+VSGNDGKRVLS
Sbjct: 121 PAGHSTDDLYVLDLASDKFKWHRVVVQGQGPGPRYGHVMDLVGQRYLVTVSGNDGKRVLS 180
Query: 180 DAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLL 239
DAW LDTAQKPYVWQ LNPEGDRPSARMYATASARSDGMFLLCGGRD+SG PLADAYGLL
Sbjct: 181 DAWVLDTAQKPYVWQMLNPEGDRPSARMYATASARSDGMFLLCGGRDSSGMPLADAYGLL 240
Query: 240 MHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGV 299
MH NGQWEWTLAPGV+PSPRY+HAAVFVGARLHVTGGALRGGRA+EGEAAVAVLDTAAG
Sbjct: 241 MHMNGQWEWTLAPGVSPSPRYEHAAVFVGARLHVTGGALRGGRAVEGEAAVAVLDTAAGA 300
Query: 300 WLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLDDFLVAE 359
WLDRNGLVT+SRTSKG EHDPSLELMRRCRHA+AS+ RIYIYGGLKGDILLD+FLVAE
Sbjct: 301 WLDRNGLVTTSRTSKGPTEHDPSLELMRRCRHAAASVAERIYIYGGLKGDILLDEFLVAE 360
Query: 360 NSPFQSDVNSPLLTSERAPTHTGSKVNQTNLGYVTTPTPDGLHSP----SFGSLSMDKNS 415
NSP QSD+NSP+L+SERAPT T + N +NL PT P S G SM KNS
Sbjct: 361 NSPIQSDINSPILSSERAPTMTRPRTNHSNLSSF-DPTSLSDTRPEITSSGGMSSMRKNS 419
Query: 416 MEKLREASAAEAEAANAVWQAAQAASAVPPEETSVSDDNSQVAEATSDGSDTEADVRLHP 475
MEKL EASAAEAEAA+AVWQA QA SA PEETS+SDDNSQVAE S+ SDT+ DVRLHP
Sbjct: 420 MEKLVEASAAEAEAASAVWQAMQATSAT-PEETSMSDDNSQVAETASESSDTDPDVRLHP 478
Query: 476 RAVVVAKEAVGNLGGMVRQLSLDQFENESRRMIPLNNELSYPTKKFTRQRSPQGLHKKII 535
RAVV+AKEA GNLG MVRQLSLDQFENESRRM+P NN+ SYPTKK TRQRSPQGLHKKII
Sbjct: 479 RAVVIAKEAAGNLGLMVRQLSLDQFENESRRMVPWNNDQSYPTKKITRQRSPQGLHKKII 538
Query: 536 STLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGD 595
STLL PRNWKAPANRRFFLDSYEVGELCYA EQIFMQEPTVLQL+AP+KVFGDLHGQFGD
Sbjct: 539 STLLMPRNWKAPANRRFFLDSYEVGELCYAVEQIFMQEPTVLQLKAPIKVFGDLHGQFGD 598
Query: 596 LMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNH 655
LMRLFDEYGFPS AG ITYIDYLFLGDYVDRGQHSLETITLLLALKI+YP+NV LIRGNH
Sbjct: 599 LMRLFDEYGFPSPAGGITYIDYLFLGDYVDRGQHSLETITLLLALKIQYPDNVFLIRGNH 658
Query: 656 EAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIH 715
EAADINALFGFRLECIERMGE+DGIWAWTRFNQLFN LPLAALIEKKIICMHGGIGRSIH
Sbjct: 659 EAADINALFGFRLECIERMGESDGIWAWTRFNQLFNFLPLAALIEKKIICMHGGIGRSIH 718
Query: 716 SVEQIEKLERPITMDAGSIILMDLLW 741
SVEQIEKLERPITMD GSIILMDLLW
Sbjct: 719 SVEQIEKLERPITMDGGSIILMDLLW 744
|
Source: Camellia sinensis Species: Camellia sinensis Genus: Camellia Family: Theaceae Order: Ericales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|395133374|gb|AFN44700.1| Ser/Thr phosphatase-containing Kelch repeat domain protein [Solanum tuberosum] | Back alignment and taxonomy information |
|---|
Score = 1276 bits (3302), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 640/744 (86%), Positives = 684/744 (91%), Gaps = 13/744 (1%)
Query: 1 MNAKPWLHPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGG 60
M +KPWLHPAP+YR LET+WDTD+DAPGPRCGHTLTAVAATKT GPRLILFGGATAIEGG
Sbjct: 1 MGSKPWLHPAPTYRLLETFWDTDDDAPGPRCGHTLTAVAATKTHGPRLILFGGATAIEGG 60
Query: 61 ATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGP 120
+APGIRLAGVTN +H YDVLTRKWTR+RPAGEPPSPRAAHAAAAVGTMVVFQGGIGP
Sbjct: 61 -NGAAPGIRLAGVTNCIHSYDVLTRKWTRLRPAGEPPSPRAAHAAAAVGTMVVFQGGIGP 119
Query: 121 AGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSD 180
AGHSTDDLYVLD+TNDKFKWHRVVVQGQGPGPRYGHVMDLV+QRYLV+VSGNDGKRVLSD
Sbjct: 120 AGHSTDDLYVLDMTNDKFKWHRVVVQGQGPGPRYGHVMDLVAQRYLVTVSGNDGKRVLSD 179
Query: 181 AWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLM 240
AWALDTAQKPY WQRLNPEGDRPSARMYATASAR+DGMFLLCGGRDASG PLADAYGLLM
Sbjct: 180 AWALDTAQKPYAWQRLNPEGDRPSARMYATASARTDGMFLLCGGRDASGIPLADAYGLLM 239
Query: 241 HRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVW 300
HRNGQWEWTLAPGVAPS RYQHAAVFVGARLHVTGGALRGGR +EGEAA+AVLDTAAGVW
Sbjct: 240 HRNGQWEWTLAPGVAPSSRYQHAAVFVGARLHVTGGALRGGRGVEGEAAIAVLDTAAGVW 299
Query: 301 LDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLDDFLVAEN 360
LDR+GLVT+SR SKGH E DPSLELMRRCRHA+AS+GVRIYIYGGL+GD LLD+ LVAEN
Sbjct: 300 LDRHGLVTASRGSKGHNEQDPSLELMRRCRHAAASVGVRIYIYGGLRGDTLLDECLVAEN 359
Query: 361 SPFQSDVNSPLLTSERAPTHTGSKVNQTNLGYVTTPTPDG---LHSPSFGSLSMDKNSME 417
SP SD+NSP+LTSE A S N +N PDG +H PS G LSMDK+SME
Sbjct: 360 SPLHSDINSPVLTSEGAIGIPLS--NNSNFSI----DPDGKPEIH-PS-GGLSMDKDSME 411
Query: 418 KLREASAAEAEAANAVWQAAQAASAVPPEETSVSDDNSQVAEATSDGSDTEADVRLHPRA 477
KL + AAEAEAANAVWQ AQAASA+ PE TSVSD++SQV + S+GSD+E+ VRLHPRA
Sbjct: 412 KLTKDFAAEAEAANAVWQLAQAASAI-PEVTSVSDESSQVPDTASEGSDSESAVRLHPRA 470
Query: 478 VVVAKEAVGNLGGMVRQLSLDQFENESRRMIPLNNELSYPTKKFTRQRSPQGLHKKIIST 537
VVVAKE VGNLGGMVRQLSLDQFENESRRM+P N++S PTKKF RQ+SPQGLHKKIIST
Sbjct: 471 VVVAKETVGNLGGMVRQLSLDQFENESRRMVPSYNDISNPTKKFARQKSPQGLHKKIIST 530
Query: 538 LLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLM 597
LLRPRNWKAP NR+FFLDSYEVGELCYAAEQIFM EPTVLQL+APVKVFGDLHGQFGDLM
Sbjct: 531 LLRPRNWKAPVNRKFFLDSYEVGELCYAAEQIFMHEPTVLQLKAPVKVFGDLHGQFGDLM 590
Query: 598 RLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEA 657
RLFDEYGFPSTAGD+TYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEA
Sbjct: 591 RLFDEYGFPSTAGDMTYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEA 650
Query: 658 ADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSV 717
ADINALFGFR+ECIERMGE+DGIWAWTRFNQLFN LPLAALIEKKIICMHGGIGRSI+SV
Sbjct: 651 ADINALFGFRIECIERMGESDGIWAWTRFNQLFNYLPLAALIEKKIICMHGGIGRSINSV 710
Query: 718 EQIEKLERPITMDAGSIILMDLLW 741
EQIEK+ERPITMDAGSI+LMDLLW
Sbjct: 711 EQIEKIERPITMDAGSIVLMDLLW 734
|
Source: Solanum tuberosum Species: Solanum tuberosum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 769 | ||||||
| TAIR|locus:2139399 | 881 | BSL1 "BRI1 suppressor 1 (BSU1) | 0.953 | 0.832 | 0.783 | 0.0 | |
| TAIR|locus:2059610 | 1006 | BSL3 "BRI1 suppressor 1 (BSU1) | 0.509 | 0.389 | 0.586 | 1e-233 | |
| TAIR|locus:2201776 | 1018 | BSL2 "BRI1 suppressor 1 (BSU1) | 0.456 | 0.344 | 0.634 | 1.8e-231 | |
| TAIR|locus:2825042 | 793 | BSU1 "BRI1 SUPPRESSOR 1" [Arab | 0.451 | 0.437 | 0.544 | 3e-191 | |
| GENEDB_PFALCIPARUM|PF14_0630 | 889 | PF14_0630 "protein serine/thre | 0.369 | 0.319 | 0.386 | 2.9e-86 | |
| UNIPROTKB|Q8IKH5 | 889 | PF14_0630 "Serine/threonine-pr | 0.369 | 0.319 | 0.386 | 2.9e-86 | |
| TAIR|locus:2102762 | 312 | TOPP5 "type one serine/threoni | 0.253 | 0.625 | 0.521 | 8.3e-51 | |
| TAIR|locus:2168484 | 312 | TOPP2 "AT5G59160" [Arabidopsis | 0.253 | 0.625 | 0.507 | 2.8e-50 | |
| TAIR|locus:2043122 | 318 | TOPP1 "AT2G29400" [Arabidopsis | 0.256 | 0.619 | 0.475 | 1.1e-48 | |
| TAIR|locus:2180330 | 324 | TOPP8 "AT5G27840" [Arabidopsis | 0.263 | 0.626 | 0.454 | 2.3e-47 |
| TAIR|locus:2139399 BSL1 "BRI1 suppressor 1 (BSU1)-like 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3101 (1096.7 bits), Expect = 0., P = 0.
Identities = 584/745 (78%), Positives = 638/745 (85%)
Query: 1 MNAKPWLHPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGG 60
M +KPWLHPAP Y+TLET+WD ++DAPGPRC HTLTAVAATKT GPRLILFGGATAIEGG
Sbjct: 1 MGSKPWLHPAPQYKTLETFWDDEDDAPGPRCAHTLTAVAATKTHGPRLILFGGATAIEGG 60
Query: 61 ATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRXXXXXXXVGTMVVFQGGIGP 120
+ SS PGIRLAGVTN+VH YD+LTRKWTR++PAGEPPSPR VGTMVVFQGGIGP
Sbjct: 61 S-SSVPGIRLAGVTNTVHSYDILTRKWTRLKPAGEPPSPRAAHAAAAVGTMVVFQGGIGP 119
Query: 121 AGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSD 180
AGHSTDDLYVLD+TNDKFKWHRVVVQG GPGPRYGHVMDLVSQRYLV+V+GNDGKR LSD
Sbjct: 120 AGHSTDDLYVLDMTNDKFKWHRVVVQGDGPGPRYGHVMDLVSQRYLVTVTGNDGKRALSD 179
Query: 181 AWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLM 240
AWALDTAQKPYVWQRLNP+GDRPSARMYA+ SARSDGMFLLCGGRD GAPL DAYGLLM
Sbjct: 180 AWALDTAQKPYVWQRLNPDGDRPSARMYASGSARSDGMFLLCGGRDTLGAPLGDAYGLLM 239
Query: 241 HRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVW 300
HRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHV+GG LRGGR I+ EA+VAVLDTAAGVW
Sbjct: 240 HRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVSGGVLRGGRVIDAEASVAVLDTAAGVW 299
Query: 301 LDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLDDFLVAEN 360
LDRNG VTS+R SKG + DPS ELMRRCRH +AS+G+RIY++GGL+GD+LLDDFLVAEN
Sbjct: 300 LDRNGQVTSARGSKGQIDQDPSFELMRRCRHGAASVGIRIYVHGGLRGDVLLDDFLVAEN 359
Query: 361 SPFQSDVNSPLLTSERAPTHTGSKVNQTNLGYVTTPTPDGLHSPSFG---SLSMDKNSME 417
S FQSD++SPLL S+R T S Y P P G PSF LS+D+NS+E
Sbjct: 360 STFQSDISSPLLASDR--TQQSST---PRFSYAARP-PSG-SEPSFSMSEGLSLDENSLE 412
Query: 418 KLRXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVSDDNSQVAEATSDGSDTEADVRLHPRA 477
KL S SD +S + E+T+DG+ E DVRLHPRA
Sbjct: 413 KLTEASAAEAEVASSVWRAAQLGAGTLDEEPSTSDASSPIVESTTDGTANEGDVRLHPRA 472
Query: 478 VVVAKEAVGNLGGMVRQLSLDQFENESRRMIPLNN-ELSYPTKKFTRQRSPQGLHKKIIS 536
VVVAKE VG+LGGMVRQLSLDQF+NESRRM+P+NN ++ PTKKFTRQ+SPQGLHKK+I+
Sbjct: 473 VVVAKETVGSLGGMVRQLSLDQFQNESRRMVPMNNSDVPQPTKKFTRQKSPQGLHKKVIA 532
Query: 537 TLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDL 596
LLRPRNWK P NR+FFLDSYEVGELCYAAEQIFM E TVLQL+AP+KVFGDLHGQFGDL
Sbjct: 533 ALLRPRNWKPPGNRKFFLDSYEVGELCYAAEQIFMHEQTVLQLKAPIKVFGDLHGQFGDL 592
Query: 597 MRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHE 656
MRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHE
Sbjct: 593 MRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHE 652
Query: 657 AADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHS 716
AADINALFGFRLECIERMGENDGIWAWTRFNQLFN LPLAALIE KIICMHGGIGRSI +
Sbjct: 653 AADINALFGFRLECIERMGENDGIWAWTRFNQLFNYLPLAALIENKIICMHGGIGRSIST 712
Query: 717 VEQIEKLERPITMDAGSIILMDLLW 741
VEQIEK+ERPITMDAGS++LMDLLW
Sbjct: 713 VEQIEKIERPITMDAGSLVLMDLLW 737
|
|
| TAIR|locus:2059610 BSL3 "BRI1 suppressor 1 (BSU1)-like 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1197 (426.4 bits), Expect = 1.0e-233, Sum P(3) = 1.0e-233
Identities = 244/416 (58%), Positives = 289/416 (69%)
Query: 10 APSYRTLETYWDTDEDAPGPRCGHTLTAVAA-----TKT-TGPRLILFGGATAIEG---- 59
AP+Y + + ED PGPRCGHTLTAV A T + GPRLILFGGATA+EG
Sbjct: 74 APTYSVVNAIIEKKEDGPGPRCGHTLTAVPAVGEEGTSSYIGPRLILFGGATALEGNSGG 133
Query: 60 -GATSSA--PGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRXXXXXXXVGTMVVFQG 116
G +SA GIRLAG T VH YDVL+ KW+R+ P GEPPSPR VGTMVV QG
Sbjct: 134 TGTPTSAGSAGIRLAGATADVHCYDVLSNKWSRLTPYGEPPSPRAAHVATAVGTMVVIQG 193
Query: 117 GIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKR 176
GIGPAG S +DL+VLDLT + +WHRVVVQG GPGPRYGHVM LV QRYL+++ GNDGKR
Sbjct: 194 GIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKR 253
Query: 177 VLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAY 236
L+D WALDTA KPY W++L PEG+ P MYATASARSDG+ LLCGGRDA+ PLA AY
Sbjct: 254 PLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAY 313
Query: 237 GLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTA 296
GL HR+G+WEW +APGV+PS RYQHAAVFV ARLHV+GGAL GGR +E ++VAVLDTA
Sbjct: 314 GLAKHRDGRWEWAIAPGVSPSARYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTA 373
Query: 297 AGVWLDRNGLVTSSRTSKGHGEH---DPSLELMRRCRHASASIGVRIYIYGGLKGDILLD 353
AGVW D +VTS RT + + D S+EL RRCRHA+A++G I+IYGGL+G +LLD
Sbjct: 374 AGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAAAAVGDLIFIYGGLRGGVLLD 433
Query: 354 DFLVAENSPFQSDVNSPLLTSERAPTHTGSKVNQTNLGYVTTPTPDGLHSPSFGSL 409
D LVAE D+ + TS A +H + TN +P G G L
Sbjct: 434 DLLVAE------DLAAAETTS--AASHAAAAAAATNTPPGRSPGRYGFSDERTGEL 481
|
|
| TAIR|locus:2201776 BSL2 "BRI1 suppressor 1 (BSU1)-like 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1203 (428.5 bits), Expect = 1.8e-231, Sum P(2) = 1.8e-231
Identities = 233/367 (63%), Positives = 275/367 (74%)
Query: 10 APSYRTLETYWDTDEDAPGPRCGHTLTAVAAT--KTT----GPRLILFGGATAIEG---- 59
AP+Y ++ D ED PGPRCGHTLTAV A + T GPRL+LFGGATA+EG
Sbjct: 85 APTYSVVDAMMDKKEDGPGPRCGHTLTAVPAVGDEGTPGYIGPRLVLFGGATALEGNSGG 144
Query: 60 -GATSSA--PGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRXXXXXXXVGTMVVFQG 116
G +SA GIRLAG T VH YDVL+ KWTR+ P GEPP+PR VGTMVV QG
Sbjct: 145 TGTPTSAGSAGIRLAGATADVHCYDVLSNKWTRLTPFGEPPTPRAAHVATAVGTMVVIQG 204
Query: 117 GIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKR 176
GIGPAG S +DL+VLDLT + +WHRVVVQG GPGPRYGHVM LV QRYL+++ GNDGKR
Sbjct: 205 GIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKR 264
Query: 177 VLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAY 236
L+D WALDTA KPY W++L PEG+ P MYATASARSDG+ LLCGGRDA+ PLA AY
Sbjct: 265 PLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAY 324
Query: 237 GLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTA 296
GL HR+G+WEW +APGV+PS RYQHAAVFV ARLHV+GGAL GGR +E ++VAVLDTA
Sbjct: 325 GLAKHRDGRWEWAIAPGVSPSSRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTA 384
Query: 297 AGVWLDRNGLVTSSRTSKGHGEH---DPSLELMRRCRHASASIGVRIYIYGGLKGDILLD 353
AGVW D +VTS RT + + D S+EL RRCRHA+A++G I+IYGGL+G +LLD
Sbjct: 385 AGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAAAAVGDLIFIYGGLRGGVLLD 444
Query: 354 DFLVAEN 360
D LVAE+
Sbjct: 445 DLLVAED 451
|
|
| TAIR|locus:2825042 BSU1 "BRI1 SUPPRESSOR 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1018 (363.4 bits), Expect = 3.0e-191, Sum P(4) = 3.0e-191
Identities = 195/358 (54%), Positives = 248/358 (69%)
Query: 8 HPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPG 67
+P+PSY +++T++DTDED PGPRCGHTLTAV + +LILFGG+T SS P
Sbjct: 9 YPSPSYESIQTFYDTDEDWPGPRCGHTLTAVFVNNSH--QLILFGGSTTAVANHNSSLPE 66
Query: 68 IRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRXXXXXXXVGTMVVFQGGIGPAGHSTDD 127
I L GVTNSVH +DVLTRKWTR+ P G+ PSPR GT+++ QGGIGP+G S D
Sbjct: 67 ISLDGVTNSVHSFDVLTRKWTRLNPIGDVPSPRACHAAALYGTLILIQGGIGPSGPSDGD 126
Query: 128 LYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTA 187
+Y+LD+TN+K W + +V G+ P PRYGHVMD+ +QR+LV SGN+G +L D WALDT
Sbjct: 127 VYMLDMTNNK--WIKFLVGGETPSPRYGHVMDIAAQRWLVIFSGNNGNEILDDTWALDT- 183
Query: 188 QKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWE 247
+ P+ W RLNP G++PS RMYA+ S+R DG+FLLCGG D SG L D YGL M + W
Sbjct: 184 RGPFSWDRLNPSGNQPSGRMYASGSSREDGIFLLCGGIDHSGVTLGDTYGLKMDSDNVW- 242
Query: 248 WTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLV 307
T P VAPSPRYQH AVF G++LHV GG L R I+GEA VAVLDT G W+D N
Sbjct: 243 -TPVPAVAPSPRYQHTAVFGGSKLHVIGGILNRARLIDGEAVVAVLDTETGEWVDTNQPE 301
Query: 308 TSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLDDFLVAENSPFQS 365
TS+ + ++ +LMRRC HA+AS G +Y++GG++ D+LLDD LVAE S S
Sbjct: 302 TSASGANRQNQY----QLMRRCHHAAASFGSHLYVHGGIREDVLLDDLLVAETSQSSS 355
|
|
| GENEDB_PFALCIPARUM|PF14_0630 PF14_0630 "protein serine/threonine phosphatase" [Plasmodium falciparum (taxid:5833)] | Back alignment and assigned GO terms |
|---|
Score = 520 (188.1 bits), Expect = 2.9e-86, Sum P(2) = 2.9e-86
Identities = 121/313 (38%), Positives = 178/313 (56%)
Query: 451 SDDNSQVAEATSDGSDTEADVRLHPRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMIPL 510
+ NS V ++ + + H AV +E + +VR++S+D+ E E R++
Sbjct: 446 TSSNSSVFRLSNRPMSNKIRLSAHAHAV---QENGSDFAFLVRKISIDKLEEEGRKIN-- 500
Query: 511 NNELSYPTKKFTRQRSPQGLHKKIISTLLRPR--NWKAPANRR----FFLDSYEVGELCY 564
N L P + ++ ++ KII+TLL P ++ N F + + LC
Sbjct: 501 NGVLCTPVNYISEFKNT--VYDKIITTLLNPNITQFEIQYNHNSESIFIIPWANISVLCS 558
Query: 565 AAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFP---------STAGDITYI 615
IF QE VL+LRAP+K++GD+HGQ+ DLMR+F Y P + GDI
Sbjct: 559 IVIDIFKQEDMVLKLRAPIKIYGDIHGQYYDLMRMFQLYKCPVEEDLGEKLNAIGDIDSN 618
Query: 616 DYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMG 675
DYLFLGDYVDRG +SLE I LL ALK +YP+ +HLIRGNHE IN+L+GF+ EC R+
Sbjct: 619 DYLFLGDYVDRGSNSLEVICLLFALKCKYPKQIHLIRGNHEDVAINSLYGFQEECKRRLK 678
Query: 676 EN--DGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITM---- 729
E+ D W + NQ+F LP+ A++E KI+C+HGGIG+SI+ + I +L+RP+ +
Sbjct: 679 EDVTDKDSCWYQINQVFEWLPIGAIVEDKILCVHGGIGKSINQISDISQLKRPLVVSQVP 738
Query: 730 -DAGSIILMDLLW 741
+ + DLLW
Sbjct: 739 QNLNEQKVTDLLW 751
|
|
| UNIPROTKB|Q8IKH5 PF14_0630 "Serine/threonine-protein phosphatase" [Plasmodium falciparum 3D7 (taxid:36329)] | Back alignment and assigned GO terms |
|---|
Score = 520 (188.1 bits), Expect = 2.9e-86, Sum P(2) = 2.9e-86
Identities = 121/313 (38%), Positives = 178/313 (56%)
Query: 451 SDDNSQVAEATSDGSDTEADVRLHPRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMIPL 510
+ NS V ++ + + H AV +E + +VR++S+D+ E E R++
Sbjct: 446 TSSNSSVFRLSNRPMSNKIRLSAHAHAV---QENGSDFAFLVRKISIDKLEEEGRKIN-- 500
Query: 511 NNELSYPTKKFTRQRSPQGLHKKIISTLLRPR--NWKAPANRR----FFLDSYEVGELCY 564
N L P + ++ ++ KII+TLL P ++ N F + + LC
Sbjct: 501 NGVLCTPVNYISEFKNT--VYDKIITTLLNPNITQFEIQYNHNSESIFIIPWANISVLCS 558
Query: 565 AAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFP---------STAGDITYI 615
IF QE VL+LRAP+K++GD+HGQ+ DLMR+F Y P + GDI
Sbjct: 559 IVIDIFKQEDMVLKLRAPIKIYGDIHGQYYDLMRMFQLYKCPVEEDLGEKLNAIGDIDSN 618
Query: 616 DYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMG 675
DYLFLGDYVDRG +SLE I LL ALK +YP+ +HLIRGNHE IN+L+GF+ EC R+
Sbjct: 619 DYLFLGDYVDRGSNSLEVICLLFALKCKYPKQIHLIRGNHEDVAINSLYGFQEECKRRLK 678
Query: 676 EN--DGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITM---- 729
E+ D W + NQ+F LP+ A++E KI+C+HGGIG+SI+ + I +L+RP+ +
Sbjct: 679 EDVTDKDSCWYQINQVFEWLPIGAIVEDKILCVHGGIGKSINQISDISQLKRPLVVSQVP 738
Query: 730 -DAGSIILMDLLW 741
+ + DLLW
Sbjct: 739 QNLNEQKVTDLLW 751
|
|
| TAIR|locus:2102762 TOPP5 "type one serine/threonine protein phosphatase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
Identities = 109/209 (52%), Positives = 143/209 (68%)
Query: 534 IISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQF 593
II LL RN KA + DS E+ +LC+ + +IF+Q+P +L+L APVK+ GD+HGQ+
Sbjct: 17 IIRRLLDYRNPKAGTKQAMLNDS-EIRQLCFVSREIFLQQPCLLELAAPVKICGDIHGQY 75
Query: 594 GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRG 653
DL+RLF+ GFP A +YLFLGDYVDRG+ SLETI LLLA KI+YPEN L+RG
Sbjct: 76 SDLLRLFEYGGFPPAA------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 129
Query: 654 NHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRS 713
NHE A IN ++GF EC R + W F FNCLP+AA+I++KI+CMHGG+
Sbjct: 130 NHECASINRIYGFYDECKRRFN----VKLWKVFTDTFNCLPVAAVIDEKILCMHGGLSPE 185
Query: 714 IHSVEQIEKLERPITM-DAGSIILMDLLW 741
+ +VEQI+ +ERP + DAG +L DLLW
Sbjct: 186 LINVEQIKNIERPTDVPDAG--LLCDLLW 212
|
|
| TAIR|locus:2168484 TOPP2 "AT5G59160" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 106/209 (50%), Positives = 143/209 (68%)
Query: 534 IISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQF 593
II LL RN K P ++ L+ E+ +LC + +IF+Q+P +L+L AP+K+ GD+HGQ+
Sbjct: 17 IIRRLLDYRNPK-PGTKQAMLNESEIRQLCIVSREIFLQQPNLLELEAPIKICGDIHGQY 75
Query: 594 GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRG 653
DL+RLF+ GFP TA +YLFLGDYVDRG+ SLETI LLLA KI+YPEN L+RG
Sbjct: 76 SDLLRLFEYGGFPPTA------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 129
Query: 654 NHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRS 713
NHE A IN ++GF EC R + W F FNCLP+AA+I+ KI+CMHGG+
Sbjct: 130 NHECASINRIYGFYDECKRRFS----VRLWKVFTDSFNCLPVAAVIDDKILCMHGGLSPD 185
Query: 714 IHSVEQIEKLERPITM-DAGSIILMDLLW 741
+ +VEQI+ ++RP + D+G +L DLLW
Sbjct: 186 LTNVEQIKNIKRPTDVPDSG--LLCDLLW 212
|
|
| TAIR|locus:2043122 TOPP1 "AT2G29400" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
Identities = 99/208 (47%), Positives = 139/208 (66%)
Query: 534 IISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQF 593
II L+ RN + + ++ L E+ +LC +++IF+Q+P +L+L AP+K+ GD+HGQ+
Sbjct: 23 IIRRLVEFRNTRPGSGKQVHLSEGEIRQLCAVSKEIFLQQPNLLELEAPIKICGDIHGQY 82
Query: 594 GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRG 653
DL+RLF+ GFP A +YLFLGDYVDRG+ SLETI LLLA KI+YPEN L+RG
Sbjct: 83 SDLLRLFEYGGFPPEA------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 136
Query: 654 NHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRS 713
NHE+A IN ++GF EC R + W F FNCLP+AALI+ +I+CMHGGI
Sbjct: 137 NHESASINRIYGFYDECKRRFN----VRLWKIFTDCFNCLPVAALIDDRILCMHGGISPE 192
Query: 714 IHSVEQIEKLERPITMDAGSIILMDLLW 741
+ S++QI + RP+ + ++ DLLW
Sbjct: 193 LKSLDQIRNIARPMDIPESGLVC-DLLW 219
|
|
| TAIR|locus:2180330 TOPP8 "AT5G27840" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 497 (180.0 bits), Expect = 2.3e-47, P = 2.3e-47
Identities = 99/218 (45%), Positives = 146/218 (66%)
Query: 526 SPQGLHKK-IISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVK 584
S +G+ +K ++ ++R R + ++ L E+ +LC+ A QIF+ +P +L L AP++
Sbjct: 4 SMEGMVEKGVLDDIIR-RLLEGKGGKQVQLSESEIRQLCFNARQIFLSQPNLLDLHAPIR 62
Query: 585 VFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEY 644
+ GD+HGQ+ DL+RLF+ G+P +A +YLFLGDYVDRG+ SLETI LLLA KI Y
Sbjct: 63 ICGDIHGQYQDLLRLFEYGGYPPSA------NYLFLGDYVDRGKQSLETICLLLAYKIRY 116
Query: 645 PENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKII 704
P ++L+RGNHE A IN ++GF EC R + W F FNCLP+AALI++KI+
Sbjct: 117 PSKIYLLRGNHEDAKINRIYGFYDECKRRFN----VRLWKVFTDCFNCLPVAALIDEKIL 172
Query: 705 CMHGGIGRSIHSVEQIEKLERPITM-DAGSIILMDLLW 741
CMHGG+ + ++ QI +++RPI + D+G +L DLLW
Sbjct: 173 CMHGGLSPDLDNLNQIREIQRPIEIPDSG--LLCDLLW 208
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q60EX6 | BSL1_ORYSJ | 3, ., 1, ., 3, ., 1, 6 | 0.7677 | 0.9388 | 0.8176 | yes | no |
| Q8L7U5 | BSL1_ARATH | 3, ., 1, ., 3, ., 1, 6 | 0.8120 | 0.9531 | 0.8320 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 769 | |||
| cd07419 | 311 | cd07419, MPP_Bsu1_C, Arabidopsis thaliana Bsu1 pho | 1e-131 | |
| cd07414 | 293 | cd07414, MPP_PP1_PPKL, PP1, PPKL (PP1 and kelch-li | 6e-73 | |
| smart00156 | 271 | smart00156, PP2Ac, Protein phosphatase 2A homologu | 2e-71 | |
| cd07415 | 285 | cd07415, MPP_PP2A_PP4_PP6, PP2A, PP4, and PP6 phos | 2e-61 | |
| PTZ00480 | 320 | PTZ00480, PTZ00480, serine/threonine-protein phosp | 2e-58 | |
| PTZ00244 | 294 | PTZ00244, PTZ00244, serine/threonine-protein phosp | 8e-52 | |
| cd07416 | 305 | cd07416, MPP_PP2B, PP2B, metallophosphatase domain | 5e-49 | |
| PTZ00239 | 303 | PTZ00239, PTZ00239, serine/threonine protein phosp | 6e-47 | |
| cd00144 | 225 | cd00144, MPP_PPP_family, phosphoprotein phosphatas | 6e-46 | |
| cd07417 | 316 | cd07417, MPP_PP5_C, PP5, C-terminal metallophospha | 3e-38 | |
| cd07420 | 321 | cd07420, MPP_RdgC, Drosophila melanogaster RdgC an | 3e-28 | |
| cd07418 | 377 | cd07418, MPP_PP7, PP7, metallophosphatase domain | 2e-26 | |
| pfam00149 | 185 | pfam00149, Metallophos, Calcineurin-like phosphoes | 1e-25 | |
| cd07424 | 207 | cd07424, MPP_PrpA_PrpB, PrpA and PrpB, metallophos | 4e-10 | |
| cd07422 | 257 | cd07422, MPP_ApaH, Escherichia coli ApaH and relat | 6e-08 | |
| PLN02153 | 341 | PLN02153, PLN02153, epithiospecifier protein | 2e-07 | |
| PLN02193 | 470 | PLN02193, PLN02193, nitrile-specifier protein | 4e-07 | |
| cd07425 | 208 | cd07425, MPP_Shelphs, Shewanella-like phosphatases | 2e-06 | |
| cd00838 | 131 | cd00838, MPP_superfamily, metallophosphatase super | 2e-06 | |
| PLN02153 | 341 | PLN02153, PLN02153, epithiospecifier protein | 3e-06 | |
| PLN02193 | 470 | PLN02193, PLN02193, nitrile-specifier protein | 1e-05 | |
| PHA02239 | 235 | PHA02239, PHA02239, putative protein phosphatase | 1e-05 | |
| pfam13854 | 42 | pfam13854, Kelch_5, Kelch motif | 1e-05 | |
| PRK00166 | 275 | PRK00166, apaH, diadenosine tetraphosphatase; Revi | 2e-05 | |
| cd07423 | 234 | cd07423, MPP_PrpE, Bacillus subtilis PrpE and rela | 6e-05 | |
| PLN02193 | 470 | PLN02193, PLN02193, nitrile-specifier protein | 2e-04 | |
| cd07421 | 304 | cd07421, MPP_Rhilphs, Rhilph phosphatases, metallo | 3e-04 | |
| pfam13415 | 48 | pfam13415, Kelch_3, Galactose oxidase, central dom | 4e-04 | |
| PRK11439 | 218 | PRK11439, pphA, serine/threonine protein phosphata | 4e-04 | |
| cd07413 | 222 | cd07413, MPP_PA3087, Pseudomonas aeruginosa PA3087 | 4e-04 | |
| pfam13418 | 49 | pfam13418, Kelch_4, Galactose oxidase, central dom | 8e-04 | |
| PRK13625 | 245 | PRK13625, PRK13625, bis(5'-nucleosyl)-tetraphospha | 9e-04 | |
| pfam13418 | 49 | pfam13418, Kelch_4, Galactose oxidase, central dom | 0.001 | |
| pfam13415 | 48 | pfam13415, Kelch_3, Galactose oxidase, central dom | 0.002 |
| >gnl|CDD|163662 cd07419, MPP_Bsu1_C, Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Score = 392 bits (1008), Expect = e-131
Identities = 147/212 (69%), Positives = 171/212 (80%), Gaps = 4/212 (1%)
Query: 534 IISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQF 593
II+ LL+PR WK P +RRFF + E+ ELC AAE IF QEP VL+LRAP+K+FGD+HGQF
Sbjct: 1 IITHLLKPRIWKPPTDRRFFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQF 60
Query: 594 GDLMRLFDEYGFPST--AGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLI 651
GDLMRLFDEYG P T AGDI YIDYLFLGDYVDRG +SLETI LLLALK++YP +HLI
Sbjct: 61 GDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDRGSNSLETICLLLALKVKYPNQIHLI 120
Query: 652 RGNHEAADINALFGFRLECIERMGE--NDGIWAWTRFNQLFNCLPLAALIEKKIICMHGG 709
RGNHE DINALFGFR EC ER+GE NDG W R N+LF LPLAA+IE KI+CMHGG
Sbjct: 121 RGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLFEWLPLAAIIEDKILCMHGG 180
Query: 710 IGRSIHSVEQIEKLERPITMDAGSIILMDLLW 741
IGRSI+ V +IE L+RP+TM+ G ++MDLLW
Sbjct: 181 IGRSINHVSEIEDLKRPLTMEFGEQVVMDLLW 212
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 311 |
| >gnl|CDD|163657 cd07414, MPP_PP1_PPKL, PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 239 bits (611), Expect = 6e-73
Identities = 101/209 (48%), Positives = 134/209 (64%), Gaps = 15/209 (7%)
Query: 534 IISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQF 593
II LL R + + L E+ LC + +IF+ +P +L+L AP+K+ GD+HGQ+
Sbjct: 5 IIERLLEVRG--SRPGKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQY 62
Query: 594 GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRG 653
DL+RLF+ GFP + +YLFLGDYVDRG+ SLETI LLLA KI+YPEN L+RG
Sbjct: 63 YDLLRLFEYGGFPPES------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 116
Query: 654 NHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRS 713
NHE A IN ++GF EC R I W F FNCLP+AA+I++KI CMHGG+
Sbjct: 117 NHECASINRIYGFYDECKRRY----NIKLWKTFTDCFNCLPVAAIIDEKIFCMHGGLSPD 172
Query: 714 IHSVEQIEKLERPITM-DAGSIILMDLLW 741
+ S+EQI ++ RP + D G +L DLLW
Sbjct: 173 LQSMEQIRRIMRPTDVPDQG--LLCDLLW 199
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 293 |
| >gnl|CDD|197547 smart00156, PP2Ac, Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Score = 234 bits (599), Expect = 2e-71
Identities = 89/186 (47%), Positives = 122/186 (65%), Gaps = 13/186 (6%)
Query: 557 YEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYID 616
E+ EL ++IF QEP ++++ APV V GD+HGQF DL+RLFD+ G P +
Sbjct: 4 EEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDKNGQPP------ETN 57
Query: 617 YLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGE 676
Y+FLGDYVDRG S+E I LL ALKI YP + L+RGNHE+ +N ++GF EC + GE
Sbjct: 58 YVFLGDYVDRGPFSIEVILLLFALKILYPNRIVLLRGNHESRSMNEIYGFYDECKRKYGE 117
Query: 677 NDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPI-TMDAGSII 735
+ +FN+ F+ LPLAALI KI+CMHGG+ + +++ I KL+RP D G +
Sbjct: 118 R----IYEKFNEAFSWLPLAALINGKILCMHGGLSPDLTTLDDIRKLKRPQEPPDDG--L 171
Query: 736 LMDLLW 741
L+DLLW
Sbjct: 172 LIDLLW 177
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. Length = 271 |
| >gnl|CDD|163658 cd07415, MPP_PP2A_PP4_PP6, PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 208 bits (531), Expect = 2e-61
Identities = 80/172 (46%), Positives = 112/172 (65%), Gaps = 9/172 (5%)
Query: 554 LDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDIT 613
L EV LC A++I ++E V ++R+PV V GD+HGQF DL+ LF GD
Sbjct: 15 LPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELF------RVGGDPP 68
Query: 614 YIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIER 673
+YLFLGDYVDRG +S+ET LLLALK+ YP+ + L+RGNHE+ I ++GF EC+ +
Sbjct: 69 DTNYLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRK 128
Query: 674 MGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLER 725
G N + W LF+ LPLAALI+ +I C+HGG+ SI +++QI ++R
Sbjct: 129 YG-NANV--WKYCTDLFDYLPLAALIDNQIFCVHGGLSPSIDTLDQIRAIDR 177
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2A belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 285 |
| >gnl|CDD|185658 PTZ00480, PTZ00480, serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 201 bits (511), Expect = 2e-58
Identities = 104/209 (49%), Positives = 134/209 (64%), Gaps = 15/209 (7%)
Query: 534 IISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQF 593
II LL R K N L EV LC A IF+ +P +L+L AP+K+ GD+HGQ+
Sbjct: 14 IIERLLSVRGSKPGKNVN--LTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQY 71
Query: 594 GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRG 653
DL+RLF+ G+P + +YLFLGDYVDRG+ SLETI LLLA KI+YPEN L+RG
Sbjct: 72 FDLLRLFEYGGYPPES------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 125
Query: 654 NHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRS 713
NHE A IN ++GF EC R I W F FNCLP+AALI++KI+CMHGG+
Sbjct: 126 NHECASINRIYGFYDECKRRY----TIKLWKTFTDCFNCLPVAALIDEKILCMHGGLSPE 181
Query: 714 IHSVEQIEKLERPITM-DAGSIILMDLLW 741
+ ++EQI ++ RP + D G +L DLLW
Sbjct: 182 LSNLEQIRRIMRPTDVPDTG--LLCDLLW 208
|
Length = 320 |
| >gnl|CDD|140271 PTZ00244, PTZ00244, serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Score = 182 bits (462), Expect = 8e-52
Identities = 88/214 (41%), Positives = 129/214 (60%), Gaps = 15/214 (7%)
Query: 529 GLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGD 588
L + +I +L + + R+ + ++ + +IFM +P +L++R PV+V GD
Sbjct: 2 SLVQTLIEKMLTVKGNRTQ--RQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGD 59
Query: 589 LHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENV 648
HGQ+ DL+R+F++ GFP Y +YLFLGDYVDRG+HS+ETITL KI YPEN
Sbjct: 60 THGQYYDLLRIFEKCGFPP------YSNYLFLGDYVDRGKHSVETITLQFCYKIVYPENF 113
Query: 649 HLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHG 708
L+RGNHE A IN ++GF + R I + F +FN +P+ +I +KIICMHG
Sbjct: 114 FLLRGNHECASINKMYGFFDDVKRRY----NIKLFKAFTDVFNTMPVCCVISEKIICMHG 169
Query: 709 GIGRSIHSVEQIEKLERPITM-DAGSIILMDLLW 741
G+ + S+ + ++ERP + D G IL DLLW
Sbjct: 170 GLSPDLTSLASVNEIERPCDVPDRG--ILCDLLW 201
|
Length = 294 |
| >gnl|CDD|163659 cd07416, MPP_PP2B, PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 174 bits (444), Expect = 5e-49
Identities = 74/181 (40%), Positives = 106/181 (58%), Gaps = 21/181 (11%)
Query: 566 AEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVD 625
+I QEP +L++ APV V GD+HGQF DL++LF+ G P+ YLFLGDYVD
Sbjct: 28 GAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANT------RYLFLGDYVD 81
Query: 626 RGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTR 685
RG S+E + L ALKI YP+ + L+RGNHE + F F+ EC + E +
Sbjct: 82 RGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSER----VYDA 137
Query: 686 FNQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLER----PITMDAGSIILM-DLL 740
+ F+CLPLAAL+ ++ +C+HGG+ + +++ I KL+R P + M DLL
Sbjct: 138 CMEAFDCLPLAALMNQQFLCVHGGLSPELKTLDDIRKLDRFREPP------AFGPMCDLL 191
Query: 741 W 741
W
Sbjct: 192 W 192
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 305 |
| >gnl|CDD|173488 PTZ00239, PTZ00239, serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Score = 168 bits (428), Expect = 6e-47
Identities = 77/180 (42%), Positives = 116/180 (64%), Gaps = 10/180 (5%)
Query: 562 LCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLG 621
+C A++IF++E V +RAPV V GD+HGQF DL LF E GDI +Y+F+G
Sbjct: 24 ICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKE------GGDIPNANYIFIG 77
Query: 622 DYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIW 681
D+VDRG +S+ET+ LL LK++YP N+ L+RGNHE+ ++GF E + + G ++
Sbjct: 78 DFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSN--- 134
Query: 682 AWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLW 741
W F +F+CLPLAALIE +I+C+HGG+ + +++QI ++R I + DL+W
Sbjct: 135 PWRLFMDVFDCLPLAALIEGQILCVHGGLSPDMRTIDQIRTIDRKIEIPHEG-PFCDLMW 193
|
Length = 303 |
| >gnl|CDD|163613 cd00144, MPP_PPP_family, phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 163 bits (414), Expect = 6e-46
Identities = 72/163 (44%), Positives = 93/163 (57%), Gaps = 20/163 (12%)
Query: 585 VFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEY 644
V GD+HG DL+RL ++ GFP +FLGDYVDRG S+E I LLLALKI
Sbjct: 2 VIGDIHGCLDDLLRLLEKIGFPPND------KLIFLGDYVDRGPDSVEVIDLLLALKIL- 54
Query: 645 PENVHLIRGNHEAADINALFGFRLECIE-----RMGENDGIWAWTRFNQLFNCLPLAALI 699
P+NV L+RGNHE +N L+GF E R+ + G W FN +F LPLAALI
Sbjct: 55 PDNVILLRGNHEDMLLNFLYGFYDEDEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALI 114
Query: 700 E-KKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLW 741
E KK++C+HGG+ + EQI++ + DLLW
Sbjct: 115 ETKKVLCVHGGLSPGLPLEEQIKEEPEDQLPE-------DLLW 150
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 225 |
| >gnl|CDD|163660 cd07417, MPP_PP5_C, PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Score = 144 bits (365), Expect = 3e-38
Identities = 68/193 (35%), Positives = 107/193 (55%), Gaps = 25/193 (12%)
Query: 559 VGELCYAAEQIFMQEPTVLQLRAP----VKVFGDLHGQFGDLMRLFDEYGFPSTAGDITY 614
++ +++ + P+++++ P + V GD HGQF DL+ +F+ G PS
Sbjct: 34 AYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFELNGLPSETNP--- 90
Query: 615 IDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERM 674
YLF GD+VDRG S+E I L A K+ YP + HL RGNHE ++N ++GF E +
Sbjct: 91 --YLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKY 148
Query: 675 GENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSV--EQIEKLER----PIT 728
E + F+++FN LPLA LI K++ +HGG+ S V + I K++R P
Sbjct: 149 NEQ----MFDLFSEVFNWLPLAHLINGKVLVVHGGL-FSDDGVTLDDIRKIDRFRQPP-- 201
Query: 729 MDAGSIILMDLLW 741
D+G ++ +LLW
Sbjct: 202 -DSG--LMCELLW 211
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 316 |
| >gnl|CDD|163663 cd07420, MPP_RdgC, Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 3e-28
Identities = 58/171 (33%), Positives = 92/171 (53%), Gaps = 11/171 (6%)
Query: 559 VGELCYAAEQIFMQEPTVLQLRA----PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITY 614
V + A ++ Q P + ++ V + GDLHG+ DL +F + G PS
Sbjct: 25 VLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNGLPSPENP--- 81
Query: 615 IDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERM 674
Y+F GD+VDRG+ S+E + +L A + YP VHL RGNHE +N +GF E + +
Sbjct: 82 --YVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKY 139
Query: 675 GENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLER 725
+ G +F+ LPLA +I+ KI+ +HGGI S ++ ++K++R
Sbjct: 140 KLH-GKKILRLLEDVFSWLPLATIIDNKILVVHGGISDST-DLDLLDKIDR 188
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 321 |
| >gnl|CDD|163661 cd07418, MPP_PP7, PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 2e-26
Identities = 58/167 (34%), Positives = 89/167 (53%), Gaps = 10/167 (5%)
Query: 554 LDSYEVGELCYAAEQIFMQEPTVLQL----RAPVKVFGDLHGQFGDLMRLFDEYGFPSTA 609
L L A +I +EP +++ V V GD+HGQ D++ L ++ GFP
Sbjct: 35 LPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLEDAGFPD-- 92
Query: 610 GDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLE 669
+ Y+ F GDYVDRG LET LLL+ K+ P+ V+L+RGNHE+ +++GF E
Sbjct: 93 QNRFYV---FNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQE 149
Query: 670 CIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHS 716
+ + G + G + + F LPLA++I ++ HGG+ RS
Sbjct: 150 VLTKYG-DKGKHVYRKCLGCFEGLPLASIIAGRVYTAHGGLFRSPSL 195
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 377 |
| >gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase | Back alignment and domain information |
|---|
Score = 104 bits (259), Expect = 1e-25
Identities = 59/174 (33%), Positives = 80/174 (45%), Gaps = 30/174 (17%)
Query: 582 PVKVFGDLHGQFGDL---MRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLL 638
+ V GDLHG DL + L + G P D+ LFLGD VDRG SLE + LL
Sbjct: 1 RILVIGDLHGGLDDLDLLLLLLELLGEPK--PDL----VLFLGDLVDRGPPSLEVLALLF 54
Query: 639 ALKIEYPENVHLIRGNHEAADINALFGFRLECIER---------------------MGEN 677
ALK++ P V+L+RGNH+ N+ GF LEC +
Sbjct: 55 ALKLKAPGPVYLVRGNHDFDSGNSELGFYLECAGLPYVLGNGDVSNGTVEIIGLSSLYGK 114
Query: 678 DGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDA 731
G W F +L + L LAAL++ KI+ +HG + S+ S + I D
Sbjct: 115 GGGLVWEEFLELLDLLLLAALVDGKILLVHGPLSPSLDSGDDIYLFGEEALEDL 168
|
This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues. Length = 185 |
| >gnl|CDD|163667 cd07424, MPP_PrpA_PrpB, PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 59.6 bits (145), Expect = 4e-10
Identities = 35/98 (35%), Positives = 44/98 (44%), Gaps = 14/98 (14%)
Query: 585 VFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLF-LGDYVDRGQHSLETITLLLALKIE 643
V GD+HG + L + D GF D L +GD +DRG SL + LL
Sbjct: 5 VVGDIHGHYSLLQKALDAVGFD------PARDRLISVGDLIDRGPESLACLELL-----L 53
Query: 644 YPENVHLIRGNHEAADINALFGFRLECIERMGENDGIW 681
P H +RGNHE I+AL L+ R N G W
Sbjct: 54 EP-WFHAVRGNHEQMAIDALRAEPLD-AVRWLANGGEW 89
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 207 |
| >gnl|CDD|163665 cd07422, MPP_ApaH, Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 54.4 bits (132), Expect = 6e-08
Identities = 36/144 (25%), Positives = 58/144 (40%), Gaps = 43/144 (29%)
Query: 585 VFGDLHGQFGDLMRLFDEYGF-PSTAGDITYIDYL-FLGDYVDRGQHSLETITLLLALKI 642
GD+ G + +L RL ++ F P+ D L +GD V+RG SLET+ + +L
Sbjct: 3 AIGDIQGCYDELQRLLEKINFDPAK-------DRLWLVGDLVNRGPDSLETLRFVKSLG- 54
Query: 643 EYPENVHLIRGNHEAADINAL---FGFRLECIERMGENDGIWAWTRFNQLFN-------- 691
++ + GNH D++ L G I++ + D + + N
Sbjct: 55 ---DSAKTVLGNH---DLHLLAVAAG-----IKKPKKKD------TLDDILNAPDRDELL 97
Query: 692 ----CLPLAALIEKKIICM-HGGI 710
PL + I M H GI
Sbjct: 98 DWLRHQPLLHRDPELGILMVHAGI 121
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathways in unknown. The PPP (phosphoprotein phosphatase) family, to which ApaH belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and PrpA/PrpB. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 257 |
| >gnl|CDD|177814 PLN02153, PLN02153, epithiospecifier protein | Back alignment and domain information |
|---|
Score = 53.5 bits (128), Expect = 2e-07
Identities = 70/279 (25%), Positives = 111/279 (39%), Gaps = 46/279 (16%)
Query: 86 KWTRI-RPAGEPPSPRAAHAAAAVG-TMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRV 143
W ++ + G+ P PR +H A VG + F G + P H DLYV D +
Sbjct: 8 GWIKVEQKGGKGPGPRCSHGIAVVGDKLYSFGGELKPNEHIDKDLYVFDFNTHTWS---- 63
Query: 144 VVQGQGPGPR---YGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVW-QRLNPE 199
+ G PR G M V + + G D KR SD ++ DT + + + +L+ E
Sbjct: 64 IAPANGDVPRISCLGVRMVAVGTKLYI-FGGRDEKREFSDFYSYDTVKNEWTFLTKLDEE 122
Query: 200 GDRPSARMYATASARSDGMFLLCGGRDASGAPLA-------DAYGLLMHRNGQWEWTLAP 252
G P AR + + ++ + +++ GG G +AY + +G+W P
Sbjct: 123 GG-PEARTFHSMASDENHVYVF-GGVSKGGLMKTPERFRTIEAYNI---ADGKWVQLPDP 177
Query: 253 GVAPSPRYQHAAVFVGARLHVTGG----ALRGGRAIEGEAAVAVLDTAAGVW--LDRNGL 306
G R V ++ V G L GG++ AV D A+G W ++ G
Sbjct: 178 GENFEKRGGAGFAVVQGKIWVVYGFATSILPGGKSDYESNAVQFFDPASGKWTEVETTGA 237
Query: 307 VTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGG 345
S+R+ H A +G I I+GG
Sbjct: 238 KPSARSVFAH-----------------AVVGKYIIIFGG 259
|
Length = 341 |
| >gnl|CDD|177844 PLN02193, PLN02193, nitrile-specifier protein | Back alignment and domain information |
|---|
Score = 53.0 bits (127), Expect = 4e-07
Identities = 65/269 (24%), Positives = 103/269 (38%), Gaps = 60/269 (22%)
Query: 7 LHPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATA---------- 56
L P + + PG RC H + V G ++ FGG
Sbjct: 143 LPSTPKLLGKWIKVEQKGEGPGLRCSHGIAQV------GNKIYSFGGEFTPNQPIDKHLY 196
Query: 57 ---IEGGATSSAP-----------GIRLAGVTNSVHLY---------------DVLTRKW 87
+E S +P G+R+ + ++++++ D T +W
Sbjct: 197 VFDLETRTWSISPATGDVPHLSCLGVRMVSIGSTLYVFGGRDASRQYNGFYSFDTTTNEW 256
Query: 88 TRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTN--DKFKWHRVVV 145
+ P E P+PR+ H+ AA V GG+ +T L LD N DK KW
Sbjct: 257 KLLTPVEEGPTPRSFHSMAADEENVYVFGGVS----ATARLKTLDSYNIVDK-KWFHCST 311
Query: 146 QGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSA 205
G R G +++V + V V G +G V D D Q W ++ G RPS
Sbjct: 312 PGDSFSIRGGAGLEVVQGKVWV-VYGFNGCEV-DDVHYYDPVQDK--WTQVETFGVRPSE 367
Query: 206 R-MYATASARSDGMFLLCGGRDASGAPLA 233
R ++A+A+ G ++ G + + PLA
Sbjct: 368 RSVFASAAV---GKHIVIFGGEIAMDPLA 393
|
Length = 470 |
| >gnl|CDD|163668 cd07425, MPP_Shelphs, Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 49.2 bits (118), Expect = 2e-06
Identities = 32/144 (22%), Positives = 44/144 (30%), Gaps = 24/144 (16%)
Query: 585 VFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLF--LGDYVDRGQHSLETITLLLALKI 642
GDLHG + G + LGD DRG +E + LL L+
Sbjct: 2 AIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQ 61
Query: 643 EYPE---NVHLIRGNHEA-----------ADINALFGFRLECIERMGENDGIWA-WTRFN 687
E + VH + GNHE FG + G W R
Sbjct: 62 EAAKAGGKVHFLLGNHELMNLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSK 121
Query: 688 QLFNCLPLAALIEKKIICMHGGIG 711
+ + +HGG+G
Sbjct: 122 P-------VIVKVNDTLFVHGGLG 138
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 208 |
| >gnl|CDD|163614 cd00838, MPP_superfamily, metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 47.3 bits (112), Expect = 2e-06
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Query: 585 VFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEY 644
V D+HG L + + + D L LGD V G E + LAL +
Sbjct: 2 VISDIHGNLEALEAVLEAALAAAEKPDF----VLVLGDLVGDGPDPEEVLAAALALLLLL 57
Query: 645 PENVHLIRGNHE 656
V+++ GNH+
Sbjct: 58 GIPVYVVPGNHD 69
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 131 |
| >gnl|CDD|177814 PLN02153, PLN02153, epithiospecifier protein | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 3e-06
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 12/115 (10%)
Query: 48 LILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAA 107
++ G + G ATS PG + +N+V +D + KWT + G PS R+ A A
Sbjct: 190 AVVQGKIWVVYGFATSILPGGKSDYESNAVQFFDPASGKWTEVETTGAKPSARSVFAHAV 249
Query: 108 VGTMVVFQGG---------IGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPR 153
VG ++ GG +GP G +++ Y LD + W ++ G+ PR
Sbjct: 250 VGKYIIIFGGEVWPDLKGHLGP-GTLSNEGYALD--TETLVWEKLGECGEPAMPR 301
|
Length = 341 |
| >gnl|CDD|177844 PLN02193, PLN02193, nitrile-specifier protein | Back alignment and domain information |
|---|
Score = 48.4 bits (115), Expect = 1e-05
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 12/78 (15%)
Query: 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGG---------IGPAGHST 125
+ VH YD + KWT++ G PS R+ A+AAVG +V GG +GP G T
Sbjct: 343 DDVHYYDPVQDKWTQVETFGVRPSERSVFASAAVGKHIVIFGGEIAMDPLAHVGP-GQLT 401
Query: 126 DDLYVLDLTNDKFKWHRV 143
D + LD + +W R+
Sbjct: 402 DGTFALD--TETLQWERL 417
|
Length = 470 |
| >gnl|CDD|107154 PHA02239, PHA02239, putative protein phosphatase | Back alignment and domain information |
|---|
Score = 47.3 bits (112), Expect = 1e-05
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 585 VFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEY 644
V D+HG++ L+ + D+ + +FLGDYVDRG+ S + + + L
Sbjct: 5 VVPDIHGEYQKLLTIMDKINNERKPEETI----VFLGDYVDRGKRSKDVVNYIFDLMSN- 59
Query: 645 PENVHLIRGNHEAADINALFGFRLECIERMGENDGIW 681
+NV + GNH+ N +E ++R+ D W
Sbjct: 60 DDNVVTLLGNHDDEFYNI-----MENVDRLSIYDIEW 91
|
Length = 235 |
| >gnl|CDD|222419 pfam13854, Kelch_5, Kelch motif | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 1e-05
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 96 PPSPRAAHAAAAVGT-MVVFQGGIGPAGHSTDDLYVLDLTND 136
P PRA H A VG + ++ G G S+DD+YVL L
Sbjct: 1 LPVPRANHCAVVVGGEIYLYGGYTSGNGQSSDDVYVLSLPGF 42
|
The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that the Drosophila ring canal kelch protein is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415. Length = 42 |
| >gnl|CDD|234673 PRK00166, apaH, diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Score = 46.7 bits (112), Expect = 2e-05
Identities = 33/141 (23%), Positives = 56/141 (39%), Gaps = 37/141 (26%)
Query: 585 VFGDLHGQFGDLMRLFDEYGF-PSTAGDITYIDYL-FLGDYVDRGQHSLETITLLLALKI 642
GD+ G + +L RL ++ F P+ D L +GD V+RG SLE + + +L
Sbjct: 5 AIGDIQGCYDELQRLLEKIDFDPAK-------DTLWLVGDLVNRGPDSLEVLRFVKSLG- 56
Query: 643 EYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFN----------- 691
++ + GNH D++ L I+R + D + +
Sbjct: 57 ---DSAVTVLGNH---DLHLLAVAA--GIKRNKKKD------TLDPILEAPDRDELLDWL 102
Query: 692 -CLPLAA-LIEKKIICMHGGI 710
PL E ++ +H GI
Sbjct: 103 RHQPLLHVDEELGLVMVHAGI 123
|
Length = 275 |
| >gnl|CDD|163666 cd07423, MPP_PrpE, Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 6e-05
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 582 PVKVFGDLHGQFGDLMRLFDEYGFPSTA-GDITYID---YLFLGDYVDRGQHSLETITLL 637
P + GD+HG + +L L ++ G+ G +T+ + +F+GD VDRG S E + L+
Sbjct: 2 PFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLV 61
Query: 638 LALKIEYPENVHLIRGNHE 656
+++ + GNH+
Sbjct: 62 MSMVAA--GAALCVPGNHD 78
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 234 |
| >gnl|CDD|177844 PLN02193, PLN02193, nitrile-specifier protein | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 2e-04
Identities = 53/219 (24%), Positives = 82/219 (37%), Gaps = 10/219 (4%)
Query: 42 KTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRA 101
K G + +L GG I G S + G S+ L KW ++ GE P R
Sbjct: 110 KRPGVKFVLQGGK--IVGFHGRSTDVLHSLGAYISLPSTPKLLGKWIKVEQKGEGPGLRC 167
Query: 102 AHAAAAVGTMVV-FQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDL 160
+H A VG + F G P LYV DL + W G P V +
Sbjct: 168 SHGIAQVGNKIYSFGGEFTPNQPIDKHLYVFDL--ETRTWSISPATGDVPHLSCLGVRMV 225
Query: 161 VSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFL 220
L G D R + ++ DT W+ L P + P+ R + + +A + +++
Sbjct: 226 SIGSTLYVFGGRDASRQYNGFYSFDTTTN--EWKLLTPVEEGPTPRSFHSMAADEENVYV 283
Query: 221 LCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPR 259
G + D+Y ++ + W PG + S R
Sbjct: 284 FGGVSATARLKTLDSYNIVDKK---WFHCSTPGDSFSIR 319
|
Length = 470 |
| >gnl|CDD|163664 cd07421, MPP_Rhilphs, Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 43.3 bits (102), Expect = 3e-04
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 587 GDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPE 646
GD+HG L L+ D +FLGDY DRG + + I L++L ++P+
Sbjct: 8 GDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPK 67
Query: 647 NVHL-IRGNHEAA 658
H+ + GNH+ A
Sbjct: 68 QRHVFLCGNHDFA 80
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 304 |
| >gnl|CDD|222113 pfam13415, Kelch_3, Galactose oxidase, central domain | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 4e-04
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Query: 109 GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVM 158
G + VF GG+G G +DL+V DL + W ++ G PGPR GH
Sbjct: 2 GKIYVF-GGLGDGGTRLNDLWVYDLDTN--TWEKL---GDLPGPRAGHAA 45
|
Length = 48 |
| >gnl|CDD|236911 PRK11439, pphA, serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 4e-04
Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 13/80 (16%)
Query: 585 VFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLF-LGDYVDRGQHSLETITLLLALKIE 643
+ GD+HG F LMR F + D L +GD +DRG SL + LL
Sbjct: 21 LVGDIHGCFEQLMRKLRHCRFDP------WRDLLISVGDLIDRGPQSLRCLQLL------ 68
Query: 644 YPENVHLIRGNHEAADINAL 663
V +RGNHE ++AL
Sbjct: 69 EEHWVRAVRGNHEQMALDAL 88
|
Length = 218 |
| >gnl|CDD|163656 cd07413, MPP_PA3087, Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 4e-04
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 585 VFGDLHGQFGDLMRLFDEYGFPSTAGDITYID--YLFLGDYVDRGQHSLETITLLLALKI 642
GD+HG L+ L + G+ +G + + +FLGD +DRG E + ++ ++
Sbjct: 3 FIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMV- 61
Query: 643 EYPENVH--LIRGNHEAADINAL 663
+ H + GNHE NA+
Sbjct: 62 ---DAGHALAVMGNHE---FNAI 78
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 222 |
| >gnl|CDD|205596 pfam13418, Kelch_4, Galactose oxidase, central domain | Back alignment and domain information |
|---|
Score = 37.6 bits (88), Expect = 8e-04
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 18/65 (27%)
Query: 29 PRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWT 88
PR HT T++ RL LFGG + G L + V ++D+ T WT
Sbjct: 1 PRAYHTSTSIGDG-----RLYLFGG---------ENEDGSVL----SDVWVFDLSTNTWT 42
Query: 89 RIRPA 93
R+
Sbjct: 43 RLPSL 47
|
Length = 49 |
| >gnl|CDD|184187 PRK13625, PRK13625, bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 9e-04
Identities = 36/145 (24%), Positives = 60/145 (41%), Gaps = 26/145 (17%)
Query: 585 VFGDLHGQFGDLMRLFDEYGFPSTAGDITYID---YLFLGDYVDRGQHSLETITLLLALK 641
+ GD+HG + + L ++ G+ ++G + D F+GD DRG HSL I ++ L
Sbjct: 5 IIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWEL- 63
Query: 642 IEYPEN-VHLIRGNHEAADINALFGFRL--------------ECIERMGENDGIWAWTRF 686
+ + + GNH N L+ F L E + + +F
Sbjct: 64 --VEKKAAYYVPGNH----CNKLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKF 117
Query: 687 NQLFNCLPL-AALIEKKIICMHGGI 710
L+ PL L E +++ H GI
Sbjct: 118 ITLYEQAPLYHILDEGRLVVAHAGI 142
|
Length = 245 |
| >gnl|CDD|205596 pfam13418, Kelch_4, Galactose oxidase, central domain | Back alignment and domain information |
|---|
Score = 36.9 bits (86), Expect = 0.001
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Query: 99 PRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRV 143
PRA H + ++ G + +F GG G D++V DL+ + W R+
Sbjct: 1 PRAYHTSTSIGDGRLYLF-GGENEDGSVLSDVWVFDLSTN--TWTRL 44
|
Length = 49 |
| >gnl|CDD|222113 pfam13415, Kelch_3, Galactose oxidase, central domain | Back alignment and domain information |
|---|
Score = 36.1 bits (84), Expect = 0.002
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 16/64 (25%)
Query: 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHA 104
G ++ +FGG + G T N + +YD+ T W ++ G+ P PRA HA
Sbjct: 1 GGKIYVFGG---LGDGGTRL----------NDLWVYDLDTNTWEKL---GDLPGPRAGHA 44
Query: 105 AAAV 108
A +
Sbjct: 45 ATVI 48
|
Length = 48 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 769 | |||
| KOG0372 | 303 | consensus Serine/threonine specific protein phosph | 100.0 | |
| KOG0373 | 306 | consensus Serine/threonine specific protein phosph | 100.0 | |
| KOG0374 | 331 | consensus Serine/threonine specific protein phosph | 100.0 | |
| cd07420 | 321 | MPP_RdgC Drosophila melanogaster RdgC and related | 100.0 | |
| KOG0375 | 517 | consensus Serine-threonine phosphatase 2B, catalyt | 100.0 | |
| PTZ00480 | 320 | serine/threonine-protein phosphatase; Provisional | 100.0 | |
| cd07419 | 311 | MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a | 100.0 | |
| KOG0371 | 319 | consensus Serine/threonine protein phosphatase 2A, | 100.0 | |
| PTZ00239 | 303 | serine/threonine protein phosphatase 2A; Provision | 100.0 | |
| PTZ00244 | 294 | serine/threonine-protein phosphatase PP1; Provisio | 100.0 | |
| cd07414 | 293 | MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme | 100.0 | |
| cd07415 | 285 | MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein | 100.0 | |
| cd07416 | 305 | MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca | 100.0 | |
| cd07418 | 377 | MPP_PP7 PP7, metallophosphatase domain. PP7 is a p | 100.0 | |
| cd07417 | 316 | MPP_PP5_C PP5, C-terminal metallophosphatase domai | 100.0 | |
| smart00156 | 271 | PP2Ac Protein phosphatase 2A homologues, catalytic | 100.0 | |
| PLN02193 | 470 | nitrile-specifier protein | 100.0 | |
| PLN02153 | 341 | epithiospecifier protein | 100.0 | |
| KOG4693 | 392 | consensus Uncharacterized conserved protein, conta | 100.0 | |
| PLN02193 | 470 | nitrile-specifier protein | 100.0 | |
| KOG4152 | 830 | consensus Host cell transcription factor HCFC1 [Ce | 100.0 | |
| KOG1230 | 521 | consensus Protein containing repeated kelch motifs | 100.0 | |
| KOG4441 | 571 | consensus Proteins containing BTB/POZ and Kelch do | 100.0 | |
| KOG4441 | 571 | consensus Proteins containing BTB/POZ and Kelch do | 100.0 | |
| TIGR03547 | 346 | muta_rot_YjhT mutatrotase, YjhT family. Members of | 100.0 | |
| KOG4693 | 392 | consensus Uncharacterized conserved protein, conta | 100.0 | |
| KOG0379 | 482 | consensus Kelch repeat-containing proteins [Genera | 100.0 | |
| PLN02153 | 341 | epithiospecifier protein | 100.0 | |
| PRK14131 | 376 | N-acetylneuraminic acid mutarotase; Provisional | 100.0 | |
| PHA02713 | 557 | hypothetical protein; Provisional | 100.0 | |
| PHA02713 | 557 | hypothetical protein; Provisional | 100.0 | |
| TIGR03548 | 323 | mutarot_permut cyclically-permuted mutatrotase fam | 99.98 | |
| KOG0377 | 631 | consensus Protein serine/threonine phosphatase RDG | 99.97 | |
| KOG0379 | 482 | consensus Kelch repeat-containing proteins [Genera | 99.97 | |
| PHA03098 | 534 | kelch-like protein; Provisional | 99.97 | |
| PHA03098 | 534 | kelch-like protein; Provisional | 99.97 | |
| KOG1230 | 521 | consensus Protein containing repeated kelch motifs | 99.96 | |
| TIGR03548 | 323 | mutarot_permut cyclically-permuted mutatrotase fam | 99.96 | |
| PRK14131 | 376 | N-acetylneuraminic acid mutarotase; Provisional | 99.95 | |
| PHA02790 | 480 | Kelch-like protein; Provisional | 99.95 | |
| TIGR03547 | 346 | muta_rot_YjhT mutatrotase, YjhT family. Members of | 99.94 | |
| KOG4152 | 830 | consensus Host cell transcription factor HCFC1 [Ce | 99.94 | |
| KOG0376 | 476 | consensus Serine-threonine phosphatase 2A, catalyt | 99.94 | |
| PHA02790 | 480 | Kelch-like protein; Provisional | 99.93 | |
| cd00144 | 225 | MPP_PPP_family phosphoprotein phosphatases of the | 99.89 | |
| PRK13625 | 245 | bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision | 99.85 | |
| cd07422 | 257 | MPP_ApaH Escherichia coli ApaH and related protein | 99.83 | |
| TIGR00668 | 279 | apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric | 99.83 | |
| cd07423 | 234 | MPP_PrpE Bacillus subtilis PrpE and related protei | 99.83 | |
| cd07413 | 222 | MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat | 99.82 | |
| PRK11439 | 218 | pphA serine/threonine protein phosphatase 1; Provi | 99.82 | |
| cd07421 | 304 | MPP_Rhilphs Rhilph phosphatases, metallophosphatas | 99.81 | |
| PRK00166 | 275 | apaH diadenosine tetraphosphatase; Reviewed | 99.8 | |
| cd07424 | 207 | MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do | 99.79 | |
| PHA02239 | 235 | putative protein phosphatase | 99.78 | |
| PRK09968 | 218 | serine/threonine-specific protein phosphatase 2; P | 99.74 | |
| cd07425 | 208 | MPP_Shelphs Shewanella-like phosphatases, metallop | 99.74 | |
| COG3055 | 381 | Uncharacterized protein conserved in bacteria [Fun | 99.73 | |
| KOG2437 | 723 | consensus Muskelin [Signal transduction mechanisms | 99.71 | |
| COG3055 | 381 | Uncharacterized protein conserved in bacteria [Fun | 99.57 | |
| KOG2437 | 723 | consensus Muskelin [Signal transduction mechanisms | 99.47 | |
| PF13964 | 50 | Kelch_6: Kelch motif | 98.83 | |
| PF13964 | 50 | Kelch_6: Kelch motif | 98.79 | |
| PLN02772 | 398 | guanylate kinase | 98.77 | |
| PLN02772 | 398 | guanylate kinase | 98.76 | |
| PF13415 | 49 | Kelch_3: Galactose oxidase, central domain | 98.73 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 98.7 | |
| PF13415 | 49 | Kelch_3: Galactose oxidase, central domain | 98.65 | |
| PF00149 | 200 | Metallophos: Calcineurin-like phosphoesterase; Int | 98.58 | |
| PF07646 | 49 | Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is | 98.56 | |
| cd00841 | 155 | MPP_YfcE Escherichia coli YfcE and related protein | 98.55 | |
| PF03089 | 337 | RAG2: Recombination activating protein 2; InterPro | 98.54 | |
| PF07646 | 49 | Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is | 98.54 | |
| PF13418 | 49 | Kelch_4: Galactose oxidase, central domain; PDB: 2 | 98.45 | |
| PF13854 | 42 | Kelch_5: Kelch motif | 98.41 | |
| cd07397 | 238 | MPP_DevT Myxococcus xanthus DevT and related prote | 98.4 | |
| PF13854 | 42 | Kelch_5: Kelch motif | 98.38 | |
| PF01344 | 47 | Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is | 98.38 | |
| PF13418 | 49 | Kelch_4: Galactose oxidase, central domain; PDB: 2 | 98.37 | |
| TIGR00040 | 158 | yfcE phosphoesterase, MJ0936 family. Members of th | 98.37 | |
| PF01344 | 47 | Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is | 98.37 | |
| PF12850 | 156 | Metallophos_2: Calcineurin-like phosphoesterase su | 98.25 | |
| cd07388 | 224 | MPP_Tt1561 Thermus thermophilus Tt1561 and related | 98.12 | |
| PF07250 | 243 | Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP | 98.08 | |
| smart00612 | 47 | Kelch Kelch domain. | 98.0 | |
| cd07379 | 135 | MPP_239FB Homo sapiens 239FB and related proteins, | 97.95 | |
| cd00838 | 131 | MPP_superfamily metallophosphatase superfamily, me | 97.9 | |
| cd07394 | 178 | MPP_Vps29 Homo sapiens Vps29 and related proteins, | 97.86 | |
| PF07250 | 243 | Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP | 97.83 | |
| PF03089 | 337 | RAG2: Recombination activating protein 2; InterPro | 97.8 | |
| smart00612 | 47 | Kelch Kelch domain. | 97.78 | |
| cd07392 | 188 | MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel | 97.74 | |
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 97.53 | |
| cd07404 | 166 | MPP_MS158 Microscilla MS158 and related proteins, | 97.47 | |
| PRK11340 | 271 | phosphodiesterase YaeI; Provisional | 97.44 | |
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 97.36 | |
| cd07385 | 223 | MPP_YkuE_C Bacillus subtilis YkuE and related prot | 97.31 | |
| cd07403 | 129 | MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel | 97.22 | |
| TIGR01640 | 230 | F_box_assoc_1 F-box protein interaction domain. Th | 97.22 | |
| cd07390 | 168 | MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro | 97.22 | |
| PRK05340 | 241 | UDP-2,3-diacylglucosamine hydrolase; Provisional | 97.22 | |
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 97.1 | |
| TIGR03729 | 239 | acc_ester putative phosphoesterase. Members of thi | 97.08 | |
| cd07400 | 144 | MPP_YydB Bacillus subtilis YydB and related protei | 96.97 | |
| TIGR01640 | 230 | F_box_assoc_1 F-box protein interaction domain. Th | 96.97 | |
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 96.91 | |
| cd07396 | 267 | MPP_Nbla03831 Homo sapiens Nbla03831 and related p | 96.85 | |
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 96.83 | |
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 96.79 | |
| TIGR01854 | 231 | lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. | 96.77 | |
| PRK04036 | 504 | DNA polymerase II small subunit; Validated | 96.75 | |
| cd00844 | 262 | MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t | 96.72 | |
| cd07399 | 214 | MPP_YvnB Bacillus subtilis YvnB and related protei | 96.65 | |
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 96.52 | |
| cd07402 | 240 | MPP_GpdQ Enterobacter aerogenes GpdQ and related p | 96.47 | |
| PHA02546 | 340 | 47 endonuclease subunit; Provisional | 96.45 | |
| COG0622 | 172 | Predicted phosphoesterase [General function predic | 96.44 | |
| KOG0376 | 476 | consensus Serine-threonine phosphatase 2A, catalyt | 96.33 | |
| TIGR00619 | 253 | sbcd exonuclease SbcD. This family is based on the | 96.32 | |
| TIGR00024 | 225 | SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 | 96.27 | |
| cd00840 | 223 | MPP_Mre11_N Mre11 nuclease, N-terminal metallophos | 96.21 | |
| cd07386 | 243 | MPP_DNA_pol_II_small_archeal_C archeal DNA polymer | 96.2 | |
| cd08165 | 156 | MPP_MPPE1 human MPPE1 and related proteins, metall | 96.18 | |
| PRK11148 | 275 | cyclic 3',5'-adenosine monophosphate phosphodieste | 96.18 | |
| COG0639 | 155 | ApaH Diadenosine tetraphosphatase and related seri | 96.05 | |
| PRK10966 | 407 | exonuclease subunit SbcD; Provisional | 96.01 | |
| cd07391 | 172 | MPP_PF1019 Pyrococcus furiosus PF1019 and related | 95.93 | |
| cd07393 | 232 | MPP_DR1119 Deinococcus radiodurans DR1119 and rela | 95.87 | |
| cd07383 | 199 | MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase | 95.87 | |
| PF12768 | 281 | Rax2: Cortical protein marker for cell polarity | 95.55 | |
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 95.55 | |
| COG2908 | 237 | Uncharacterized protein conserved in bacteria [Fun | 95.42 | |
| cd07398 | 217 | MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat | 95.38 | |
| TIGR00583 | 405 | mre11 DNA repair protein (mre11). All proteins in | 95.38 | |
| cd07401 | 256 | MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal | 95.32 | |
| COG1409 | 301 | Icc Predicted phosphohydrolases [General function | 94.87 | |
| TIGR03075 | 527 | PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan | 94.75 | |
| cd07380 | 150 | MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re | 94.74 | |
| cd07395 | 262 | MPP_CSTP1 Homo sapiens CSTP1 and related proteins, | 94.74 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 94.69 | |
| cd07384 | 171 | MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re | 94.59 | |
| cd00839 | 294 | MPP_PAPs purple acid phosphatases of the metalloph | 94.54 | |
| cd08166 | 195 | MPP_Cdc1_like_1 uncharacterized subgroup related t | 94.52 | |
| COG1408 | 284 | Predicted phosphohydrolases [General function pred | 94.01 | |
| PF07893 | 342 | DUF1668: Protein of unknown function (DUF1668); In | 93.97 | |
| PF07893 | 342 | DUF1668: Protein of unknown function (DUF1668); In | 93.54 | |
| cd00845 | 252 | MPP_UshA_N_like Escherichia coli UshA-like family, | 93.46 | |
| COG4186 | 186 | Predicted phosphoesterase or phosphohydrolase [Gen | 92.97 | |
| PF14582 | 255 | Metallophos_3: Metallophosphoesterase, calcineurin | 92.9 | |
| COG2129 | 226 | Predicted phosphoesterases, related to the Icc pro | 92.6 | |
| cd08163 | 257 | MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related | 92.39 | |
| COG1520 | 370 | FOG: WD40-like repeat [Function unknown] | 91.87 | |
| PF12768 | 281 | Rax2: Cortical protein marker for cell polarity | 90.55 | |
| PLN02533 | 427 | probable purple acid phosphatase | 89.99 | |
| cd07410 | 277 | MPP_CpdB_N Escherichia coli CpdB and related prote | 89.97 | |
| PF06874 | 640 | FBPase_2: Firmicute fructose-1,6-bisphosphatase; I | 89.56 | |
| COG1407 | 235 | Predicted ICC-like phosphoesterases [General funct | 89.32 | |
| KOG0918 | 476 | consensus Selenium-binding protein [Inorganic ion | 87.66 | |
| COG0420 | 390 | SbcD DNA repair exonuclease [DNA replication, reco | 87.39 | |
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 86.69 | |
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 84.73 | |
| cd07408 | 257 | MPP_SA0022_N Staphylococcus aureus SA0022 and rela | 84.48 | |
| cd07412 | 288 | MPP_YhcR_N Bacillus subtilis YhcR endonuclease and | 83.66 | |
| cd07378 | 277 | MPP_ACP5 Homo sapiens acid phosphatase 5 and relat | 83.64 | |
| KOG3662 | 410 | consensus Cell division control protein/predicted | 82.7 | |
| cd07411 | 264 | MPP_SoxB_N Thermus thermophilus SoxB and related p | 82.0 | |
| KOG2055 | 514 | consensus WD40 repeat protein [General function pr | 81.91 | |
| PF08268 | 129 | FBA_3: F-box associated domain; InterPro: IPR01318 | 81.78 | |
| PLN00033 | 398 | photosystem II stability/assembly factor; Provisio | 81.09 | |
| KOG3325 | 183 | consensus Membrane coat complex Retromer, subunit | 80.59 | |
| PF08321 | 95 | PPP5: PPP5 TPR repeat region; InterPro: IPR013235 | 80.22 |
| >KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-57 Score=433.49 Aligned_cols=218 Identities=40% Similarity=0.671 Sum_probs=206.7
Q ss_pred HHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecCCEEEEccCCCCHHHHHHHHHHhCCCCCCC
Q 004198 531 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG 610 (769)
Q Consensus 531 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~ 610 (769)
+++.|+.|.+.+ ++++.+|..||.++.+||.+|++|+.+.+||+|||||||||+||+.+|+..|.++..
T Consensus 3 ldr~ie~L~~~~----------li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t- 71 (303)
T KOG0372|consen 3 LDRQIEQLRRCE----------LIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPET- 71 (303)
T ss_pred HHHHHHHHHhcC----------CCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCC-
Confidence 467888888763 689999999999999999999999999999999999999999999999999988876
Q ss_pred CCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCCCchhhhHHHhHhh
Q 004198 611 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF 690 (769)
Q Consensus 611 ~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~f 690 (769)
+|+|||||||||.+|+|++.||++||++||++|+|||||||.+.++..|||++||.+||+.. .+|+.+.++|
T Consensus 72 -----~YLFLGDyVDRG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~---~vWr~c~eiF 143 (303)
T KOG0372|consen 72 -----NYLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSA---NVWRYCTEIF 143 (303)
T ss_pred -----ceEeecchhccccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCCh---HHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999854 7999999999
Q ss_pred ccccceEEEeceEEEEcCCCCCCCCChHHhhhccCCcccCCCccceeceeccCCCCC-cccccCcceEEeehhhhhhhc
Q 004198 691 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWFVLNIS-TILRSMVLYIILFSLKIFISF 768 (769)
Q Consensus 691 ~~lP~~~~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~~-~~~~~~~~~~~~~~~~~~~~~ 768 (769)
++||++|+|+++|||||||++|++.+++||+.+.|..++|.++ .++|||||||++. .+--+..+-++.||.++.-+|
T Consensus 144 dyL~l~aiid~kifCVHGGlSP~i~~lDqIr~lDR~~Eiph~g-~m~DllWSDPee~~g~~~SPRGaGylFG~dvv~~F 221 (303)
T KOG0372|consen 144 DYLSLAAIIDGKIFCVHGGLSPSIQTLDQIRVLDRKQEVPHDG-AMCDLLWSDPEEGPGWGLSPRGAGYLFGEDVVESF 221 (303)
T ss_pred HhhhHhheecCcEEEEcCCCCcchhhHHHHHHhhccccCCCCC-cchheeccCcccCCCcccCCCCccccccHHHHHHH
Confidence 9999999999999999999999999999999999999999888 8999999999876 777788888999999998877
|
|
| >KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-52 Score=391.62 Aligned_cols=217 Identities=38% Similarity=0.664 Sum_probs=202.6
Q ss_pred HHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecCCEEEEccCCCCHHHHHHHHHHhCCCCCCCC
Q 004198 532 KKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGD 611 (769)
Q Consensus 532 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~ 611 (769)
++-|+..-+.+ .|+++|+..||+.++++|+.|.+++.+..||.|+|||||||+||+++|+..|-.|+.
T Consensus 7 d~wi~~vk~ck----------yLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP~t-- 74 (306)
T KOG0373|consen 7 DQWIETVKKCK----------YLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVPDT-- 74 (306)
T ss_pred HHHHHHHHHcC----------CCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCCCc--
Confidence 45566655553 589999999999999999999999999999999999999999999999998876655
Q ss_pred CcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCCCchhhhHHHhHhhc
Q 004198 612 ITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFN 691 (769)
Q Consensus 612 ~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~f~ 691 (769)
+|+|+|||||||.+|+|++.+|+.||.+||.+|.+||||||.+.+...|||++||..|||.. ..|+.+.++|+
T Consensus 75 ----nYiFmGDfVDRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGna---n~wkycckVFD 147 (306)
T KOG0373|consen 75 ----NYIFMGDFVDRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNA---NVWKYCCKVFD 147 (306)
T ss_pred ----ceEEeccccccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCc---hHHHHHHHHHh
Confidence 89999999999999999999999999999999999999999999999999999999999875 79999999999
Q ss_pred cccceEEEeceEEEEcCCCCCCCCChHHhhhccCCcccCCCccceeceeccCCCC-CcccccCcceEEeehhhhhhhc
Q 004198 692 CLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWFVLNI-STILRSMVLYIILFSLKIFISF 768 (769)
Q Consensus 692 ~lP~~~~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~-~~~~~~~~~~~~~~~~~~~~~~ 768 (769)
.|+++|+|+++++|||||++|++.++|||+.|.|..++|.++ .+|||+||||++ +.+--+..+-+++||.++--+|
T Consensus 148 ~LtlaAiID~~vLCVHGGLSPdirtlDqir~i~R~qEiPh~G-~fcDlmWSDPedve~W~vSpRGAGwlFGskVt~eF 224 (306)
T KOG0373|consen 148 FLTLAAIIDEKVLCVHGGLSPDIRTLDQIRLIERNQEIPHEG-PFCDLMWSDPEDVETWAVSPRGAGWLFGSKVTTEF 224 (306)
T ss_pred hhhHHHHhcCcEEEEcCCCCccceeHHHHHhHHhhccCCCCC-CccceeccChhhhhhheeCCCCcceeechhhhHHH
Confidence 999999999999999999999999999999999999999988 789999999975 5777888999999999988777
|
|
| >KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-49 Score=414.71 Aligned_cols=229 Identities=49% Similarity=0.839 Sum_probs=205.3
Q ss_pred HHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecCCEEEEccCCCCHHHHHHHHHHhC-CCCCC
Q 004198 531 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYG-FPSTA 609 (769)
Q Consensus 531 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~viGDiHG~~~~l~~~l~~~~-~~~~~ 609 (769)
++++|..++..............++++||.+||..+.++|.++|+++++.+||+|||||||||.||+++|...| +|++.
T Consensus 9 ~~~~i~~~~~~~~~~~~~~~~~~l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~~pp~~ 88 (331)
T KOG0374|consen 9 LDELIRKLLSVGNKKTEKKRQVPLSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGSFPPDQ 88 (331)
T ss_pred HHHHHHHHhhccccCCCcccceeccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCCCCCcc
Confidence 46677777766543333333445899999999999999999999999999999999999999999999999999 88877
Q ss_pred CCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCCCchhhhHHHhHh
Q 004198 610 GDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQL 689 (769)
Q Consensus 610 ~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~ 689 (769)
+|||||||||||++|+|++.||+++|++||++|++||||||.+.+|..|||++||.+||+. ..+|+.|+++
T Consensus 89 ------~ylFLGDYVDRG~~slE~i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~---~~~w~~F~~~ 159 (331)
T KOG0374|consen 89 ------NYVFLGDYVDRGKQSLETICLLFALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGE---IKLWKAFNDA 159 (331)
T ss_pred ------cEEEecccccCCccceEEeehhhhhhhhCCceEEEeccccccccccceeeeHHHHHHhcch---HHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999964 5799999999
Q ss_pred hccccceEEEeceEEEEcCCCCCCCCChHHhhhccCCcccCCCccceeceeccCCCCC--cccccCcceEEeehhhhhhh
Q 004198 690 FNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWFVLNIS--TILRSMVLYIILFSLKIFIS 767 (769)
Q Consensus 690 f~~lP~~~~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~~--~~~~~~~~~~~~~~~~~~~~ 767 (769)
|++||++|+|+++|+|+|||++|.+.++++|+.|.||.+.++.+ +++|||||||+.. .+-.+..+-.++||.+++..
T Consensus 160 f~~mp~~a~i~~kI~CmhGGlsp~l~~~~~i~~i~rp~~~~~~g-ll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~ 238 (331)
T KOG0374|consen 160 FNCLPLAALIDGKILCMHGGLSPHLKSLDQIRAIPRPTDSPDKG-LLCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVED 238 (331)
T ss_pred HhhCchhheecceEEEecCCCChhhcChHHHhhccCCcCCCccc-eeeeeeecCCCCCCCCcccCCCceeeEecHHHHHH
Confidence 99999999999999999999999999999999999998888777 9999999999875 44445555667899998887
Q ss_pred cC
Q 004198 768 FI 769 (769)
Q Consensus 768 ~~ 769 (769)
|+
T Consensus 239 f~ 240 (331)
T KOG0374|consen 239 FC 240 (331)
T ss_pred HH
Confidence 63
|
|
| >cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-46 Score=391.11 Aligned_cols=222 Identities=28% Similarity=0.495 Sum_probs=193.2
Q ss_pred HHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecC----CEEEEccCCCCHHHHHHHHHHhCCC
Q 004198 531 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRA----PVKVFGDLHGQFGDLMRLFDEYGFP 606 (769)
Q Consensus 531 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~----~i~viGDiHG~~~~l~~~l~~~~~~ 606 (769)
++++|+.+++.. .|+.+++.+||++|+++|++||+|+++.. |++||||||||+.+|+++|+..|++
T Consensus 7 ~~~~i~~~~~~~----------~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~g~~ 76 (321)
T cd07420 7 IDALIEAFKEKQ----------LLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNGLP 76 (321)
T ss_pred HHHHHHHHHccC----------CCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHcCCC
Confidence 678889988743 47889999999999999999999999976 8999999999999999999999988
Q ss_pred CCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCCCchhhhHHH
Q 004198 607 STAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRF 686 (769)
Q Consensus 607 ~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~ 686 (769)
+... +|||||||||||++|+||+.+|++||++||+++++||||||.+.++..|||.+||..+|+.. ...+|+.+
T Consensus 77 ~~~~-----~~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~-~~~l~~~~ 150 (321)
T cd07420 77 SPEN-----PYVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLH-GKKILRLL 150 (321)
T ss_pred Cccc-----eEEEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCcc-HHHHHHHH
Confidence 6432 79999999999999999999999999999999999999999999999999999999999753 56799999
Q ss_pred hHhhccccceEEEeceEEEEcCCCCCCCCChHHhhhccCCcc-----cCC---------------------Cccceecee
Q 004198 687 NQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPIT-----MDA---------------------GSIILMDLL 740 (769)
Q Consensus 687 ~~~f~~lP~~~~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~-----~~~---------------------~~~~~~dll 740 (769)
+++|++||+||++++++|||||||++ ..++++|+.++|+.. .+. +..+++|+|
T Consensus 151 ~~~F~~LPlaaii~~~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlL 229 (321)
T cd07420 151 EDVFSWLPLATIIDNKILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDIL 229 (321)
T ss_pred HHHHHhCCceEEEcCCEEEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhheee
Confidence 99999999999999999999999997 578999999988421 111 013678999
Q ss_pred ccCCCCCcc--cccCcceEEeehhhhhhhcC
Q 004198 741 WFVLNISTI--LRSMVLYIILFSLKIFISFI 769 (769)
Q Consensus 741 Wsdp~~~~~--~~~~~~~~~~~~~~~~~~~~ 769 (769)
||||..... -.+.++.+..||.+...+|+
T Consensus 230 WSDP~~~~~~~~~~~RG~g~~FG~~~~~~Fl 260 (321)
T cd07420 230 WSDPKAQKGCKPNTFRGGGCYFGPDVTSKVL 260 (321)
T ss_pred ecCCccCCCCCccCCCCCccccCHHHHHHHH
Confidence 999986432 22346777899999988773
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all |
| >KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-47 Score=382.14 Aligned_cols=183 Identities=39% Similarity=0.712 Sum_probs=175.9
Q ss_pred ccCHHHHHHHHHHHHHHHhcCCceeeecCCEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHH
Q 004198 553 FLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLE 632 (769)
Q Consensus 553 ~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e 632 (769)
.|+++...+|+.++..+|++|++++++++||.|||||||||.||+++|+..|.|... +|+|||||||||.+|+|
T Consensus 60 rl~ee~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t------~YLFLGDYVDRGyFSiE 133 (517)
T KOG0375|consen 60 RLEEEQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANT------RYLFLGDYVDRGYFSIE 133 (517)
T ss_pred chhHHHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccc------eeEeeccccccceeeee
Confidence 378888999999999999999999999999999999999999999999999988765 99999999999999999
Q ss_pred HHHHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCCCchhhhHHHhHhhccccceEEEeceEEEEcCCCCC
Q 004198 633 TITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGR 712 (769)
Q Consensus 633 ~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~f~~lP~~~~i~~~i~~vHgGi~~ 712 (769)
|+.+|.+||+.||..+++||||||++.+...|.|+.||..||. +.+|..+++.|++|||||++++++||||||++|
T Consensus 134 CvlYLwsLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKYs----e~vYdaCmesFd~LPLAAlmNqQflCVHGGlSP 209 (517)
T KOG0375|consen 134 CVLYLWSLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS----ERVYDACMESFDCLPLAALMNQQFLCVHGGLSP 209 (517)
T ss_pred hHHHHHHHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhcc----HHHHHHHHHHhccchHHHHhcCceEEecCCCCc
Confidence 9999999999999999999999999999999999999999995 469999999999999999999999999999999
Q ss_pred CCCChHHhhhccCCcccCCCccceeceeccCCCC
Q 004198 713 SIHSVEQIEKLERPITMDAGSIILMDLLWFVLNI 746 (769)
Q Consensus 713 ~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~ 746 (769)
.+.++++|+++.|..++|.-+ .+||||||||.+
T Consensus 210 Ei~tl~DIr~l~RF~EpPa~G-pmCDLLWsDPlE 242 (517)
T KOG0375|consen 210 EIHTLDDIRKLDRFKEPPAFG-PMCDLLWSDPLE 242 (517)
T ss_pred ccccHHHHHhhhhccCCCccC-cchhhhccChhh
Confidence 999999999999999999877 899999999964
|
|
| >PTZ00480 serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-45 Score=388.36 Aligned_cols=226 Identities=46% Similarity=0.813 Sum_probs=205.8
Q ss_pred HHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecCCEEEEccCCCCHHHHHHHHHHhCCCCCCC
Q 004198 531 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG 610 (769)
Q Consensus 531 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~ 610 (769)
++++|+.+++.+.+++. ....|+++++.+||++|.++|++||+++++.+|+.||||||||+.+|.++|+..++++..
T Consensus 11 ~~~~i~~~~~~~~~~~~--~~~~l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~~~~- 87 (320)
T PTZ00480 11 VDNIIERLLSVRGSKPG--KNVNLTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYPPES- 87 (320)
T ss_pred HHHHHHHHHhccccCcc--ccCCCCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCCCcc-
Confidence 67889999987655532 233689999999999999999999999999999999999999999999999999998766
Q ss_pred CCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCCCchhhhHHHhHhh
Q 004198 611 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF 690 (769)
Q Consensus 611 ~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~f 690 (769)
+|||||||||||++++||+.+|+++|+.+|.++++||||||...++..|||..||..+|+ ..+|..++++|
T Consensus 88 -----~ylfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~----~~l~~~~~~~F 158 (320)
T PTZ00480 88 -----NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYT----IKLWKTFTDCF 158 (320)
T ss_pred -----eEEEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcC----HHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999994 47999999999
Q ss_pred ccccceEEEeceEEEEcCCCCCCCCChHHhhhccCCcccCCCccceeceeccCCCCC--cccccCcceEEeehhhhhhhc
Q 004198 691 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWFVLNIS--TILRSMVLYIILFSLKIFISF 768 (769)
Q Consensus 691 ~~lP~~~~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~~--~~~~~~~~~~~~~~~~~~~~~ 768 (769)
++||+||+|++++|||||||+|.+.++++|+.++||.+++..+ +++|+|||||... .+-.+.++-+++||.+...+|
T Consensus 159 ~~LPlaAiI~~~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~-~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~F 237 (320)
T PTZ00480 159 NCLPVAALIDEKILCMHGGLSPELSNLEQIRRIMRPTDVPDTG-LLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVF 237 (320)
T ss_pred HhccHhheecCcEEEEcCCcCcccCCHHHHhcccCCCCCCccc-hhhheeecCcccccCCCccCCCCCccccCHHHHHHH
Confidence 9999999999999999999999999999999999999887665 8999999999753 455567777889999998877
Q ss_pred C
Q 004198 769 I 769 (769)
Q Consensus 769 ~ 769 (769)
+
T Consensus 238 l 238 (320)
T PTZ00480 238 L 238 (320)
T ss_pred H
Confidence 3
|
|
| >cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-45 Score=386.50 Aligned_cols=235 Identities=63% Similarity=1.066 Sum_probs=206.6
Q ss_pred HHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecCCEEEEccCCCCHHHHHHHHHHhCCCCCC--CC
Q 004198 534 IISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTA--GD 611 (769)
Q Consensus 534 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~~--~~ 611 (769)
+|+++|+|+.|+++.+.++.++++++.+||++|.+||++||+++++..|++||||||||+.+|.++|+.+++++.. ++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~ 80 (311)
T cd07419 1 IITHLLKPRIWKPPTDRRFFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGD 80 (311)
T ss_pred ChHHhcCcccccCccccccCCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCC
Confidence 4789999999999888888999999999999999999999999999999999999999999999999999988641 22
Q ss_pred CcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCC--CchhhhHHHhHh
Q 004198 612 ITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGEN--DGIWAWTRFNQL 689 (769)
Q Consensus 612 ~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~--~~~~~~~~~~~~ 689 (769)
....+|||||||||||++|+|||.+|++||+.+|.++++||||||.+.++..+||..||..+|+.. .+..+|..++++
T Consensus 81 ~~~~~~vfLGDyVDRGp~s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~ 160 (311)
T cd07419 81 IEYIDYLFLGDYVDRGSNSLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRL 160 (311)
T ss_pred CcCceEEEECCccCCCCChHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHH
Confidence 222379999999999999999999999999999999999999999999999999999999999762 345799999999
Q ss_pred hccccceEEEeceEEEEcCCCCCCCCChHHhhhccCCcccCCCccceeceeccCCCCCcccc----cC---cceE--Eee
Q 004198 690 FNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWFVLNISTILR----SM---VLYI--ILF 760 (769)
Q Consensus 690 f~~lP~~~~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~~~~~~----~~---~~~~--~~~ 760 (769)
|++||++++++++++|||||++|.+.++++|+.+.||...+....+++|+|||||...+... +. .+.+ +.|
T Consensus 161 f~~LPl~avi~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~f 240 (311)
T cd07419 161 FEWLPLAAIIEDKILCMHGGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKF 240 (311)
T ss_pred HHhCchhheecccEEEEccCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeE
Confidence 99999999999999999999999999999999999998554444589999999998643221 11 4455 588
Q ss_pred hhhhhhhc
Q 004198 761 SLKIFISF 768 (769)
Q Consensus 761 ~~~~~~~~ 768 (769)
|.+..-.|
T Consensus 241 g~~~~~~F 248 (311)
T cd07419 241 GPDRVHRF 248 (311)
T ss_pred CHHHHHHH
Confidence 88887766
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most |
| >KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-45 Score=356.78 Aligned_cols=218 Identities=39% Similarity=0.677 Sum_probs=195.8
Q ss_pred HHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecCCEEEEccCCCCHHHHHHHHHHhCCCCCCC
Q 004198 531 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG 610 (769)
Q Consensus 531 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~ 610 (769)
++..|..|...+ .+++.++..||+.|+++|++|.+|..++.|++|+||+||||++|+++|+..|..++.
T Consensus 20 vd~~ie~L~~ck----------~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~pdt- 88 (319)
T KOG0371|consen 20 VDPWIEQLYKCK----------PLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAPDT- 88 (319)
T ss_pred cccchHHHHhcC----------CCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCCCc-
Confidence 456778877764 478889999999999999999999999999999999999999999999988877765
Q ss_pred CCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCCCchhhhHHHhHhh
Q 004198 611 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF 690 (769)
Q Consensus 611 ~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~f 690 (769)
+|+|+|||||||++|.|++.+|.++|++||++|.+||||||.+.+...|||++||.+|||.. .+|+.|.+.|
T Consensus 89 -----nylfmGDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~a---nvw~~Ftdlf 160 (319)
T KOG0371|consen 89 -----NYLFMGDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNA---NVWKYFTDLF 160 (319)
T ss_pred -----ceeeeeeecccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccc---cchHHhhhhh
Confidence 89999999999999999999999999999999999999999999999999999999999865 7999999999
Q ss_pred ccccceEEEeceEEEEcCCCCCCCCChHHhhhccCCcccCCCccceeceeccCCCCC-cccccCcceEEeehhhhhhhc
Q 004198 691 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWFVLNIS-TILRSMVLYIILFSLKIFISF 768 (769)
Q Consensus 691 ~~lP~~~~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~~-~~~~~~~~~~~~~~~~~~~~~ 768 (769)
+++|++|+|+++|||.|||++|++.+++.++.++|-.++|.++ -+||||||||++. .+-.+..+-++.||.++--.|
T Consensus 161 dy~P~tali~~~ifc~HGgLspsi~tld~~r~~dr~~evpheg-pmcDlLwsdpddr~gwg~sprgag~tfg~di~~~f 238 (319)
T KOG0371|consen 161 DYLPLTALIESKIFCLHGGLSPSIDTLDLIRLLDRIQEVPHEG-PMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQF 238 (319)
T ss_pred hccchHhhhccceeeccCCcCcccchHHHHHHHHHhhcccCCC-ChhheeccCcccCCCCCCCCCCCCcccchhhHHHh
Confidence 9999999999999999999999999999999999988898888 6789999999875 333344555566777764433
|
|
| >PTZ00239 serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-44 Score=378.09 Aligned_cols=218 Identities=39% Similarity=0.703 Sum_probs=199.4
Q ss_pred HHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecCCEEEEccCCCCHHHHHHHHHHhCCCCCCC
Q 004198 531 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG 610 (769)
Q Consensus 531 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~ 610 (769)
++++|+.+++.. .|+++++.+||++|++||++||+++++..|++||||||||+.+|.++|+..+.++..
T Consensus 3 ~~~~~~~~~~~~----------~l~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~- 71 (303)
T PTZ00239 3 IDRHIATLLNGG----------CLPERDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNA- 71 (303)
T ss_pred HHHHHHHHHccC----------CCCHHHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCc-
Confidence 467788877642 478999999999999999999999999999999999999999999999999887665
Q ss_pred CCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCCCchhhhHHHhHhh
Q 004198 611 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF 690 (769)
Q Consensus 611 ~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~f 690 (769)
+|||||||||||++++|++.+|+++|+.+|.++++||||||.+.++..|||.+|+..+|+.. .+|+.++++|
T Consensus 72 -----~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~---~~~~~~~~~f 143 (303)
T PTZ00239 72 -----NYIFIGDFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNS---NPWRLFMDVF 143 (303)
T ss_pred -----eEEEeeeEcCCCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcCh---hHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999743 5899999999
Q ss_pred ccccceEEEeceEEEEcCCCCCCCCChHHhhhccCCcccCCCccceeceeccCCCC-CcccccCcceEEeehhhhhhhc
Q 004198 691 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWFVLNI-STILRSMVLYIILFSLKIFISF 768 (769)
Q Consensus 691 ~~lP~~~~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~-~~~~~~~~~~~~~~~~~~~~~~ 768 (769)
++||++|+++++++||||||+|.+.++++|+.++||.+++.++ +++|+|||||.+ +.+..+.++.+..||.+...+|
T Consensus 144 ~~LPlaaii~~~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~-~~~dllWsDP~~~~~~~~~~Rg~g~~fg~~~~~~F 221 (303)
T PTZ00239 144 DCLPLAALIEGQILCVHGGLSPDMRTIDQIRTIDRKIEIPHEG-PFCDLMWSDPEEVEYWAVNSRGAGYLFGAKVTKEF 221 (303)
T ss_pred HhCchheEEcCeEEEEcCccCcccccHhhhccccCCCCCCCCC-CceeeEecCccccCCCccCCCCCccccCHHHHHHH
Confidence 9999999999999999999999999999999999999988766 789999999974 3455667888889999988777
|
|
| >PTZ00244 serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-44 Score=378.25 Aligned_cols=226 Identities=40% Similarity=0.746 Sum_probs=204.3
Q ss_pred HHHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecCCEEEEccCCCCHHHHHHHHHHhCCCCCC
Q 004198 530 LHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTA 609 (769)
Q Consensus 530 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~~ 609 (769)
+++++|.++++...+. ......++.+++.+||++|+++|++||+++++.+|++||||||||+.+|+++|+.+++++.+
T Consensus 3 ~~~~~i~~~~~~~~~~--~~~~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~~ 80 (294)
T PTZ00244 3 LVQTLIEKMLTVKGNR--TQRQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPYS 80 (294)
T ss_pred hHHHHHHHHHhcccCC--CccccCCCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCcc
Confidence 4578888888865332 22344789999999999999999999999999999999999999999999999999998765
Q ss_pred CCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCCCchhhhHHHhHh
Q 004198 610 GDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQL 689 (769)
Q Consensus 610 ~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~ 689 (769)
+|||||||||||++|+||+.+++++|+.+|.++++||||||.+.++..|||.+|+..+|+ ..+|..++++
T Consensus 81 ------~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~----~~l~~~~~~~ 150 (294)
T PTZ00244 81 ------NYLFLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYN----IKLFKAFTDV 150 (294)
T ss_pred ------cEEEeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhh----HHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999994 5699999999
Q ss_pred hccccceEEEeceEEEEcCCCCCCCCChHHhhhccCCcccCCCccceeceeccCCCC--CcccccCcceEEeehhhhhhh
Q 004198 690 FNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWFVLNI--STILRSMVLYIILFSLKIFIS 767 (769)
Q Consensus 690 f~~lP~~~~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~--~~~~~~~~~~~~~~~~~~~~~ 767 (769)
|++||++|+++++++|||||++|.+.++++|+.++||.+.+..+ +++|+|||||.. ..+..+.++.+..||.+...+
T Consensus 151 f~~lPlaaii~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~-~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~ 229 (294)
T PTZ00244 151 FNTMPVCCVISEKIICMHGGLSPDLTSLASVNEIERPCDVPDRG-ILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVND 229 (294)
T ss_pred HHhCchheEecCeeEEEcCCCCchhhHHHHhhhhccccCCCccc-hhheeeecCcccccCCCCcCCCCCccccCHHHHHH
Confidence 99999999999999999999999999999999999999887665 899999999975 355566678888999998877
Q ss_pred c
Q 004198 768 F 768 (769)
Q Consensus 768 ~ 768 (769)
|
T Consensus 230 F 230 (294)
T PTZ00244 230 F 230 (294)
T ss_pred H
Confidence 7
|
|
| >cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-44 Score=379.29 Aligned_cols=226 Identities=45% Similarity=0.814 Sum_probs=203.5
Q ss_pred HHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecCCEEEEccCCCCHHHHHHHHHHhCCCCCCC
Q 004198 531 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG 610 (769)
Q Consensus 531 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~ 610 (769)
++++|+.+++.+.++. .....++++++.+||++|+++|++||+++++..|++||||||||+.+|.++|+..++++.+
T Consensus 2 ~~~~i~~~~~~~~~~~--~~~~~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~- 78 (293)
T cd07414 2 IDSIIERLLEVRGSRP--GKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES- 78 (293)
T ss_pred HHHHHHHHHhccccCC--cccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcc-
Confidence 3667888887654443 2344689999999999999999999999999999999999999999999999999998766
Q ss_pred CCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCCCchhhhHHHhHhh
Q 004198 611 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF 690 (769)
Q Consensus 611 ~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~f 690 (769)
+|||||||||||++++|++.+|+++|+.+|.++++||||||.+.++..+||.+||..+|+ ..+|..++++|
T Consensus 79 -----~~lfLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~----~~l~~~~~~~f 149 (293)
T cd07414 79 -----NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN----IKLWKTFTDCF 149 (293)
T ss_pred -----eEEEEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhh----HHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999984 56999999999
Q ss_pred ccccceEEEeceEEEEcCCCCCCCCChHHhhhccCCcccCCCccceeceeccCCCCC--cccccCcceEEeehhhhhhhc
Q 004198 691 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWFVLNIS--TILRSMVLYIILFSLKIFISF 768 (769)
Q Consensus 691 ~~lP~~~~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~~--~~~~~~~~~~~~~~~~~~~~~ 768 (769)
++||++|+++++++|||||++|.+.++++|+.++||.+++..+ +++|+|||||... .+-.+.++.+..||.+...+|
T Consensus 150 ~~lPlaa~i~~~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~-~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~F 228 (293)
T cd07414 150 NCLPVAAIIDEKIFCMHGGLSPDLQSMEQIRRIMRPTDVPDQG-LLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKF 228 (293)
T ss_pred HHhHHHHhhCCcEEEEccCCCcccCcHHHHhcccCCCCCCchh-hHhhhhccCcccccCCCccCCCCcceecCHHHHHHH
Confidence 9999999999999999999999999999999999999887665 8999999999753 444456777889999988877
Q ss_pred C
Q 004198 769 I 769 (769)
Q Consensus 769 ~ 769 (769)
+
T Consensus 229 l 229 (293)
T cd07414 229 L 229 (293)
T ss_pred H
Confidence 3
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg |
| >cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-44 Score=375.98 Aligned_cols=219 Identities=41% Similarity=0.688 Sum_probs=200.0
Q ss_pred HHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecCCEEEEccCCCCHHHHHHHHHHhCCCCCCC
Q 004198 531 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG 610 (769)
Q Consensus 531 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~ 610 (769)
++++|+.+++.. .|+.+++.+||++|+++|++||+++++..|++||||||||+.+|+++|+..++++..
T Consensus 2 ~~~~~~~~~~~~----------~l~~~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~- 70 (285)
T cd07415 2 LDKWIEQLKKCE----------LLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDT- 70 (285)
T ss_pred HHHHHHHHHccC----------CCCHHHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCC-
Confidence 366788888642 478999999999999999999999999999999999999999999999999987765
Q ss_pred CCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCCCchhhhHHHhHhh
Q 004198 611 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF 690 (769)
Q Consensus 611 ~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~f 690 (769)
+|||||||||||++|+||+.+|++||+.+|.++++||||||.+.++..|||.+||..+|+. ..+|..++++|
T Consensus 71 -----~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~---~~l~~~~~~~f 142 (285)
T cd07415 71 -----NYLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGN---ANVWKYCTDLF 142 (285)
T ss_pred -----eEEEEeEECCCCcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCc---hHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999964 36999999999
Q ss_pred ccccceEEEeceEEEEcCCCCCCCCChHHhhhccCCcccCCCccceeceeccCCCCC-cccccCcceEEeehhhhhhhcC
Q 004198 691 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWFVLNIS-TILRSMVLYIILFSLKIFISFI 769 (769)
Q Consensus 691 ~~lP~~~~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~~-~~~~~~~~~~~~~~~~~~~~~~ 769 (769)
++||++|+++++++||||||+|.+.++++|+.++||.+++.++ +++|+|||||... .+-.+.++.+..||.+...+|+
T Consensus 143 ~~lPlaaii~~~i~cvHgGi~p~~~~~~~i~~i~r~~~~~~~~-~~~dllWsDP~~~~~~~~~~Rg~g~~fg~~~~~~Fl 221 (285)
T cd07415 143 DYLPLAALIDNQIFCVHGGLSPSIDTLDQIRAIDRFQEVPHEG-PMCDLLWSDPDDIEGWGISPRGAGYLFGQDVVEEFN 221 (285)
T ss_pred HHhHHHhEeCCeEEEEcCCCCCCcccHHHhhcccCCCCCCCCC-CccceEecCCCccCCCCcCCCCCccccCHHHHHHHH
Confidence 9999999999999999999999999999999999999887665 7899999999865 3445667778899999988773
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2 |
| >cd07416 MPP_PP2B PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-43 Score=373.69 Aligned_cols=217 Identities=35% Similarity=0.634 Sum_probs=194.5
Q ss_pred HHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecCCEEEEccCCCCHHHHHHHHHHhCCCCCCCC
Q 004198 532 KKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGD 611 (769)
Q Consensus 532 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~ 611 (769)
+-+++.+.+.. .|+++++.+||++|+++|++||+++++..|++||||||||+.+|.++|+..+.++.+
T Consensus 4 ~~~~~~~~~~~----------~l~~~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~-- 71 (305)
T cd07416 4 DVLKAHFMREG----------RLSEEDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANT-- 71 (305)
T ss_pred HHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCc--
Confidence 34556666542 378899999999999999999999999999999999999999999999999988765
Q ss_pred CcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCCCchhhhHHHhHhhc
Q 004198 612 ITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFN 691 (769)
Q Consensus 612 ~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~f~ 691 (769)
+|||||||||||++|+||+.+|++||+.+|.++++||||||.+.++..+||..|+..+| +..+|..++++|+
T Consensus 72 ----~ylFLGDyVDRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y----~~~l~~~~~~~f~ 143 (305)
T cd07416 72 ----RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY----SERVYDACMEAFD 143 (305)
T ss_pred ----eEEEECCccCCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhc----cHHHHHHHHHHHh
Confidence 89999999999999999999999999999999999999999999999999999999888 4578999999999
Q ss_pred cccceEEEeceEEEEcCCCCCCCCChHHhhhccCCcccCCCccceeceeccCCCCCcc-------c--ccCcceEEeehh
Q 004198 692 CLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWFVLNISTI-------L--RSMVLYIILFSL 762 (769)
Q Consensus 692 ~lP~~~~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~~~~-------~--~~~~~~~~~~~~ 762 (769)
+||++++++++++||||||+|.+.++++|++++||.+.+..+ +++|+|||||..... + .+.++.++.||.
T Consensus 144 ~LPlaaii~~~i~~vHGGi~p~~~~l~~i~~i~r~~~~~~~~-~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~ 222 (305)
T cd07416 144 CLPLAALMNQQFLCVHGGLSPELKTLDDIRKLDRFREPPAFG-PMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSY 222 (305)
T ss_pred hccceeEEcCCEEEEcCCCCcccccHHHhcccCCCCCCCCCC-cceeeeecCcccccccccccccccccCCCCCceecCH
Confidence 999999999999999999999999999999999998877665 889999999975422 1 235677789999
Q ss_pred hhhhhcC
Q 004198 763 KIFISFI 769 (769)
Q Consensus 763 ~~~~~~~ 769 (769)
+...+|+
T Consensus 223 ~~~~~Fl 229 (305)
T cd07416 223 RAVCEFL 229 (305)
T ss_pred HHHHHHH
Confidence 9888773
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G |
| >cd07418 MPP_PP7 PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-43 Score=374.60 Aligned_cols=235 Identities=29% Similarity=0.507 Sum_probs=199.5
Q ss_pred chHHHHHHHHHhCCC-CCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeec----CCEEEEccCCCCHHHHHHHHHH
Q 004198 528 QGLHKKIISTLLRPR-NWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLR----APVKVFGDLHGQFGDLMRLFDE 602 (769)
Q Consensus 528 ~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~----~~i~viGDiHG~~~~l~~~l~~ 602 (769)
.+..++||+.+.... ..+ +......++.+++.+||++|.+||++||+++++. +|++||||||||+.+|+++|+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~ll~~ 87 (377)
T cd07418 9 NEWVHELMSVFEWSSRNLP-PSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLED 87 (377)
T ss_pred HHHHHHHHHHHHhcccccC-chhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHHHHH
Confidence 445678888775432 222 2223346899999999999999999999999998 8999999999999999999999
Q ss_pred hCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCCCchhh
Q 004198 603 YGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWA 682 (769)
Q Consensus 603 ~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~ 682 (769)
.++++.+. +|||||||||||++|+|||.+|++||+.+|.+|++||||||.+.++..+||.+||..+|+.. +..+
T Consensus 88 ~g~~~~~~-----~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~-~~~l 161 (377)
T cd07418 88 AGFPDQNR-----FYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDK-GKHV 161 (377)
T ss_pred hCCCCCCc-----eEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCch-HHHH
Confidence 99876542 69999999999999999999999999999999999999999999999999999999999754 5679
Q ss_pred hHHHhHhhccccceEEEeceEEEEcCCC---------------------------CCCCCChHHhhhccCCc-ccCCCc-
Q 004198 683 WTRFNQLFNCLPLAALIEKKIICMHGGI---------------------------GRSIHSVEQIEKLERPI-TMDAGS- 733 (769)
Q Consensus 683 ~~~~~~~f~~lP~~~~i~~~i~~vHgGi---------------------------~~~~~~~~~i~~~~rp~-~~~~~~- 733 (769)
|+.++++|++||+++++++++||||||| +|.+.++++|+.++||. +.+..+
T Consensus 162 ~~~~~~~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~ 241 (377)
T cd07418 162 YRKCLGCFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGS 241 (377)
T ss_pred HHHHHHHHHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCc
Confidence 9999999999999999999999999999 45678999999999985 444433
Q ss_pred -cceeceeccCCCCCcc-ccc-CcceEEeehhhhhhhcC
Q 004198 734 -IILMDLLWFVLNISTI-LRS-MVLYIILFSLKIFISFI 769 (769)
Q Consensus 734 -~~~~dllWsdp~~~~~-~~~-~~~~~~~~~~~~~~~~~ 769 (769)
.+++|||||||..... ..+ .++.++.||.+...+|+
T Consensus 242 ~~i~~dlLWSDP~~~~g~~~~~~RG~g~~FG~~~~~~FL 280 (377)
T cd07418 242 NLIPGDVLWSDPSLTPGLSPNKQRGIGLLWGPDCTEEFL 280 (377)
T ss_pred cccceeeEeeCCccCCCCCccCCCCCccccCHHHHHHHH
Confidence 2578999999986533 333 47778899999988874
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, |
| >cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-43 Score=369.92 Aligned_cols=223 Identities=30% Similarity=0.533 Sum_probs=200.0
Q ss_pred cchHHHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecCC----EEEEccCCCCHHHHHHHHHH
Q 004198 527 PQGLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAP----VKVFGDLHGQFGDLMRLFDE 602 (769)
Q Consensus 527 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~----i~viGDiHG~~~~l~~~l~~ 602 (769)
+..+++++++.+.+.+ .|+.+++.+||++|.++|++||+++++..| ++||||||||+.+|+++|+.
T Consensus 12 ~~~~~~~~~~~~~~~~----------~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~ 81 (316)
T cd07417 12 TLEFVKEMIEWFKDQK----------KLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFEL 81 (316)
T ss_pred CHHHHHHHHHHHHccC----------CCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHh
Confidence 4566788999988753 478899999999999999999999999877 99999999999999999999
Q ss_pred hCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCCCchhh
Q 004198 603 YGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWA 682 (769)
Q Consensus 603 ~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~ 682 (769)
.++++..+ +|||||||||||++|+||+.+|++||+.+|.++++||||||.+.++..+||..|+..+|+ ..+
T Consensus 82 ~g~~~~~~-----~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~~----~~l 152 (316)
T cd07417 82 NGLPSETN-----PYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYN----EQM 152 (316)
T ss_pred cCCCCccC-----eEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhccc----HHH
Confidence 99876542 799999999999999999999999999999999999999999999999999999999884 468
Q ss_pred hHHHhHhhccccceEEEeceEEEEcCCC-CCCCCChHHhhhccCCcccCCCccceeceeccCCCCC-cccccCcceEEee
Q 004198 683 WTRFNQLFNCLPLAALIEKKIICMHGGI-GRSIHSVEQIEKLERPITMDAGSIILMDLLWFVLNIS-TILRSMVLYIILF 760 (769)
Q Consensus 683 ~~~~~~~f~~lP~~~~i~~~i~~vHgGi-~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~~-~~~~~~~~~~~~~ 760 (769)
|+.+.++|++||++++++++++|||||| ++.+.++++|++++||.+.+.++ +++|+|||||.+. .+..+.++.+..|
T Consensus 153 ~~~~~~~f~~LPlaaii~~~~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~-~~~dllWsDP~~~~~~~~s~Rg~g~~f 231 (316)
T cd07417 153 FDLFSEVFNWLPLAHLINGKVLVVHGGLFSDDGVTLDDIRKIDRFRQPPDSG-LMCELLWSDPQPQPGRSPSKRGVGCQF 231 (316)
T ss_pred HHHHHHHHHhchHhheeCCeEEEEccccccCCCccHHHhhcccCCCCCCccc-cceeeeecCCCCCCCCCccCCCCceEe
Confidence 9999999999999999999999999999 56789999999999998776555 8999999999864 4455667778899
Q ss_pred hhhhhhhcC
Q 004198 761 SLKIFISFI 769 (769)
Q Consensus 761 ~~~~~~~~~ 769 (769)
|.+....|+
T Consensus 232 g~~~~~~Fl 240 (316)
T cd07417 232 GPDVTKRFL 240 (316)
T ss_pred CHHHHHHHH
Confidence 999987773
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel |
| >smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-43 Score=364.03 Aligned_cols=204 Identities=44% Similarity=0.766 Sum_probs=188.4
Q ss_pred CHHHHHHHHHHHHHHHhcCCceeeecCCEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHH
Q 004198 555 DSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETI 634 (769)
Q Consensus 555 ~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l 634 (769)
+++++.+||++|+++|++||+++++..|++||||||||+.+|.++|+..+.++.+ +|||||||||||++|+||+
T Consensus 2 ~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~------~~vfLGD~VDrG~~s~e~l 75 (271)
T smart00156 2 YAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDT------NYVFLGDYVDRGPFSIEVI 75 (271)
T ss_pred CHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCc------eEEEeCCccCCCCChHHHH
Confidence 5789999999999999999999999999999999999999999999999987765 8999999999999999999
Q ss_pred HHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCCCchhhhHHHhHhhccccceEEEeceEEEEcCCCCCCC
Q 004198 635 TLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSI 714 (769)
Q Consensus 635 ~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~f~~lP~~~~i~~~i~~vHgGi~~~~ 714 (769)
.+|++||+.+|.++++||||||.+.++..+||.+|+..+|+ ..+|..+.++|++||++++++++++|||||++|.+
T Consensus 76 ~~l~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~----~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~ 151 (271)
T smart00156 76 LLLFALKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYG----EEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDL 151 (271)
T ss_pred HHHHHHHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcC----HHHHHHHHHHHhhChhheEEcCeEEEEecCCCCcc
Confidence 99999999999999999999999999999999999999984 57999999999999999999999999999999999
Q ss_pred CChHHhhhccCCcccCCCccceeceeccCCCC--CcccccCcceEEeehhhhhhhcC
Q 004198 715 HSVEQIEKLERPITMDAGSIILMDLLWFVLNI--STILRSMVLYIILFSLKIFISFI 769 (769)
Q Consensus 715 ~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~--~~~~~~~~~~~~~~~~~~~~~~~ 769 (769)
.++++|+.++||.+.+.+. +++|+|||||.. ..+..+.++.+..||.+...+|+
T Consensus 152 ~~l~~i~~i~r~~~~~~~~-~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl 207 (271)
T smart00156 152 TTLDDIRKLKRPQEPPDEG-LLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFL 207 (271)
T ss_pred CCHHHHhcccCCCCCCchh-hhhheeecCCCcccCCCccCCCCCccccCHHHHHHHH
Confidence 9999999999998877655 899999999953 34455667788899999888773
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. |
| >PLN02193 nitrile-specifier protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-38 Score=354.30 Aligned_cols=304 Identities=22% Similarity=0.335 Sum_probs=245.0
Q ss_pred cceeecCCC---CCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCC
Q 004198 17 ETYWDTDED---APGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPA 93 (769)
Q Consensus 17 ~~~w~~~~~---~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~ 93 (769)
+++|..+.. +|.||.+|+++.+ +++||+|||....... ..+++|+||+.+++|+.++..
T Consensus 150 ~~~W~~~~~~~~~P~pR~~h~~~~~------~~~iyv~GG~~~~~~~------------~~~~v~~yD~~~~~W~~~~~~ 211 (470)
T PLN02193 150 LGKWIKVEQKGEGPGLRCSHGIAQV------GNKIYSFGGEFTPNQP------------IDKHLYVFDLETRTWSISPAT 211 (470)
T ss_pred hceEEEcccCCCCCCCccccEEEEE------CCEEEEECCcCCCCCC------------eeCcEEEEECCCCEEEeCCCC
Confidence 378997765 6899999999999 8999999997543221 357899999999999998887
Q ss_pred CCCCc-ccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecC
Q 004198 94 GEPPS-PRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGN 172 (769)
Q Consensus 94 g~~P~-~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~ 172 (769)
+..|. +|.+|++++++++||||||.... ..++++|+||+.+ ++|+++.+.+..|.+|++|++++.++ +|||+||.
T Consensus 212 g~~P~~~~~~~~~v~~~~~lYvfGG~~~~-~~~ndv~~yD~~t--~~W~~l~~~~~~P~~R~~h~~~~~~~-~iYv~GG~ 287 (470)
T PLN02193 212 GDVPHLSCLGVRMVSIGSTLYVFGGRDAS-RQYNGFYSFDTTT--NEWKLLTPVEEGPTPRSFHSMAADEE-NVYVFGGV 287 (470)
T ss_pred CCCCCCcccceEEEEECCEEEEECCCCCC-CCCccEEEEECCC--CEEEEcCcCCCCCCCccceEEEEECC-EEEEECCC
Confidence 76665 46799999999999999998643 4679999999999 78999965555689999999988876 89999999
Q ss_pred CCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCC
Q 004198 173 DGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAP 252 (769)
Q Consensus 173 ~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~ 252 (769)
+....++++++||+.++ +|+.++..+.+|.+|..|+++++ ++++|++||.+.. .+++++.||+.++ +|..++
T Consensus 288 ~~~~~~~~~~~yd~~t~--~W~~~~~~~~~~~~R~~~~~~~~-~gkiyviGG~~g~--~~~dv~~yD~~t~---~W~~~~ 359 (470)
T PLN02193 288 SATARLKTLDSYNIVDK--KWFHCSTPGDSFSIRGGAGLEVV-QGKVWVVYGFNGC--EVDDVHYYDPVQD---KWTQVE 359 (470)
T ss_pred CCCCCcceEEEEECCCC--EEEeCCCCCCCCCCCCCcEEEEE-CCcEEEEECCCCC--ccCceEEEECCCC---EEEEec
Confidence 88888899999999999 99999877777888998888765 7789999998643 4799999999877 666655
Q ss_pred --CCCCCcccceEEEEeCCEEEEEecccCCCC-----cccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccCc
Q 004198 253 --GVAPSPRYQHAAVFVGARLHVTGGALRGGR-----AIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLEL 325 (769)
Q Consensus 253 --~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~-----~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (769)
+..|.+|..|++++++++|||+||...... .....+++++||+.+++|+.+...+.. ...|
T Consensus 360 ~~g~~P~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~ndv~~~D~~t~~W~~~~~~~~~------------~~~P 427 (470)
T PLN02193 360 TFGVRPSERSVFASAAVGKHIVIFGGEIAMDPLAHVGPGQLTDGTFALDTETLQWERLDKFGEE------------EETP 427 (470)
T ss_pred cCCCCCCCcceeEEEEECCEEEEECCccCCccccccCccceeccEEEEEcCcCEEEEcccCCCC------------CCCC
Confidence 456889999999999999999999854211 112357899999999999998765421 1225
Q ss_pred ccccceEEE--Ee-C-CEEEEEcCcCC-CccccceEEecCCC
Q 004198 326 MRRCRHASA--SI-G-VRIYIYGGLKG-DILLDDFLVAENSP 362 (769)
Q Consensus 326 ~~R~~hs~~--~~-~-~~iyv~GG~~~-~~~~~D~~~ld~~~ 362 (769)
.+|..|+++ .+ + +.|+||||+.+ +..++|+|.|++++
T Consensus 428 ~~R~~~~~~~~~~~~~~~~~~fGG~~~~~~~~~D~~~~~~~~ 469 (470)
T PLN02193 428 SSRGWTASTTGTIDGKKGLVMHGGKAPTNDRFDDLFFYGIDS 469 (470)
T ss_pred CCCccccceeeEEcCCceEEEEcCCCCccccccceEEEecCC
Confidence 577766543 23 2 45999999975 58899999998765
|
|
| >PLN02153 epithiospecifier protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-37 Score=337.31 Aligned_cols=306 Identities=22% Similarity=0.284 Sum_probs=236.5
Q ss_pred cccceeecCCC----CCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEe
Q 004198 15 TLETYWDTDED----APGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRI 90 (769)
Q Consensus 15 ~~~~~w~~~~~----~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l 90 (769)
+.+..|.++.. +|.||.+|+++++ +++||||||....... ..+++|+||+.+++|+++
T Consensus 4 ~~~~~W~~~~~~~~~~P~pR~~h~~~~~------~~~iyv~GG~~~~~~~------------~~~~~~~yd~~~~~W~~~ 65 (341)
T PLN02153 4 TLQGGWIKVEQKGGKGPGPRCSHGIAVV------GDKLYSFGGELKPNEH------------IDKDLYVFDFNTHTWSIA 65 (341)
T ss_pred ccCCeEEEecCCCCCCCCCCCcceEEEE------CCEEEEECCccCCCCc------------eeCcEEEEECCCCEEEEc
Confidence 45667987765 7999999999999 8999999998643221 468999999999999999
Q ss_pred cCCCCCCc-ccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeec--CCCCCCccccEEEEECCcEEE
Q 004198 91 RPAGEPPS-PRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQ--GQGPGPRYGHVMDLVSQRYLV 167 (769)
Q Consensus 91 ~~~g~~P~-~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~--g~~p~~R~~hs~~~~~~~~l~ 167 (769)
++.+..|. .+.+|++++++++||+|||.... ..++++++||+.+ .+|+.+... ...|.+|.+|++++.++ +||
T Consensus 66 ~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~-~~~~~v~~yd~~t--~~W~~~~~~~~~~~p~~R~~~~~~~~~~-~iy 141 (341)
T PLN02153 66 PANGDVPRISCLGVRMVAVGTKLYIFGGRDEK-REFSDFYSYDTVK--NEWTFLTKLDEEGGPEARTFHSMASDEN-HVY 141 (341)
T ss_pred CccCCCCCCccCceEEEEECCEEEEECCCCCC-CccCcEEEEECCC--CEEEEeccCCCCCCCCCceeeEEEEECC-EEE
Confidence 88765444 35589999999999999998544 3578999999999 779988531 22388999999988876 899
Q ss_pred EEecCCCC------CccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCC-------CCcccc
Q 004198 168 SVSGNDGK------RVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDAS-------GAPLAD 234 (769)
Q Consensus 168 v~GG~~~~------~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~-------~~~l~d 234 (769)
|+||.+.. ..++++++||++++ +|+.++.++..|.+|..|++++ .++++|++||.... ...+++
T Consensus 142 v~GG~~~~~~~~~~~~~~~v~~yd~~~~--~W~~l~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~gG~~~~~~~~ 218 (341)
T PLN02153 142 VFGGVSKGGLMKTPERFRTIEAYNIADG--KWVQLPDPGENFEKRGGAGFAV-VQGKIWVVYGFATSILPGGKSDYESNA 218 (341)
T ss_pred EECCccCCCccCCCcccceEEEEECCCC--eEeeCCCCCCCCCCCCcceEEE-ECCeEEEEeccccccccCCccceecCc
Confidence 99998642 24679999999999 9999998877778899888776 57789999986421 123689
Q ss_pred eEEEecCCCCceEEEeCC--CCCCCcccceEEEEeCCEEEEEecccCCC-----CcccCCCcEEEEECCCCcEEeccCCc
Q 004198 235 AYGLLMHRNGQWEWTLAP--GVAPSPRYQHAAVFVGARLHVTGGALRGG-----RAIEGEAAVAVLDTAAGVWLDRNGLV 307 (769)
Q Consensus 235 ~~~ld~~~~~~W~W~~~~--~~~P~~R~~hs~~~~~~~i~V~GG~~~~~-----~~~~~~~~v~~yd~~t~~W~~~~~~~ 307 (769)
++.||+.++ +|.++. +..|.+|..|++++++++||||||..... ......+++++||+++++|+.+....
T Consensus 219 v~~yd~~~~---~W~~~~~~g~~P~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~n~v~~~d~~~~~W~~~~~~~ 295 (341)
T PLN02153 219 VQFFDPASG---KWTEVETTGAKPSARSVFAHAVVGKYIIIFGGEVWPDLKGHLGPGTLSNEGYALDTETLVWEKLGECG 295 (341)
T ss_pred eEEEEcCCC---cEEeccccCCCCCCcceeeeEEECCEEEEECcccCCccccccccccccccEEEEEcCccEEEeccCCC
Confidence 999999877 666664 45688999999999999999999974211 01112568999999999999987543
Q ss_pred cCCCCCCCCCCCCCccCcccccceEEEEe--CCEEEEEcCcCCC-ccccceEEecCC
Q 004198 308 TSSRTSKGHGEHDPSLELMRRCRHASASI--GVRIYIYGGLKGD-ILLDDFLVAENS 361 (769)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~R~~hs~~~~--~~~iyv~GG~~~~-~~~~D~~~ld~~ 361 (769)
.+ ..|..|+.++++.+ +++||||||.++. ..++|+|.++..
T Consensus 296 ~~-------------~~pr~~~~~~~~~v~~~~~~~~~gG~~~~~~~~~~~~~~~~~ 339 (341)
T PLN02153 296 EP-------------AMPRGWTAYTTATVYGKNGLLMHGGKLPTNERTDDLYFYAVN 339 (341)
T ss_pred CC-------------CCCCccccccccccCCcceEEEEcCcCCCCccccceEEEecc
Confidence 21 11334554555554 3489999999764 678999988654
|
|
| >KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-37 Score=300.08 Aligned_cols=297 Identities=25% Similarity=0.377 Sum_probs=245.3
Q ss_pred CCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCC----------CCC
Q 004198 27 PGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPA----------GEP 96 (769)
Q Consensus 27 P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~----------g~~ 96 (769)
-+.|.+|+++.+ +++||-|||+...+.- ... -.=|+++++..+.+|+++++. ...
T Consensus 11 GPrRVNHAavaV------G~riYSFGGYCsGedy-~~~--------~piDVH~lNa~~~RWtk~pp~~~ka~i~~~yp~V 75 (392)
T KOG4693|consen 11 GPRRVNHAAVAV------GSRIYSFGGYCSGEDY-DAK--------DPIDVHVLNAENYRWTKMPPGITKATIESPYPAV 75 (392)
T ss_pred Ccccccceeeee------cceEEecCCccccccc-ccC--------CcceeEEeeccceeEEecCcccccccccCCCCcc
Confidence 346899999999 9999999998754431 111 124899999999999999872 124
Q ss_pred CcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCC--C
Q 004198 97 PSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGND--G 174 (769)
Q Consensus 97 P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~--~ 174 (769)
|..|++|+.+.+++++|+.||.+....+-|-+|+||+++ ++|.+..+.|..|.+|.||++|++++ .+|||||+. .
T Consensus 76 PyqRYGHtvV~y~d~~yvWGGRND~egaCN~Ly~fDp~t--~~W~~p~v~G~vPgaRDGHsAcV~gn-~MyiFGGye~~a 152 (392)
T KOG4693|consen 76 PYQRYGHTVVEYQDKAYVWGGRNDDEGACNLLYEFDPET--NVWKKPEVEGFVPGARDGHSACVWGN-QMYIFGGYEEDA 152 (392)
T ss_pred chhhcCceEEEEcceEEEEcCccCcccccceeeeecccc--ccccccceeeecCCccCCceeeEECc-EEEEecChHHHH
Confidence 567999999999999999999988777889999999999 78999999999999999999999997 999999984 4
Q ss_pred CCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCC--------CcccceEEEecCCCCce
Q 004198 175 KRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASG--------APLADAYGLLMHRNGQW 246 (769)
Q Consensus 175 ~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~--------~~l~d~~~ld~~~~~~W 246 (769)
+++.+|++.+|+.+. +|..+...+.+|.-|.+|+++++ ++++|||||+.... .+-+.+..||..+. .|
T Consensus 153 ~~FS~d~h~ld~~Tm--tWr~~~Tkg~PprwRDFH~a~~~-~~~MYiFGGR~D~~gpfHs~~e~Yc~~i~~ld~~T~-aW 228 (392)
T KOG4693|consen 153 QRFSQDTHVLDFATM--TWREMHTKGDPPRWRDFHTASVI-DGMMYIFGGRSDESGPFHSIHEQYCDTIMALDLATG-AW 228 (392)
T ss_pred HhhhccceeEeccce--eeeehhccCCCchhhhhhhhhhc-cceEEEeccccccCCCccchhhhhcceeEEEecccc-cc
Confidence 668899999999998 99999999999999999999976 58999999986542 23344566777654 44
Q ss_pred EEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccCcc
Q 004198 247 EWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELM 326 (769)
Q Consensus 247 ~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (769)
.-....++.|.+|..|++-+++++||+|||+++.. ....+++|+||+.+..|..+...+.- |.
T Consensus 229 ~r~p~~~~~P~GRRSHS~fvYng~~Y~FGGYng~l--n~HfndLy~FdP~t~~W~~I~~~Gk~---------------P~ 291 (392)
T KOG4693|consen 229 TRTPENTMKPGGRRSHSTFVYNGKMYMFGGYNGTL--NVHFNDLYCFDPKTSMWSVISVRGKY---------------PS 291 (392)
T ss_pred ccCCCCCcCCCcccccceEEEcceEEEecccchhh--hhhhcceeecccccchheeeeccCCC---------------CC
Confidence 44444477899999999999999999999987654 33478999999999999999876542 66
Q ss_pred cccceEEEEeCCEEEEEcCcCC-----------C--------ccccceEEecCCC
Q 004198 327 RRCRHASASIGVRIYIYGGLKG-----------D--------ILLDDFLVAENSP 362 (769)
Q Consensus 327 ~R~~hs~~~~~~~iyv~GG~~~-----------~--------~~~~D~~~ld~~~ 362 (769)
+|.++++++.++++|+|||..- . .-++|+.+||.++
T Consensus 292 aRRRqC~~v~g~kv~LFGGTsP~~~~~~Spt~~~G~~~~~~LiD~SDLHvLDF~P 346 (392)
T KOG4693|consen 292 ARRRQCSVVSGGKVYLFGGTSPLPCHPLSPTNYNGMISPSGLIDLSDLHVLDFAP 346 (392)
T ss_pred cccceeEEEECCEEEEecCCCCCCCCCCCccccCCCCCcccccccccceeeecCh
Confidence 9999999999999999999743 0 2356777777665
|
|
| >PLN02193 nitrile-specifier protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=320.25 Aligned_cols=281 Identities=23% Similarity=0.319 Sum_probs=230.7
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCC----CcEEEecCCCCCCcccccceEEEECCEEEEECccCC
Q 004198 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLT----RKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGP 120 (769)
Q Consensus 45 ~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~----~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~ 120 (769)
+++|+.|+|.....-. .--+|.+++.+ ++|.++++.+..|.||++|+++.+++.||++||...
T Consensus 120 ~~~ivgf~G~~~~~~~-------------~ig~y~~~~~~~~~~~~W~~~~~~~~~P~pR~~h~~~~~~~~iyv~GG~~~ 186 (470)
T PLN02193 120 GGKIVGFHGRSTDVLH-------------SLGAYISLPSTPKLLGKWIKVEQKGEGPGLRCSHGIAQVGNKIYSFGGEFT 186 (470)
T ss_pred CCeEEEEeccCCCcEE-------------eeEEEEecCCChhhhceEEEcccCCCCCCCccccEEEEECCEEEEECCcCC
Confidence 8899999998643310 11245567655 799999988888999999999999999999999753
Q ss_pred -CCCCcCcEEEEEccCCcceEEEeeecCCCCC-CccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCC
Q 004198 121 -AGHSTDDLYVLDLTNDKFKWHRVVVQGQGPG-PRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNP 198 (769)
Q Consensus 121 -~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~-~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~ 198 (769)
.....+++|+||+.+ .+|+.++..+..|. +|.+|+++++++ .||||||.+....++++|+||+.++ +|+++.+
T Consensus 187 ~~~~~~~~v~~yD~~~--~~W~~~~~~g~~P~~~~~~~~~v~~~~-~lYvfGG~~~~~~~ndv~~yD~~t~--~W~~l~~ 261 (470)
T PLN02193 187 PNQPIDKHLYVFDLET--RTWSISPATGDVPHLSCLGVRMVSIGS-TLYVFGGRDASRQYNGFYSFDTTTN--EWKLLTP 261 (470)
T ss_pred CCCCeeCcEEEEECCC--CEEEeCCCCCCCCCCcccceEEEEECC-EEEEECCCCCCCCCccEEEEECCCC--EEEEcCc
Confidence 333457899999999 77998876666665 467899988887 9999999988778999999999999 9999988
Q ss_pred CCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCC--CCCCCcccceEEEEeCCEEEEEec
Q 004198 199 EGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAP--GVAPSPRYQHAAVFVGARLHVTGG 276 (769)
Q Consensus 199 ~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~--~~~P~~R~~hs~~~~~~~i~V~GG 276 (769)
++..|.+|..|++++ .+++||||||.+.. ..+++++.||+.++ +|..++ +.+|.+|.+|++++++++|||+||
T Consensus 262 ~~~~P~~R~~h~~~~-~~~~iYv~GG~~~~-~~~~~~~~yd~~t~---~W~~~~~~~~~~~~R~~~~~~~~~gkiyviGG 336 (470)
T PLN02193 262 VEEGPTPRSFHSMAA-DEENVYVFGGVSAT-ARLKTLDSYNIVDK---KWFHCSTPGDSFSIRGGAGLEVVQGKVWVVYG 336 (470)
T ss_pred CCCCCCCccceEEEE-ECCEEEEECCCCCC-CCcceEEEEECCCC---EEEeCCCCCCCCCCCCCcEEEEECCcEEEEEC
Confidence 877789999998876 47799999998754 35789999999876 666654 345788999999999999999999
Q ss_pred ccCCCCcccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccCcccccceEEEEeCCEEEEEcCcCC--------
Q 004198 277 ALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKG-------- 348 (769)
Q Consensus 277 ~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~~~~iyv~GG~~~-------- 348 (769)
..+. ..+++++||+.+++|+.+...+.. |.+|..|++++++++||||||...
T Consensus 337 ~~g~-----~~~dv~~yD~~t~~W~~~~~~g~~---------------P~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 396 (470)
T PLN02193 337 FNGC-----EVDDVHYYDPVQDKWTQVETFGVR---------------PSERSVFASAAVGKHIVIFGGEIAMDPLAHVG 396 (470)
T ss_pred CCCC-----ccCceEEEECCCCEEEEeccCCCC---------------CCCcceeEEEEECCEEEEECCccCCccccccC
Confidence 7532 257899999999999998765332 458999999999999999999753
Q ss_pred -CccccceEEecCCCCccccC
Q 004198 349 -DILLDDFLVAENSPFQSDVN 368 (769)
Q Consensus 349 -~~~~~D~~~ld~~~~~~~~~ 368 (769)
...++|+|+||..+.+|...
T Consensus 397 ~~~~~ndv~~~D~~t~~W~~~ 417 (470)
T PLN02193 397 PGQLTDGTFALDTETLQWERL 417 (470)
T ss_pred ccceeccEEEEEcCcCEEEEc
Confidence 24678999999999888754
|
|
| >KOG4152 consensus Host cell transcription factor HCFC1 [Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=309.53 Aligned_cols=302 Identities=26% Similarity=0.460 Sum_probs=256.3
Q ss_pred CCCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCccccc
Q 004198 23 DEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAA 102 (769)
Q Consensus 23 ~~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P~~R~~ 102 (769)
.++.|-||.||-++++ ...|++|||-++ + +..+++.||..+++|..-...|+.|.+.++
T Consensus 26 tGPvPrpRHGHRAVai------kELiviFGGGNE--G-------------iiDELHvYNTatnqWf~PavrGDiPpgcAA 84 (830)
T KOG4152|consen 26 TGPVPRPRHGHRAVAI------KELIVIFGGGNE--G-------------IIDELHVYNTATNQWFAPAVRGDIPPGCAA 84 (830)
T ss_pred cCCCCCccccchheee------eeeEEEecCCcc--c-------------chhhhhhhccccceeecchhcCCCCCchhh
Confidence 4678999999999999 889999999653 2 678999999999999999899999999999
Q ss_pred ceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeee----cCCCCCCccccEEEEECCcEEEEEecCC-----
Q 004198 103 HAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVV----QGQGPGPRYGHVMDLVSQRYLVSVSGND----- 173 (769)
Q Consensus 103 hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~----~g~~p~~R~~hs~~~~~~~~l~v~GG~~----- 173 (769)
|+.++.+++||+|||+-+-+.++||+|.+.... |.|.++.+ .|.+|.||.||+..++++ +.|+|||..
T Consensus 85 ~GfvcdGtrilvFGGMvEYGkYsNdLYELQasR--WeWkrlkp~~p~nG~pPCPRlGHSFsl~gn-KcYlFGGLaNdseD 161 (830)
T KOG4152|consen 85 FGFVCDGTRILVFGGMVEYGKYSNDLYELQASR--WEWKRLKPKTPKNGPPPCPRLGHSFSLVGN-KCYLFGGLANDSED 161 (830)
T ss_pred cceEecCceEEEEccEeeeccccchHHHhhhhh--hhHhhcCCCCCCCCCCCCCccCceeEEecc-EeEEeccccccccC
Confidence 999999999999999989999999999888777 99999854 578999999999988886 999999952
Q ss_pred ----CCCccCceeEEeCC--CCCceEEEcCCCCCCCCcccccEEEEec-----CCEEEEEcccCCCCCcccceEEEecCC
Q 004198 174 ----GKRVLSDAWALDTA--QKPYVWQRLNPEGDRPSARMYATASARS-----DGMFLLCGGRDASGAPLADAYGLLMHR 242 (769)
Q Consensus 174 ----~~~~~~dv~~~d~~--~~~~~W~~v~~~~~~P~~r~~hsa~~~~-----~g~l~v~GG~~~~~~~l~d~~~ld~~~ 242 (769)
-.+++||+|++++. .....|...-..+..|.+|-.|+++++. ..+|||+||.++ ..+.|+|.+|.++
T Consensus 162 pknNvPrYLnDlY~leL~~Gsgvv~W~ip~t~Gv~P~pRESHTAViY~eKDs~~skmvvyGGM~G--~RLgDLW~Ldl~T 239 (830)
T KOG4152|consen 162 PKNNVPRYLNDLYILELRPGSGVVAWDIPITYGVLPPPRESHTAVIYTEKDSKKSKMVVYGGMSG--CRLGDLWTLDLDT 239 (830)
T ss_pred cccccchhhcceEEEEeccCCceEEEecccccCCCCCCcccceeEEEEeccCCcceEEEEccccc--ccccceeEEecce
Confidence 23489999999886 3446799998889999999999999872 238999999875 5799999999985
Q ss_pred CCceEEEeCCCCCCCcccceEEEEeCCEEEEEecccC---CC-------CcccCCCcEEEEECCCCcEEeccCCccCCCC
Q 004198 243 NGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALR---GG-------RAIEGEAAVAVLDTAAGVWLDRNGLVTSSRT 312 (769)
Q Consensus 243 ~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~---~~-------~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~ 312 (769)
- +|...+..+..|.||.-|+++.++++||||||.-- .. ..-...+++-++|+++..|..+-....
T Consensus 240 l-~W~kp~~~G~~PlPRSLHsa~~IGnKMyvfGGWVPl~~~~~~~~~hekEWkCTssl~clNldt~~W~tl~~d~~---- 314 (830)
T KOG4152|consen 240 L-TWNKPSLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTSSLACLNLDTMAWETLLMDTL---- 314 (830)
T ss_pred e-ecccccccCCCCCCcccccceeecceeEEecceeeeeccccccccccceeeeccceeeeeecchheeeeeeccc----
Confidence 4 66666667999999999999999999999999731 00 111236788999999999998865532
Q ss_pred CCCCCCCCCccCcccccceEEEEeCCEEEEEcCcCC-------CccccceEEecCCC
Q 004198 313 SKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKG-------DILLDDFLVAENSP 362 (769)
Q Consensus 313 ~~~~~~~~~~~~~~~R~~hs~~~~~~~iyv~GG~~~-------~~~~~D~~~ld~~~ 362 (769)
....+|.+|.+||+++++.+|||--|.+| ...+.|+|.||++.
T Consensus 315 -------ed~tiPR~RAGHCAvAigtRlYiWSGRDGYrKAwnnQVCCkDlWyLdTek 364 (830)
T KOG4152|consen 315 -------EDNTIPRARAGHCAVAIGTRLYIWSGRDGYRKAWNNQVCCKDLWYLDTEK 364 (830)
T ss_pred -------cccccccccccceeEEeccEEEEEeccchhhHhhccccchhhhhhhcccC
Confidence 23347899999999999999999999876 47789999999765
|
|
| >KOG1230 consensus Protein containing repeated kelch motifs [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=299.12 Aligned_cols=325 Identities=26% Similarity=0.420 Sum_probs=257.1
Q ss_pred eeecCCCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCc
Q 004198 19 YWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPS 98 (769)
Q Consensus 19 ~w~~~~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P~ 98 (769)
.-+...+.|.||.+.++++-+. .+-|+||||....+. +..+++|+|+||+.++.|+++... ++|.
T Consensus 56 ~~e~~~~~PspRsn~sl~~nPe----keELilfGGEf~ngq----------kT~vYndLy~Yn~k~~eWkk~~sp-n~P~ 120 (521)
T KOG1230|consen 56 VVETSVPPPSPRSNPSLFANPE----KEELILFGGEFYNGQ----------KTHVYNDLYSYNTKKNEWKKVVSP-NAPP 120 (521)
T ss_pred eeeccCCCCCCCCCcceeeccC----cceeEEecceeecce----------eEEEeeeeeEEeccccceeEeccC-CCcC
Confidence 3445556789999999999876 458999999765533 345899999999999999999755 5788
Q ss_pred ccccceEEEEC-CEEEEECcc--CCCC---CCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecC
Q 004198 99 PRAAHAAAAVG-TMVVFQGGI--GPAG---HSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGN 172 (769)
Q Consensus 99 ~R~~hs~~~~~-~~Iyv~GG~--~~~~---~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~ 172 (769)
||++|.++++. |.+|+|||. ++.+ ....|+|+||+.+ .+|+++...| .|.+|+||.|+++.. .|++|||.
T Consensus 121 pRsshq~va~~s~~l~~fGGEfaSPnq~qF~HYkD~W~fd~~t--rkweql~~~g-~PS~RSGHRMvawK~-~lilFGGF 196 (521)
T KOG1230|consen 121 PRSSHQAVAVPSNILWLFGGEFASPNQEQFHHYKDLWLFDLKT--RKWEQLEFGG-GPSPRSGHRMVAWKR-QLILFGGF 196 (521)
T ss_pred CCccceeEEeccCeEEEeccccCCcchhhhhhhhheeeeeecc--chheeeccCC-CCCCCccceeEEeee-eEEEEcce
Confidence 99999999986 799999994 2333 3468999999999 7799998744 899999999999997 99999997
Q ss_pred CC----CCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCC--------CCCcccceEEEec
Q 004198 173 DG----KRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDA--------SGAPLADAYGLLM 240 (769)
Q Consensus 173 ~~----~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~--------~~~~l~d~~~ld~ 240 (769)
.. ..++||||+||+++= +|+++.+.+..|.+|.+|++.+.++|.|||.||++. .+...+|+|.|+.
T Consensus 197 hd~nr~y~YyNDvy~FdLdty--kW~Klepsga~PtpRSGcq~~vtpqg~i~vyGGYsK~~~kK~~dKG~~hsDmf~L~p 274 (521)
T KOG1230|consen 197 HDSNRDYIYYNDVYAFDLDTY--KWSKLEPSGAGPTPRSGCQFSVTPQGGIVVYGGYSKQRVKKDVDKGTRHSDMFLLKP 274 (521)
T ss_pred ecCCCceEEeeeeEEEeccce--eeeeccCCCCCCCCCCcceEEecCCCcEEEEcchhHhhhhhhhhcCceeeeeeeecC
Confidence 43 347999999999874 999999988899999999999999999999999853 2567999999998
Q ss_pred CC--CCceEEEeCC--CCCCCcccceEEEEe-CCEEEEEecccCCCC-----cccCCCcEEEEECCCCcEEeccCCccCC
Q 004198 241 HR--NGQWEWTLAP--GVAPSPRYQHAAVFV-GARLHVTGGALRGGR-----AIEGEAAVAVLDTAAGVWLDRNGLVTSS 310 (769)
Q Consensus 241 ~~--~~~W~W~~~~--~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~-----~~~~~~~v~~yd~~t~~W~~~~~~~~~~ 310 (769)
.. ...|.|.++. +..|.||.+.++++. +++-+.|||..+-.. .....++++.||...+.|..........
T Consensus 275 ~~~~~dKw~W~kvkp~g~kPspRsgfsv~va~n~kal~FGGV~D~eeeeEsl~g~F~NDLy~fdlt~nrW~~~qlq~~~S 354 (521)
T KOG1230|consen 275 EDGREDKWVWTKVKPSGVKPSPRSGFSVAVAKNHKALFFGGVCDLEEEEESLSGEFFNDLYFFDLTRNRWSEGQLQGKKS 354 (521)
T ss_pred CcCCCcceeEeeccCCCCCCCCCCceeEEEecCCceEEecceecccccchhhhhhhhhhhhheecccchhhHhhhccCCC
Confidence 76 4589999886 788999999999998 569999999865110 1123789999999999999775443322
Q ss_pred CC--CC---------------CCC---------------------------------------------CCCCccCcccc
Q 004198 311 RT--SK---------------GHG---------------------------------------------EHDPSLELMRR 328 (769)
Q Consensus 311 ~~--~~---------------~~~---------------------------------------------~~~~~~~~~~R 328 (769)
.. .+ +.. +..+...+.+|
T Consensus 355 ~~~~~r~~~Kd~~k~~~~~~~G~~tkd~e~~~v~k~v~~~~d~l~i~v~v~~~g~~~~p~s~~e~s~~~~~e~~~~~~pr 434 (521)
T KOG1230|consen 355 PATSRRRSRKDQEKELQRPTVGPNTKDLEVQAVDKAVCPTTDSLFIYVGVWEPGEADYPESEDEASREGDREPDEGEFPR 434 (521)
T ss_pred CccccccccccccccccCcccCCCcccccceecceeeeecCCceEEEeecCCCCCCCCcccccccccccCCCCCCCCCcc
Confidence 20 00 000 11123447788
Q ss_pred cceEEEEeCCEEEEEcCcCC----CccccceEEecCCCCc
Q 004198 329 CRHASASIGVRIYIYGGLKG----DILLDDFLVAENSPFQ 364 (769)
Q Consensus 329 ~~hs~~~~~~~iyv~GG~~~----~~~~~D~~~ld~~~~~ 364 (769)
...-.++..+.+||+||.-+ ...+.|+|.|++...+
T Consensus 435 ~d~~~~v~~G~~~i~gGi~ee~d~q~tl~dfyal~~hr~~ 474 (521)
T KOG1230|consen 435 MDDELSVKVGVLYIGGGIFEERDWQPTLRDFYALDLHRNE 474 (521)
T ss_pred CCCccCcccceEEecCCCcccccccchHHHHhhhhhhhhh
Confidence 88888888889999999643 3568999988888766
|
|
| >KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-33 Score=319.27 Aligned_cols=271 Identities=20% Similarity=0.309 Sum_probs=241.0
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCC
Q 004198 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHS 124 (769)
Q Consensus 45 ~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~ 124 (769)
.+.||++||...... ..+.+.+||+.++.|..+..+ |.+|..+++++++++||++||.+.+...
T Consensus 284 ~~~l~~vGG~~~~~~-------------~~~~ve~yd~~~~~w~~~a~m---~~~r~~~~~~~~~~~lYv~GG~~~~~~~ 347 (571)
T KOG4441|consen 284 SGKLVAVGGYNRQGQ-------------SLRSVECYDPKTNEWSSLAPM---PSPRCRVGVAVLNGKLYVVGGYDSGSDR 347 (571)
T ss_pred CCeEEEECCCCCCCc-------------ccceeEEecCCcCcEeecCCC---CcccccccEEEECCEEEEEccccCCCcc
Confidence 678999999986222 578999999999999999876 7999999999999999999998756678
Q ss_pred cCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCC
Q 004198 125 TDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPS 204 (769)
Q Consensus 125 ~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~ 204 (769)
++++|+||+.+ ++|..+ .+|+.+|.+++++++++ .||++||.++...++.+++||+.++ +|+.+.++ +.
T Consensus 348 l~~ve~YD~~~--~~W~~~---a~M~~~R~~~~v~~l~g-~iYavGG~dg~~~l~svE~YDp~~~--~W~~va~m---~~ 416 (571)
T KOG4441|consen 348 LSSVERYDPRT--NQWTPV---APMNTKRSDFGVAVLDG-KLYAVGGFDGEKSLNSVECYDPVTN--KWTPVAPM---LT 416 (571)
T ss_pred cceEEEecCCC--Cceecc---CCccCccccceeEEECC-EEEEEeccccccccccEEEecCCCC--cccccCCC---Cc
Confidence 89999999999 669998 59999999999999997 9999999999999999999999999 99999887 56
Q ss_pred cccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcc
Q 004198 205 ARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAI 284 (769)
Q Consensus 205 ~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~ 284 (769)
+|..|+++ ..+|+||++||.+.....++.+..||+.++ +|...+.+ +.+|.+|++++++++||++||.++..
T Consensus 417 ~r~~~gv~-~~~g~iYi~GG~~~~~~~l~sve~YDP~t~---~W~~~~~M-~~~R~~~g~a~~~~~iYvvGG~~~~~--- 488 (571)
T KOG4441|consen 417 RRSGHGVA-VLGGKLYIIGGGDGSSNCLNSVECYDPETN---TWTLIAPM-NTRRSGFGVAVLNGKIYVVGGFDGTS--- 488 (571)
T ss_pred ceeeeEEE-EECCEEEEEcCcCCCccccceEEEEcCCCC---ceeecCCc-ccccccceEEEECCEEEEECCccCCC---
Confidence 66666655 468899999999888768999999999999 99999887 69999999999999999999988732
Q ss_pred cCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccCcccccceEEEEeCCEEEEEcCcCCCccccceEEecCCCCc
Q 004198 285 EGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLDDFLVAENSPFQ 364 (769)
Q Consensus 285 ~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~~~~iyv~GG~~~~~~~~D~~~ld~~~~~ 364 (769)
....+++||+.+++|+.+..+.. +|..+++++++++||+.||+++...++.+..+|-.+-+
T Consensus 489 -~~~~VE~ydp~~~~W~~v~~m~~------------------~rs~~g~~~~~~~ly~vGG~~~~~~l~~ve~ydp~~d~ 549 (571)
T KOG4441|consen 489 -ALSSVERYDPETNQWTMVAPMTS------------------PRSAVGVVVLGGKLYAVGGFDGNNNLNTVECYDPETDT 549 (571)
T ss_pred -ccceEEEEcCCCCceeEcccCcc------------------ccccccEEEECCEEEEEecccCccccceeEEcCCCCCc
Confidence 25669999999999999988855 99999999999999999999999999999999877777
Q ss_pred cccCC
Q 004198 365 SDVNS 369 (769)
Q Consensus 365 ~~~~~ 369 (769)
|....
T Consensus 550 W~~~~ 554 (571)
T KOG4441|consen 550 WTEVT 554 (571)
T ss_pred eeeCC
Confidence 66433
|
|
| >KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=316.39 Aligned_cols=257 Identities=23% Similarity=0.387 Sum_probs=229.3
Q ss_pred CCCCCCCCcccccceeecCCCCCCCccccEEEEecccCCCCCEEEEEcCCCC-CCCCCCCCCCCccccccCCcEEEEECC
Q 004198 5 PWLHPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATA-IEGGATSSAPGIRLAGVTNSVHLYDVL 83 (769)
Q Consensus 5 ~~~~~~~~y~~~~~~w~~~~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~-~~~~~~~~~~~~~~~~~~~dv~~yD~~ 83 (769)
.......+||+.++.|...+++|.+|..++++++ +++||++||.+. .. ..+.+++||+.
T Consensus 298 ~~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~------~~~lYv~GG~~~~~~--------------~l~~ve~YD~~ 357 (571)
T KOG4441|consen 298 QSLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVL------NGKLYVVGGYDSGSD--------------RLSSVERYDPR 357 (571)
T ss_pred cccceeEEecCCcCcEeecCCCCcccccccEEEE------CCEEEEEccccCCCc--------------ccceEEEecCC
Confidence 3456678999999999999999999999999999 999999999984 22 57899999999
Q ss_pred CCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECC
Q 004198 84 TRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQ 163 (769)
Q Consensus 84 ~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~ 163 (769)
+++|+.++++ +.+|..|+++++++.||++||.+ +...++++++||+.+ ++|+.+ ++++.+|++|+++++++
T Consensus 358 ~~~W~~~a~M---~~~R~~~~v~~l~g~iYavGG~d-g~~~l~svE~YDp~~--~~W~~v---a~m~~~r~~~gv~~~~g 428 (571)
T KOG4441|consen 358 TNQWTPVAPM---NTKRSDFGVAVLDGKLYAVGGFD-GEKSLNSVECYDPVT--NKWTPV---APMLTRRSGHGVAVLGG 428 (571)
T ss_pred CCceeccCCc---cCccccceeEEECCEEEEEeccc-cccccccEEEecCCC--Cccccc---CCCCcceeeeEEEEECC
Confidence 9999998876 68999999999999999999986 556788999999999 779999 68999999999999987
Q ss_pred cEEEEEecCCCCC-ccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCC
Q 004198 164 RYLVSVSGNDGKR-VLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHR 242 (769)
Q Consensus 164 ~~l~v~GG~~~~~-~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~ 242 (769)
+||++||.++.. .++.|.+||+.++ +|+.++++ +.+|.+|.++ ..++.||++||.+. ...+..+.+||+.+
T Consensus 429 -~iYi~GG~~~~~~~l~sve~YDP~t~--~W~~~~~M---~~~R~~~g~a-~~~~~iYvvGG~~~-~~~~~~VE~ydp~~ 500 (571)
T KOG4441|consen 429 -KLYIIGGGDGSSNCLNSVECYDPETN--TWTLIAPM---NTRRSGFGVA-VLNGKIYVVGGFDG-TSALSSVERYDPET 500 (571)
T ss_pred -EEEEEcCcCCCccccceEEEEcCCCC--ceeecCCc---ccccccceEE-EECCEEEEECCccC-CCccceEEEEcCCC
Confidence 999999998887 9999999999999 99999988 6778877755 46889999999988 44577799999999
Q ss_pred CCceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccCC
Q 004198 243 NGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGL 306 (769)
Q Consensus 243 ~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~ 306 (769)
+ +|+.++.+ +.+|..++++.+++++|++||..+... ++.+.+||+++++|+....+
T Consensus 501 ~---~W~~v~~m-~~~rs~~g~~~~~~~ly~vGG~~~~~~----l~~ve~ydp~~d~W~~~~~~ 556 (571)
T KOG4441|consen 501 N---QWTMVAPM-TSPRSAVGVVVLGGKLYAVGGFDGNNN----LNTVECYDPETDTWTEVTEP 556 (571)
T ss_pred C---ceeEcccC-ccccccccEEEECCEEEEEecccCccc----cceeEEcCCCCCceeeCCCc
Confidence 8 89998655 699999999999999999999765543 78999999999999999883
|
|
| >TIGR03547 muta_rot_YjhT mutatrotase, YjhT family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-31 Score=294.60 Aligned_cols=279 Identities=22% Similarity=0.290 Sum_probs=212.9
Q ss_pred CCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEEC--CCCcEEEecCCCCCC-ccc
Q 004198 24 EDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDV--LTRKWTRIRPAGEPP-SPR 100 (769)
Q Consensus 24 ~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~--~~~~W~~l~~~g~~P-~~R 100 (769)
+++|.||..++++++ +++|||+||.. .+++++||+ .+++|++++++ | .+|
T Consensus 2 ~~lp~~~~~~~~~~~------~~~vyv~GG~~------------------~~~~~~~d~~~~~~~W~~l~~~---p~~~R 54 (346)
T TIGR03547 2 PDLPVGFKNGTGAII------GDKVYVGLGSA------------------GTSWYKLDLKKPSKGWQKIADF---PGGPR 54 (346)
T ss_pred CCCCccccCceEEEE------CCEEEEEcccc------------------CCeeEEEECCCCCCCceECCCC---CCCCc
Confidence 578999999998888 89999999952 256899997 57889999865 5 589
Q ss_pred ccceEEEECCEEEEECccCCCC-----CCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCC
Q 004198 101 AAHAAAAVGTMVVFQGGIGPAG-----HSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGK 175 (769)
Q Consensus 101 ~~hs~~~~~~~Iyv~GG~~~~~-----~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~ 175 (769)
..|++++++++|||+||..... ..++++|+||+.+ .+|+++. ..+|.+|.+|+++...+++||++||.+..
T Consensus 55 ~~~~~~~~~~~iYv~GG~~~~~~~~~~~~~~~v~~Yd~~~--~~W~~~~--~~~p~~~~~~~~~~~~~g~IYviGG~~~~ 130 (346)
T TIGR03547 55 NQAVAAAIDGKLYVFGGIGKANSEGSPQVFDDVYRYDPKK--NSWQKLD--TRSPVGLLGASGFSLHNGQAYFTGGVNKN 130 (346)
T ss_pred ccceEEEECCEEEEEeCCCCCCCCCcceecccEEEEECCC--CEEecCC--CCCCCcccceeEEEEeCCEEEEEcCcChH
Confidence 9999999999999999975322 2468999999999 7799995 25677888888774444599999998642
Q ss_pred C----------------------------------ccCceeEEeCCCCCceEEEcCCCCCCCC-cccccEEEEecCCEEE
Q 004198 176 R----------------------------------VLSDAWALDTAQKPYVWQRLNPEGDRPS-ARMYATASARSDGMFL 220 (769)
Q Consensus 176 ~----------------------------------~~~dv~~~d~~~~~~~W~~v~~~~~~P~-~r~~hsa~~~~~g~l~ 220 (769)
. .++++++||+.++ +|+.+.++ |. +|..|+++ ..+++||
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~YDp~t~--~W~~~~~~---p~~~r~~~~~~-~~~~~iy 204 (346)
T TIGR03547 131 IFDGYFADLSAADKDSEPKDKLIAAYFSQPPEDYFWNKNVLSYDPSTN--QWRNLGEN---PFLGTAGSAIV-HKGNKLL 204 (346)
T ss_pred HHHHHHhhHhhcCccchhhhhhHHHHhCCChhHcCccceEEEEECCCC--ceeECccC---CCCcCCCceEE-EECCEEE
Confidence 1 2478999999999 99999766 54 45555444 5688999
Q ss_pred EEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcc-------cceEEEEeCCEEEEEecccCCCCc----------
Q 004198 221 LCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPR-------YQHAAVFVGARLHVTGGALRGGRA---------- 283 (769)
Q Consensus 221 v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R-------~~hs~~~~~~~i~V~GG~~~~~~~---------- 283 (769)
|+||....+....+++.|+... .+.+|...+.+ |.+| .+|++++++++|||+||.......
T Consensus 205 v~GG~~~~~~~~~~~~~y~~~~-~~~~W~~~~~m-~~~r~~~~~~~~~~~a~~~~~~Iyv~GG~~~~~~~~~~~~~~~~~ 282 (346)
T TIGR03547 205 LINGEIKPGLRTAEVKQYLFTG-GKLEWNKLPPL-PPPKSSSQEGLAGAFAGISNGVLLVAGGANFPGAQENYKNGKLYA 282 (346)
T ss_pred EEeeeeCCCccchheEEEEecC-CCceeeecCCC-CCCCCCccccccEEeeeEECCEEEEeecCCCCCchhhhhcCCccc
Confidence 9999865544446677666531 12378777765 3443 467788899999999997632110
Q ss_pred ---ccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccCcccccceEEEEeCCEEEEEcCcCC-CccccceEEec
Q 004198 284 ---IEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKG-DILLDDFLVAE 359 (769)
Q Consensus 284 ---~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~~~~iyv~GG~~~-~~~~~D~~~ld 359 (769)
......+++||+++++|+.+..++. +|..+++++++++|||+||.+. ...++|++.+-
T Consensus 283 ~~~~~~~~~~e~yd~~~~~W~~~~~lp~------------------~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~~ 344 (346)
T TIGR03547 283 HEGLIKAWSSEVYALDNGKWSKVGKLPQ------------------GLAYGVSVSWNNGVLLIGGENSGGKAVTDVYLLS 344 (346)
T ss_pred cCCCCceeEeeEEEecCCcccccCCCCC------------------CceeeEEEEcCCEEEEEeccCCCCCEeeeEEEEE
Confidence 0012468999999999999988754 8888999999999999999875 46788887653
|
Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein. |
| >KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=270.03 Aligned_cols=241 Identities=23% Similarity=0.383 Sum_probs=210.8
Q ss_pred CcccccceeecCCC-------------CCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEE
Q 004198 12 SYRTLETYWDTDED-------------APGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVH 78 (769)
Q Consensus 12 ~y~~~~~~w~~~~~-------------~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~ 78 (769)
.+|..+-.|.+.++ .|..|+||+.+.+ .+++||+||++.+++ +.+-+|
T Consensus 48 ~lNa~~~RWtk~pp~~~ka~i~~~yp~VPyqRYGHtvV~y------~d~~yvWGGRND~eg-------------aCN~Ly 108 (392)
T KOG4693|consen 48 VLNAENYRWTKMPPGITKATIESPYPAVPYQRYGHTVVEY------QDKAYVWGGRNDDEG-------------ACNLLY 108 (392)
T ss_pred EeeccceeEEecCcccccccccCCCCccchhhcCceEEEE------cceEEEEcCccCccc-------------ccceee
Confidence 34555666765544 4567999999999 999999999998776 679999
Q ss_pred EEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccC-CCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccE
Q 004198 79 LYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIG-PAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHV 157 (769)
Q Consensus 79 ~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~-~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs 157 (769)
+||+++++|.+....|-.|.+|-+|++|++++..|||||.. .....++|+++||+.| ++|..+.+.|.+|.=|.-|+
T Consensus 109 ~fDp~t~~W~~p~v~G~vPgaRDGHsAcV~gn~MyiFGGye~~a~~FS~d~h~ld~~T--mtWr~~~Tkg~PprwRDFH~ 186 (392)
T KOG4693|consen 109 EFDPETNVWKKPEVEGFVPGARDGHSACVWGNQMYIFGGYEEDAQRFSQDTHVLDFAT--MTWREMHTKGDPPRWRDFHT 186 (392)
T ss_pred eeccccccccccceeeecCCccCCceeeEECcEEEEecChHHHHHhhhccceeEeccc--eeeeehhccCCCchhhhhhh
Confidence 99999999999999999999999999999999999999964 4456779999999999 88999999999999999999
Q ss_pred EEEECCcEEEEEecCCCC---------CccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCC
Q 004198 158 MDLVSQRYLVSVSGNDGK---------RVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDAS 228 (769)
Q Consensus 158 ~~~~~~~~l~v~GG~~~~---------~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~ 228 (769)
++++++ .+|||||.... .+.+.+-.+|+.++ .|....+.+..|..|+.|++.+ .|++||+|||+++.
T Consensus 187 a~~~~~-~MYiFGGR~D~~gpfHs~~e~Yc~~i~~ld~~T~--aW~r~p~~~~~P~GRRSHS~fv-Yng~~Y~FGGYng~ 262 (392)
T KOG4693|consen 187 ASVIDG-MMYIFGGRSDESGPFHSIHEQYCDTIMALDLATG--AWTRTPENTMKPGGRRSHSTFV-YNGKMYMFGGYNGT 262 (392)
T ss_pred hhhccc-eEEEeccccccCCCccchhhhhcceeEEEecccc--ccccCCCCCcCCCcccccceEE-EcceEEEecccchh
Confidence 999985 99999998532 24566778999999 9999988888899999999986 58899999999875
Q ss_pred C-CcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEEEeccc
Q 004198 229 G-APLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGAL 278 (769)
Q Consensus 229 ~-~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~ 278 (769)
- .-++|+|.||+.+. .|..+.+.+..|++|..+++++.+++||+|||..
T Consensus 263 ln~HfndLy~FdP~t~-~W~~I~~~Gk~P~aRRRqC~~v~g~kv~LFGGTs 312 (392)
T KOG4693|consen 263 LNVHFNDLYCFDPKTS-MWSVISVRGKYPSARRRQCSVVSGGKVYLFGGTS 312 (392)
T ss_pred hhhhhcceeecccccc-hheeeeccCCCCCcccceeEEEECCEEEEecCCC
Confidence 3 34899999999854 7888888899999999999999999999999975
|
|
| >KOG0379 consensus Kelch repeat-containing proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-31 Score=303.81 Aligned_cols=297 Identities=29% Similarity=0.445 Sum_probs=246.3
Q ss_pred CCCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCccccc
Q 004198 23 DEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAA 102 (769)
Q Consensus 23 ~~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P~~R~~ 102 (769)
....|.+|.+|+++.+ ++++|+|||....... ...++|+||..+..|.+....|..|.+|++
T Consensus 54 ~~~~p~~R~~hs~~~~------~~~~~vfGG~~~~~~~------------~~~dl~~~d~~~~~w~~~~~~g~~p~~r~g 115 (482)
T KOG0379|consen 54 LGVGPIPRAGHSAVLI------GNKLYVFGGYGSGDRL------------TDLDLYVLDLESQLWTKPAATGDEPSPRYG 115 (482)
T ss_pred CCCCcchhhccceeEE------CCEEEEECCCCCCCcc------------ccceeEEeecCCcccccccccCCCCCcccc
Confidence 3557899999999999 8999999998765542 111799999999999999999999999999
Q ss_pred ceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCC-ccCce
Q 004198 103 HAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKR-VLSDA 181 (769)
Q Consensus 103 hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~-~~~dv 181 (769)
|++++++++||+|||........++++.||+.+ .+|..+.+.+.+|.+|.+|+++++++ ++|||||.+... .+||+
T Consensus 116 ~~~~~~~~~l~lfGG~~~~~~~~~~l~~~d~~t--~~W~~l~~~~~~P~~r~~Hs~~~~g~-~l~vfGG~~~~~~~~ndl 192 (482)
T KOG0379|consen 116 HSLSAVGDKLYLFGGTDKKYRNLNELHSLDLST--RTWSLLSPTGDPPPPRAGHSATVVGT-KLVVFGGIGGTGDSLNDL 192 (482)
T ss_pred eeEEEECCeEEEEccccCCCCChhheEeccCCC--CcEEEecCcCCCCCCcccceEEEECC-EEEEECCccCcccceeee
Confidence 999999999999999876566689999999999 77999999999999999999999995 999999998776 89999
Q ss_pred eEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCC--CCCCCcc
Q 004198 182 WALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAP--GVAPSPR 259 (769)
Q Consensus 182 ~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~--~~~P~~R 259 (769)
|+||+++. +|.++...+..|.||.+|+++++.+ +++++||.+.....++|+|.||+.+ |+|.... +..|.+|
T Consensus 193 ~i~d~~~~--~W~~~~~~g~~P~pR~gH~~~~~~~-~~~v~gG~~~~~~~l~D~~~ldl~~---~~W~~~~~~g~~p~~R 266 (482)
T KOG0379|consen 193 HIYDLETS--TWSELDTQGEAPSPRYGHAMVVVGN-KLLVFGGGDDGDVYLNDVHILDLST---WEWKLLPTGGDLPSPR 266 (482)
T ss_pred eeeccccc--cceecccCCCCCCCCCCceEEEECC-eEEEEeccccCCceecceEeeeccc---ceeeeccccCCCCCCc
Confidence 99999999 8999999999999999999998766 5666666555557899999999985 6887665 7889999
Q ss_pred cceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccCcccccceEEEEeCC-
Q 004198 260 YQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGV- 338 (769)
Q Consensus 260 ~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~~~- 338 (769)
+.|++++.+.+++++||..... ...+.++|.||.++..|..+..... ..+.+|..|+.+....
T Consensus 267 ~~h~~~~~~~~~~l~gG~~~~~--~~~l~~~~~l~~~~~~w~~~~~~~~--------------~~~~~~~~~~~~~~~~~ 330 (482)
T KOG0379|consen 267 SGHSLTVSGDHLLLFGGGTDPK--QEPLGDLYGLDLETLVWSKVESVGV--------------VRPSPRLGHAAELIDEL 330 (482)
T ss_pred ceeeeEEECCEEEEEcCCcccc--cccccccccccccccceeeeecccc--------------ccccccccccceeeccC
Confidence 9999999999999999976541 1237889999999999999988861 1245888888888764
Q ss_pred ---EEEEEcCcCC-CccccceEEecCCC
Q 004198 339 ---RIYIYGGLKG-DILLDDFLVAENSP 362 (769)
Q Consensus 339 ---~iyv~GG~~~-~~~~~D~~~ld~~~ 362 (769)
...++||... ....++++.+....
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (482)
T KOG0379|consen 331 GKDGLGILGGNQILGERLADVFSLQIKL 358 (482)
T ss_pred CccceeeecCccccccchhhcccccccc
Confidence 3455555322 24445555544433
|
|
| >PLN02153 epithiospecifier protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-31 Score=288.71 Aligned_cols=262 Identities=24% Similarity=0.376 Sum_probs=207.8
Q ss_pred CCCcEEEecCC-CCCCcccccceEEEECCEEEEECccCC-CCCCcCcEEEEEccCCcceEEEeeecCCCCC-CccccEEE
Q 004198 83 LTRKWTRIRPA-GEPPSPRAAHAAAAVGTMVVFQGGIGP-AGHSTDDLYVLDLTNDKFKWHRVVVQGQGPG-PRYGHVMD 159 (769)
Q Consensus 83 ~~~~W~~l~~~-g~~P~~R~~hs~~~~~~~Iyv~GG~~~-~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~-~R~~hs~~ 159 (769)
...+|.++... +..|.||..|++++++++|||+||... .....+++|+||+.+ .+|.++++.+..|. .+.+|+++
T Consensus 5 ~~~~W~~~~~~~~~~P~pR~~h~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~--~~W~~~~~~~~~p~~~~~~~~~~ 82 (341)
T PLN02153 5 LQGGWIKVEQKGGKGPGPRCSHGIAVVGDKLYSFGGELKPNEHIDKDLYVFDFNT--HTWSIAPANGDVPRISCLGVRMV 82 (341)
T ss_pred cCCeEEEecCCCCCCCCCCCcceEEEECCEEEEECCccCCCCceeCcEEEEECCC--CEEEEcCccCCCCCCccCceEEE
Confidence 55679999874 357899999999999999999999753 233468999999999 77999865444444 35588888
Q ss_pred EECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCC--CCCCcccccEEEEecCCEEEEEcccCCCC-----Ccc
Q 004198 160 LVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEG--DRPSARMYATASARSDGMFLLCGGRDASG-----APL 232 (769)
Q Consensus 160 ~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~--~~P~~r~~hsa~~~~~g~l~v~GG~~~~~-----~~l 232 (769)
++++ +||+|||.+....++++++||+.++ +|+.++.+. ..|.+|..|++++ .+++|||+||.+..+ ..+
T Consensus 83 ~~~~-~iyv~GG~~~~~~~~~v~~yd~~t~--~W~~~~~~~~~~~p~~R~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~ 158 (341)
T PLN02153 83 AVGT-KLYIFGGRDEKREFSDFYSYDTVKN--EWTFLTKLDEEGGPEARTFHSMAS-DENHVYVFGGVSKGGLMKTPERF 158 (341)
T ss_pred EECC-EEEEECCCCCCCccCcEEEEECCCC--EEEEeccCCCCCCCCCceeeEEEE-ECCEEEEECCccCCCccCCCccc
Confidence 8887 8999999988778899999999998 999987652 2378899888875 577999999986432 246
Q ss_pred cceEEEecCCCCceEEEeCCC--CCCCcccceEEEEeCCEEEEEecccCC----CCcccCCCcEEEEECCCCcEEeccCC
Q 004198 233 ADAYGLLMHRNGQWEWTLAPG--VAPSPRYQHAAVFVGARLHVTGGALRG----GRAIEGEAAVAVLDTAAGVWLDRNGL 306 (769)
Q Consensus 233 ~d~~~ld~~~~~~W~W~~~~~--~~P~~R~~hs~~~~~~~i~V~GG~~~~----~~~~~~~~~v~~yd~~t~~W~~~~~~ 306 (769)
++++.||..++ +|..++. .+|.+|.+|++++++++|||+||.... +......+++++||+++++|+++...
T Consensus 159 ~~v~~yd~~~~---~W~~l~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~gG~~~~~~~~v~~yd~~~~~W~~~~~~ 235 (341)
T PLN02153 159 RTIEAYNIADG---KWVQLPDPGENFEKRGGAGFAVVQGKIWVVYGFATSILPGGKSDYESNAVQFFDPASGKWTEVETT 235 (341)
T ss_pred ceEEEEECCCC---eEeeCCCCCCCCCCCCcceEEEECCeEEEEeccccccccCCccceecCceEEEEcCCCcEEecccc
Confidence 78999999877 7777664 346889999999999999999997521 11112257899999999999999764
Q ss_pred ccCCCCCCCCCCCCCccCcccccceEEEEeCCEEEEEcCcC---------CCccccceEEecCCCCccccC
Q 004198 307 VTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLK---------GDILLDDFLVAENSPFQSDVN 368 (769)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~~~~iyv~GG~~---------~~~~~~D~~~ld~~~~~~~~~ 368 (769)
+.. |.+|..|++++++++||||||.. ....++|+|.+|..+.+|...
T Consensus 236 g~~---------------P~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~n~v~~~d~~~~~W~~~ 291 (341)
T PLN02153 236 GAK---------------PSARSVFAHAVVGKYIIIFGGEVWPDLKGHLGPGTLSNEGYALDTETLVWEKL 291 (341)
T ss_pred CCC---------------CCCcceeeeEEECCEEEEECcccCCccccccccccccccEEEEEcCccEEEec
Confidence 321 45899999999999999999973 234578999999998887644
|
|
| >PRK14131 N-acetylneuraminic acid mutarotase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-31 Score=292.57 Aligned_cols=288 Identities=19% Similarity=0.223 Sum_probs=217.4
Q ss_pred eeecCCCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECC--CCcEEEecCCCCC
Q 004198 19 YWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVL--TRKWTRIRPAGEP 96 (769)
Q Consensus 19 ~w~~~~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~--~~~W~~l~~~g~~ 96 (769)
.++..+++|.||..++++.+ +++|||+||.. .+.+++||+. +++|.++++. +
T Consensus 18 ~~~~l~~lP~~~~~~~~~~~------~~~iyv~gG~~------------------~~~~~~~d~~~~~~~W~~l~~~--p 71 (376)
T PRK14131 18 NAEQLPDLPVPFKNGTGAID------NNTVYVGLGSA------------------GTSWYKLDLNAPSKGWTKIAAF--P 71 (376)
T ss_pred ecccCCCCCcCccCCeEEEE------CCEEEEEeCCC------------------CCeEEEEECCCCCCCeEECCcC--C
Confidence 47788999999998898888 89999999962 1358899987 4789998755 2
Q ss_pred CcccccceEEEECCEEEEECccCC-C----CCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEec
Q 004198 97 PSPRAAHAAAAVGTMVVFQGGIGP-A----GHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSG 171 (769)
Q Consensus 97 P~~R~~hs~~~~~~~Iyv~GG~~~-~----~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG 171 (769)
..+|..|++++++++|||+||... . ...++++|+||+.+ ++|+++.. ..|.+|.+|+++++.+++||++||
T Consensus 72 ~~~r~~~~~v~~~~~IYV~GG~~~~~~~~~~~~~~~v~~YD~~~--n~W~~~~~--~~p~~~~~~~~~~~~~~~IYv~GG 147 (376)
T PRK14131 72 GGPREQAVAAFIDGKLYVFGGIGKTNSEGSPQVFDDVYKYDPKT--NSWQKLDT--RSPVGLAGHVAVSLHNGKAYITGG 147 (376)
T ss_pred CCCcccceEEEECCEEEEEcCCCCCCCCCceeEcccEEEEeCCC--CEEEeCCC--CCCCcccceEEEEeeCCEEEEECC
Confidence 257999999999999999999754 1 13468999999999 77999952 357788889887744569999999
Q ss_pred CCCC----------------------------------CccCceeEEeCCCCCceEEEcCCCCCCCC-cccccEEEEecC
Q 004198 172 NDGK----------------------------------RVLSDAWALDTAQKPYVWQRLNPEGDRPS-ARMYATASARSD 216 (769)
Q Consensus 172 ~~~~----------------------------------~~~~dv~~~d~~~~~~~W~~v~~~~~~P~-~r~~hsa~~~~~ 216 (769)
.+.. ...+++++||+.++ +|+.+.++ |. +|..| +++..+
T Consensus 148 ~~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~v~~YD~~t~--~W~~~~~~---p~~~~~~~-a~v~~~ 221 (376)
T PRK14131 148 VNKNIFDGYFEDLAAAGKDKTPKDKINDAYFDKKPEDYFFNKEVLSYDPSTN--QWKNAGES---PFLGTAGS-AVVIKG 221 (376)
T ss_pred CCHHHHHHHHhhhhhcccchhhhhhhHHHHhcCChhhcCcCceEEEEECCCC--eeeECCcC---CCCCCCcc-eEEEEC
Confidence 7532 12578999999999 99998765 54 45545 445568
Q ss_pred CEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCccc--------ceEEEEeCCEEEEEecccCCCCc-----
Q 004198 217 GMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRY--------QHAAVFVGARLHVTGGALRGGRA----- 283 (769)
Q Consensus 217 g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~--------~hs~~~~~~~i~V~GG~~~~~~~----- 283 (769)
++||++||....+....++|.++.+. .+.+|...+.+ |.+|. ++.+++++++|||+||.......
T Consensus 222 ~~iYv~GG~~~~~~~~~~~~~~~~~~-~~~~W~~~~~~-p~~~~~~~~~~~~~~~a~~~~~~iyv~GG~~~~~~~~~~~~ 299 (376)
T PRK14131 222 NKLWLINGEIKPGLRTDAVKQGKFTG-NNLKWQKLPDL-PPAPGGSSQEGVAGAFAGYSNGVLLVAGGANFPGARENYQN 299 (376)
T ss_pred CEEEEEeeeECCCcCChhheEEEecC-CCcceeecCCC-CCCCcCCcCCccceEeceeECCEEEEeeccCCCCChhhhhc
Confidence 89999999866555566777665421 12378887755 44442 33467789999999997642210
Q ss_pred --------ccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccCcccccceEEEEeCCEEEEEcCcCC-Cccccc
Q 004198 284 --------IEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKG-DILLDD 354 (769)
Q Consensus 284 --------~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~~~~iyv~GG~~~-~~~~~D 354 (769)
......+++||+++++|+.+..++. +|..+++++++++|||+||... ...++|
T Consensus 300 ~~~~~~~~~~~~~~~e~yd~~~~~W~~~~~lp~------------------~r~~~~av~~~~~iyv~GG~~~~~~~~~~ 361 (376)
T PRK14131 300 GKLYAHEGLKKSWSDEIYALVNGKWQKVGELPQ------------------GLAYGVSVSWNNGVLLIGGETAGGKAVSD 361 (376)
T ss_pred CCcccccCCcceeehheEEecCCcccccCcCCC------------------CccceEEEEeCCEEEEEcCCCCCCcEeee
Confidence 0112347899999999999987754 8899999999999999999864 367899
Q ss_pred eEEecCCC
Q 004198 355 FLVAENSP 362 (769)
Q Consensus 355 ~~~ld~~~ 362 (769)
++.++.+.
T Consensus 362 v~~~~~~~ 369 (376)
T PRK14131 362 VTLLSWDG 369 (376)
T ss_pred EEEEEEcC
Confidence 98887664
|
|
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-32 Score=310.96 Aligned_cols=253 Identities=11% Similarity=0.113 Sum_probs=214.3
Q ss_pred CCCcccccceeecCCCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEE
Q 004198 10 APSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTR 89 (769)
Q Consensus 10 ~~~y~~~~~~w~~~~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~ 89 (769)
.-+||+.++.|...+++|.+|.+|+++++ +++||++||...... ..+++++||+.+++|..
T Consensus 274 v~~yd~~~~~W~~l~~mp~~r~~~~~a~l------~~~IYviGG~~~~~~-------------~~~~v~~Yd~~~n~W~~ 334 (557)
T PHA02713 274 ILVYNINTMEYSVISTIPNHIINYASAIV------DNEIIIAGGYNFNNP-------------SLNKVYKINIENKIHVE 334 (557)
T ss_pred EEEEeCCCCeEEECCCCCccccceEEEEE------CCEEEEEcCCCCCCC-------------ccceEEEEECCCCeEee
Confidence 35799999999999999999999999999 999999999753221 46889999999999998
Q ss_pred ecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEE
Q 004198 90 IRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSV 169 (769)
Q Consensus 90 l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~ 169 (769)
++++ |.+|..|++++++++||++||..+. ...+++++||+.+ .+|..+ +++|.+|.+|+++++++ +||++
T Consensus 335 ~~~m---~~~R~~~~~~~~~g~IYviGG~~~~-~~~~sve~Ydp~~--~~W~~~---~~mp~~r~~~~~~~~~g-~IYvi 404 (557)
T PHA02713 335 LPPM---IKNRCRFSLAVIDDTIYAIGGQNGT-NVERTIECYTMGD--DKWKML---PDMPIALSSYGMCVLDQ-YIYII 404 (557)
T ss_pred CCCC---cchhhceeEEEECCEEEEECCcCCC-CCCceEEEEECCC--CeEEEC---CCCCcccccccEEEECC-EEEEE
Confidence 8765 7899999999999999999997533 4578899999999 679998 58999999999988886 99999
Q ss_pred ecCCCC------------------CccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCc
Q 004198 170 SGNDGK------------------RVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAP 231 (769)
Q Consensus 170 GG~~~~------------------~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~ 231 (769)
||.++. ..++.+++||++++ +|+.++++ |.+|..|++++ .+++||++||.+.....
T Consensus 405 GG~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YDP~td--~W~~v~~m---~~~r~~~~~~~-~~~~IYv~GG~~~~~~~ 478 (557)
T PHA02713 405 GGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVNN--IWETLPNF---WTGTIRPGVVS-HKDDIYVVCDIKDEKNV 478 (557)
T ss_pred eCCCcccccccccccccccccccccccceEEEECCCCC--eEeecCCC---CcccccCcEEE-ECCEEEEEeCCCCCCcc
Confidence 997642 13678999999999 99999876 77888777665 57899999998754333
Q ss_pred ccceEEEecCC-CCceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccCCcc
Q 004198 232 LADAYGLLMHR-NGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVT 308 (769)
Q Consensus 232 l~d~~~ld~~~-~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~ 308 (769)
.+.+++||+.+ + +|..++.+ |.+|..+++++++++||++||..+. ..+++||+.+++|+.+.+...
T Consensus 479 ~~~ve~Ydp~~~~---~W~~~~~m-~~~r~~~~~~~~~~~iyv~Gg~~~~-------~~~e~yd~~~~~W~~~~~~~~ 545 (557)
T PHA02713 479 KTCIFRYNTNTYN---GWELITTT-ESRLSALHTILHDNTIMMLHCYESY-------MLQDTFNVYTYEWNHICHQHS 545 (557)
T ss_pred ceeEEEecCCCCC---CeeEcccc-CcccccceeEEECCEEEEEeeecce-------eehhhcCcccccccchhhhcC
Confidence 45679999998 6 78888765 7899999999999999999997652 368999999999999887743
|
|
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-31 Score=306.13 Aligned_cols=252 Identities=13% Similarity=0.120 Sum_probs=213.8
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCcc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRY 154 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~ 154 (769)
..+++||+.+++|..++++ |.+|..|+++++++.||++||........+++++||+.+ ++|.++ .++|.+|.
T Consensus 272 ~~v~~yd~~~~~W~~l~~m---p~~r~~~~~a~l~~~IYviGG~~~~~~~~~~v~~Yd~~~--n~W~~~---~~m~~~R~ 343 (557)
T PHA02713 272 PCILVYNINTMEYSVISTI---PNHIINYASAIVDNEIIIAGGYNFNNPSLNKVYKINIEN--KIHVEL---PPMIKNRC 343 (557)
T ss_pred CCEEEEeCCCCeEEECCCC---CccccceEEEEECCEEEEEcCCCCCCCccceEEEEECCC--CeEeeC---CCCcchhh
Confidence 5789999999999999865 788999999999999999999754445678999999999 679988 58999999
Q ss_pred ccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCC-----
Q 004198 155 GHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASG----- 229 (769)
Q Consensus 155 ~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~----- 229 (769)
+|+++++++ +||++||.++...++++++||+.++ +|+.++++ |.+|..|++++ .+++||++||.+...
T Consensus 344 ~~~~~~~~g-~IYviGG~~~~~~~~sve~Ydp~~~--~W~~~~~m---p~~r~~~~~~~-~~g~IYviGG~~~~~~~~~~ 416 (557)
T PHA02713 344 RFSLAVIDD-TIYAIGGQNGTNVERTIECYTMGDD--KWKMLPDM---PIALSSYGMCV-LDQYIYIIGGRTEHIDYTSV 416 (557)
T ss_pred ceeEEEECC-EEEEECCcCCCCCCceEEEEECCCC--eEEECCCC---CcccccccEEE-ECCEEEEEeCCCcccccccc
Confidence 999988887 9999999987777899999999999 99999876 78888887775 588999999986431
Q ss_pred ------------CcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCC
Q 004198 230 ------------APLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAA 297 (769)
Q Consensus 230 ------------~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t 297 (769)
..++.++.||+.++ +|..++.+ +.+|.+|++++++++|||+||.++... ..+.+++||+++
T Consensus 417 ~~~~~~~~~~~~~~~~~ve~YDP~td---~W~~v~~m-~~~r~~~~~~~~~~~IYv~GG~~~~~~---~~~~ve~Ydp~~ 489 (557)
T PHA02713 417 HHMNSIDMEEDTHSSNKVIRYDTVNN---IWETLPNF-WTGTIRPGVVSHKDDIYVVCDIKDEKN---VKTCIFRYNTNT 489 (557)
T ss_pred cccccccccccccccceEEEECCCCC---eEeecCCC-CcccccCcEEEECCEEEEEeCCCCCCc---cceeEEEecCCC
Confidence 12678999999988 88888766 689999999999999999999764321 134589999999
Q ss_pred -CcEEeccCCccCCCCCCCCCCCCCccCcccccceEEEEeCCEEEEEcCcCCCccccceEEecCCCCccccCC
Q 004198 298 -GVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLDDFLVAENSPFQSDVNS 369 (769)
Q Consensus 298 -~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~~~~iyv~GG~~~~~~~~D~~~ld~~~~~~~~~~ 369 (769)
++|+.+..++. +|..+++++++++||++||+++. ..+.++|..+-+|....
T Consensus 490 ~~~W~~~~~m~~------------------~r~~~~~~~~~~~iyv~Gg~~~~---~~~e~yd~~~~~W~~~~ 541 (557)
T PHA02713 490 YNGWELITTTES------------------RLSALHTILHDNTIMMLHCYESY---MLQDTFNVYTYEWNHIC 541 (557)
T ss_pred CCCeeEccccCc------------------ccccceeEEECCEEEEEeeecce---eehhhcCcccccccchh
Confidence 89999998855 99999999999999999999883 35667777777766433
|
|
| >TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.3e-30 Score=281.00 Aligned_cols=275 Identities=16% Similarity=0.197 Sum_probs=206.4
Q ss_pred CCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCC--CcEEEecCCCCCCcccccceE
Q 004198 28 GPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLT--RKWTRIRPAGEPPSPRAAHAA 105 (769)
Q Consensus 28 ~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~--~~W~~l~~~g~~P~~R~~hs~ 105 (769)
..+.||.+.++ ++.||++||....... .........++++|+|+... .+|..+.+ +|.+|..+++
T Consensus 2 ~~~~g~~~~~~------~~~l~v~GG~~~~~~~----~~~~g~~~~~~~v~~~~~~~~~~~W~~~~~---lp~~r~~~~~ 68 (323)
T TIGR03548 2 LGVAGCYAGII------GDYILVAGGCNFPEDP----LAEGGKKKNYKGIYIAKDENSNLKWVKDGQ---LPYEAAYGAS 68 (323)
T ss_pred CceeeEeeeEE------CCEEEEeeccCCCCCc----hhhCCcEEeeeeeEEEecCCCceeEEEccc---CCccccceEE
Confidence 45678899999 9999999998764310 00000122578999996333 26998765 4788998999
Q ss_pred EEECCEEEEECccCCCCCCcCcEEEEEccCCcc--eEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeE
Q 004198 106 AAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKF--KWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWA 183 (769)
Q Consensus 106 ~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~--~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~ 183 (769)
+++++.||++||... ...++++|+||+.++.+ +|..+ +++|.+|.+|+++++++ +||++||......++++|+
T Consensus 69 ~~~~~~lyviGG~~~-~~~~~~v~~~d~~~~~w~~~~~~~---~~lp~~~~~~~~~~~~~-~iYv~GG~~~~~~~~~v~~ 143 (323)
T TIGR03548 69 VSVENGIYYIGGSNS-SERFSSVYRITLDESKEELICETI---GNLPFTFENGSACYKDG-TLYVGGGNRNGKPSNKSYL 143 (323)
T ss_pred EEECCEEEEEcCCCC-CCCceeEEEEEEcCCceeeeeeEc---CCCCcCccCceEEEECC-EEEEEeCcCCCccCceEEE
Confidence 999999999999854 34578999999998442 23454 68999999999988876 9999999866667899999
Q ss_pred EeCCCCCceEEEcCCCCCCC-CcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCC----CCCc
Q 004198 184 LDTAQKPYVWQRLNPEGDRP-SARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGV----APSP 258 (769)
Q Consensus 184 ~d~~~~~~~W~~v~~~~~~P-~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~----~P~~ 258 (769)
||+.++ +|++++++ | .+|..|+++ ..+++||++||.+.. ...|++.||+.++ +|..++.+ .|..
T Consensus 144 yd~~~~--~W~~~~~~---p~~~r~~~~~~-~~~~~iYv~GG~~~~--~~~~~~~yd~~~~---~W~~~~~~~~~~~p~~ 212 (323)
T TIGR03548 144 FNLETQ--EWFELPDF---PGEPRVQPVCV-KLQNELYVFGGGSNI--AYTDGYKYSPKKN---QWQKVADPTTDSEPIS 212 (323)
T ss_pred EcCCCC--CeeECCCC---CCCCCCcceEE-EECCEEEEEcCCCCc--cccceEEEecCCC---eeEECCCCCCCCCcee
Confidence 999999 99999765 3 357666665 457899999998643 3578999999977 77777643 2344
Q ss_pred ccceEEEE-eCCEEEEEecccCCCC----------------------------cccCCCcEEEEECCCCcEEeccCCccC
Q 004198 259 RYQHAAVF-VGARLHVTGGALRGGR----------------------------AIEGEAAVAVLDTAAGVWLDRNGLVTS 309 (769)
Q Consensus 259 R~~hs~~~-~~~~i~V~GG~~~~~~----------------------------~~~~~~~v~~yd~~t~~W~~~~~~~~~ 309 (769)
+..+++++ .+++|||+||.+.... .....+++++||+.+++|+.+..++.
T Consensus 213 ~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~- 291 (323)
T TIGR03548 213 LLGAASIKINESLLLCIGGFNKDVYNDAVIDLATMKDESLKGYKKEYFLKPPEWYNWNRKILIYNVRTGKWKSIGNSPF- 291 (323)
T ss_pred ccceeEEEECCCEEEEECCcCHHHHHHHHhhhhhccchhhhhhHHHHhCCCccccCcCceEEEEECCCCeeeEcccccc-
Confidence 44555444 4799999999864210 00113679999999999999986642
Q ss_pred CCCCCCCCCCCCccCcccccceEEEEeCCEEEEEcCcCC
Q 004198 310 SRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKG 348 (769)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~R~~hs~~~~~~~iyv~GG~~~ 348 (769)
.+|..+++++++++||++||...
T Consensus 292 ----------------~~r~~~~~~~~~~~iyv~GG~~~ 314 (323)
T TIGR03548 292 ----------------FARCGAALLLTGNNIFSINGELK 314 (323)
T ss_pred ----------------cccCchheEEECCEEEEEecccc
Confidence 28999999999999999999643
|
Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat. |
| >KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-32 Score=280.09 Aligned_cols=206 Identities=31% Similarity=0.564 Sum_probs=174.2
Q ss_pred ccCHHHHHHHHHHHHHHHhcCCceeeec----CCEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCC
Q 004198 553 FLDSYEVGELCYAAEQIFMQEPTVLQLR----APVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQ 628 (769)
Q Consensus 553 ~~~~~~~~~l~~~~~~~~~~e~~~l~~~----~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~ 628 (769)
.|....|..|+.+|+++|++-|++-++. ..|.||||+||+++||+-+|-+.|+|+... .|||-||+||||.
T Consensus 133 ~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDDL~~I~yKNGlPS~~n-----pYvFNGDFVDRGk 207 (631)
T KOG0377|consen 133 RLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDDLLVILYKNGLPSSSN-----PYVFNGDFVDRGK 207 (631)
T ss_pred hccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccceEEEEecCCCCCCCC-----CeeecCchhhccc
Confidence 4667789999999999999999998875 369999999999999999999999998764 7999999999999
Q ss_pred ChHHHHHHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCCCchhhhHHHhHhhccccceEEEeceEEEEcC
Q 004198 629 HSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHG 708 (769)
Q Consensus 629 ~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~f~~lP~~~~i~~~i~~vHg 708 (769)
+|+|+|++|+++-+-||..+|+-|||||+..+|..|||..|...||... +..+.+-+.++|.|||++.+++.+||.|||
T Consensus 208 ~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~-~k~Ilr~leevy~WLPi~tiid~~ilvvHG 286 (631)
T KOG0377|consen 208 RSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRH-GKRILRFLEEVYRWLPIGTIIDSRILVVHG 286 (631)
T ss_pred cchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhc-ccHHHHHHHHHHHhcchhhhcccceEEEec
Confidence 9999999999999999999999999999999999999999999999887 778888999999999999999999999999
Q ss_pred CCCCCCCChHHhhhccC---------CcccCC------------CccceeceeccCCCCC-----cccccCcceEEeehh
Q 004198 709 GIGRSIHSVEQIEKLER---------PITMDA------------GSIILMDLLWFVLNIS-----TILRSMVLYIILFSL 762 (769)
Q Consensus 709 Gi~~~~~~~~~i~~~~r---------p~~~~~------------~~~~~~dllWsdp~~~-----~~~~~~~~~~~~~~~ 762 (769)
|++.. +.++-+.+++| |++... +-+.+.|+|||||... ..+++.. --||+
T Consensus 287 GiSd~-Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~GC~pNt~RGgG---~yFGp 362 (631)
T KOG0377|consen 287 GISDS-TDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATMGCVPNTLRGGG---CYFGP 362 (631)
T ss_pred Ccccc-hhHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcccccCCCcccccCCc---ceeCc
Confidence 99865 66777766655 222111 1145689999999653 3333333 34677
Q ss_pred hhhhhc
Q 004198 763 KIFISF 768 (769)
Q Consensus 763 ~~~~~~ 768 (769)
|+--.|
T Consensus 363 DvT~~~ 368 (631)
T KOG0377|consen 363 DVTDNF 368 (631)
T ss_pred hHHHHH
Confidence 765444
|
|
| >KOG0379 consensus Kelch repeat-containing proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-29 Score=285.04 Aligned_cols=254 Identities=31% Similarity=0.468 Sum_probs=222.1
Q ss_pred CCCCCCcccccceEEEECCEEEEECccCCCCCCcC-cEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEe
Q 004198 92 PAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTD-DLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVS 170 (769)
Q Consensus 92 ~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~-dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~G 170 (769)
..+..|.+|+.|+++.+++++|||||.+......+ |+|+||..+ ..|......+..|.+|++|+++++++ +||+||
T Consensus 53 ~~~~~p~~R~~hs~~~~~~~~~vfGG~~~~~~~~~~dl~~~d~~~--~~w~~~~~~g~~p~~r~g~~~~~~~~-~l~lfG 129 (482)
T KOG0379|consen 53 VLGVGPIPRAGHSAVLIGNKLYVFGGYGSGDRLTDLDLYVLDLES--QLWTKPAATGDEPSPRYGHSLSAVGD-KLYLFG 129 (482)
T ss_pred cCCCCcchhhccceeEECCEEEEECCCCCCCccccceeEEeecCC--cccccccccCCCCCcccceeEEEECC-eEEEEc
Confidence 55677999999999999999999999865554444 799999999 77999999999999999999999996 999999
Q ss_pred cCCC-CCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEE
Q 004198 171 GNDG-KRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWT 249 (769)
Q Consensus 171 G~~~-~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~ 249 (769)
|.+. ...++++++||+.++ +|..+.+.+.+|++|.+|+++++. .++|||||.+..+..++|+|.||+.+. +|.-.
T Consensus 130 G~~~~~~~~~~l~~~d~~t~--~W~~l~~~~~~P~~r~~Hs~~~~g-~~l~vfGG~~~~~~~~ndl~i~d~~~~-~W~~~ 205 (482)
T KOG0379|consen 130 GTDKKYRNLNELHSLDLSTR--TWSLLSPTGDPPPPRAGHSATVVG-TKLVVFGGIGGTGDSLNDLHIYDLETS-TWSEL 205 (482)
T ss_pred cccCCCCChhheEeccCCCC--cEEEecCcCCCCCCcccceEEEEC-CEEEEECCccCcccceeeeeeeccccc-cceec
Confidence 9984 667899999999999 999999999999999999999875 799999999888778999999999866 47667
Q ss_pred eCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccCccccc
Q 004198 250 LAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRC 329 (769)
Q Consensus 250 ~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~R~ 329 (769)
...+..|.||++|++++++++++||||...+. ..++++|+||+.+.+|..+...... |.+|.
T Consensus 206 ~~~g~~P~pR~gH~~~~~~~~~~v~gG~~~~~---~~l~D~~~ldl~~~~W~~~~~~g~~---------------p~~R~ 267 (482)
T KOG0379|consen 206 DTQGEAPSPRYGHAMVVVGNKLLVFGGGDDGD---VYLNDVHILDLSTWEWKLLPTGGDL---------------PSPRS 267 (482)
T ss_pred ccCCCCCCCCCCceEEEECCeEEEEeccccCC---ceecceEeeecccceeeeccccCCC---------------CCCcc
Confidence 77799999999999999999999999987332 2488999999999999977766543 66999
Q ss_pred ceEEEEeCCEEEEEcCcCCC-c-cccceEEecCCCCccccCCC
Q 004198 330 RHASASIGVRIYIYGGLKGD-I-LLDDFLVAENSPFQSDVNSP 370 (769)
Q Consensus 330 ~hs~~~~~~~iyv~GG~~~~-~-~~~D~~~ld~~~~~~~~~~~ 370 (769)
+|+++..+.+++|+||.... . .+.|+|.|+.++..+.....
T Consensus 268 ~h~~~~~~~~~~l~gG~~~~~~~~l~~~~~l~~~~~~w~~~~~ 310 (482)
T KOG0379|consen 268 GHSLTVSGDHLLLFGGGTDPKQEPLGDLYGLDLETLVWSKVES 310 (482)
T ss_pred eeeeEEECCEEEEEcCCcccccccccccccccccccceeeeec
Confidence 99999999999999999874 3 79999999999777665443
|
|
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.1e-29 Score=289.01 Aligned_cols=253 Identities=17% Similarity=0.196 Sum_probs=209.9
Q ss_pred CcccccceeecCCCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEec
Q 004198 12 SYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIR 91 (769)
Q Consensus 12 ~y~~~~~~w~~~~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~ 91 (769)
+|+..++.|....+.|. +..|+++++ +++||++||...... ..+++++||+.+++|..++
T Consensus 268 ~~~~~~~~~~~~~~~~~-~~~~~~~~~------~~~lyv~GG~~~~~~-------------~~~~v~~yd~~~~~W~~~~ 327 (534)
T PHA03098 268 TNYSPLSEINTIIDIHY-VYCFGSVVL------NNVIYFIGGMNKNNL-------------SVNSVVSYDTKTKSWNKVP 327 (534)
T ss_pred ecchhhhhcccccCccc-cccceEEEE------CCEEEEECCCcCCCC-------------eeccEEEEeCCCCeeeECC
Confidence 57788888988876664 445688888 899999999864332 4679999999999999887
Q ss_pred CCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEec
Q 004198 92 PAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSG 171 (769)
Q Consensus 92 ~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG 171 (769)
.+ |.+|..|++++++++||++||.+ .....+++++||+.+ .+|+.+ .++|.+|++|+++.+++ .+|++||
T Consensus 328 ~~---~~~R~~~~~~~~~~~lyv~GG~~-~~~~~~~v~~yd~~~--~~W~~~---~~lp~~r~~~~~~~~~~-~iYv~GG 397 (534)
T PHA03098 328 EL---IYPRKNPGVTVFNNRIYVIGGIY-NSISLNTVESWKPGE--SKWREE---PPLIFPRYNPCVVNVNN-LIYVIGG 397 (534)
T ss_pred CC---CcccccceEEEECCEEEEEeCCC-CCEecceEEEEcCCC--CceeeC---CCcCcCCccceEEEECC-EEEEECC
Confidence 54 68899999999999999999986 344678999999999 679988 58999999999988876 9999999
Q ss_pred CCC-CCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCC--cccceEEEecCCCCceEE
Q 004198 172 NDG-KRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGA--PLADAYGLLMHRNGQWEW 248 (769)
Q Consensus 172 ~~~-~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~--~l~d~~~ld~~~~~~W~W 248 (769)
... ...++++++||+.++ +|+.+.++ |.+|..|+++. .++++|++||.+.... .+++++.||+.++ +|
T Consensus 398 ~~~~~~~~~~v~~yd~~t~--~W~~~~~~---p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~---~W 468 (534)
T PHA03098 398 ISKNDELLKTVECFSLNTN--KWSKGSPL---PISHYGGCAIY-HDGKIYVIGGISYIDNIKVYNIVESYNPVTN---KW 468 (534)
T ss_pred cCCCCcccceEEEEeCCCC--eeeecCCC---CccccCceEEE-ECCEEEEECCccCCCCCcccceEEEecCCCC---ce
Confidence 643 345789999999999 99998765 78888888765 5789999999865432 3677999999988 88
Q ss_pred EeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccCCcc
Q 004198 249 TLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVT 308 (769)
Q Consensus 249 ~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~ 308 (769)
...+.. |.+|..|+++.++++|||+||..... ..+++++||+++++|+.+...|.
T Consensus 469 ~~~~~~-~~~r~~~~~~~~~~~iyv~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~p~ 523 (534)
T PHA03098 469 TELSSL-NFPRINASLCIFNNKIYVVGGDKYEY----YINEIEVYDDKTNTWTLFCKFPK 523 (534)
T ss_pred eeCCCC-CcccccceEEEECCEEEEEcCCcCCc----ccceeEEEeCCCCEEEecCCCcc
Confidence 888755 68899999999999999999987543 25689999999999999987644
|
|
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-28 Score=286.10 Aligned_cols=254 Identities=15% Similarity=0.224 Sum_probs=213.7
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCcc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRY 154 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~ 154 (769)
..+.+|+..+++|..+... | .+..|+++++++.||++||........+++++||+.+ ++|..+ +++|.+|.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~--~~W~~~---~~~~~~R~ 334 (534)
T PHA03098 264 YNYITNYSPLSEINTIIDI---H-YVYCFGSVVLNNVIYFIGGMNKNNLSVNSVVSYDTKT--KSWNKV---PELIYPRK 334 (534)
T ss_pred ceeeecchhhhhcccccCc---c-ccccceEEEECCEEEEECCCcCCCCeeccEEEEeCCC--CeeeEC---CCCCcccc
Confidence 3456788889999987532 2 3556799999999999999876666778999999999 779888 57899999
Q ss_pred ccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccc
Q 004198 155 GHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLAD 234 (769)
Q Consensus 155 ~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d 234 (769)
+|+++++++ .+|++||.+.....+++++||+.++ +|+.++++ |.+|..|+++. .++++|++||.......+++
T Consensus 335 ~~~~~~~~~-~lyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~l---p~~r~~~~~~~-~~~~iYv~GG~~~~~~~~~~ 407 (534)
T PHA03098 335 NPGVTVFNN-RIYVIGGIYNSISLNTVESWKPGES--KWREEPPL---IFPRYNPCVVN-VNNLIYVIGGISKNDELLKT 407 (534)
T ss_pred cceEEEECC-EEEEEeCCCCCEecceEEEEcCCCC--ceeeCCCc---CcCCccceEEE-ECCEEEEECCcCCCCcccce
Confidence 999988876 9999999987778899999999999 99998766 78898888865 57899999998666556899
Q ss_pred eEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccCCccCCCCCC
Q 004198 235 AYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSK 314 (769)
Q Consensus 235 ~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~ 314 (769)
++.||+.++ +|...+.. |.+|.+|+++.++++|||+||...... ....+.+++||+.+++|+.++.++.
T Consensus 408 v~~yd~~t~---~W~~~~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~~-~~~~~~v~~yd~~~~~W~~~~~~~~------ 476 (534)
T PHA03098 408 VECFSLNTN---KWSKGSPL-PISHYGGCAIYHDGKIYVIGGISYIDN-IKVYNIVESYNPVTNKWTELSSLNF------ 476 (534)
T ss_pred EEEEeCCCC---eeeecCCC-CccccCceEEEECCEEEEECCccCCCC-CcccceEEEecCCCCceeeCCCCCc------
Confidence 999999877 78887654 789999999999999999999764332 1124569999999999999987644
Q ss_pred CCCCCCCccCcccccceEEEEeCCEEEEEcCcCCCccccceEEecCCCCcccc
Q 004198 315 GHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLDDFLVAENSPFQSDV 367 (769)
Q Consensus 315 ~~~~~~~~~~~~~R~~hs~~~~~~~iyv~GG~~~~~~~~D~~~ld~~~~~~~~ 367 (769)
+|..+++++++++|||+||.++....++++.+|..+.+|..
T Consensus 477 ------------~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 517 (534)
T PHA03098 477 ------------PRINASLCIFNNKIYVVGGDKYEYYINEIEVYDDKTNTWTL 517 (534)
T ss_pred ------------ccccceEEEECCEEEEEcCCcCCcccceeEEEeCCCCEEEe
Confidence 88999999999999999999887778999999988877654
|
|
| >KOG1230 consensus Protein containing repeated kelch motifs [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=253.87 Aligned_cols=216 Identities=31% Similarity=0.525 Sum_probs=185.3
Q ss_pred CcccccceeecC--CCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEE
Q 004198 12 SYRTLETYWDTD--EDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTR 89 (769)
Q Consensus 12 ~y~~~~~~w~~~--~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~ 89 (769)
.|++.++.|+.+ +..|.||++|.+++++. +.+|||||.... |....+.-+.|+|.||+.+++|++
T Consensus 102 ~Yn~k~~eWkk~~spn~P~pRsshq~va~~s-----~~l~~fGGEfaS--------Pnq~qF~HYkD~W~fd~~trkweq 168 (521)
T KOG1230|consen 102 SYNTKKNEWKKVVSPNAPPPRSSHQAVAVPS-----NILWLFGGEFAS--------PNQEQFHHYKDLWLFDLKTRKWEQ 168 (521)
T ss_pred EEeccccceeEeccCCCcCCCccceeEEecc-----CeEEEeccccCC--------cchhhhhhhhheeeeeeccchhee
Confidence 589999999966 67789999999999953 499999997532 233344567899999999999999
Q ss_pred ecCCCCCCcccccceEEEECCEEEEECccC---CCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEE
Q 004198 90 IRPAGEPPSPRAAHAAAAVGTMVVFQGGIG---PAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYL 166 (769)
Q Consensus 90 l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~---~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l 166 (769)
|...| -|+||++|-|++..+++++|||+- ..-.++||+|+||+.+ .+|.++.+.|..|.+|+||.+.+.-++.|
T Consensus 169 l~~~g-~PS~RSGHRMvawK~~lilFGGFhd~nr~y~YyNDvy~FdLdt--ykW~Klepsga~PtpRSGcq~~vtpqg~i 245 (521)
T KOG1230|consen 169 LEFGG-GPSPRSGHRMVAWKRQLILFGGFHDSNRDYIYYNDVYAFDLDT--YKWSKLEPSGAGPTPRSGCQFSVTPQGGI 245 (521)
T ss_pred eccCC-CCCCCccceeEEeeeeEEEEcceecCCCceEEeeeeEEEeccc--eeeeeccCCCCCCCCCCcceEEecCCCcE
Confidence 98776 679999999999999999999963 3345789999999999 99999999888999999999988866799
Q ss_pred EEEecCCC---------CCccCceeEEeCCCC---CceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCC-------
Q 004198 167 VSVSGNDG---------KRVLSDAWALDTAQK---PYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDA------- 227 (769)
Q Consensus 167 ~v~GG~~~---------~~~~~dv~~~d~~~~---~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~------- 227 (769)
||+||+.. ....+|+|.++++.+ .|.|.++.+.+..|.||.+.+.++..|++-+.|||...
T Consensus 246 ~vyGGYsK~~~kK~~dKG~~hsDmf~L~p~~~~~dKw~W~kvkp~g~kPspRsgfsv~va~n~kal~FGGV~D~eeeeEs 325 (521)
T KOG1230|consen 246 VVYGGYSKQRVKKDVDKGTRHSDMFLLKPEDGREDKWVWTKVKPSGVKPSPRSGFSVAVAKNHKALFFGGVCDLEEEEES 325 (521)
T ss_pred EEEcchhHhhhhhhhhcCceeeeeeeecCCcCCCcceeEeeccCCCCCCCCCCceeEEEecCCceEEecceecccccchh
Confidence 99999853 336899999999763 48999999999999999999999999999999999854
Q ss_pred -CCCcccceEEEecCCC
Q 004198 228 -SGAPLADAYGLLMHRN 243 (769)
Q Consensus 228 -~~~~l~d~~~ld~~~~ 243 (769)
.+..+||+|.|+..++
T Consensus 326 l~g~F~NDLy~fdlt~n 342 (521)
T KOG1230|consen 326 LSGEFFNDLYFFDLTRN 342 (521)
T ss_pred hhhhhhhhhhheecccc
Confidence 1356899999998876
|
|
| >TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.5e-27 Score=254.54 Aligned_cols=230 Identities=17% Similarity=0.246 Sum_probs=184.5
Q ss_pred eeecCCCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEE-EecCCCCCC
Q 004198 19 YWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWT-RIRPAGEPP 97 (769)
Q Consensus 19 ~w~~~~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~-~l~~~g~~P 97 (769)
.|...+++|.||..|+++++ +++||++||..... ..+++++||+.+++|+ +......+|
T Consensus 52 ~W~~~~~lp~~r~~~~~~~~------~~~lyviGG~~~~~--------------~~~~v~~~d~~~~~w~~~~~~~~~lp 111 (323)
T TIGR03548 52 KWVKDGQLPYEAAYGASVSV------ENGIYYIGGSNSSE--------------RFSSVYRITLDESKEELICETIGNLP 111 (323)
T ss_pred eEEEcccCCccccceEEEEE------CCEEEEEcCCCCCC--------------CceeEEEEEEcCCceeeeeeEcCCCC
Confidence 79999999999998888988 88999999976432 3689999999999983 222334468
Q ss_pred cccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCC-CCccccEEEEECCcEEEEEecCCCCC
Q 004198 98 SPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGP-GPRYGHVMDLVSQRYLVSVSGNDGKR 176 (769)
Q Consensus 98 ~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p-~~R~~hs~~~~~~~~l~v~GG~~~~~ 176 (769)
.+|..|++++++++||++||.. .....+++|+||+.+ .+|++++ ++| .+|..|+++++++ +|||+||.++..
T Consensus 112 ~~~~~~~~~~~~~~iYv~GG~~-~~~~~~~v~~yd~~~--~~W~~~~---~~p~~~r~~~~~~~~~~-~iYv~GG~~~~~ 184 (323)
T TIGR03548 112 FTFENGSACYKDGTLYVGGGNR-NGKPSNKSYLFNLET--QEWFELP---DFPGEPRVQPVCVKLQN-ELYVFGGGSNIA 184 (323)
T ss_pred cCccCceEEEECCEEEEEeCcC-CCccCceEEEEcCCC--CCeeECC---CCCCCCCCcceEEEECC-EEEEEcCCCCcc
Confidence 8999999999999999999974 334579999999999 6799984 566 4788998877776 999999987543
Q ss_pred ccCceeEEeCCCCCceEEEcCCCCC--CCCcccccEEEEecCCEEEEEcccCCCC-------------------------
Q 004198 177 VLSDAWALDTAQKPYVWQRLNPEGD--RPSARMYATASARSDGMFLLCGGRDASG------------------------- 229 (769)
Q Consensus 177 ~~~dv~~~d~~~~~~~W~~v~~~~~--~P~~r~~hsa~~~~~g~l~v~GG~~~~~------------------------- 229 (769)
..++++||++++ +|+++.++.. .|..+..++++++.+++||++||.+...
T Consensus 185 -~~~~~~yd~~~~--~W~~~~~~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (323)
T TIGR03548 185 -YTDGYKYSPKKN--QWQKVADPTTDSEPISLLGAASIKINESLLLCIGGFNKDVYNDAVIDLATMKDESLKGYKKEYFL 261 (323)
T ss_pred -ccceEEEecCCC--eeEECCCCCCCCCceeccceeEEEECCCEEEEECCcCHHHHHHHHhhhhhccchhhhhhHHHHhC
Confidence 467999999999 9999987642 3444555666667788999999986421
Q ss_pred ------CcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCC
Q 004198 230 ------APLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGG 281 (769)
Q Consensus 230 ------~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~ 281 (769)
...++++.||+.++ +|..++..+..+|..++++.++++|||+||....+
T Consensus 262 ~~~~~~~~~~~v~~yd~~~~---~W~~~~~~p~~~r~~~~~~~~~~~iyv~GG~~~pg 316 (323)
T TIGR03548 262 KPPEWYNWNRKILIYNVRTG---KWKSIGNSPFFARCGAALLLTGNNIFSINGELKPG 316 (323)
T ss_pred CCccccCcCceEEEEECCCC---eeeEcccccccccCchheEEECCEEEEEeccccCC
Confidence 01367999999988 88888765446899999999999999999976544
|
Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat. |
| >PRK14131 N-acetylneuraminic acid mutarotase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=6e-26 Score=251.20 Aligned_cols=257 Identities=19% Similarity=0.287 Sum_probs=189.6
Q ss_pred Ccccc--cceeecCCCCC-CCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEE
Q 004198 12 SYRTL--ETYWDTDEDAP-GPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWT 88 (769)
Q Consensus 12 ~y~~~--~~~w~~~~~~P-~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~ 88 (769)
.||.. ++.|...+++| .+|.+|+++.+ +++||++||........ .....+++|+||+.+++|+
T Consensus 54 ~~d~~~~~~~W~~l~~~p~~~r~~~~~v~~------~~~IYV~GG~~~~~~~~--------~~~~~~~v~~YD~~~n~W~ 119 (376)
T PRK14131 54 KLDLNAPSKGWTKIAAFPGGPREQAVAAFI------DGKLYVFGGIGKTNSEG--------SPQVFDDVYKYDPKTNSWQ 119 (376)
T ss_pred EEECCCCCCCeEECCcCCCCCcccceEEEE------CCEEEEEcCCCCCCCCC--------ceeEcccEEEEeCCCCEEE
Confidence 34543 57899999998 58999999999 89999999986411100 0014689999999999999
Q ss_pred EecCCCCCCcccccceEEE-ECCEEEEECccCCCC---------------------------------CCcCcEEEEEcc
Q 004198 89 RIRPAGEPPSPRAAHAAAA-VGTMVVFQGGIGPAG---------------------------------HSTDDLYVLDLT 134 (769)
Q Consensus 89 ~l~~~g~~P~~R~~hs~~~-~~~~Iyv~GG~~~~~---------------------------------~~~~dl~~~d~~ 134 (769)
+++.. .|.+|.+|++++ .+++||++||.+... ...+++++||+.
T Consensus 120 ~~~~~--~p~~~~~~~~~~~~~~~IYv~GG~~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~v~~YD~~ 197 (376)
T PRK14131 120 KLDTR--SPVGLAGHVAVSLHNGKAYITGGVNKNIFDGYFEDLAAAGKDKTPKDKINDAYFDKKPEDYFFNKEVLSYDPS 197 (376)
T ss_pred eCCCC--CCCcccceEEEEeeCCEEEEECCCCHHHHHHHHhhhhhcccchhhhhhhHHHHhcCChhhcCcCceEEEEECC
Confidence 99752 467788888887 799999999975310 124789999999
Q ss_pred CCcceEEEeeecCCCCC-CccccEEEEECCcEEEEEecCCCCC-ccCceeE--EeCCCCCceEEEcCCCCCCCCccc---
Q 004198 135 NDKFKWHRVVVQGQGPG-PRYGHVMDLVSQRYLVSVSGNDGKR-VLSDAWA--LDTAQKPYVWQRLNPEGDRPSARM--- 207 (769)
Q Consensus 135 t~~~~W~~~~~~g~~p~-~R~~hs~~~~~~~~l~v~GG~~~~~-~~~dv~~--~d~~~~~~~W~~v~~~~~~P~~r~--- 207 (769)
+ ++|..+ +++|. +|.+|+++.+++ +|||+||..... ...++|. ||++++ +|+++..+ |.+|.
T Consensus 198 t--~~W~~~---~~~p~~~~~~~a~v~~~~-~iYv~GG~~~~~~~~~~~~~~~~~~~~~--~W~~~~~~---p~~~~~~~ 266 (376)
T PRK14131 198 T--NQWKNA---GESPFLGTAGSAVVIKGN-KLWLINGEIKPGLRTDAVKQGKFTGNNL--KWQKLPDL---PPAPGGSS 266 (376)
T ss_pred C--CeeeEC---CcCCCCCCCcceEEEECC-EEEEEeeeECCCcCChhheEEEecCCCc--ceeecCCC---CCCCcCCc
Confidence 9 779988 56775 788888877776 999999975432 3455665 456666 99999876 44432
Q ss_pred ----ccEEEEecCCEEEEEcccCCCCC-------------cc---cceEEEecCCCCceEEEeCCCCCCCcccceEEEEe
Q 004198 208 ----YATASARSDGMFLLCGGRDASGA-------------PL---ADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV 267 (769)
Q Consensus 208 ----~hsa~~~~~g~l~v~GG~~~~~~-------------~l---~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~ 267 (769)
.+.+++..+++||++||.+.... .+ ..+..||+.++ +|.....+ |.+|..|+++.+
T Consensus 267 ~~~~~~~~a~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~e~yd~~~~---~W~~~~~l-p~~r~~~~av~~ 342 (376)
T PRK14131 267 QEGVAGAFAGYSNGVLLVAGGANFPGARENYQNGKLYAHEGLKKSWSDEIYALVNG---KWQKVGEL-PQGLAYGVSVSW 342 (376)
T ss_pred CCccceEeceeECCEEEEeeccCCCCChhhhhcCCcccccCCcceeehheEEecCC---cccccCcC-CCCccceEEEEe
Confidence 22334456889999999864211 01 23557888776 77777654 789999999999
Q ss_pred CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEe
Q 004198 268 GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLD 302 (769)
Q Consensus 268 ~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~ 302 (769)
+++|||+||....+. ..+++++|+++.+.|+.
T Consensus 343 ~~~iyv~GG~~~~~~---~~~~v~~~~~~~~~~~~ 374 (376)
T PRK14131 343 NNGVLLIGGETAGGK---AVSDVTLLSWDGKKLTV 374 (376)
T ss_pred CCEEEEEcCCCCCCc---EeeeEEEEEEcCCEEEE
Confidence 999999999765432 36789999999888765
|
|
| >PHA02790 Kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-25 Score=255.70 Aligned_cols=208 Identities=19% Similarity=0.251 Sum_probs=175.5
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCC
Q 004198 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHS 124 (769)
Q Consensus 45 ~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~ 124 (769)
++.||++||..... ..+.+++||+.+++|..++++ |.+|..+++++++++||++||...
T Consensus 271 ~~~lyviGG~~~~~--------------~~~~v~~Ydp~~~~W~~~~~m---~~~r~~~~~v~~~~~iYviGG~~~---- 329 (480)
T PHA02790 271 GEVVYLIGGWMNNE--------------IHNNAIAVNYISNNWIPIPPM---NSPRLYASGVPANNKLYVVGGLPN---- 329 (480)
T ss_pred CCEEEEEcCCCCCC--------------cCCeEEEEECCCCEEEECCCC---CchhhcceEEEECCEEEEECCcCC----
Confidence 88999999975322 467899999999999999865 789999999999999999999742
Q ss_pred cCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCC
Q 004198 125 TDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPS 204 (769)
Q Consensus 125 ~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~ 204 (769)
.+++++||+.+ ++|..+ .++|.+|.+|++++.++ +||++||.++. .+.+.+||+.++ +|+.++++ |.
T Consensus 330 ~~sve~ydp~~--n~W~~~---~~l~~~r~~~~~~~~~g-~IYviGG~~~~--~~~ve~ydp~~~--~W~~~~~m---~~ 396 (480)
T PHA02790 330 PTSVERWFHGD--AAWVNM---PSLLKPRCNPAVASINN-VIYVIGGHSET--DTTTEYLLPNHD--QWQFGPST---YY 396 (480)
T ss_pred CCceEEEECCC--CeEEEC---CCCCCCCcccEEEEECC-EEEEecCcCCC--CccEEEEeCCCC--EEEeCCCC---CC
Confidence 25689999988 779998 58999999999988886 99999998654 367999999999 99998876 78
Q ss_pred cccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcc
Q 004198 205 ARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAI 284 (769)
Q Consensus 205 ~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~ 284 (769)
+|..|++++ .+++||++||. +..|++.++ +|...+.+ |.+|.++++++++++|||+||.....
T Consensus 397 ~r~~~~~~~-~~~~IYv~GG~---------~e~ydp~~~---~W~~~~~m-~~~r~~~~~~v~~~~IYviGG~~~~~--- 459 (480)
T PHA02790 397 PHYKSCALV-FGRRLFLVGRN---------AEFYCESSN---TWTLIDDP-IYPRDNPELIIVDNKLLLIGGFYRGS--- 459 (480)
T ss_pred ccccceEEE-ECCEEEEECCc---------eEEecCCCC---cEeEcCCC-CCCccccEEEEECCEEEEECCcCCCc---
Confidence 888887765 58899999984 356788777 88888765 78999999999999999999986432
Q ss_pred cCCCcEEEEECCCCcEEecc
Q 004198 285 EGEAAVAVLDTAAGVWLDRN 304 (769)
Q Consensus 285 ~~~~~v~~yd~~t~~W~~~~ 304 (769)
..+.+++||+++++|+...
T Consensus 460 -~~~~ve~Yd~~~~~W~~~~ 478 (480)
T PHA02790 460 -YIDTIEVYNNRTYSWNIWD 478 (480)
T ss_pred -ccceEEEEECCCCeEEecC
Confidence 2467999999999998754
|
|
| >TIGR03547 muta_rot_YjhT mutatrotase, YjhT family | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-25 Score=244.48 Aligned_cols=247 Identities=20% Similarity=0.324 Sum_probs=181.8
Q ss_pred Cccc--ccceeecCCCCC-CCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEE
Q 004198 12 SYRT--LETYWDTDEDAP-GPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWT 88 (769)
Q Consensus 12 ~y~~--~~~~w~~~~~~P-~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~ 88 (769)
.||+ .++.|...+++| .+|.+|+++.+ +++||++||........ .....+++++||+.+++|+
T Consensus 33 ~~d~~~~~~~W~~l~~~p~~~R~~~~~~~~------~~~iYv~GG~~~~~~~~--------~~~~~~~v~~Yd~~~~~W~ 98 (346)
T TIGR03547 33 KLDLKKPSKGWQKIADFPGGPRNQAVAAAI------DGKLYVFGGIGKANSEG--------SPQVFDDVYRYDPKKNSWQ 98 (346)
T ss_pred EEECCCCCCCceECCCCCCCCcccceEEEE------CCEEEEEeCCCCCCCCC--------cceecccEEEEECCCCEEe
Confidence 3553 578899999999 58999999999 89999999986432100 0014689999999999999
Q ss_pred EecCCCCCCcccccceEE-EECCEEEEECccCCCC---------------------------------CCcCcEEEEEcc
Q 004198 89 RIRPAGEPPSPRAAHAAA-AVGTMVVFQGGIGPAG---------------------------------HSTDDLYVLDLT 134 (769)
Q Consensus 89 ~l~~~g~~P~~R~~hs~~-~~~~~Iyv~GG~~~~~---------------------------------~~~~dl~~~d~~ 134 (769)
+++. ..|.+|.+|+++ +++++||++||..... ..++++++||+.
T Consensus 99 ~~~~--~~p~~~~~~~~~~~~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~YDp~ 176 (346)
T TIGR03547 99 KLDT--RSPVGLLGASGFSLHNGQAYFTGGVNKNIFDGYFADLSAADKDSEPKDKLIAAYFSQPPEDYFWNKNVLSYDPS 176 (346)
T ss_pred cCCC--CCCCcccceeEEEEeCCEEEEEcCcChHHHHHHHhhHhhcCccchhhhhhHHHHhCCChhHcCccceEEEEECC
Confidence 9873 246678888777 6899999999975320 124789999999
Q ss_pred CCcceEEEeeecCCCCC-CccccEEEEECCcEEEEEecCCCCC-ccCceeEEeC--CCCCceEEEcCCCCCCCCcc----
Q 004198 135 NDKFKWHRVVVQGQGPG-PRYGHVMDLVSQRYLVSVSGNDGKR-VLSDAWALDT--AQKPYVWQRLNPEGDRPSAR---- 206 (769)
Q Consensus 135 t~~~~W~~~~~~g~~p~-~R~~hs~~~~~~~~l~v~GG~~~~~-~~~dv~~~d~--~~~~~~W~~v~~~~~~P~~r---- 206 (769)
+ ++|+.+ +++|. +|.+|+++++++ +|||+||..... ...+++.|++ +++ +|+.+.++ |.+|
T Consensus 177 t--~~W~~~---~~~p~~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~y~~~~~~~--~W~~~~~m---~~~r~~~~ 245 (346)
T TIGR03547 177 T--NQWRNL---GENPFLGTAGSAIVHKGN-KLLLINGEIKPGLRTAEVKQYLFTGGKL--EWNKLPPL---PPPKSSSQ 245 (346)
T ss_pred C--CceeEC---ccCCCCcCCCceEEEECC-EEEEEeeeeCCCccchheEEEEecCCCc--eeeecCCC---CCCCCCcc
Confidence 9 779999 47775 788998888876 999999976433 2356777665 555 99999877 3333
Q ss_pred ---cccEEEEecCCEEEEEcccCCCCC----------------cccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe
Q 004198 207 ---MYATASARSDGMFLLCGGRDASGA----------------PLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV 267 (769)
Q Consensus 207 ---~~hsa~~~~~g~l~v~GG~~~~~~----------------~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~ 267 (769)
..|+++ ..+++||++||.+.... .+..+..|+..++ +|.....+ |.+|..++++.+
T Consensus 246 ~~~~~~~a~-~~~~~Iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~e~yd~~~~---~W~~~~~l-p~~~~~~~~~~~ 320 (346)
T TIGR03547 246 EGLAGAFAG-ISNGVLLVAGGANFPGAQENYKNGKLYAHEGLIKAWSSEVYALDNG---KWSKVGKL-PQGLAYGVSVSW 320 (346)
T ss_pred ccccEEeee-EECCEEEEeecCCCCCchhhhhcCCccccCCCCceeEeeEEEecCC---cccccCCC-CCCceeeEEEEc
Confidence 334344 46889999999863210 1234667777766 78888765 788999998889
Q ss_pred CCEEEEEecccCCCCcccCCCcEEEE
Q 004198 268 GARLHVTGGALRGGRAIEGEAAVAVL 293 (769)
Q Consensus 268 ~~~i~V~GG~~~~~~~~~~~~~v~~y 293 (769)
+++|||+||.+..+. ..++++.|
T Consensus 321 ~~~iyv~GG~~~~~~---~~~~v~~~ 343 (346)
T TIGR03547 321 NNGVLLIGGENSGGK---AVTDVYLL 343 (346)
T ss_pred CCEEEEEeccCCCCC---EeeeEEEE
Confidence 999999999865443 24566655
|
Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein. |
| >KOG4152 consensus Host cell transcription factor HCFC1 [Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-26 Score=241.77 Aligned_cols=259 Identities=25% Similarity=0.412 Sum_probs=210.3
Q ss_pred Ccccccceee---cCCCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEE
Q 004198 12 SYRTLETYWD---TDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWT 88 (769)
Q Consensus 12 ~y~~~~~~w~---~~~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~ 88 (769)
.||..+++|. ..+++|.+-..|..++. |.+||+|||..+... .++|+|.+.-..-.|+
T Consensus 61 vYNTatnqWf~PavrGDiPpgcAA~Gfvcd------GtrilvFGGMvEYGk-------------YsNdLYELQasRWeWk 121 (830)
T KOG4152|consen 61 VYNTATNQWFAPAVRGDIPPGCAAFGFVCD------GTRILVFGGMVEYGK-------------YSNDLYELQASRWEWK 121 (830)
T ss_pred hhccccceeecchhcCCCCCchhhcceEec------CceEEEEccEeeecc-------------ccchHHHhhhhhhhHh
Confidence 4899999997 45899999999999998 999999999987764 6899988777777888
Q ss_pred EecC----CCCCCcccccceEEEECCEEEEECccCCC--------CCCcCcEEEEEccC--CcceEEEeeecCCCCCCcc
Q 004198 89 RIRP----AGEPPSPRAAHAAAAVGTMVVFQGGIGPA--------GHSTDDLYVLDLTN--DKFKWHRVVVQGQGPGPRY 154 (769)
Q Consensus 89 ~l~~----~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~--------~~~~~dl~~~d~~t--~~~~W~~~~~~g~~p~~R~ 154 (769)
++.+ .|.+|-||-+|+...++++-|+|||...+ ..++||+|++++.- ..--|....+.|..|.+|.
T Consensus 122 rlkp~~p~nG~pPCPRlGHSFsl~gnKcYlFGGLaNdseDpknNvPrYLnDlY~leL~~Gsgvv~W~ip~t~Gv~P~pRE 201 (830)
T KOG4152|consen 122 RLKPKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNVPRYLNDLYILELRPGSGVVAWDIPITYGVLPPPRE 201 (830)
T ss_pred hcCCCCCCCCCCCCCccCceeEEeccEeEEeccccccccCcccccchhhcceEEEEeccCCceEEEecccccCCCCCCcc
Confidence 8854 46788999999999999999999997422 25689999999983 3456999999999999999
Q ss_pred ccEEEEE-----CCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCC-
Q 004198 155 GHVMDLV-----SQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDAS- 228 (769)
Q Consensus 155 ~hs~~~~-----~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~- 228 (769)
.|+++++ +..++||+||.++- .+.|+|.+|+++- .|.+....+-.|.||.-|+++.+.| +||||||+..-
T Consensus 202 SHTAViY~eKDs~~skmvvyGGM~G~-RLgDLW~Ldl~Tl--~W~kp~~~G~~PlPRSLHsa~~IGn-KMyvfGGWVPl~ 277 (830)
T KOG4152|consen 202 SHTAVIYTEKDSKKSKMVVYGGMSGC-RLGDLWTLDLDTL--TWNKPSLSGVAPLPRSLHSATTIGN-KMYVFGGWVPLV 277 (830)
T ss_pred cceeEEEEeccCCcceEEEEcccccc-cccceeEEeccee--ecccccccCCCCCCcccccceeecc-eeEEecceeeee
Confidence 9999988 23489999999876 4899999999987 9999999999999999999998755 89999998321
Q ss_pred ------------CCcccceEEEecCCCCceEEEeCC------CCCCCcccceEEEEeCCEEEEEecccCCCCcc---cCC
Q 004198 229 ------------GAPLADAYGLLMHRNGQWEWTLAP------GVAPSPRYQHAAVFVGARLHVTGGALRGGRAI---EGE 287 (769)
Q Consensus 229 ------------~~~l~d~~~ld~~~~~~W~W~~~~------~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~---~~~ 287 (769)
+.-.+.+-.++.++. .|+.+- ...|.+|.+|+++.++.+||+-.|+++....- ...
T Consensus 278 ~~~~~~~~hekEWkCTssl~clNldt~---~W~tl~~d~~ed~tiPR~RAGHCAvAigtRlYiWSGRDGYrKAwnnQVCC 354 (830)
T KOG4152|consen 278 MDDVKVATHEKEWKCTSSLACLNLDTM---AWETLLMDTLEDNTIPRARAGHCAVAIGTRLYIWSGRDGYRKAWNNQVCC 354 (830)
T ss_pred ccccccccccceeeeccceeeeeecch---heeeeeeccccccccccccccceeEEeccEEEEEeccchhhHhhccccch
Confidence 123455666777766 565543 33689999999999999999999987533211 125
Q ss_pred CcEEEEECC
Q 004198 288 AAVAVLDTA 296 (769)
Q Consensus 288 ~~v~~yd~~ 296 (769)
.++|.+|++
T Consensus 355 kDlWyLdTe 363 (830)
T KOG4152|consen 355 KDLWYLDTE 363 (830)
T ss_pred hhhhhhccc
Confidence 677777764
|
|
| >KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.5e-27 Score=251.85 Aligned_cols=201 Identities=33% Similarity=0.563 Sum_probs=174.5
Q ss_pred cCHHHHHHHHHHHHHHHhcCCceeeecCC----EEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCC
Q 004198 554 LDSYEVGELCYAAEQIFMQEPTVLQLRAP----VKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQH 629 (769)
Q Consensus 554 ~~~~~~~~l~~~~~~~~~~e~~~l~~~~~----i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~ 629 (769)
+...-...|++.+..+++++|+++++..| +.|+||+|||+.+++++|+..|.|+... .|+|-||+||||..
T Consensus 183 L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~-----~ylfngdfv~rgs~ 257 (476)
T KOG0376|consen 183 LPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETN-----PYLFNGDFVDRGSW 257 (476)
T ss_pred cccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcc-----cccccCceeeeccc
Confidence 44445668999999999999999998754 8999999999999999999999988753 89999999999999
Q ss_pred hHHHHHHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCCCchhhhHHHhHhhccccceEEEeceEEEEcCC
Q 004198 630 SLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGG 709 (769)
Q Consensus 630 s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~f~~lP~~~~i~~~i~~vHgG 709 (769)
|.|++..+++.|+.+|+++|++|||||...++..|||..|+..+|.+ +.+..+.++|.+||++-+++++++.+|||
T Consensus 258 s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyte----~~~~~f~~~f~~LPl~~~i~~~~~~~hgg 333 (476)
T KOG0376|consen 258 SVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYTE----EMFNLFSEVFIWLPLAHLINNKVLVMHGG 333 (476)
T ss_pred ceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhHH----HHHHhhhhhhccccchhhhcCceEEEecC
Confidence 99999999999999999999999999999999999999999999954 56777779999999999999999999999
Q ss_pred CC-CCCCChHHhhhccCCcccCCCccceeceeccCCCCCcccc-cCcceEEeehhhh
Q 004198 710 IG-RSIHSVEQIEKLERPITMDAGSIILMDLLWFVLNISTILR-SMVLYIILFSLKI 764 (769)
Q Consensus 710 i~-~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~~~~~~-~~~~~~~~~~~~~ 764 (769)
+. +.-.++++|++|.|+...++.+ .++|+|||||.+..-.. +-++-+.-||.|+
T Consensus 334 lf~~~~v~l~d~r~i~r~~~~~~~~-~~~~~lws~pq~~~g~s~S~r~~g~~fG~d~ 389 (476)
T KOG0376|consen 334 LFSPDGVTLEDFRNIDRFEQPPEEG-LMCELLWSDPQPANGRSPSKRGVGLQFGPDV 389 (476)
T ss_pred cCCCCCccHHHHHhhhhccCCcccc-cccccccCCCccccCCCccccCceeeeCCCc
Confidence 95 4457899999999995555555 99999999998754443 3356566666654
|
|
| >PHA02790 Kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.5e-24 Score=243.86 Aligned_cols=210 Identities=16% Similarity=0.277 Sum_probs=177.3
Q ss_pred EEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEE
Q 004198 105 AAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWAL 184 (769)
Q Consensus 105 ~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~ 184 (769)
++..++.||++||.+. ....+++++||+.+ ++|..+ .++|.+|..++++++++ .||++||.++. +.+++|
T Consensus 267 ~~~~~~~lyviGG~~~-~~~~~~v~~Ydp~~--~~W~~~---~~m~~~r~~~~~v~~~~-~iYviGG~~~~---~sve~y 336 (480)
T PHA02790 267 STHVGEVVYLIGGWMN-NEIHNNAIAVNYIS--NNWIPI---PPMNSPRLYASGVPANN-KLYVVGGLPNP---TSVERW 336 (480)
T ss_pred eEEECCEEEEEcCCCC-CCcCCeEEEEECCC--CEEEEC---CCCCchhhcceEEEECC-EEEEECCcCCC---CceEEE
Confidence 3458999999999753 34578899999999 779999 58999999999988876 99999997542 679999
Q ss_pred eCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEE
Q 004198 185 DTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAA 264 (769)
Q Consensus 185 d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~ 264 (769)
|+.++ +|+.++++ |.+|..|++++ .+|+||++||.+.. .+.+..||+.++ +|...+.+ |.+|.+|++
T Consensus 337 dp~~n--~W~~~~~l---~~~r~~~~~~~-~~g~IYviGG~~~~---~~~ve~ydp~~~---~W~~~~~m-~~~r~~~~~ 403 (480)
T PHA02790 337 FHGDA--AWVNMPSL---LKPRCNPAVAS-INNVIYVIGGHSET---DTTTEYLLPNHD---QWQFGPST-YYPHYKSCA 403 (480)
T ss_pred ECCCC--eEEECCCC---CCCCcccEEEE-ECCEEEEecCcCCC---CccEEEEeCCCC---EEEeCCCC-CCccccceE
Confidence 99999 99999876 78888777765 58899999998543 367889999887 88888765 789999999
Q ss_pred EEeCCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccCcccccceEEEEeCCEEEEEc
Q 004198 265 VFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYG 344 (769)
Q Consensus 265 ~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~~~~iyv~G 344 (769)
++++++|||+||. +.+||+++++|+.+++++. +|..+++++++++|||+|
T Consensus 404 ~~~~~~IYv~GG~------------~e~ydp~~~~W~~~~~m~~------------------~r~~~~~~v~~~~IYviG 453 (480)
T PHA02790 404 LVFGRRLFLVGRN------------AEFYCESSNTWTLIDDPIY------------------PRDNPELIIVDNKLLLIG 453 (480)
T ss_pred EEECCEEEEECCc------------eEEecCCCCcEeEcCCCCC------------------CccccEEEEECCEEEEEC
Confidence 9999999999982 5789999999999988854 899999999999999999
Q ss_pred CcCCCccccceEEecCCCCcccc
Q 004198 345 GLKGDILLDDFLVAENSPFQSDV 367 (769)
Q Consensus 345 G~~~~~~~~D~~~ld~~~~~~~~ 367 (769)
|.++...++.+.++|..+-+|..
T Consensus 454 G~~~~~~~~~ve~Yd~~~~~W~~ 476 (480)
T PHA02790 454 GFYRGSYIDTIEVYNNRTYSWNI 476 (480)
T ss_pred CcCCCcccceEEEEECCCCeEEe
Confidence 99866667788888888776653
|
|
| >cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.6e-23 Score=209.63 Aligned_cols=152 Identities=47% Similarity=0.739 Sum_probs=121.0
Q ss_pred EEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhhhc
Q 004198 584 KVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINAL 663 (769)
Q Consensus 584 ~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~ 663 (769)
+|||||||++.+|.++|+.++..+.+ .+||||||||||+.+.+++.+++.++.. |.++++||||||.+.++..
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d------~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~ 73 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPND------KLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFL 73 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCC------EEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhh
Confidence 58999999999999999999886555 8999999999999999999999999887 8899999999999998887
Q ss_pred cCCHHHHH-----HHhCCCCchhhhHHHhHhhccccceEEEec-eEEEEcCCCCCCCCChHHhhhccCCcccCCCcccee
Q 004198 664 FGFRLECI-----ERMGENDGIWAWTRFNQLFNCLPLAALIEK-KIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILM 737 (769)
Q Consensus 664 ~g~~~e~~-----~~~~~~~~~~~~~~~~~~f~~lP~~~~i~~-~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~ 737 (769)
.++..+.. ...........+..+.++|..||+++.++. +++|||||+.|.....+++. ..+ ..+...
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~-~~~~~~ 146 (225)
T cd00144 74 YGFYDEDEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEP-EDQLPE 146 (225)
T ss_pred cCCcchhhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCc-ccccce
Confidence 76654321 111111244577788899999999999976 89999999999876555544 111 123678
Q ss_pred ceeccCCCCCcc
Q 004198 738 DLLWFVLNISTI 749 (769)
Q Consensus 738 dllWsdp~~~~~ 749 (769)
+++|++|.....
T Consensus 147 ~~lw~r~~~~~~ 158 (225)
T cd00144 147 DLLWSDPLELPG 158 (225)
T ss_pred eeeecCCCCCCC
Confidence 999999976443
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate |
| >PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.1e-21 Score=199.21 Aligned_cols=131 Identities=22% Similarity=0.393 Sum_probs=98.6
Q ss_pred CEEEEccCCCCHHHHHHHHHHhCCCCCCCC---CcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchh
Q 004198 582 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGD---ITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAA 658 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~~~l~~~~~~~~~~~---~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~ 658 (769)
++.||||||||++.|.++|+.+++...++. ....++|||||||||||+|+|||.+|+++. .+.++++||||||.+
T Consensus 2 ~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~~ 79 (245)
T PRK13625 2 KYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCNK 79 (245)
T ss_pred ceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHHH
Confidence 489999999999999999999887411100 001179999999999999999999999885 346899999999999
Q ss_pred hhhhccCC-------HHHHHHHhCCC---CchhhhHHHhHhhccccceEEEe-ceEEEEcCCCCCCC
Q 004198 659 DINALFGF-------RLECIERMGEN---DGIWAWTRFNQLFNCLPLAALIE-KKIICMHGGIGRSI 714 (769)
Q Consensus 659 ~~~~~~g~-------~~e~~~~~~~~---~~~~~~~~~~~~f~~lP~~~~i~-~~i~~vHgGi~~~~ 714 (769)
.++...+- ..+....|... ....+++.+.++|+.||++..++ ++++|||||+.|..
T Consensus 80 ~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~~ 146 (245)
T PRK13625 80 LYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQDY 146 (245)
T ss_pred HHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChHh
Confidence 88765431 12333334321 12345677899999999998774 57999999998763
|
|
| >cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.1e-20 Score=195.12 Aligned_cols=120 Identities=23% Similarity=0.413 Sum_probs=96.6
Q ss_pred EEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhhh
Q 004198 583 VKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINA 662 (769)
Q Consensus 583 i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~ 662 (769)
++||||||||+.+|.++|+.+++.+..+ .++||||||||||+|+|||.+|++++ .++++|+||||.+.++.
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D-----~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~ 71 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKD-----RLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAV 71 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCC-----EEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHH
Confidence 5899999999999999999998764332 89999999999999999999999986 58999999999998887
Q ss_pred ccCCHH----HHHHHhCCCCchhhhHHHhHhhccccceEEEec-eEEEEcCCCCCCC
Q 004198 663 LFGFRL----ECIERMGENDGIWAWTRFNQLFNCLPLAALIEK-KIICMHGGIGRSI 714 (769)
Q Consensus 663 ~~g~~~----e~~~~~~~~~~~~~~~~~~~~f~~lP~~~~i~~-~i~~vHgGi~~~~ 714 (769)
.+|+.. +....+-. ....+.+.++++.+|++..+++ ++++|||||+|.+
T Consensus 72 ~~g~~~~~~~~t~~~~l~---~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w 125 (257)
T cd07422 72 AAGIKKPKKKDTLDDILN---APDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQW 125 (257)
T ss_pred hcCccccccHhHHHHHHh---ccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCC
Confidence 666431 11111111 1223567899999999998864 7999999999986
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa |
| >TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | Back alignment and domain information |
|---|
Probab=99.83 E-value=2e-20 Score=193.01 Aligned_cols=120 Identities=26% Similarity=0.375 Sum_probs=97.6
Q ss_pred CEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhh
Q 004198 582 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADIN 661 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~ 661 (769)
.++||||||||+++|.++|+++++.+..+ .++||||+|||||+|+|||.++++++ .++++|+||||.+.++
T Consensus 2 ~~YvIGDIHGc~daL~~LL~~i~f~~~~D-----~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~ 72 (279)
T TIGR00668 2 ATYLIGDLHGCYDELQALLERVEFDPGQD-----TLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLA 72 (279)
T ss_pred cEEEEEcccCCHHHHHHHHHHhCcCCCCC-----EEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHH
Confidence 48999999999999999999998765432 79999999999999999999999874 5688999999999998
Q ss_pred hccCCH-----HHHHHHhCCCCchhhhHHHhHhhccccceEEEe-ceEEEEcCCCCCCC
Q 004198 662 ALFGFR-----LECIERMGENDGIWAWTRFNQLFNCLPLAALIE-KKIICMHGGIGRSI 714 (769)
Q Consensus 662 ~~~g~~-----~e~~~~~~~~~~~~~~~~~~~~f~~lP~~~~i~-~~i~~vHgGi~~~~ 714 (769)
..+|+. ++....+. ......+.++++.+|+....+ .++++|||||.|.+
T Consensus 73 ~~~g~~~~~~~d~l~~~l~----a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w 127 (279)
T TIGR00668 73 VFAGISRNKPKDRLDPLLE----APDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQW 127 (279)
T ss_pred HhcCCCccCchHHHHHHHH----ccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCC
Confidence 877752 22211121 123467889999999997664 46999999999986
|
Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. |
| >cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.6e-20 Score=192.28 Aligned_cols=130 Identities=23% Similarity=0.432 Sum_probs=98.7
Q ss_pred CEEEEccCCCCHHHHHHHHHHhCCCCCCC----CCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcch
Q 004198 582 PVKVFGDLHGQFGDLMRLFDEYGFPSTAG----DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEA 657 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~~~l~~~~~~~~~~----~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~ 657 (769)
+|.||||||||+.+|+++|+.+++.+++. .....+++|||||||||++|.|||.+|++++.. .++++||||||.
T Consensus 2 ~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~~--~~~~~v~GNHE~ 79 (234)
T cd07423 2 PFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVAA--GAALCVPGNHDN 79 (234)
T ss_pred CeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhhC--CcEEEEECCcHH
Confidence 68999999999999999999998764320 000117999999999999999999999998754 579999999999
Q ss_pred hhhhhccCCH-------HHHHHHhCCCCchhhhHHHhHhhccccceEEEe-ceEEEEcCCCCCCC
Q 004198 658 ADINALFGFR-------LECIERMGENDGIWAWTRFNQLFNCLPLAALIE-KKIICMHGGIGRSI 714 (769)
Q Consensus 658 ~~~~~~~g~~-------~e~~~~~~~~~~~~~~~~~~~~f~~lP~~~~i~-~~i~~vHgGi~~~~ 714 (769)
+.++...+.. .+....|... ...+.+.+.++|+.||+...++ ++++|||||+.+.+
T Consensus 80 ~l~~~~~~~~~~~~~~~~~t~~~~~~~-~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~~ 143 (234)
T cd07423 80 KLYRKLQGRNVKITHGLEETVAQLEAE-SEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEEM 143 (234)
T ss_pred HHHHHhcCCCccccCcccchHHHHhhc-cHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChHh
Confidence 9887654311 1222333211 2345677889999999998875 47999999987653
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp |
| >cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.3e-20 Score=187.88 Aligned_cols=125 Identities=22% Similarity=0.330 Sum_probs=93.1
Q ss_pred EEEccCCCCHHHHHHHHHHhCCCCCCCC--CcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhh
Q 004198 584 KVFGDLHGQFGDLMRLFDEYGFPSTAGD--ITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADIN 661 (769)
Q Consensus 584 ~viGDiHG~~~~l~~~l~~~~~~~~~~~--~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~ 661 (769)
+||||||||++.|.++|+.+++....+. .....+|||||||||||+|.|||.+|++++.. .++++|+||||.+.+.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~~--~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVDA--GHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhcC--CCEEEEEccCcHHHHH
Confidence 6999999999999999999887532100 00118999999999999999999999998643 4899999999999876
Q ss_pred hccCC-H----------------HHHHHHhCCCCchhhhHHHhHhhccccceEEEeceEEEEcCCCCCC
Q 004198 662 ALFGF-R----------------LECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRS 713 (769)
Q Consensus 662 ~~~g~-~----------------~e~~~~~~~~~~~~~~~~~~~~f~~lP~~~~i~~~i~~vHgGi~~~ 713 (769)
...+. . .+..+.+.. ....++.+.++|+.||++... ++++|||||+.+.
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~lP~~~~~-~~~~~VHAg~~~~ 145 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFRE--HSEEHKDWLEWFKTLPLFLDL-GGVRVVHACWDET 145 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhc--cchhHHHHHHHHhcCCcEEEE-CCEEEEECCcCHh
Confidence 54321 0 112222221 123457788999999999887 5799999998633
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of |
| >PRK11439 pphA serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.1e-19 Score=185.49 Aligned_cols=120 Identities=26% Similarity=0.363 Sum_probs=90.4
Q ss_pred CCEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhh
Q 004198 581 APVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADI 660 (769)
Q Consensus 581 ~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~ 660 (769)
.+++||||||||+..|+++|+.+++.+..+ +++||||||||||+|.|||.+|.+ .++++|+||||.+.+
T Consensus 17 ~ri~vigDIHG~~~~L~~lL~~i~~~~~~D-----~li~lGDlvDrGp~s~~vl~~l~~------~~~~~v~GNHE~~~l 85 (218)
T PRK11439 17 RHIWLVGDIHGCFEQLMRKLRHCRFDPWRD-----LLISVGDLIDRGPQSLRCLQLLEE------HWVRAVRGNHEQMAL 85 (218)
T ss_pred CeEEEEEcccCCHHHHHHHHHhcCCCcccC-----EEEEcCcccCCCcCHHHHHHHHHc------CCceEeeCchHHHHH
Confidence 379999999999999999999998763332 799999999999999999999975 368899999999998
Q ss_pred hhccCCHHHHHHHhCC-------CCchhhhHHHhHhhccccceEEEe---ceEEEEcCCCC
Q 004198 661 NALFGFRLECIERMGE-------NDGIWAWTRFNQLFNCLPLAALIE---KKIICMHGGIG 711 (769)
Q Consensus 661 ~~~~g~~~e~~~~~~~-------~~~~~~~~~~~~~f~~lP~~~~i~---~~i~~vHgGi~ 711 (769)
+...+.....+...+. ......+..+.++++.||+...++ +++++||||+.
T Consensus 86 ~~~~~~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p 146 (218)
T PRK11439 86 DALASQQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYP 146 (218)
T ss_pred HHHHCCccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCC
Confidence 7653321111111110 011223456668999999998764 57999999983
|
|
| >cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.8e-20 Score=188.58 Aligned_cols=159 Identities=24% Similarity=0.312 Sum_probs=109.6
Q ss_pred CEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCC-ceEEecCCcchhhh
Q 004198 582 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPE-NVHLIRGNHEAADI 660 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~-~v~llrGNHE~~~~ 660 (769)
.+++||||||+++.|.++|+.+.............+|||||||||||+|.+|+.+|++++..+|. ++++||||||.+++
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~l 82 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAFA 82 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHHH
Confidence 58999999999999999998765321100001126999999999999999999999999998876 68999999998876
Q ss_pred hhccCC---------H------------------------------------------------------HHHHHHhCCC
Q 004198 661 NALFGF---------R------------------------------------------------------LECIERMGEN 677 (769)
Q Consensus 661 ~~~~g~---------~------------------------------------------------------~e~~~~~~~~ 677 (769)
..+... . .+...-|+-.
T Consensus 83 ~fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYGv~ 162 (304)
T cd07421 83 AFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGVP 162 (304)
T ss_pred hHhhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHHHHcCCC
Confidence 654321 1 0111111111
Q ss_pred Cchh-----hhHHHhHhhccccceEEEeceE-------------EEEcCCCCCCCCChHHhhhcc-CCcccCCCccceec
Q 004198 678 DGIW-----AWTRFNQLFNCLPLAALIEKKI-------------ICMHGGIGRSIHSVEQIEKLE-RPITMDAGSIILMD 738 (769)
Q Consensus 678 ~~~~-----~~~~~~~~f~~lP~~~~i~~~i-------------~~vHgGi~~~~~~~~~i~~~~-rp~~~~~~~~~~~d 738 (769)
.+.. +-....+|++.||.....+ .+ +|||||+.|.+.--+|.+.+. +-+.. .-.|
T Consensus 163 ~~~~~l~~avP~~H~~fl~~l~~~~~~~-~~~~~~~~g~~~~~lifVHAGlrPg~pLe~Q~~~L~~~d~~~-----p~~~ 236 (304)
T cd07421 163 HGSSDLIKAVPEEHKKFLRNLVWVHEED-DVCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKLLRTKDTSI-----PKIA 236 (304)
T ss_pred cchHHHHHhCCHHHHHHHHhCCceEEeC-cccccccccccccceEEEEcccCCCCChHHhhhhhhcccccc-----cccc
Confidence 1101 1134678899999987764 35 999999999987777776653 21222 2348
Q ss_pred eeccCCCC
Q 004198 739 LLWFVLNI 746 (769)
Q Consensus 739 llWsdp~~ 746 (769)
+||.+...
T Consensus 237 ~l~~R~~f 244 (304)
T cd07421 237 PLSGRKNV 244 (304)
T ss_pred ccccchhh
Confidence 88888753
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol |
| >PRK00166 apaH diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.2e-19 Score=186.45 Aligned_cols=121 Identities=22% Similarity=0.412 Sum_probs=96.2
Q ss_pred CEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhh
Q 004198 582 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADIN 661 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~ 661 (769)
.++||||||||+..|.++|+.+++.+..+ .++||||||||||+|+||+.+|+++. .++++|+||||.+.+.
T Consensus 2 ~~~vIGDIHG~~~~l~~ll~~~~~~~~~D-----~li~lGDlVdrGp~s~~vl~~l~~l~----~~~~~VlGNHD~~ll~ 72 (275)
T PRK00166 2 ATYAIGDIQGCYDELQRLLEKIDFDPAKD-----TLWLVGDLVNRGPDSLEVLRFVKSLG----DSAVTVLGNHDLHLLA 72 (275)
T ss_pred cEEEEEccCCCHHHHHHHHHhcCCCCCCC-----EEEEeCCccCCCcCHHHHHHHHHhcC----CCeEEEecChhHHHHH
Confidence 38999999999999999999998754332 79999999999999999999999873 5799999999999888
Q ss_pred hccCCHH----HHHHHhCCCCchhhhHHHhHhhccccceEEE-eceEEEEcCCCCCCC
Q 004198 662 ALFGFRL----ECIERMGENDGIWAWTRFNQLFNCLPLAALI-EKKIICMHGGIGRSI 714 (769)
Q Consensus 662 ~~~g~~~----e~~~~~~~~~~~~~~~~~~~~f~~lP~~~~i-~~~i~~vHgGi~~~~ 714 (769)
..+|+.. +....+-. ....+.+.++++.||+...+ ++++++||||+.|.+
T Consensus 73 ~~~g~~~~~~~~~l~~~l~---~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~ 127 (275)
T PRK00166 73 VAAGIKRNKKKDTLDPILE---APDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQW 127 (275)
T ss_pred hhcCCccccchhHHHHHHc---cccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCC
Confidence 7766431 11122211 12345678899999998876 468999999999986
|
|
| >cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.6e-18 Score=175.74 Aligned_cols=149 Identities=27% Similarity=0.354 Sum_probs=105.6
Q ss_pred CCEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhh
Q 004198 581 APVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADI 660 (769)
Q Consensus 581 ~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~ 660 (769)
++++|||||||++.+|.++++..++.+..+ .++|+|||||||+++.|++.+|.. .++++|+||||.+.+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d-----~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~ 69 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARD-----RLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAI 69 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCC-----EEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHH
Confidence 368999999999999999999987643221 789999999999999999999875 378999999999988
Q ss_pred hhccC--CHHHHHHHhCCCC-----chhhhHHHhHhhccccceEEEe---ceEEEEcCCCCCCCCChHHhhhccCCcccC
Q 004198 661 NALFG--FRLECIERMGEND-----GIWAWTRFNQLFNCLPLAALIE---KKIICMHGGIGRSIHSVEQIEKLERPITMD 730 (769)
Q Consensus 661 ~~~~g--~~~e~~~~~~~~~-----~~~~~~~~~~~f~~lP~~~~i~---~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~ 730 (769)
....+ ...+.+.+.+... ....++.+.++|+.||++..++ .+++|||||+.+.. ....+.. .+.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~-~~~~~~~--~~~--- 143 (207)
T cd07424 70 DALRAEPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDD-WSDGVGA--VTL--- 143 (207)
T ss_pred hHhhCCCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcch-hhhhhhc--ccc---
Confidence 87654 2233433333220 1114455788999999998875 47999999996542 1111110 111
Q ss_pred CCccceeceeccCCCCC
Q 004198 731 AGSIILMDLLWFVLNIS 747 (769)
Q Consensus 731 ~~~~~~~dllWsdp~~~ 747 (769)
......+++|++|...
T Consensus 144 -~~~~~~~~~w~~~~~~ 159 (207)
T cd07424 144 -RPEDIEELLWSRTRIQ 159 (207)
T ss_pred -Ccccceeeeeccchhh
Confidence 1124578999987643
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all |
| >PHA02239 putative protein phosphatase | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.2e-18 Score=178.51 Aligned_cols=140 Identities=24% Similarity=0.378 Sum_probs=101.3
Q ss_pred CEEEEccCCCCHHHHHHHHHHhCCC--CCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhh
Q 004198 582 PVKVFGDLHGQFGDLMRLFDEYGFP--STAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAAD 659 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~~~l~~~~~~--~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~ 659 (769)
.+++||||||++..|.++++.+... +.+ .+||||||||||++|.+++.+|+.++. .+.++++|+||||.+.
T Consensus 2 ~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d------~li~lGD~iDrG~~s~~v~~~l~~~~~-~~~~~~~l~GNHE~~~ 74 (235)
T PHA02239 2 AIYVVPDIHGEYQKLLTIMDKINNERKPEE------TIVFLGDYVDRGKRSKDVVNYIFDLMS-NDDNVVTLLGNHDDEF 74 (235)
T ss_pred eEEEEECCCCCHHHHHHHHHHHhhcCCCCC------EEEEecCcCCCCCChHHHHHHHHHHhh-cCCCeEEEECCcHHHH
Confidence 4799999999999999999987533 222 799999999999999999999998754 3568999999999987
Q ss_pred hhhccCCH--------------HHHHHHhCCCCc---------------------------hhhhHHHhHhhccccceEE
Q 004198 660 INALFGFR--------------LECIERMGENDG---------------------------IWAWTRFNQLFNCLPLAAL 698 (769)
Q Consensus 660 ~~~~~g~~--------------~e~~~~~~~~~~---------------------------~~~~~~~~~~f~~lP~~~~ 698 (769)
++...+.. .+.+..|+.... ...+..+.++++.||++..
T Consensus 75 l~~~~~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~ 154 (235)
T PHA02239 75 YNIMENVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYK 154 (235)
T ss_pred HHHHhCchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEE
Confidence 76542111 122334432100 0122445668899999988
Q ss_pred EeceEEEEcCCCCCCCCChHHhhhccCCcccCCCccceeceeccCC
Q 004198 699 IEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWFVL 744 (769)
Q Consensus 699 i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp 744 (769)
.+ +++|||||+.|.. |++. +...+++|.+.
T Consensus 155 ~~-~~ifVHAGi~p~~-----------~~~~----q~~~~llWiR~ 184 (235)
T PHA02239 155 ED-KYIFSHSGGVSWK-----------PVEE----QTIDQLIWSRD 184 (235)
T ss_pred EC-CEEEEeCCCCCCC-----------Chhh----CCHhHeEEecc
Confidence 85 6999999998762 2221 13468999986
|
|
| >PRK09968 serine/threonine-specific protein phosphatase 2; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=9.2e-18 Score=170.93 Aligned_cols=120 Identities=25% Similarity=0.304 Sum_probs=87.3
Q ss_pred CCEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhh
Q 004198 581 APVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADI 660 (769)
Q Consensus 581 ~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~ 660 (769)
++++||||||||+..|+++|+.+.+.+..+ .++||||||||||+|.||+.+|.+ .++++||||||.+.+
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~~~~d-----~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~ 83 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFCPETD-----LLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMAL 83 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCCCCCC-----EEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHH
Confidence 489999999999999999999987554332 789999999999999999999864 378999999999988
Q ss_pred hhccCCHHHHHHHhCCC-----C--chhhhHHHhHhhccccceEEEe---ceEEEEcCCCC
Q 004198 661 NALFGFRLECIERMGEN-----D--GIWAWTRFNQLFNCLPLAALIE---KKIICMHGGIG 711 (769)
Q Consensus 661 ~~~~g~~~e~~~~~~~~-----~--~~~~~~~~~~~f~~lP~~~~i~---~~i~~vHgGi~ 711 (769)
+....-....+...+.. . .........++++.||+...+. .++++||||+.
T Consensus 84 ~~~~~~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 84 DAFETGDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred HHHhcCChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 76532111111111100 0 0112233456899999998764 46999999983
|
|
| >cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.6e-18 Score=171.77 Aligned_cols=130 Identities=23% Similarity=0.408 Sum_probs=93.1
Q ss_pred EEEccCCCCHHHHHHHHHHhCCCCCCCCC--cceeEEEeccccCCCCChHHHHHHHHHhhhc---CCCceEEecCCcchh
Q 004198 584 KVFGDLHGQFGDLMRLFDEYGFPSTAGDI--TYIDYLFLGDYVDRGQHSLETITLLLALKIE---YPENVHLIRGNHEAA 658 (769)
Q Consensus 584 ~viGDiHG~~~~l~~~l~~~~~~~~~~~~--~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~---~p~~v~llrGNHE~~ 658 (769)
+||||||||+.+|.++|+..++...+..+ ....+||+||+||||+++.||+.+|+.|+.+ .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 58999999999999999998864321111 1128999999999999999999999999854 456899999999999
Q ss_pred hhhhccCCHH-HHHHHhCCC--Cchhhh---HHHhHhhccccceEEEeceEEEEcCCCCCCC
Q 004198 659 DINALFGFRL-ECIERMGEN--DGIWAW---TRFNQLFNCLPLAALIEKKIICMHGGIGRSI 714 (769)
Q Consensus 659 ~~~~~~g~~~-e~~~~~~~~--~~~~~~---~~~~~~f~~lP~~~~i~~~i~~vHgGi~~~~ 714 (769)
.++..+.+.. +....+... .....+ ..+.++++.||+...++ +++|||||++|.+
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~-~~~fvHag~~~~w 141 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVN-DTLFVHGGLGPLW 141 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEEC-CEEEEeCCcHHHH
Confidence 9875443221 111111000 000111 24578899999999886 5999999996643
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal |
| >COG3055 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=99.73 E-value=7.3e-16 Score=159.01 Aligned_cols=284 Identities=18% Similarity=0.224 Sum_probs=214.0
Q ss_pred ecCCCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCC--CcEEEecCCCCCCc
Q 004198 21 DTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLT--RKWTRIRPAGEPPS 98 (769)
Q Consensus 21 ~~~~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~--~~W~~l~~~g~~P~ 98 (769)
...+++|.+-.+-+...+ ++.+||-=|.. -...|.+|+.. ..|+++... |-.
T Consensus 28 ~~lPdlPvg~KnG~Ga~i------g~~~YVGLGs~------------------G~afy~ldL~~~~k~W~~~a~F--pG~ 81 (381)
T COG3055 28 GQLPDLPVGFKNGAGALI------GDTVYVGLGSA------------------GTAFYVLDLKKPGKGWTKIADF--PGG 81 (381)
T ss_pred ccCCCCCcccccccccee------cceEEEEeccC------------------CccceehhhhcCCCCceEcccC--CCc
Confidence 467888999888888888 88999877732 35688888875 479999876 346
Q ss_pred ccccceEEEECCEEEEECccCCC----CCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCC
Q 004198 99 PRAAHAAAAVGTMVVFQGGIGPA----GHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDG 174 (769)
Q Consensus 99 ~R~~hs~~~~~~~Iyv~GG~~~~----~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~ 174 (769)
+|....++.++++||||||.+.. ...++|+|+||+.+ ++|+++.+ ..|..-.+|+++...+..++++||.+.
T Consensus 82 ~rnqa~~a~~~~kLyvFgG~Gk~~~~~~~~~nd~Y~y~p~~--nsW~kl~t--~sP~gl~G~~~~~~~~~~i~f~GGvn~ 157 (381)
T COG3055 82 ARNQAVAAVIGGKLYVFGGYGKSVSSSPQVFNDAYRYDPST--NSWHKLDT--RSPTGLVGASTFSLNGTKIYFFGGVNQ 157 (381)
T ss_pred ccccchheeeCCeEEEeeccccCCCCCceEeeeeEEecCCC--Chhheecc--ccccccccceeEecCCceEEEEccccH
Confidence 89999999999999999997633 24579999999999 77999985 567778999999999889999999641
Q ss_pred ----------------------------------CCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEE
Q 004198 175 ----------------------------------KRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFL 220 (769)
Q Consensus 175 ----------------------------------~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~ 220 (769)
.....+|+.|++.++ .|+.+-.. |..-.+.+++++.++++.
T Consensus 158 ~if~~yf~dv~~a~~d~~~~~~i~~~yf~~~~~dy~~n~ev~sy~p~~n--~W~~~G~~---pf~~~aGsa~~~~~n~~~ 232 (381)
T COG3055 158 NIFNGYFEDVGAAGKDKEAVDKIIAHYFDKKAEDYFFNKEVLSYDPSTN--QWRNLGEN---PFYGNAGSAVVIKGNKLT 232 (381)
T ss_pred HhhhhhHHhhhhhcccHHHHHHHHHHHhCCCHHHhcccccccccccccc--hhhhcCcC---cccCccCcceeecCCeEE
Confidence 113567889999999 89887543 544445577778888888
Q ss_pred EEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccce---EEE---EeCCEEEEEecccCCCC------------
Q 004198 221 LCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQH---AAV---FVGARLHVTGGALRGGR------------ 282 (769)
Q Consensus 221 v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~h---s~~---~~~~~i~V~GG~~~~~~------------ 282 (769)
++-|.--.+.+...++.++...+ .-+|...+..++..-..+ +-+ ..++.++|.||.+-.+.
T Consensus 233 lInGEiKpGLRt~~~k~~~~~~~-~~~w~~l~~lp~~~~~~~eGvAGaf~G~s~~~~lv~GGAnF~Ga~~~y~~Gk~~AH 311 (381)
T COG3055 233 LINGEIKPGLRTAEVKQADFGGD-NLKWLKLSDLPAPIGSNKEGVAGAFSGKSNGEVLVAGGANFPGALKAYKNGKFYAH 311 (381)
T ss_pred EEcceecCCccccceeEEEeccC-ceeeeeccCCCCCCCCCccccceeccceeCCeEEEecCCCChhHHHHHHhcccccc
Confidence 88888777777788888887633 457777765543333322 222 34788999999863221
Q ss_pred ---cccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccCcccccceEEEEeCCEEEEEcCcC-CCccccceEEe
Q 004198 283 ---AIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLK-GDILLDDFLVA 358 (769)
Q Consensus 283 ---~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~~~~iyv~GG~~-~~~~~~D~~~l 358 (769)
......+|++|| .+.|+.+..++. .++...++..++.||++||-. +...+..++.+
T Consensus 312 ~Gl~K~w~~~Vy~~d--~g~Wk~~GeLp~------------------~l~YG~s~~~nn~vl~IGGE~~~Gka~~~v~~l 371 (381)
T COG3055 312 EGLSKSWNSEVYIFD--NGSWKIVGELPQ------------------GLAYGVSLSYNNKVLLIGGETSGGKATTRVYSL 371 (381)
T ss_pred cchhhhhhceEEEEc--CCceeeecccCC------------------CccceEEEecCCcEEEEccccCCCeeeeeEEEE
Confidence 112256788888 899999998855 889999999999999999965 44666777655
Q ss_pred cC
Q 004198 359 EN 360 (769)
Q Consensus 359 d~ 360 (769)
-.
T Consensus 372 ~~ 373 (381)
T COG3055 372 SW 373 (381)
T ss_pred EE
Confidence 43
|
|
| >KOG2437 consensus Muskelin [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.6e-18 Score=181.74 Aligned_cols=315 Identities=17% Similarity=0.253 Sum_probs=217.4
Q ss_pred CCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccccce
Q 004198 25 DAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHA 104 (769)
Q Consensus 25 ~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs 104 (769)
.-|..|.||.|+..++ ++.||++||+++.+. ..|+|.|+...+.|..+...+..|-.|+.|-
T Consensus 256 ~~p~~RgGHQMV~~~~----~~CiYLYGGWdG~~~--------------l~DFW~Y~v~e~~W~~iN~~t~~PG~RsCHR 317 (723)
T KOG2437|consen 256 NRPGMRGGHQMVIDVQ----TECVYLYGGWDGTQD--------------LADFWAYSVKENQWTCINRDTEGPGARSCHR 317 (723)
T ss_pred cCccccCcceEEEeCC----CcEEEEecCcccchh--------------HHHHHhhcCCcceeEEeecCCCCCcchhhhh
Confidence 4678899999999854 569999999998774 6899999999999999988888899999999
Q ss_pred EEEECC--EEEEECccCCC-----CCCcCcEEEEEccCCcceEEEeeec---CCCCCCccccEEEEECCc-EEEEEecCC
Q 004198 105 AAAVGT--MVVFQGGIGPA-----GHSTDDLYVLDLTNDKFKWHRVVVQ---GQGPGPRYGHVMDLVSQR-YLVSVSGND 173 (769)
Q Consensus 105 ~~~~~~--~Iyv~GG~~~~-----~~~~~dl~~~d~~t~~~~W~~~~~~---g~~p~~R~~hs~~~~~~~-~l~v~GG~~ 173 (769)
|+.... ++|+.|-.-+. ...-.|+|+||..+ +.|.-+.-. ...|...+.|.|++.+++ .+||+||..
T Consensus 318 MVid~S~~KLYLlG~Y~~sS~r~~~s~RsDfW~FDi~~--~~W~~ls~dt~~dGGP~~vfDHqM~Vd~~k~~iyVfGGr~ 395 (723)
T KOG2437|consen 318 MVIDISRRKLYLLGRYLDSSVRNSKSLRSDFWRFDIDT--NTWMLLSEDTAADGGPKLVFDHQMCVDSEKHMIYVFGGRI 395 (723)
T ss_pred hhhhhhHhHHhhhhhccccccccccccccceEEEecCC--ceeEEecccccccCCcceeecceeeEecCcceEEEecCee
Confidence 999865 99999974222 13357999999999 679888642 247999999999988764 599999974
Q ss_pred C--C-CccCceeEEeCCCCCceEEEcCCCC-------CCCCcccccEEEEe-cCCEEEEEcccCCCCCcccceEEEecCC
Q 004198 174 G--K-RVLSDAWALDTAQKPYVWQRLNPEG-------DRPSARMYATASAR-SDGMFLLCGGRDASGAPLADAYGLLMHR 242 (769)
Q Consensus 174 ~--~-~~~~dv~~~d~~~~~~~W~~v~~~~-------~~P~~r~~hsa~~~-~~g~l~v~GG~~~~~~~l~d~~~ld~~~ 242 (769)
- . ..+..+|.||+... .|..+...- +--..|.+|++-.. .+.++|+|||.....+ ++=.+.|++..
T Consensus 396 ~~~~e~~f~GLYaf~~~~~--~w~~l~e~~~~~~~vvE~~~sR~ghcmE~~~~n~~ly~fggq~s~~E-l~L~f~y~I~~ 472 (723)
T KOG2437|consen 396 LTCNEPQFSGLYAFNCQCQ--TWKLLREDSCNAGPVVEDIQSRIGHCMEFHSKNRCLYVFGGQRSKTE-LNLFFSYDIDS 472 (723)
T ss_pred ccCCCccccceEEEecCCc--cHHHHHHHHhhcCcchhHHHHHHHHHHHhcCCCCeEEeccCcccceE-Eeehhcceecc
Confidence 3 2 35788999999988 887664321 11246888888765 4569999999765533 44445554432
Q ss_pred CCceEE---Ee-CCCCCCCcccceEEEE--eCCEEEEEecccCCCCcc--cCCCcEEEEECCCCcEEeccCCccCCCC--
Q 004198 243 NGQWEW---TL-APGVAPSPRYQHAAVF--VGARLHVTGGALRGGRAI--EGEAAVAVLDTAAGVWLDRNGLVTSSRT-- 312 (769)
Q Consensus 243 ~~~W~W---~~-~~~~~P~~R~~hs~~~--~~~~i~V~GG~~~~~~~~--~~~~~v~~yd~~t~~W~~~~~~~~~~~~-- 312 (769)
.+.-.- ++ .+.+.|++-+...+.. -...|++.-|.+...... .-.+++|+|+..++.|.++..+..-+..
T Consensus 473 E~~~~~s~~~k~dsS~~pS~~f~qRs~~dp~~~~i~~~~G~~~~~~~~e~~~rns~wi~~i~~~~w~cI~~I~~~~~d~d 552 (723)
T KOG2437|consen 473 EHVDIISDGTKKDSSMVPSTGFTQRATIDPELNEIHVLSGLSKDKEKREENVRNSFWIYDIVRNSWSCIYKIDQAAKDND 552 (723)
T ss_pred ccchhhhccCcCccccCCCcchhhhcccCCCCcchhhhcccchhccCccccccCcEEEEEecccchhhHhhhHHhhccCC
Confidence 210000 00 1122233322222111 145677666654322111 1267899999999999988665432211
Q ss_pred ----CCCCCCCCCccCcccccceEEEEe--CCEEEEEcCcCCC-----ccccceEEecCCC
Q 004198 313 ----SKGHGEHDPSLELMRRCRHASASI--GVRIYIYGGLKGD-----ILLDDFLVAENSP 362 (769)
Q Consensus 313 ----~~~~~~~~~~~~~~~R~~hs~~~~--~~~iyv~GG~~~~-----~~~~D~~~ld~~~ 362 (769)
.....+.+...++.+|++|+.++. ..-+|.+||+.+. ..++|+|.++.-.
T Consensus 553 tvfsvpFp~ks~~~~~~~~rf~h~~~~dL~~~~~yl~Ggn~~~~~~~~m~l~dfW~l~I~r 613 (723)
T KOG2437|consen 553 TVFSVPFPTKSLQEEEPCPRFAHQLVYDLLHKVHYLFGGNPGKSCSPKMRLDDFWSLKICR 613 (723)
T ss_pred ceeeccCCcccccceeccccchhHHHHHHhhhhhhhhcCCCCCCCCchhhhhhHHHHhhcc
Confidence 111224456678899999987765 4568999999764 5678999877554
|
|
| >COG3055 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=99.57 E-value=6.9e-14 Score=144.52 Aligned_cols=241 Identities=19% Similarity=0.319 Sum_probs=173.6
Q ss_pred cccceeecCCCCCC-CccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCC
Q 004198 15 TLETYWDTDEDAPG-PRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPA 93 (769)
Q Consensus 15 ~~~~~w~~~~~~P~-~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~ 93 (769)
-....|+..+..|. +|.+..++++ +++||+|||....... ...+.+|+|+||+.+++|+++.+.
T Consensus 67 ~~~k~W~~~a~FpG~~rnqa~~a~~------~~kLyvFgG~Gk~~~~---------~~~~~nd~Y~y~p~~nsW~kl~t~ 131 (381)
T COG3055 67 KPGKGWTKIADFPGGARNQAVAAVI------GGKLYVFGGYGKSVSS---------SPQVFNDAYRYDPSTNSWHKLDTR 131 (381)
T ss_pred cCCCCceEcccCCCcccccchheee------CCeEEEeeccccCCCC---------CceEeeeeEEecCCCChhheeccc
Confidence 33467999999995 6999999999 9999999998765541 123789999999999999999876
Q ss_pred CCCCcccccceEEEECC-EEEEECccCCC---------------------------------CCCcCcEEEEEccCCcce
Q 004198 94 GEPPSPRAAHAAAAVGT-MVVFQGGIGPA---------------------------------GHSTDDLYVLDLTNDKFK 139 (769)
Q Consensus 94 g~~P~~R~~hs~~~~~~-~Iyv~GG~~~~---------------------------------~~~~~dl~~~d~~t~~~~ 139 (769)
.|....+++++..++ +||++||.+.. -....+++.|++.+ ++
T Consensus 132 --sP~gl~G~~~~~~~~~~i~f~GGvn~~if~~yf~dv~~a~~d~~~~~~i~~~yf~~~~~dy~~n~ev~sy~p~~--n~ 207 (381)
T COG3055 132 --SPTGLVGASTFSLNGTKIYFFGGVNQNIFNGYFEDVGAAGKDKEAVDKIIAHYFDKKAEDYFFNKEVLSYDPST--NQ 207 (381)
T ss_pred --cccccccceeEecCCceEEEEccccHHhhhhhHHhhhhhcccHHHHHHHHHHHhCCCHHHhccccccccccccc--ch
Confidence 466688899999987 99999997421 01236789999999 77
Q ss_pred EEEeeecCCC-CCCccccEEEEECCcEEEEEecCCC-CCccCceeEEeCCCCCceEEEcCCCCCCCC---cccccEEEEe
Q 004198 140 WHRVVVQGQG-PGPRYGHVMDLVSQRYLVSVSGNDG-KRVLSDAWALDTAQKPYVWQRLNPEGDRPS---ARMYATASAR 214 (769)
Q Consensus 140 W~~~~~~g~~-p~~R~~hs~~~~~~~~l~v~GG~~~-~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~---~r~~hsa~~~ 214 (769)
|..+ |.. -.+++|.+. +.+++.+.++-|.-. .-....++.++...+..+|.++.....+.. .....+....
T Consensus 208 W~~~---G~~pf~~~aGsa~-~~~~n~~~lInGEiKpGLRt~~~k~~~~~~~~~~w~~l~~lp~~~~~~~eGvAGaf~G~ 283 (381)
T COG3055 208 WRNL---GENPFYGNAGSAV-VIKGNKLTLINGEIKPGLRTAEVKQADFGGDNLKWLKLSDLPAPIGSNKEGVAGAFSGK 283 (381)
T ss_pred hhhc---CcCcccCccCcce-eecCCeEEEEcceecCCccccceeEEEeccCceeeeeccCCCCCCCCCccccceeccce
Confidence 9988 644 456677444 666556666666533 334567788888777779999966522111 1111222234
Q ss_pred cCCEEEEEcccCCC------------------CCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEEEec
Q 004198 215 SDGMFLLCGGRDAS------------------GAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGG 276 (769)
Q Consensus 215 ~~g~l~v~GG~~~~------------------~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG 276 (769)
.++.+++.||.+-. ..+.+++|.|+. + .|..+ +..|.++..-.++..++.||++||
T Consensus 284 s~~~~lv~GGAnF~Ga~~~y~~Gk~~AH~Gl~K~w~~~Vy~~d~---g--~Wk~~-GeLp~~l~YG~s~~~nn~vl~IGG 357 (381)
T COG3055 284 SNGEVLVAGGANFPGALKAYKNGKFYAHEGLSKSWNSEVYIFDN---G--SWKIV-GELPQGLAYGVSLSYNNKVLLIGG 357 (381)
T ss_pred eCCeEEEecCCCChhHHHHHHhcccccccchhhhhhceEEEEcC---C--ceeee-cccCCCccceEEEecCCcEEEEcc
Confidence 67788888886432 134678899983 3 55555 455778888888889999999999
Q ss_pred ccCCCCcc
Q 004198 277 ALRGGRAI 284 (769)
Q Consensus 277 ~~~~~~~~ 284 (769)
.+.++...
T Consensus 358 E~~~Gka~ 365 (381)
T COG3055 358 ETSGGKAT 365 (381)
T ss_pred ccCCCeee
Confidence 98877643
|
|
| >KOG2437 consensus Muskelin [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.3e-14 Score=151.04 Aligned_cols=205 Identities=20% Similarity=0.336 Sum_probs=155.5
Q ss_pred ceEEEeeecC-------CCCCCccccEEEEEC-CcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCccccc
Q 004198 138 FKWHRVVVQG-------QGPGPRYGHVMDLVS-QRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYA 209 (769)
Q Consensus 138 ~~W~~~~~~g-------~~p~~R~~hs~~~~~-~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~h 209 (769)
.+|.+++... ..|..|.||.|+... ...+|++||++|.+.+.|.|.|+...+ .|+.+...+..|..|.+|
T Consensus 239 ~~W~~i~~~~~~~~~~~~~p~~RgGHQMV~~~~~~CiYLYGGWdG~~~l~DFW~Y~v~e~--~W~~iN~~t~~PG~RsCH 316 (723)
T KOG2437|consen 239 PRWSQIIPKSTKGDGEDNRPGMRGGHQMVIDVQTECVYLYGGWDGTQDLADFWAYSVKEN--QWTCINRDTEGPGARSCH 316 (723)
T ss_pred ccccccCchhhcccccccCccccCcceEEEeCCCcEEEEecCcccchhHHHHHhhcCCcc--eeEEeecCCCCCcchhhh
Confidence 5798887543 579999999997653 349999999999999999999999988 999999888899999999
Q ss_pred EEEEe-cCCEEEEEcccCCCC-----CcccceEEEecCCCCceEEEeCC-----CCCCCcccceEEEEeCCE--EEEEec
Q 004198 210 TASAR-SDGMFLLCGGRDASG-----APLADAYGLLMHRNGQWEWTLAP-----GVAPSPRYQHAAVFVGAR--LHVTGG 276 (769)
Q Consensus 210 sa~~~-~~g~l~v~GG~~~~~-----~~l~d~~~ld~~~~~~W~W~~~~-----~~~P~~R~~hs~~~~~~~--i~V~GG 276 (769)
-++.. ...++|+.|-+-... ....|+|.||..++ .|.... ..-|..-+.|.+++.+.+ +|||||
T Consensus 317 RMVid~S~~KLYLlG~Y~~sS~r~~~s~RsDfW~FDi~~~---~W~~ls~dt~~dGGP~~vfDHqM~Vd~~k~~iyVfGG 393 (723)
T KOG2437|consen 317 RMVIDISRRKLYLLGRYLDSSVRNSKSLRSDFWRFDIDTN---TWMLLSEDTAADGGPKLVFDHQMCVDSEKHMIYVFGG 393 (723)
T ss_pred hhhhhhhHhHHhhhhhccccccccccccccceEEEecCCc---eeEEecccccccCCcceeecceeeEecCcceEEEecC
Confidence 99964 345899999764332 23689999999977 666554 123678899999999776 999999
Q ss_pred ccCCCCcccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccCcccccceEEEEeC--CEEEEEcCcCCCccccc
Q 004198 277 ALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIG--VRIYIYGGLKGDILLDD 354 (769)
Q Consensus 277 ~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~~--~~iyv~GG~~~~~~~~D 354 (769)
+.-... ......+++||+....|..+........+ ... --..|.+|++-... .++|+|||....+.++=
T Consensus 394 r~~~~~-e~~f~GLYaf~~~~~~w~~l~e~~~~~~~---vvE-----~~~sR~ghcmE~~~~n~~ly~fggq~s~~El~L 464 (723)
T KOG2437|consen 394 RILTCN-EPQFSGLYAFNCQCQTWKLLREDSCNAGP---VVE-----DIQSRIGHCMEFHSKNRCLYVFGGQRSKTELNL 464 (723)
T ss_pred eeccCC-CccccceEEEecCCccHHHHHHHHhhcCc---chh-----HHHHHHHHHHHhcCCCCeEEeccCcccceEEee
Confidence 864432 12357899999999999987654321110 011 12378889887774 58999999887655543
Q ss_pred eE
Q 004198 355 FL 356 (769)
Q Consensus 355 ~~ 356 (769)
+.
T Consensus 465 ~f 466 (723)
T KOG2437|consen 465 FF 466 (723)
T ss_pred hh
Confidence 33
|
|
| >PF13964 Kelch_6: Kelch motif | Back alignment and domain information |
|---|
Probab=98.83 E-value=8.3e-09 Score=79.17 Aligned_cols=50 Identities=38% Similarity=0.778 Sum_probs=43.5
Q ss_pred CccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCccc
Q 004198 29 PRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPR 100 (769)
Q Consensus 29 ~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P~~R 100 (769)
||.+|+++++ +++||||||...... .++++++||+.+++|++++++ |.||
T Consensus 1 pR~~~s~v~~------~~~iyv~GG~~~~~~-------------~~~~v~~yd~~t~~W~~~~~m---p~pR 50 (50)
T PF13964_consen 1 PRYGHSAVVV------GGKIYVFGGYDNSGK-------------YSNDVERYDPETNTWEQLPPM---PTPR 50 (50)
T ss_pred CCccCEEEEE------CCEEEEECCCCCCCC-------------ccccEEEEcCCCCcEEECCCC---CCCC
Confidence 7999999999 999999999987522 689999999999999999865 6666
|
|
| >PF13964 Kelch_6: Kelch motif | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.2e-08 Score=78.19 Aligned_cols=50 Identities=30% Similarity=0.548 Sum_probs=45.4
Q ss_pred ccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCc
Q 004198 99 PRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPR 153 (769)
Q Consensus 99 ~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R 153 (769)
||.+|++++++++|||+||.......++++++||+.+ .+|+++ +++|.+|
T Consensus 1 pR~~~s~v~~~~~iyv~GG~~~~~~~~~~v~~yd~~t--~~W~~~---~~mp~pR 50 (50)
T PF13964_consen 1 PRYGHSAVVVGGKIYVFGGYDNSGKYSNDVERYDPET--NTWEQL---PPMPTPR 50 (50)
T ss_pred CCccCEEEEECCEEEEECCCCCCCCccccEEEEcCCC--CcEEEC---CCCCCCC
Confidence 6999999999999999999876577899999999999 779999 5899887
|
|
| >PLN02772 guanylate kinase | Back alignment and domain information |
|---|
Probab=98.77 E-value=3.6e-08 Score=106.68 Aligned_cols=88 Identities=17% Similarity=0.340 Sum_probs=76.4
Q ss_pred CCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccccceE
Q 004198 26 APGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAA 105 (769)
Q Consensus 26 ~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~ 105 (769)
.+.|+..|+++.+ ++++|||||...... .++.+|+||..+++|...+..|.+|.||-+|++
T Consensus 21 ~~~~~~~~tav~i------gdk~yv~GG~~d~~~-------------~~~~v~i~D~~t~~W~~P~V~G~~P~~r~GhSa 81 (398)
T PLN02772 21 GVKPKNRETSVTI------GDKTYVIGGNHEGNT-------------LSIGVQILDKITNNWVSPIVLGTGPKPCKGYSA 81 (398)
T ss_pred cCCCCCcceeEEE------CCEEEEEcccCCCcc-------------ccceEEEEECCCCcEecccccCCCCCCCCcceE
Confidence 3569999999999 999999999776321 478999999999999999999999999999999
Q ss_pred EEEC-CEEEEECccCCCCCCcCcEEEEEccC
Q 004198 106 AAVG-TMVVFQGGIGPAGHSTDDLYVLDLTN 135 (769)
Q Consensus 106 ~~~~-~~Iyv~GG~~~~~~~~~dl~~~d~~t 135 (769)
+.++ ++|+|+++.++. .+++|.+...|
T Consensus 82 ~v~~~~rilv~~~~~~~---~~~~w~l~~~t 109 (398)
T PLN02772 82 VVLNKDRILVIKKGSAP---DDSIWFLEVDT 109 (398)
T ss_pred EEECCceEEEEeCCCCC---ccceEEEEcCC
Confidence 9996 599999876544 38899999887
|
|
| >PLN02772 guanylate kinase | Back alignment and domain information |
|---|
Probab=98.76 E-value=3.7e-08 Score=106.56 Aligned_cols=89 Identities=17% Similarity=0.340 Sum_probs=78.8
Q ss_pred CcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCC
Q 004198 97 PSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKR 176 (769)
Q Consensus 97 P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~ 176 (769)
+.|+..|+++.+++++||+||.+..+...+++|+||..+ ++|....+.|..|.+|.||+++++++.+|+|+++....
T Consensus 22 ~~~~~~~tav~igdk~yv~GG~~d~~~~~~~v~i~D~~t--~~W~~P~V~G~~P~~r~GhSa~v~~~~rilv~~~~~~~- 98 (398)
T PLN02772 22 VKPKNRETSVTIGDKTYVIGGNHEGNTLSIGVQILDKIT--NNWVSPIVLGTGPKPCKGYSAVVLNKDRILVIKKGSAP- 98 (398)
T ss_pred CCCCCcceeEEECCEEEEEcccCCCccccceEEEEECCC--CcEecccccCCCCCCCCcceEEEECCceEEEEeCCCCC-
Confidence 468999999999999999999877666789999999999 88999999999999999999999988899998875554
Q ss_pred ccCceeEEeCCCC
Q 004198 177 VLSDAWALDTAQK 189 (769)
Q Consensus 177 ~~~dv~~~d~~~~ 189 (769)
-.++|.+.+.+.
T Consensus 99 -~~~~w~l~~~t~ 110 (398)
T PLN02772 99 -DDSIWFLEVDTP 110 (398)
T ss_pred -ccceEEEEcCCH
Confidence 378999988774
|
|
| >PF13415 Kelch_3: Galactose oxidase, central domain | Back alignment and domain information |
|---|
Probab=98.73 E-value=2.4e-08 Score=76.27 Aligned_cols=49 Identities=41% Similarity=0.783 Sum_probs=41.1
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccccceEEEE
Q 004198 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV 108 (769)
Q Consensus 45 ~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~ 108 (769)
+++||||||....... ..+++|+||+.+++|+++ ++.|.+|.+|+++++
T Consensus 1 g~~~~vfGG~~~~~~~------------~~nd~~~~~~~~~~W~~~---~~~P~~R~~h~~~~i 49 (49)
T PF13415_consen 1 GNKLYVFGGYDDDGGT------------RLNDVWVFDLDTNTWTRI---GDLPPPRSGHTATVI 49 (49)
T ss_pred CCEEEEECCcCCCCCC------------EecCEEEEECCCCEEEEC---CCCCCCccceEEEEC
Confidence 5799999999852221 689999999999999988 557999999999874
|
|
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=5.8e-08 Score=96.36 Aligned_cols=67 Identities=19% Similarity=0.330 Sum_probs=52.4
Q ss_pred CEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCC--------hHHHHHHHHHhhhcCCCceEEecC
Q 004198 582 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQH--------SLETITLLLALKIEYPENVHLIRG 653 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~--------s~e~l~ll~~lk~~~p~~v~llrG 653 (769)
++.|++|+||++.++.++++.+.....+ .++++||++|+|++ +.+++.+|..+ ...+++++|
T Consensus 2 ri~viSD~Hg~~~~~~~~l~~~~~~~~d------~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~----~~~v~~V~G 71 (182)
T PRK09453 2 KLMFASDTHGSLPATEKALELFAQSGAD------WLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY----ADKIIAVRG 71 (182)
T ss_pred eEEEEEeccCCHHHHHHHHHHHHhcCCC------EEEEcccccccCcCCCCccccCHHHHHHHHHhc----CCceEEEcc
Confidence 4889999999999999998877433333 78999999999873 46677766554 247999999
Q ss_pred Ccchh
Q 004198 654 NHEAA 658 (769)
Q Consensus 654 NHE~~ 658 (769)
|||..
T Consensus 72 NhD~~ 76 (182)
T PRK09453 72 NCDSE 76 (182)
T ss_pred CCcch
Confidence 99974
|
|
| >PF13415 Kelch_3: Galactose oxidase, central domain | Back alignment and domain information |
|---|
Probab=98.65 E-value=6.1e-08 Score=73.98 Aligned_cols=48 Identities=33% Similarity=0.719 Sum_probs=42.6
Q ss_pred CCEEEEECccC-CCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEE
Q 004198 109 GTMVVFQGGIG-PAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLV 161 (769)
Q Consensus 109 ~~~Iyv~GG~~-~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~ 161 (769)
+++||||||.+ .....++|+|+||+.+ .+|+++ +++|.+|++|+++++
T Consensus 1 g~~~~vfGG~~~~~~~~~nd~~~~~~~~--~~W~~~---~~~P~~R~~h~~~~i 49 (49)
T PF13415_consen 1 GNKLYVFGGYDDDGGTRLNDVWVFDLDT--NTWTRI---GDLPPPRSGHTATVI 49 (49)
T ss_pred CCEEEEECCcCCCCCCEecCEEEEECCC--CEEEEC---CCCCCCccceEEEEC
Confidence 57899999987 5677899999999999 789999 789999999999764
|
|
| >PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.2e-07 Score=91.44 Aligned_cols=77 Identities=29% Similarity=0.361 Sum_probs=55.6
Q ss_pred CEEEEccCCCCHHHH---HHHH-HHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHH--HHhhhcCCCceEEecCCc
Q 004198 582 PVKVFGDLHGQFGDL---MRLF-DEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLL--LALKIEYPENVHLIRGNH 655 (769)
Q Consensus 582 ~i~viGDiHG~~~~l---~~~l-~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll--~~lk~~~p~~v~llrGNH 655 (769)
+|.++||+|+..... .+.+ +.......+ -+|++||++|++..+.+..... ...+...+..+++++|||
T Consensus 2 ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d------~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNH 75 (200)
T PF00149_consen 2 RILVISDLHGGYDDDSDAFRKLDEIAAENKPD------FIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNH 75 (200)
T ss_dssp EEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTS------EEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TT
T ss_pred eEEEEcCCCCCCcchhHHHHHHHHHhccCCCC------EEEeeccccccccccccchhhhccchhhhhcccccccccccc
Confidence 389999999999987 3333 322222222 6888999999999988877665 555556678999999999
Q ss_pred chhhhhhcc
Q 004198 656 EAADINALF 664 (769)
Q Consensus 656 E~~~~~~~~ 664 (769)
|........
T Consensus 76 D~~~~~~~~ 84 (200)
T PF00149_consen 76 DYYSGNSFY 84 (200)
T ss_dssp SSHHHHHHH
T ss_pred ccceecccc
Confidence 998765443
|
The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C .... |
| >PF07646 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.6e-07 Score=71.60 Aligned_cols=48 Identities=33% Similarity=0.743 Sum_probs=39.9
Q ss_pred CccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCC
Q 004198 29 PRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPA 93 (769)
Q Consensus 29 ~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~ 93 (769)
||.+|+++++ +++||+|||....... ...+++++||+.+++|+.++++
T Consensus 1 ~r~~hs~~~~------~~kiyv~GG~~~~~~~-----------~~~~~v~~~d~~t~~W~~~~~~ 48 (49)
T PF07646_consen 1 PRYGHSAVVL------DGKIYVFGGYGTDNGG-----------SSSNDVWVFDTETNQWTELSPM 48 (49)
T ss_pred CccceEEEEE------CCEEEEECCcccCCCC-----------cccceeEEEECCCCEEeecCCC
Confidence 7999999999 9999999999222211 2689999999999999998865
|
This sequence motif represents one beta-sheet blade, and several of these repeats can associate to form a beta-propeller. For instance, the motif appears 6 times in Drosophila egg-chamber regulatory protein, creating a 6-bladed beta-propeller. The motif is also found in mouse protein MIPP [] and in a number of poxviruses. In addition, kelch repeats have been recognised in alpha- and beta-scruin [, ], and in galactose oxidase from the fungus Dactylium dendroides [, ]. The structure of galactose oxidase reveals that the repeated sequence corresponds to a 4-stranded anti-parallel beta-sheet motif that forms the repeat unit in a super-barrel structural fold []. The known functions of kelch-containing proteins are diverse: scruin is an actin cross-linking protein; galactose oxidase catalyses the oxidation of the hydroxyl group at the C6 position in D-galactose; neuraminidase hydrolyses sialic acid residues from glycoproteins; and kelch may have a cytoskeletal function, as it is localised to the actin-rich ring canals that connect the 15 nurse cells to the developing oocyte in Drosophila []. Nevertheless, based on the location of the kelch pattern in the catalytic unit in galactose oxidase, functionally important residues have been predicted in glyoxal oxidase []. This entry represents a type of kelch sequence motif that comprises one beta-sheet blade.; GO: 0005515 protein binding |
| >cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.55 E-value=3e-07 Score=88.68 Aligned_cols=86 Identities=27% Similarity=0.373 Sum_probs=63.2
Q ss_pred CEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhh
Q 004198 582 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADIN 661 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~ 661 (769)
+|.+++|+||+...+.++++.+.. .+ .++++||++++++... ++ ....+++++||||....
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d------~ii~~GD~~~~~~~~~--------~~--~~~~~~~V~GNhD~~~~- 61 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VD------LIIHAGDVLYPGPLNE--------LE--LKAPVIAVRGNCDGEVD- 61 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CC------EEEECCccccccccch--------hh--cCCcEEEEeCCCCCcCC-
Confidence 378999999999999999998754 22 7899999999998765 11 22469999999997432
Q ss_pred hccCCHHHHHHHhCCCCchhhhHHHhHhhccccceEEEe---ceEEEEcCCCCCCC
Q 004198 662 ALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIE---KKIICMHGGIGRSI 714 (769)
Q Consensus 662 ~~~g~~~e~~~~~~~~~~~~~~~~~~~~f~~lP~~~~i~---~~i~~vHgGi~~~~ 714 (769)
+..+|....++ .+++++||...+..
T Consensus 62 ----------------------------~~~~p~~~~~~~~g~~i~v~Hg~~~~~~ 89 (155)
T cd00841 62 ----------------------------FPILPEEAVLEIGGKRIFLTHGHLYGVK 89 (155)
T ss_pred ----------------------------cccCCceEEEEECCEEEEEECCcccccc
Confidence 23455444432 37999999875543
|
YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph |
| >PF03089 RAG2: Recombination activating protein 2; InterPro: IPR004321 The variable portion of the genes encoding immunoglobulins and T cell receptors are assembled from component V, D, and J DNA segments by a site-specific recombination reaction termed V(D)J recombination | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.1e-05 Score=81.79 Aligned_cols=183 Identities=14% Similarity=0.229 Sum_probs=109.6
Q ss_pred EEEEECccCCCCCCcCcEEEEEccCCc-c-----eEEEeeecCCCCCCccccEEEEE---CCcEEEEEecCCCC------
Q 004198 111 MVVFQGGIGPAGHSTDDLYVLDLTNDK-F-----KWHRVVVQGQGPGPRYGHVMDLV---SQRYLVSVSGNDGK------ 175 (769)
Q Consensus 111 ~Iyv~GG~~~~~~~~~dl~~~d~~t~~-~-----~W~~~~~~g~~p~~R~~hs~~~~---~~~~l~v~GG~~~~------ 175 (769)
..+|.||..++...++.+|++...+.. + ...+-...|+.|.+||||++.++ ++...++|||+...
T Consensus 40 ~YlIHGGrTPNNElS~~LY~ls~~s~~cNkK~tl~C~EKeLvGdvP~aRYGHt~~vV~SrGKta~VlFGGRSY~P~~qRT 119 (337)
T PF03089_consen 40 QYLIHGGRTPNNELSSSLYILSVDSRGCNKKVTLCCQEKELVGDVPEARYGHTINVVHSRGKTACVLFGGRSYMPPGQRT 119 (337)
T ss_pred eEEecCCcCCCcccccceEEEEeecCCCCceeEEEEecceecCCCCcccccceEEEEEECCcEEEEEECCcccCCccccc
Confidence 667789999999999999999887643 2 23333446999999999999877 34478899997421
Q ss_pred --------CccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCC-CcccceEEEecCCCC--
Q 004198 176 --------RVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASG-APLADAYGLLMHRNG-- 244 (769)
Q Consensus 176 --------~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~-~~l~d~~~ld~~~~~-- 244 (769)
.....|+.+|++-+ ..+. ...++.--.-.+|.+.+ .+..+|+.||..-.. .....++++.++--.
T Consensus 120 TenWNsVvDC~P~VfLiDleFG--C~ta-h~lpEl~dG~SFHvsla-r~D~VYilGGHsl~sd~Rpp~l~rlkVdLllGS 195 (337)
T PF03089_consen 120 TENWNSVVDCPPQVFLIDLEFG--CCTA-HTLPELQDGQSFHVSLA-RNDCVYILGGHSLESDSRPPRLYRLKVDLLLGS 195 (337)
T ss_pred hhhcceeccCCCeEEEEecccc--cccc-ccchhhcCCeEEEEEEe-cCceEEEEccEEccCCCCCCcEEEEEEeecCCC
Confidence 13445777888765 3322 22333334556677776 466999999985443 345667777654210
Q ss_pred -ceEEEeCCCCCCCcccceEEEEe----CCEEEEEecccCCCCcccC-------CCcEEEEECCCCcEEe
Q 004198 245 -QWEWTLAPGVAPSPRYQHAAVFV----GARLHVTGGALRGGRAIEG-------EAAVAVLDTAAGVWLD 302 (769)
Q Consensus 245 -~W~W~~~~~~~P~~R~~hs~~~~----~~~i~V~GG~~~~~~~~~~-------~~~v~~yd~~t~~W~~ 302 (769)
.-+.+.+ +. ....+.+++ .+..+|+||+......... .+.+.+--.++-+|+.
T Consensus 196 P~vsC~vl----~~-glSisSAIvt~~~~~e~iIlGGY~sdsQKRm~C~~V~Ldd~~I~ie~~E~P~Wt~ 260 (337)
T PF03089_consen 196 PAVSCTVL----QG-GLSISSAIVTQTGPHEYIILGGYQSDSQKRMECNTVSLDDDGIHIEEREPPEWTG 260 (337)
T ss_pred ceeEEEEC----CC-CceEeeeeEeecCCCceEEEecccccceeeeeeeEEEEeCCceEeccCCCCCCCC
Confidence 0011111 11 122233332 4678899998654422222 3334444455666653
|
V(D)J recombination is targeted to specific sites on the chromosome by recombination signal sequences (RSSs) that flank antigen receptor gene segments. The RSS consists of a conserved heptamer (consensus, 5'-CACAGTG-3') and nonamer (consensus, 5'-ACAAAAACC-3') separated by a spacer of either 12 or 23 bp. Efficient recombination occurs between a 12-RSS and a 23-RSS, a restriction known as the 12/23 rule. V(D)J recombination can be divided into two phases, DNA cleavage and DNA joining. DNA cleavage requires two lymphocyte-specific factors, the products of the recombination activating genes, RAG1 and RAG2, which together recognise the RSSs and create double strand breaks at the RSS-coding segment junctions []. RAG-mediated DNA cleavage occurs in a synaptic complex termed the paired complex, which is constituted from two distinct RSS-RAG complexes, a 12-SC and a 23-SC (where SC stands for signal complex). The DNA cleavage reaction involves two distinct enzymatic steps, initial nicking that creates a 3'-OH between a coding segment and its RSS, followed by hairpin formation in which the newly created 3'-OH attacks a phosphodiester bond on the opposite DNA strand. This generates a blunt, 5' phosphorylated signal end containing all of the RSS elements, and a covalently sealed hairpin coding end. The second phase of V(D)J recombination, in which broken DNA fragments are processed and joined, is less well characterised. Signal ends are typically joined precisely to form a signal joint, whereas joining of the coding ends requires the hairpin structure to be opened and typically involves nucleotide addition and deletion before formation of the coding joint. The factors involved in these processes include ubiquitously expressed proteins involved in the repair of DNA double strand breaks by nonhomologous end joining, terminal deoxynucleotidyl transferase, and Artemis protein. In addition to their critical roles in RSS recognition and DNA cleavage, the RAG proteins may perform two distinct types of functions in the postcleavage phase of V(D)J. A structural function has been inferred from the finding that, after DNA cleavage in vitro, the DNA ends remain associated with the RAG proteins in a "four end" complex known as the cleaved signal complex. After release of the coding ends in vitro, and after coding joint formation in vivo, the RAG proteins remain in a stable signal end complex (SEC) containing the two signal ends. These postcleavage complexes may serve as essential scaffolds for the second phase of the reaction, with the RAG proteins acting to organise the DNA processing and joining events. The second type of RAG protein-mediated postcleavage activity is the catalysis of phosphodiester bond hydrolysis and strand transfer reactions. The RAG proteins are capable of opening hairpin coding ends in vitro. The RAG proteins also show 3' flap endonuclease activity that may contribute to coding end processing/joining and can utilise the 3' OH group on the signal ends to attack hairpin coding ends (forming hybrid or open/shut joints) or virtually any DNA duplex (forming a transposition product).; GO: 0003677 DNA binding, 0006310 DNA recombination, 0005634 nucleus |
| >PF07646 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.8e-07 Score=71.33 Aligned_cols=48 Identities=29% Similarity=0.477 Sum_probs=39.8
Q ss_pred cccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccCC
Q 004198 258 PRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGL 306 (769)
Q Consensus 258 ~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~ 306 (769)
+|++|++++++++|||+||+. ........+++++||+++++|+.++.+
T Consensus 1 ~r~~hs~~~~~~kiyv~GG~~-~~~~~~~~~~v~~~d~~t~~W~~~~~~ 48 (49)
T PF07646_consen 1 PRYGHSAVVLDGKIYVFGGYG-TDNGGSSSNDVWVFDTETNQWTELSPM 48 (49)
T ss_pred CccceEEEEECCEEEEECCcc-cCCCCcccceeEEEECCCCEEeecCCC
Confidence 689999999999999999991 111233478999999999999998876
|
This sequence motif represents one beta-sheet blade, and several of these repeats can associate to form a beta-propeller. For instance, the motif appears 6 times in Drosophila egg-chamber regulatory protein, creating a 6-bladed beta-propeller. The motif is also found in mouse protein MIPP [] and in a number of poxviruses. In addition, kelch repeats have been recognised in alpha- and beta-scruin [, ], and in galactose oxidase from the fungus Dactylium dendroides [, ]. The structure of galactose oxidase reveals that the repeated sequence corresponds to a 4-stranded anti-parallel beta-sheet motif that forms the repeat unit in a super-barrel structural fold []. The known functions of kelch-containing proteins are diverse: scruin is an actin cross-linking protein; galactose oxidase catalyses the oxidation of the hydroxyl group at the C6 position in D-galactose; neuraminidase hydrolyses sialic acid residues from glycoproteins; and kelch may have a cytoskeletal function, as it is localised to the actin-rich ring canals that connect the 15 nurse cells to the developing oocyte in Drosophila []. Nevertheless, based on the location of the kelch pattern in the catalytic unit in galactose oxidase, functionally important residues have been predicted in glyoxal oxidase []. This entry represents a type of kelch sequence motif that comprises one beta-sheet blade.; GO: 0005515 protein binding |
| >PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B | Back alignment and domain information |
|---|
Probab=98.45 E-value=2e-07 Score=71.15 Aligned_cols=47 Identities=30% Similarity=0.678 Sum_probs=30.9
Q ss_pred ccccceEEEEC-CEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCC
Q 004198 99 PRAAHAAAAVG-TMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGP 150 (769)
Q Consensus 99 ~R~~hs~~~~~-~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p 150 (769)
||++|+++.++ +.||||||.+..+..++|+|+||+.+ .+|+++ +++|
T Consensus 1 pR~~h~~~~~~~~~i~v~GG~~~~~~~~~d~~~~d~~~--~~W~~~---~~~P 48 (49)
T PF13418_consen 1 PRYGHSAVSIGDNSIYVFGGRDSSGSPLNDLWIFDIET--NTWTRL---PSMP 48 (49)
T ss_dssp --BS-EEEEE-TTEEEEE--EEE-TEE---EEEEETTT--TEEEE-----SS-
T ss_pred CcceEEEEEEeCCeEEEECCCCCCCcccCCEEEEECCC--CEEEEC---CCCC
Confidence 69999999995 89999999987777899999999999 789999 4555
|
|
| >PF13854 Kelch_5: Kelch motif | Back alignment and domain information |
|---|
Probab=98.41 E-value=4.7e-07 Score=66.57 Aligned_cols=40 Identities=43% Similarity=0.696 Sum_probs=36.3
Q ss_pred CCcccccceEEEECCEEEEECccC-CCCCCcCcEEEEEccC
Q 004198 96 PPSPRAAHAAAAVGTMVVFQGGIG-PAGHSTDDLYVLDLTN 135 (769)
Q Consensus 96 ~P~~R~~hs~~~~~~~Iyv~GG~~-~~~~~~~dl~~~d~~t 135 (769)
+|.+|++|+++.++++|||+||.. .....++|+|+||+.+
T Consensus 1 ~P~~R~~hs~~~~~~~iyi~GG~~~~~~~~~~d~~~l~l~s 41 (42)
T PF13854_consen 1 IPSPRYGHSAVVVGNNIYIFGGYSGNNNSYSNDLYVLDLPS 41 (42)
T ss_pred CCCCccceEEEEECCEEEEEcCccCCCCCEECcEEEEECCC
Confidence 478999999999999999999987 4777899999999976
|
|
| >cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.40 E-value=8.3e-07 Score=90.56 Aligned_cols=113 Identities=20% Similarity=0.197 Sum_probs=72.0
Q ss_pred CEEEEccCCCCHHHHH-HHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhh
Q 004198 582 PVKVFGDLHGQFGDLM-RLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADI 660 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~-~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~ 660 (769)
.|.++|||||++.... +.++..+ + + .+|++||+++. +++++..|..+ +..+++++||||....
T Consensus 2 rIa~isDiHg~~~~~~~~~l~~~~--p-D------~Vl~~GDi~~~---~~~~~~~l~~l----~~p~~~V~GNHD~~~~ 65 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALHLLQ--P-D------LVLFVGDFGNE---SVQLVRAISSL----PLPKAVILGNHDAWYD 65 (238)
T ss_pred EEEEEecCCCCchHHHHHHHhccC--C-C------EEEECCCCCcC---hHHHHHHHHhC----CCCeEEEcCCCccccc
Confidence 3899999999987642 3444332 2 2 68999999864 56777776654 2468999999997553
Q ss_pred hhc---cCCH------------------------------------------HHHHHHhCCCCchhhhHHHhHhhccccc
Q 004198 661 NAL---FGFR------------------------------------------LECIERMGENDGIWAWTRFNQLFNCLPL 695 (769)
Q Consensus 661 ~~~---~g~~------------------------------------------~e~~~~~~~~~~~~~~~~~~~~f~~lP~ 695 (769)
... +... .++...|+ ....++.+..+++.++.
T Consensus 66 ~~~~~k~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fg---i~s~~eA~~~ive~~~~ 142 (238)
T cd07397 66 ATFRKKGDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYG---VISLEESAQRIIAAAKK 142 (238)
T ss_pred ccccchHHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhC---CCCHHHHHHHHHHHhhh
Confidence 210 0001 14444454 22344566677777764
Q ss_pred eEEEeceEEEEcCCCCCC
Q 004198 696 AALIEKKIICMHGGIGRS 713 (769)
Q Consensus 696 ~~~i~~~i~~vHgGi~~~ 713 (769)
+...+..||+.|+++...
T Consensus 143 ~~~~~~~VliaH~~~~G~ 160 (238)
T cd07397 143 APPDLPLILLAHNGPSGL 160 (238)
T ss_pred cCCCCCeEEEeCcCCcCC
Confidence 444445799999999654
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy |
| >PF13854 Kelch_5: Kelch motif | Back alignment and domain information |
|---|
Probab=98.38 E-value=5.4e-07 Score=66.25 Aligned_cols=39 Identities=31% Similarity=0.611 Sum_probs=35.3
Q ss_pred cccccceEEEEeCCEEEEEcCcCC--CccccceEEecCCCC
Q 004198 325 LMRRCRHASASIGVRIYIYGGLKG--DILLDDFLVAENSPF 363 (769)
Q Consensus 325 ~~~R~~hs~~~~~~~iyv~GG~~~--~~~~~D~~~ld~~~~ 363 (769)
|.+|.+|++++++++||||||..+ ...++|+|+||+.++
T Consensus 2 P~~R~~hs~~~~~~~iyi~GG~~~~~~~~~~d~~~l~l~sf 42 (42)
T PF13854_consen 2 PSPRYGHSAVVVGNNIYIFGGYSGNNNSYSNDLYVLDLPSF 42 (42)
T ss_pred CCCccceEEEEECCEEEEEcCccCCCCCEECcEEEEECCCC
Confidence 569999999999999999999994 688999999998763
|
|
| >PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] | Back alignment and domain information |
|---|
Probab=98.38 E-value=4e-07 Score=68.73 Aligned_cols=44 Identities=30% Similarity=0.527 Sum_probs=40.2
Q ss_pred ccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEee
Q 004198 99 PRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVV 144 (769)
Q Consensus 99 ~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~ 144 (769)
||+.|++++++++||++||.......++++++||+.+ .+|++++
T Consensus 1 pR~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~~--~~W~~~~ 44 (47)
T PF01344_consen 1 PRSGHAAVVVGNKIYVIGGYDGNNQPTNSVEVYDPET--NTWEELP 44 (47)
T ss_dssp -BBSEEEEEETTEEEEEEEBESTSSBEEEEEEEETTT--TEEEEEE
T ss_pred CCccCEEEEECCEEEEEeeecccCceeeeEEEEeCCC--CEEEEcC
Confidence 6999999999999999999987788899999999999 7799995
|
This sequence motif represents one beta-sheet blade, and several of these repeats can associate to form a beta-propeller. For instance, the motif appears 6 times in Drosophila egg-chamber regulatory protein, creating a 6-bladed beta-propeller. The motif is also found in mouse protein MIPP [] and in a number of poxviruses. In addition, kelch repeats have been recognised in alpha- and beta-scruin [, ], and in galactose oxidase from the fungus Dactylium dendroides [, ]. The structure of galactose oxidase reveals that the repeated sequence corresponds to a 4-stranded anti-parallel beta-sheet motif that forms the repeat unit in a super-barrel structural fold []. The known functions of kelch-containing proteins are diverse: scruin is an actin cross-linking protein; galactose oxidase catalyses the oxidation of the hydroxyl group at the C6 position in D-galactose; neuraminidase hydrolyses sialic acid residues from glycoproteins; and kelch may have a cytoskeletal function, as it is localised to the actin-rich ring canals that connect the 15 nurse cells to the developing oocyte in Drosophila []. Nevertheless, based on the location of the kelch pattern in the catalytic unit in galactose oxidase, functionally important residues have been predicted in glyoxal oxidase []. This entry represents a type of kelch sequence motif that comprises one beta-sheet blade.; GO: 0005515 protein binding; PDB: 2XN4_A 2WOZ_A 3II7_A 4ASC_A 1U6D_X 1ZGK_A 2FLU_X 2VPJ_A 2DYH_A 1X2R_A .... |
| >PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B | Back alignment and domain information |
|---|
Probab=98.37 E-value=3.6e-07 Score=69.72 Aligned_cols=46 Identities=30% Similarity=0.647 Sum_probs=30.6
Q ss_pred CccccEEEEECCcEEEEEecCCCC-CccCceeEEeCCCCCceEEEcCCC
Q 004198 152 PRYGHVMDLVSQRYLVSVSGNDGK-RVLSDAWALDTAQKPYVWQRLNPE 199 (769)
Q Consensus 152 ~R~~hs~~~~~~~~l~v~GG~~~~-~~~~dv~~~d~~~~~~~W~~v~~~ 199 (769)
||++|+++.+.++.+|||||.+.. ..++|+|+||++++ +|+++.++
T Consensus 1 pR~~h~~~~~~~~~i~v~GG~~~~~~~~~d~~~~d~~~~--~W~~~~~~ 47 (49)
T PF13418_consen 1 PRYGHSAVSIGDNSIYVFGGRDSSGSPLNDLWIFDIETN--TWTRLPSM 47 (49)
T ss_dssp --BS-EEEEE-TTEEEEE--EEE-TEE---EEEEETTTT--EEEE--SS
T ss_pred CcceEEEEEEeCCeEEEECCCCCCCcccCCEEEEECCCC--EEEECCCC
Confidence 699999999976799999999876 69999999999999 99999543
|
|
| >TIGR00040 yfcE phosphoesterase, MJ0936 family | Back alignment and domain information |
|---|
Probab=98.37 E-value=1.5e-06 Score=84.21 Aligned_cols=61 Identities=20% Similarity=0.281 Sum_probs=46.3
Q ss_pred CEEEEccCCCCHHHHHHHHHHhCCC-CCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcch
Q 004198 582 PVKVFGDLHGQFGDLMRLFDEYGFP-STAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEA 657 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~~~l~~~~~~-~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~ 657 (769)
.+.|++|+||++.++..+++..... ..+ .++++||++ +.+++.++..+. ..++.++||||.
T Consensus 2 ~i~viSD~H~~~~~~~~~~~~~~~~~~~d------~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~ 63 (158)
T TIGR00040 2 KILVISDTHGPLRATELPVELFNLESNVD------LVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDG 63 (158)
T ss_pred EEEEEecccCCcchhHhHHHHHhhccCCC------EEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCc
Confidence 3889999999998777666655433 222 688899999 467777776543 359999999997
|
Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required. |
| >PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] | Back alignment and domain information |
|---|
Probab=98.37 E-value=5.7e-07 Score=67.86 Aligned_cols=46 Identities=33% Similarity=0.522 Sum_probs=39.8
Q ss_pred cccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccCC
Q 004198 258 PRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGL 306 (769)
Q Consensus 258 ~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~ 306 (769)
||.+|++++++++|||+||..... ...+++++||+.+++|+.++++
T Consensus 1 pR~~~~~~~~~~~iyv~GG~~~~~---~~~~~v~~yd~~~~~W~~~~~m 46 (47)
T PF01344_consen 1 PRSGHAAVVVGNKIYVIGGYDGNN---QPTNSVEVYDPETNTWEELPPM 46 (47)
T ss_dssp -BBSEEEEEETTEEEEEEEBESTS---SBEEEEEEEETTTTEEEEEEEE
T ss_pred CCccCEEEEECCEEEEEeeecccC---ceeeeEEEEeCCCCEEEEcCCC
Confidence 689999999999999999988722 2478899999999999998876
|
This sequence motif represents one beta-sheet blade, and several of these repeats can associate to form a beta-propeller. For instance, the motif appears 6 times in Drosophila egg-chamber regulatory protein, creating a 6-bladed beta-propeller. The motif is also found in mouse protein MIPP [] and in a number of poxviruses. In addition, kelch repeats have been recognised in alpha- and beta-scruin [, ], and in galactose oxidase from the fungus Dactylium dendroides [, ]. The structure of galactose oxidase reveals that the repeated sequence corresponds to a 4-stranded anti-parallel beta-sheet motif that forms the repeat unit in a super-barrel structural fold []. The known functions of kelch-containing proteins are diverse: scruin is an actin cross-linking protein; galactose oxidase catalyses the oxidation of the hydroxyl group at the C6 position in D-galactose; neuraminidase hydrolyses sialic acid residues from glycoproteins; and kelch may have a cytoskeletal function, as it is localised to the actin-rich ring canals that connect the 15 nurse cells to the developing oocyte in Drosophila []. Nevertheless, based on the location of the kelch pattern in the catalytic unit in galactose oxidase, functionally important residues have been predicted in glyoxal oxidase []. This entry represents a type of kelch sequence motif that comprises one beta-sheet blade.; GO: 0005515 protein binding; PDB: 2XN4_A 2WOZ_A 3II7_A 4ASC_A 1U6D_X 1ZGK_A 2FLU_X 2VPJ_A 2DYH_A 1X2R_A .... |
| >PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] | Back alignment and domain information |
|---|
Probab=98.25 E-value=3.2e-06 Score=81.18 Aligned_cols=60 Identities=30% Similarity=0.495 Sum_probs=44.1
Q ss_pred CEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhh
Q 004198 582 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAAD 659 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~ 659 (769)
+|.++||+|++...+.++++.+. ..+ .++++||++|+ .+++.++..+ .+++++||||...
T Consensus 2 ki~~~sD~H~~~~~~~~~~~~~~--~~d------~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~ 61 (156)
T PF12850_consen 2 KIAVISDLHGNLDALEAVLEYIN--EPD------FVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWA 61 (156)
T ss_dssp EEEEEE--TTTHHHHHHHHHHHT--TES------EEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTH
T ss_pred EEEEEeCCCCChhHHHHHHHHhc--CCC------EEEECCCchhH----HHHHHHHhcC------CEEEEeCCccccc
Confidence 38899999999999999999982 122 67889999993 7777777655 6999999999654
|
; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A .... |
| >cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.12 E-value=6.7e-06 Score=83.78 Aligned_cols=70 Identities=13% Similarity=0.166 Sum_probs=55.3
Q ss_pred CEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchh
Q 004198 582 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAA 658 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~ 658 (769)
.|.+++||||++..|.++++.......+ .+|++||++++|+..-++..++..+... +..+++++||||..
T Consensus 6 kIl~iSDiHgn~~~le~l~~~~~~~~~D------~vv~~GDl~~~g~~~~~~~~~l~~l~~l-~~pv~~V~GNhD~~ 75 (224)
T cd07388 6 YVLATSNPKGDLEALEKLVGLAPETGAD------AIVLIGNLLPKAAKSEDYAAFFRILGEA-HLPTFYVPGPQDAP 75 (224)
T ss_pred EEEEEEecCCCHHHHHHHHHHHhhcCCC------EEEECCCCCCCCCCHHHHHHHHHHHHhc-CCceEEEcCCCChH
Confidence 4899999999999999999876432223 6889999999998777777777666432 34799999999975
|
This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets, |
| >PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes | Back alignment and domain information |
|---|
Probab=98.08 E-value=0.00013 Score=74.92 Aligned_cols=154 Identities=14% Similarity=0.210 Sum_probs=100.0
Q ss_pred EEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCC--CCceEEEcCCCCCCCCc
Q 004198 128 LYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQ--KPYVWQRLNPEGDRPSA 205 (769)
Q Consensus 128 l~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~--~~~~W~~v~~~~~~P~~ 205 (769)
-..||+.+ ++++.+.+ +.--+..+.++..++.+++.||.... ...+-.|++.. ..-.|...... +-.+
T Consensus 48 s~~yD~~t--n~~rpl~v----~td~FCSgg~~L~dG~ll~tGG~~~G--~~~ir~~~p~~~~~~~~w~e~~~~--m~~~ 117 (243)
T PF07250_consen 48 SVEYDPNT--NTFRPLTV----QTDTFCSGGAFLPDGRLLQTGGDNDG--NKAIRIFTPCTSDGTCDWTESPND--MQSG 117 (243)
T ss_pred EEEEecCC--CcEEeccC----CCCCcccCcCCCCCCCEEEeCCCCcc--ccceEEEecCCCCCCCCceECccc--ccCC
Confidence 45789988 66888743 33333334445667789999998552 24566677654 11168776542 4678
Q ss_pred ccccEEEEecCCEEEEEcccCCCCCcccceEEEecC---CCCceEEEeCC---CCCCCcccceEEEEeCCEEEEEecccC
Q 004198 206 RMYATASARSDGMFLLCGGRDASGAPLADAYGLLMH---RNGQWEWTLAP---GVAPSPRYQHAAVFVGARLHVTGGALR 279 (769)
Q Consensus 206 r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~---~~~~W~W~~~~---~~~P~~R~~hs~~~~~~~i~V~GG~~~ 279 (769)
|.|.++....||.++|+||.... .+.|... ....+.|.... ...+..-|-+....-+++||+++..
T Consensus 118 RWYpT~~~L~DG~vlIvGG~~~~------t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~-- 189 (243)
T PF07250_consen 118 RWYPTATTLPDGRVLIVGGSNNP------TYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANR-- 189 (243)
T ss_pred CccccceECCCCCEEEEeCcCCC------cccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcC--
Confidence 99999999999999999998732 2233222 11222332221 1224455666777779999999873
Q ss_pred CCCcccCCCcEEEEECCCCcE-EeccCCcc
Q 004198 280 GGRAIEGEAAVAVLDTAAGVW-LDRNGLVT 308 (769)
Q Consensus 280 ~~~~~~~~~~v~~yd~~t~~W-~~~~~~~~ 308 (769)
.-.+||..++++ +.++.++.
T Consensus 190 ---------~s~i~d~~~n~v~~~lP~lPg 210 (243)
T PF07250_consen 190 ---------GSIIYDYKTNTVVRTLPDLPG 210 (243)
T ss_pred ---------CcEEEeCCCCeEEeeCCCCCC
Confidence 357899999977 77777765
|
Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium []. |
| >smart00612 Kelch Kelch domain | Back alignment and domain information |
|---|
Probab=98.00 E-value=7.9e-06 Score=61.18 Aligned_cols=47 Identities=32% Similarity=0.613 Sum_probs=38.7
Q ss_pred EEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccccceEEEECC
Q 004198 47 RLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGT 110 (769)
Q Consensus 47 ~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~ 110 (769)
+||++||..... .++++++||+.+++|+.++++ |.+|..|+++++++
T Consensus 1 ~iyv~GG~~~~~--------------~~~~v~~yd~~~~~W~~~~~~---~~~r~~~~~~~~~g 47 (47)
T smart00612 1 KIYVVGGFDGGQ--------------RLKSVEVYDPETNKWTPLPSM---PTPRSGHGVAVING 47 (47)
T ss_pred CEEEEeCCCCCc--------------eeeeEEEECCCCCeEccCCCC---CCccccceEEEeCC
Confidence 489999986421 578999999999999988754 78999999988764
|
|
| >cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.95 E-value=1.5e-05 Score=74.96 Aligned_cols=60 Identities=23% Similarity=0.396 Sum_probs=39.5
Q ss_pred EEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChH--HHHHHHHHhhhcCCCceEEecCCcchh
Q 004198 583 VKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSL--ETITLLLALKIEYPENVHLIRGNHEAA 658 (769)
Q Consensus 583 i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~--e~l~ll~~lk~~~p~~v~llrGNHE~~ 658 (769)
|.+++|+||++. .+ .....+ -++++||+++++...- +.+.++..++ .| .++++.||||..
T Consensus 2 i~~isD~H~~~~----~~---~~~~~D------~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~~-~~~~v~GNHD~~ 63 (135)
T cd07379 2 FVCISDTHSRHR----TI---SIPDGD------VLIHAGDLTERGTLEELQKFLDWLKSLP--HP-HKIVIAGNHDLT 63 (135)
T ss_pred EEEEeCCCCCCC----cC---cCCCCC------EEEECCCCCCCCCHHHHHHHHHHHHhCC--CC-eEEEEECCCCCc
Confidence 789999999987 11 112222 5788999999986432 3445554442 22 367899999953
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme |
| >cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.90 E-value=3.9e-05 Score=70.38 Aligned_cols=67 Identities=28% Similarity=0.384 Sum_probs=48.1
Q ss_pred EEEccCCCCHHHHHHHH--HHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcc
Q 004198 584 KVFGDLHGQFGDLMRLF--DEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHE 656 (769)
Q Consensus 584 ~viGDiHG~~~~l~~~l--~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE 656 (769)
+++||+|+......... ........+ .+|++||+++.+....+........+......++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~------~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPD------FVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCC------EEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce
Confidence 47899999998887764 222111112 68889999999988777665533334455678999999999
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me |
| >cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.86 E-value=6.4e-05 Score=74.21 Aligned_cols=57 Identities=28% Similarity=0.468 Sum_probs=41.2
Q ss_pred EEEEccCC-CCHH-----HHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcc
Q 004198 583 VKVFGDLH-GQFG-----DLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHE 656 (769)
Q Consensus 583 i~viGDiH-G~~~-----~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE 656 (769)
|.||+|+| |.-. .+.++++. ...+ .++++||+++ .+++.+|..++ ..++.++||||
T Consensus 2 i~viSDtHl~~~~~~~~~~~~~~~~~---~~~d------~iih~GDi~~-----~~~~~~l~~~~----~~~~~V~GN~D 63 (178)
T cd07394 2 VLVIGDLHIPHRASDLPAKFKKLLVP---GKIQ------HVLCTGNLCS-----KETYDYLKTIA----PDVHIVRGDFD 63 (178)
T ss_pred EEEEEecCCCCCchhhHHHHHHHhcc---CCCC------EEEECCCCCC-----HHHHHHHHhhC----CceEEEECCCC
Confidence 78999999 6543 35555544 1122 6888999987 77888776653 26999999999
Q ss_pred h
Q 004198 657 A 657 (769)
Q Consensus 657 ~ 657 (769)
.
T Consensus 64 ~ 64 (178)
T cd07394 64 E 64 (178)
T ss_pred c
Confidence 6
|
Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl |
| >PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.0012 Score=67.87 Aligned_cols=163 Identities=13% Similarity=0.153 Sum_probs=98.9
Q ss_pred CCcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccC--CcceEEEeeecCCCCC
Q 004198 74 TNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTN--DKFKWHRVVVQGQGPG 151 (769)
Q Consensus 74 ~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t--~~~~W~~~~~~g~~p~ 151 (769)
...-..||+.+++++.+...-+. -.++|+.. -++.+++.||...+ .+.+-.|++.+ ....|.+.. ..+..
T Consensus 45 ~a~s~~yD~~tn~~rpl~v~td~--FCSgg~~L-~dG~ll~tGG~~~G---~~~ir~~~p~~~~~~~~w~e~~--~~m~~ 116 (243)
T PF07250_consen 45 PAHSVEYDPNTNTFRPLTVQTDT--FCSGGAFL-PDGRLLQTGGDNDG---NKAIRIFTPCTSDGTCDWTESP--NDMQS 116 (243)
T ss_pred eEEEEEEecCCCcEEeccCCCCC--cccCcCCC-CCCCEEEeCCCCcc---ccceEEEecCCCCCCCCceECc--ccccC
Confidence 34456699999999988754211 23333322 35688899997542 34566777653 224588875 35899
Q ss_pred CccccEEEEECCcEEEEEecCCCCCccCceeEEeCC---CCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCC
Q 004198 152 PRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTA---QKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDAS 228 (769)
Q Consensus 152 ~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~---~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~ 228 (769)
+|...++..+.++.++|+||.... ..+.+... ...+.|..+......-..-.|..+.+..+|+||+++..
T Consensus 117 ~RWYpT~~~L~DG~vlIvGG~~~~----t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~--- 189 (243)
T PF07250_consen 117 GRWYPTATTLPDGRVLIVGGSNNP----TYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANR--- 189 (243)
T ss_pred CCccccceECCCCCEEEEeCcCCC----cccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcC---
Confidence 999999999999999999998732 12222221 12234433332211122334556667789999999864
Q ss_pred CCcccceEEEecCCCCceEE-EeCCCCCCCcc
Q 004198 229 GAPLADAYGLLMHRNGQWEW-TLAPGVAPSPR 259 (769)
Q Consensus 229 ~~~l~d~~~ld~~~~~~W~W-~~~~~~~P~~R 259 (769)
+...||...+ ++ ...+..+-.+|
T Consensus 190 -----~s~i~d~~~n---~v~~~lP~lPg~~R 213 (243)
T PF07250_consen 190 -----GSIIYDYKTN---TVVRTLPDLPGGPR 213 (243)
T ss_pred -----CcEEEeCCCC---eEEeeCCCCCCCce
Confidence 3445666655 44 44554443344
|
Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium []. |
| >PF03089 RAG2: Recombination activating protein 2; InterPro: IPR004321 The variable portion of the genes encoding immunoglobulins and T cell receptors are assembled from component V, D, and J DNA segments by a site-specific recombination reaction termed V(D)J recombination | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.0096 Score=60.95 Aligned_cols=183 Identities=16% Similarity=0.203 Sum_probs=102.1
Q ss_pred CCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCc--------EEEecCCCCCC
Q 004198 26 APGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRK--------WTRIRPAGEPP 97 (769)
Q Consensus 26 ~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~--------W~~l~~~g~~P 97 (769)
+|+.|+-..+.............++-||.+.... .++.+|++.+.+.. .+.-.-.|+.|
T Consensus 19 LPPLR~PAv~~~~~~~~~~~~~YlIHGGrTPNNE-------------lS~~LY~ls~~s~~cNkK~tl~C~EKeLvGdvP 85 (337)
T PF03089_consen 19 LPPLRCPAVCHLSDPSDGEPEQYLIHGGRTPNNE-------------LSSSLYILSVDSRGCNKKVTLCCQEKELVGDVP 85 (337)
T ss_pred CCCCCCccEeeecCCCCCCeeeEEecCCcCCCcc-------------cccceEEEEeecCCCCceeEEEEecceecCCCC
Confidence 5777766555553333333345566688887664 67889998877543 22334568999
Q ss_pred cccccceEEEEC----CEEEEECccC--CCCC-----------CcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEE
Q 004198 98 SPRAAHAAAAVG----TMVVFQGGIG--PAGH-----------STDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDL 160 (769)
Q Consensus 98 ~~R~~hs~~~~~----~~Iyv~GG~~--~~~~-----------~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~ 160 (769)
.+|++|++-++- ..+++|||.+ +.+. ..-.+|.+|++-. ...... -..+.-.-.-|.+..
T Consensus 86 ~aRYGHt~~vV~SrGKta~VlFGGRSY~P~~qRTTenWNsVvDC~P~VfLiDleFG--C~tah~-lpEl~dG~SFHvsla 162 (337)
T PF03089_consen 86 EARYGHTINVVHSRGKTACVLFGGRSYMPPGQRTTENWNSVVDCPPQVFLIDLEFG--CCTAHT-LPELQDGQSFHVSLA 162 (337)
T ss_pred cccccceEEEEEECCcEEEEEECCcccCCccccchhhcceeccCCCeEEEEecccc--cccccc-chhhcCCeEEEEEEe
Confidence 999999998872 3899999975 2221 2245777787752 222221 023444445555534
Q ss_pred ECCcEEEEEecCCCC--CccCceeEEeCCC--CCceEEEcCCCCCCCCcccccEEEE--ecCCEEEEEcccCCCC
Q 004198 161 VSQRYLVSVSGNDGK--RVLSDAWALDTAQ--KPYVWQRLNPEGDRPSARMYATASA--RSDGMFLLCGGRDASG 229 (769)
Q Consensus 161 ~~~~~l~v~GG~~~~--~~~~dv~~~d~~~--~~~~W~~v~~~~~~P~~r~~hsa~~--~~~g~l~v~GG~~~~~ 229 (769)
.+..+|++||..-. ..-..++++.++- .. -+-..... +......+|.+ .....++|.||+..+.
T Consensus 163 -r~D~VYilGGHsl~sd~Rpp~l~rlkVdLllGS-P~vsC~vl---~~glSisSAIvt~~~~~e~iIlGGY~sds 232 (337)
T PF03089_consen 163 -RNDCVYILGGHSLESDSRPPRLYRLKVDLLLGS-PAVSCTVL---QGGLSISSAIVTQTGPHEYIILGGYQSDS 232 (337)
T ss_pred -cCceEEEEccEEccCCCCCCcEEEEEEeecCCC-ceeEEEEC---CCCceEeeeeEeecCCCceEEEecccccc
Confidence 44499999997432 2334555544321 10 01111111 11222233332 2345788899996654
|
V(D)J recombination is targeted to specific sites on the chromosome by recombination signal sequences (RSSs) that flank antigen receptor gene segments. The RSS consists of a conserved heptamer (consensus, 5'-CACAGTG-3') and nonamer (consensus, 5'-ACAAAAACC-3') separated by a spacer of either 12 or 23 bp. Efficient recombination occurs between a 12-RSS and a 23-RSS, a restriction known as the 12/23 rule. V(D)J recombination can be divided into two phases, DNA cleavage and DNA joining. DNA cleavage requires two lymphocyte-specific factors, the products of the recombination activating genes, RAG1 and RAG2, which together recognise the RSSs and create double strand breaks at the RSS-coding segment junctions []. RAG-mediated DNA cleavage occurs in a synaptic complex termed the paired complex, which is constituted from two distinct RSS-RAG complexes, a 12-SC and a 23-SC (where SC stands for signal complex). The DNA cleavage reaction involves two distinct enzymatic steps, initial nicking that creates a 3'-OH between a coding segment and its RSS, followed by hairpin formation in which the newly created 3'-OH attacks a phosphodiester bond on the opposite DNA strand. This generates a blunt, 5' phosphorylated signal end containing all of the RSS elements, and a covalently sealed hairpin coding end. The second phase of V(D)J recombination, in which broken DNA fragments are processed and joined, is less well characterised. Signal ends are typically joined precisely to form a signal joint, whereas joining of the coding ends requires the hairpin structure to be opened and typically involves nucleotide addition and deletion before formation of the coding joint. The factors involved in these processes include ubiquitously expressed proteins involved in the repair of DNA double strand breaks by nonhomologous end joining, terminal deoxynucleotidyl transferase, and Artemis protein. In addition to their critical roles in RSS recognition and DNA cleavage, the RAG proteins may perform two distinct types of functions in the postcleavage phase of V(D)J. A structural function has been inferred from the finding that, after DNA cleavage in vitro, the DNA ends remain associated with the RAG proteins in a "four end" complex known as the cleaved signal complex. After release of the coding ends in vitro, and after coding joint formation in vivo, the RAG proteins remain in a stable signal end complex (SEC) containing the two signal ends. These postcleavage complexes may serve as essential scaffolds for the second phase of the reaction, with the RAG proteins acting to organise the DNA processing and joining events. The second type of RAG protein-mediated postcleavage activity is the catalysis of phosphodiester bond hydrolysis and strand transfer reactions. The RAG proteins are capable of opening hairpin coding ends in vitro. The RAG proteins also show 3' flap endonuclease activity that may contribute to coding end processing/joining and can utilise the 3' OH group on the signal ends to attack hairpin coding ends (forming hybrid or open/shut joints) or virtually any DNA duplex (forming a transposition product).; GO: 0003677 DNA binding, 0006310 DNA recombination, 0005634 nucleus |
| >smart00612 Kelch Kelch domain | Back alignment and domain information |
|---|
Probab=97.78 E-value=4.2e-05 Score=57.16 Aligned_cols=45 Identities=22% Similarity=0.302 Sum_probs=38.6
Q ss_pred EEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEe
Q 004198 165 YLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASAR 214 (769)
Q Consensus 165 ~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~ 214 (769)
+||++||.+....++++++||+.++ +|+.++++ |.+|..|++++.
T Consensus 1 ~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~---~~~r~~~~~~~~ 45 (47)
T smart00612 1 KIYVVGGFDGGQRLKSVEVYDPETN--KWTPLPSM---PTPRSGHGVAVI 45 (47)
T ss_pred CEEEEeCCCCCceeeeEEEECCCCC--eEccCCCC---CCccccceEEEe
Confidence 3899999887778899999999999 99998865 788988887754
|
|
| >cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.74 E-value=5.3e-05 Score=75.15 Aligned_cols=66 Identities=24% Similarity=0.323 Sum_probs=44.8
Q ss_pred EEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCCh-HHHHHHHHHhhhcCCCceEEecCCcchhhh
Q 004198 583 VKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHS-LETITLLLALKIEYPENVHLIRGNHEAADI 660 (769)
Q Consensus 583 i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s-~e~l~ll~~lk~~~p~~v~llrGNHE~~~~ 660 (769)
|.++|||||++..+.+ ........+ -+|+.||++++|... .+.+..|.. .+..++++.||||....
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D------~vv~~GDl~~~~~~~~~~~~~~l~~----~~~p~~~v~GNHD~~~~ 67 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEAD------AVIVAGDITNFGGKEAAVEINLLLA----IGVPVLAVPGNCDTPEI 67 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCC------EEEECCCccCcCCHHHHHHHHHHHh----cCCCEEEEcCCCCCHHH
Confidence 5789999999998876 222211112 688899999998763 333333333 24569999999997644
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina |
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.073 Score=59.51 Aligned_cols=229 Identities=18% Similarity=0.218 Sum_probs=128.3
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCc--EEEecCCCCCC-----cccccceEEEECCEEEEECc
Q 004198 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRK--WTRIRPAGEPP-----SPRAAHAAAAVGTMVVFQGG 117 (769)
Q Consensus 45 ~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~--W~~l~~~g~~P-----~~R~~hs~~~~~~~Iyv~GG 117 (769)
++++|+.+. .+.+++||..+++ |+.-....... .++...+.+..++.||+.+.
T Consensus 69 ~~~vy~~~~--------------------~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~~~~v~v~~~ 128 (394)
T PRK11138 69 YNKVYAADR--------------------AGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTVAGGKVYIGSE 128 (394)
T ss_pred CCEEEEECC--------------------CCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEEECCEEEEEcC
Confidence 789998654 2468999998765 98543220000 11233345666889988543
Q ss_pred cCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcC
Q 004198 118 IGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLN 197 (769)
Q Consensus 118 ~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~ 197 (769)
...+++||..+.+..|+.-.. + .. .+..++.+..+|+..+ ...++.||.++....|+.-.
T Consensus 129 -------~g~l~ald~~tG~~~W~~~~~-~----~~--~ssP~v~~~~v~v~~~------~g~l~ald~~tG~~~W~~~~ 188 (394)
T PRK11138 129 -------KGQVYALNAEDGEVAWQTKVA-G----EA--LSRPVVSDGLVLVHTS------NGMLQALNESDGAVKWTVNL 188 (394)
T ss_pred -------CCEEEEEECCCCCCcccccCC-C----ce--ecCCEEECCEEEEECC------CCEEEEEEccCCCEeeeecC
Confidence 235999999998888976521 1 11 1222333446666432 23599999999988898854
Q ss_pred CCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCC-------cccceEEEEeCCE
Q 004198 198 PEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPS-------PRYQHAAVFVGAR 270 (769)
Q Consensus 198 ~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~-------~R~~hs~~~~~~~ 270 (769)
.... ...+.. +..++.++.+|+..+. ..++.++.. +++-.|......+.. .....+-++.++.
T Consensus 189 ~~~~-~~~~~~-~sP~v~~~~v~~~~~~-------g~v~a~d~~-~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~ 258 (394)
T PRK11138 189 DVPS-LTLRGE-SAPATAFGGAIVGGDN-------GRVSAVLME-QGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGV 258 (394)
T ss_pred CCCc-ccccCC-CCCEEECCEEEEEcCC-------CEEEEEEcc-CChhhheeccccCCCccchhcccccCCCcEEECCE
Confidence 3210 011111 1222345666664321 346677765 444455433221111 0112344566888
Q ss_pred EEEEecccCCCCcccCCCcEEEEECCCCc--EEeccCCccCCCCCCCCCCCCCccCcccccceEEEEeCCEEEEEcCcCC
Q 004198 271 LHVTGGALRGGRAIEGEAAVAVLDTAAGV--WLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKG 348 (769)
Q Consensus 271 i~V~GG~~~~~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~~~~iyv~GG~~~ 348 (769)
+|+.+. ...++++|+.+++ |+.-.. . . ...+..+++||+....
T Consensus 259 vy~~~~----------~g~l~ald~~tG~~~W~~~~~--~------------------~---~~~~~~~~~vy~~~~~-- 303 (394)
T PRK11138 259 VYALAY----------NGNLVALDLRSGQIVWKREYG--S------------------V---NDFAVDGGRIYLVDQN-- 303 (394)
T ss_pred EEEEEc----------CCeEEEEECCCCCEEEeecCC--C------------------c---cCcEEECCEEEEEcCC--
Confidence 888653 2358999998864 875211 1 1 1245678899987532
Q ss_pred CccccceEEecCCC
Q 004198 349 DILLDDFLVAENSP 362 (769)
Q Consensus 349 ~~~~~D~~~ld~~~ 362 (769)
..++.+|..+
T Consensus 304 ----g~l~ald~~t 313 (394)
T PRK11138 304 ----DRVYALDTRG 313 (394)
T ss_pred ----CeEEEEECCC
Confidence 3467777654
|
|
| >cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.47 E-value=9.7e-05 Score=72.00 Aligned_cols=67 Identities=27% Similarity=0.231 Sum_probs=44.7
Q ss_pred EEEEccCCCCHHHHHHHHHH-hCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchh
Q 004198 583 VKVFGDLHGQFGDLMRLFDE-YGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAA 658 (769)
Q Consensus 583 i~viGDiHG~~~~l~~~l~~-~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~ 658 (769)
+.+++|||+....+...+.. ......+ -++++||+++++.....+. ++.. ...+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d------~li~~GDi~~~~~~~~~~~-~~~~--~~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDAD------ILVLAGDIGYLTDAPRFAP-LLLA--LKGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCC------EEEECCCCCCCcchHHHHH-HHHh--hcCCccEEEeCCCcceE
Confidence 46899999998777655421 1111111 5788999999987665544 2222 23346799999999985
|
MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t |
| >PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00031 Score=74.31 Aligned_cols=69 Identities=19% Similarity=0.062 Sum_probs=48.7
Q ss_pred CEEEEccCCCC----HHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCC--CChHHHHHHHHHhhhcCCCceEEecCCc
Q 004198 582 PVKVFGDLHGQ----FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRG--QHSLETITLLLALKIEYPENVHLIRGNH 655 (769)
Q Consensus 582 ~i~viGDiHG~----~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG--~~s~e~l~ll~~lk~~~p~~v~llrGNH 655 (769)
.|.+++|||.. ...+.++++.......+ -++++||++|++ ....++..+|..|+... .++.+.|||
T Consensus 51 rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pD------lVli~GD~~d~~~~~~~~~~~~~L~~L~~~~--pv~~V~GNH 122 (271)
T PRK11340 51 KILFLADLHYSRFVPLSLISDAIALGIEQKPD------LILLGGDYVLFDMPLNFSAFSDVLSPLAECA--PTFACFGNH 122 (271)
T ss_pred EEEEEcccCCCCcCCHHHHHHHHHHHHhcCCC------EEEEccCcCCCCccccHHHHHHHHHHHhhcC--CEEEecCCC
Confidence 48999999976 45567777665432222 678899999953 33345667777776544 499999999
Q ss_pred chh
Q 004198 656 EAA 658 (769)
Q Consensus 656 E~~ 658 (769)
|..
T Consensus 123 D~~ 125 (271)
T PRK11340 123 DRP 125 (271)
T ss_pred Ccc
Confidence 974
|
|
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.08 Score=59.23 Aligned_cols=217 Identities=16% Similarity=0.184 Sum_probs=120.0
Q ss_pred CcEEEEECCCCc--EEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 75 NSVHLYDVLTRK--WTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 75 ~dv~~yD~~~~~--W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
+.++++|..+++ |+.-... . ...+-+..++.||+..+ ...++.||..+.+..|..-.. .+....
T Consensus 130 g~l~ald~~tG~~~W~~~~~~----~--~~ssP~v~~~~v~v~~~-------~g~l~ald~~tG~~~W~~~~~-~~~~~~ 195 (394)
T PRK11138 130 GQVYALNAEDGEVAWQTKVAG----E--ALSRPVVSDGLVLVHTS-------NGMLQALNESDGAVKWTVNLD-VPSLTL 195 (394)
T ss_pred CEEEEEECCCCCCcccccCCC----c--eecCCEEECCEEEEECC-------CCEEEEEEccCCCEeeeecCC-CCcccc
Confidence 579999998875 9854321 1 11223445778887543 235999999998888987531 111111
Q ss_pred ccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCC--CCCCCccc--ccEEEEecCCEEEEEcccCCC
Q 004198 153 RYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPE--GDRPSARM--YATASARSDGMFLLCGGRDAS 228 (769)
Q Consensus 153 R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~--~~~P~~r~--~hsa~~~~~g~l~v~GG~~~~ 228 (769)
+...+-++..+ .+|+..+ + ..++.+|.++....|+.-... +.....|. ..+..+..++.+|+.+. +
T Consensus 196 ~~~~sP~v~~~-~v~~~~~-~-----g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~-~-- 265 (394)
T PRK11138 196 RGESAPATAFG-GAIVGGD-N-----GRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAY-N-- 265 (394)
T ss_pred cCCCCCEEECC-EEEEEcC-C-----CEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEc-C--
Confidence 11122223333 5555332 2 358889998887789753211 00000011 11222345778887542 1
Q ss_pred CCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCC--cEEeccCC
Q 004198 229 GAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAG--VWLDRNGL 306 (769)
Q Consensus 229 ~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~--~W~~~~~~ 306 (769)
..++.+|.. +++-.|....+.. ...++.++.+|+... ...++++|++++ .|+.-...
T Consensus 266 ----g~l~ald~~-tG~~~W~~~~~~~------~~~~~~~~~vy~~~~----------~g~l~ald~~tG~~~W~~~~~~ 324 (394)
T PRK11138 266 ----GNLVALDLR-SGQIVWKREYGSV------NDFAVDGGRIYLVDQ----------NDRVYALDTRGGVELWSQSDLL 324 (394)
T ss_pred ----CeEEEEECC-CCCEEEeecCCCc------cCcEEECCEEEEEcC----------CCeEEEEECCCCcEEEcccccC
Confidence 357888876 3454565543221 134567899998753 245999999876 48642211
Q ss_pred ccCCCCCCCCCCCCCccCcccccceEEEEeCCEEEEEcCcCCCccccceEEecCCC
Q 004198 307 VTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLDDFLVAENSP 362 (769)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~~~~iyv~GG~~~~~~~~D~~~ld~~~ 362 (769)
.+...+.++.+++||+... ++ .++.+|..+
T Consensus 325 --------------------~~~~~sp~v~~g~l~v~~~-~G-----~l~~ld~~t 354 (394)
T PRK11138 325 --------------------HRLLTAPVLYNGYLVVGDS-EG-----YLHWINRED 354 (394)
T ss_pred --------------------CCcccCCEEECCEEEEEeC-CC-----EEEEEECCC
Confidence 2333445567888887432 32 355666554
|
|
| >cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00039 Score=71.10 Aligned_cols=70 Identities=29% Similarity=0.289 Sum_probs=49.1
Q ss_pred CEEEEccCCCCHH----HHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChH-HHHHHHHHhhhcCCCceEEecCCcc
Q 004198 582 PVKVFGDLHGQFG----DLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSL-ETITLLLALKIEYPENVHLIRGNHE 656 (769)
Q Consensus 582 ~i~viGDiHG~~~----~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~-e~l~ll~~lk~~~p~~v~llrGNHE 656 (769)
.+.+++|+|.... .+.++++.+.....+ -+++.||++|.+.... ++..++..++ .+..++++.||||
T Consensus 3 ~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d------~vl~~GD~~~~~~~~~~~~~~~l~~l~--~~~~v~~v~GNHD 74 (223)
T cd07385 3 RIAHLSDLHLGPFVSRERLERLVEKINALKPD------LVVLTGDLVDGSVDVLELLLELLKKLK--APLGVYAVLGNHD 74 (223)
T ss_pred EEEEEeecCCCccCCHHHHHHHHHHHhccCCC------EEEEcCcccCCcchhhHHHHHHHhccC--CCCCEEEECCCcc
Confidence 4889999998743 566666665432222 6788999999987764 5555555543 3356999999999
Q ss_pred hhh
Q 004198 657 AAD 659 (769)
Q Consensus 657 ~~~ 659 (769)
...
T Consensus 75 ~~~ 77 (223)
T cd07385 75 YYS 77 (223)
T ss_pred ccc
Confidence 743
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia |
| >cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.00077 Score=62.80 Aligned_cols=57 Identities=19% Similarity=0.144 Sum_probs=39.9
Q ss_pred EEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcch
Q 004198 584 KVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEA 657 (769)
Q Consensus 584 ~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~ 657 (769)
.|++|.||..+.+.++.... ...+ .++++||+. .+++..+..++ ...++.++||||.
T Consensus 1 ~viSDtH~~~~~~~~~~~~~--~~~d------~ii~~GD~~------~~~~~~~~~~~---~~~~~~V~GN~D~ 57 (129)
T cd07403 1 LVISDTESPALYSPEIKVRL--EGVD------LILSAGDLP------KEYLEYLVTML---NVPVYYVHGNHDV 57 (129)
T ss_pred CeeccccCccccchHHHhhC--CCCC------EEEECCCCC------hHHHHHHHHHc---CCCEEEEeCCCcc
Confidence 38999999988777766652 2222 789999983 34556665542 2358999999994
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >TIGR01640 F_box_assoc_1 F-box protein interaction domain | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.068 Score=54.91 Aligned_cols=203 Identities=8% Similarity=0.042 Sum_probs=105.4
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccc-eEEEEC----C-EEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAH-AAAAVG----T-MVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQ 148 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~h-s~~~~~----~-~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~ 148 (769)
..++++||.|++|..|+....++.....+ .....+ . +|+.+...... .....+.+|++.+ .+|..+.. .
T Consensus 14 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~G~d~~~~~YKVv~~~~~~~~-~~~~~~~Vys~~~--~~Wr~~~~--~ 88 (230)
T TIGR01640 14 KRLVVWNPSTGQSRWLPTPKSRRSNKESDTYFLGYDPIEKQYKVLCFSDRSGN-RNQSEHQVYTLGS--NSWRTIEC--S 88 (230)
T ss_pred CcEEEECCCCCCEEecCCCCCcccccccceEEEeecccCCcEEEEEEEeecCC-CCCccEEEEEeCC--CCcccccc--C
Confidence 36889999999999997531110001111 111122 2 55555442111 1345789999999 57999852 1
Q ss_pred CCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEE-cCCCCCCCCccc---ccEEEEecCCEEEEEcc
Q 004198 149 GPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQR-LNPEGDRPSARM---YATASARSDGMFLLCGG 224 (769)
Q Consensus 149 ~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~-v~~~~~~P~~r~---~hsa~~~~~g~l~v~GG 224 (769)
.+........+.+++ .+|-+...........+..||+.+. +|.. ++. |..+. .+...+..+|+|.+...
T Consensus 89 ~~~~~~~~~~v~~~G-~lyw~~~~~~~~~~~~IvsFDl~~E--~f~~~i~~----P~~~~~~~~~~~L~~~~G~L~~v~~ 161 (230)
T TIGR01640 89 PPHHPLKSRGVCING-VLYYLAYTLKTNPDYFIVSFDVSSE--RFKEFIPL----PCGNSDSVDYLSLINYKGKLAVLKQ 161 (230)
T ss_pred CCCccccCCeEEECC-EEEEEEEECCCCCcEEEEEEEcccc--eEeeeeec----CccccccccceEEEEECCEEEEEEe
Confidence 222111222445555 5555553322111126888999999 7884 432 22211 12334445688877665
Q ss_pred cCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccc----eEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCC
Q 004198 225 RDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQ----HAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAG 298 (769)
Q Consensus 225 ~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~----hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~ 298 (769)
.... ..-++|.++......|+....-..++.++.. ...+..+++|++.... .. ..-+.+||+.++
T Consensus 162 ~~~~--~~~~IWvl~d~~~~~W~k~~~i~~~~~~~~~~~~~~~~~~~~g~I~~~~~~-~~------~~~~~~y~~~~~ 230 (230)
T TIGR01640 162 KKDT--NNFDLWVLNDAGKQEWSKLFTVPIPPLPDLVDDNFLSGFTDKGEIVLCCED-EN------PFYIFYYNVGEN 230 (230)
T ss_pred cCCC--CcEEEEEECCCCCCceeEEEEEcCcchhhhhhheeEeEEeeCCEEEEEeCC-CC------ceEEEEEeccCC
Confidence 3221 1268999875544455532221222222222 2233447888877652 10 113889998764
|
This model describes a large family of plant domains, with several hundred members in Arabidopsis thaliana. Most examples are found C-terminal to an F-box (pfam00646), a 60 amino acid motif involved in ubiquitination of target proteins to mark them for degradation. Two-hybid experiments support the idea that most members are interchangeable F-box subunits of SCF E3 complexes. Some members have two copies of this domain. |
| >cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0012 Score=64.49 Aligned_cols=40 Identities=35% Similarity=0.525 Sum_probs=29.9
Q ss_pred eEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhh
Q 004198 616 DYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADI 660 (769)
Q Consensus 616 ~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~ 660 (769)
.++++||+++++..... +.++.++ +..+++++||||....
T Consensus 45 ~vi~~GDl~~~~~~~~~-~~~l~~~----~~~~~~v~GNHD~~~~ 84 (168)
T cd07390 45 TVYHLGDFSFGGKAGTE-LELLSRL----NGRKHLIKGNHDSSLE 84 (168)
T ss_pred EEEEeCCCCCCCChHHH-HHHHHhC----CCCeEEEeCCCCchhh
Confidence 78999999999986644 4444443 3469999999997543
|
This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d |
| >PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.00053 Score=71.25 Aligned_cols=69 Identities=22% Similarity=0.291 Sum_probs=45.8
Q ss_pred CEEEEccCCCCH------HHHHHHHHHhCCCCCCCCCcceeEEEeccccCC--C-----CChHHHHHHHHHhhhcCCCce
Q 004198 582 PVKVFGDLHGQF------GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDR--G-----QHSLETITLLLALKIEYPENV 648 (769)
Q Consensus 582 ~i~viGDiHG~~------~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDr--G-----~~s~e~l~ll~~lk~~~p~~v 648 (769)
++++++|+|... ..+.++++.....+ + .++++||++|. | +...+++.+|..|+.. +-.+
T Consensus 2 ~i~~iSDlHl~~~~~~~~~~~~~~l~~~~~~~-d------~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~-g~~v 73 (241)
T PRK05340 2 PTLFISDLHLSPERPAITAAFLRFLRGEARQA-D------ALYILGDLFEAWIGDDDPSPFAREIAAALKALSDS-GVPC 73 (241)
T ss_pred cEEEEeecCCCCCChhHHHHHHHHHHhhhccC-C------EEEEccceeccccccCcCCHHHHHHHHHHHHHHHc-CCeE
Confidence 488999999542 23455554322111 1 68889999985 2 3346777777777633 3479
Q ss_pred EEecCCcchh
Q 004198 649 HLIRGNHEAA 658 (769)
Q Consensus 649 ~llrGNHE~~ 658 (769)
++++||||..
T Consensus 74 ~~v~GNHD~~ 83 (241)
T PRK05340 74 YFMHGNRDFL 83 (241)
T ss_pred EEEeCCCchh
Confidence 9999999964
|
|
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.29 Score=50.00 Aligned_cols=216 Identities=19% Similarity=0.283 Sum_probs=121.2
Q ss_pred CcEEEEECCCCc--EEEecCCCCCCcccccce--EEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCC
Q 004198 75 NSVHLYDVLTRK--WTRIRPAGEPPSPRAAHA--AAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGP 150 (769)
Q Consensus 75 ~dv~~yD~~~~~--W~~l~~~g~~P~~R~~hs--~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p 150 (769)
+.+.++|+.+++ |+.-. + .+..+.. .+..++.+|+..+ ...++++|..+.+..|+.-. +
T Consensus 3 g~l~~~d~~tG~~~W~~~~--~---~~~~~~~~~~~~~~~~v~~~~~-------~~~l~~~d~~tG~~~W~~~~-----~ 65 (238)
T PF13360_consen 3 GTLSALDPRTGKELWSYDL--G---PGIGGPVATAVPDGGRVYVASG-------DGNLYALDAKTGKVLWRFDL-----P 65 (238)
T ss_dssp SEEEEEETTTTEEEEEEEC--S---SSCSSEEETEEEETTEEEEEET-------TSEEEEEETTTSEEEEEEEC-----S
T ss_pred CEEEEEECCCCCEEEEEEC--C---CCCCCccceEEEeCCEEEEEcC-------CCEEEEEECCCCCEEEEeec-----c
Confidence 468899998875 88632 1 1122222 3346889998742 36699999999878898773 2
Q ss_pred CCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEE-EcCCCCCCCCcccccEEEEecCCEEEEEcccCCCC
Q 004198 151 GPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQ-RLNPEGDRPSARMYATASARSDGMFLLCGGRDASG 229 (769)
Q Consensus 151 ~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~-~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~ 229 (769)
.+-... ....+ +.+|+..+. +.++++|..+....|+ ...... +............++.+|+...
T Consensus 66 ~~~~~~-~~~~~-~~v~v~~~~------~~l~~~d~~tG~~~W~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~----- 130 (238)
T PF13360_consen 66 GPISGA-PVVDG-GRVYVGTSD------GSLYALDAKTGKVLWSIYLTSSP--PAGVRSSSSPAVDGDRLYVGTS----- 130 (238)
T ss_dssp SCGGSG-EEEET-TEEEEEETT------SEEEEEETTTSCEEEEEEE-SSC--TCSTB--SEEEEETTEEEEEET-----
T ss_pred ccccce-eeecc-cccccccce------eeeEecccCCcceeeeecccccc--ccccccccCceEecCEEEEEec-----
Confidence 221222 33444 477766521 2799999999988999 454321 1222222223334666666543
Q ss_pred CcccceEEEecCCCCceEEEeCCCCCCCc-------ccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCc--E
Q 004198 230 APLADAYGLLMHRNGQWEWTLAPGVAPSP-------RYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGV--W 300 (769)
Q Consensus 230 ~~l~d~~~ld~~~~~~W~W~~~~~~~P~~-------R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~--W 300 (769)
-..++.+|.. +|+-.|......++.. ......++.++.+|+..+.. .+..+|.++++ |
T Consensus 131 --~g~l~~~d~~-tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g----------~~~~~d~~tg~~~w 197 (238)
T PF13360_consen 131 --SGKLVALDPK-TGKLLWKYPVGEPRGSSPISSFSDINGSPVISDGRVYVSSGDG----------RVVAVDLATGEKLW 197 (238)
T ss_dssp --CSEEEEEETT-TTEEEEEEESSTT-SS--EEEETTEEEEEECCTTEEEEECCTS----------SEEEEETTTTEEEE
T ss_pred --cCcEEEEecC-CCcEEEEeecCCCCCCcceeeecccccceEEECCEEEEEcCCC----------eEEEEECCCCCEEE
Confidence 3567888876 3444555543332211 11234444467888876521 25666999987 8
Q ss_pred EeccCCccCCCCCCCCCCCCCccCcccccceEEEEeCCEEEEEcCcCCCccccceEEecCCCC
Q 004198 301 LDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLDDFLVAENSPF 363 (769)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~~~~iyv~GG~~~~~~~~D~~~ld~~~~ 363 (769)
+.. .. -........++.||+.. .+ ..++.+|.++-
T Consensus 198 ~~~--~~--------------------~~~~~~~~~~~~l~~~~-~~-----~~l~~~d~~tG 232 (238)
T PF13360_consen 198 SKP--IS--------------------GIYSLPSVDGGTLYVTS-SD-----GRLYALDLKTG 232 (238)
T ss_dssp EEC--SS---------------------ECECEECCCTEEEEEE-TT-----TEEEEEETTTT
T ss_pred Eec--CC--------------------CccCCceeeCCEEEEEe-CC-----CEEEEEECCCC
Confidence 443 21 11122445567777776 32 44667776653
|
... |
| >TIGR03729 acc_ester putative phosphoesterase | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0011 Score=68.68 Aligned_cols=68 Identities=25% Similarity=0.190 Sum_probs=46.0
Q ss_pred CEEEEccCCCCH------HHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCc
Q 004198 582 PVKVFGDLHGQF------GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNH 655 (769)
Q Consensus 582 ~i~viGDiHG~~------~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNH 655 (769)
.|.+++|+|..+ ..|.++++.+.....+ -+|+.||++++.+.+.+.+..+..+ .+..++++.|||
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d------~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNH 71 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKID------HLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNH 71 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCC------EEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCC
Confidence 378999999653 2245566655322222 5888999999876666666555543 345799999999
Q ss_pred chh
Q 004198 656 EAA 658 (769)
Q Consensus 656 E~~ 658 (769)
|..
T Consensus 72 D~~ 74 (239)
T TIGR03729 72 DML 74 (239)
T ss_pred CCC
Confidence 964
|
Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system. |
| >cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0025 Score=60.33 Aligned_cols=41 Identities=32% Similarity=0.409 Sum_probs=28.0
Q ss_pred eEEEeccccCCCCCh--HHHHHHHHHhhhcCCCceEEecCCcch
Q 004198 616 DYLFLGDYVDRGQHS--LETITLLLALKIEYPENVHLIRGNHEA 657 (769)
Q Consensus 616 ~~vfLGD~vDrG~~s--~e~l~ll~~lk~~~p~~v~llrGNHE~ 657 (769)
-++++||+++.|... .+...++..++... ..+++++||||.
T Consensus 38 ~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD~ 80 (144)
T cd07400 38 LVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHDV 80 (144)
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCeE
Confidence 688899999988742 22334444443221 379999999997
|
YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv |
| >TIGR01640 F_box_assoc_1 F-box protein interaction domain | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.11 Score=53.35 Aligned_cols=187 Identities=10% Similarity=0.137 Sum_probs=101.0
Q ss_pred CCcccccceeecCCCCCCCcc--ccEEEEecccC-CCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcE
Q 004198 11 PSYRTLETYWDTDEDAPGPRC--GHTLTAVAATK-TTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKW 87 (769)
Q Consensus 11 ~~y~~~~~~w~~~~~~P~~R~--ght~~~v~~~~-~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W 87 (769)
-.+||.|++|..++..+.++. +.....++-.. ...=|++-+....... ....+.+|+..++.|
T Consensus 17 ~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~G~d~~~~~YKVv~~~~~~~~~--------------~~~~~~Vys~~~~~W 82 (230)
T TIGR01640 17 VVWNPSTGQSRWLPTPKSRRSNKESDTYFLGYDPIEKQYKVLCFSDRSGNR--------------NQSEHQVYTLGSNSW 82 (230)
T ss_pred EEECCCCCCEEecCCCCCcccccccceEEEeecccCCcEEEEEEEeecCCC--------------CCccEEEEEeCCCCc
Confidence 357899999999976554321 11011221111 1122555554321110 235789999999999
Q ss_pred EEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEE-eeecCCCCCCcc----ccEEEEEC
Q 004198 88 TRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHR-VVVQGQGPGPRY----GHVMDLVS 162 (769)
Q Consensus 88 ~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~-~~~~g~~p~~R~----~hs~~~~~ 162 (769)
+.+... ++........+.+++.+|-+...... .....+..||+.+ .+|.. ++ +|..+. ...++.++
T Consensus 83 r~~~~~--~~~~~~~~~~v~~~G~lyw~~~~~~~-~~~~~IvsFDl~~--E~f~~~i~----~P~~~~~~~~~~~L~~~~ 153 (230)
T TIGR01640 83 RTIECS--PPHHPLKSRGVCINGVLYYLAYTLKT-NPDYFIVSFDVSS--ERFKEFIP----LPCGNSDSVDYLSLINYK 153 (230)
T ss_pred cccccC--CCCccccCCeEEECCEEEEEEEECCC-CCcEEEEEEEccc--ceEeeeee----cCccccccccceEEEEEC
Confidence 998742 22211222367788888887753221 1112699999999 56884 53 333322 33555666
Q ss_pred CcEEEEEecCCCCCccCceeEEe-CCCCCceEEEcCCCCCCCCccc---ccEEEEecCCEEEEEcc
Q 004198 163 QRYLVSVSGNDGKRVLSDAWALD-TAQKPYVWQRLNPEGDRPSARM---YATASARSDGMFLLCGG 224 (769)
Q Consensus 163 ~~~l~v~GG~~~~~~~~dv~~~d-~~~~~~~W~~v~~~~~~P~~r~---~hsa~~~~~g~l~v~GG 224 (769)
+ .|.++...... ..-++|+++ .... +|++.-.....+.++. ........+|.+++...
T Consensus 154 G-~L~~v~~~~~~-~~~~IWvl~d~~~~--~W~k~~~i~~~~~~~~~~~~~~~~~~~~g~I~~~~~ 215 (230)
T TIGR01640 154 G-KLAVLKQKKDT-NNFDLWVLNDAGKQ--EWSKLFTVPIPPLPDLVDDNFLSGFTDKGEIVLCCE 215 (230)
T ss_pred C-EEEEEEecCCC-CcEEEEEECCCCCC--ceeEEEEEcCcchhhhhhheeEeEEeeCCEEEEEeC
Confidence 4 66665543321 125789886 4344 6988654432122222 12334556777777654
|
This model describes a large family of plant domains, with several hundred members in Arabidopsis thaliana. Most examples are found C-terminal to an F-box (pfam00646), a 60 amino acid motif involved in ubiquitination of target proteins to mark them for degradation. Two-hybid experiments support the idea that most members are interchangeable F-box subunits of SCF E3 complexes. Some members have two copies of this domain. |
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.61 Score=47.59 Aligned_cols=184 Identities=20% Similarity=0.234 Sum_probs=105.1
Q ss_pred CCcEEEEECCCCc--EEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEE-eeecCCCC
Q 004198 74 TNSVHLYDVLTRK--WTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHR-VVVQGQGP 150 (769)
Q Consensus 74 ~~dv~~yD~~~~~--W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~-~~~~g~~p 150 (769)
.+.++++|..+++ |+.-... +.....+..++.||+..+. +.++++|..+.+..|+. ... .+..
T Consensus 45 ~~~l~~~d~~tG~~~W~~~~~~------~~~~~~~~~~~~v~v~~~~-------~~l~~~d~~tG~~~W~~~~~~-~~~~ 110 (238)
T PF13360_consen 45 DGNLYALDAKTGKVLWRFDLPG------PISGAPVVDGGRVYVGTSD-------GSLYALDAKTGKVLWSIYLTS-SPPA 110 (238)
T ss_dssp TSEEEEEETTTSEEEEEEECSS------CGGSGEEEETTEEEEEETT-------SEEEEEETTTSCEEEEEEE-S-SCTC
T ss_pred CCEEEEEECCCCCEEEEeeccc------cccceeeecccccccccce-------eeeEecccCCcceeeeecccc-cccc
Confidence 3689999998875 8765421 1222246778888887632 26999999998889994 432 1111
Q ss_pred CCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCc--cc--ccEEEEecCCEEEEEcccC
Q 004198 151 GPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSA--RM--YATASARSDGMFLLCGGRD 226 (769)
Q Consensus 151 ~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~--r~--~hsa~~~~~g~l~v~GG~~ 226 (769)
..+...+..+. ++.+|+... ...++++|++++...|+.-...+..... .. ..+..+..++.+|++.+..
T Consensus 111 ~~~~~~~~~~~-~~~~~~~~~------~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g 183 (238)
T PF13360_consen 111 GVRSSSSPAVD-GDRLYVGTS------SGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVISDGRVYVSSGDG 183 (238)
T ss_dssp STB--SEEEEE-TTEEEEEET------CSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECCTTEEEEECCTS
T ss_pred ccccccCceEe-cCEEEEEec------cCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEECCEEEEEcCCC
Confidence 12233344334 446666543 3568999999887789886533110000 00 1123344567888876532
Q ss_pred CCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCc--EE
Q 004198 227 ASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGV--WL 301 (769)
Q Consensus 227 ~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~--W~ 301 (769)
.+..+|..+. .-.|...... ........++.+|+.. . ...++++|.++++ |+
T Consensus 184 -------~~~~~d~~tg-~~~w~~~~~~-----~~~~~~~~~~~l~~~~-~---------~~~l~~~d~~tG~~~W~ 237 (238)
T PF13360_consen 184 -------RVVAVDLATG-EKLWSKPISG-----IYSLPSVDGGTLYVTS-S---------DGRLYALDLKTGKVVWQ 237 (238)
T ss_dssp -------SEEEEETTTT-EEEEEECSS------ECECEECCCTEEEEEE-T---------TTEEEEEETTTTEEEEE
T ss_pred -------eEEEEECCCC-CEEEEecCCC-----ccCCceeeCCEEEEEe-C---------CCEEEEEECCCCCEEeE
Confidence 2566766544 4346333111 1122344577777775 2 2459999999874 64
|
... |
| >cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0029 Score=66.81 Aligned_cols=72 Identities=22% Similarity=0.335 Sum_probs=46.4
Q ss_pred CEEEEccCC-CC------------HHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCC-hHHHHHHHHHhhhcCCCc
Q 004198 582 PVKVFGDLH-GQ------------FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQH-SLETITLLLALKIEYPEN 647 (769)
Q Consensus 582 ~i~viGDiH-G~------------~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~-s~e~l~ll~~lk~~~p~~ 647 (769)
.+.+++|+| +. ...|.++++.+.....+ -+|++||+++.|.. +.+-+..++++-...+-.
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d------~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p 75 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLD------FVVQLGDIIDGDNARAEEALDAVLAILDRLKGP 75 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCC------EEEECCCeecCCCchHHHHHHHHHHHHHhcCCC
Confidence 378999999 22 35566677766432222 57889999998873 333343333333233357
Q ss_pred eEEecCCcchhh
Q 004198 648 VHLIRGNHEAAD 659 (769)
Q Consensus 648 v~llrGNHE~~~ 659 (769)
++++.||||...
T Consensus 76 ~~~v~GNHD~~~ 87 (267)
T cd07396 76 VHHVLGNHDLYN 87 (267)
T ss_pred EEEecCcccccc
Confidence 999999999754
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.55 Score=52.05 Aligned_cols=180 Identities=21% Similarity=0.183 Sum_probs=96.9
Q ss_pred CcEEEEECCCCc--EEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecC--CCC
Q 004198 75 NSVHLYDVLTRK--WTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQG--QGP 150 (769)
Q Consensus 75 ~dv~~yD~~~~~--W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g--~~p 150 (769)
+.++++|+.+++ |+.-... .....+...+.+..++.+|+ |.. ...++.+|+.+.+..|+.-.... ...
T Consensus 155 g~l~a~d~~tG~~~W~~~~~~-~~~~~~~~~sp~~~~~~v~~-~~~------~g~v~ald~~tG~~~W~~~~~~~~g~~~ 226 (377)
T TIGR03300 155 GRLTALDAATGERLWTYSRVT-PALTLRGSASPVIADGGVLV-GFA------GGKLVALDLQTGQPLWEQRVALPKGRTE 226 (377)
T ss_pred CeEEEEEcCCCceeeEEccCC-CceeecCCCCCEEECCEEEE-ECC------CCEEEEEEccCCCEeeeeccccCCCCCc
Confidence 468999998764 8754322 11111233344556666654 322 12589999998777887542100 000
Q ss_pred CCc---cccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCC
Q 004198 151 GPR---YGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDA 227 (769)
Q Consensus 151 ~~R---~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~ 227 (769)
..| ...+. .+.++.+|+.+. + ..+++||.++....|..-... ....+..++.+|+...
T Consensus 227 ~~~~~~~~~~p-~~~~~~vy~~~~-~-----g~l~a~d~~tG~~~W~~~~~~---------~~~p~~~~~~vyv~~~--- 287 (377)
T TIGR03300 227 LERLVDVDGDP-VVDGGQVYAVSY-Q-----GRVAALDLRSGRVLWKRDASS---------YQGPAVDDNRLYVTDA--- 287 (377)
T ss_pred hhhhhccCCcc-EEECCEEEEEEc-C-----CEEEEEECCCCcEEEeeccCC---------ccCceEeCCEEEEECC---
Confidence 001 11122 233446766442 2 359999999887789764211 1222345778887642
Q ss_pred CCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCc
Q 004198 228 SGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGV 299 (769)
Q Consensus 228 ~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~ 299 (769)
-..++.+|.. ++.-.|..... ..+...+.++.++.+|+... ...++++|..+++
T Consensus 288 ----~G~l~~~d~~-tG~~~W~~~~~---~~~~~ssp~i~g~~l~~~~~----------~G~l~~~d~~tG~ 341 (377)
T TIGR03300 288 ----DGVVVALDRR-SGSELWKNDEL---KYRQLTAPAVVGGYLVVGDF----------EGYLHWLSREDGS 341 (377)
T ss_pred ----CCeEEEEECC-CCcEEEccccc---cCCccccCEEECCEEEEEeC----------CCEEEEEECCCCC
Confidence 2457788875 33445544210 11223344556787776421 2358899987764
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.45 Score=52.71 Aligned_cols=183 Identities=17% Similarity=0.194 Sum_probs=100.6
Q ss_pred CcEEEEECCCCc--EEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 75 NSVHLYDVLTRK--WTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 75 ~dv~~yD~~~~~--W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
+.++++|..+++ |+.-... . ...+.+..++.+|+..+ ...++++|..+.+..|+.-.. ++....
T Consensus 115 g~l~ald~~tG~~~W~~~~~~-----~-~~~~p~v~~~~v~v~~~-------~g~l~a~d~~tG~~~W~~~~~-~~~~~~ 180 (377)
T TIGR03300 115 GEVIALDAEDGKELWRAKLSS-----E-VLSPPLVANGLVVVRTN-------DGRLTALDAATGERLWTYSRV-TPALTL 180 (377)
T ss_pred CEEEEEECCCCcEeeeeccCc-----e-eecCCEEECCEEEEECC-------CCeEEEEEcCCCceeeEEccC-CCceee
Confidence 579999998765 8754321 1 12233445778887543 234999999987778976531 111111
Q ss_pred ccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCC--CCCCccc--ccEEEEecCCEEEEEcccCCC
Q 004198 153 RYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEG--DRPSARM--YATASARSDGMFLLCGGRDAS 228 (769)
Q Consensus 153 R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~--~~P~~r~--~hsa~~~~~g~l~v~GG~~~~ 228 (769)
+...+.++.++ .+ ++|..+ ..++.+|+++....|+.-.... .....+. ..+...+.++.+|+.+.
T Consensus 181 ~~~~sp~~~~~-~v-~~~~~~-----g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~---- 249 (377)
T TIGR03300 181 RGSASPVIADG-GV-LVGFAG-----GKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSY---- 249 (377)
T ss_pred cCCCCCEEECC-EE-EEECCC-----CEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEc----
Confidence 22223334443 44 444432 2588999988877897532210 0000111 11122335777777542
Q ss_pred CCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCC--cEEe
Q 004198 229 GAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAG--VWLD 302 (769)
Q Consensus 229 ~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~--~W~~ 302 (769)
-..++.++.. ++.-.|...... ..+.++.++++|+... ...++++|..++ .|+.
T Consensus 250 ---~g~l~a~d~~-tG~~~W~~~~~~------~~~p~~~~~~vyv~~~----------~G~l~~~d~~tG~~~W~~ 305 (377)
T TIGR03300 250 ---QGRVAALDLR-SGRVLWKRDASS------YQGPAVDDNRLYVTDA----------DGVVVALDRRSGSELWKN 305 (377)
T ss_pred ---CCEEEEEECC-CCcEEEeeccCC------ccCceEeCCEEEEECC----------CCeEEEEECCCCcEEEcc
Confidence 1357888875 444456543211 1234456888888642 245899998776 4765
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0023 Score=66.02 Aligned_cols=68 Identities=15% Similarity=0.196 Sum_probs=42.9
Q ss_pred EEEEccCCCCH------HHHHHHHHHhCCCCCCCCCcceeEEEeccccCC--C---CC--hHHHHHHHHHhhhcCCCceE
Q 004198 583 VKVFGDLHGQF------GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDR--G---QH--SLETITLLLALKIEYPENVH 649 (769)
Q Consensus 583 i~viGDiHG~~------~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDr--G---~~--s~e~l~ll~~lk~~~p~~v~ 649 (769)
+++++|+|... ..+.+.+......+ + .++++||++|. | +. ..+++.+|..|+.. +..++
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~~~-d------~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~-~~~v~ 72 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEARKA-D------ALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQ-GVPCY 72 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhhccC-C------EEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHC-CCeEE
Confidence 36899999542 23444444432111 2 68889999995 2 11 23556666666533 35799
Q ss_pred EecCCcchh
Q 004198 650 LIRGNHEAA 658 (769)
Q Consensus 650 llrGNHE~~ 658 (769)
++.||||..
T Consensus 73 ~v~GNHD~~ 81 (231)
T TIGR01854 73 FMHGNRDFL 81 (231)
T ss_pred EEcCCCchh
Confidence 999999974
|
This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown. |
| >PRK04036 DNA polymerase II small subunit; Validated | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0054 Score=70.52 Aligned_cols=120 Identities=16% Similarity=0.137 Sum_probs=60.7
Q ss_pred CCEEEEccCC-CCH----HHHHHHHHHhC-CCCCCC--CCcceeEEEeccccCC-CCCh---------------HHHHHH
Q 004198 581 APVKVFGDLH-GQF----GDLMRLFDEYG-FPSTAG--DITYIDYLFLGDYVDR-GQHS---------------LETITL 636 (769)
Q Consensus 581 ~~i~viGDiH-G~~----~~l~~~l~~~~-~~~~~~--~~~~~~~vfLGD~vDr-G~~s---------------~e~l~l 636 (769)
..+.+++|+| |.. ..+.++++.+. ..+.+. ......+|++||++|. |.++ .++..+
T Consensus 244 ~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~~ 323 (504)
T PRK04036 244 VYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAEY 323 (504)
T ss_pred cEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHHH
Confidence 4589999999 652 22444444432 211100 0001168889999994 3221 134455
Q ss_pred HHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCCCchhhhHHHhHhhccccceEEEe-ceEEEEcCCC
Q 004198 637 LLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIE-KKIICMHGGI 710 (769)
Q Consensus 637 l~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~f~~lP~~~~i~-~~i~~vHgGi 710 (769)
|..+.. .-.|++++||||............+++..+-.. .-..++.. |....++ .+++++||-.
T Consensus 324 L~~L~~--~i~V~~ipGNHD~~~~~lPQ~~l~~~l~~~l~~-------~~v~~lsN-P~~i~l~G~~iLl~HG~~ 388 (504)
T PRK04036 324 LKQIPE--DIKIIISPGNHDAVRQAEPQPAFPEEIRSLFPE-------HNVTFVSN-PALVNLHGVDVLIYHGRS 388 (504)
T ss_pred HHhhhc--CCeEEEecCCCcchhhccCCCCccHHHHHhcCc-------CCeEEecC-CeEEEECCEEEEEECCCC
Confidence 555532 246999999999754332221112222221110 01223333 5444444 4789999875
|
|
| >cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0033 Score=65.83 Aligned_cols=70 Identities=20% Similarity=0.299 Sum_probs=43.6
Q ss_pred EEEEccCCCCHHHHHHHHHHhC---CCCCCCCCcceeEEEeccccCCCC-ChHHHHH------HHHHh------hhcCCC
Q 004198 583 VKVFGDLHGQFGDLMRLFDEYG---FPSTAGDITYIDYLFLGDYVDRGQ-HSLETIT------LLLAL------KIEYPE 646 (769)
Q Consensus 583 i~viGDiHG~~~~l~~~l~~~~---~~~~~~~~~~~~~vfLGD~vDrG~-~s~e~l~------ll~~l------k~~~p~ 646 (769)
|+|+||+||++..+.+.++... ..+.+ -+|++||+-..+. ..++.+. -+..+ ..+.|-
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D------~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~ 74 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVD------LLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPI 74 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCc------EEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCe
Confidence 6899999999988876544432 12222 5788999975443 3333331 11111 223566
Q ss_pred ceEEecCCcchh
Q 004198 647 NVHLIRGNHEAA 658 (769)
Q Consensus 647 ~v~llrGNHE~~ 658 (769)
-+++|-||||..
T Consensus 75 ~t~fi~GNHE~~ 86 (262)
T cd00844 75 LTIFIGGNHEAS 86 (262)
T ss_pred eEEEECCCCCCH
Confidence 689999999964
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s |
| >cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.01 Score=60.48 Aligned_cols=68 Identities=24% Similarity=0.234 Sum_probs=38.9
Q ss_pred EEEEccCCCCH----HHHHH----HHHHhCCCCCCCCCcceeEEEeccccCCCCChHH---HHHHHHHhhhcCCCceEEe
Q 004198 583 VKVFGDLHGQF----GDLMR----LFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLE---TITLLLALKIEYPENVHLI 651 (769)
Q Consensus 583 i~viGDiHG~~----~~l~~----~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e---~l~ll~~lk~~~p~~v~ll 651 (769)
++++||+|-.. ..+.+ +.+.......+ -+|++||++|.+....+ ...++..|+ +.+-.++++
T Consensus 3 ~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d------~iv~~GDl~~~~~~~~~~~~~~~~~~~l~-~~~~p~~~~ 75 (214)
T cd07399 3 LAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIA------FVLHLGDIVDDGDNDAEWEAADKAFARLD-KAGIPYSVL 75 (214)
T ss_pred EEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCC------EEEECCCccCCCCCHHHHHHHHHHHHHHH-HcCCcEEEE
Confidence 78999999532 22222 33332211111 57889999999984332 222333332 123458899
Q ss_pred cCCcch
Q 004198 652 RGNHEA 657 (769)
Q Consensus 652 rGNHE~ 657 (769)
+||||.
T Consensus 76 ~GNHD~ 81 (214)
T cd07399 76 AGNHDL 81 (214)
T ss_pred CCCCcc
Confidence 999993
|
YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for |
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=96.52 E-value=1.8 Score=49.88 Aligned_cols=203 Identities=17% Similarity=0.202 Sum_probs=102.5
Q ss_pred CCcEEEEECCCCc--EEEecCCCCCCcccc--------------cceEEEE---CCEEEEECccCC-----------CCC
Q 004198 74 TNSVHLYDVLTRK--WTRIRPAGEPPSPRA--------------AHAAAAV---GTMVVFQGGIGP-----------AGH 123 (769)
Q Consensus 74 ~~dv~~yD~~~~~--W~~l~~~g~~P~~R~--------------~hs~~~~---~~~Iyv~GG~~~-----------~~~ 123 (769)
...+++||..+++ |+.-.....+-..+. -++..++ ++.||+..|-+. ...
T Consensus 174 ~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~ 253 (488)
T cd00216 174 RGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNL 253 (488)
T ss_pred CcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCC
Confidence 5689999999875 875432111101110 0112233 467777654320 123
Q ss_pred CcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEE-----ECCc--EEEEEecCCCCCccCceeEEeCCCCCceEEEc
Q 004198 124 STDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDL-----VSQR--YLVSVSGNDGKRVLSDAWALDTAQKPYVWQRL 196 (769)
Q Consensus 124 ~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~-----~~~~--~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v 196 (769)
..+.++.+|..+.+..|+.-......-.-+......+ +.+. .+++.|..+ ..++.+|.++....|+.-
T Consensus 254 ~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~-----G~l~ald~~tG~~~W~~~ 328 (488)
T cd00216 254 YTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKN-----GFFYVLDRTTGKLISARP 328 (488)
T ss_pred ceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCC-----ceEEEEECCCCcEeeEeE
Confidence 3467999999998889986421111000011111111 1121 244455433 349999999998889864
Q ss_pred CCCCCCCCcccccEEEEecCCEEEEEcccCC-----------CCCcccceEEEecCCCCceEEEeCCCCCC------Ccc
Q 004198 197 NPEGDRPSARMYATASARSDGMFLLCGGRDA-----------SGAPLADAYGLLMHRNGQWEWTLAPGVAP------SPR 259 (769)
Q Consensus 197 ~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~-----------~~~~l~d~~~ld~~~~~~W~W~~~~~~~P------~~R 259 (769)
.... ... ...+.+|+...... .......++.+|.. +++-.|....+... .+.
T Consensus 329 ~~~~---------~~~-~~~~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~-tG~~~W~~~~~~~~~~~~~g~~~ 397 (488)
T cd00216 329 EVEQ---------PMA-YDPGLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPK-TGKVVWEKREGTIRDSWNIGFPH 397 (488)
T ss_pred eecc---------ccc-cCCceEEEccccccccCcccccCCCCCCCceEEEEEeCC-CCcEeeEeeCCccccccccCCcc
Confidence 3210 001 11255665321110 01123457788875 45666766543110 122
Q ss_pred cceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCc--EEe
Q 004198 260 YQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGV--WLD 302 (769)
Q Consensus 260 ~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~--W~~ 302 (769)
.....++.++.+|+- .. ...+++||.++++ |+.
T Consensus 398 ~~~~~~~~g~~v~~g-~~---------dG~l~ald~~tG~~lW~~ 432 (488)
T cd00216 398 WGGSLATAGNLVFAG-AA---------DGYFRAFDATTGKELWKF 432 (488)
T ss_pred cCcceEecCCeEEEE-CC---------CCeEEEEECCCCceeeEE
Confidence 334455556655553 32 2348999998874 774
|
The alignment model contains an 8-bladed beta-propeller. |
| >cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.0083 Score=62.05 Aligned_cols=69 Identities=26% Similarity=0.305 Sum_probs=43.3
Q ss_pred CEEEEccCCCC------------HHHHHHHHHHhCCC--CCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCc
Q 004198 582 PVKVFGDLHGQ------------FGDLMRLFDEYGFP--STAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPEN 647 (769)
Q Consensus 582 ~i~viGDiHG~------------~~~l~~~l~~~~~~--~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~ 647 (769)
.+.+++|||=. ...|.++++.+... ..+ -+|++||+++.|.. +....+.++..+.+-.
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d------~vi~~GDl~~~~~~--~~~~~~~~~l~~~~~p 72 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPD------LVLVTGDLTDDGSP--ESYERLRELLAALPIP 72 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCC------EEEECccCCCCCCH--HHHHHHHHHHhhcCCC
Confidence 37899999944 34566777765432 222 58889999998753 2222222222222457
Q ss_pred eEEecCCcchh
Q 004198 648 VHLIRGNHEAA 658 (769)
Q Consensus 648 v~llrGNHE~~ 658 (769)
++.++||||..
T Consensus 73 ~~~v~GNHD~~ 83 (240)
T cd07402 73 VYLLPGNHDDR 83 (240)
T ss_pred EEEeCCCCCCH
Confidence 89999999974
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa |
| >PHA02546 47 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.0058 Score=66.84 Aligned_cols=72 Identities=22% Similarity=0.314 Sum_probs=44.0
Q ss_pred CEEEEccCC-C-----------CHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCC-CChHHHHHHHHH----hhhcC
Q 004198 582 PVKVFGDLH-G-----------QFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRG-QHSLETITLLLA----LKIEY 644 (769)
Q Consensus 582 ~i~viGDiH-G-----------~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG-~~s~e~l~ll~~----lk~~~ 644 (769)
+++.++|+| | +...|.++++.+.-...+ -+|+.||++|+. +.+.+++.++.. +....
T Consensus 2 KilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD------~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~ 75 (340)
T PHA02546 2 KILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGIT------TWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEA 75 (340)
T ss_pred eEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCC------EEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHC
Confidence 478899999 4 223444555444322222 688899999975 445555444432 11123
Q ss_pred CCceEEecCCcchhh
Q 004198 645 PENVHLIRGNHEAAD 659 (769)
Q Consensus 645 p~~v~llrGNHE~~~ 659 (769)
+-.+++|.||||...
T Consensus 76 gi~v~~I~GNHD~~~ 90 (340)
T PHA02546 76 GITLHVLVGNHDMYY 90 (340)
T ss_pred CCeEEEEccCCCccc
Confidence 457999999999743
|
|
| >COG0622 Predicted phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.0094 Score=58.18 Aligned_cols=63 Identities=16% Similarity=0.276 Sum_probs=41.9
Q ss_pred CEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchh
Q 004198 582 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAA 658 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~ 658 (769)
.|.|++|.|+...+..+..+.......+ -+|.+||++..... ..+.. ....+++.++||.|..
T Consensus 3 ~ilviSDtH~~~~~~~~~~~~~~~~~~d------~vih~GD~~~~~~~-----~~l~~---~~~~~i~~V~GN~D~~ 65 (172)
T COG0622 3 KILVISDTHGPLRAIEKALKIFNLEKVD------AVIHAGDSTSPFTL-----DALEG---GLAAKLIAVRGNCDGE 65 (172)
T ss_pred EEEEEeccCCChhhhhHHHHHhhhcCCC------EEEECCCcCCccch-----HHhhc---ccccceEEEEccCCCc
Confidence 4889999999997555555554433333 67779999975432 11111 0236899999999974
|
|
| >KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.0016 Score=71.36 Aligned_cols=118 Identities=14% Similarity=0.074 Sum_probs=99.4
Q ss_pred ccCHHHHHHHHHHHHHHHhcCCceeeecC----CEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCC
Q 004198 553 FLDSYEVGELCYAAEQIFMQEPTVLQLRA----PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQ 628 (769)
Q Consensus 553 ~~~~~~~~~l~~~~~~~~~~e~~~l~~~~----~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~ 628 (769)
.|...++..+++.+.+++..+|+...+.+ -.+.++|.||++.|+.++++.- |... .-|++=|++++++.
T Consensus 14 ~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d--P~~~-----K~Y~rrg~a~m~l~ 86 (476)
T KOG0376|consen 14 ALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD--PTYI-----KAYVRRGTAVMALG 86 (476)
T ss_pred hcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC--chhh-----heeeeccHHHHhHH
Confidence 46778888999999999999998877643 4789999999999999988764 2221 15999999999999
Q ss_pred ChHHHHHHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCC
Q 004198 629 HSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGEN 677 (769)
Q Consensus 629 ~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~ 677 (769)
..++.+..|...+...|+...+.|++||+..+-..++|..+....++..
T Consensus 87 ~~~~A~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~~d~ 135 (476)
T KOG0376|consen 87 EFKKALLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPEGDK 135 (476)
T ss_pred HHHHHHHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCccCC
Confidence 9999999999999999999999999999988888888877666666443
|
|
| >TIGR00619 sbcd exonuclease SbcD | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.0082 Score=62.79 Aligned_cols=71 Identities=23% Similarity=0.228 Sum_probs=45.0
Q ss_pred CEEEEccCCC-C-----------HHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHH----HHHHHhhhcCC
Q 004198 582 PVKVFGDLHG-Q-----------FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETI----TLLLALKIEYP 645 (769)
Q Consensus 582 ~i~viGDiHG-~-----------~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l----~ll~~lk~~~p 645 (769)
.++.++|+|- . ...|.++++.+.....+ -+|+.||++|+...+.+.. .+|..|+...|
T Consensus 2 kilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D------~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~ 75 (253)
T TIGR00619 2 RILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQID------ALLVAGDVFDTANPPAEAQELFNAFFRNLSDANP 75 (253)
T ss_pred EEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCC------EEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCC
Confidence 3788999993 2 23444555444222222 5888999999886555443 34445544333
Q ss_pred CceEEecCCcchh
Q 004198 646 ENVHLIRGNHEAA 658 (769)
Q Consensus 646 ~~v~llrGNHE~~ 658 (769)
-.++++.||||..
T Consensus 76 i~v~~i~GNHD~~ 88 (253)
T TIGR00619 76 IPIVVISGNHDSA 88 (253)
T ss_pred ceEEEEccCCCCh
Confidence 5799999999975
|
This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.012 Score=60.19 Aligned_cols=40 Identities=23% Similarity=0.234 Sum_probs=27.2
Q ss_pred eEEEeccccCCCCCh---HHHHHHHHHhhhcCCCceEEecCCcchhh
Q 004198 616 DYLFLGDYVDRGQHS---LETITLLLALKIEYPENVHLIRGNHEAAD 659 (769)
Q Consensus 616 ~~vfLGD~vDrG~~s---~e~l~ll~~lk~~~p~~v~llrGNHE~~~ 659 (769)
.+|++||+.+..... .++..++..+. ..+++++||||...
T Consensus 61 ~vIi~GDl~h~~~~~~~~~~~~~~l~~~~----~~v~~V~GNHD~~~ 103 (225)
T TIGR00024 61 ALIINGDLKHEFKKGLEWRFIREFIEVTF----RDLILIRGNHDALI 103 (225)
T ss_pred EEEEcCccccccCChHHHHHHHHHHHhcC----CcEEEECCCCCCcc
Confidence 799999999755442 23333443332 48999999999743
|
Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal. |
| >cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.0093 Score=60.75 Aligned_cols=74 Identities=22% Similarity=0.204 Sum_probs=45.4
Q ss_pred CEEEEccCC-CCH--------------HHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcC--
Q 004198 582 PVKVFGDLH-GQF--------------GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEY-- 644 (769)
Q Consensus 582 ~i~viGDiH-G~~--------------~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~-- 644 (769)
.|+.++|+| |.. ..|.++++.+.....+ .+|+.||++|....+.+.+..+...-.+.
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d------~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~ 74 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVD------FVLIAGDLFDSNNPSPEALELLIEALRRLKE 74 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCC------EEEECCcccCCCCCCHHHHHHHHHHHHHHHH
Confidence 378899999 321 2345555554332222 58889999998765554443332222121
Q ss_pred -CCceEEecCCcchhhhh
Q 004198 645 -PENVHLIRGNHEAADIN 661 (769)
Q Consensus 645 -p~~v~llrGNHE~~~~~ 661 (769)
.-.++++.||||.....
T Consensus 75 ~~~~v~~~~GNHD~~~~~ 92 (223)
T cd00840 75 AGIPVFIIAGNHDSPSRL 92 (223)
T ss_pred CCCCEEEecCCCCCcccc
Confidence 35799999999976643
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi |
| >cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.016 Score=60.32 Aligned_cols=73 Identities=18% Similarity=0.188 Sum_probs=38.9
Q ss_pred EEEccCC--CCH---HHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCC-----C-------h----HHHHHHHHHhhh
Q 004198 584 KVFGDLH--GQF---GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQ-----H-------S----LETITLLLALKI 642 (769)
Q Consensus 584 ~viGDiH--G~~---~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~-----~-------s----~e~l~ll~~lk~ 642 (769)
++++|+| +.. ..+..+++.+.-.... ......+|++||++|+.. . . .++..+|..|..
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~-~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~ 80 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDS-ASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPS 80 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCccc-ccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhccc
Confidence 6899999 432 2223444433211110 000116888999999731 0 1 123334444432
Q ss_pred cCCCceEEecCCcchhh
Q 004198 643 EYPENVHLIRGNHEAAD 659 (769)
Q Consensus 643 ~~p~~v~llrGNHE~~~ 659 (769)
.-.|+++.||||...
T Consensus 81 --~~~v~~ipGNHD~~~ 95 (243)
T cd07386 81 --HIKIIIIPGNHDAVR 95 (243)
T ss_pred --CCeEEEeCCCCCccc
Confidence 357999999999753
|
The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera |
| >cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.0074 Score=58.18 Aligned_cols=44 Identities=25% Similarity=0.297 Sum_probs=27.6
Q ss_pred eEEEeccccCCCCCh-HH----HHHHHHHhhhcC-CCceEEecCCcchhh
Q 004198 616 DYLFLGDYVDRGQHS-LE----TITLLLALKIEY-PENVHLIRGNHEAAD 659 (769)
Q Consensus 616 ~~vfLGD~vDrG~~s-~e----~l~ll~~lk~~~-p~~v~llrGNHE~~~ 659 (769)
.+|++||++|.+... .+ .+..+..+.... ...++++.||||...
T Consensus 41 ~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~~ 90 (156)
T cd08165 41 VVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIGF 90 (156)
T ss_pred EEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcCC
Confidence 689999999987642 12 222232222112 346999999999743
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to |
| >PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.013 Score=62.03 Aligned_cols=70 Identities=11% Similarity=0.079 Sum_probs=44.3
Q ss_pred CEEEEccCC-C-----------CHHHHHHHHHHhCCC-CCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCce
Q 004198 582 PVKVFGDLH-G-----------QFGDLMRLFDEYGFP-STAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENV 648 (769)
Q Consensus 582 ~i~viGDiH-G-----------~~~~l~~~l~~~~~~-~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v 648 (769)
.++.|+|+| . ....|.++++.+... +.-+ -+|+.||+++.|. .+-+..+++.-.+.+..+
T Consensus 16 ~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D-----~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv 88 (275)
T PRK11148 16 RILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFD-----LIVATGDLAQDHS--SEAYQHFAEGIAPLRKPC 88 (275)
T ss_pred EEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCC-----EEEECCCCCCCCC--HHHHHHHHHHHhhcCCcE
Confidence 388999999 1 135677777765322 1111 5788999999874 233333333222345679
Q ss_pred EEecCCcchh
Q 004198 649 HLIRGNHEAA 658 (769)
Q Consensus 649 ~llrGNHE~~ 658 (769)
+++.||||..
T Consensus 89 ~~v~GNHD~~ 98 (275)
T PRK11148 89 VWLPGNHDFQ 98 (275)
T ss_pred EEeCCCCCCh
Confidence 9999999973
|
|
| >COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.0032 Score=59.33 Aligned_cols=84 Identities=35% Similarity=0.590 Sum_probs=64.6
Q ss_pred hhhhccCCHHHHHHHhCCCCchhhhHH---HhHhhccccceEEEec-eEEEEcCCCCCCC-CChHHhhhccCCc--ccCC
Q 004198 659 DINALFGFRLECIERMGENDGIWAWTR---FNQLFNCLPLAALIEK-KIICMHGGIGRSI-HSVEQIEKLERPI--TMDA 731 (769)
Q Consensus 659 ~~~~~~g~~~e~~~~~~~~~~~~~~~~---~~~~f~~lP~~~~i~~-~i~~vHgGi~~~~-~~~~~i~~~~rp~--~~~~ 731 (769)
.+...+++.+++..++... ..|.+ ..++|+.||+.+++++ .++|.|+++++.+ ..+++++.+.|.. .+..
T Consensus 2 ~l~~~~~~~~~~~~~~~~~---~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 78 (155)
T COG0639 2 LLTALYGFYDEKLRKYGEE---LEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPH 78 (155)
T ss_pred hhhhhhchhHHhhhhcCCc---eeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCC
Confidence 3455677888877777543 34655 9999999999999988 9999999999976 7888888887766 4444
Q ss_pred CccceeceeccCCCC
Q 004198 732 GSIILMDLLWFVLNI 746 (769)
Q Consensus 732 ~~~~~~dllWsdp~~ 746 (769)
.+ ...+.+|++|..
T Consensus 79 ~g-~~~~~~~~~~~~ 92 (155)
T COG0639 79 AG-HTHDLLWSDPDG 92 (155)
T ss_pred cc-ccccccCCCCCC
Confidence 44 556669998875
|
|
| >PRK10966 exonuclease subunit SbcD; Provisional | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.016 Score=64.80 Aligned_cols=42 Identities=19% Similarity=0.338 Sum_probs=29.1
Q ss_pred eEEEeccccCCCCChHHHH----HHHHHhhhcCCCceEEecCCcchh
Q 004198 616 DYLFLGDYVDRGQHSLETI----TLLLALKIEYPENVHLIRGNHEAA 658 (769)
Q Consensus 616 ~~vfLGD~vDrG~~s~e~l----~ll~~lk~~~p~~v~llrGNHE~~ 658 (769)
-+|+.||++|++..+.+.. .++..|+. .+-.++++.||||..
T Consensus 42 ~viIaGDifD~~~p~~~a~~~~~~~l~~L~~-~~~~v~~I~GNHD~~ 87 (407)
T PRK10966 42 AIIVAGDIFDTGSPPSYARELYNRFVVNLQQ-TGCQLVVLAGNHDSV 87 (407)
T ss_pred EEEECCccccCCCCcHHHHHHHHHHHHHHHh-cCCcEEEEcCCCCCh
Confidence 6788999999986554432 33444442 234699999999964
|
|
| >cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.016 Score=56.91 Aligned_cols=43 Identities=26% Similarity=0.281 Sum_probs=26.9
Q ss_pred eEEEeccccCCCCCh--HHHHHHHHHhhhcCCCceEEecCCcchh
Q 004198 616 DYLFLGDYVDRGQHS--LETITLLLALKIEYPENVHLIRGNHEAA 658 (769)
Q Consensus 616 ~~vfLGD~vDrG~~s--~e~l~ll~~lk~~~p~~v~llrGNHE~~ 658 (769)
.+|++||++|..... .+...+-+.......-.+++++||||..
T Consensus 44 ~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 44 RLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred EEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccc
Confidence 799999999865432 2222211111223445899999999974
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro |
| >cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.019 Score=59.26 Aligned_cols=38 Identities=26% Similarity=0.273 Sum_probs=25.8
Q ss_pred eEEEeccccCCCCCh--HHHHHHHHHhhhcCCCceEEecCCcch
Q 004198 616 DYLFLGDYVDRGQHS--LETITLLLALKIEYPENVHLIRGNHEA 657 (769)
Q Consensus 616 ~~vfLGD~vDrG~~s--~e~l~ll~~lk~~~p~~v~llrGNHE~ 657 (769)
-+|+.||+++++... .+.+.+|.++ |..++++.||||.
T Consensus 44 ~viiaGDl~~~~~~~~~~~~l~~l~~l----~~~v~~V~GNHD~ 83 (232)
T cd07393 44 IVLIPGDISWAMKLEEAKLDLAWIDAL----PGTKVLLKGNHDY 83 (232)
T ss_pred EEEEcCCCccCCChHHHHHHHHHHHhC----CCCeEEEeCCccc
Confidence 577899999887532 2334444332 3358999999996
|
DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat |
| >cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.025 Score=56.76 Aligned_cols=41 Identities=17% Similarity=0.182 Sum_probs=29.3
Q ss_pred eEEEeccccCCCCC---hHHHHHHHHHhhhcCCCceEEecCCcc
Q 004198 616 DYLFLGDYVDRGQH---SLETITLLLALKIEYPENVHLIRGNHE 656 (769)
Q Consensus 616 ~~vfLGD~vDrG~~---s~e~l~ll~~lk~~~p~~v~llrGNHE 656 (769)
-+|++||+++.+.. +.+.+..++.......-.++++.||||
T Consensus 44 ~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~GNHD 87 (199)
T cd07383 44 LVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAATFGNHD 87 (199)
T ss_pred EEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEECccCC
Confidence 68899999997665 355565554443333457899999999
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP |
| >PF12768 Rax2: Cortical protein marker for cell polarity | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.72 Score=48.80 Aligned_cols=111 Identities=14% Similarity=0.205 Sum_probs=70.7
Q ss_pred CCcEEEEECCCCcEEEecCCCCCCccccc--ceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeec--CC
Q 004198 74 TNSVHLYDVLTRKWTRIRPAGEPPSPRAA--HAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQ--GQ 148 (769)
Q Consensus 74 ~~dv~~yD~~~~~W~~l~~~g~~P~~R~~--hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~--g~ 148 (769)
...+..||+.+.+|..+... ..+ .++... ++.||+.|-..-.+.....+-.||..+ .+|..+... ..
T Consensus 15 C~~lC~yd~~~~qW~~~g~~------i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~--~~w~~~~~~~s~~ 86 (281)
T PF12768_consen 15 CPGLCLYDTDNSQWSSPGNG------ISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKN--QTWSSLGGGSSNS 86 (281)
T ss_pred CCEEEEEECCCCEeecCCCC------ceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCC--CeeeecCCccccc
Confidence 57899999999999976532 222 233333 568888887654443456688999999 779998642 24
Q ss_pred CCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCC
Q 004198 149 GPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNP 198 (769)
Q Consensus 149 ~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~ 198 (769)
.|.+....+....+...+++.|.... -..-+..|| .. +|+.+..
T Consensus 87 ipgpv~a~~~~~~d~~~~~~aG~~~~--g~~~l~~~d--Gs--~W~~i~~ 130 (281)
T PF12768_consen 87 IPGPVTALTFISNDGSNFWVAGRSAN--GSTFLMKYD--GS--SWSSIGS 130 (281)
T ss_pred CCCcEEEEEeeccCCceEEEeceecC--CCceEEEEc--CC--ceEeccc
Confidence 56665444443335556777776521 223455564 34 7999876
|
|
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=95.55 E-value=4.1 Score=46.95 Aligned_cols=167 Identities=16% Similarity=0.185 Sum_probs=86.0
Q ss_pred CcEEEEECCCCc--EEEecCCC-CCCcc-cccceEEEEC-CEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCC
Q 004198 75 NSVHLYDVLTRK--WTRIRPAG-EPPSP-RAAHAAAAVG-TMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQG 149 (769)
Q Consensus 75 ~dv~~yD~~~~~--W~~l~~~g-~~P~~-R~~hs~~~~~-~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~ 149 (769)
..++.+|..+++ |+.-.... ....+ -.....+..+ +.||+... ...++.+|..+.+..|+.-......
T Consensus 71 g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~~~~~V~v~~~-------~g~v~AlD~~TG~~~W~~~~~~~~~ 143 (488)
T cd00216 71 SALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYWDPRKVFFGTF-------DGRLVALDAETGKQVWKFGNNDQVP 143 (488)
T ss_pred CcEEEEECCCChhhceeCCCCCccccccccccCCcEEccCCeEEEecC-------CCeEEEEECCCCCEeeeecCCCCcC
Confidence 468999998765 98643221 00111 1112234445 78887543 2469999999988889865311000
Q ss_pred CCCccccEEEEECCcEEEEEecCCCC----CccCceeEEeCCCCCceEEEcCCCCCCCCcc---------------cccE
Q 004198 150 PGPRYGHVMDLVSQRYLVSVSGNDGK----RVLSDAWALDTAQKPYVWQRLNPEGDRPSAR---------------MYAT 210 (769)
Q Consensus 150 p~~R~~hs~~~~~~~~l~v~GG~~~~----~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r---------------~~hs 210 (769)
+......+.++.+ ..+|+ |..+.. .....+++||.++....|+.-.........+ ...+
T Consensus 144 ~~~~i~ssP~v~~-~~v~v-g~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~ 221 (488)
T cd00216 144 PGYTMTGAPTIVK-KLVII-GSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSWAS 221 (488)
T ss_pred cceEecCCCEEEC-CEEEE-eccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCCccCC
Confidence 1111122333344 35554 432221 2346789999999888997644221110111 1112
Q ss_pred EEEe-cCCEEEEEcccCC-----------CCCcccceEEEecCCCCceEEEeC
Q 004198 211 ASAR-SDGMFLLCGGRDA-----------SGAPLADAYGLLMHRNGQWEWTLA 251 (769)
Q Consensus 211 a~~~-~~g~l~v~GG~~~-----------~~~~l~d~~~ld~~~~~~W~W~~~ 251 (769)
.++. .++.+|+..|... .....+.++.+|.. +++-.|...
T Consensus 222 pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~-tG~~~W~~~ 273 (488)
T cd00216 222 PTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDAD-TGKVKWFYQ 273 (488)
T ss_pred eeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCC-CCCEEEEee
Confidence 2222 3567777644221 11223568999986 566677654
|
The alignment model contains an 8-bladed beta-propeller. |
| >COG2908 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.066 Score=54.23 Aligned_cols=98 Identities=26% Similarity=0.360 Sum_probs=57.4
Q ss_pred EEccCCCC------HHHHHHHHHHhCCCCCCCCCcceeEEEeccccC--CCCC-----hHHHHHHHHHhhhcCCCceEEe
Q 004198 585 VFGDLHGQ------FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVD--RGQH-----SLETITLLLALKIEYPENVHLI 651 (769)
Q Consensus 585 viGDiHG~------~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vD--rG~~-----s~e~l~ll~~lk~~~p~~v~ll 651 (769)
+|+|+|=. -+-|+++++.... ..+ .+++|||++| .|.. --+|...|..+. +...+++.+
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~~~a~-~ad------~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a-~~G~~v~~i 73 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLREEAA-QAD------ALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLA-RKGTRVYYI 73 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHHhccc-cCc------EEEEechhhhhhhcCCcccHHHHHHHHHHHHHH-hcCCeEEEe
Confidence 68899854 3445566665432 222 6888999998 4443 234445554443 346799999
Q ss_pred cCCcchhhhhhccCCHHHHHHHhCCCCchhhhHHHhHhhccccceEEE---eceEEEEcCCC
Q 004198 652 RGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALI---EKKIICMHGGI 710 (769)
Q Consensus 652 rGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~f~~lP~~~~i---~~~i~~vHgGi 710 (769)
.||||. .+...+ ....+ .+.-+|-..++ +.+++++||-.
T Consensus 74 ~GN~Df-ll~~~f------~~~~g-------------~~~l~~~~~~~~l~g~~~Ll~HGD~ 115 (237)
T COG2908 74 HGNHDF-LLGKRF------AQEAG-------------GMTLLPDPIVLDLYGKRILLAHGDT 115 (237)
T ss_pred cCchHH-HHHHHH------HhhcC-------------ceEEcCcceeeeecCcEEEEEeCCc
Confidence 999994 332221 11121 12334544444 47999999965
|
|
| >cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.027 Score=57.23 Aligned_cols=42 Identities=31% Similarity=0.475 Sum_probs=26.4
Q ss_pred eEEEeccccCC--CC-----C-hHHHHHHHHHhhhcCCCceEEecCCcchh
Q 004198 616 DYLFLGDYVDR--GQ-----H-SLETITLLLALKIEYPENVHLIRGNHEAA 658 (769)
Q Consensus 616 ~~vfLGD~vDr--G~-----~-s~e~l~ll~~lk~~~p~~v~llrGNHE~~ 658 (769)
.+|++||++|. +. . ..+.+..++.+. .....++.+.||||..
T Consensus 33 ~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~~v~GNHD~~ 82 (217)
T cd07398 33 ALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLA-DRGTRVYYVPGNHDFL 82 (217)
T ss_pred EEEEeccEEEEEecCCCCCChHHHHHHHHHHHHH-HCCCeEEEECCCchHH
Confidence 78999999983 11 1 122223333332 2346899999999974
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l |
| >TIGR00583 mre11 DNA repair protein (mre11) | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.042 Score=61.15 Aligned_cols=72 Identities=18% Similarity=0.150 Sum_probs=51.0
Q ss_pred CEEEEccCCCC------------HHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhc------
Q 004198 582 PVKVFGDLHGQ------------FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIE------ 643 (769)
Q Consensus 582 ~i~viGDiHG~------------~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~------ 643 (769)
.|.+++|+|-- +..|.++++.+.....+ -+|+.||+.|+..-|.+++..++.+-.+
T Consensus 5 KIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD------~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~ 78 (405)
T TIGR00583 5 RILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVD------MILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDK 78 (405)
T ss_pred EEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCC------EEEECCccCCCCCCCHHHHHHHHHHHHHhhccCC
Confidence 38899999942 45667777766433322 5788999999999898888554443322
Q ss_pred ------------------------------CCCceEEecCCcchhh
Q 004198 644 ------------------------------YPENVHLIRGNHEAAD 659 (769)
Q Consensus 644 ------------------------------~p~~v~llrGNHE~~~ 659 (769)
..-.||+|-||||...
T Consensus 79 p~~~~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 79 PCELEFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPS 124 (405)
T ss_pred ccchhhccchhhhcccccccccccccccccCCCCEEEEcCCCCCcc
Confidence 1347999999999874
|
All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria. |
| >cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.039 Score=57.81 Aligned_cols=70 Identities=20% Similarity=0.076 Sum_probs=39.3
Q ss_pred EEEEccCCCCHH------HH-HHHHHHhCCCCCCCCCcceeEEEeccccCCCCC--------hH---HHHHHHHHhhhcC
Q 004198 583 VKVFGDLHGQFG------DL-MRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQH--------SL---ETITLLLALKIEY 644 (769)
Q Consensus 583 i~viGDiHG~~~------~l-~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~--------s~---e~l~ll~~lk~~~ 644 (769)
++.++|||-... .. ..+++.+.....+ -+|++||++|+... .. +.+..+..+....
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd------~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPA------LVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVIN 75 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCC------EEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCC
Confidence 567899996322 11 2233333221112 58889999997652 11 2223333322223
Q ss_pred CCceEEecCCcchh
Q 004198 645 PENVHLIRGNHEAA 658 (769)
Q Consensus 645 p~~v~llrGNHE~~ 658 (769)
+..++.++||||..
T Consensus 76 ~~p~~~v~GNHD~~ 89 (256)
T cd07401 76 KEKWFDIRGNHDLF 89 (256)
T ss_pred cceEEEeCCCCCcC
Confidence 56799999999985
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >COG1409 Icc Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.87 E-value=0.088 Score=55.90 Aligned_cols=73 Identities=26% Similarity=0.303 Sum_probs=49.6
Q ss_pred CEEEEccCCCC------HHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhh--hcCCCceEEecC
Q 004198 582 PVKVFGDLHGQ------FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALK--IEYPENVHLIRG 653 (769)
Q Consensus 582 ~i~viGDiHG~------~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk--~~~p~~v~llrG 653 (769)
.+..|+|+|-- ...+.++++.+.....+ -+|+.||+.++|. .+-...+..+- ...+..+++++|
T Consensus 2 ~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D------~~v~tGDl~~~~~--~~~~~~~~~~l~~~~~~~~~~~vpG 73 (301)
T COG1409 2 RIAHISDLHLGALGVDSEELLEALLAAIEQLKPD------LLVVTGDLTNDGE--PEEYRRLKELLARLELPAPVIVVPG 73 (301)
T ss_pred eEEEEecCcccccccchHHHHHHHHHHHhcCCCC------EEEEccCcCCCCC--HHHHHHHHHHHhhccCCCceEeeCC
Confidence 37889999977 34556666777644333 6889999999963 22233333332 366778999999
Q ss_pred Ccchhhhhh
Q 004198 654 NHEAADINA 662 (769)
Q Consensus 654 NHE~~~~~~ 662 (769)
|||....+.
T Consensus 74 NHD~~~~~~ 82 (301)
T COG1409 74 NHDARVVNG 82 (301)
T ss_pred CCcCCchHH
Confidence 999876554
|
|
| >TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family | Back alignment and domain information |
|---|
Probab=94.75 E-value=8.7 Score=44.73 Aligned_cols=114 Identities=19% Similarity=0.180 Sum_probs=64.5
Q ss_pred CcEEEEECCCCc--EEEecCCC-C-CC---cccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecC
Q 004198 75 NSVHLYDVLTRK--WTRIRPAG-E-PP---SPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQG 147 (769)
Q Consensus 75 ~dv~~yD~~~~~--W~~l~~~g-~-~P---~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g 147 (769)
+.++++|..+++ |+.-.... . .+ ......+.+..+++||+... ...++++|..+.+..|+.-. .
T Consensus 79 g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av~~~~v~v~t~-------dg~l~ALDa~TGk~~W~~~~--~ 149 (527)
T TIGR03075 79 SRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVALYDGKVFFGTL-------DARLVALDAKTGKVVWSKKN--G 149 (527)
T ss_pred CcEEEEECCCCceeeEecCCCCcccccccccccccccceEECCEEEEEcC-------CCEEEEEECCCCCEEeeccc--c
Confidence 469999998865 88543211 0 00 00112234556778887432 23599999999888898653 1
Q ss_pred CCCCC-ccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCC
Q 004198 148 QGPGP-RYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNP 198 (769)
Q Consensus 148 ~~p~~-R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~ 198 (769)
..... ....+.++.++ .+|+............+..||.++....|+.-..
T Consensus 150 ~~~~~~~~tssP~v~~g-~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~ 200 (527)
T TIGR03075 150 DYKAGYTITAAPLVVKG-KVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTV 200 (527)
T ss_pred cccccccccCCcEEECC-EEEEeecccccCCCcEEEEEECCCCceeEeccCc
Confidence 11111 11123334444 6655432222223457999999999888976543
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens. |
| >cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.068 Score=51.00 Aligned_cols=68 Identities=19% Similarity=0.309 Sum_probs=48.1
Q ss_pred EEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcc
Q 004198 584 KVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHE 656 (769)
Q Consensus 584 ~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE 656 (769)
.|+||+||+++.+.+-++.+.- +.+.. --+|++||+..-....-+ +.-++.=+.+.|--.+++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~--k~gpF--d~~ic~Gdff~~~~~~~~-~~~y~~g~~~~pipTyf~ggn~~ 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINK--KKGPF--DALLCVGDFFGDDEDDEE-LEAYKDGSKKVPIPTYFLGGNNP 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhc--ccCCe--eEEEEecCccCCccchhh-HHHHhcCCccCCCCEEEECCCCC
Confidence 4899999999999887777532 12221 157779999986555534 44444445567889999999998
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site |
| >cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.094 Score=55.07 Aligned_cols=71 Identities=13% Similarity=0.026 Sum_probs=40.8
Q ss_pred EEEEccCCCCH----------------HHHHHHHHHhCCC-CCCCCCcceeEEEeccccCCCCChH---HHHHHHHH-hh
Q 004198 583 VKVFGDLHGQF----------------GDLMRLFDEYGFP-STAGDITYIDYLFLGDYVDRGQHSL---ETITLLLA-LK 641 (769)
Q Consensus 583 i~viGDiHG~~----------------~~l~~~l~~~~~~-~~~~~~~~~~~vfLGD~vDrG~~s~---e~l~ll~~-lk 641 (769)
+++++|+|--. ..|.++++.+... +.- .-+|++||+++.|...- +....+.. ++
T Consensus 7 f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~p-----d~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~ 81 (262)
T cd07395 7 FIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKP-----KFVVVCGDLVNAMPGDELRERQVSDLKDVLS 81 (262)
T ss_pred EEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCC-----CEEEEeCCcCCCCcchhhHHHHHHHHHHHHh
Confidence 67888888653 1345555555321 111 05778999999887531 11222222 22
Q ss_pred h-cCCCceEEecCCcchh
Q 004198 642 I-EYPENVHLIRGNHEAA 658 (769)
Q Consensus 642 ~-~~p~~v~llrGNHE~~ 658 (769)
. ..+-.++.+.||||..
T Consensus 82 ~~~~~vp~~~i~GNHD~~ 99 (262)
T cd07395 82 LLDPDIPLVCVCGNHDVG 99 (262)
T ss_pred hccCCCcEEEeCCCCCCC
Confidence 1 1234699999999974
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th |
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.69 E-value=0.09 Score=52.21 Aligned_cols=66 Identities=20% Similarity=0.124 Sum_probs=39.4
Q ss_pred cCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHH-HHHHHHHhhhcC---------------------C
Q 004198 588 DLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLE-TITLLLALKIEY---------------------P 645 (769)
Q Consensus 588 DiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e-~l~ll~~lk~~~---------------------p 645 (769)
|++|+=.=|.+.++.+-....- ..++||||++|.|.-+-+ --.....++..+ .
T Consensus 24 d~~~~D~YL~~~~~~~~~~l~P-----d~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~ 98 (193)
T cd08164 24 DLFGNDYFLGHIVSMMQFWLKP-----DAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGK 98 (193)
T ss_pred hhhhhHHHHHHHHHHHHHhcCC-----CEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCC
Confidence 4456655666666655432211 168899999998864333 224444443332 1
Q ss_pred CceEEecCCcchh
Q 004198 646 ENVHLIRGNHEAA 658 (769)
Q Consensus 646 ~~v~llrGNHE~~ 658 (769)
-.+++|.||||--
T Consensus 99 i~~i~V~GNHDIG 111 (193)
T cd08164 99 TPLINIAGNHDVG 111 (193)
T ss_pred ceEEEECCcccCC
Confidence 4678999999973
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.59 E-value=0.071 Score=52.23 Aligned_cols=44 Identities=27% Similarity=0.321 Sum_probs=28.4
Q ss_pred eEEEeccccCCCCCh--HH---HHHHHHHhhhcC-----CCceEEecCCcchhh
Q 004198 616 DYLFLGDYVDRGQHS--LE---TITLLLALKIEY-----PENVHLIRGNHEAAD 659 (769)
Q Consensus 616 ~~vfLGD~vDrG~~s--~e---~l~ll~~lk~~~-----p~~v~llrGNHE~~~ 659 (769)
.+||+||++|.+... .+ .+..+..+.... .-.++++.||||...
T Consensus 48 ~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 48 VVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred EEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 689999999988743 22 333333322111 356999999999853
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit |
| >cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.54 E-value=0.045 Score=58.47 Aligned_cols=68 Identities=25% Similarity=0.207 Sum_probs=38.3
Q ss_pred CEEEEccCCCC----HHHHHHHHHHhCCCCCCCCCcceeEEEeccccCC-CCCh----HHHHHHHHHhhhcCCCceEEec
Q 004198 582 PVKVFGDLHGQ----FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDR-GQHS----LETITLLLALKIEYPENVHLIR 652 (769)
Q Consensus 582 ~i~viGDiHG~----~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDr-G~~s----~e~l~ll~~lk~~~p~~v~llr 652 (769)
.+.|+||.|.. ...+.++.+. ...+ + -+|++||+++- |..+ -+.+..+..+.... .++.++
T Consensus 6 ~f~v~gD~~~~~~~~~~~~~~l~~~-~~~~-d------~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~--P~~~~~ 75 (294)
T cd00839 6 KFAVFGDMGQNTNNSTNTLDHLEKE-LGNY-D------AILHVGDLAYADGYNNGSRWDTFMRQIEPLASYV--PYMVTP 75 (294)
T ss_pred EEEEEEECCCCCCCcHHHHHHHHhc-cCCc-c------EEEEcCchhhhcCCccchhHHHHHHHHHHHHhcC--CcEEcC
Confidence 48899999952 2333333332 1111 1 47789999964 4321 22333333333333 589999
Q ss_pred CCcchhh
Q 004198 653 GNHEAAD 659 (769)
Q Consensus 653 GNHE~~~ 659 (769)
||||...
T Consensus 76 GNHD~~~ 82 (294)
T cd00839 76 GNHEADY 82 (294)
T ss_pred ccccccc
Confidence 9999754
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver |
| >cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.52 E-value=0.041 Score=54.69 Aligned_cols=58 Identities=17% Similarity=0.245 Sum_probs=37.8
Q ss_pred eEEEeccccCCCCCh--HHHHHHHHHhhhcCC----CceEEecCCcchhhhhhccCCHHHHHHHhC
Q 004198 616 DYLFLGDYVDRGQHS--LETITLLLALKIEYP----ENVHLIRGNHEAADINALFGFRLECIERMG 675 (769)
Q Consensus 616 ~~vfLGD~vDrG~~s--~e~l~ll~~lk~~~p----~~v~llrGNHE~~~~~~~~g~~~e~~~~~~ 675 (769)
-++||||++|.|+.+ .|.+..+..++..++ -.++.|.||||--.-.. ....+...||.
T Consensus 45 ~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG~~~~--~~~~~~v~RF~ 108 (195)
T cd08166 45 IVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIGGEEE--DPIESKIRRFE 108 (195)
T ss_pred EEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcCCCCC--CcCHHHHHHHH
Confidence 588899999999853 346676666664332 47889999999642111 11245566663
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R |
| >COG1408 Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.01 E-value=0.12 Score=54.93 Aligned_cols=71 Identities=24% Similarity=0.225 Sum_probs=47.1
Q ss_pred CEEEEccCCCCHHH--HHHHHHHhCCCCCCCCCcceeEEEeccccCC-C-CChHHHHHHHHHhhhcCCCceEEecCCcch
Q 004198 582 PVKVFGDLHGQFGD--LMRLFDEYGFPSTAGDITYIDYLFLGDYVDR-G-QHSLETITLLLALKIEYPENVHLIRGNHEA 657 (769)
Q Consensus 582 ~i~viGDiHG~~~~--l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDr-G-~~s~e~l~ll~~lk~~~p~~v~llrGNHE~ 657 (769)
+|+.++|+|-.... ..+.+........+ -+++.|||+|+ . +..-.++..|..|+. |-.+|++.||||.
T Consensus 46 ~iv~lSDlH~~~~~~~~~~~~~~i~~~~~D------livltGD~~~~~~~~~~~~~~~~L~~L~~--~~gv~av~GNHd~ 117 (284)
T COG1408 46 KIVQLSDLHSLPFREEKLALLIAIANELPD------LIVLTGDYVDGDRPPGVAALALFLAKLKA--PLGVFAVLGNHDY 117 (284)
T ss_pred EEEEeehhhhchhhHHHHHHHHHHHhcCCC------EEEEEeeeecCCCCCCHHHHHHHHHhhhc--cCCEEEEeccccc
Confidence 58999999987655 22333332222112 68889999995 4 455555666776654 4579999999987
Q ss_pred hhh
Q 004198 658 ADI 660 (769)
Q Consensus 658 ~~~ 660 (769)
..-
T Consensus 118 ~~~ 120 (284)
T COG1408 118 GVD 120 (284)
T ss_pred ccc
Confidence 543
|
|
| >PF07893 DUF1668: Protein of unknown function (DUF1668); InterPro: IPR012871 The hypothetical proteins found in this family are expressed by Oryza sativa (Rice) and are of unknown function | Back alignment and domain information |
|---|
Probab=93.97 E-value=1.4 Score=48.22 Aligned_cols=123 Identities=15% Similarity=0.170 Sum_probs=72.9
Q ss_pred CCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcc----cceEE
Q 004198 162 SQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPL----ADAYG 237 (769)
Q Consensus 162 ~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l----~d~~~ 237 (769)
.+.+|+..+.. ....+||+++. .-. ..+.++.+...-.++.+ .+.||++.........- .....
T Consensus 75 ~gskIv~~d~~------~~t~vyDt~t~--av~---~~P~l~~pk~~pisv~V-G~~LY~m~~~~~~~~~~~~~~~~FE~ 142 (342)
T PF07893_consen 75 HGSKIVAVDQS------GRTLVYDTDTR--AVA---TGPRLHSPKRCPISVSV-GDKLYAMDRSPFPEPAGRPDFPCFEA 142 (342)
T ss_pred cCCeEEEEcCC------CCeEEEECCCC--eEe---ccCCCCCCCcceEEEEe-CCeEEEeeccCccccccCccceeEEE
Confidence 44577777543 34889999987 333 33233444554444444 55699998764332210 03333
Q ss_pred E--e-----cCCCCceEEEeCCCCCCCcccc-------eEEEEe-CCEEEE-EecccCCCCcccCCCcEEEEECCCCcEE
Q 004198 238 L--L-----MHRNGQWEWTLAPGVAPSPRYQ-------HAAVFV-GARLHV-TGGALRGGRAIEGEAAVAVLDTAAGVWL 301 (769)
Q Consensus 238 l--d-----~~~~~~W~W~~~~~~~P~~R~~-------hs~~~~-~~~i~V-~GG~~~~~~~~~~~~~v~~yd~~t~~W~ 301 (769)
+ + ......|.|..++. +|..+.. .+-+++ +.+|+| .-|.. ...+.||+++.+|+
T Consensus 143 l~~~~~~~~~~~~~~w~W~~LP~-PPf~~~~~~~~~~i~sYavv~g~~I~vS~~~~~---------~GTysfDt~~~~W~ 212 (342)
T PF07893_consen 143 LVYRPPPDDPSPEESWSWRSLPP-PPFVRDRRYSDYRITSYAVVDGRTIFVSVNGRR---------WGTYSFDTESHEWR 212 (342)
T ss_pred eccccccccccCCCcceEEcCCC-CCccccCCcccceEEEEEEecCCeEEEEecCCc---------eEEEEEEcCCccee
Confidence 3 3 13467899999876 3444332 344455 777887 33311 24899999999999
Q ss_pred eccCC
Q 004198 302 DRNGL 306 (769)
Q Consensus 302 ~~~~~ 306 (769)
++..-
T Consensus 213 ~~GdW 217 (342)
T PF07893_consen 213 KHGDW 217 (342)
T ss_pred eccce
Confidence 98654
|
|
| >PF07893 DUF1668: Protein of unknown function (DUF1668); InterPro: IPR012871 The hypothetical proteins found in this family are expressed by Oryza sativa (Rice) and are of unknown function | Back alignment and domain information |
|---|
Probab=93.54 E-value=2.2 Score=46.76 Aligned_cols=121 Identities=17% Similarity=0.250 Sum_probs=73.9
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCC
Q 004198 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHS 124 (769)
Q Consensus 45 ~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~ 124 (769)
+.+|+..+.. ..+.+||..+..-..++.. +.+...-.++.++++||+..........
T Consensus 76 gskIv~~d~~--------------------~~t~vyDt~t~av~~~P~l---~~pk~~pisv~VG~~LY~m~~~~~~~~~ 132 (342)
T PF07893_consen 76 GSKIVAVDQS--------------------GRTLVYDTDTRAVATGPRL---HSPKRCPISVSVGDKLYAMDRSPFPEPA 132 (342)
T ss_pred CCeEEEEcCC--------------------CCeEEEECCCCeEeccCCC---CCCCcceEEEEeCCeEEEeeccCccccc
Confidence 7788888663 2478899999988766543 3444455777789999999875322111
Q ss_pred ----cCcEEEE--E------ccCCcceEEEeeecCCCCCCccc-------cEEEEECCcEEEE-EecCCCCCccCceeEE
Q 004198 125 ----TDDLYVL--D------LTNDKFKWHRVVVQGQGPGPRYG-------HVMDLVSQRYLVS-VSGNDGKRVLSDAWAL 184 (769)
Q Consensus 125 ----~~dl~~~--d------~~t~~~~W~~~~~~g~~p~~R~~-------hs~~~~~~~~l~v-~GG~~~~~~~~dv~~~ 184 (769)
...++++ + .....|.|+.++. +|-.+.. .+.+++++..|+| .-|.. .-.+.|
T Consensus 133 ~~~~~~~FE~l~~~~~~~~~~~~~~w~W~~LP~---PPf~~~~~~~~~~i~sYavv~g~~I~vS~~~~~-----~GTysf 204 (342)
T PF07893_consen 133 GRPDFPCFEALVYRPPPDDPSPEESWSWRSLPP---PPFVRDRRYSDYRITSYAVVDGRTIFVSVNGRR-----WGTYSF 204 (342)
T ss_pred cCccceeEEEeccccccccccCCCcceEEcCCC---CCccccCCcccceEEEEEEecCCeEEEEecCCc-----eEEEEE
Confidence 0144455 3 1234589999853 3333322 2233334556666 22211 248999
Q ss_pred eCCCCCceEEEcCC
Q 004198 185 DTAQKPYVWQRLNP 198 (769)
Q Consensus 185 d~~~~~~~W~~v~~ 198 (769)
|+++. +|+++-.
T Consensus 205 Dt~~~--~W~~~Gd 216 (342)
T PF07893_consen 205 DTESH--EWRKHGD 216 (342)
T ss_pred EcCCc--ceeeccc
Confidence 99998 9999843
|
|
| >cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=93.46 E-value=0.14 Score=53.28 Aligned_cols=65 Identities=32% Similarity=0.337 Sum_probs=41.6
Q ss_pred EEEEccCCCCH---------HHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChH-----HHHHHHHHhhhcCCCce
Q 004198 583 VKVFGDLHGQF---------GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSL-----ETITLLLALKIEYPENV 648 (769)
Q Consensus 583 i~viGDiHG~~---------~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~-----e~l~ll~~lk~~~p~~v 648 (769)
|+.++|+||.+ ..|.++++.......+ .-+|..||+++..+.+. .++..|.++. -.
T Consensus 3 i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~-----~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~g-----~d 72 (252)
T cd00845 3 ILHTNDLHGHFEPAGGVGGAARLATLIKEERAENEN-----TLLLDAGDNFDGSPPSTATKGEANIELMNALG-----YD 72 (252)
T ss_pred EEEecccccCccccCCcCCHHHHHHHHHHHHhcCCC-----eEEEeCCccCCCccchhccCCcHHHHHHHhcC-----CC
Confidence 78899999887 5566666665432111 14566999999877643 4555554442 23
Q ss_pred EEecCCcch
Q 004198 649 HLIRGNHEA 657 (769)
Q Consensus 649 ~llrGNHE~ 657 (769)
++..||||.
T Consensus 73 ~~~~GNHe~ 81 (252)
T cd00845 73 AVTIGNHEF 81 (252)
T ss_pred EEeeccccc
Confidence 345699996
|
This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich |
| >COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.97 E-value=0.4 Score=45.06 Aligned_cols=40 Identities=25% Similarity=0.341 Sum_probs=28.7
Q ss_pred eEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhh
Q 004198 616 DYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAAD 659 (769)
Q Consensus 616 ~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~ 659 (769)
.+.+|||+.-.-..--+...++..| |+++++++||||-.-
T Consensus 48 ~lwhLGDl~~~~n~~~~a~~IlerL----nGrkhlv~GNhDk~~ 87 (186)
T COG4186 48 VLWHLGDLSSGANRERAAGLILERL----NGRKHLVPGNHDKCH 87 (186)
T ss_pred eEEEecccccccchhhHHHHHHHHc----CCcEEEeeCCCCCCc
Confidence 6788999987554444545555444 589999999999644
|
|
| >PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A | Back alignment and domain information |
|---|
Probab=92.90 E-value=0.14 Score=51.44 Aligned_cols=73 Identities=21% Similarity=0.280 Sum_probs=42.5
Q ss_pred CCEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHH-------------------------H
Q 004198 581 APVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETI-------------------------T 635 (769)
Q Consensus 581 ~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l-------------------------~ 635 (769)
..|..++|.||+++.|.++.+.+.-...+ -++|+||++-....+-|-. .
T Consensus 6 ~kilA~s~~~g~~e~l~~l~~~~~e~~~D------~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~ 79 (255)
T PF14582_consen 6 RKILAISNFRGDFELLERLVEVIPEKGPD------AVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALD 79 (255)
T ss_dssp -EEEEEE--TT-HHHHHHHHHHHHHHT-S------EEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHH
T ss_pred hhheeecCcchHHHHHHHHHhhccccCCC------EEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHH
Confidence 35899999999999999988765322222 6899999997665444433 2
Q ss_pred HHHHhhhcCCCceEEecCCcchhh
Q 004198 636 LLLALKIEYPENVHLIRGNHEAAD 659 (769)
Q Consensus 636 ll~~lk~~~p~~v~llrGNHE~~~ 659 (769)
-++..--..+--+++|+||||...
T Consensus 80 ~ff~~L~~~~~p~~~vPG~~Dap~ 103 (255)
T PF14582_consen 80 KFFRILGELGVPVFVVPGNMDAPE 103 (255)
T ss_dssp HHHHHHHCC-SEEEEE--TTS-SH
T ss_pred HHHHHHHhcCCcEEEecCCCCchH
Confidence 333333345568999999999843
|
|
| >COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.60 E-value=0.39 Score=48.31 Aligned_cols=72 Identities=22% Similarity=0.256 Sum_probs=50.3
Q ss_pred CEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEecccc--CCCCChHHHHH-HHHHhhhcCCCceEEecCCcchh
Q 004198 582 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYV--DRGQHSLETIT-LLLALKIEYPENVHLIRGNHEAA 658 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~v--DrG~~s~e~l~-ll~~lk~~~p~~v~llrGNHE~~ 658 (769)
.+..+.|+||.+..+.++++.......+ -+++.||+. ++|+.-.-... .+..++. ....++.+.||-|..
T Consensus 5 kil~vtDlHg~~~~~~k~~~~~~~~~~D------~lviaGDlt~~~~~~~~~~~~~~~~e~l~~-~~~~v~avpGNcD~~ 77 (226)
T COG2129 5 KILAVTDLHGSEDSLKKLLNAAADIRAD------LLVIAGDLTYFHFGPKEVAEELNKLEALKE-LGIPVLAVPGNCDPP 77 (226)
T ss_pred eEEEEeccccchHHHHHHHHHHhhccCC------EEEEecceehhhcCchHHHHhhhHHHHHHh-cCCeEEEEcCCCChH
Confidence 5889999999999999998887643332 567799999 87764322221 1334432 336899999999876
Q ss_pred hh
Q 004198 659 DI 660 (769)
Q Consensus 659 ~~ 660 (769)
.+
T Consensus 78 ~v 79 (226)
T COG2129 78 EV 79 (226)
T ss_pred HH
Confidence 54
|
|
| >cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=92.39 E-value=0.44 Score=49.92 Aligned_cols=42 Identities=26% Similarity=0.447 Sum_probs=25.3
Q ss_pred eEEEeccccCCCCChH-----HHHHHHHHhhhcCC--CceEEecCCcch
Q 004198 616 DYLFLGDYVDRGQHSL-----ETITLLLALKIEYP--ENVHLIRGNHEA 657 (769)
Q Consensus 616 ~~vfLGD~vDrG~~s~-----e~l~ll~~lk~~~p--~~v~llrGNHE~ 657 (769)
-+||+||++|.|.... +-+..+..+-...+ ..++.|.||||.
T Consensus 48 ~vv~lGDL~d~G~~~~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDi 96 (257)
T cd08163 48 STIFLGDLFDGGRDWADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDI 96 (257)
T ss_pred EEEEecccccCCeeCcHHHHHHHHHHHHHHhcCCCccceEEEeCCCccc
Confidence 5788999999997532 11222222110111 358999999996
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site |
| >COG1520 FOG: WD40-like repeat [Function unknown] | Back alignment and domain information |
|---|
Probab=91.87 E-value=23 Score=39.01 Aligned_cols=195 Identities=18% Similarity=0.281 Sum_probs=103.2
Q ss_pred CCcEEEEECCCCc--EEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCC
Q 004198 74 TNSVHLYDVLTRK--WTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPG 151 (769)
Q Consensus 74 ~~dv~~yD~~~~~--W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~ 151 (769)
.+.++.+|+.+.+ |....... .....-....-+++||+....+ .+|+||..+.+..|..-... .
T Consensus 77 ~G~i~A~d~~~g~~~W~~~~~~~---~~~~~~~~~~~~G~i~~g~~~g-------~~y~ld~~~G~~~W~~~~~~---~- 142 (370)
T COG1520 77 DGNIFALNPDTGLVKWSYPLLGA---VAQLSGPILGSDGKIYVGSWDG-------KLYALDASTGTLVWSRNVGG---S- 142 (370)
T ss_pred CCcEEEEeCCCCcEEecccCcCc---ceeccCceEEeCCeEEEecccc-------eEEEEECCCCcEEEEEecCC---C-
Confidence 3479999999886 97543310 0111111222267777755432 79999998877889887532 1
Q ss_pred CccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCc
Q 004198 152 PRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAP 231 (769)
Q Consensus 152 ~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~ 231 (769)
++..-.. +..+..+|+.. ..+.++++|..+....|..-...+ . ..+.. ......++.+|+...- .
T Consensus 143 ~~~~~~~-v~~~~~v~~~s------~~g~~~al~~~tG~~~W~~~~~~~-~-~~~~~-~~~~~~~~~vy~~~~~-----~ 207 (370)
T COG1520 143 PYYASPP-VVGDGTVYVGT------DDGHLYALNADTGTLKWTYETPAP-L-SLSIY-GSPAIASGTVYVGSDG-----Y 207 (370)
T ss_pred eEEecCc-EEcCcEEEEec------CCCeEEEEEccCCcEEEEEecCCc-c-ccccc-cCceeecceEEEecCC-----C
Confidence 3333333 44443544432 235689999998888998654432 1 12222 2222567777774321 1
Q ss_pred ccceEEEecCCCCceEEEeC----CCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCC--cEEeccC
Q 004198 232 LADAYGLLMHRNGQWEWTLA----PGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAG--VWLDRNG 305 (769)
Q Consensus 232 l~d~~~ld~~~~~~W~W~~~----~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~--~W~~~~~ 305 (769)
...++.++.. ++.-.|... .+..... -...+..+.+++-||..... ....+.++|..+. .|+.-..
T Consensus 208 ~~~~~a~~~~-~G~~~w~~~~~~~~~~~~~~---~~~~~~~~~v~v~~~~~~~~----~~g~~~~l~~~~G~~~W~~~~~ 279 (370)
T COG1520 208 DGILYALNAE-DGTLKWSQKVSQTIGRTAIS---TTPAVDGGPVYVDGGVYAGS----YGGKLLCLDADTGELIWSFPAG 279 (370)
T ss_pred cceEEEEEcc-CCcEeeeeeeecccCccccc---ccccccCceEEECCcEEEEe----cCCeEEEEEcCCCceEEEEecc
Confidence 1268888885 455566642 2211110 01223344444444421000 1234788887665 5887654
|
|
| >PF12768 Rax2: Cortical protein marker for cell polarity | Back alignment and domain information |
|---|
Probab=90.55 E-value=3.8 Score=43.44 Aligned_cols=126 Identities=17% Similarity=0.173 Sum_probs=72.1
Q ss_pred EEEECccCCCC-CCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCC-ccCceeEEeCCCC
Q 004198 112 VVFQGGIGPAG-HSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKR-VLSDAWALDTAQK 189 (769)
Q Consensus 112 Iyv~GG~~~~~-~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~-~~~dv~~~d~~~~ 189 (769)
|||.|-....+ ..-..+-.||..+ .+|..+- ..-.. .-.++....+..+|+.|-..... ....+-.||.++.
T Consensus 1 v~VGG~F~~aGsL~C~~lC~yd~~~--~qW~~~g---~~i~G-~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~ 74 (281)
T PF12768_consen 1 VYVGGSFTSAGSLPCPGLCLYDTDN--SQWSSPG---NGISG-TVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQ 74 (281)
T ss_pred CEEeeecCCCCCcCCCEEEEEECCC--CEeecCC---CCceE-EEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCC
Confidence 34544444333 3567788999999 7899983 33111 22344344566888877554433 4556888999999
Q ss_pred CceEEEcCCC--CCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCC
Q 004198 190 PYVWQRLNPE--GDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPG 253 (769)
Q Consensus 190 ~~~W~~v~~~--~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~ 253 (769)
+|+.+... ...|.+-..-.........+++.|.. ..+ ..-+..||-. +|..+..
T Consensus 75 --~w~~~~~~~s~~ipgpv~a~~~~~~d~~~~~~aG~~-~~g--~~~l~~~dGs-----~W~~i~~ 130 (281)
T PF12768_consen 75 --TWSSLGGGSSNSIPGPVTALTFISNDGSNFWVAGRS-ANG--STFLMKYDGS-----SWSSIGS 130 (281)
T ss_pred --eeeecCCcccccCCCcEEEEEeeccCCceEEEecee-cCC--CceEEEEcCC-----ceEeccc
Confidence 99888763 24454422111111233367777765 322 2446666544 6766654
|
|
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=89.99 E-value=0.47 Score=53.54 Aligned_cols=69 Identities=17% Similarity=0.079 Sum_probs=37.8
Q ss_pred CEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCCh---HHHHHHHHHhhhcCCCceEEecCCcchh
Q 004198 582 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHS---LETITLLLALKIEYPENVHLIRGNHEAA 658 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s---~e~l~ll~~lk~~~p~~v~llrGNHE~~ 658 (769)
.+.++||+|-. ......++.+.....+ -+|++||+++-+... -+...++..+.... -++.+.||||..
T Consensus 141 ~f~v~GDlG~~-~~~~~tl~~i~~~~pD------~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~--P~m~~~GNHE~~ 211 (427)
T PLN02533 141 KFAVSGDLGTS-EWTKSTLEHVSKWDYD------VFILPGDLSYANFYQPLWDTFGRLVQPLASQR--PWMVTHGNHELE 211 (427)
T ss_pred EEEEEEeCCCC-cccHHHHHHHHhcCCC------EEEEcCccccccchHHHHHHHHHHhhhHhhcC--ceEEeCcccccc
Confidence 48899999632 2222333333221111 477899999754332 11223333333233 478999999975
Q ss_pred h
Q 004198 659 D 659 (769)
Q Consensus 659 ~ 659 (769)
.
T Consensus 212 ~ 212 (427)
T PLN02533 212 K 212 (427)
T ss_pred c
Confidence 3
|
|
| >cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=89.97 E-value=0.48 Score=50.19 Aligned_cols=63 Identities=24% Similarity=0.277 Sum_probs=37.4
Q ss_pred EEEEccCCCCH----------------HHHHHHHHHhCCCCCCCCCcceeEEE--eccccCCCCCh-----------HHH
Q 004198 583 VKVFGDLHGQF----------------GDLMRLFDEYGFPSTAGDITYIDYLF--LGDYVDRGQHS-----------LET 633 (769)
Q Consensus 583 i~viGDiHG~~----------------~~l~~~l~~~~~~~~~~~~~~~~~vf--LGD~vDrG~~s-----------~e~ 633 (769)
|+.++|+||.+ ..|..+++....... +.|+ .||+++..+.+ ..+
T Consensus 3 il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~-------~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~ 75 (277)
T cd07410 3 ILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENP-------NTLLIDNGDTIQGSPLADYYAKIEDGDPHPM 75 (277)
T ss_pred EEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCC-------CeEEEeCCccCCccHHHHHhhhcccCCCChH
Confidence 77889999997 334555655532211 3344 69999865522 234
Q ss_pred HHHHHHhhhcCCCceEEecCCcch
Q 004198 634 ITLLLALKIEYPENVHLIRGNHEA 657 (769)
Q Consensus 634 l~ll~~lk~~~p~~v~llrGNHE~ 657 (769)
+..|..+. --++..||||.
T Consensus 76 ~~~ln~~g-----~d~~~lGNHe~ 94 (277)
T cd07410 76 IAAMNALG-----YDAGTLGNHEF 94 (277)
T ss_pred HHHHHhcC-----CCEEeecccCc
Confidence 55555442 22555699995
|
CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos |
| >PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate [] | Back alignment and domain information |
|---|
Probab=89.56 E-value=0.37 Score=55.25 Aligned_cols=41 Identities=24% Similarity=0.409 Sum_probs=36.1
Q ss_pred eEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhh
Q 004198 616 DYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADIN 661 (769)
Q Consensus 616 ~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~ 661 (769)
++-.+||+.||||.+-.+++.|+.. .+|-+-.||||-.++-
T Consensus 187 hLHIvGDIyDRGp~pd~ImD~Lm~~-----hsvDIQWGNHDIlWMG 227 (640)
T PF06874_consen 187 HLHIVGDIYDRGPRPDKIMDRLMNY-----HSVDIQWGNHDILWMG 227 (640)
T ss_pred heeecccccCCCCChhHHHHHHhcC-----CCccccccchHHHHHH
Confidence 6788999999999999999999975 4899999999976654
|
This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis |
| >COG1407 Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.32 E-value=1.5 Score=44.77 Aligned_cols=70 Identities=24% Similarity=0.336 Sum_probs=43.4
Q ss_pred cCCEEEEccCCCCHHHHH----------------HHHHHh--CCCCCCCCCcceeEEEeccccCCCCC-----hHHHHHH
Q 004198 580 RAPVKVFGDLHGQFGDLM----------------RLFDEY--GFPSTAGDITYIDYLFLGDYVDRGQH-----SLETITL 636 (769)
Q Consensus 580 ~~~i~viGDiHG~~~~l~----------------~~l~~~--~~~~~~~~~~~~~~vfLGD~vDrG~~-----s~e~l~l 636 (769)
.....|+.|+|=-|+.-+ +.+..+ .+.++ ++|++||+-.-.+. ..|+..+
T Consensus 19 ~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~-------~lIilGD~KH~~~~~~~~e~~~~~~f 91 (235)
T COG1407 19 LGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPK-------RLIILGDLKHEFGKSLRQEKEEVREF 91 (235)
T ss_pred cCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCC-------EEEEcCccccccCccccccHHHHHHH
Confidence 467999999996555443 222211 11121 79999999974332 3455555
Q ss_pred HHHhhhcCCCceEEecCCcchhh
Q 004198 637 LLALKIEYPENVHLIRGNHEAAD 659 (769)
Q Consensus 637 l~~lk~~~p~~v~llrGNHE~~~ 659 (769)
+..++.. .++++|||||...
T Consensus 92 ~~~~~~~---evi~i~GNHD~~i 111 (235)
T COG1407 92 LELLDER---EVIIIRGNHDNGI 111 (235)
T ss_pred HHHhccC---cEEEEeccCCCcc
Confidence 5444432 5999999999743
|
|
| >KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.66 E-value=0.042 Score=58.83 Aligned_cols=103 Identities=6% Similarity=-0.158 Sum_probs=84.3
Q ss_pred ceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCCCchhhhHHHhHhhccc
Q 004198 614 YIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCL 693 (769)
Q Consensus 614 ~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~f~~l 693 (769)
+...|+|+++++++.+.++.+.+.+..++.+-.+.-..++||+. .++++++.+......+...+|...++.++.+
T Consensus 48 ~latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~-----~~~~R~~LVlp~l~S~riyvid~~~ep~~~~ 122 (476)
T KOG0918|consen 48 YLATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGD-----SSFKRRYLVLPSLNSGRIYVIDVKTEPRKPS 122 (476)
T ss_pred ceeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccC-----cchhhhheeecccccCceEEEEeccCcCccc
Confidence 34789999999999999999999999999988899999999954 4556666666666666777888889999888
Q ss_pred cceEEEeceEEEEcCCCCCCCCChHHhhh
Q 004198 694 PLAALIEKKIICMHGGIGRSIHSVEQIEK 722 (769)
Q Consensus 694 P~~~~i~~~i~~vHgGi~~~~~~~~~i~~ 722 (769)
+...+.. +++|.||+..|...+...+.+
T Consensus 123 l~k~i~~-~il~~~~l~~Pht~hcla~g~ 150 (476)
T KOG0918|consen 123 LEKTIDP-DILEKTGLACPHTSHCLASGN 150 (476)
T ss_pred eeeeech-hhHhhcCCcCCcccccccCCC
Confidence 8887776 899999999998766655543
|
|
| >COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=87.39 E-value=1.5 Score=48.92 Aligned_cols=44 Identities=27% Similarity=0.342 Sum_probs=32.4
Q ss_pred eEEEeccccCCCCChHHHHHHHHHhhhcC---CCceEEecCCcchhh
Q 004198 616 DYLFLGDYVDRGQHSLETITLLLALKIEY---PENVHLIRGNHEAAD 659 (769)
Q Consensus 616 ~~vfLGD~vDrG~~s~e~l~ll~~lk~~~---p~~v~llrGNHE~~~ 659 (769)
-+|+-||+.|+..-|.+++.++...-.+. .-.|++|.||||...
T Consensus 43 ~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~I~GNHD~~~ 89 (390)
T COG0420 43 FVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVVIAGNHDSPS 89 (390)
T ss_pred EEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEEecCCCCchh
Confidence 47889999999988888776554333222 237999999999754
|
|
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=86.69 E-value=19 Score=39.75 Aligned_cols=225 Identities=12% Similarity=0.039 Sum_probs=104.9
Q ss_pred CCcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEE-CccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 74 TNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQ-GGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 74 ~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~-GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
...+|.+|+.+.+=++|+... .....+-..+.-++.+|++ .+ ..|+.+|+.+. +=+.+- ..|..
T Consensus 59 ~~nly~lDL~t~~i~QLTdg~--g~~~~g~~~s~~~~~~~Yv~~~--------~~l~~vdL~T~--e~~~vy---~~p~~ 123 (386)
T PF14583_consen 59 NRNLYLLDLATGEITQLTDGP--GDNTFGGFLSPDDRALYYVKNG--------RSLRRVDLDTL--EERVVY---EVPDD 123 (386)
T ss_dssp S-EEEEEETTT-EEEE---SS---B-TTT-EE-TTSSEEEEEETT--------TEEEEEETTT----EEEEE---E--TT
T ss_pred CcceEEEEcccCEEEECccCC--CCCccceEEecCCCeEEEEECC--------CeEEEEECCcC--cEEEEE---ECCcc
Confidence 367999999999999998641 1222222222224566554 33 46899999883 333332 23333
Q ss_pred ccccEEEE-ECCcEEEEEecC----CC--------------CCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEE
Q 004198 153 RYGHVMDL-VSQRYLVSVSGN----DG--------------KRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASA 213 (769)
Q Consensus 153 R~~hs~~~-~~~~~l~v~GG~----~~--------------~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~ 213 (769)
-.+....+ -.+...++ |=. +. ....+.+...|+.++ +.+.+-.. ..-.+|.-..
T Consensus 124 ~~g~gt~v~n~d~t~~~-g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG--~~~~v~~~----~~wlgH~~fs 196 (386)
T PF14583_consen 124 WKGYGTWVANSDCTKLV-GIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTG--ERKVVFED----TDWLGHVQFS 196 (386)
T ss_dssp EEEEEEEEE-TTSSEEE-EEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT----EEEEEEE----SS-EEEEEEE
T ss_pred cccccceeeCCCccEEE-EEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCC--ceeEEEec----CccccCcccC
Confidence 33322222 22222222 211 00 123456777888887 66666433 2233466555
Q ss_pred ecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEE
Q 004198 214 RSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVL 293 (769)
Q Consensus 214 ~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~y 293 (769)
-.+..+++|+-.......-.-+|..+.+....| ++....+.-..+|---..++..+.+=+...++. .-.+..|
T Consensus 197 P~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~---~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~----~~~i~~~ 269 (386)
T PF14583_consen 197 PTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVK---KVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQ----DFWIAGY 269 (386)
T ss_dssp TTEEEEEEEEE-S-TTTSS-SEEEEETTS---E---ESS---TTEEEEEEEE-TTSS-EEEEEEETTT------EEEEEE
T ss_pred CCCCCEEEEeccCCcceeceEEEEEEcCCCcce---eeecCCCCcccccccccCCCCEEEEEeecCCCC----ceEEEee
Confidence 566677777544333333457899997765332 233223455566666555554443323322221 2347889
Q ss_pred ECCCCcEEeccCCccCCCCCCCCCCCCCccCcccccceEEEEeCCEEEEEcCcC
Q 004198 294 DTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLK 347 (769)
Q Consensus 294 d~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~~~~iyv~GG~~ 347 (769)
|+++.+=+.+..+ +++.|-....+++|+|-=|.+
T Consensus 270 d~~t~~~~~~~~~--------------------p~~~H~~ss~Dg~L~vGDG~d 303 (386)
T PF14583_consen 270 DPDTGERRRLMEM--------------------PWCSHFMSSPDGKLFVGDGGD 303 (386)
T ss_dssp -TTT--EEEEEEE---------------------SEEEEEE-TTSSEEEEEE--
T ss_pred CCCCCCceEEEeC--------------------CceeeeEEcCCCCEEEecCCC
Confidence 9988754444333 678888888899998876654
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=84.73 E-value=52 Score=34.03 Aligned_cols=121 Identities=20% Similarity=0.299 Sum_probs=59.5
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEE-E-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAA-V-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~-~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
+.+++||+.+++-...-..+. .++ +++. - +..+|+.++. .+.+++||..+ .+...... ....+
T Consensus 11 ~~v~~~d~~t~~~~~~~~~~~--~~~---~l~~~~dg~~l~~~~~~------~~~v~~~d~~~--~~~~~~~~--~~~~~ 75 (300)
T TIGR03866 11 NTISVIDTATLEVTRTFPVGQ--RPR---GITLSKDGKLLYVCASD------SDTIQVIDLAT--GEVIGTLP--SGPDP 75 (300)
T ss_pred CEEEEEECCCCceEEEEECCC--CCC---ceEECCCCCEEEEEECC------CCeEEEEECCC--CcEEEecc--CCCCc
Confidence 578889998876443322211 122 2222 2 3467776642 34589999987 33433211 11111
Q ss_pred ccccEEEEE-CCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEccc
Q 004198 153 RYGHVMDLV-SQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGR 225 (769)
Q Consensus 153 R~~hs~~~~-~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~ 225 (769)
..++.. .++.+|+.++.+ +.+.+||+.+.. .-..+.. ....+.+....++.+++++..
T Consensus 76 ---~~~~~~~~g~~l~~~~~~~-----~~l~~~d~~~~~-~~~~~~~------~~~~~~~~~~~dg~~l~~~~~ 134 (300)
T TIGR03866 76 ---ELFALHPNGKILYIANEDD-----NLVTVIDIETRK-VLAEIPV------GVEPEGMAVSPDGKIVVNTSE 134 (300)
T ss_pred ---cEEEECCCCCEEEEEcCCC-----CeEEEEECCCCe-EEeEeeC------CCCcceEEECCCCCEEEEEec
Confidence 223233 334566654432 358889987751 1111211 111234445567777776643
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=84.48 E-value=1.8 Score=45.24 Aligned_cols=64 Identities=22% Similarity=0.210 Sum_probs=38.3
Q ss_pred EEEEccCCCCH----------HHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCCh-----HHHHHHHHHhhhcCCCc
Q 004198 583 VKVFGDLHGQF----------GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHS-----LETITLLLALKIEYPEN 647 (769)
Q Consensus 583 i~viGDiHG~~----------~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s-----~e~l~ll~~lk~~~p~~ 647 (769)
|+.+.|+||++ ..+..+++.....+. .-+|..||+++..+.+ ..++..+-.+. -.
T Consensus 3 il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~------~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~g----~d 72 (257)
T cd07408 3 ILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDN------DLLVDAGDAIQGLPISDLDKGETIIKIMNAVG----YD 72 (257)
T ss_pred EEEeccCcccccCCCCccccHHHHHHHHHHHHhcCC------EEEEeCCCcCCCchhhhhcCCcHHHHHHHhcC----Cc
Confidence 67889999985 345566666532211 1456699999876533 23334443332 23
Q ss_pred eEEecCCcch
Q 004198 648 VHLIRGNHEA 657 (769)
Q Consensus 648 v~llrGNHE~ 657 (769)
+ +..||||.
T Consensus 73 ~-~~~GNHef 81 (257)
T cd07408 73 A-VTPGNHEF 81 (257)
T ss_pred E-Eccccccc
Confidence 4 45699995
|
SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet |
| >cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=83.66 E-value=1.6 Score=46.48 Aligned_cols=65 Identities=26% Similarity=0.357 Sum_probs=40.2
Q ss_pred EEEEccCCCCHHH--------------HHHHHHHhCCCCCCCCCcceeEEEeccccCCCCC-h-----HHHHHHHHHhhh
Q 004198 583 VKVFGDLHGQFGD--------------LMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQH-S-----LETITLLLALKI 642 (769)
Q Consensus 583 i~viGDiHG~~~~--------------l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~-s-----~e~l~ll~~lk~ 642 (769)
|+.+.|+||++.. |..+++........ .-+|..||++...+. + ..++.++.++..
T Consensus 3 il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~-----~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~ 77 (288)
T cd07412 3 ILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPN-----SLFVSAGDLIGASPFESALLQDEPTIEALNAMGV 77 (288)
T ss_pred EEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCC-----eEEEeCCcccccccchhhcccCCcHHHHHHhhCC
Confidence 7788999998653 55566665432111 145669999986654 2 245566655532
Q ss_pred cCCCceEEecCCcch
Q 004198 643 EYPENVHLIRGNHEA 657 (769)
Q Consensus 643 ~~p~~v~llrGNHE~ 657 (769)
. .+..||||.
T Consensus 78 ----D-a~t~GNHef 87 (288)
T cd07412 78 ----D-ASAVGNHEF 87 (288)
T ss_pred ----e-eeeeccccc
Confidence 3 455699995
|
YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi |
| >cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=83.64 E-value=2.2 Score=44.98 Aligned_cols=68 Identities=22% Similarity=0.217 Sum_probs=37.3
Q ss_pred EEEEccCCCC--H--HHHHHHHHHhCC-CCCCCCCcceeEEEecccc-CCCCCh------HHHHHHHHH-hhhcCCCceE
Q 004198 583 VKVFGDLHGQ--F--GDLMRLFDEYGF-PSTAGDITYIDYLFLGDYV-DRGQHS------LETITLLLA-LKIEYPENVH 649 (769)
Q Consensus 583 i~viGDiHG~--~--~~l~~~l~~~~~-~~~~~~~~~~~~vfLGD~v-DrG~~s------~e~l~ll~~-lk~~~p~~v~ 649 (769)
+.++||.-.. . .++.+.+..... ...+ -+|++||+| +-|... .+.+..++. +. ..-.++
T Consensus 3 f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~d------fvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~--~~~P~~ 74 (277)
T cd07378 3 FLALGDWGGGGTAGQKAVAKAMAKVAAELGPD------FILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPS--LQVPWY 74 (277)
T ss_pred EEEEeecCCCCCHHHHHHHHHHHHHHHhcCCC------EEEeCCCccccCCCCCCcchHHHHHHHHHccchh--hcCCeE
Confidence 7899997553 1 344444433221 1111 478899997 555322 122222222 21 234699
Q ss_pred EecCCcchh
Q 004198 650 LIRGNHEAA 658 (769)
Q Consensus 650 llrGNHE~~ 658 (769)
.+.||||..
T Consensus 75 ~v~GNHD~~ 83 (277)
T cd07378 75 LVLGNHDYS 83 (277)
T ss_pred EecCCcccC
Confidence 999999975
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma |
| >KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=82.70 E-value=2.5 Score=46.69 Aligned_cols=42 Identities=33% Similarity=0.430 Sum_probs=30.7
Q ss_pred eEEEeccccCCCCCh--HHHHHHHHHhhhcCCC----ceEEecCCcch
Q 004198 616 DYLFLGDYVDRGQHS--LETITLLLALKIEYPE----NVHLIRGNHEA 657 (769)
Q Consensus 616 ~~vfLGD~vDrG~~s--~e~l~ll~~lk~~~p~----~v~llrGNHE~ 657 (769)
-++||||++|-|... -|--.....+|..|+. .++.+.||||-
T Consensus 96 vvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 96 VVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGRKGNIKVIYIAGNHDI 143 (410)
T ss_pred EEEEeccccccCccCChHHHHHHHHHHHHhhCCCCCCeeEEeCCcccc
Confidence 467799999988753 4445556666655554 78899999996
|
|
| >cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=82.00 E-value=2.8 Score=44.02 Aligned_cols=35 Identities=23% Similarity=0.159 Sum_probs=20.9
Q ss_pred EEEeccccCCCCCh-----HHHHHHHHHhhhcCCCceEEecCCcch
Q 004198 617 YLFLGDYVDRGQHS-----LETITLLLALKIEYPENVHLIRGNHEA 657 (769)
Q Consensus 617 ~vfLGD~vDrG~~s-----~e~l~ll~~lk~~~p~~v~llrGNHE~ 657 (769)
+|..||+++..+.+ ..++..+..+ + --.+. ||||.
T Consensus 55 ~l~~GD~~~gs~~~~~~~g~~~~~~l~~~----g-~da~~-GNHef 94 (264)
T cd07411 55 LLDGGDTWQGSGEALYTRGQAMVDALNAL----G-VDAMV-GHWEF 94 (264)
T ss_pred EEeCCCccCCChHHhhcCChhHHHHHHhh----C-CeEEe-ccccc
Confidence 34589999876543 2444444443 2 23344 99995
|
SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy |
| >KOG2055 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=81.91 E-value=43 Score=37.24 Aligned_cols=153 Identities=17% Similarity=0.197 Sum_probs=76.6
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCC
Q 004198 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHS 124 (769)
Q Consensus 45 ~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~ 124 (769)
.-.+.+.+|.++ +-.+|..|-.+|. +++..--.-.|......+.-|...++++|.
T Consensus 224 ~~plllvaG~d~-----------------~lrifqvDGk~N~--~lqS~~l~~fPi~~a~f~p~G~~~i~~s~r------ 278 (514)
T KOG2055|consen 224 TAPLLLVAGLDG-----------------TLRIFQVDGKVNP--KLQSIHLEKFPIQKAEFAPNGHSVIFTSGR------ 278 (514)
T ss_pred CCceEEEecCCC-----------------cEEEEEecCccCh--hheeeeeccCccceeeecCCCceEEEeccc------
Confidence 457888999763 2345666666655 343321000111112222223447777775
Q ss_pred cCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCC
Q 004198 125 TDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPS 204 (769)
Q Consensus 125 ~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~ 204 (769)
..-+|.||+.+ .+-.++.....++ .+.-+...+.....++++-|+.+. +..+...++ .|..--.. .
T Consensus 279 rky~ysyDle~--ak~~k~~~~~g~e-~~~~e~FeVShd~~fia~~G~~G~-----I~lLhakT~--eli~s~Ki----e 344 (514)
T KOG2055|consen 279 RKYLYSYDLET--AKVTKLKPPYGVE-EKSMERFEVSHDSNFIAIAGNNGH-----IHLLHAKTK--ELITSFKI----E 344 (514)
T ss_pred ceEEEEeeccc--cccccccCCCCcc-cchhheeEecCCCCeEEEcccCce-----EEeehhhhh--hhhheeee----c
Confidence 34589999998 5577773222222 222222222233346666666553 555666666 44221111 2
Q ss_pred cccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCC
Q 004198 205 ARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRN 243 (769)
Q Consensus 205 ~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~ 243 (769)
.+...........+|+++||. ..+|.+|....
T Consensus 345 G~v~~~~fsSdsk~l~~~~~~-------GeV~v~nl~~~ 376 (514)
T KOG2055|consen 345 GVVSDFTFSSDSKELLASGGT-------GEVYVWNLRQN 376 (514)
T ss_pred cEEeeEEEecCCcEEEEEcCC-------ceEEEEecCCc
Confidence 222222222334577887774 36788887655
|
|
| >PF08268 FBA_3: F-box associated domain; InterPro: IPR013187 This domain occurs in a diverse superfamily of genes in plants | Back alignment and domain information |
|---|
Probab=81.78 E-value=29 Score=31.87 Aligned_cols=86 Identities=13% Similarity=0.166 Sum_probs=53.7
Q ss_pred EEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCC-CccCceeEE
Q 004198 106 AAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGK-RVLSDAWAL 184 (769)
Q Consensus 106 ~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~-~~~~dv~~~ 184 (769)
+++++.+|..... .....+.+.+||+.+ .+|..+..............++.+++ +|-++.-.... ...-++|++
T Consensus 2 icinGvly~~a~~--~~~~~~~IvsFDv~~--E~f~~i~~P~~~~~~~~~~~L~~~~G-~L~~v~~~~~~~~~~~~iWvL 76 (129)
T PF08268_consen 2 ICINGVLYWLAWS--EDSDNNVIVSFDVRS--EKFRFIKLPEDPYSSDCSSTLIEYKG-KLALVSYNDQGEPDSIDIWVL 76 (129)
T ss_pred EEECcEEEeEEEE--CCCCCcEEEEEEcCC--ceEEEEEeeeeeccccCccEEEEeCC-eEEEEEecCCCCcceEEEEEe
Confidence 4577878877765 333457799999999 55877753212344556667767776 44444333322 234688998
Q ss_pred e-CCCCCceEEEcCC
Q 004198 185 D-TAQKPYVWQRLNP 198 (769)
Q Consensus 185 d-~~~~~~~W~~v~~ 198 (769)
+ .++. +|++...
T Consensus 77 eD~~k~--~Wsk~~~ 89 (129)
T PF08268_consen 77 EDYEKQ--EWSKKHI 89 (129)
T ss_pred eccccc--eEEEEEE
Confidence 4 5555 8988754
|
Most examples are found C-terminal to an F-box (IPR001810 from INTERPRO), a 60 amino acid motif involved in ubiquitination of target proteins to mark them for degradation. Two-hybid experiments support the idea that most members are interchangeable F-box subunits of SCF E3 complexes []. Some members have two copies of this domain. |
| >PLN00033 photosystem II stability/assembly factor; Provisional | Back alignment and domain information |
|---|
Probab=81.09 E-value=99 Score=34.61 Aligned_cols=94 Identities=12% Similarity=0.211 Sum_probs=48.0
Q ss_pred CCcEEEecCCCCCCccc--ccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEE
Q 004198 84 TRKWTRIRPAGEPPSPR--AAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLV 161 (769)
Q Consensus 84 ~~~W~~l~~~g~~P~~R--~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~ 161 (769)
-.+|++..........+ ...++...++..|++|-.+ .+|-......+|+++.....+|.. ++.....
T Consensus 119 G~tW~~~~~~~~~~~~~~~~l~~v~f~~~~g~~vG~~G---------~il~T~DgG~tW~~~~~~~~~p~~--~~~i~~~ 187 (398)
T PLN00033 119 GKTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIIGKPA---------ILLHTSDGGETWERIPLSPKLPGE--PVLIKAT 187 (398)
T ss_pred CCCceECccCcccccccccceeeeEEECCEEEEEcCce---------EEEEEcCCCCCceECccccCCCCC--ceEEEEE
Confidence 35788764221111112 2344555677888886431 445444444679998643233433 3334445
Q ss_pred CCcEEEEEecCCCCCccCceeEEeCCCCCceEEEc
Q 004198 162 SQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRL 196 (769)
Q Consensus 162 ~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v 196 (769)
.+...++.|.. ..+++-+-... .|+.+
T Consensus 188 ~~~~~~ivg~~------G~v~~S~D~G~--tW~~~ 214 (398)
T PLN00033 188 GPKSAEMVTDE------GAIYVTSNAGR--NWKAA 214 (398)
T ss_pred CCCceEEEecc------ceEEEECCCCC--CceEc
Confidence 55456666631 22444433333 79886
|
|
| >KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=80.59 E-value=8 Score=36.23 Aligned_cols=104 Identities=28% Similarity=0.359 Sum_probs=70.6
Q ss_pred EEEEccCCC--CHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhh
Q 004198 583 VKVFGDLHG--QFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADI 660 (769)
Q Consensus 583 i~viGDiHG--~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~ 660 (769)
+.++||+|= ...+|-.-|+++-.|..- ..++++|++. |.|++++|..+. ..++++||--|..
T Consensus 3 vL~lgD~HiP~Ra~~Lp~KFkklLvPgki-----~hilctGNlc-----s~e~~dylk~l~----~dvhiVrGeFD~~-- 66 (183)
T KOG3325|consen 3 VLVLGDLHIPHRANDLPAKFKKLLVPGKI-----QHILCTGNLC-----SKESYDYLKTLS----SDVHIVRGEFDEN-- 66 (183)
T ss_pred EEEeccccCCccccccCHHHHhccCCCce-----eEEEEeCCcc-----hHHHHHHHHhhC----CCcEEEecccCcc--
Confidence 578999985 345565666666566442 1789999975 789999998875 6999999977652
Q ss_pred hhccCCHHHHHHHhCCCCchhhhHHHhHhhccccceEEEeceEEEEcCCCCCCCCChHHhhhccCCccc
Q 004198 661 NALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITM 729 (769)
Q Consensus 661 ~~~~g~~~e~~~~~~~~~~~~~~~~~~~~f~~lP~~~~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~ 729 (769)
.+|.+.. ...+-.-||-|+||-.--.+.+.+.+..+.|-++.
T Consensus 67 -----------~~yP~~k----------------vvtvGqfkIG~chGhqViP~gd~~sL~~LaRqldv 108 (183)
T KOG3325|consen 67 -----------LKYPENK----------------VVTVGQFKIGLCHGHQVIPWGDPESLALLARQLDV 108 (183)
T ss_pred -----------ccCCccc----------------eEEeccEEEEeecCcEeecCCCHHHHHHHHHhcCC
Confidence 2343320 00111137999999876556778888888886654
|
|
| >PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases | Back alignment and domain information |
|---|
Probab=80.22 E-value=6.4 Score=34.39 Aligned_cols=42 Identities=17% Similarity=0.245 Sum_probs=31.8
Q ss_pred chHHHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceeee
Q 004198 528 QGLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQL 579 (769)
Q Consensus 528 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~ 579 (769)
..+++.|++.+-+.+ .|....+..|+.++.++|+++|++++|
T Consensus 54 ~efv~~mie~FK~~K----------~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 54 LEFVKAMIEWFKNQK----------KLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp HHHHHHHHHHHHCT--------------HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred HHHHHHHHHHHHhCC----------CccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 456788888877553 477888999999999999999999985
|
; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D .... |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 769 | ||||
| 1jk7_A | 323 | Crystal Structure Of The Tumor-Promoter Okadaic Aci | 2e-49 | ||
| 2o8a_A | 329 | Rat Pp1cgamma Complexed With Mouse Inhibitor-2 Leng | 2e-49 | ||
| 1s70_A | 330 | Complex Between Protein Ser/thr Phosphatase-1 (delt | 4e-49 | ||
| 1u32_A | 293 | Crystal Structure Of A Protein Phosphatase-1: Calci | 4e-49 | ||
| 1fjm_A | 330 | Protein SerineTHREONINE PHOSPHATASE-1 (Alpha Isofor | 2e-48 | ||
| 4g9j_A | 331 | Protein SerTHR PHOSPHATASE-1 In Complex With Cell-P | 2e-48 | ||
| 3egg_A | 329 | Crystal Structure Of A Complex Between Protein Phos | 2e-48 | ||
| 3n5u_B | 300 | Crystal Structure Of An Rb C-Terminal Peptide Bound | 4e-48 | ||
| 3v4y_A | 306 | Crystal Structure Of The First Nuclear Pp1 Holoenzy | 4e-48 | ||
| 3e7a_A | 299 | Crystal Structure Of Protein Phosphatase-1 Bound To | 5e-48 | ||
| 3c5w_C | 310 | Complex Between Pp2a-Specific Methylesterase Pme-1 | 4e-38 | ||
| 2ie4_C | 309 | Structure Of The Protein Phosphatase 2a Core Enzyme | 1e-37 | ||
| 2ie3_C | 309 | Structure Of The Protein Phosphatase 2a Core Enzyme | 1e-37 | ||
| 2nyl_C | 293 | Crystal Structure Of Protein Phosphatase 2a (Pp2a) | 1e-37 | ||
| 3p71_C | 304 | Crystal Structure Of The Complex Of Lcmt-1 And Pp2a | 1e-37 | ||
| 3fga_C | 309 | Structural Basis Of Pp2a And Sgo Interaction Length | 3e-37 | ||
| 2iae_C | 309 | Crystal Structure Of A Protein Phosphatase 2a (Pp2a | 4e-37 | ||
| 1aui_A | 521 | Human Calcineurin Heterodimer Length = 521 | 2e-32 | ||
| 1m63_A | 372 | Crystal Structure Of Calcineurin-Cyclophilin-Cyclos | 6e-32 | ||
| 2p6b_A | 383 | Crystal Structure Of Human Calcineurin In Complex W | 7e-32 | ||
| 1tco_A | 375 | Ternary Complex Of A Calcineurin A Fragment, Calcin | 7e-32 | ||
| 1mf8_A | 373 | Crystal Structure Of Human Calcineurin Complexed Wi | 8e-32 | ||
| 3ll8_A | 357 | Crystal Structure Of Calcineurin In Complex With Ak | 9e-32 | ||
| 2jog_A | 327 | Structure Of The Calcineurin-Nfat Complex Length = | 1e-31 | ||
| 1wao_1 | 477 | Pp5 Structure Length = 477 | 9e-25 | ||
| 1s95_A | 333 | Structure Of SerineTHREONINE PROTEIN PHOSPHATASE 5 | 1e-24 | ||
| 3h60_A | 315 | Catalytic Domain Of Human SerineTHREONINE PHOSPHATA | 1e-24 | ||
| 3icf_A | 335 | Structure Of Protein SerineTHREONINE PHOSPHATASE FR | 9e-22 |
| >pdb|1JK7|A Chain A, Crystal Structure Of The Tumor-Promoter Okadaic Acid Bound To Protein Phosphatase-1 Length = 323 | Back alignment and structure |
|
| >pdb|2O8A|A Chain A, Rat Pp1cgamma Complexed With Mouse Inhibitor-2 Length = 329 | Back alignment and structure |
|
| >pdb|1S70|A Chain A, Complex Between Protein Ser/thr Phosphatase-1 (delta) And The Myosin Phosphatase Targeting Subunit 1 (mypt1) Length = 330 | Back alignment and structure |
|
| >pdb|1U32|A Chain A, Crystal Structure Of A Protein Phosphatase-1: Calcineurin Hybrid Bound To Okadaic Acid Length = 293 | Back alignment and structure |
|
| >pdb|1FJM|A Chain A, Protein SerineTHREONINE PHOSPHATASE-1 (Alpha Isoform, Type 1) Complexed With Microcystin-Lr Toxin Length = 330 | Back alignment and structure |
|
| >pdb|4G9J|A Chain A, Protein SerTHR PHOSPHATASE-1 In Complex With Cell-Permeable Peptide Length = 331 | Back alignment and structure |
|
| >pdb|3EGG|A Chain A, Crystal Structure Of A Complex Between Protein Phosphatase 1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of Spinophilin Length = 329 | Back alignment and structure |
|
| >pdb|3V4Y|A Chain A, Crystal Structure Of The First Nuclear Pp1 Holoenzyme Length = 306 | Back alignment and structure |
|
| >pdb|3E7A|A Chain A, Crystal Structure Of Protein Phosphatase-1 Bound To The Natural Toxin Nodularin-R Length = 299 | Back alignment and structure |
|
| >pdb|3C5W|C Chain C, Complex Between Pp2a-Specific Methylesterase Pme-1 And Pp2a Core Enzyme Length = 310 | Back alignment and structure |
|
| >pdb|2IE4|C Chain C, Structure Of The Protein Phosphatase 2a Core Enzyme Bound To Okadaic Acid Length = 309 | Back alignment and structure |
|
| >pdb|2IE3|C Chain C, Structure Of The Protein Phosphatase 2a Core Enzyme Bound To Tumor- Inducing Toxins Length = 309 | Back alignment and structure |
|
| >pdb|2NYL|C Chain C, Crystal Structure Of Protein Phosphatase 2a (Pp2a) Holoenzyme With The Catalytic Subunit Carboxyl Terminus Truncated Length = 293 | Back alignment and structure |
|
| >pdb|3P71|C Chain C, Crystal Structure Of The Complex Of Lcmt-1 And Pp2a Length = 304 | Back alignment and structure |
|
| >pdb|3FGA|C Chain C, Structural Basis Of Pp2a And Sgo Interaction Length = 309 | Back alignment and structure |
|
| >pdb|2IAE|C Chain C, Crystal Structure Of A Protein Phosphatase 2a (Pp2a) Holoenzyme. Length = 309 | Back alignment and structure |
|
| >pdb|1AUI|A Chain A, Human Calcineurin Heterodimer Length = 521 | Back alignment and structure |
|
| >pdb|1M63|A Chain A, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin Shows Common But Distinct Recognition Of Immunophilin-Drug Complexes Length = 372 | Back alignment and structure |
|
| >pdb|2P6B|A Chain A, Crystal Structure Of Human Calcineurin In Complex With Pvivit Peptide Length = 383 | Back alignment and structure |
|
| >pdb|1TCO|A Chain A, Ternary Complex Of A Calcineurin A Fragment, Calcineurin B, Fkbp12 And The Immunosuppressant Drug Fk506 (tacrolimus) Length = 375 | Back alignment and structure |
|
| >pdb|1MF8|A Chain A, Crystal Structure Of Human Calcineurin Complexed With Cyclosporin A And Human Cyclophilin Length = 373 | Back alignment and structure |
|
| >pdb|3LL8|A Chain A, Crystal Structure Of Calcineurin In Complex With Akap79 Peptide Length = 357 | Back alignment and structure |
|
| >pdb|2JOG|A Chain A, Structure Of The Calcineurin-Nfat Complex Length = 327 | Back alignment and structure |
|
| >pdb|1WAO|1 Chain 1, Pp5 Structure Length = 477 | Back alignment and structure |
|
| >pdb|1S95|A Chain A, Structure Of SerineTHREONINE PROTEIN PHOSPHATASE 5 Length = 333 | Back alignment and structure |
|
| >pdb|3H60|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5 (Pp5c)with Two Mn2+ Atoms Length = 315 | Back alignment and structure |
|
| >pdb|3ICF|A Chain A, Structure Of Protein SerineTHREONINE PHOSPHATASE FROM SACCHAROMYCES Cerevisiae With Similarity To Human Phosphatase Pp5 Length = 335 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 769 | |||
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 1e-94 | |
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 2e-94 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 8e-83 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 1e-77 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 1e-73 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 2e-73 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 2e-71 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 2e-70 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 4e-29 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 2e-26 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 2e-07 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 2e-20 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 6e-18 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 2e-15 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 5e-13 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 2e-08 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 2e-08 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 2e-15 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 1e-12 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 1e-10 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 6e-13 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 1e-12 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 2e-08 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 6e-06 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 7e-13 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 3e-10 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 5e-06 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 7e-13 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 3e-12 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 3e-10 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 1e-12 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-12 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 2e-11 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 2e-11 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 3e-11 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 7e-10 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 3e-11 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 8e-10 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 2e-08 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 3e-06 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 5e-05 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 5e-05 |
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 Length = 330 | Back alignment and structure |
|---|
Score = 297 bits (762), Expect = 1e-94
Identities = 97/210 (46%), Positives = 132/210 (62%), Gaps = 15/210 (7%)
Query: 533 KIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQ 592
II LL + + + L E+ LC + +IF+ +P +L+L AP+K+ GD+HGQ
Sbjct: 11 SIIGRLLEVQGSRPG--KNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQ 68
Query: 593 FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIR 652
+ DL+RLF+ GFP + +YLFLGDYVDRG+ SLETI LLLA KI+YPEN L+R
Sbjct: 69 YYDLLRLFEYGGFPPES------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 122
Query: 653 GNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGR 712
GNHE A IN ++GF EC R W F FNCLP+AA++++KI C HGG+
Sbjct: 123 GNHECASINRIYGFYDECKRRYNIK----LWKTFTDCFNCLPIAAIVDEKIFCCHGGLSP 178
Query: 713 SIHSVEQIEKLERPITM-DAGSIILMDLLW 741
+ S+EQI ++ RP + D G +L DLLW
Sbjct: 179 DLQSMEQIRRIMRPTDVPDQG--LLCDLLW 206
|
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* Length = 299 | Back alignment and structure |
|---|
Score = 295 bits (757), Expect = 2e-94
Identities = 97/210 (46%), Positives = 132/210 (62%), Gaps = 15/210 (7%)
Query: 533 KIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQ 592
II LL + + + L E+ LC + +IF+ +P +L+L AP+K+ GD+HGQ
Sbjct: 10 SIIGRLLEVQGSRPG--KNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQ 67
Query: 593 FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIR 652
+ DL+RLF+ GFP + +YLFLGDYVDRG+ SLETI LLLA KI+YPEN L+R
Sbjct: 68 YYDLLRLFEYGGFPPES------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 121
Query: 653 GNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGR 712
GNHE A IN ++GF EC R W F FNCLP+AA++++KI C HGG+
Sbjct: 122 GNHECASINRIYGFYDECKRRYNIK----LWKTFTDCFNCLPIAAIVDEKIFCCHGGLSP 177
Query: 713 SIHSVEQIEKLERPITM-DAGSIILMDLLW 741
+ S+EQI ++ RP + D G +L DLLW
Sbjct: 178 DLQSMEQIRRIMRPTDVPDQG--LLCDLLW 205
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* Length = 309 | Back alignment and structure |
|---|
Score = 265 bits (679), Expect = 8e-83
Identities = 83/210 (39%), Positives = 120/210 (57%), Gaps = 22/210 (10%)
Query: 533 KIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQ 592
+ I L + L +V LC A++I +E V ++R PV V GD+HGQ
Sbjct: 12 QWIEQLNECKQ----------LSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQ 61
Query: 593 FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIR 652
F DLM LF G +YLF+GDYVDRG +S+ET+TLL+ALK+ Y E + ++R
Sbjct: 62 FHDLMELFRIGGKSPDT------NYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILR 115
Query: 653 GNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGR 712
GNHE+ I ++GF EC+ + G N + W F LF+ LPL AL++ +I C+HGG+
Sbjct: 116 GNHESRQITQVYGFYDECLRKYG-NANV--WKYFTDLFDYLPLTALVDGQIFCLHGGLSP 172
Query: 713 SIHSVEQIEKLERPITM-DAGSIILMDLLW 741
SI +++ I L+R + G + DLLW
Sbjct: 173 SIDTLDHIRALDRLQEVPHEG--PMCDLLW 200
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A Length = 357 | Back alignment and structure |
|---|
Score = 253 bits (648), Expect = 1e-77
Identities = 75/190 (39%), Positives = 105/190 (55%), Gaps = 15/190 (7%)
Query: 554 LDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDIT 613
L+ + I QE +L + APV V GD+HGQF DLM+LF+ G P+
Sbjct: 43 LEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT---- 98
Query: 614 YIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIER 673
YLFLGDYVDRG S+E + L ALKI YP+ + L+RGNHE + F F+ EC +
Sbjct: 99 --RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIK 156
Query: 674 MGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITM-DAG 732
E + F+CLPLAAL+ ++ +C+HGG+ I++++ I KL+R G
Sbjct: 157 YSER----VYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG 212
Query: 733 SIILM-DLLW 741
M D+LW
Sbjct: 213 ---PMCDILW 219
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A Length = 315 | Back alignment and structure |
|---|
Score = 241 bits (617), Expect = 1e-73
Identities = 62/190 (32%), Positives = 100/190 (52%), Gaps = 17/190 (8%)
Query: 558 EVGELCYAAEQIFMQEPTVLQLR----APVKVFGDLHGQFGDLMRLFDEYGFPSTAGDIT 613
++ +++ + T+++ + V GD HGQF DL+ +F+ G PS
Sbjct: 33 CAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLPSETNP-- 90
Query: 614 YIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIER 673
Y+F GD+VDRG S+E I L K+ YP++ HL+RGNHE ++N ++GF E +
Sbjct: 91 ---YIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAK 147
Query: 674 MGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIG-RSIHSVEQIEKLERPITM-DA 731
+ F+++F LPLA I K++ MHGG+ +++ I K+ER D+
Sbjct: 148 YTAQ----MYELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDS 203
Query: 732 GSIILMDLLW 741
G + DLLW
Sbjct: 204 G--PMCDLLW 211
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} Length = 335 | Back alignment and structure |
|---|
Score = 241 bits (617), Expect = 2e-73
Identities = 65/192 (33%), Positives = 95/192 (49%), Gaps = 19/192 (9%)
Query: 558 EVGELCYAAEQIFMQEPTVLQLR------APVKVFGDLHGQFGDLMRLFDEYGFPSTAGD 611
V + A+ +F QEP++++L + V GD HGQF D++ LF ++G
Sbjct: 35 YVAAIISHADTLFRQEPSMVELENNSTPDVKISVCGDTHGQFYDVLNLFRKFGKVGP--- 91
Query: 612 ITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECI 671
YLF GD+VDRG S E L LKI +P N L RGNHE+ ++N ++GF EC
Sbjct: 92 --KHTYLFNGDFVDRGSWSCEVALLFYCLKILHPNNFFLNRGNHESDNMNKIYGFEDECK 149
Query: 672 ERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIG-RSIHSVEQIEKLERPITM- 729
+ + + F Q F LPLA LI + MHGG+ ++ + ++R
Sbjct: 150 YKYSQR----IFNMFAQSFESLPLATLINNDYLVMHGGLPSDPSATLSDFKNIDRFAQPP 205
Query: 730 DAGSIILMDLLW 741
G M+LLW
Sbjct: 206 RDG--AFMELLW 215
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 Length = 521 | Back alignment and structure |
|---|
Score = 241 bits (617), Expect = 2e-71
Identities = 75/190 (39%), Positives = 105/190 (55%), Gaps = 15/190 (7%)
Query: 554 LDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDIT 613
L+ + I QE +L + APV V GD+HGQF DLM+LF+ G P+
Sbjct: 56 LEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT---- 111
Query: 614 YIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIER 673
YLFLGDYVDRG S+E + L ALKI YP+ + L+RGNHE + F F+ EC +
Sbjct: 112 --RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIK 169
Query: 674 MGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITM-DAG 732
E + F+CLPLAAL+ ++ +C+HGG+ I++++ I KL+R G
Sbjct: 170 YSER----VYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG 225
Query: 733 SIILM-DLLW 741
M D+LW
Sbjct: 226 ---PMCDILW 232
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 Length = 477 | Back alignment and structure |
|---|
Score = 237 bits (607), Expect = 2e-70
Identities = 62/190 (32%), Positives = 100/190 (52%), Gaps = 17/190 (8%)
Query: 558 EVGELCYAAEQIFMQEPTVLQLR----APVKVFGDLHGQFGDLMRLFDEYGFPSTAGDIT 613
++ +++ + T+++ + V GD HGQF DL+ +F+ G PS
Sbjct: 186 CAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLPSETNP-- 243
Query: 614 YIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIER 673
Y+F GD+VDRG S+E I L K+ YP++ HL+RGNHE ++N ++GF E +
Sbjct: 244 ---YIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAK 300
Query: 674 MGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIG-RSIHSVEQIEKLERPITM-DA 731
+ F+++F LPLA I K++ MHGG+ +++ I K+ER D+
Sbjct: 301 YTAQ----MYELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDS 356
Query: 732 GSIILMDLLW 741
G + DLLW
Sbjct: 357 G--PMCDLLW 364
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Length = 695 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 4e-29
Identities = 42/276 (15%), Positives = 89/276 (32%), Gaps = 41/276 (14%)
Query: 15 TLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVT 74
++ + + P R HT T ++ +L+L GG A P L
Sbjct: 425 DMKNIEVSSSEVPVARMCHTFTTIS----RNNQLLLIGGRKA---------PHQGL---- 467
Query: 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLD 132
+ ++D+ TR+W+ I+ R H+A ++ G +++ GG+ + + +
Sbjct: 468 SDNWIFDMKTREWSMIKS---LSHTRFRHSACSLPDGNVLIL-GGVT----EGPAMLLYN 519
Query: 133 LTNDKFKWHRVVVQGQGPGPRYGH---VMDLVSQRYLVSVSGNDGKRVLSDA---WALDT 186
+T + + V + + D VS++ ++ G + +SD + D
Sbjct: 520 VT--EEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDA 577
Query: 187 AQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMH-RNGQ 245
+ R + + L+ GG SG + + +
Sbjct: 578 ENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSET 637
Query: 246 WEWTLAPGVAPSP----RYQHAAVFVGA-RLHVTGG 276
+ V +H+ GG
Sbjct: 638 LTSIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGG 673
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Length = 695 | Back alignment and structure |
|---|
Score = 114 bits (286), Expect = 2e-26
Identities = 56/324 (17%), Positives = 90/324 (27%), Gaps = 37/324 (11%)
Query: 84 TRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRV 143
+ ++ E P R G V + GG + +++ L + DK +
Sbjct: 373 VDEDYQLLE-CECPINRKFGDVDVAGNDVFYMGGSN--PYRVNEILQLSIHYDKIDMKNI 429
Query: 144 VVQ-GQGPGPRYGHVMDLVSQRYLVSVSG--NDGKRVLSDAWALDTAQKPYVWQRLNPEG 200
V + P R H +S+ + + G + LSD W D + W +
Sbjct: 430 EVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTR--EWSMI---K 484
Query: 201 DRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRY 260
R +A + DG L+ GG A L L ++
Sbjct: 485 SLSHTRFRHSACSLPDGNVLILGGVTEGPAML-----LYNVTEEIFKDVTPKDEFFQNSL 539
Query: 261 QHAAVFVGARLH---VTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHG 317
A + + GG + +A + D T
Sbjct: 540 VSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATE---------PITVIKKL 590
Query: 318 EHDPSLELMRRCRHASASIGV-RIYIYGGLKGDILLDDFLVAENSPFQSDVNSPLLTSER 376
+H +R I ++ I GG L D NS D S LTS
Sbjct: 591 QHPL----FQRYGSQIKYITPRKLLIVGGTSPSGLFDR----TNSIISLDPLSETLTSIP 642
Query: 377 APTHTGSKVNQTNLGYVTTPTPDG 400
+ G+ T G
Sbjct: 643 ISRRIWEDHSLMLAGFSLVSTSMG 666
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Length = 695 | Back alignment and structure |
|---|
Score = 53.2 bits (127), Expect = 2e-07
Identities = 25/182 (13%), Positives = 54/182 (29%), Gaps = 34/182 (18%)
Query: 182 WALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMH 241
+ +L E + P R + + +F + G + + L +
Sbjct: 365 SISEINLTVDEDYQL-LECECPINRKFGDVDVAGNDVFYMGGSN---PYRVNEILQLSI- 419
Query: 242 RNGQWEWT---LAPGVAPSPRYQHAAVFVGA--RLHVTGGALRGGRAIEGEAAVAVLDTA 296
+ + ++ P R H + +L + GG + + + + D
Sbjct: 420 HYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGL---SDNWIFDMK 476
Query: 297 AGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIG-VRIYIYGGLK--GDILLD 353
W S + R RH++ S+ + I GG+ +LL
Sbjct: 477 TREW---------SMI-----KSLSH----TRFRHSACSLPDGNVLILGGVTEGPAMLLY 518
Query: 354 DF 355
+
Sbjct: 519 NV 520
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A Length = 342 | Back alignment and structure |
|---|
Score = 92.6 bits (229), Expect = 2e-20
Identities = 34/174 (19%), Positives = 63/174 (36%), Gaps = 14/174 (8%)
Query: 567 EQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYID--YLFLGDYV 624
+I P V D+HGQ+ L+ L + + G+ + + + GD
Sbjct: 57 SEIKQIMPDTYLGIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIF 116
Query: 625 DRGQHSLETITLLLALKIEYPE---NVHLIRGNHEAADINALFGFRLEC---IERMGEND 678
DRG E + + L + + VHL+ GNHE + + + +
Sbjct: 117 DRGHQVNEVLWFMYQLDQQARDAGGMVHLLMGNHEQMVLGGDLRYVHQRYDIATTLINRP 176
Query: 679 GIWAWTRFNQLFNCLPLAALIEK--KIICMHGGI----GRSIHSVEQIEKLERP 726
++ ++ L I K ++ MHGGI ++++ L R
Sbjct: 177 YNKLYSADTEIGQWLRSKNTIIKINDVLYMHGGISSEWISRELTLDKANALYRA 230
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Length = 357 | Back alignment and structure |
|---|
Score = 85.0 bits (210), Expect = 6e-18
Identities = 55/356 (15%), Positives = 85/356 (23%), Gaps = 71/356 (19%)
Query: 25 DAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYD--V 82
+ P P T + + G+ + + D
Sbjct: 5 ETPVPFKSGTGAID------NDTVYIGLGSA------------------GTAWYKLDTQA 40
Query: 83 LTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHS----TDDLYVLDLTNDKF 138
+KWT + P PR +A + + GGIG +D++ + +
Sbjct: 41 KDKKWTALAAF--PGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN-- 96
Query: 139 KWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKP-------- 190
W + + P GHV V G + L+ A K
Sbjct: 97 SWVK--LMSHAPMGMAGHVT-FVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKIN 153
Query: 191 ----------YVWQRL----NPEGDR-------PSARMYATASARSDGMFLLCGGRDASG 229
Y + + +P + P A L G G
Sbjct: 154 AHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPG 213
Query: 230 APLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAA 289
+ L N LAP +P A L GGA G
Sbjct: 214 LRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKG----SREN 269
Query: 290 VAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGG 345
A L ++ G + L R S + I GG
Sbjct: 270 YQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGEL-SQGRAYGVSLPWNNSLLIIGG 324
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Length = 357 | Back alignment and structure |
|---|
Score = 77.7 bits (191), Expect = 2e-15
Identities = 31/188 (16%), Positives = 60/188 (31%), Gaps = 16/188 (8%)
Query: 72 GVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVL 131
+ +D T++W+ + P A A G G G TD ++ L
Sbjct: 165 FFNKFLLSFDPSTQQWSYAGES--PWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFEL 222
Query: 132 DLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLV----SVSGNDGKRVLSDAWALDTA 187
D T + KW+++ P G + + + G+ +A +
Sbjct: 223 DFTGNNLKWNKLAPVSS-PDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGL 281
Query: 188 QKPYVWQRLNPEGDR-------PSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLM 240
+K Y + R Y S + L+ GG A G + D+ + +
Sbjct: 282 KKSYSTDIHLWHNGKWDKSGELSQGRAYG-VSLPWNNSLLIIGGETAGGKAVTDSVLITV 340
Query: 241 HRNGQWEW 248
++ +
Sbjct: 341 -KDNKVTV 347
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Length = 357 | Back alignment and structure |
|---|
Score = 70.4 bits (172), Expect = 5e-13
Identities = 49/319 (15%), Positives = 82/319 (25%), Gaps = 71/319 (22%)
Query: 13 YRTLETYWDTDEDAPG-PRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLA 71
+ + W PG PR T + L +FGG G T
Sbjct: 38 TQAKDKKWTALAAFPGGPRDQATSAFI------DGNLYVFGGIGKNSEGLTQ-------- 83
Query: 72 GVTNSVHLYDVLTRKWTRIRPAGEPP-------------------------------SPR 100
V N VH Y+ T W ++ +
Sbjct: 84 -VFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEA 142
Query: 101 AAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPG-PRYGHVMD 159
+ A + L D + + W G+ P G +
Sbjct: 143 GKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQ--WSYA---GESPWYGTAGAAV- 196
Query: 160 LVSQRYLVSVSGNDGKRVLSDA-WALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGM 218
+ ++G + +DA + LD W +L P + + S+
Sbjct: 197 VNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAP--VSSPDGVAGGFAGISNDS 254
Query: 219 FLLCGGRDASGAPLADAYGLLMHRNGQW-------------EWTLAPGVAPSPRYQHAAV 265
+ GG G+ G G +W + G R ++
Sbjct: 255 LIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKS-GELSQGRAYGVSL 313
Query: 266 FVGARLHVTGGALRGGRAI 284
L + GG GG+A+
Sbjct: 314 PWNNSLLIIGGETAGGKAV 332
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Length = 357 | Back alignment and structure |
|---|
Score = 56.1 bits (135), Expect = 2e-08
Identities = 26/154 (16%), Positives = 41/154 (26%), Gaps = 25/154 (16%)
Query: 203 PSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQH 262
P T A + + G + Y L +WT PR Q
Sbjct: 7 PVPFKSGTG-AIDNDTVYIGLGSAGT-----AWYKLDTQAK-DKKWTALAAFPGGPRDQA 59
Query: 263 AAVFVGARLHVTGGALRGGRAIEGE-AAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDP 321
+ F+ L+V GG + + V + W
Sbjct: 60 TSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSW-----------------VKLM 102
Query: 322 SLELMRRCRHASASIGVRIYIYGGLKGDILLDDF 355
S M H + + Y+ GG+ +I F
Sbjct: 103 SHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYF 136
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Length = 357 | Back alignment and structure |
|---|
Score = 56.1 bits (135), Expect = 2e-08
Identities = 23/147 (15%), Positives = 45/147 (30%), Gaps = 22/147 (14%)
Query: 11 PSYRTLETY----------WDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGG 60
P RT + W+ P A + + ++F G +G
Sbjct: 212 PGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDS-----LIFAGGAGFKGS 266
Query: 61 ATSSAPGIRLAG----VTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQG 116
+ G A + S ++ KW + GE RA + ++ G
Sbjct: 267 RENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKS---GELSQGRAYGVSLPWNNSLLIIG 323
Query: 117 GIGPAGHSTDDLYVLDLTNDKFKWHRV 143
G G + D ++ + ++K +
Sbjct: 324 GETAGGKAVTDSVLITVKDNKVTVQNL 350
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Length = 315 | Back alignment and structure |
|---|
Score = 77.0 bits (190), Expect = 2e-15
Identities = 46/258 (17%), Positives = 69/258 (26%), Gaps = 44/258 (17%)
Query: 27 PGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRK 86
P PRC L + + GG +G +SV YD L+ K
Sbjct: 86 PSPRCLFGLGEA------LNSIYVVGGREIKDGERC-----------LDSVMCYDRLSFK 128
Query: 87 WTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQ 146
W P P H + +V GG G + + V D + W +
Sbjct: 129 WGESDPL---PYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFE--WKEL--- 180
Query: 147 GQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSAR 206
R V ++ +G + S A W P R
Sbjct: 181 APMQTARSLFGA-TVHDGRIIVAAGVTDTGLTSSAEVYSITDN--KWAPFEA---FPQER 234
Query: 207 MYATASARSDGMFLLCGGRDASGAPLADAYGLLMH-------RNGQWEWTLAPGVAPSPR 259
+ + G GG + ++ +WE GV
Sbjct: 235 SSLSLVS-LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWE-----GVLREIA 288
Query: 260 YQHAAVFVGARLHVTGGA 277
Y A F+ RL+V
Sbjct: 289 YAAGATFLPVRLNVLRLT 306
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Length = 315 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 1e-12
Identities = 56/343 (16%), Positives = 96/343 (27%), Gaps = 68/343 (19%)
Query: 18 TYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSV 77
+ + P+ +L ++ + GG E ++
Sbjct: 24 ECYCASLSSQVPKNHVSLVTK------ENQVFVAGGLFYNEDNKEDP--------MSAYF 69
Query: 78 HLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHST-DDLYVLDLTN 135
+D L +W + P PSPR ++ V G G D + D +
Sbjct: 70 LQFDHLDSEWLGMPP---LPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLS 126
Query: 136 DKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSG--NDGKRVLSDAWALDTAQKPYVW 193
KW P YGH ++S LV V G ++ L+ D + W
Sbjct: 127 F--KWGES---DPLPYVVYGHT--VLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKF--EW 177
Query: 194 QRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGA-PLADAYGLLMHRNGQWEWTLAP 252
+ L P +AR A+ + + G +G A+ Y + + +W
Sbjct: 178 KELAP---MQTARSLFGATVHDGRII-VAAGVTDTGLTSSAEVYSI---TDNKWA-PFEA 229
Query: 253 GVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDT------AAGVWLDRNGL 306
P R + V + L+ GG GE L+ W
Sbjct: 230 --FPQERSSLSLVSLVGTLYAIGG-FATLETESGELVPTELNDIWRYNEEEKKW------ 280
Query: 307 VTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGD 349
E + + VR+ + K
Sbjct: 281 -----------EGVLR---EIAYAAGATFLPVRLNVLRLTKMA 309
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Length = 315 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 1e-10
Identities = 44/283 (15%), Positives = 76/283 (26%), Gaps = 48/283 (16%)
Query: 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDL---YVL 131
YD + + P+ + V GG+ + +D Y L
Sbjct: 13 EGAVAYDPAANECYCASLS--SQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFL 70
Query: 132 DLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSG---NDGKRVLSDAWALDTAQ 188
+ +W + P PR + + + V G DG+R L D
Sbjct: 71 QFDHLDSEWLGMPPL---PSPRCLFGL-GEALNSIYVVGGREIKDGERCLDSVMCYDRLS 126
Query: 189 KPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADA--YGLLMHRNGQW 246
W +P P T + + + GG+ + L Y + +W
Sbjct: 127 F--KWGESDP---LPYVVYGHTVLSH-MDLVYVIGGKGSDRKCLNKMCVYD---PKKFEW 177
Query: 247 EWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGL 306
+ LAP + R A R+ V G + ++ V W
Sbjct: 178 K-ELAP--MQTARSLFGATVHDGRIIVAAG--VTDTGL--TSSAEVYSITDNKW------ 224
Query: 307 VTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGD 349
+ R + S+ +Y GG
Sbjct: 225 -----------APFEAF-PQERSSLSLVSLVGTLYAIGGFATL 255
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Length = 301 | Back alignment and structure |
|---|
Score = 69.2 bits (170), Expect = 6e-13
Identities = 47/284 (16%), Positives = 77/284 (27%), Gaps = 44/284 (15%)
Query: 72 GVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVL 131
+ V YD T++W+ R A+ ++ + GG + L
Sbjct: 28 SPIDVVEKYDPKTQEWS---FLPSITRKRRYVASVSLHDRIYVIGGYD-GRSRLSSVECL 83
Query: 132 DL-TNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKP 190
D ++ W+ V R + G DG R + D
Sbjct: 84 DYTADEDGVWYSVA---PMNVRRGLAGA-TTLGDMIYVSGGFDGSRRHTSMERYDPNID- 138
Query: 191 YVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGA-PLADAYGLLMHRNGQWEWT 249
W L +AR A G+ GG D + Y G W
Sbjct: 139 -QWSMLGD---MQTAREGAGLVVA-SGVIYCLGGYDGLNILNSVEKY---DPHTGHWT-N 189
Query: 250 LAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTS 309
+ P + R + ++V GG ++V + W
Sbjct: 190 VTP--MATKRSGAGVALLNDHIYVVGGFDGTAHL----SSVEAYNIRTDSW--------- 234
Query: 310 SRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLD 353
S+ RC + + R+Y G G+ LL
Sbjct: 235 --------TTVTSM-TTPRCYVGATVLRGRLYAIAGYDGNSLLS 269
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Length = 301 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 1e-12
Identities = 51/261 (19%), Positives = 77/261 (29%), Gaps = 45/261 (17%)
Query: 97 PSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGH 156
PR A ++V GG G D + D + W + R
Sbjct: 3 QGPRTRARLGANEVLLVV-GGFGSQQSPIDVVEKYDPKTQE--WSFL---PSITRKRRYV 56
Query: 157 ---VMDLVSQRYLVSVSGNDGKRVLSDAWALDTA-QKPYVWQRLNPEGDRPSARMYATAS 212
+ + + G DG+ LS LD + VW + P R A A+
Sbjct: 57 ASVSLH----DRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAP---MNVRRGLAGAT 109
Query: 213 ARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLH 272
M + GG D S + + +W++ + + R V ++
Sbjct: 110 T-LGDMIYVSGGFDGSR-RHTSMERYDPNID---QWSMLGDM-QTAREGAGLVVASGVIY 163
Query: 273 VTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHA 332
GG G I +V D G W VT T +R
Sbjct: 164 CLGG--YDGLNIL--NSVEKYDPHTGHWT----NVTPMAT--------------KRSGAG 201
Query: 333 SASIGVRIYIYGGLKGDILLD 353
A + IY+ GG G L
Sbjct: 202 VALLNDHIYVVGGFDGTAHLS 222
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Length = 301 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 2e-08
Identities = 48/274 (17%), Positives = 79/274 (28%), Gaps = 54/274 (19%)
Query: 14 RTLETY------WDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPG 67
+E Y W R ++ R+ + GG G +
Sbjct: 31 DVVEKYDPKTQEWSFLPSITRKRRYVASVSL------HDRIYVIGG----YDGRSRL--- 77
Query: 68 IRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTD 126
+SV D + R A + + V G G H++
Sbjct: 78 -------SSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSM 130
Query: 127 DLYVLDLTNDKFKWHRVVVQGQGPGPRYGH---VMDLVSQRYLVSVSGNDGKRVLSDAWA 183
+ Y D D +W + G R G V + + G DG +L+
Sbjct: 131 ERY--DPNID--QWSML---GDMQTAREGAGLVVAS----GVIYCLGGYDGLNILNSVEK 179
Query: 184 LDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGA-PLADAYGLLMHR 242
D W + P + R A + + + GG D + +AY + R
Sbjct: 180 YDPHTG--HWTNVTP---MATKRSGAGVAL-LNDHIYVVGGFDGTAHLSSVEAYNI---R 230
Query: 243 NGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGG 276
W T+ +PR A + RL+ G
Sbjct: 231 TDSWT-TVTS--MTTPRCYVGATVLRGRLYAIAG 261
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Length = 301 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 6e-06
Identities = 31/155 (20%), Positives = 52/155 (33%), Gaps = 31/155 (20%)
Query: 203 PSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQH 262
R A ++ + L+ GG + +P+ + +W L R
Sbjct: 3 QGPRTRARLG--ANEVLLVVGGFGSQQSPIDVVE-KYDPKTQEWS-FLPS--ITRKRRYV 56
Query: 263 AAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAA---GVWLDRNGLVTSSRTSKGHGEH 319
A+V + R++V GG G + ++V LD A GVW +
Sbjct: 57 ASVSLHDRIYVIGG-YDGRSRL---SSVECLDYTADEDGVWYSVAPMNV----------- 101
Query: 320 DPSLELMRRCRHASASIGVRIYIYGGLKGDILLDD 354
RR + ++G IY+ GG G
Sbjct: 102 -------RRGLAGATTLGDMIYVSGGFDGSRRHTS 129
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Length = 306 | Back alignment and structure |
|---|
Score = 69.3 bits (170), Expect = 7e-13
Identities = 48/287 (16%), Positives = 78/287 (27%), Gaps = 51/287 (17%)
Query: 74 TNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDL 133
S ++ WT IR P R A +V GG + ++
Sbjct: 23 PQSCRYFNPKDYSWTDIRC---PFEKRRDAACVFWDNVVYILGGSQ--LFPIKRMDCYNV 77
Query: 134 TNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSG-NDGKRVLSDAWALDTAQKPYV 192
D W+ + PR ++ + + G G L DT +
Sbjct: 78 VKDS--WYSKLGPPT---PRDSLAA-CAAEGKIYTSGGSEVGNSALYLFECYDTRTE--S 129
Query: 193 WQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPL-----ADAYGLLMHRNGQWE 247
W + R +G+ +CGG + + Y W
Sbjct: 130 WHTKPS---MLTQRCSHGMVEA-NGLIYVCGGSLGNNVSGRVLNSCEVY---DPATETWT 182
Query: 248 WTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLV 307
L P R H VFV ++ GG + G G V D W
Sbjct: 183 -ELCPM--IEARKNHGLVFVKDKIFAVGG--QNGL--GGLDNVEYYDIKLNEW------- 228
Query: 308 TSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLDD 354
+ + + A++G +Y+ G +G L
Sbjct: 229 ----------KMVSPM-PWKGVTVKCAAVGSIVYVLAGFQGVGRLGH 264
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Length = 306 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 3e-10
Identities = 42/277 (15%), Positives = 77/277 (27%), Gaps = 59/277 (21%)
Query: 14 RTLETY------WDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPG 67
++ + W R + + GG
Sbjct: 24 QSCRYFNPKDYSWTDIRCPFEKRRDAACVFW------DNVVYILGG----SQLFP----- 68
Query: 68 IRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDD 127
+ Y+V+ W PP+PR + AA A + GG +
Sbjct: 69 ------IKRMDCYNVVKDSWYSKLG---PPTPRDSLAACAAEGKIYTSGGSEVGNSALYL 119
Query: 128 LYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTA 187
D + WH R H M + + + G+ G V L++
Sbjct: 120 FECYDTRTE--SWHTK---PSMLTQRCSHGM-VEANGLIYVCGGSLGNNVSGR--VLNSC 171
Query: 188 QKPYVWQRLNPEGDR-------PSARMYATASARSDGMFLLCGGRDASGA-PLADAYGLL 239
+ +P + AR D +F GG++ G + Y +
Sbjct: 172 ------EVYDPATETWTELCPMIEARKNHGLVFVKDKIF-AVGGQNGLGGLDNVEYYDI- 223
Query: 240 MHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGG 276
+ +W+ ++P P VG+ ++V G
Sbjct: 224 --KLNEWK-MVSP--MPWKGVTVKCAAVGSIVYVLAG 255
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Length = 306 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 5e-06
Identities = 34/183 (18%), Positives = 52/183 (28%), Gaps = 33/183 (18%)
Query: 174 GKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLA 233
G + W + R A D + + GG
Sbjct: 19 GGSQPQSCRYFNPKDY--SWTDIRCP---FEKRRDAAC-VFWDNVVYILGGSQLFPIKRM 72
Query: 234 DAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVL 293
D Y + W + P+PR AA +++ +GG+ G A+
Sbjct: 73 DCYNV---VKDSWY-SKLG--PPTPRDSLAACAAEGKIYTSGGSEVGNSAL---YLFECY 123
Query: 294 DTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLD 353
DT W PS+ L +RC H IY+ GG G+ +
Sbjct: 124 DTRTESW-----------------HTKPSM-LTQRCSHGMVEANGLIYVCGGSLGNNVSG 165
Query: 354 DFL 356
L
Sbjct: 166 RVL 168
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Length = 308 | Back alignment and structure |
|---|
Score = 69.3 bits (170), Expect = 7e-13
Identities = 42/284 (14%), Positives = 80/284 (28%), Gaps = 47/284 (16%)
Query: 74 TNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGH---STDDLYV 130
+ + Y+ W + PR+ A VG ++ GG + + L
Sbjct: 38 LSYLEAYNPSNGTWL---RLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDC 94
Query: 131 LDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKP 190
+ ++ W PR + V ++ +V G+ G + + +
Sbjct: 95 YNPMTNQ--WSPCAPMSV---PRNRIGV-GVIDGHIYAVGGSHGCIHHNSVERYEPERD- 147
Query: 191 YVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGA-PLADAYGLLMHRNGQWEWT 249
W + P + R+ + + + GG D + A+ Y +W
Sbjct: 148 -EWHLVAP---MLTRRIGVGVAV-LNRLLYAVGGFDGTNRLNSAECY---YPERNEWR-M 198
Query: 250 LAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTS 309
+ + R + ++ GG + +V D W
Sbjct: 199 ITA--MNTIRSGAGVCVLHNCIYAAGGYDGQDQL----NSVERYDVETETW--------- 243
Query: 310 SRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLD 353
+ RR RIY+ GG G LD
Sbjct: 244 --------TFVAPM-KHRRSALGITVHQGRIYVLGGYDGHTFLD 278
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Length = 308 | Back alignment and structure |
|---|
Score = 67.4 bits (165), Expect = 3e-12
Identities = 61/298 (20%), Positives = 90/298 (30%), Gaps = 57/298 (19%)
Query: 14 RTLETY------WDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPG 67
LE Y W D PR G V G L GG G T S
Sbjct: 39 SYLEAYNPSNGTWLRLADLQVPRSGLAGCVV------GGLLYAVGGRNNSPDGNTDS--- 89
Query: 68 IRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTD 126
+++ Y+ +T +W+ P PR + G + G G H++
Sbjct: 90 -------SALDCYNPMTNQWSPCAPM---SVPRNRIGVGVIDGHIYAVGGSHGCIHHNSV 139
Query: 127 DLYVLDLTNDKFKWHRVVVQGQGPGPRYGH---VMDLVSQRYLVSVSGNDGKRVLSDAWA 183
+ Y + D+ WH V R G V++ R L +V G DG L+ A
Sbjct: 140 ERY--EPERDE--WHLV---APMLTRRIGVGVAVLN----RLLYAVGGFDGTNRLNSAEC 188
Query: 184 LDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGA-PLADAYGLLMHR 242
+ W+ + + R A GG D + Y +
Sbjct: 189 YYPERN--EWRMITA---MNTIRSGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDV---E 239
Query: 243 NGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVW 300
W +AP R R++V GG G + +V D W
Sbjct: 240 TETWT-FVAP--MKHRRSALGITVHQGRIYVLGG-YDGHTFL---DSVECYDPDTDTW 290
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Length = 308 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 3e-10
Identities = 45/268 (16%), Positives = 62/268 (23%), Gaps = 48/268 (17%)
Query: 91 RPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGP 150
PR +HA + GG S L + +N W R+
Sbjct: 7 HHHSSGLVPRGSHAPKVGRLIYTA-GGYF--RQSLSYLEAYNPSNGT--WLRL---ADLQ 58
Query: 151 GPRYGHVMDLVSQR-YLV--SVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARM 207
PR G +V Y V + DG S + W P R
Sbjct: 59 VPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTN--QWSPCAPM---SVPRN 113
Query: 208 YATASARSDGMFLLCGGRDASGAPLADA--YGLLMHRNGQWEWTLAPGVAPSPRYQHAAV 265
DG GG Y +W +AP + R
Sbjct: 114 RIGVGV-IDGHIYAVGGSHGCI-HHNSVERYE---PERDEWH-LVAP--MLTRRIGVGVA 165
Query: 266 FVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLEL 325
+ L+ GG R + W + T
Sbjct: 166 VLNRLLYAVGGFDGTNRL----NSAECYYPERNEWRMITAMNT----------------- 204
Query: 326 MRRCRHASASIGVRIYIYGGLKGDILLD 353
R + IY GG G L+
Sbjct: 205 -IRSGAGVCVLHNCIYAAGGYDGQDQLN 231
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} Length = 262 | Back alignment and structure |
|---|
Score = 67.8 bits (166), Expect = 1e-12
Identities = 31/153 (20%), Positives = 54/153 (35%), Gaps = 24/153 (15%)
Query: 568 QIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYL-FLGDYVDR 626
Q + T+ + V + GD+HG L L F + D L +GD V++
Sbjct: 6 QGYANVVTLPNVTGRVIIVGDIHGCRAQLEDLLRAVSFKQGS------DTLVAVGDLVNK 59
Query: 627 GQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRF 686
G S + LL L + + GNH+A + + + E + D +
Sbjct: 60 GPDSFGVVRLLKRL------GAYSVLGNHDAKLLKLVKKLGKK--ECLKGRDAKSSLAPL 111
Query: 687 NQ--------LFNCLPLAA-LIEKKIICMHGGI 710
Q + LP + ++ H G+
Sbjct: 112 AQSIPTDVETYLSQLPHIIRIPAHNVMVAHAGL 144
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 69.5 bits (169), Expect = 3e-12
Identities = 78/534 (14%), Positives = 156/534 (29%), Gaps = 151/534 (28%)
Query: 303 RNGLVTSSRT-SKGH-GEHDPSLELMRRCRHASASIGVRIYIYGGLKG---DIL----LD 353
R+ L ++ +K + P L+L + + V I G+ G +
Sbjct: 116 RDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLID---GVLGSGKTWVALDVCL 172
Query: 354 DFLVAENSPFQ------SDVNSPLLTSERAPTHTGSKVNQTNLGYVTTPTPDGLHSPSFG 407
+ V F+ + NSP E L Y P S
Sbjct: 173 SYKVQCKMDFKIFWLNLKNCNSPETVLE----------MLQKLLYQIDPNWTSRSDHSS- 221
Query: 408 SLSMDKNSM-EKLREASAAEAEAANA------VWQAAQAASAVPPEETSVSDDNSQVAEA 460
++ + +S+ +LR N V N++ A
Sbjct: 222 NIKLRIHSIQAELRRL-LKSKPYENCLLVLLNVQ-------------------NAKAWNA 261
Query: 461 ----------TSDGSDTEADVRLHPRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMIPL 510
T T+ + + ++ L+ +E + + L
Sbjct: 262 FNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMT--------LT----PDEVKSL--L 307
Query: 511 NNELSYPTKKFTRQ---RSPQGLHKKIISTLLRPR-----NWKAPANRRF------FLDS 556
L + R+ +P II+ +R NWK + L+
Sbjct: 308 LKYLDCRPQDLPREVLTTNP--RRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNV 365
Query: 557 YEVGEL--CYAAEQIFMQEPTVLQLRAPVKVFGDL--HGQFGDLMRLFDEYGFPSTAGDI 612
E E + +F + P + + D+M + ++
Sbjct: 366 LEPAEYRKMFDRLSVFPPSAHI-----PTILLSLIWFDVIKSDVMVVVNKL--------- 411
Query: 613 TYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVH--LIR--GNHEAADINAL----- 663
Y + S+ +I L L +K+E +H ++ + D + L
Sbjct: 412 --HKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYL 469
Query: 664 -------FGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGI-----G 711
G L+ IE T F +F L +E+KI H G
Sbjct: 470 DQYFYSHIGHHLKNIEHPER------MTLFRMVF--LDFR-FLEQKIR--HDSTAWNASG 518
Query: 712 RSIHSVEQIEKLERPITMDAG--SIILMDLLWFVLNIST-ILRSMVLYIILFSL 762
+++++Q++ + I + ++ +L F+ I ++ S ++ +L
Sbjct: 519 SILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIAL 572
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 Length = 221 | Back alignment and structure |
|---|
Score = 63.3 bits (154), Expect = 2e-11
Identities = 35/140 (25%), Positives = 55/140 (39%), Gaps = 28/140 (20%)
Query: 585 VFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEY 644
V GDLHG + +LM D GF + D+ + +GD VDRG ++E + L+
Sbjct: 17 VVGDLHGCYTNLMNKLDTIGFDN-KKDL----LISVGDLVDRGAENVECLELITFP---- 67
Query: 645 PENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWT--------------RFNQLF 690
+RGNHE I+ L + N G W + + ++L
Sbjct: 68 --WFRAVRGNHEQMMIDGLSE--RGNVNHWLLNGGGWFFNLDYDKEILAKALAHKADELP 123
Query: 691 NCLPLAALIEKKIICMHGGI 710
+ L +KK + H
Sbjct: 124 LIIEL-VSKDKKYVICHADY 142
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Length = 318 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 2e-11
Identities = 35/206 (16%), Positives = 64/206 (31%), Gaps = 27/206 (13%)
Query: 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLT 134
+SV YD + KW+ ++ P H + M+ GG T+ +++ +
Sbjct: 127 DSVLCYDPVAAKWSEVKN---LPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPK 183
Query: 135 NDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQ 194
W + PR + + + +V G + + A D W+
Sbjct: 184 KGD--WKDLA---PMKTPRSMFGV-AIHKGKIVIAGGVTEDGLSASVEAFDLKTN--KWE 235
Query: 195 RLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRN-------GQWE 247
+ + P R + + G GG L N + E
Sbjct: 236 VM---TEFPQERSSISLVS-LAGSLYAIGGFA--MIQLESKEFAPTEVNDIWKYEDDKKE 289
Query: 248 WTLAPGVAPSPRYQHAAVFVGARLHV 273
W G+ RY A + RL++
Sbjct: 290 WA---GMLKEIRYASGASCLATRLNL 312
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Length = 318 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 3e-11
Identities = 52/331 (15%), Positives = 100/331 (30%), Gaps = 61/331 (18%)
Query: 20 WDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHL 79
+ T PR ++ ++ + GG E + +
Sbjct: 37 YLTALAEQIPRNHSSIVTQ------QNQVYVVGGLYVDEENKDQP--------LQSYFFQ 82
Query: 80 YDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKF 138
D ++ +W + P PS R V + V G S D + D K
Sbjct: 83 LDNVSSEWVGLPP---LPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAK- 138
Query: 139 KWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSG--NDGKRVLSDAWALDTAQKPYVWQRL 196
W V P YGH ++S ++ G D K+ + + + + W+ L
Sbjct: 139 -WSEV---KNLPIKVYGHN--VISHNGMIYCLGGKTDDKKCTNRVFIYNPKKG--DWKDL 190
Query: 197 NPEGDRPSARMYATASARSDGMFLLCGGRDASGA-PLADAYGLLMHRNGQWEWTLAPGVA 255
P + R + + + GG G +A+ L + +WE +
Sbjct: 191 AP---MKTPRSMFGVAIHKGKIVI-AGGVTEDGLSASVEAFDL---KTNKWE-VMTE--F 240
Query: 256 PSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVW---LDRNGLVTSSRT 312
P R + V + L+ GG + E A ++ +W D+ +
Sbjct: 241 PQERSSISLVSLAGSLYAIGG-FAMIQLESKEFAPTEVND---IWKYEDDKKEWAGMLK- 295
Query: 313 SKGHGEHDPSLELMRRCRHASASIGVRIYIY 343
R ++ + R+ ++
Sbjct: 296 -------------EIRYASGASCLATRLNLF 313
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Length = 318 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 7e-10
Identities = 47/295 (15%), Positives = 77/295 (26%), Gaps = 73/295 (24%)
Query: 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDD-----LY 129
+ YD + + A PR + V GG+ + D +
Sbjct: 24 TAAVAYDPMENECYLTALA--EQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFF 81
Query: 130 VLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGK------RVLSDAWA 183
LD + + W + L S R L + D K + L +
Sbjct: 82 QLDNVSSE--WVGLP--------------PLPSARCLFGLGEVDDKIYVVAGKDLQTEAS 125
Query: 184 LDTAQKPYVWQRLNPEGDR-------PSARMYATASARSDGMFLLCGGRDASGAPLADA- 235
LD+ +P + P + +GM GG+
Sbjct: 126 LDSVL------CYDPVAAKWSEVKNLPIKVYGHNVISH-NGMIYCLGGKTDDKKCTNRVF 178
Query: 236 -YGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLD 294
Y + G W+ LAP +PR ++ + GG + A+V D
Sbjct: 179 IYN---PKKGDWK-DLAP--MKTPRSMFGVAIHKGKIVIAGG--VTEDGLS--ASVEAFD 228
Query: 295 TAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGD 349
W E R + S+ +Y GG
Sbjct: 229 LKTNKW-----------------EVMTEF-PQERSSISLVSLAGSLYAIGGFAMI 265
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} Length = 280 | Back alignment and structure |
|---|
Score = 64.0 bits (155), Expect = 3e-11
Identities = 30/144 (20%), Positives = 54/144 (37%), Gaps = 14/144 (9%)
Query: 585 VFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYL-FLGDYVDRGQHSLETITLLLALKIE 643
+ GD+HG + +L+ L + F D L GD V RG SL+ + + +L
Sbjct: 5 LIGDVHGCYDELIALLHKVEFTPGK------DTLWLTGDLVARGPGSLDVLRYVKSLG-- 56
Query: 644 YPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWA--WTRFNQLFNCLPLAALIEK 701
++V L+ GNH+ + G + + A PL + E+
Sbjct: 57 --DSVRLVLGNHDLHLLAVFAGIS-RNKPKDRLTPLLEAPDADELLNWLRRQPLLQIDEE 113
Query: 702 KIICMHGGIGRSIHSVEQIEKLER 725
K + M ++ ++ R
Sbjct: 114 KKLVMAHAGITPQWDLQTAKECAR 137
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Length = 302 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 8e-10
Identities = 46/261 (17%), Positives = 77/261 (29%), Gaps = 48/261 (18%)
Query: 98 SPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGH- 156
S R ++ G G A + + D ++ WH+V + P R
Sbjct: 3 SVRTRLRTPMNLPKLMVVVG-GQAPKAIRSVECYDFKEER--WHQV---AELPSRRCRAG 56
Query: 157 --VMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASAR 214
M + +V G +G + + D + W + R A+
Sbjct: 57 MVYMA----GLVFAVGGFNGSLRVRTVDSYDPVKD--QWTSVAN---MRDRRSTLGAAV- 106
Query: 215 SDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAP--SPRYQHAAVFVGARLH 272
+G+ GG D S L+ + N EW VAP + R VG L+
Sbjct: 107 LNGLLYAVGGFDGST-GLSSVEAYNIKSN---EWFH---VAPMNTRRSSVGVGVVGGLLY 159
Query: 273 VTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHA 332
GG + + + V + W + T RR
Sbjct: 160 AVGG--YDVASRQCLSTVECYNATTNEWT----YIAEMST--------------RRSGAG 199
Query: 333 SASIGVRIYIYGGLKGDILLD 353
+ +Y GG G ++
Sbjct: 200 VGVLNNLLYAVGGHDGPLVRK 220
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Length = 302 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 2e-08
Identities = 57/347 (16%), Positives = 96/347 (27%), Gaps = 90/347 (25%)
Query: 12 SYRTLETY------WDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSA 65
+ R++E Y W + P RC + + + GG G+
Sbjct: 28 AIRSVECYDFKEERWHQVAELPSRRCRAGMVYM------AGLVFAVGG----FNGSLRV- 76
Query: 66 PGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHS 124
+V YD + +WT + R+ AA + G + G G G S
Sbjct: 77 ---------RTVDSYDPVKDQWTSVAN---MRDRRSTLGAAVLNGLLYAVGGFDGSTGLS 124
Query: 125 TDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGH---VMDLVSQRYLVSVSGNDGKRVLSDA 181
+ + Y ++ ++ +W V R V+ L +V G D +
Sbjct: 125 SVEAY--NIKSN--EWFHV---APMNTRRSSVGVGVVG----GLLYAVGGYDV----ASR 169
Query: 182 WALDTAQKPYVWQRLNPEGDR-------PSARMYATASARSDGMFLLCGGRDASGA-PLA 233
L T + N + + R A ++ ++ GG D
Sbjct: 170 QCLSTV------ECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLY-AVGGHDGPLVRKSV 222
Query: 234 DAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVL 293
+ Y W +A R V L+V GG G + A+V
Sbjct: 223 EVYDP---TTNAWR-QVAD--MNMCRRNAGVCAVNGLLYVVGG-DDGSCNL---ASVEYY 272
Query: 294 DTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRI 340
+ W S R I R+
Sbjct: 273 NPTTDKW-----------------TVVSSCMSTGRSYAGVTVIDKRL 302
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A Length = 252 | Back alignment and structure |
|---|
Score = 48.6 bits (115), Expect = 3e-06
Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 6/104 (5%)
Query: 585 VFGDLHGQFGDLMRLFDEYGFPSTAGDITYID-YLFLGDYVDRGQHSLETITLLLALKIE 643
V ++ G L + I+ Y LG+ V + E I ++ L +
Sbjct: 6 VLANIAGNLPALTAALSR--IEEMREEGYEIEKYYILGNIVGLFPYPKEVIEVIKDLTKK 63
Query: 644 YPENVHLIRGNHEAADINALF-GFRLECIERMGENDGIWAWTRF 686
ENV +IRG ++ + I+++ + +F
Sbjct: 64 --ENVKIIRGKYDQIIAMSDPHATDPGYIDKLELPGHVKKALKF 105
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Length = 656 | Back alignment and structure |
|---|
Score = 45.7 bits (107), Expect = 5e-05
Identities = 43/279 (15%), Positives = 74/279 (26%), Gaps = 38/279 (13%)
Query: 20 WDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHL 79
W D R + + G GG+ S + +
Sbjct: 277 WIPGPDMQVARGYQSSA------------TMSDGRVFTIGGSWSGGVF------EKNGEV 318
Query: 80 YDVLTRKWTRIRPAGEPPSPRAAHAA--AAVGTMVVFQGGIG---PAGHSTDDLYVLDLT 134
Y ++ WT + A P A + +F G AG ST +
Sbjct: 319 YSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSG 378
Query: 135 NDKFK--WHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWAL-------D 185
+ K R +G P G+ + + + + G SDA +
Sbjct: 379 SGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGE 438
Query: 186 TAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGL--LMHRN 243
P AR + T+ DG + GG+ ++
Sbjct: 439 PGTSPNTVFAS---NGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVP 495
Query: 244 GQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGG 281
Q + + Y ++ + R+ GG L G
Sbjct: 496 EQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGD 534
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} Length = 246 | Back alignment and structure |
|---|
Score = 44.7 bits (105), Expect = 5e-05
Identities = 29/131 (22%), Positives = 41/131 (31%), Gaps = 25/131 (19%)
Query: 585 VFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEY 644
+ D+H L + + AG + I LGD V G E + L+ L
Sbjct: 8 IISDVHANLVALEAVLSD------AGRVDDI--WSLGDIVGYGPRPRECVELVRVLA--- 56
Query: 645 PENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFN------QLFNCLPLAAL 698
+ GNH+ A RL E WT Q LP +
Sbjct: 57 --PNISVIGNHDWA-----CIGRLSLDEFNPVARFASYWTTMQLQAEHLQYLESLPN-RM 108
Query: 699 IEKKIICMHGG 709
I+ +HG
Sbjct: 109 IDGDWTVVHGS 119
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 769 | |||
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 100.0 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 100.0 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 100.0 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 100.0 | |
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 100.0 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 100.0 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 100.0 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 100.0 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 100.0 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 100.0 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 100.0 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 100.0 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 100.0 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 100.0 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 100.0 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 100.0 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 100.0 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 100.0 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 100.0 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 100.0 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 100.0 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 100.0 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 99.98 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 99.96 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 99.96 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 99.92 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 99.91 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 99.9 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 99.85 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 99.73 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 99.31 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 99.31 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 99.23 | |
| 1su1_A | 208 | Hypothetical protein YFCE; structural genomics, ph | 98.68 | |
| 2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A ho | 98.39 | |
| 2a22_A | 215 | Vacuolar protein sorting 29; alpha-beta-BETA-alpha | 98.17 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 98.12 | |
| 1s3l_A | 190 | Hypothetical protein MJ0936; phosphodiesterase, nu | 98.12 | |
| 3ck2_A | 176 | Conserved uncharacterized protein (predicted phosp | 98.01 | |
| 1z2w_A | 192 | Vacuolar protein sorting 29; VPS29, retromer, phos | 98.0 | |
| 1xm7_A | 195 | Hypothetical protein AQ_1665; structural genomics, | 97.97 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 97.87 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 97.45 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 97.41 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 97.27 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 97.24 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 97.23 | |
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 97.19 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 97.03 | |
| 2q8u_A | 336 | Exonuclease, putative; structural genomics, joint | 96.96 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 96.91 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 96.83 | |
| 1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 96.77 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 96.47 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 96.33 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 96.29 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 96.17 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 95.85 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 95.76 | |
| 4fbk_A | 472 | DNA repair and telomere maintenance protein NBS1, | 95.73 | |
| 3t1i_A | 431 | Double-strand break repair protein MRE11A; DNA rep | 95.68 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 95.68 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 95.59 | |
| 4fbw_A | 417 | DNA repair protein RAD32; DNA double-strand break | 95.56 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 95.55 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 95.23 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 95.13 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 95.04 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 94.96 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 94.58 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 94.32 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 94.18 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 94.04 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 93.96 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 93.93 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 93.58 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 93.52 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 93.43 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 93.15 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 93.12 | |
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 93.12 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 93.07 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 93.06 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 92.83 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 92.48 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 92.46 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 92.42 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 92.33 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 92.26 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 92.1 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 91.91 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 91.67 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 91.66 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 91.61 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 91.48 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 91.35 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 91.03 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 90.57 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 90.12 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 90.05 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 89.91 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 89.84 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 89.83 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 89.58 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 89.46 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 88.42 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 88.37 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 88.36 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 88.18 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 88.17 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 87.69 | |
| 3qfk_A | 527 | Uncharacterized protein; structural genomics, cent | 87.33 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 87.05 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 86.96 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 86.95 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 86.75 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 86.71 | |
| 1hp1_A | 516 | 5'-nucleotidase; metallophosphatase, dinuclear, me | 86.6 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 86.55 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 85.98 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 85.55 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 85.36 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 85.34 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 85.2 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 85.09 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 84.95 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 84.64 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 84.38 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 84.25 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 83.76 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 83.73 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 83.4 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 83.24 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 82.99 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 82.97 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 82.56 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 82.08 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 82.08 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 81.97 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 81.88 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 81.83 | |
| 3ott_A | 758 | Two-component system sensor histidine kinase; beta | 81.8 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 81.74 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 81.64 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 81.27 | |
| 4h2g_A | 546 | 5'-nucleotidase; dimer, hydrolase, phosphatase, ex | 81.05 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 80.71 | |
| 1itv_A | 195 | MMP9; adaptive molecular recognition, beta propell | 80.59 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 80.5 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 80.26 | |
| 2z1a_A | 552 | 5'-nucleotidase; metal-binding, nucleotide-binding | 80.04 | |
| 1qhu_A | 460 | Protein (hemopexin); beta propeller, HAEM binding | 80.01 |
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-47 Score=401.32 Aligned_cols=225 Identities=44% Similarity=0.802 Sum_probs=207.1
Q ss_pred HHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecCCEEEEccCCCCHHHHHHHHHHhCCCCCCC
Q 004198 531 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG 610 (769)
Q Consensus 531 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~ 610 (769)
++.+|++|++.+.+++. ..+.++++++..||++|+++|++||+++++..|++||||||||+.+|+++|+..++++.+
T Consensus 8 ~d~~i~~l~~~~~~~~~--~~~~l~~~~~~~l~~~~~~il~~ep~ll~~~~~i~viGDIHG~~~~L~~ll~~~g~~~~~- 84 (299)
T 3e7a_A 8 LDSIIGRLLEVQGSRPG--KNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES- 84 (299)
T ss_dssp HHHHHHHHHTTTTSCTT--CCCCCCHHHHHHHHHHHHHHHHHSCSEEEECSSEEEECBCTTCHHHHHHHHHHHCSTTSS-
T ss_pred HHHHHHHHHhccccCCC--cccCCCHHHHHHHHHHHHHHHHhCCCeeecCCCEEEEecCCCCHHHHHHHHHHhCCCCCc-
Confidence 68999999998776553 345689999999999999999999999999999999999999999999999999998766
Q ss_pred CCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCCCchhhhHHHhHhh
Q 004198 611 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF 690 (769)
Q Consensus 611 ~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~f 690 (769)
+|||||||||||++|+||+.+|++||+++|.++++||||||.+.++..|||++||..+| +..+|+.+.++|
T Consensus 85 -----~~vfLGD~VDrG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~i~~~ygF~~e~~~ky----~~~l~~~~~~~f 155 (299)
T 3e7a_A 85 -----NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY----NIKLWKTFTDCF 155 (299)
T ss_dssp -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHHSHHHHHHHHS----CHHHHHHHHHHH
T ss_pred -----cEEeCCcccCCCCCcHHHHHHHHHHHhhCCCcEEEEecCchhhhhcccccchHHHHHHh----hHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999 357999999999
Q ss_pred ccccceEEEeceEEEEcCCCCCCCCChHHhhhccCCcccCCCccceeceeccCCCCC--cccccCcceEEeehhhhhhhc
Q 004198 691 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWFVLNIS--TILRSMVLYIILFSLKIFISF 768 (769)
Q Consensus 691 ~~lP~~~~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~~--~~~~~~~~~~~~~~~~~~~~~ 768 (769)
++||+++++++++||||||++|.+.++++|+.+.||.+++..+ +++|||||||..+ .+..+.++.++.||.+...+|
T Consensus 156 ~~LPlaaii~~~il~vHGGlsp~~~~l~~i~~i~R~~~~p~~~-~~~dllWsDP~~~~~~~~~~~RG~~~~fG~~~~~~f 234 (299)
T 3e7a_A 156 NCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQG-LLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKF 234 (299)
T ss_dssp TTCCCEEEETTTEEEESSCCCTTCCCTHHHHTCCSSCCCCSSS-HHHHHHHCEECTTCSSEEECTTSSSEEECHHHHHHH
T ss_pred hhCCceEEECCeEEEEcCccCcccCCHHHHHhccCCCcCCcch-hhhhhhcCCccccccCcccCCCCcceeeCHHHHHHH
Confidence 9999999999999999999999999999999999999988776 8999999999853 455566677789999988776
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-46 Score=394.30 Aligned_cols=217 Identities=35% Similarity=0.604 Sum_probs=199.7
Q ss_pred HHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecCCEEEEccCCCCHHHHHHHHHHhCCCCCCC
Q 004198 531 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG 610 (769)
Q Consensus 531 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~ 610 (769)
++.+++.+.+.+ .|+++++.+||++|++||++||+++++..|++||||||||+.+|+++|+..+.++.+
T Consensus 30 ~~~~~~~~~~~~----------~l~~~~~~~l~~~~~~il~~ep~ll~~~~pi~ViGDIHG~~~dL~~ll~~~g~~~~~- 98 (357)
T 3ll8_A 30 VDILKAHLMKEG----------RLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT- 98 (357)
T ss_dssp HHHHHHHHHTTC----------CBCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTC-
T ss_pred HHHHHHHHHhCC----------CCCHHHHHHHHHHHHHHHHhCCCeEEecccceeeccCCCCHHHHHHHHHhcCCCCCc-
Confidence 578888888764 478999999999999999999999999999999999999999999999999988766
Q ss_pred CCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCCCchhhhHHHhHhh
Q 004198 611 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF 690 (769)
Q Consensus 611 ~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~f 690 (769)
+|||||||||||++|+||+.+|++||++||+++++||||||.+.++..|||++||..+|+ ..+|+.+.++|
T Consensus 99 -----~~vfLGD~VDRG~~s~Evl~lL~~lk~~~p~~v~llrGNHE~~~i~~~ygF~~E~~~ky~----~~l~~~~~~~f 169 (357)
T 3ll8_A 99 -----RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS----ERVYDACMDAF 169 (357)
T ss_dssp -----CEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHSSHHHHHHHHSC----HHHHHHHHHHH
T ss_pred -----EEEECCCccCCCcChHHHHHHHHHhhhhcCCcEEEEeCchhhhhhhcccCchhhhhhccc----hhHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999993 57999999999
Q ss_pred ccccceEEEeceEEEEcCCCCCCCCChHHhhhccCCcccCCCccceeceeccCCCCCcc-------c--ccCcceEEeeh
Q 004198 691 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWFVLNISTI-------L--RSMVLYIILFS 761 (769)
Q Consensus 691 ~~lP~~~~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~~~~-------~--~~~~~~~~~~~ 761 (769)
++||++++++++++|||||++|.+.++++|+.++||.+++..+ +++|||||||.+... + .+.++.++.||
T Consensus 170 ~~LPlaaii~~~il~vHGGlsp~l~~ld~I~~i~R~~e~p~~g-~~~DlLWSDP~~~~~~~~~~~~~~~~s~RG~g~~FG 248 (357)
T 3ll8_A 170 DCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG-PMCDILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYS 248 (357)
T ss_dssp HTSCSEEEETTTEEECSSCCCTTCCSHHHHHTCCCSSCCCSSS-HHHHHHHCEECTTTTSCSCCCSEEECTTTTSSEEEC
T ss_pred HhCCcceEEcccEEEEecCcCcccCCHHHHhhccccccCCccC-chhHhhccCccccccccccccccccCCCCCCceEEC
Confidence 9999999999999999999999999999999999999988777 799999999986532 1 24566778899
Q ss_pred hhhhhhc
Q 004198 762 LKIFISF 768 (769)
Q Consensus 762 ~~~~~~~ 768 (769)
.++..+|
T Consensus 249 ~~~~~~F 255 (357)
T 3ll8_A 249 YPAVCEF 255 (357)
T ss_dssp HHHHHHH
T ss_pred hHHHHHH
Confidence 9988776
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-44 Score=380.61 Aligned_cols=222 Identities=29% Similarity=0.503 Sum_probs=202.0
Q ss_pred cchHHHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecCC----EEEEccCCCCHHHHHHHHHH
Q 004198 527 PQGLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAP----VKVFGDLHGQFGDLMRLFDE 602 (769)
Q Consensus 527 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~----i~viGDiHG~~~~l~~~l~~ 602 (769)
..++++++|+.+.+.+ .|+++++.+||.+|+++|++||++++++.| ++||||||||+.+|+++|+.
T Consensus 12 ~~~~~~~~~~~~~~~~----------~l~~~~~~~l~~~~~~il~~ep~l~~l~~p~~~ri~viGDIHG~~~~L~~ll~~ 81 (315)
T 3h63_A 12 TISFMKELMQWYKDQK----------KLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFEL 81 (315)
T ss_dssp CHHHHHHHHHHHHTTC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECCCTTCEEEEECCCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHHhCCCeEEEecCCCceEEEEecCCCCHHHHHHHHHH
Confidence 4456789999988763 478999999999999999999999999988 99999999999999999999
Q ss_pred hCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCCCchhh
Q 004198 603 YGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWA 682 (769)
Q Consensus 603 ~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~ 682 (769)
.++++... .|||||||||||++|+||+.+|++||+++|.++++||||||.+.++..|||.+||..+|+ ..+
T Consensus 82 ~g~~~~~~-----~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~ygf~~e~~~k~~----~~l 152 (315)
T 3h63_A 82 NGLPSETN-----PYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYT----AQM 152 (315)
T ss_dssp HCCCBTTB-----CEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHHHHHHHHSC----HHH
T ss_pred hCCCCCCC-----EEEEeCCccCCCcChHHHHHHHHHhhhhcCCcEEEEecCcccccccccccccHHHHHHhh----hHH
Confidence 99887652 599999999999999999999999999999999999999999999999999999999994 579
Q ss_pred hHHHhHhhccccceEEEeceEEEEcCCC-CCCCCChHHhhhccCCcccCCCccceeceeccCCCCC-cccccCcceEEee
Q 004198 683 WTRFNQLFNCLPLAALIEKKIICMHGGI-GRSIHSVEQIEKLERPITMDAGSIILMDLLWFVLNIS-TILRSMVLYIILF 760 (769)
Q Consensus 683 ~~~~~~~f~~lP~~~~i~~~i~~vHgGi-~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~~-~~~~~~~~~~~~~ 760 (769)
|+.+.++|++||++++++++++|||||+ +|.+.++++|+.++||.+++.++ +++|||||||.+. .+..+.++-++.|
T Consensus 153 ~~~~~~~f~~LPla~ii~~~il~vHGGl~sp~~~~l~~i~~i~R~~~~p~~g-~~~dllWsDP~~~~g~~~s~RG~g~~f 231 (315)
T 3h63_A 153 YELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSG-PMCDLLWSDPQPQNGRSISKRGVSCQF 231 (315)
T ss_dssp HHHHHHHHTTSCSEEEETTTEEECSSCCCSSTTCCHHHHHHCCCSSCCCSSS-HHHHHHHCEECSSSSEEECTTSSSEEE
T ss_pred HHHHHHHHhcCCcEEEEcCCEEEeCCCCCCcccCCHHHHHhCcccccccccc-hhhhheecCCCCCCCcCcCCCCceEEE
Confidence 9999999999999999999999999999 78899999999999999988776 8999999999864 3445666677889
Q ss_pred hhhhhhhc
Q 004198 761 SLKIFISF 768 (769)
Q Consensus 761 ~~~~~~~~ 768 (769)
|.++..+|
T Consensus 232 g~~~~~~f 239 (315)
T 3h63_A 232 GPDVTKAF 239 (315)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 99988776
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-44 Score=384.23 Aligned_cols=222 Identities=32% Similarity=0.544 Sum_probs=199.8
Q ss_pred cchHHHHHH-HHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecCC------EEEEccCCCCHHHHHHH
Q 004198 527 PQGLHKKII-STLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAP------VKVFGDLHGQFGDLMRL 599 (769)
Q Consensus 527 ~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~------i~viGDiHG~~~~l~~~ 599 (769)
..++++++| +.|.+.+ .|+++++..||++|+++|++||+++++..| ++||||||||+.+|+++
T Consensus 13 ~~~~~~~~i~~~~~~~~----------~l~~~~~~~l~~~~~~il~~ep~~~~l~~p~~~~~ri~viGDIHG~~~~L~~l 82 (335)
T 3icf_A 13 SQEFISKMVNDLFLKGK----------YLPKKYVAAIISHADTLFRQEPSMVELENNSTPDVKISVCGDTHGQFYDVLNL 82 (335)
T ss_dssp CHHHHHHHHHHTGGGTC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECCSSSTTCEEEEECCCTTCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHHhCCCeEEecCCcccCceEEEEecCCCCHHHHHHH
Confidence 556678888 6665542 588999999999999999999999999999 99999999999999999
Q ss_pred HHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCCCc
Q 004198 600 FDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDG 679 (769)
Q Consensus 600 l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~~~ 679 (769)
|+..++++... +|||||||||||++|+||+.+|++||+++|.++++||||||.+.++..|||.+||..+|+
T Consensus 83 l~~~g~~~~~~-----~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~i~~~ygf~~e~~~k~~---- 153 (335)
T 3icf_A 83 FRKFGKVGPKH-----TYLFNGDFVDRGSWSCEVALLFYCLKILHPNNFFLNRGNHESDNMNKIYGFEDECKYKYS---- 153 (335)
T ss_dssp HHHHCCCBTTE-----EEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHHSHHHHHHHHSC----
T ss_pred HHHcCCCCCCc-----EEEEeCCccCCCcChHHHHHHHHHHhhhCCCcEEEecCchhhhhhhhccccchHhHhhcc----
Confidence 99999886541 699999999999999999999999999999999999999999999999999999999994
Q ss_pred hhhhHHHhHhhccccceEEEeceEEEEcCCC-CCCCCChHHhhhccCCcccCCCccceeceeccCCCCC-cccccCcceE
Q 004198 680 IWAWTRFNQLFNCLPLAALIEKKIICMHGGI-GRSIHSVEQIEKLERPITMDAGSIILMDLLWFVLNIS-TILRSMVLYI 757 (769)
Q Consensus 680 ~~~~~~~~~~f~~lP~~~~i~~~i~~vHgGi-~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~~-~~~~~~~~~~ 757 (769)
..+|+.+.++|++||+++++++++||||||+ +|.+.++++|+.+.||.+++.++ +++|||||||.+. .+..+.++.+
T Consensus 154 ~~l~~~~~~~f~~LPlaaii~~~il~vHGGl~sp~~~~ld~i~~i~R~~~~p~~g-~~~dlLWSDP~~~~g~~~s~RG~g 232 (335)
T 3icf_A 154 QRIFNMFAQSFESLPLATLINNDYLVMHGGLPSDPSATLSDFKNIDRFAQPPRDG-AFMELLWADPQEANGMGPSQRGLG 232 (335)
T ss_dssp HHHHHHHHHHHTTSCSEEEETTTEEECSSCCCSCTTCCHHHHHTCCCSSCCCSSS-HHHHHHHCEECSSSSEEECCCC--
T ss_pred HHHHHHHHHHHhhcceeEEEcCcEEEecCCcCCCccCCHHHHHhCcccccccccc-chhhhhccCCCCcCCcccCCCCCc
Confidence 5799999999999999999999999999999 89999999999999999888776 8999999999864 4455667777
Q ss_pred Eeehhhhhhhc
Q 004198 758 ILFSLKIFISF 768 (769)
Q Consensus 758 ~~~~~~~~~~~ 768 (769)
+.||.++..+|
T Consensus 233 ~~FG~~~~~~f 243 (335)
T 3icf_A 233 HAFGPDITDRF 243 (335)
T ss_dssp EEECHHHHHHH
T ss_pred eeeCHHHHHHH
Confidence 89999988776
|
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-44 Score=380.61 Aligned_cols=225 Identities=44% Similarity=0.802 Sum_probs=203.1
Q ss_pred HHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecCCEEEEccCCCCHHHHHHHHHHhCCCCCCC
Q 004198 531 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG 610 (769)
Q Consensus 531 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~ 610 (769)
++++|+.|++.+.+++. ....|+++++..||++|+++|++||+++++..|++||||||||+.+|+++|+..++++.+
T Consensus 9 ~d~~i~~l~~~~~~~~~--~~~~l~~~~~~~l~~~~~~il~~e~~l~~~~~~i~viGDIHG~~~~L~~ll~~~g~~~~~- 85 (330)
T 1fjm_A 9 LDSIIGRLLEVQGSRPG--KNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES- 85 (330)
T ss_dssp HHHHHHHHHHTTTTCTT--CCCCCCHHHHHHHHHHHHHHHHHSCSEEEECSSEEEECBCTTCHHHHHHHHHHHCSTTSS-
T ss_pred HHHHHHHHHhccccCCc--ccCCCCHHHHHHHHHHHHHHHHhCCCeEeecCceEEecCCCCCHHHHHHHHHHhCCCCcc-
Confidence 67889999987655432 234689999999999999999999999999999999999999999999999999998765
Q ss_pred CCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCCCchhhhHHHhHhh
Q 004198 611 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF 690 (769)
Q Consensus 611 ~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~f 690 (769)
+|||||||||||++|+|||.+|++||+.||.++++||||||.+.++..|||.+||..+|+ ..+|+.+.++|
T Consensus 86 -----~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~~gf~~e~~~~y~----~~l~~~~~~~f 156 (330)
T 1fjm_A 86 -----NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN----IKLWKTFTDCF 156 (330)
T ss_dssp -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHHSHHHHHHHHSC----HHHHHHHHHHH
T ss_pred -----eEEeCCCcCCCCCChHHHHHHHHHhhhhcCCceEEecCCchHhhhhhhhhhhhhhhhhcc----HHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999984 46899999999
Q ss_pred ccccceEEEeceEEEEcCCCCCCCCChHHhhhccCCcccCCCccceeceeccCCCCC--cccccCcceEEeehhhhhhhc
Q 004198 691 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWFVLNIS--TILRSMVLYIILFSLKIFISF 768 (769)
Q Consensus 691 ~~lP~~~~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~~--~~~~~~~~~~~~~~~~~~~~~ 768 (769)
++||++++++++++|||||++|.+.+++||+.+.||.+.+..+ +++|+|||||... .+..+.++.+++||.+....|
T Consensus 157 ~~LPl~~~i~~~i~~vHgGl~p~~~~l~qi~~i~r~~e~~~~g-~~~dlLWsdp~~~~~~w~~~~rG~~~~fG~~~~~~f 235 (330)
T 1fjm_A 157 NCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQG-LLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKF 235 (330)
T ss_dssp TTCCCEEEETTTEEEESSCCCTTCSCHHHHHHCCSSCCCCSSS-HHHHHHHCEECTTCSSEEECTTSSSEEECHHHHHHH
T ss_pred HhCCceEEEcCcEEEEccCCCcccCCHHHHhhhhcCccCcccc-hHHHHHhcCCccccCCcCcccCCCceeeChHHHHHH
Confidence 9999999999999999999999999999999999999887665 8899999999753 454556666789999887665
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-43 Score=387.00 Aligned_cols=217 Identities=35% Similarity=0.608 Sum_probs=197.3
Q ss_pred HHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecCCEEEEccCCCCHHHHHHHHHHhCCCCCCC
Q 004198 531 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG 610 (769)
Q Consensus 531 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~ 610 (769)
++.+++.|.+.+ .|+++++.+||++|.++|++||+++++..|++||||||||+.+|+++|+..+.++.+
T Consensus 43 ~d~l~~~~~~~~----------~l~~~~i~~L~~~a~~il~~Ep~ll~l~~pI~VIGDIHGq~~dL~~LL~~~g~p~~d- 111 (521)
T 1aui_A 43 VDILKAHLMKEG----------RLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT- 111 (521)
T ss_dssp HHHHHHHHHTTC----------CBCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTC-
T ss_pred HHHHHHHHHhCC----------CCCHHHHHHHHHHHHHHHHhCCCeEeeccceeeccCCCCCHHHHHHHHHhcCCCCcc-
Confidence 567888888653 478999999999999999999999999999999999999999999999988887765
Q ss_pred CCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCCCchhhhHHHhHhh
Q 004198 611 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF 690 (769)
Q Consensus 611 ~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~f 690 (769)
+|||||||||||++|+|||.+|++||++||.++++||||||.+.++..|||.+||..+|+ ..+|+.+.++|
T Consensus 112 -----~yVFLGDyVDRGp~S~Evl~lL~aLk~~~P~~v~lLRGNHE~~~l~~~ygF~~E~~~ky~----~~l~~~~~~~f 182 (521)
T 1aui_A 112 -----RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS----ERVYDACMDAF 182 (521)
T ss_dssp -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHSSHHHHHHHHSC----HHHHHHHHHHH
T ss_pred -----eEEEcCCcCCCCCCHHHHHHHHHHHhhhCCCeEEEecCCccHHHHHHHhCccHHHHHhhh----hHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999994 57999999999
Q ss_pred ccccceEEEeceEEEEcCCCCCCCCChHHhhhccCCcccCCCccceeceeccCCCCCc-------cc-c-cCcceEEeeh
Q 004198 691 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWFVLNIST-------IL-R-SMVLYIILFS 761 (769)
Q Consensus 691 ~~lP~~~~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~~~-------~~-~-~~~~~~~~~~ 761 (769)
++||++++++++++|||||++|.+.++++|+.++||.+++..+ +++|||||||.... .+ . +.++.++.||
T Consensus 183 ~~LPlaaii~~~il~VHGGlsP~~~sld~I~~I~R~~e~p~~g-~~~DLLWSDP~~~~g~~~~~~~f~~ns~RG~g~~FG 261 (521)
T 1aui_A 183 DCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG-PMCDILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYS 261 (521)
T ss_dssp TTSCCEEEETTTEEEESSCCCTTCCSHHHHHHSCCSSSCCSSS-HHHHHHHCEECTTTTSCSSCCCEEECTTTTSSEEEC
T ss_pred HhCCceEEecCCceEECCCcCcccCCHHHhhhccCCcCCCccc-hhhhheecCccccccccccCcceecccCCCcccccC
Confidence 9999999999999999999999999999999999999888766 89999999998642 12 1 2456677899
Q ss_pred hhhhhhc
Q 004198 762 LKIFISF 768 (769)
Q Consensus 762 ~~~~~~~ 768 (769)
.++..+|
T Consensus 262 ~d~v~~F 268 (521)
T 1aui_A 262 YPAVCEF 268 (521)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9988776
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-43 Score=369.74 Aligned_cols=218 Identities=39% Similarity=0.666 Sum_probs=199.5
Q ss_pred HHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecCCEEEEccCCCCHHHHHHHHHHhCCCCCCC
Q 004198 531 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG 610 (769)
Q Consensus 531 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~ 610 (769)
++++|+.|.+.+ .|+++++.+||++|+++|++||+++++..|++||||||||+.+|.++|+..+.++..
T Consensus 10 ~~~~i~~~~~~~----------~l~~~~~~~l~~~~~~il~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~- 78 (309)
T 2ie4_C 10 LDQWIEQLNECK----------QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDT- 78 (309)
T ss_dssp HHHHHHHHTTTC----------CCCHHHHHHHHHHHHHHHHHSCTTEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTS-
T ss_pred HHHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHHhCCCEEeccCCEEEEecCCCCHHHHHHHHHHcCCCCCC-
Confidence 688899988652 589999999999999999999999999999999999999999999999999987765
Q ss_pred CCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCCCchhhhHHHhHhh
Q 004198 611 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF 690 (769)
Q Consensus 611 ~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~f 690 (769)
.|||||||||||++|+||+.+|++||+++|.++++||||||.+.++..|||.+||..+|+.. .+|+.+.++|
T Consensus 79 -----~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~~gf~~e~~~~yg~~---~l~~~~~~~~ 150 (309)
T 2ie4_C 79 -----NYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNA---NVWKYFTDLF 150 (309)
T ss_dssp -----CEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSTTGGGTSSHHHHHHHHSSST---HHHHHHHHHT
T ss_pred -----EEEEeCCccCCCCChHHHHHHHHHHHhhCCCcEEEEeCCCCHHHHhhhhhhhHHHHhhcccH---HHHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999753 6899999999
Q ss_pred ccccceEEEeceEEEEcCCCCCCCCChHHhhhccCCcccCCCccceeceeccCCCCC-cccccCcceEEeehhhhhhhc
Q 004198 691 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWFVLNIS-TILRSMVLYIILFSLKIFISF 768 (769)
Q Consensus 691 ~~lP~~~~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~~-~~~~~~~~~~~~~~~~~~~~~ 768 (769)
++||++++++++++|||||++|.+.++++|+.++|+.+.+..+ .++|+|||||.+. .+..+..+.++.||.+...+|
T Consensus 151 ~~LPl~~~i~~~il~vHgGl~p~~~~~~~i~~i~r~~~~~~~~-~~~dllWsdp~~~~~~~~s~RG~g~~fG~~~~~~f 228 (309)
T 2ie4_C 151 DYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEG-PMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETF 228 (309)
T ss_dssp TSSCSCEEETTTEEECSSCCCTTCCSHHHHHTSCCSSCCCSSS-HHHHHHHCEECSSSSEEECTTSSSEEECHHHHHHH
T ss_pred HhCCceEEEcCcEEEECCCCCCcccCHHHHHhhcccccCChhH-HHHHHhhCCCccccccccCCCCcccccCHHHHHHH
Confidence 9999999999999999999999999999999999999887766 7899999999754 444556677788999987766
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-39 Score=343.92 Aligned_cols=281 Identities=18% Similarity=0.255 Sum_probs=236.4
Q ss_pred CCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccccc
Q 004198 24 EDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAH 103 (769)
Q Consensus 24 ~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P~~R~~h 103 (769)
.+-|.+|.+|+++.+ +++||+|||.. .. ..+++++||+.+++|++++. .|.+|..|
T Consensus 9 ~~~~~~~~~~~~~~~------~~~i~v~GG~~--~~-------------~~~~~~~~d~~~~~W~~~~~---~p~~r~~~ 64 (308)
T 1zgk_A 9 HSSGLVPRGSHAPKV------GRLIYTAGGYF--RQ-------------SLSYLEAYNPSNGTWLRLAD---LQVPRSGL 64 (308)
T ss_dssp ------------CCC------CCCEEEECCBS--SS-------------BCCCEEEEETTTTEEEECCC---CSSCCBSC
T ss_pred ccCCeeeCCccccCC------CCEEEEEeCcC--CC-------------CcceEEEEcCCCCeEeECCC---CCcccccc
Confidence 456889999999999 89999999982 11 57899999999999999864 58899999
Q ss_pred eEEEECCEEEEECccC---CCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCc
Q 004198 104 AAAAVGTMVVFQGGIG---PAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSD 180 (769)
Q Consensus 104 s~~~~~~~Iyv~GG~~---~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~d 180 (769)
+++.+++.||++||.. ......+++|+||+.+ .+|+++ .++|.+|.+|+++++++ .||++||.++...+++
T Consensus 65 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~--~~W~~~---~~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~ 138 (308)
T 1zgk_A 65 AGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMT--NQWSPC---APMSVPRNRIGVGVIDG-HIYAVGGSHGCIHHNS 138 (308)
T ss_dssp EEEEETTEEEEECCEEEETTEEEECCCEEEEETTT--TEEEEC---CCCSSCCBTCEEEEETT-EEEEECCEETTEECCC
T ss_pred eEEEECCEEEEECCCcCCCCCCeecceEEEECCCC--CeEeEC---CCCCcCccccEEEEECC-EEEEEcCCCCCccccc
Confidence 9999999999999974 3445678999999999 779999 47999999999998876 9999999988788999
Q ss_pred eeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCccc
Q 004198 181 AWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRY 260 (769)
Q Consensus 181 v~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~ 260 (769)
+++||+.++ +|+.+.++ |.+|..|++++. +++||++||.+... .+++++.||..++ +|..++.+ |.+|.
T Consensus 139 ~~~yd~~~~--~W~~~~~~---p~~r~~~~~~~~-~~~iyv~GG~~~~~-~~~~~~~yd~~~~---~W~~~~~~-p~~r~ 207 (308)
T 1zgk_A 139 VERYEPERD--EWHLVAPM---LTRRIGVGVAVL-NRLLYAVGGFDGTN-RLNSAECYYPERN---EWRMITAM-NTIRS 207 (308)
T ss_dssp EEEEETTTT--EEEECCCC---SSCCBSCEEEEE-TTEEEEECCBCSSC-BCCCEEEEETTTT---EEEECCCC-SSCCB
T ss_pred EEEECCCCC--eEeECCCC---CccccceEEEEE-CCEEEEEeCCCCCC-cCceEEEEeCCCC---eEeeCCCC-CCccc
Confidence 999999999 99999765 788999998875 88999999997664 3899999999887 88888654 78999
Q ss_pred ceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccCcccccceEEEEeCCEE
Q 004198 261 QHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRI 340 (769)
Q Consensus 261 ~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~~~~i 340 (769)
.|++++++++|||+||..... ..+++++||+++++|+.+..++. +|..|++++++++|
T Consensus 208 ~~~~~~~~~~iyv~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~p~------------------~r~~~~~~~~~~~i 265 (308)
T 1zgk_A 208 GAGVCVLHNCIYAAGGYDGQD----QLNSVERYDVETETWTFVAPMKH------------------RRSALGITVHQGRI 265 (308)
T ss_dssp SCEEEEETTEEEEECCBCSSS----BCCCEEEEETTTTEEEECCCCSS------------------CCBSCEEEEETTEE
T ss_pred cceEEEECCEEEEEeCCCCCC----ccceEEEEeCCCCcEEECCCCCC------------------CccceEEEEECCEE
Confidence 999999999999999987543 26889999999999999987644 89999999999999
Q ss_pred EEEcCcCCCccccceEEecCCCCcccc
Q 004198 341 YIYGGLKGDILLDDFLVAENSPFQSDV 367 (769)
Q Consensus 341 yv~GG~~~~~~~~D~~~ld~~~~~~~~ 367 (769)
||+||.++...+++++++|..+.+|..
T Consensus 266 ~v~GG~~~~~~~~~v~~yd~~~~~W~~ 292 (308)
T 1zgk_A 266 YVLGGYDGHTFLDSVECYDPDTDTWSE 292 (308)
T ss_dssp EEECCBCSSCBCCEEEEEETTTTEEEE
T ss_pred EEEcCcCCCcccceEEEEcCCCCEEee
Confidence 999999988889999999998877664
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-38 Score=341.93 Aligned_cols=285 Identities=17% Similarity=0.192 Sum_probs=227.8
Q ss_pred cCCCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECC--CCcEEEecCCCCCC-c
Q 004198 22 TDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVL--TRKWTRIRPAGEPP-S 98 (769)
Q Consensus 22 ~~~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~--~~~W~~l~~~g~~P-~ 98 (769)
.++++|.+|.+|+++.+ +++||||||.. .+++++||+. +++|+++++. | .
T Consensus 2 ~l~~lP~~r~~~~~~~~------~~~iyv~GG~~------------------~~~~~~~d~~~~~~~W~~~~~~---p~~ 54 (357)
T 2uvk_A 2 VLPETPVPFKSGTGAID------NDTVYIGLGSA------------------GTAWYKLDTQAKDKKWTALAAF---PGG 54 (357)
T ss_dssp CSCCCSSCCCSCEEEEE------TTEEEEECGGG------------------TTCEEEEETTSSSCCEEECCCC---TTC
T ss_pred CCCCCCccccceEEEEE------CCEEEEEeCcC------------------CCeEEEEccccCCCCeeECCCC---CCC
Confidence 46789999999999999 89999999964 2589999998 4999999764 6 7
Q ss_pred ccccceEEEECCEEEEECccC----CCCCCcCcEEEEEccCCcceEEEeeecCCC-CCCccccEEEEECCcEEEEEecCC
Q 004198 99 PRAAHAAAAVGTMVVFQGGIG----PAGHSTDDLYVLDLTNDKFKWHRVVVQGQG-PGPRYGHVMDLVSQRYLVSVSGND 173 (769)
Q Consensus 99 ~R~~hs~~~~~~~Iyv~GG~~----~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~-p~~R~~hs~~~~~~~~l~v~GG~~ 173 (769)
+|.+|++++++++|||+||.+ .....++++|+||+.+ .+|+++. ++ |.+|++|++++.++ +|||+||.+
T Consensus 55 ~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~--~~W~~~~---~~~p~~r~~~~~~~~~~-~iyv~GG~~ 128 (357)
T 2uvk_A 55 PRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKT--NSWVKLM---SHAPMGMAGHVTFVHNG-KAYVTGGVN 128 (357)
T ss_dssp CCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTT--TEEEECS---CCCSSCCSSEEEEEETT-EEEEEECCC
T ss_pred cCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCC--CcEEECC---CCCCcccccceEEEECC-EEEEEeCcC
Confidence 899999999999999999982 2345689999999999 7799995 34 59999999988776 999999986
Q ss_pred CC----------------------------------CccCceeEEeCCCCCceEEEcCCCCCCCCcccc-cEEEEecCCE
Q 004198 174 GK----------------------------------RVLSDAWALDTAQKPYVWQRLNPEGDRPSARMY-ATASARSDGM 218 (769)
Q Consensus 174 ~~----------------------------------~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~-hsa~~~~~g~ 218 (769)
.. ..++++++||+.++ +|+.+.++ |.+|.. |++++ .+++
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~--~W~~~~~~---p~~~~~~~~~~~-~~~~ 202 (357)
T 2uvk_A 129 QNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQ--QWSYAGES---PWYGTAGAAVVN-KGDK 202 (357)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTT--EEEEEEEC---SSCCCBSCEEEE-ETTE
T ss_pred CCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCC--cEEECCCC---CCCCcccccEEE-ECCE
Confidence 54 25789999999999 99999654 666666 66554 5889
Q ss_pred EEEEcccCCCCCcccceEEEec--CCCCceEEEeCCCC-CCCcccceEEEEeCCEEEEEecccCCCC-------------
Q 004198 219 FLLCGGRDASGAPLADAYGLLM--HRNGQWEWTLAPGV-APSPRYQHAAVFVGARLHVTGGALRGGR------------- 282 (769)
Q Consensus 219 l~v~GG~~~~~~~l~d~~~ld~--~~~~~W~W~~~~~~-~P~~R~~hs~~~~~~~i~V~GG~~~~~~------------- 282 (769)
||++||.+..+...++++.|+. .++ +|..++.. .|.+|.+|++++++++|||+||....+.
T Consensus 203 iyv~GG~~~~~~~~~~v~~~d~d~~~~---~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~ 279 (357)
T 2uvk_A 203 TWLINGEAKPGLRTDAVFELDFTGNNL---KWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHE 279 (357)
T ss_dssp EEEECCEEETTEECCCEEEEECC---C---EEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTT
T ss_pred EEEEeeecCCCcccCceEEEEecCCCC---cEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccc
Confidence 9999998766666889999986 544 77777654 2445778999999999999999754321
Q ss_pred cccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccCcccccceEEEEeCCEEEEEcCcCCC-ccccceEEecCC
Q 004198 283 AIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGD-ILLDDFLVAENS 361 (769)
Q Consensus 283 ~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~~~~iyv~GG~~~~-~~~~D~~~ld~~ 361 (769)
......++++||+++++|+.+..++. +|..|+++.++++||||||.+.. ..++|++.|+++
T Consensus 280 ~~~~~~~~~~yd~~~~~W~~~~~~p~------------------~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~ 341 (357)
T 2uvk_A 280 GLKKSYSTDIHLWHNGKWDKSGELSQ------------------GRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVK 341 (357)
T ss_dssp TCCCEECCEEEECC---CEEEEECSS------------------CCBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-
T ss_pred cccceeeEEEEecCCCceeeCCCCCC------------------CcccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEc
Confidence 11124679999999999999977644 89999999999999999999765 457999998888
Q ss_pred CCccc
Q 004198 362 PFQSD 366 (769)
Q Consensus 362 ~~~~~ 366 (769)
+-++.
T Consensus 342 ~~~~~ 346 (357)
T 2uvk_A 342 DNKVT 346 (357)
T ss_dssp CCSCE
T ss_pred CcEeE
Confidence 76544
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-37 Score=329.89 Aligned_cols=266 Identities=18% Similarity=0.221 Sum_probs=234.8
Q ss_pred CCCcccccceeecCCCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEE
Q 004198 10 APSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTR 89 (769)
Q Consensus 10 ~~~y~~~~~~w~~~~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~ 89 (769)
.-.||+.+++|...+++|.+|.+|+++.+ +++||+|||.. .. ..+++++||+.+++|++
T Consensus 26 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~------~~~lyv~GG~~--~~-------------~~~~~~~~d~~~~~W~~ 84 (306)
T 3ii7_A 26 CRYFNPKDYSWTDIRCPFEKRRDAACVFW------DNVVYILGGSQ--LF-------------PIKRMDCYNVVKDSWYS 84 (306)
T ss_dssp EEEEETTTTEEEECCCCSCCCBSCEEEEE------TTEEEEECCBS--SS-------------BCCEEEEEETTTTEEEE
T ss_pred EEEecCCCCCEecCCCCCcccceeEEEEE------CCEEEEEeCCC--CC-------------CcceEEEEeCCCCeEEE
Confidence 45799999999999999999999999999 89999999987 21 57899999999999999
Q ss_pred ecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEE
Q 004198 90 IRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSV 169 (769)
Q Consensus 90 l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~ 169 (769)
+++ +|.+|..|+++.++++||++||.+.....++++|+||+.+ .+|+.+ +++|.+|.+|+++.+++ .||++
T Consensus 85 ~~~---~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~--~~W~~~---~~~p~~r~~~~~~~~~~-~iyv~ 155 (306)
T 3ii7_A 85 KLG---PPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRT--ESWHTK---PSMLTQRCSHGMVEANG-LIYVC 155 (306)
T ss_dssp EEC---CSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTT--TEEEEE---CCCSSCCBSCEEEEETT-EEEEE
T ss_pred CCC---CCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCC--CceEeC---CCCcCCcceeEEEEECC-EEEEE
Confidence 975 4789999999999999999999875667789999999999 779999 58999999999988876 99999
Q ss_pred ecCCCCCc----cCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCc
Q 004198 170 SGNDGKRV----LSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQ 245 (769)
Q Consensus 170 GG~~~~~~----~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~ 245 (769)
||.++... ++++|+||+.++ +|+.+.++ |.+|..|++++. +++||++||.+.. ..+++++.||..++
T Consensus 156 GG~~~~~~~~~~~~~~~~yd~~~~--~W~~~~~~---p~~r~~~~~~~~-~~~i~v~GG~~~~-~~~~~~~~yd~~~~-- 226 (306)
T 3ii7_A 156 GGSLGNNVSGRVLNSCEVYDPATE--TWTELCPM---IEARKNHGLVFV-KDKIFAVGGQNGL-GGLDNVEYYDIKLN-- 226 (306)
T ss_dssp CCEESCTTTCEECCCEEEEETTTT--EEEEECCC---SSCCBSCEEEEE-TTEEEEECCEETT-EEBCCEEEEETTTT--
T ss_pred CCCCCCCCcccccceEEEeCCCCC--eEEECCCc---cchhhcceEEEE-CCEEEEEeCCCCC-CCCceEEEeeCCCC--
Confidence 99877655 899999999999 99999765 788999998876 7899999998765 45899999999988
Q ss_pred eEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccCc
Q 004198 246 WEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLEL 325 (769)
Q Consensus 246 W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (769)
+|..++.. |.+|..|++++++++|||+||..... ..+++++||+++++|+.+..++.
T Consensus 227 -~W~~~~~~-p~~r~~~~~~~~~~~i~v~GG~~~~~----~~~~~~~yd~~~~~W~~~~~~~~----------------- 283 (306)
T 3ii7_A 227 -EWKMVSPM-PWKGVTVKCAAVGSIVYVLAGFQGVG----RLGHILEYNTETDKWVANSKVRA----------------- 283 (306)
T ss_dssp -EEEECCCC-SCCBSCCEEEEETTEEEEEECBCSSS----BCCEEEEEETTTTEEEEEEEEEC-----------------
T ss_pred -cEEECCCC-CCCccceeEEEECCEEEEEeCcCCCe----eeeeEEEEcCCCCeEEeCCCccc-----------------
Confidence 88888654 78999999999999999999986543 36789999999999999987754
Q ss_pred ccccceEEEEeCC
Q 004198 326 MRRCRHASASIGV 338 (769)
Q Consensus 326 ~~R~~hs~~~~~~ 338 (769)
+|.+|+++++.+
T Consensus 284 -~r~~~~~~~~~~ 295 (306)
T 3ii7_A 284 -FPVTSCLICVVD 295 (306)
T ss_dssp -CSCTTCEEEEEE
T ss_pred -ccceeEEEEECC
Confidence 899999988754
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-37 Score=327.82 Aligned_cols=269 Identities=18% Similarity=0.263 Sum_probs=231.8
Q ss_pred CCCCcccccceeecCCCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEE
Q 004198 9 PAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWT 88 (769)
Q Consensus 9 ~~~~y~~~~~~w~~~~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~ 88 (769)
..-+||+.++.|...+++|.+|.+|+++.+ +++||+|||..... ..+++++||+.+++|+
T Consensus 31 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~------~~~lyv~GG~~~~~--------------~~~~~~~~d~~~~~W~ 90 (302)
T 2xn4_A 31 SVECYDFKEERWHQVAELPSRRCRAGMVYM------AGLVFAVGGFNGSL--------------RVRTVDSYDPVKDQWT 90 (302)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSCEEEEE------TTEEEEESCBCSSS--------------BCCCEEEEETTTTEEE
T ss_pred cEEEEcCcCCcEeEcccCCcccccceEEEE------CCEEEEEeCcCCCc--------------cccceEEECCCCCcee
Confidence 356899999999999999999999999999 89999999986432 4689999999999999
Q ss_pred EecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEE
Q 004198 89 RIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVS 168 (769)
Q Consensus 89 ~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v 168 (769)
.+++. |.+|..|+++.++++||++||... ...++++|+||+.+ .+|+.+ +++|.+|++|+++++++ .||+
T Consensus 91 ~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~~d~~~--~~W~~~---~~~p~~r~~~~~~~~~~-~iyv 160 (302)
T 2xn4_A 91 SVANM---RDRRSTLGAAVLNGLLYAVGGFDG-STGLSSVEAYNIKS--NEWFHV---APMNTRRSSVGVGVVGG-LLYA 160 (302)
T ss_dssp EECCC---SSCCBSCEEEEETTEEEEEEEECS-SCEEEEEEEEETTT--TEEEEE---CCCSSCCBSCEEEEETT-EEEE
T ss_pred eCCCC---CccccceEEEEECCEEEEEcCCCC-CccCceEEEEeCCC--CeEeec---CCCCCcccCceEEEECC-EEEE
Confidence 99854 789999999999999999999854 34678999999999 779999 58899999999988876 9999
Q ss_pred EecCCCCC--ccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCce
Q 004198 169 VSGNDGKR--VLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQW 246 (769)
Q Consensus 169 ~GG~~~~~--~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W 246 (769)
+||.++.. .++++++||+.++ +|+.+..+ |.+|..|++++. +++||++||.+.. ..+++++.||..++
T Consensus 161 ~GG~~~~~~~~~~~~~~yd~~~~--~W~~~~~~---p~~r~~~~~~~~-~~~iyv~GG~~~~-~~~~~~~~yd~~~~--- 230 (302)
T 2xn4_A 161 VGGYDVASRQCLSTVECYNATTN--EWTYIAEM---STRRSGAGVGVL-NNLLYAVGGHDGP-LVRKSVEVYDPTTN--- 230 (302)
T ss_dssp ECCEETTTTEECCCEEEEETTTT--EEEEECCC---SSCCBSCEEEEE-TTEEEEECCBSSS-SBCCCEEEEETTTT---
T ss_pred EeCCCCCCCccccEEEEEeCCCC--cEEECCCC---ccccccccEEEE-CCEEEEECCCCCC-cccceEEEEeCCCC---
Confidence 99986653 5899999999999 99999765 788999988765 7899999998754 45789999999877
Q ss_pred EEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCcEEecc-CCccCCCCCCCCCCCCCccCc
Q 004198 247 EWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRN-GLVTSSRTSKGHGEHDPSLEL 325 (769)
Q Consensus 247 ~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~-~~~~~~~~~~~~~~~~~~~~~ 325 (769)
+|..++.. |.+|..|+++.++++|||+||..... ..+++++||+++++|+.+. .++
T Consensus 231 ~W~~~~~~-~~~r~~~~~~~~~~~i~v~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~~~------------------ 287 (302)
T 2xn4_A 231 AWRQVADM-NMCRRNAGVCAVNGLLYVVGGDDGSC----NLASVEYYNPTTDKWTVVSSCMS------------------ 287 (302)
T ss_dssp EEEEECCC-SSCCBSCEEEEETTEEEEECCBCSSS----BCCCEEEEETTTTEEEECSSCCS------------------
T ss_pred CEeeCCCC-CCccccCeEEEECCEEEEECCcCCCc----ccccEEEEcCCCCeEEECCcccC------------------
Confidence 77777654 78999999999999999999976533 2678999999999999987 453
Q ss_pred ccccceEEEEeCCEE
Q 004198 326 MRRCRHASASIGVRI 340 (769)
Q Consensus 326 ~~R~~hs~~~~~~~i 340 (769)
.+|..|++++++++|
T Consensus 288 ~~r~~~~~~~~~~~i 302 (302)
T 2xn4_A 288 TGRSYAGVTVIDKRL 302 (302)
T ss_dssp SCCBSCEEEEEEC--
T ss_pred cccccceEEEecccC
Confidence 399999999998875
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-37 Score=326.31 Aligned_cols=267 Identities=19% Similarity=0.270 Sum_probs=232.4
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCC
Q 004198 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHS 124 (769)
Q Consensus 45 ~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~ 124 (769)
+++||+|||.... ..+++++||+.+++|++++. .|.+|..|+++.++++||++||.... ..
T Consensus 15 ~~~i~v~GG~~~~---------------~~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~~~lyv~GG~~~~-~~ 75 (302)
T 2xn4_A 15 PKLMVVVGGQAPK---------------AIRSVECYDFKEERWHQVAE---LPSRRCRAGMVYMAGLVFAVGGFNGS-LR 75 (302)
T ss_dssp CEEEEEECCBSSS---------------BCCCEEEEETTTTEEEEECC---CSSCCBSCEEEEETTEEEEESCBCSS-SB
T ss_pred CCEEEEECCCCCC---------------CCCcEEEEcCcCCcEeEccc---CCcccccceEEEECCEEEEEeCcCCC-cc
Confidence 6799999997531 46789999999999999964 47899999999999999999998543 46
Q ss_pred cCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCC
Q 004198 125 TDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPS 204 (769)
Q Consensus 125 ~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~ 204 (769)
.+++|+||+.+ .+|+++ .++|.+|.+|+++++++ .||++||.++...++++|+||+.++ +|+.+.++ |.
T Consensus 76 ~~~~~~~d~~~--~~W~~~---~~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~d~~~~--~W~~~~~~---p~ 144 (302)
T 2xn4_A 76 VRTVDSYDPVK--DQWTSV---ANMRDRRSTLGAAVLNG-LLYAVGGFDGSTGLSSVEAYNIKSN--EWFHVAPM---NT 144 (302)
T ss_dssp CCCEEEEETTT--TEEEEE---CCCSSCCBSCEEEEETT-EEEEEEEECSSCEEEEEEEEETTTT--EEEEECCC---SS
T ss_pred ccceEEECCCC--CceeeC---CCCCccccceEEEEECC-EEEEEcCCCCCccCceEEEEeCCCC--eEeecCCC---CC
Confidence 79999999999 779999 47999999999998876 9999999988888999999999999 99999765 78
Q ss_pred cccccEEEEecCCEEEEEcccCCCC-CcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCc
Q 004198 205 ARMYATASARSDGMFLLCGGRDASG-APLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRA 283 (769)
Q Consensus 205 ~r~~hsa~~~~~g~l~v~GG~~~~~-~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~ 283 (769)
+|..|++++. +++||++||.+... ..+++++.||..++ +|..++.. |.+|..|++++++++|||+||.....
T Consensus 145 ~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~---~W~~~~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~-- 217 (302)
T 2xn4_A 145 RRSSVGVGVV-GGLLYAVGGYDVASRQCLSTVECYNATTN---EWTYIAEM-STRRSGAGVGVLNNLLYAVGGHDGPL-- 217 (302)
T ss_dssp CCBSCEEEEE-TTEEEEECCEETTTTEECCCEEEEETTTT---EEEEECCC-SSCCBSCEEEEETTEEEEECCBSSSS--
T ss_pred cccCceEEEE-CCEEEEEeCCCCCCCccccEEEEEeCCCC---cEEECCCC-ccccccccEEEECCEEEEECCCCCCc--
Confidence 8999988764 78999999997654 34899999999877 77777554 78999999999999999999976532
Q ss_pred ccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccCcccccceEEEEeCCEEEEEcCcCCCccccceEEecCCCC
Q 004198 284 IEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLDDFLVAENSPF 363 (769)
Q Consensus 284 ~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~~~~iyv~GG~~~~~~~~D~~~ld~~~~ 363 (769)
..+++++||+++++|+.+..++. +|..|+++.++++|||+||.++...+++++++|..+.
T Consensus 218 --~~~~~~~yd~~~~~W~~~~~~~~------------------~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 218 --VRKSVEVYDPTTNAWRQVADMNM------------------CRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp --BCCCEEEEETTTTEEEEECCCSS------------------CCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred --ccceEEEEeCCCCCEeeCCCCCC------------------ccccCeEEEECCEEEEECCcCCCcccccEEEEcCCCC
Confidence 26789999999999999987744 8999999999999999999988888999999999988
Q ss_pred ccccC
Q 004198 364 QSDVN 368 (769)
Q Consensus 364 ~~~~~ 368 (769)
+|...
T Consensus 278 ~W~~~ 282 (302)
T 2xn4_A 278 KWTVV 282 (302)
T ss_dssp EEEEC
T ss_pred eEEEC
Confidence 77653
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-37 Score=327.58 Aligned_cols=269 Identities=19% Similarity=0.270 Sum_probs=232.1
Q ss_pred CCCCcccccceeecCCCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEE
Q 004198 9 PAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWT 88 (769)
Q Consensus 9 ~~~~y~~~~~~w~~~~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~ 88 (769)
..-.||+.+++|...+++|.+|.+|+++.+ +++||+|||....... ....+++++||+.+++|+
T Consensus 40 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~------~~~lyv~GG~~~~~~~----------~~~~~~~~~~d~~~~~W~ 103 (308)
T 1zgk_A 40 YLEAYNPSNGTWLRLADLQVPRSGLAGCVV------GGLLYAVGGRNNSPDG----------NTDSSALDCYNPMTNQWS 103 (308)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBSCEEEEE------TTEEEEECCEEEETTE----------EEECCCEEEEETTTTEEE
T ss_pred eEEEEcCCCCeEeECCCCCcccccceEEEE------CCEEEEECCCcCCCCC----------CeecceEEEECCCCCeEe
Confidence 346799999999999999999999999999 8999999997411000 015789999999999999
Q ss_pred EecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEE
Q 004198 89 RIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVS 168 (769)
Q Consensus 89 ~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v 168 (769)
+++++ |.+|..|+++.++++||++||.... ..++++++||+.+ .+|+.+ .++|.+|++|+++++++ .||+
T Consensus 104 ~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~yd~~~--~~W~~~---~~~p~~r~~~~~~~~~~-~iyv 173 (308)
T 1zgk_A 104 PCAPM---SVPRNRIGVGVIDGHIYAVGGSHGC-IHHNSVERYEPER--DEWHLV---APMLTRRIGVGVAVLNR-LLYA 173 (308)
T ss_dssp ECCCC---SSCCBTCEEEEETTEEEEECCEETT-EECCCEEEEETTT--TEEEEC---CCCSSCCBSCEEEEETT-EEEE
T ss_pred ECCCC---CcCccccEEEEECCEEEEEcCCCCC-cccccEEEECCCC--CeEeEC---CCCCccccceEEEEECC-EEEE
Confidence 98754 7899999999999999999997543 4578999999999 779999 47899999999998875 9999
Q ss_pred EecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEE
Q 004198 169 VSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEW 248 (769)
Q Consensus 169 ~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W 248 (769)
+||.++...++++++||+.++ +|+.+..+ |.+|..|++++. +++||++||.+.. ..+++++.||+.++ +|
T Consensus 174 ~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~---p~~r~~~~~~~~-~~~iyv~GG~~~~-~~~~~v~~yd~~~~---~W 243 (308)
T 1zgk_A 174 VGGFDGTNRLNSAECYYPERN--EWRMITAM---NTIRSGAGVCVL-HNCIYAAGGYDGQ-DQLNSVERYDVETE---TW 243 (308)
T ss_dssp ECCBCSSCBCCCEEEEETTTT--EEEECCCC---SSCCBSCEEEEE-TTEEEEECCBCSS-SBCCCEEEEETTTT---EE
T ss_pred EeCCCCCCcCceEEEEeCCCC--eEeeCCCC---CCccccceEEEE-CCEEEEEeCCCCC-CccceEEEEeCCCC---cE
Confidence 999988878999999999999 99999765 788999988865 8899999999754 34899999999987 88
Q ss_pred EeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccCcccc
Q 004198 249 TLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRR 328 (769)
Q Consensus 249 ~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~R 328 (769)
..++.. |.+|..|++++++++|||+||..... ..+++++||+++++|+.+..++. +|
T Consensus 244 ~~~~~~-p~~r~~~~~~~~~~~i~v~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~p~------------------~r 300 (308)
T 1zgk_A 244 TFVAPM-KHRRSALGITVHQGRIYVLGGYDGHT----FLDSVECYDPDTDTWSEVTRMTS------------------GR 300 (308)
T ss_dssp EECCCC-SSCCBSCEEEEETTEEEEECCBCSSC----BCCEEEEEETTTTEEEEEEECSS------------------CC
T ss_pred EECCCC-CCCccceEEEEECCEEEEEcCcCCCc----ccceEEEEcCCCCEEeecCCCCC------------------Cc
Confidence 888754 79999999999999999999976533 36789999999999999987754 99
Q ss_pred cceEEEEe
Q 004198 329 CRHASASI 336 (769)
Q Consensus 329 ~~hs~~~~ 336 (769)
+.|+++++
T Consensus 301 ~~~~~~~l 308 (308)
T 1zgk_A 301 SGVGVAVT 308 (308)
T ss_dssp BSCEEEEC
T ss_pred ccceeEeC
Confidence 99999864
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=324.97 Aligned_cols=264 Identities=19% Similarity=0.258 Sum_probs=231.4
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCC
Q 004198 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHS 124 (769)
Q Consensus 45 ~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~ 124 (769)
.+.||+|||... .+++++||+.+++|++++. +|.+|.+|+++.+++.||++||.. ...
T Consensus 11 ~~~l~~~GG~~~-----------------~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~~~lyv~GG~~--~~~ 68 (306)
T 3ii7_A 11 HDYRIALFGGSQ-----------------PQSCRYFNPKDYSWTDIRC---PFEKRRDAACVFWDNVVYILGGSQ--LFP 68 (306)
T ss_dssp CCEEEEEECCSS-----------------TTSEEEEETTTTEEEECCC---CSCCCBSCEEEEETTEEEEECCBS--SSB
T ss_pred cceEEEEeCCCC-----------------CceEEEecCCCCCEecCCC---CCcccceeEEEEECCEEEEEeCCC--CCC
Confidence 468999999653 4789999999999999875 478999999999999999999986 567
Q ss_pred cCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCC-CCCccCceeEEeCCCCCceEEEcCCCCCCC
Q 004198 125 TDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGND-GKRVLSDAWALDTAQKPYVWQRLNPEGDRP 203 (769)
Q Consensus 125 ~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~-~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P 203 (769)
++++|+||+.+ .+|+.+. ++|.+|.+|+++++++ .||++||.+ +...++++|+||+.++ +|+++.++ |
T Consensus 69 ~~~~~~~d~~~--~~W~~~~---~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~d~~~~--~W~~~~~~---p 137 (306)
T 3ii7_A 69 IKRMDCYNVVK--DSWYSKL---GPPTPRDSLAACAAEG-KIYTSGGSEVGNSALYLFECYDTRTE--SWHTKPSM---L 137 (306)
T ss_dssp CCEEEEEETTT--TEEEEEE---CCSSCCBSCEEEEETT-EEEEECCBBTTBSCCCCEEEEETTTT--EEEEECCC---S
T ss_pred cceEEEEeCCC--CeEEECC---CCCccccceeEEEECC-EEEEECCCCCCCcEeeeEEEEeCCCC--ceEeCCCC---c
Confidence 89999999999 7799994 7999999999998876 899999987 6778999999999999 99999665 7
Q ss_pred CcccccEEEEecCCEEEEEcccCCCCCc---ccceEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCC
Q 004198 204 SARMYATASARSDGMFLLCGGRDASGAP---LADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRG 280 (769)
Q Consensus 204 ~~r~~hsa~~~~~g~l~v~GG~~~~~~~---l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~ 280 (769)
.+|..|+++.. +++||++||....... +++++.||..++ +|..++.. |.+|.+|++++++++|||+||....
T Consensus 138 ~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~---~W~~~~~~-p~~r~~~~~~~~~~~i~v~GG~~~~ 212 (306)
T 3ii7_A 138 TQRCSHGMVEA-NGLIYVCGGSLGNNVSGRVLNSCEVYDPATE---TWTELCPM-IEARKNHGLVFVKDKIFAVGGQNGL 212 (306)
T ss_dssp SCCBSCEEEEE-TTEEEEECCEESCTTTCEECCCEEEEETTTT---EEEEECCC-SSCCBSCEEEEETTEEEEECCEETT
T ss_pred CCcceeEEEEE-CCEEEEECCCCCCCCcccccceEEEeCCCCC---eEEECCCc-cchhhcceEEEECCEEEEEeCCCCC
Confidence 88999988864 7899999998765442 899999999987 78777654 7899999999999999999998654
Q ss_pred CCcccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccCcccccceEEEEeCCEEEEEcCcCCCccccceEEecC
Q 004198 281 GRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLDDFLVAEN 360 (769)
Q Consensus 281 ~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~~~~iyv~GG~~~~~~~~D~~~ld~ 360 (769)
. ..+++++||+++++|+.+..++. +|..|++++++++|||+||.++...+++++.+|.
T Consensus 213 ~----~~~~~~~yd~~~~~W~~~~~~p~------------------~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~ 270 (306)
T 3ii7_A 213 G----GLDNVEYYDIKLNEWKMVSPMPW------------------KGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNT 270 (306)
T ss_dssp E----EBCCEEEEETTTTEEEECCCCSC------------------CBSCCEEEEETTEEEEEECBCSSSBCCEEEEEET
T ss_pred C----CCceEEEeeCCCCcEEECCCCCC------------------CccceeEEEECCEEEEEeCcCCCeeeeeEEEEcC
Confidence 2 26789999999999999987644 8999999999999999999998888999999999
Q ss_pred CCCccccC
Q 004198 361 SPFQSDVN 368 (769)
Q Consensus 361 ~~~~~~~~ 368 (769)
.+.+|...
T Consensus 271 ~~~~W~~~ 278 (306)
T 3ii7_A 271 ETDKWVAN 278 (306)
T ss_dssp TTTEEEEE
T ss_pred CCCeEEeC
Confidence 98777643
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-38 Score=336.12 Aligned_cols=280 Identities=18% Similarity=0.254 Sum_probs=234.3
Q ss_pred CCcccccceeecCCCC--CCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEE
Q 004198 11 PSYRTLETYWDTDEDA--PGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWT 88 (769)
Q Consensus 11 ~~y~~~~~~w~~~~~~--P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~ 88 (769)
-.||+.+++|.. +++ |.||.+|+++.+ +++||++||........ .....+++++||+.+++|+
T Consensus 16 ~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~------~~~iyv~GG~~~~~~~~--------~~~~~~~~~~~d~~~~~W~ 80 (315)
T 4asc_A 16 VAYDPAANECYC-ASLSSQVPKNHVSLVTK------ENQVFVAGGLFYNEDNK--------EDPMSAYFLQFDHLDSEWL 80 (315)
T ss_dssp EEEETTTTEEEE-EECCCCSCSSEEEEECT------TCCEEEEEEEEECSSCS--------SSCEEEEEEEEETTTTEEE
T ss_pred EEECCCCCeEec-CCCCCCCCccceEEEEE------CCEEEEEcCcccCCCCC--------ccccccceEEecCCCCeEE
Confidence 479999999987 556 458999999998 89999999974222111 0114677999999999999
Q ss_pred EecCCCCCCcccccceEEEECCEEEEECccC--CCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEE
Q 004198 89 RIRPAGEPPSPRAAHAAAAVGTMVVFQGGIG--PAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYL 166 (769)
Q Consensus 89 ~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~--~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l 166 (769)
++++ .|.+|..|+++.++++||++||.. .....++++|+||+.+ .+|+++ +++|.+|++|+++++++ +|
T Consensus 81 ~~~~---~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~--~~W~~~---~~~p~~r~~~~~~~~~~-~i 151 (315)
T 4asc_A 81 GMPP---LPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLS--FKWGES---DPLPYVVYGHTVLSHMD-LV 151 (315)
T ss_dssp ECCC---BSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTT--TEEEEC---CCCSSCCBSCEEEEETT-EE
T ss_pred ECCC---CCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCC--CcEeEC---CCCCCcccceeEEEECC-EE
Confidence 9875 478999999999999999999975 3466789999999999 779999 57999999999998887 89
Q ss_pred EEEecC-CCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCc
Q 004198 167 VSVSGN-DGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQ 245 (769)
Q Consensus 167 ~v~GG~-~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~ 245 (769)
|++||. +....++++|+||+.++ +|+.+.++ |.+|..|++++. +++||++||.+..+ .+++++.||..++
T Consensus 152 yv~GG~~~~~~~~~~~~~yd~~~~--~W~~~~~~---p~~r~~~~~~~~-~~~iyv~GG~~~~~-~~~~~~~yd~~~~-- 222 (315)
T 4asc_A 152 YVIGGKGSDRKCLNKMCVYDPKKF--EWKELAPM---QTARSLFGATVH-DGRIIVAAGVTDTG-LTSSAEVYSITDN-- 222 (315)
T ss_dssp EEECCBCTTSCBCCCEEEEETTTT--EEEECCCC---SSCCBSCEEEEE-TTEEEEEEEECSSS-EEEEEEEEETTTT--
T ss_pred EEEeCCCCCCcccceEEEEeCCCC--eEEECCCC---CCchhceEEEEE-CCEEEEEeccCCCC-ccceEEEEECCCC--
Confidence 999998 66678999999999999 99999765 789999998865 77999999987653 5889999999877
Q ss_pred eEEEeCCCCCCCcccceEEEEeCCEEEEEecccCC----CC-cccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCC
Q 004198 246 WEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRG----GR-AIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHD 320 (769)
Q Consensus 246 W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~----~~-~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~ 320 (769)
+|..++. .|.+|..|+++.++++|||+||.... +. .....+++++||+++++|+.+..
T Consensus 223 -~W~~~~~-~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~--------------- 285 (315)
T 4asc_A 223 -KWAPFEA-FPQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVLR--------------- 285 (315)
T ss_dssp -EEEEECC-CSSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEES---------------
T ss_pred -eEEECCC-CCCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhhcc---------------
Confidence 7877765 47999999999999999999998531 11 01236789999999999999822
Q ss_pred CccCcccccceEEEEeCCEEEEEcC
Q 004198 321 PSLELMRRCRHASASIGVRIYIYGG 345 (769)
Q Consensus 321 ~~~~~~~R~~hs~~~~~~~iyv~GG 345 (769)
.+|..|++++++++|||+..
T Consensus 286 -----~~r~~~~~~~~~~~l~v~~~ 305 (315)
T 4asc_A 286 -----EIAYAAGATFLPVRLNVLRL 305 (315)
T ss_dssp -----CSSCCSSCEEEEEEECGGGS
T ss_pred -----CCcCccceEEeCCEEEEEEe
Confidence 28999999999999999876
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=323.31 Aligned_cols=267 Identities=19% Similarity=0.259 Sum_probs=232.2
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCC
Q 004198 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHS 124 (769)
Q Consensus 45 ~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~ 124 (769)
+++||+|||...... ..+++++||+.+++|+.++. .|.+|.+|+++.+++.||++||.. ....
T Consensus 14 ~~~i~~~GG~~~~~~-------------~~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~~~l~v~GG~~-~~~~ 76 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQS-------------PIDVVEKYDPKTQEWSFLPS---ITRKRRYVASVSLHDRIYVIGGYD-GRSR 76 (301)
T ss_dssp CEEEEEECCEETTTE-------------ECCCEEEEETTTTEEEECCC---CSSCCBSCEEEEETTEEEEECCBC-SSCB
T ss_pred CCEEEEEeCccCCCc-------------ceeEEEEEcCCCCeEEeCCC---CChhhccccEEEECCEEEEEcCCC-CCcc
Confidence 779999999433221 57899999999999999875 478999999999999999999986 4457
Q ss_pred cCcEEEEEccCCcce---EEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCC
Q 004198 125 TDDLYVLDLTNDKFK---WHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGD 201 (769)
Q Consensus 125 ~~dl~~~d~~t~~~~---W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~ 201 (769)
.+++|+||+.+ .+ |+.+ +++|.+|.+|+++++++ ++|++||.++...++++|+||+.++ +|+.+.++
T Consensus 77 ~~~~~~~d~~~--~~~~~W~~~---~~~p~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~d~~~~--~W~~~~~~-- 146 (301)
T 2vpj_A 77 LSSVECLDYTA--DEDGVWYSV---APMNVRRGLAGATTLGD-MIYVSGGFDGSRRHTSMERYDPNID--QWSMLGDM-- 146 (301)
T ss_dssp CCCEEEEETTC--CTTCCCEEE---CCCSSCCBSCEEEEETT-EEEEECCBCSSCBCCEEEEEETTTT--EEEEEEEC--
T ss_pred CceEEEEECCC--CCCCeeEEC---CCCCCCccceeEEEECC-EEEEEcccCCCcccceEEEEcCCCC--eEEECCCC--
Confidence 89999999999 77 9999 58999999999998876 9999999998888999999999999 99999765
Q ss_pred CCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCC
Q 004198 202 RPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGG 281 (769)
Q Consensus 202 ~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~ 281 (769)
|.+|..|++++. +++||++||.+... .+++++.||..++ +|..++.. |.+|..|+++.++++|||+||.....
T Consensus 147 -p~~r~~~~~~~~-~~~iyv~GG~~~~~-~~~~~~~~d~~~~---~W~~~~~~-p~~r~~~~~~~~~~~i~v~GG~~~~~ 219 (301)
T 2vpj_A 147 -QTAREGAGLVVA-SGVIYCLGGYDGLN-ILNSVEKYDPHTG---HWTNVTPM-ATKRSGAGVALLNDHIYVVGGFDGTA 219 (301)
T ss_dssp -SSCCBSCEEEEE-TTEEEEECCBCSSC-BCCCEEEEETTTT---EEEEECCC-SSCCBSCEEEEETTEEEEECCBCSSS
T ss_pred -CCCcccceEEEE-CCEEEEECCCCCCc-ccceEEEEeCCCC---cEEeCCCC-CcccccceEEEECCEEEEEeCCCCCc
Confidence 788999988865 78999999987653 6899999999877 77777544 78999999999999999999986543
Q ss_pred CcccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccCcccccceEEEEeCCEEEEEcCcCCCccccceEEecCC
Q 004198 282 RAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLDDFLVAENS 361 (769)
Q Consensus 282 ~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~~~~iyv~GG~~~~~~~~D~~~ld~~ 361 (769)
. .+++++||+++++|+.+..++. +|..|++++++++|||+||.++...+++++.+|.+
T Consensus 220 ~----~~~v~~yd~~~~~W~~~~~~p~------------------~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~ 277 (301)
T 2vpj_A 220 H----LSSVEAYNIRTDSWTTVTSMTT------------------PRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPI 277 (301)
T ss_dssp B----CCCEEEEETTTTEEEEECCCSS------------------CCBSCEEEEETTEEEEECCBCSSSBEEEEEEEETT
T ss_pred c----cceEEEEeCCCCcEEECCCCCC------------------cccceeEEEECCEEEEEcCcCCCcccccEEEEcCC
Confidence 2 6789999999999999987644 89999999999999999999988888999999998
Q ss_pred CCcccc
Q 004198 362 PFQSDV 367 (769)
Q Consensus 362 ~~~~~~ 367 (769)
+.++..
T Consensus 278 ~~~W~~ 283 (301)
T 2vpj_A 278 IDSWEV 283 (301)
T ss_dssp TTEEEE
T ss_pred CCeEEE
Confidence 877654
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-36 Score=320.41 Aligned_cols=266 Identities=18% Similarity=0.286 Sum_probs=232.2
Q ss_pred CCCCcccccceeecCCCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCc--
Q 004198 9 PAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRK-- 86 (769)
Q Consensus 9 ~~~~y~~~~~~w~~~~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~-- 86 (769)
..-.||+.+++|...+++|.+|.+|+++.+ +++||+|||..... ..+++++||+.+++
T Consensus 32 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~------~~~l~v~GG~~~~~--------------~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 32 VVEKYDPKTQEWSFLPSITRKRRYVASVSL------HDRIYVIGGYDGRS--------------RLSSVECLDYTADEDG 91 (301)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBSCEEEEE------TTEEEEECCBCSSC--------------BCCCEEEEETTCCTTC
T ss_pred EEEEEcCCCCeEEeCCCCChhhccccEEEE------CCEEEEEcCCCCCc--------------cCceEEEEECCCCCCC
Confidence 445799999999999999999999999999 89999999986322 57899999999999
Q ss_pred -EEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcE
Q 004198 87 -WTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRY 165 (769)
Q Consensus 87 -W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~ 165 (769)
|+++++ .|.+|..|+++.++++||++||.... ..++++++||+.+ .+|+.+. ++|.+|.+|+++++++ .
T Consensus 92 ~W~~~~~---~p~~r~~~~~~~~~~~lyv~GG~~~~-~~~~~~~~~d~~~--~~W~~~~---~~p~~r~~~~~~~~~~-~ 161 (301)
T 2vpj_A 92 VWYSVAP---MNVRRGLAGATTLGDMIYVSGGFDGS-RRHTSMERYDPNI--DQWSMLG---DMQTAREGAGLVVASG-V 161 (301)
T ss_dssp CCEEECC---CSSCCBSCEEEEETTEEEEECCBCSS-CBCCEEEEEETTT--TEEEEEE---ECSSCCBSCEEEEETT-E
T ss_pred eeEECCC---CCCCccceeEEEECCEEEEEcccCCC-cccceEEEEcCCC--CeEEECC---CCCCCcccceEEEECC-E
Confidence 999965 47899999999999999999998643 4588999999999 7799995 6899999999988876 8
Q ss_pred EEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCc
Q 004198 166 LVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQ 245 (769)
Q Consensus 166 l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~ 245 (769)
||++||.++...++++++||+.++ +|+.+.++ |.+|..|+++.. +++||++||.+... .+++++.||..++
T Consensus 162 iyv~GG~~~~~~~~~~~~~d~~~~--~W~~~~~~---p~~r~~~~~~~~-~~~i~v~GG~~~~~-~~~~v~~yd~~~~-- 232 (301)
T 2vpj_A 162 IYCLGGYDGLNILNSVEKYDPHTG--HWTNVTPM---ATKRSGAGVALL-NDHIYVVGGFDGTA-HLSSVEAYNIRTD-- 232 (301)
T ss_dssp EEEECCBCSSCBCCCEEEEETTTT--EEEEECCC---SSCCBSCEEEEE-TTEEEEECCBCSSS-BCCCEEEEETTTT--
T ss_pred EEEECCCCCCcccceEEEEeCCCC--cEEeCCCC---CcccccceEEEE-CCEEEEEeCCCCCc-ccceEEEEeCCCC--
Confidence 999999988888999999999999 99999655 888998888865 78999999987653 4899999999877
Q ss_pred eEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccCc
Q 004198 246 WEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLEL 325 (769)
Q Consensus 246 W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (769)
+|..++.. |.+|..|++++++++|||+||..... ..+++++||+++++|+.+..++.
T Consensus 233 -~W~~~~~~-p~~r~~~~~~~~~~~i~v~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~~~----------------- 289 (301)
T 2vpj_A 233 -SWTTVTSM-TTPRCYVGATVLRGRLYAIAGYDGNS----LLSSIECYDPIIDSWEVVTSMGT----------------- 289 (301)
T ss_dssp -EEEEECCC-SSCCBSCEEEEETTEEEEECCBCSSS----BEEEEEEEETTTTEEEEEEEEEE-----------------
T ss_pred -cEEECCCC-CCcccceeEEEECCEEEEEcCcCCCc----ccccEEEEcCCCCeEEEcCCCCc-----------------
Confidence 77777654 78999999999999999999976543 25789999999999999988754
Q ss_pred ccccceEEEEeC
Q 004198 326 MRRCRHASASIG 337 (769)
Q Consensus 326 ~~R~~hs~~~~~ 337 (769)
+|+.|+++++.
T Consensus 290 -~r~~~~~~~~~ 300 (301)
T 2vpj_A 290 -QRCDAGVCVLR 300 (301)
T ss_dssp -EEESCEEEEEE
T ss_pred -ccccceEEEeC
Confidence 99999999874
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-37 Score=350.95 Aligned_cols=221 Identities=29% Similarity=0.515 Sum_probs=197.3
Q ss_pred hHHHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecCC----EEEEccCCCCHHHHHHHHHHhC
Q 004198 529 GLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAP----VKVFGDLHGQFGDLMRLFDEYG 604 (769)
Q Consensus 529 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~----i~viGDiHG~~~~l~~~l~~~~ 604 (769)
..+++++..+.+.+ .+++.++..||.++.++|++||++++++.| ++||||||||+.+|.++|+..+
T Consensus 167 ~~l~~lie~l~~~~----------~l~e~~v~~L~~~a~eil~~e~~~~~~~~~~~~~~~vigDiHG~~~~l~~~l~~~~ 236 (477)
T 1wao_1 167 SFMKELMQWYKDQK----------KLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNG 236 (477)
T ss_dssp HHHHHHHHHHHTCC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECCCSSCEEEEECBCTTCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHccCCCeEEeecCCCcceEEEeCCCCCHHHHHHHHHHcC
Confidence 45678888887643 478999999999999999999999999988 9999999999999999999999
Q ss_pred CCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCCCchhhhH
Q 004198 605 FPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWT 684 (769)
Q Consensus 605 ~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~ 684 (769)
.++..+ .|||||||||||++|+||+.+|++||+++|.+|++||||||.+.++..|||..||..+|+. .+|+
T Consensus 237 ~~~~~~-----~~v~lGD~vdrG~~s~e~~~~l~~l~~~~~~~~~~lrGNHE~~~~~~~~g~~~~~~~~~~~----~~~~ 307 (477)
T 1wao_1 237 LPSETN-----PYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTA----QMYE 307 (477)
T ss_dssp CCBTTB-----CEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHHHHHHHHSCT----THHH
T ss_pred CCCCcC-----eEEEeccccCCCcchHHHHHHHHHHHhhCCCceEeecCCccHHHHhhhcChHHHHHHHhhH----HHHH
Confidence 886542 5999999999999999999999999999999999999999999999999999999999954 6999
Q ss_pred HHhHhhccccceEEEeceEEEEcCCC-CCCCCChHHhhhccCCcccCCCccceeceeccCCCCCc-ccccCcceEEeehh
Q 004198 685 RFNQLFNCLPLAALIEKKIICMHGGI-GRSIHSVEQIEKLERPITMDAGSIILMDLLWFVLNIST-ILRSMVLYIILFSL 762 (769)
Q Consensus 685 ~~~~~f~~lP~~~~i~~~i~~vHgGi-~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~~~-~~~~~~~~~~~~~~ 762 (769)
.+.++|++||++++++++++|||||+ +|...++++|+.+.||.+++.++ +++|+|||||.... +..+..+.+++||.
T Consensus 308 ~~~~~~~~lp~~~~~~~~~~~vHgg~~~~~~~~l~~i~~~~r~~~~~~~~-~~~dllWsdp~~~~~~~~~~rg~~~~fg~ 386 (477)
T 1wao_1 308 LFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSG-PMCDLLWSDPQPQNGRSISKRGVSCQFGP 386 (477)
T ss_dssp HHHHHHTTSCSEEEETTTEEECSSCCCSSSCCCHHHHHTCCCSSCCCSSS-HHHHHHHCEECSSSSCEECTTSSSEEECH
T ss_pred HHHHHhccCCcEEEEcCcEEEECCCCCccccCCHHHHHhccCCCCCchhh-hhhhhccCCCCccCCcCcCCCCCceeECH
Confidence 99999999999999999999999999 78888999999999998887665 89999999998653 33344566778999
Q ss_pred hhhhhcC
Q 004198 763 KIFISFI 769 (769)
Q Consensus 763 ~~~~~~~ 769 (769)
+...+|+
T Consensus 387 ~~~~~fl 393 (477)
T 1wao_1 387 DVTKAFL 393 (477)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9877763
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=327.37 Aligned_cols=281 Identities=17% Similarity=0.277 Sum_probs=230.7
Q ss_pred CCCcccccceeecCC-CCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEE
Q 004198 10 APSYRTLETYWDTDE-DAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWT 88 (769)
Q Consensus 10 ~~~y~~~~~~w~~~~-~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~ 88 (769)
..+||+.+++|...+ +.|.||.+|+++.+ +++||+|||........ .....+++++||+.+++|+
T Consensus 26 ~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~------~~~lyv~GG~~~~~~~~--------~~~~~~~~~~~d~~~~~W~ 91 (318)
T 2woz_A 26 AVAYDPMENECYLTALAEQIPRNHSSIVTQ------QNQVYVVGGLYVDEENK--------DQPLQSYFFQLDNVSSEWV 91 (318)
T ss_dssp EEEEETTTTEEEEEEECTTSCSSEEEEECS------SSCEEEEESSCC---------------CCCBEEEEEETTTTEEE
T ss_pred eEEECCCCCceecccCCccCCccceEEEEE------CCEEEEECCcccCcccc--------CCCccccEEEEeCCCCcEE
Confidence 357999999999832 22478999999988 89999999965322110 0013467999999999999
Q ss_pred EecCCCCCCcccccceEEEECCEEEEECccCC-CCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEE
Q 004198 89 RIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGP-AGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLV 167 (769)
Q Consensus 89 ~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~-~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~ 167 (769)
++++ .|.+|..|+++.++++||++||... ....++++|+||+.+ .+|+.+ +++|.+|++|++++.++ .||
T Consensus 92 ~~~~---~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~--~~W~~~---~~~p~~r~~~~~~~~~~-~iy 162 (318)
T 2woz_A 92 GLPP---LPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVA--AKWSEV---KNLPIKVYGHNVISHNG-MIY 162 (318)
T ss_dssp ECSC---BSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTT--TEEEEE---CCCSSCEESCEEEEETT-EEE
T ss_pred ECCC---CCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCC--CCEeEC---CCCCCcccccEEEEECC-EEE
Confidence 9865 4789999999999999999999863 556789999999999 779999 58999999999988776 999
Q ss_pred EEecCC-CCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCce
Q 004198 168 SVSGND-GKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQW 246 (769)
Q Consensus 168 v~GG~~-~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W 246 (769)
++||.+ ....++++|+||+.++ +|+.+.++ |.+|..|++++. +++||++||.+..+ .+++++.||..++
T Consensus 163 v~GG~~~~~~~~~~~~~yd~~~~--~W~~~~~~---p~~r~~~~~~~~-~~~iyv~GG~~~~~-~~~~~~~yd~~~~--- 232 (318)
T 2woz_A 163 CLGGKTDDKKCTNRVFIYNPKKG--DWKDLAPM---KTPRSMFGVAIH-KGKIVIAGGVTEDG-LSASVEAFDLKTN--- 232 (318)
T ss_dssp EECCEESSSCBCCCEEEEETTTT--EEEEECCC---SSCCBSCEEEEE-TTEEEEEEEEETTE-EEEEEEEEETTTC---
T ss_pred EEcCCCCCCCccceEEEEcCCCC--EEEECCCC---CCCcccceEEEE-CCEEEEEcCcCCCC-ccceEEEEECCCC---
Confidence 999974 4557899999999999 99999765 788999988764 78999999987653 5789999999877
Q ss_pred EEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCc-----ccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCC
Q 004198 247 EWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRA-----IEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDP 321 (769)
Q Consensus 247 ~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~-----~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~ 321 (769)
+|..++.. |.+|..|+++.++++|||+||....... ....+++++||+++++|+.+ ++.
T Consensus 233 ~W~~~~~~-p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~~~------------- 296 (318)
T 2woz_A 233 KWEVMTEF-PQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM--LKE------------- 296 (318)
T ss_dssp CEEECCCC-SSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE--ESC-------------
T ss_pred eEEECCCC-CCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh--ccc-------------
Confidence 78887654 7899999999999999999998642110 12367899999999999998 322
Q ss_pred ccCcccccceEEEEeCCEEEEEc
Q 004198 322 SLELMRRCRHASASIGVRIYIYG 344 (769)
Q Consensus 322 ~~~~~~R~~hs~~~~~~~iyv~G 344 (769)
+|+.|++++++++|||+.
T Consensus 297 -----~r~~~~~~~~~~~iyi~~ 314 (318)
T 2woz_A 297 -----IRYASGASCLATRLNLFK 314 (318)
T ss_dssp -----CGGGTTCEEEEEEEEGGG
T ss_pred -----ccccccceeeCCEEEEEE
Confidence 899999999999999975
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-35 Score=317.36 Aligned_cols=263 Identities=16% Similarity=0.214 Sum_probs=224.0
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECcc-----C
Q 004198 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGI-----G 119 (769)
Q Consensus 45 ~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~-----~ 119 (769)
.+.||+||| +++++||+.+++|+..+ . ..|.+|.+|+++.++++||++||. +
T Consensus 4 ~~~l~~~GG---------------------~~~~~yd~~~~~W~~~~-~-~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~ 60 (315)
T 4asc_A 4 QDLIFMISE---------------------EGAVAYDPAANECYCAS-L-SSQVPKNHVSLVTKENQVFVAGGLFYNEDN 60 (315)
T ss_dssp EEEEEEEET---------------------TEEEEEETTTTEEEEEE-C-CCCSCSSEEEEECTTCCEEEEEEEEECSSC
T ss_pred ceEEEEEcC---------------------CceEEECCCCCeEecCC-C-CCCCCccceEEEEECCEEEEEcCcccCCCC
Confidence 457999999 26999999999999732 2 236789999999999999999996 2
Q ss_pred CCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCC---CCCccCceeEEeCCCCCceEEEc
Q 004198 120 PAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGND---GKRVLSDAWALDTAQKPYVWQRL 196 (769)
Q Consensus 120 ~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~---~~~~~~dv~~~d~~~~~~~W~~v 196 (769)
......+++|+||+.+ .+|+.+ +++|.+|.+|+++++++ .||++||.+ +...++++|+||+.++ +|+++
T Consensus 61 ~~~~~~~~~~~~d~~~--~~W~~~---~~~p~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~~~~d~~~~--~W~~~ 132 (315)
T 4asc_A 61 KEDPMSAYFLQFDHLD--SEWLGM---PPLPSPRCLFGLGEALN-SIYVVGGREIKDGERCLDSVMCYDRLSF--KWGES 132 (315)
T ss_dssp SSSCEEEEEEEEETTT--TEEEEC---CCBSSCEESCEEEEETT-EEEEECCEESSTTCCBCCCEEEEETTTT--EEEEC
T ss_pred CccccccceEEecCCC--CeEEEC---CCCCcchhceeEEEECC-EEEEEeCCcCCCCCcccceEEEECCCCC--cEeEC
Confidence 2334457799999999 779998 58999999999998876 999999964 4668899999999999 99999
Q ss_pred CCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEEEec
Q 004198 197 NPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGG 276 (769)
Q Consensus 197 ~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG 276 (769)
.++ |.+|..|++++ .+++||++||.+.....+++++.||..++ +|..++.+ |.+|..|++++++++|||+||
T Consensus 133 ~~~---p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~---~W~~~~~~-p~~r~~~~~~~~~~~iyv~GG 204 (315)
T 4asc_A 133 DPL---PYVVYGHTVLS-HMDLVYVIGGKGSDRKCLNKMCVYDPKKF---EWKELAPM-QTARSLFGATVHDGRIIVAAG 204 (315)
T ss_dssp CCC---SSCCBSCEEEE-ETTEEEEECCBCTTSCBCCCEEEEETTTT---EEEECCCC-SSCCBSCEEEEETTEEEEEEE
T ss_pred CCC---CCcccceeEEE-ECCEEEEEeCCCCCCcccceEEEEeCCCC---eEEECCCC-CCchhceEEEEECCEEEEEec
Confidence 765 88899998887 57799999999666677999999999987 88888765 789999999999999999999
Q ss_pred ccCCCCcccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccCcccccceEEEEeCCEEEEEcCcCCC-------
Q 004198 277 ALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGD------- 349 (769)
Q Consensus 277 ~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~~~~iyv~GG~~~~------- 349 (769)
..... ..+++++||+++++|+.+..++. +|..|++++++++|||+||.++.
T Consensus 205 ~~~~~----~~~~~~~yd~~~~~W~~~~~~p~------------------~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~ 262 (315)
T 4asc_A 205 VTDTG----LTSSAEVYSITDNKWAPFEAFPQ------------------ERSSLSLVSLVGTLYAIGGFATLETESGEL 262 (315)
T ss_dssp ECSSS----EEEEEEEEETTTTEEEEECCCSS------------------CCBSCEEEEETTEEEEEEEEEEEECTTSCE
T ss_pred cCCCC----ccceEEEEECCCCeEEECCCCCC------------------cccceeEEEECCEEEEECCccccCcCCccc
Confidence 86543 25789999999999999987644 89999999999999999998542
Q ss_pred --ccccceEEecCCCCccccC
Q 004198 350 --ILLDDFLVAENSPFQSDVN 368 (769)
Q Consensus 350 --~~~~D~~~ld~~~~~~~~~ 368 (769)
..++|+|++|.++.+|...
T Consensus 263 ~~~~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 263 VPTELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp EEEEEEEEEEEETTTTEEEEE
T ss_pred cccccCcEEEecCCCChhhhh
Confidence 4689999999988777643
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-35 Score=314.65 Aligned_cols=271 Identities=17% Similarity=0.239 Sum_probs=226.9
Q ss_pred CCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccccceEEE
Q 004198 28 GPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAA 107 (769)
Q Consensus 28 ~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~ 107 (769)
.||.++... +.||+|||. ++++||+.+++|...+. ..|.+|..|+++.
T Consensus 7 ~~r~~~~~~---------~~i~~~GG~---------------------~~~~yd~~~~~W~~~~~--~~~~~r~~~~~~~ 54 (318)
T 2woz_A 7 IPRHGMFVK---------DLILLVNDT---------------------AAVAYDPMENECYLTAL--AEQIPRNHSSIVT 54 (318)
T ss_dssp SCCCCCSEE---------EEEEEECSS---------------------EEEEEETTTTEEEEEEE--CTTSCSSEEEEEC
T ss_pred cccccceec---------chhhhcccc---------------------ceEEECCCCCceecccC--CccCCccceEEEE
Confidence 567666543 379999992 37899999999998542 2457899999999
Q ss_pred ECCEEEEECccCC--C---CCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCC--CCCccCc
Q 004198 108 VGTMVVFQGGIGP--A---GHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGND--GKRVLSD 180 (769)
Q Consensus 108 ~~~~Iyv~GG~~~--~---~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~--~~~~~~d 180 (769)
+++.||++||... . ....+++|+||+.+ .+|+++ +++|.+|.+|+++++++ .||++||.+ +...+++
T Consensus 55 ~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~--~~W~~~---~~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~ 128 (318)
T 2woz_A 55 QQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVS--SEWVGL---PPLPSARCLFGLGEVDD-KIYVVAGKDLQTEASLDS 128 (318)
T ss_dssp SSSCEEEEESSCC-------CCCBEEEEEETTT--TEEEEC---SCBSSCBCSCEEEEETT-EEEEEEEEBTTTCCEEEE
T ss_pred ECCEEEEECCcccCccccCCCccccEEEEeCCC--CcEEEC---CCCCccccccceEEECC-EEEEEcCccCCCCcccce
Confidence 9999999999531 1 12345699999999 779999 58999999999998876 999999985 4567899
Q ss_pred eeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCccc
Q 004198 181 AWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRY 260 (769)
Q Consensus 181 v~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~ 260 (769)
+|+||+.++ +|+++.++ |.+|..|++++ .+++||++||.......+++++.||..++ +|..++.. |.+|.
T Consensus 129 ~~~yd~~~~--~W~~~~~~---p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~---~W~~~~~~-p~~r~ 198 (318)
T 2woz_A 129 VLCYDPVAA--KWSEVKNL---PIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKG---DWKDLAPM-KTPRS 198 (318)
T ss_dssp EEEEETTTT--EEEEECCC---SSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTT---EEEEECCC-SSCCB
T ss_pred EEEEeCCCC--CEeECCCC---CCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCC---EEEECCCC-CCCcc
Confidence 999999999 99999765 78899999887 68899999999766667899999999977 77777654 79999
Q ss_pred ceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccCcccccceEEEEeCCEE
Q 004198 261 QHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRI 340 (769)
Q Consensus 261 ~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~~~~i 340 (769)
.|++++++++|||+||..... ..+++++||+++++|+.+..++. +|..|++++++++|
T Consensus 199 ~~~~~~~~~~iyv~GG~~~~~----~~~~~~~yd~~~~~W~~~~~~p~------------------~r~~~~~~~~~~~i 256 (318)
T 2woz_A 199 MFGVAIHKGKIVIAGGVTEDG----LSASVEAFDLKTNKWEVMTEFPQ------------------ERSSISLVSLAGSL 256 (318)
T ss_dssp SCEEEEETTEEEEEEEEETTE----EEEEEEEEETTTCCEEECCCCSS------------------CCBSCEEEEETTEE
T ss_pred cceEEEECCEEEEEcCcCCCC----ccceEEEEECCCCeEEECCCCCC------------------cccceEEEEECCEE
Confidence 999999999999999986543 25789999999999999987644 89999999999999
Q ss_pred EEEcCcCCC---------ccccceEEecCCCCccccC
Q 004198 341 YIYGGLKGD---------ILLDDFLVAENSPFQSDVN 368 (769)
Q Consensus 341 yv~GG~~~~---------~~~~D~~~ld~~~~~~~~~ 368 (769)
||+||.+.. ..++|+|++|..+.+|...
T Consensus 257 ~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 257 YAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp EEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred EEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 999998752 4579999999998887654
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-35 Score=347.04 Aligned_cols=300 Identities=12% Similarity=0.119 Sum_probs=242.2
Q ss_pred ceeecCCCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEec-C--CC
Q 004198 18 TYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIR-P--AG 94 (769)
Q Consensus 18 ~~w~~~~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~-~--~g 94 (769)
.+|...+..|.+|++|+++ + +++||+|||... . ..+++++||+.+++|+.++ + .+
T Consensus 377 ~~~~~~~~~p~rr~g~~~~-~------~~~iyv~GG~~~--~-------------~~~~v~~yd~~~~~W~~~~~~~p~~ 434 (695)
T 2zwa_A 377 YQLLECECPINRKFGDVDV-A------GNDVFYMGGSNP--Y-------------RVNEILQLSIHYDKIDMKNIEVSSS 434 (695)
T ss_dssp EEEEECCCTTCCBSCEEEE-C------SSCEEEECCBSS--S-------------BCCCEEEEEECSSCEEEEECCCCCS
T ss_pred eeEeccCCCCCCceeEEEE-E------CCEEEEECCCCC--C-------------CcCcEEEEECCCCeEEEeccCCCCC
Confidence 4466667778889888766 6 889999999865 2 4789999999999999998 4 35
Q ss_pred CCCcccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecC
Q 004198 95 EPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGN 172 (769)
Q Consensus 95 ~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~ 172 (769)
..|.+|.+|+++++ +++|||+||.+.....++++|+||+.+ .+|+.+ +++|.+|++|+++++.++.|||+||.
T Consensus 435 ~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t--~~W~~~---~~~p~~R~~h~~~~~~~~~iyv~GG~ 509 (695)
T 2zwa_A 435 EVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKT--REWSMI---KSLSHTRFRHSACSLPDGNVLILGGV 509 (695)
T ss_dssp CCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTT--TEEEEC---CCCSBCCBSCEEEECTTSCEEEECCB
T ss_pred CCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCC--CcEEEC---CCCCCCcccceEEEEcCCEEEEECCC
Confidence 67899999999999 999999999876666789999999999 779999 58999999999998745699999998
Q ss_pred CCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEec-C-CEEEEEcccCCCC-CcccceEEEecCCCCce---
Q 004198 173 DGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARS-D-GMFLLCGGRDASG-APLADAYGLLMHRNGQW--- 246 (769)
Q Consensus 173 ~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~-~-g~l~v~GG~~~~~-~~l~d~~~ld~~~~~~W--- 246 (769)
+... ++|+||+.++ +|+.+.+.+..|.+|..|+++++. + ++||++||....+ ..++++|.|+..++ +|
T Consensus 510 ~~~~---~v~~yd~~t~--~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~-~w~~~ 583 (695)
T 2zwa_A 510 TEGP---AMLLYNVTEE--IFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE-NATEP 583 (695)
T ss_dssp CSSC---SEEEEETTTT--EEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT-CSSCC
T ss_pred CCCC---CEEEEECCCC--ceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCC-ccccc
Confidence 7765 9999999999 999999877789999999977643 3 7999999997654 56899999999876 33
Q ss_pred -EEEeCCCCCCCcccceEEEEeC-CEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccC
Q 004198 247 -EWTLAPGVAPSPRYQHAAVFVG-ARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLE 324 (769)
Q Consensus 247 -~W~~~~~~~P~~R~~hs~~~~~-~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~ 324 (769)
+|..+...++.+|++|++++++ ++|||+||...... ....+++++||+.+++|+.+....... ..+
T Consensus 584 ~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~-~~~~~~v~~yd~~t~~W~~~~~p~~~~-----------~~~ 651 (695)
T 2zwa_A 584 ITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGL-FDRTNSIISLDPLSETLTSIPISRRIW-----------EDH 651 (695)
T ss_dssp EEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCC-CCTTTSEEEEETTTTEEEECCCCHHHH-----------HHS
T ss_pred eEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCC-CCCCCeEEEEECCCCeEEEeecccccc-----------CCC
Confidence 4777765556899999999999 99999999865432 124688999999999999654321100 001
Q ss_pred cccccceEEEEeCC-EEEEEcCcC----CCccccceEEecCCC
Q 004198 325 LMRRCRHASASIGV-RIYIYGGLK----GDILLDDFLVAENSP 362 (769)
Q Consensus 325 ~~~R~~hs~~~~~~-~iyv~GG~~----~~~~~~D~~~ld~~~ 362 (769)
+..+.+|+++.+++ +|||+||.. -..+++++|.||+..
T Consensus 652 ~p~~~gh~~~~~~~g~i~v~GGg~~cfsfGt~~n~i~~ldl~~ 694 (695)
T 2zwa_A 652 SLMLAGFSLVSTSMGTIHIIGGGATCYGFGSVTNVGLKLIAIA 694 (695)
T ss_dssp CCCCSSCEEECC---CEEEECCEEECTTSCEEECCCEEEEECC
T ss_pred CccceeeeEEEeCCCEEEEEeCCccCcCccccccceEEEEEEc
Confidence 12678899999887 999999953 346778999998764
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.7e-31 Score=291.84 Aligned_cols=262 Identities=19% Similarity=0.251 Sum_probs=202.2
Q ss_pred CCcccc--cceeecCCCCC-CCccccEEEEecccCCCCCEEEEEcCCCC-CCCCCCCCCCCccccccCCcEEEEECCCCc
Q 004198 11 PSYRTL--ETYWDTDEDAP-GPRCGHTLTAVAATKTTGPRLILFGGATA-IEGGATSSAPGIRLAGVTNSVHLYDVLTRK 86 (769)
Q Consensus 11 ~~y~~~--~~~w~~~~~~P-~~R~ght~~~v~~~~~~~~~lyl~GG~~~-~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~ 86 (769)
-.||+. +++|...+++| .||.+|+++++ +++||||||... ..+. ....+++++||+.+++
T Consensus 34 ~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~------~~~lyv~GG~~~~~~~~----------~~~~~~v~~yd~~~~~ 97 (357)
T 2uvk_A 34 YKLDTQAKDKKWTALAAFPGGPRDQATSAFI------DGNLYVFGGIGKNSEGL----------TQVFNDVHKYNPKTNS 97 (357)
T ss_dssp EEEETTSSSCCEEECCCCTTCCCBSCEEEEE------TTEEEEECCEEECTTSC----------EEECCCEEEEETTTTE
T ss_pred EEEccccCCCCeeECCCCCCCcCccceEEEE------CCEEEEEcCCCCCCCcc----------ceeeccEEEEeCCCCc
Confidence 368887 48999999999 89999999999 899999999822 1110 1257999999999999
Q ss_pred EEEecCCCCCCcccccceEEEECCEEEEECccCCCC---------------------------------CCcCcEEEEEc
Q 004198 87 WTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAG---------------------------------HSTDDLYVLDL 133 (769)
Q Consensus 87 W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~---------------------------------~~~~dl~~~d~ 133 (769)
|++++++. |.+|.+|++++++++||++||.+... ..++++++||+
T Consensus 98 W~~~~~~~--p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 175 (357)
T 2uvk_A 98 WVKLMSHA--PMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDP 175 (357)
T ss_dssp EEECSCCC--SSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEET
T ss_pred EEECCCCC--CcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeC
Confidence 99998874 68999999999999999999975321 24689999999
Q ss_pred cCCcceEEEeeecCCCCCCc-cccEEEEECCcEEEEEecCCCC-CccCceeEEeC--CCCCceEEEcCCCCCCCCccccc
Q 004198 134 TNDKFKWHRVVVQGQGPGPR-YGHVMDLVSQRYLVSVSGNDGK-RVLSDAWALDT--AQKPYVWQRLNPEGDRPSARMYA 209 (769)
Q Consensus 134 ~t~~~~W~~~~~~g~~p~~R-~~hs~~~~~~~~l~v~GG~~~~-~~~~dv~~~d~--~~~~~~W~~v~~~~~~P~~r~~h 209 (769)
.+ .+|+.+. ++|.+| .+|+++++++ .|||+||.+.. ...+++|+||+ +++ +|+.+..+ ..|..|..|
T Consensus 176 ~~--~~W~~~~---~~p~~~~~~~~~~~~~~-~iyv~GG~~~~~~~~~~v~~~d~d~~~~--~W~~~~~~-~~~~~~~~~ 246 (357)
T 2uvk_A 176 ST--QQWSYAG---ESPWYGTAGAAVVNKGD-KTWLINGEAKPGLRTDAVFELDFTGNNL--KWNKLAPV-SSPDGVAGG 246 (357)
T ss_dssp TT--TEEEEEE---ECSSCCCBSCEEEEETT-EEEEECCEEETTEECCCEEEEECC---C--EEEECCCS-STTTCCBSC
T ss_pred CC--CcEEECC---CCCCCCcccccEEEECC-EEEEEeeecCCCcccCceEEEEecCCCC--cEEecCCC-CCCcccccc
Confidence 99 7799994 677654 5588888876 99999997653 35789999987 777 99999876 223445566
Q ss_pred EEEEecCCEEEEEcccCCC----------------CCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEE
Q 004198 210 TASARSDGMFLLCGGRDAS----------------GAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHV 273 (769)
Q Consensus 210 sa~~~~~g~l~v~GG~~~~----------------~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V 273 (769)
++++ .+++||++||.+.. ...+++++.||..++ +|..+.. .|.+|..|+++.++++|||
T Consensus 247 ~~~~-~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~---~W~~~~~-~p~~r~~~~~~~~~~~i~v 321 (357)
T 2uvk_A 247 FAGI-SNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNG---KWDKSGE-LSQGRAYGVSLPWNNSLLI 321 (357)
T ss_dssp EEEE-ETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC------CEEEEE-CSSCCBSSEEEEETTEEEE
T ss_pred eEEE-ECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCC---ceeeCCC-CCCCcccceeEEeCCEEEE
Confidence 6665 57799999997532 123578999999866 6666644 4789999999999999999
Q ss_pred EecccCCCCcccCCCcEEEEECCCCcEEeccCCc
Q 004198 274 TGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLV 307 (769)
Q Consensus 274 ~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~ 307 (769)
+||.+..+. ..+++++|+.++++|.+....+
T Consensus 322 ~GG~~~~~~---~~~~v~~l~~~~~~~~~~~~~~ 352 (357)
T 2uvk_A 322 IGGETAGGK---AVTDSVLITVKDNKVTVQNLEH 352 (357)
T ss_dssp EEEECGGGC---EEEEEEEEEC-CCSCEEEC---
T ss_pred EeeeCCCCC---EeeeEEEEEEcCcEeEeeeccc
Confidence 999865442 2578999999999999987764
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-28 Score=290.43 Aligned_cols=288 Identities=14% Similarity=0.095 Sum_probs=215.2
Q ss_pred CCCcccccceeecCCCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEE
Q 004198 10 APSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTR 89 (769)
Q Consensus 10 ~~~y~~~~~~w~~~~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~ 89 (769)
.+.||+.++.|....++ ||.+|++++++. +++||++||........ ......++++||+.+++|+.
T Consensus 168 ~~~~dp~~~~W~~~~~~--P~~~~~~av~~~----~g~l~v~GG~~~~~~~~--------~~~~~~~~~~yd~~t~~w~~ 233 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDL--PIVPAAAAIEPT----SGRVLMWSSYRNDAFGG--------SPGGITLTSSWDPSTGIVSD 233 (656)
T ss_dssp CCCCCTTSCEEEEEEEC--SSCCSEEEEETT----TTEEEEEEECCCTTTCS--------CCCSEEEEEEECTTTCCBCC
T ss_pred cccCCCCCCeeeeeccC--CCCceeEEEEec----CCEEEEEeccccccccc--------CCCCeEEEEEEeCCCCcEEe
Confidence 67899999999988765 456677776632 67999999986532110 00124579999999999998
Q ss_pred ecCCCCCCcccccce--EEE-ECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEE
Q 004198 90 IRPAGEPPSPRAAHA--AAA-VGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYL 166 (769)
Q Consensus 90 l~~~g~~P~~R~~hs--~~~-~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l 166 (769)
+..+ |.+|..|+ ++. .+++||++||.... ++++||+.+ .+|+++ .++|.+|.+|+++++.+++|
T Consensus 234 ~~~~---~~~~~~~~~~~~~~~~g~lyv~GG~~~~-----~v~~yd~~t--~~W~~~---~~~~~~R~~~s~~~~~dg~i 300 (656)
T 1k3i_A 234 RTVT---VTKHDMFCPGISMDGNGQIVVTGGNDAK-----KTSLYDSSS--DSWIPG---PDMQVARGYQSSATMSDGRV 300 (656)
T ss_dssp CEEE---ECSCCCSSCEEEECTTSCEEEECSSSTT-----CEEEEEGGG--TEEEEC---CCCSSCCSSCEEEECTTSCE
T ss_pred Cccc---CCCCCCccccccCCCCCCEEEeCCCCCC-----ceEEecCcC--CceeEC---CCCCccccccceEEecCCeE
Confidence 8654 55666654 333 57899999997432 799999999 779999 58999999999988855599
Q ss_pred EEEec-CCCCCccCceeEEeCCCCCceEEEcCCCCCC-------------------------------------------
Q 004198 167 VSVSG-NDGKRVLSDAWALDTAQKPYVWQRLNPEGDR------------------------------------------- 202 (769)
Q Consensus 167 ~v~GG-~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~------------------------------------------- 202 (769)
|++|| .++...++++++||+.++ +|+.+...+..
T Consensus 301 yv~GG~~~~~~~~~~~e~yd~~t~--~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~ 378 (656)
T 1k3i_A 301 FTIGGSWSGGVFEKNGEVYSPSSK--TWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSG 378 (656)
T ss_dssp EEECCCCCSSSCCCCEEEEETTTT--EEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECST
T ss_pred EEEeCcccCCcccccceEeCCCCC--cceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCC
Confidence 99999 566778899999999999 99997322100
Q ss_pred ----------------CCcccccEEEE--ecCCEEEEEcccCCC--CCccc---ceEEEecCCCCceEEEeCC-CCCCCc
Q 004198 203 ----------------PSARMYATASA--RSDGMFLLCGGRDAS--GAPLA---DAYGLLMHRNGQWEWTLAP-GVAPSP 258 (769)
Q Consensus 203 ----------------P~~r~~hsa~~--~~~g~l~v~GG~~~~--~~~l~---d~~~ld~~~~~~W~W~~~~-~~~P~~ 258 (769)
++++..|++++ ..+++||++||.+.. ...++ +++.||..++ +|.... +.+|.+
T Consensus 379 ~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~---~W~~~~~~~mp~~ 455 (656)
T 1k3i_A 379 SGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTS---PNTVFASNGLYFA 455 (656)
T ss_dssp TCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSC---CEEEECTTCCSSC
T ss_pred cceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCC---CeeEEccCCCCCC
Confidence 11223455554 358999999997532 12344 6777887755 555544 456899
Q ss_pred ccceEEEEe-CCEEEEEecccCCCC--cccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccCcccccceEEEE
Q 004198 259 RYQHAAVFV-GARLHVTGGALRGGR--AIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASAS 335 (769)
Q Consensus 259 R~~hs~~~~-~~~i~V~GG~~~~~~--~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~ 335 (769)
|..|+++++ +++|||+||...... ......++++||+++++|+.+..++. +|..|++++
T Consensus 456 R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~------------------~R~~hs~a~ 517 (656)
T 1k3i_A 456 RTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSI------------------VRVYHSISL 517 (656)
T ss_dssp CBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSS------------------CCCTTEEEE
T ss_pred cccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCC------------------ccccccHhh
Confidence 999999988 999999999763311 12236789999999999999887744 999999988
Q ss_pred e--CCEEEEEcCcC
Q 004198 336 I--GVRIYIYGGLK 347 (769)
Q Consensus 336 ~--~~~iyv~GG~~ 347 (769)
+ +++|||+||..
T Consensus 518 ll~dg~v~v~GG~~ 531 (656)
T 1k3i_A 518 LLPDGRVFNGGGGL 531 (656)
T ss_dssp ECTTSCEEEEECCC
T ss_pred cCCCcEEEecCCCC
Confidence 8 99999999964
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=9.5e-28 Score=284.92 Aligned_cols=235 Identities=16% Similarity=0.204 Sum_probs=196.3
Q ss_pred CCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEee-e--cCCCCCCccccEEEEEC-CcEEEEEec
Q 004198 96 PPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVV-V--QGQGPGPRYGHVMDLVS-QRYLVSVSG 171 (769)
Q Consensus 96 ~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~-~--~g~~p~~R~~hs~~~~~-~~~l~v~GG 171 (769)
.|.+|++|++ ++++.||++||.+. ...+++|+||+.+ .+|+.+. . .+.+|.+|++|+++++. ++.|||+||
T Consensus 385 ~p~rr~g~~~-~~~~~iyv~GG~~~--~~~~~v~~yd~~~--~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG 459 (695)
T 2zwa_A 385 PINRKFGDVD-VAGNDVFYMGGSNP--YRVNEILQLSIHY--DKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGG 459 (695)
T ss_dssp TTCCBSCEEE-ECSSCEEEECCBSS--SBCCCEEEEEECS--SCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECC
T ss_pred CCCCceeEEE-EECCEEEEECCCCC--CCcCcEEEEECCC--CeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcC
Confidence 4566666554 48999999999866 6789999999999 6799997 3 35689999999999993 459999999
Q ss_pred CCCCC-ccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEe
Q 004198 172 NDGKR-VLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTL 250 (769)
Q Consensus 172 ~~~~~-~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~ 250 (769)
.+... .++++|+||+.++ +|+++.++ |.+|..|+++++.+++||++||.+... +++.||..++ +|..
T Consensus 460 ~~~~~~~~~dv~~yd~~t~--~W~~~~~~---p~~R~~h~~~~~~~~~iyv~GG~~~~~----~v~~yd~~t~---~W~~ 527 (695)
T 2zwa_A 460 RKAPHQGLSDNWIFDMKTR--EWSMIKSL---SHTRFRHSACSLPDGNVLILGGVTEGP----AMLLYNVTEE---IFKD 527 (695)
T ss_dssp BSSTTCBCCCCEEEETTTT--EEEECCCC---SBCCBSCEEEECTTSCEEEECCBCSSC----SEEEEETTTT---EEEE
T ss_pred CCCCCCccccEEEEeCCCC--cEEECCCC---CCCcccceEEEEcCCEEEEECCCCCCC----CEEEEECCCC---ceEE
Confidence 87754 7899999999999 99999765 889999999987789999999997654 9999999977 6666
Q ss_pred CCC--CCCCcccceEEEEeC---CEEEEEecccCCCCcccCCCcEEEEECCCCc------EEeccCCccCCCCCCCCCCC
Q 004198 251 APG--VAPSPRYQHAAVFVG---ARLHVTGGALRGGRAIEGEAAVAVLDTAAGV------WLDRNGLVTSSRTSKGHGEH 319 (769)
Q Consensus 251 ~~~--~~P~~R~~hs~~~~~---~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~------W~~~~~~~~~~~~~~~~~~~ 319 (769)
++. ..|.+|++|++++++ ++|||+||....+. ...+++++||+.+++ |+.+..++
T Consensus 528 ~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~--~~~~~v~~yd~~~~~w~~~~~W~~~~~~p------------ 593 (695)
T 2zwa_A 528 VTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQT--TVSDKAIIFKYDAENATEPITVIKKLQHP------------ 593 (695)
T ss_dssp CCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSS--CBCCEEEEEEECTTCSSCCEEEEEEEECG------------
T ss_pred ccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCC--eeeCcEEEEEccCCccccceEEEEcCCCC------------
Confidence 653 468899999988876 89999999865431 236889999999999 88887642
Q ss_pred CCccCcccccceEEEEeC-CEEEEEcCcCCC---ccccceEEecCCCCccc
Q 004198 320 DPSLELMRRCRHASASIG-VRIYIYGGLKGD---ILLDDFLVAENSPFQSD 366 (769)
Q Consensus 320 ~~~~~~~~R~~hs~~~~~-~~iyv~GG~~~~---~~~~D~~~ld~~~~~~~ 366 (769)
+.+|++|++++++ ++|||+||.++. ...++++++|..+.+|.
T Consensus 594 -----~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 594 -----LFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLT 639 (695)
T ss_dssp -----GGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEE
T ss_pred -----CCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEE
Confidence 2389999999999 999999998765 36899999999988766
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A | Back alignment and structure |
|---|
Probab=99.92 E-value=3.2e-26 Score=248.02 Aligned_cols=174 Identities=20% Similarity=0.235 Sum_probs=133.8
Q ss_pred HhcCCceeeecCCEEEEccCCCCHHHHHHHHHHhCCCCCCCCC--cceeEEEeccccCCCCChHHHHHHHHHhhh---cC
Q 004198 570 FMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDI--TYIDYLFLGDYVDRGQHSLETITLLLALKI---EY 644 (769)
Q Consensus 570 ~~~e~~~l~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~--~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~---~~ 644 (769)
|++|+++++...+++|||||||++.+|.++|+..++++.+..+ ....+||||||||||++|+||+.+|++|+. ++
T Consensus 60 ~~~~~~~~~~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~evl~~l~~l~~~~~~~ 139 (342)
T 2z72_A 60 KQIMPDTYLGIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWFMYQLDQQARDA 139 (342)
T ss_dssp TSCCCSEECCCCEEEEECCCTTCHHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHHHHHHHHHHHHHHHHT
T ss_pred cccCcceecCCCCEEEEECCCCCHHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHHHHHHHHHHHHHHHhhC
Confidence 7899999999999999999999999999999999876532111 112799999999999999999999999986 79
Q ss_pred CCceEEecCCcchhhhhhcc----CCHHHHHHHhCCCCchhhhH---HHhHhhccccceEEEeceEEEEcCCCCCCCC--
Q 004198 645 PENVHLIRGNHEAADINALF----GFRLECIERMGENDGIWAWT---RFNQLFNCLPLAALIEKKIICMHGGIGRSIH-- 715 (769)
Q Consensus 645 p~~v~llrGNHE~~~~~~~~----g~~~e~~~~~~~~~~~~~~~---~~~~~f~~lP~~~~i~~~i~~vHgGi~~~~~-- 715 (769)
|.++++||||||.+.++..+ ..+....+.+... ...+|. ...++|+.||++++++ +++|||||++|.+.
T Consensus 140 ~~~v~~v~GNHE~~~l~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~L~~lP~~~~~~-~~~~vHgGl~p~~~~~ 217 (342)
T 2z72_A 140 GGMVHLLMGNHEQMVLGGDLRYVHQRYDIATTLINRP-YNKLYSADTEIGQWLRSKNTIIKIN-DVLYMHGGISSEWISR 217 (342)
T ss_dssp TCEEEECCCHHHHHHHHTCCTTSCTTHHHHHHHTTSC-GGGGGSTTBHHHHHHHTCCSEEEET-TEEEESSCCCHHHHHT
T ss_pred CCeEEEEecCCcHHHhhCcccccccccchHHHHhccc-HHHHHHHhHHHHHHHhhCCeEEEEC-CEEEEECCCChhhccc
Confidence 99999999999999886421 1222222223221 234543 4567788889999996 79999999999764
Q ss_pred --ChHHhhhccCCccc-----CCCccceeceeccCCCC
Q 004198 716 --SVEQIEKLERPITM-----DAGSIILMDLLWFVLNI 746 (769)
Q Consensus 716 --~~~~i~~~~rp~~~-----~~~~~~~~dllWsdp~~ 746 (769)
++++|+.+.|+... +.+ ..++++|||||.+
T Consensus 218 ~~~l~~i~~~~r~~~~~~~~~~~~-~~~~~~lwsd~~~ 254 (342)
T 2z72_A 218 ELTLDKANALYRANVDASKKSLKA-DDLLNFLFFGNGP 254 (342)
T ss_dssp TCCHHHHHHHHHHHTTSCHHHHHH-SHHHHHHHSTTST
T ss_pred CCCHHHHHHHhhhhcccccccccc-CHHHHhccCCCCC
Confidence 89999988776321 111 2568999999865
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.8e-23 Score=247.32 Aligned_cols=250 Identities=13% Similarity=0.128 Sum_probs=190.5
Q ss_pred CCCcccccceeecCCCCCCCccccE--EEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcE
Q 004198 10 APSYRTLETYWDTDEDAPGPRCGHT--LTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKW 87 (769)
Q Consensus 10 ~~~y~~~~~~w~~~~~~P~~R~ght--~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W 87 (769)
.-.||+.+++|...+.+|.+|..|+ ++++ .+++||++||... .++++||+.+++|
T Consensus 221 ~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~-----~~g~lyv~GG~~~------------------~~v~~yd~~t~~W 277 (656)
T 1k3i_A 221 TSSWDPSTGIVSDRTVTVTKHDMFCPGISMD-----GNGQIVVTGGNDA------------------KKTSLYDSSSDSW 277 (656)
T ss_dssp EEEECTTTCCBCCCEEEECSCCCSSCEEEEC-----TTSCEEEECSSST------------------TCEEEEEGGGTEE
T ss_pred EEEEeCCCCcEEeCcccCCCCCCccccccCC-----CCCCEEEeCCCCC------------------CceEEecCcCCce
Confidence 4579999999999999998887664 3333 1789999999641 3799999999999
Q ss_pred EEecCCCCCCcccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecC--CCCC-------------
Q 004198 88 TRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQG--QGPG------------- 151 (769)
Q Consensus 88 ~~l~~~g~~P~~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g--~~p~------------- 151 (769)
+++.. +|.+|..|+++.+ +++||++||........+++++||+.+ .+|+.++..+ +++.
T Consensus 278 ~~~~~---~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t--~~W~~~~~~~~~p~~~~~~~~~~~~~~~i 352 (656)
T 1k3i_A 278 IPGPD---MQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS--KTWTSLPNAKVNPMLTADKQGLYRSDNHA 352 (656)
T ss_dssp EECCC---CSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTT--TEEEEETTSCSGGGCCCCTTGGGTTTCSC
T ss_pred eECCC---CCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCC--CcceeCCCccccccccccccceeecCCce
Confidence 99864 4789999999999 899999999655555789999999999 6799873110 1111
Q ss_pred --------------------------------------------CccccEEEEE--CCcEEEEEecCCC---CCccC---
Q 004198 152 --------------------------------------------PRYGHVMDLV--SQRYLVSVSGNDG---KRVLS--- 179 (769)
Q Consensus 152 --------------------------------------------~R~~hs~~~~--~~~~l~v~GG~~~---~~~~~--- 179 (769)
++..++++++ .+++||++||.+. ...++
T Consensus 353 yv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~ 432 (656)
T 1k3i_A 353 WLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAH 432 (656)
T ss_dssp CEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEE
T ss_pred EEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcce
Confidence 1223444442 3559999999643 33455
Q ss_pred ceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCC-----CCcccceEEEecCCCCceEEEeCCCC
Q 004198 180 DAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDAS-----GAPLADAYGLLMHRNGQWEWTLAPGV 254 (769)
Q Consensus 180 dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~-----~~~l~d~~~ld~~~~~~W~W~~~~~~ 254 (769)
++++||+.++ +|..+. .+.+|.+|..|++++..+++||++||.+.. ...+++++.||..++ +|..+..+
T Consensus 433 ~v~~yd~~~~--~W~~~~-~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~---~W~~~~~~ 506 (656)
T 1k3i_A 433 IITLGEPGTS--PNTVFA-SNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD---TFYKQNPN 506 (656)
T ss_dssp EEECCSTTSC--CEEEEC-TTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT---EEEECCCC
T ss_pred EEEcCCCCCC--CeeEEc-cCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCC---ceeecCCC
Confidence 7889999998 899886 234589999999998889999999997532 245789999999877 78887655
Q ss_pred CCCcccceEEEEe--CCEEEEEecccCCCCcccCCCcEEEEEC
Q 004198 255 APSPRYQHAAVFV--GARLHVTGGALRGGRAIEGEAAVAVLDT 295 (769)
Q Consensus 255 ~P~~R~~hs~~~~--~~~i~V~GG~~~~~~~~~~~~~v~~yd~ 295 (769)
|.+|..|+++++ +++|||+||..+... ....-++++|.+
T Consensus 507 -~~~R~~hs~a~ll~dg~v~v~GG~~~~~~-~~~~~~~e~~~P 547 (656)
T 1k3i_A 507 -SIVRVYHSISLLLPDGRVFNGGGGLCGDC-TTNHFDAQIFTP 547 (656)
T ss_dssp -SSCCCTTEEEEECTTSCEEEEECCCCTTC-SCCCCEEEEEEC
T ss_pred -CCccccccHhhcCCCcEEEecCCCCCCCC-CCCeeEEEEEeC
Confidence 799999999988 999999999654332 122345667766
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.90 E-value=9.6e-25 Score=229.34 Aligned_cols=150 Identities=21% Similarity=0.349 Sum_probs=120.0
Q ss_pred CEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhh
Q 004198 582 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADIN 661 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~ 661 (769)
+++||||||||+.+|.++|+.+++++..+ .+||+|||||||++|+||+.+|+++. .++++||||||.+.++
T Consensus 2 ~i~vigDiHG~~~~l~~ll~~~~~~~~~d-----~~v~lGD~vdrG~~s~~~l~~l~~l~----~~~~~v~GNHe~~~l~ 72 (280)
T 2dfj_A 2 ATYLIGDVHGCYDELIALLHKVEFTPGKD-----TLWLTGDLVARGPGSLDVLRYVKSLG----DSVRLVLGNHDLHLLA 72 (280)
T ss_dssp CEEEECCCCSCHHHHHHHHHHTTCCTTTC-----EEEECSCCSSSSSCHHHHHHHHHHTG----GGEEECCCHHHHHHHH
T ss_pred eEEEEecCCCCHHHHHHHHHHhCCCCCCC-----EEEEeCCcCCCCCccHHHHHHHHhCC----CceEEEECCCcHHHHh
Confidence 48999999999999999999999843321 79999999999999999999999873 5899999999999999
Q ss_pred hccCCHHHHH----HHhCCCCchhhhHHHhHhhccccceEEEec-eEEEEcCCCCCCCCChHHhhhccCCcc----cCCC
Q 004198 662 ALFGFRLECI----ERMGENDGIWAWTRFNQLFNCLPLAALIEK-KIICMHGGIGRSIHSVEQIEKLERPIT----MDAG 732 (769)
Q Consensus 662 ~~~g~~~e~~----~~~~~~~~~~~~~~~~~~f~~lP~~~~i~~-~i~~vHgGi~~~~~~~~~i~~~~rp~~----~~~~ 732 (769)
..+||..+.. ..+. ....+..+.++|+.||+++.+++ +++|||||++|.+ ++++++.+.|+.+ .+..
T Consensus 73 ~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHaGi~p~~-~l~~~~~~~r~~e~~l~~~~~ 148 (280)
T 2dfj_A 73 VFAGISRNKPKDRLTPLL---EAPDADELLNWLRRQPLLQIDEEKKLVMAHAGITPQW-DLQTAKECARDVEAVLSSDSY 148 (280)
T ss_dssp HHTTSSCCCGGGCCHHHH---TSTTHHHHHHHHHTSCSEEEETTTTEEEESSCCCTTC-CHHHHHHHHHHHHHHHHSTTH
T ss_pred HhcCCcccchhhhHHHHh---hhhHHHHHHHHHHhCCcEEEECCCeEEEEeCCCCcCc-CHHHHHHHHHHHHHhhcCCcH
Confidence 8888753210 0110 01234567788999999998887 8999999999998 7999888877664 2222
Q ss_pred ccceeceeccCCC
Q 004198 733 SIILMDLLWFVLN 745 (769)
Q Consensus 733 ~~~~~dllWsdp~ 745 (769)
..++|+||+||.
T Consensus 149 -~~~~~~l~~d~~ 160 (280)
T 2dfj_A 149 -PFFLDAMYGDMP 160 (280)
T ss_dssp -HHHHHHTTCSCC
T ss_pred -HHHHHHhcCCCC
Confidence 257899999996
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.85 E-value=1e-21 Score=205.03 Aligned_cols=185 Identities=17% Similarity=0.220 Sum_probs=124.7
Q ss_pred HHHhcCCceeeecCCEEEEccCCCCHHHHHHHHHHhCCCCC-CCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCC
Q 004198 568 QIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPST-AGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPE 646 (769)
Q Consensus 568 ~~~~~e~~~l~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~-~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~ 646 (769)
.+|.+++.++++..+|+|||||||++.+|.++|+.++..+. + .+||+|||||||+++.|++.+|+.+
T Consensus 6 ~~~~~~~~l~~~~~~i~visDiHg~~~~l~~~l~~~~~~~~~d------~ii~~GD~vd~g~~~~~~l~~l~~~------ 73 (262)
T 2qjc_A 6 QGYANVVTLPNVTGRVIIVGDIHGCRAQLEDLLRAVSFKQGSD------TLVAVGDLVNKGPDSFGVVRLLKRL------ 73 (262)
T ss_dssp --CCCEEECTTCCSCEEEECCCTTCHHHHHHHHHHHTCCTTTS------EEEECSCCSSSSSCHHHHHHHHHHH------
T ss_pred cccCChhhhcCCCCeEEEEeCCCCCHHHHHHHHHHHhccCCCC------EEEEecCCCCCCCCHHHHHHHHHHC------
Confidence 46778888988888999999999999999999999987653 3 7999999999999999999999864
Q ss_pred ceEEecCCcchhhhhhccCCHHH-HHHHhCCCCc-----hhhhHHHhHhhccccceEEEe-ceEEEEcCCCCCCCC----
Q 004198 647 NVHLIRGNHEAADINALFGFRLE-CIERMGENDG-----IWAWTRFNQLFNCLPLAALIE-KKIICMHGGIGRSIH---- 715 (769)
Q Consensus 647 ~v~llrGNHE~~~~~~~~g~~~e-~~~~~~~~~~-----~~~~~~~~~~f~~lP~~~~i~-~~i~~vHgGi~~~~~---- 715 (769)
.+++|+||||...++..+++..+ +..+++.... ..+.....++|+.||+++.++ .+++|||||+.|.+.
T Consensus 74 ~~~~v~GNHd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lP~~~~i~~~~i~~vHgg~~p~~~~~~~ 153 (262)
T 2qjc_A 74 GAYSVLGNHDAKLLKLVKKLGKKECLKGRDAKSSLAPLAQSIPTDVETYLSQLPHIIRIPAHNVMVAHAGLHPQRPVDRQ 153 (262)
T ss_dssp TCEECCCHHHHHHHHHHHCC-------------CHHHHHHHCCHHHHHHHHTCCSEEEEGGGTEEEESSCCCTTSCGGGC
T ss_pred CCEEEeCcChHHHHhhhcCCCccccccccchHHHHHHHHhhhhHHHHHHHHcCCcEEEECCCcEEEEECCCCCCCCcccC
Confidence 59999999999998887777654 3334432211 123356778899999999886 589999999998763
Q ss_pred ChHHhhhc---cCCcccCCCccceeceeccCCCCC---cccccCcc-eEEeehhhhhhh
Q 004198 716 SVEQIEKL---ERPITMDAGSIILMDLLWFVLNIS---TILRSMVL-YIILFSLKIFIS 767 (769)
Q Consensus 716 ~~~~i~~~---~rp~~~~~~~~~~~dllWsdp~~~---~~~~~~~~-~~~~~~~~~~~~ 767 (769)
..+++..+ .++...+..+ ..++|+||... .+.....+ ...+||+.....
T Consensus 154 ~~~~l~~ir~~~~~~~~~~~G---~~~~~~d~~~~~~~~w~~~~~g~~~vvfGHt~~~~ 209 (262)
T 2qjc_A 154 YEDEVTTMRNLIEKEQEATGG---VTLTATEETNDGGKPWASMWRGPETVVFGHDARRG 209 (262)
T ss_dssp CHHHHHHCCEEEEC----------CCEEEESCSTTCCEEGGGGCCCSSEEEECCCGGGC
T ss_pred CHHHHhhhhhcccccccCCCC---ccccccCCCCcCCCChhhccCCCCEEEECCCcccc
Confidence 23333333 2222211222 24889998432 23322222 335788765543
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.8e-18 Score=175.85 Aligned_cols=141 Identities=26% Similarity=0.351 Sum_probs=101.3
Q ss_pred CCEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhh
Q 004198 581 APVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADI 660 (769)
Q Consensus 581 ~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~ 660 (769)
.+++|||||||++.+|.++|+.++.++..+ .+||+|||||||+++.|++.+|.. ..+++|+||||...+
T Consensus 13 ~~i~visDiHg~~~~l~~~l~~~~~~~~~d-----~~i~~GD~~~~g~~~~~~~~~l~~------~~~~~v~GNhd~~~~ 81 (221)
T 1g5b_A 13 RNIWVVGDLHGCYTNLMNKLDTIGFDNKKD-----LLISVGDLVDRGAENVECLELITF------PWFRAVRGNHEQMMI 81 (221)
T ss_dssp SCEEEECCCTTCHHHHHHHHHHHTCCTTTC-----EEEECSCCSSSSSCHHHHHGGGGS------TTEEECCCHHHHHHH
T ss_pred ceEEEEEcCCCCHHHHHHHHHHccCCCCCC-----EEEEeCCccCCCCChHHHHHHHhc------CCEEEEccCcHHHHH
Confidence 469999999999999999999998753321 788999999999999999988753 379999999999887
Q ss_pred hhccCCHHHH-HHHhCCC-------CchhhhHHHhHhhccccceEEE---eceEEEEcCCCCCCCCChHHhhhccCCccc
Q 004198 661 NALFGFRLEC-IERMGEN-------DGIWAWTRFNQLFNCLPLAALI---EKKIICMHGGIGRSIHSVEQIEKLERPITM 729 (769)
Q Consensus 661 ~~~~g~~~e~-~~~~~~~-------~~~~~~~~~~~~f~~lP~~~~i---~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~ 729 (769)
+..+++.... +...+.. ....+++.+.++|+.||+++.+ +.+++|||||+++.... ..+|..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lP~~~~~~~~~~~i~~vHgg~~~~~~~------~~~~~~- 154 (221)
T 1g5b_A 82 DGLSERGNVNHWLLNGGGWFFNLDYDKEILAKALAHKADELPLIIELVSKDKKYVICHADYPFDEYE------FGKPVD- 154 (221)
T ss_dssp HHHSTTCCCHHHHTTTGGGGGGSCHHHHHHHHHHHHHHTTCCSEEEEEETTEEEEECSSCCCSSBCC------TTCCCC-
T ss_pred hhhccCCcHHHHHHcCCCchhhcCHHHHHHHHHHHHHHHhCCcEEEEEecCCeEEEEecCCChhhcc------cCCCcc-
Confidence 7553332111 1111110 1123456788999999999877 46899999999765321 123321
Q ss_pred CCCccceeceeccCCC
Q 004198 730 DAGSIILMDLLWFVLN 745 (769)
Q Consensus 730 ~~~~~~~~dllWsdp~ 745 (769)
..+++|+++.
T Consensus 155 ------~~~~lw~~~~ 164 (221)
T 1g5b_A 155 ------HQQVIWNRER 164 (221)
T ss_dssp ------HHHHHHCCHH
T ss_pred ------ccccccCchh
Confidence 2478898764
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 | Back alignment and structure |
|---|
Probab=99.31 E-value=1e-12 Score=135.54 Aligned_cols=114 Identities=21% Similarity=0.207 Sum_probs=85.6
Q ss_pred CEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhh
Q 004198 582 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADIN 661 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~ 661 (769)
.+.++|||||++.+|.++++.+. ..+ .++++||++|+|+++.|++.+|..++ .+++++||||.....
T Consensus 5 ri~~isDiHg~~~~l~~~l~~~~--~~d------~ii~~GDl~~~g~~~~~~~~~l~~~~-----~~~~v~GNhD~~~~~ 71 (246)
T 3rqz_A 5 RILIISDVHANLVALEAVLSDAG--RVD------DIWSLGDIVGYGPRPRECVELVRVLA-----PNISVIGNHDWACIG 71 (246)
T ss_dssp CEEEECCCTTCHHHHHHHHHHHC--SCS------EEEECSCCSSSSSCHHHHHHHHHHHC-----SSEECCCHHHHHHTC
T ss_pred EEEEEeecCCCHHHHHHHHHhcc--CCC------EEEECCCcCCCCCCHHHHHHHHHhcC-----CCEEEeCchHHHHhc
Confidence 58999999999999999999987 222 78999999999999999999999884 379999999988765
Q ss_pred hccCCH-----HHHHHHhCCCCchhhhHHHhHhhccccceEEEeceEEEEcCCCCCC
Q 004198 662 ALFGFR-----LECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRS 713 (769)
Q Consensus 662 ~~~g~~-----~e~~~~~~~~~~~~~~~~~~~~f~~lP~~~~i~~~i~~vHgGi~~~ 713 (769)
...... .+..... ...+.....++++.||..... ++++++||++...
T Consensus 72 ~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~L~~lp~~~~~-~~i~~~Hg~p~~~ 123 (246)
T 3rqz_A 72 RLSLDEFNPVARFASYWT----TMQLQAEHLQYLESLPNRMID-GDWTVVHGSPRHP 123 (246)
T ss_dssp CCCCC--CGGGGCHHHHH----HHHCCHHHHHHHHHCCSEEEE-TTEEEESSCSSST
T ss_pred cCCccccCHHHHHHHHHH----HHHcCHHHHHHHHhCCcEEEE-CCEEEEECCcCCc
Confidence 432210 0000000 112224566788999998776 4899999998653
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=1.6e-12 Score=135.81 Aligned_cols=119 Identities=15% Similarity=0.077 Sum_probs=86.4
Q ss_pred CEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhh
Q 004198 582 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADIN 661 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~ 661 (769)
.|.||+||||++.+|.++++.+.....+ .++|+||+|++|+.+.|++.+|.+++ .+++|+||||...++
T Consensus 13 ~i~~iSDiHg~~~~l~~vl~~~~~~~~D------~ii~~GDlv~~g~~~~~~~~~l~~~~-----~~~~v~GNhD~~~~~ 81 (270)
T 3qfm_A 13 KIALLSDIHGNTTALEAVLADARQLGVD------EYWLLGDILMPGTGRRRILDLLDQLP-----ITARVLGNWEDSLWH 81 (270)
T ss_dssp EEEEECCCTTCHHHHHHHHHHHHHTTCC------EEEECSCCSSSSSCSHHHHHHHHTSC-----EEEECCCHHHHHHHH
T ss_pred EEEEEecCCCCHHHHHHHHHHHHhcCCC------EEEEcCCCCCCCCCHHHHHHHHHccC-----CEEEEcCChHHHHHH
Confidence 4899999999999999999887644333 79999999999999999999998863 589999999998876
Q ss_pred hcc---CCHHHHHHHhCC---CCchhhhHHHhHhhccccceEEE--e-ceEEEEcCCCC
Q 004198 662 ALF---GFRLECIERMGE---NDGIWAWTRFNQLFNCLPLAALI--E-KKIICMHGGIG 711 (769)
Q Consensus 662 ~~~---g~~~e~~~~~~~---~~~~~~~~~~~~~f~~lP~~~~i--~-~~i~~vHgGi~ 711 (769)
... +|.......+.. .....+.....++++.||....+ + .+|+++||-..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~L~~LP~~~~~~~~g~~i~lvHg~p~ 140 (270)
T 3qfm_A 82 GVRKELDSTRPSQRYLLRQCQYVLEEISLEEIEVLHNQPLQIHRQFGDLTVGISHHLPD 140 (270)
T ss_dssp HHTTCSCTTSHHHHHHHHHHHHHHTTSCHHHHHHHHSCCSEEEEEETTEEEEEESSBTT
T ss_pred hhccccCCCcHHHHHHHHHHHHHHHHcCHHHHHHHHhCCCceEEEECCcEEEEEECCCC
Confidence 443 232111111100 00112234567899999998766 3 38999997654
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A | Back alignment and structure |
|---|
Probab=99.23 E-value=2e-11 Score=126.04 Aligned_cols=120 Identities=16% Similarity=0.114 Sum_probs=83.3
Q ss_pred CEEEEccCCCCHHHHHHHHHHhC---CC--CCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcc
Q 004198 582 PVKVFGDLHGQFGDLMRLFDEYG---FP--STAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHE 656 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~~~l~~~~---~~--~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE 656 (769)
.+.+||||||++..|.++++.+. .. ..+ .+|++||++|+|+.+.|++.+|..++... .+++++||||
T Consensus 3 ~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d------~ii~~GD~~~~g~~~~~~~~~l~~l~~~~--~~~~v~GNhD 74 (252)
T 1nnw_A 3 YVAVLANIAGNLPALTAALSRIEEMREEGYEIE------KYYILGNIVGLFPYPKEVIEVIKDLTKKE--NVKIIRGKYD 74 (252)
T ss_dssp EEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEE------EEEEESCSSSSSSCHHHHHHHHHHHHHHS--CEEEECCHHH
T ss_pred EEEEEeecCCCHHHHHHHHHHHHhhhhccCCCC------EEEEeCccCCCCCCHHHHHHHHHhhHhhc--CeeEEecchH
Confidence 48999999999999999988765 32 112 68999999999999999999999887533 5999999999
Q ss_pred hhhhhhccCCH-----------HHHHHHhCCCCchhhhHHHhHhhccccceEEEe--c-eEEEEcCCC
Q 004198 657 AADINALFGFR-----------LECIERMGENDGIWAWTRFNQLFNCLPLAALIE--K-KIICMHGGI 710 (769)
Q Consensus 657 ~~~~~~~~g~~-----------~e~~~~~~~~~~~~~~~~~~~~f~~lP~~~~i~--~-~i~~vHgGi 710 (769)
.........+. ......+ ......+-....++++.||....++ + +++++||++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~L~~lp~~~~~~~~~~~i~~~H~~p 141 (252)
T 1nnw_A 75 QIIAMSDPHATDPGYIDKLELPGHVKKAL-KFTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYGSP 141 (252)
T ss_dssp HHHHHSCTTCSSSGGGGGSSCCHHHHHHH-HHHHHHHHHHHHHHHHTSCSCEEEEETTEEEEEESSCS
T ss_pred HHhhccccccCCcccccchhhhHHHHHHH-HHHHHHCCHHHHHHHHhCCceEEEeeCCcEEEEEcCCC
Confidence 87665321110 0000000 0000112234557888999877653 3 799999998
|
| >1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=98.68 E-value=3.4e-08 Score=98.80 Aligned_cols=68 Identities=19% Similarity=0.356 Sum_probs=55.7
Q ss_pred CEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCC--------ChHHHHHHHHHhhhcCCCceEEecC
Q 004198 582 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQ--------HSLETITLLLALKIEYPENVHLIRG 653 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~--------~s~e~l~ll~~lk~~~p~~v~llrG 653 (769)
.+.+++|+||++..|.++++.+.....+ .+|++||++|+|+ .+.+++.+|..++ ..+++++|
T Consensus 27 ki~~iSD~H~~~~~l~~~l~~~~~~~~d------~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~~~----~~v~~V~G 96 (208)
T 1su1_A 27 KLMFASDIHGSLPATERVLELFAQSGAQ------WLVILGDVLNHGPRNALPEGYAPAKVVERLNEVA----HKVIAVRG 96 (208)
T ss_dssp EEEEECCCTTBHHHHHHHHHHHHHHTCS------EEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTG----GGEEECCC
T ss_pred EEEEEEcCCCCHHHHHHHHHHHHhcCCC------EEEECCCccccCcccccccccCHHHHHHHHHhcC----CceEEEEC
Confidence 4899999999999999998876422222 7899999999998 4688999988775 37999999
Q ss_pred Ccchhh
Q 004198 654 NHEAAD 659 (769)
Q Consensus 654 NHE~~~ 659 (769)
|||...
T Consensus 97 NHD~~~ 102 (208)
T 1su1_A 97 NCDSEV 102 (208)
T ss_dssp TTCCHH
T ss_pred CCchHH
Confidence 999754
|
| >2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.39 E-value=2e-07 Score=90.77 Aligned_cols=61 Identities=23% Similarity=0.256 Sum_probs=47.7
Q ss_pred CEEEEccCCC--CHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchh
Q 004198 582 PVKVFGDLHG--QFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAA 658 (769)
Q Consensus 582 ~i~viGDiHG--~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~ 658 (769)
.+.+++|+|| +..+|.++++.+. ...+ .++++||++|+ +++.+|..+. ..+++++||||..
T Consensus 24 ri~~iSD~Hg~~~~~~l~~~l~~~~-~~~D------~ii~~GD~~~~-----~~~~~l~~~~----~~v~~V~GNhD~~ 86 (178)
T 2kkn_A 24 RFLLISDSHVPVRMASLPDEILNSL-KEYD------GVIGLGDYVDL-----DTVILLEKFS----KEFYGVHGNMDYP 86 (178)
T ss_dssp EEEEECCCCBTTTTCCCCHHHHHGG-GGCS------EEEESSCBSCH-----HHHHHHHHHT----SSEEECCCSSSCG
T ss_pred EEEEEecccCCCCHHHHHHHHHHHh-cCCC------EEEECCCCCCH-----HHHHHHHhcC----CCEEEEECCCCcH
Confidence 4899999997 7777888887754 2222 68899999984 7888888763 3699999999974
|
| >2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=98.17 E-value=5e-06 Score=83.37 Aligned_cols=92 Identities=25% Similarity=0.313 Sum_probs=59.8
Q ss_pred CEEEEccCCCCHHH--HHHHHHH-hCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchh
Q 004198 582 PVKVFGDLHGQFGD--LMRLFDE-YGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAA 658 (769)
Q Consensus 582 ~i~viGDiHG~~~~--l~~~l~~-~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~ 658 (769)
.+.+++|+|++... |.+.|.. +.....+ .+|++||++| .+++.+|..+. ..+++++||||..
T Consensus 27 ~i~~iSD~H~~~~~~~l~~~l~~~~~~~~~D------~vi~~GDl~~-----~~~l~~l~~~~----~~v~~V~GNHD~~ 91 (215)
T 2a22_A 27 LVLLIGDLKIPYGAKELPSNFRELLATDKIN------YVLCTGNVCS-----QEYVEMLKNIT----KNVYIVSGDLDSA 91 (215)
T ss_dssp EEEEECCCCTTTTCSSCCGGGHHHHHCTTCC------EEEECSCCCC-----HHHHHHHHHHC----SCEEECCCTTCCS
T ss_pred EEEEEecCCCCCChHHHHHHHHHHHhcCCCC------EEEECCCCCC-----HHHHHHHHHcC----CCEEEecCCCcCc
Confidence 48999999997632 3222222 1111122 6888999997 58888887763 3699999999976
Q ss_pred hhhhccCCHHHHHHHhCCCCchhhhHHHhHhhccccceEEEe---ceEEEEcCCCC
Q 004198 659 DINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIE---KKIICMHGGIG 711 (769)
Q Consensus 659 ~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~f~~lP~~~~i~---~~i~~vHgGi~ 711 (769)
..... .+++..+|....++ .+|+++||...
T Consensus 92 ~~~~~-----------------------~~~~~~lp~~~~~~~~~~~i~l~Hg~~~ 124 (215)
T 2a22_A 92 IFNPD-----------------------PESNGVFPEYVVVQIGEFKIGLMHGNQV 124 (215)
T ss_dssp CCBCC-----------------------GGGTBCCCSEEEEEETTEEEEEECSTTS
T ss_pred ccccC-----------------------hhhHhhCCceEEEecCCeEEEEEcCCcc
Confidence 54310 02345677654442 37999999764
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=98.12 E-value=2.7e-06 Score=85.46 Aligned_cols=72 Identities=10% Similarity=0.106 Sum_probs=53.1
Q ss_pred CEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhh
Q 004198 582 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADI 660 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~ 660 (769)
.|.++||+|+.+..|.++++.......+ -+|++||++|+|....++..++..|+.. +..+++++||||....
T Consensus 7 ri~~iSD~H~~~~~~~~~~~~~~~~~~D------~vi~~GDl~~~~~~~~~~~~~~~~l~~~-~~pv~~v~GNHD~~~~ 78 (228)
T 1uf3_A 7 YILATSNPMGDLEALEKFVKLAPDTGAD------AIALIGNLMPKAAKSRDYAAFFRILSEA-HLPTAYVPGPQDAPIW 78 (228)
T ss_dssp EEEEEECCTTCHHHHHHHHTHHHHHTCS------EEEEESCSSCTTCCHHHHHHHHHHHGGG-CSCEEEECCTTSCSHH
T ss_pred EEEEEeeccCCHHHHHHHHHHHhhcCCC------EEEECCCCCCCCCCHHHHHHHHHHHHhc-CCcEEEECCCCCchhH
Confidence 5899999999999988887765321112 6888999999997666555555555432 3469999999997653
|
| >1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A | Back alignment and structure |
|---|
Probab=98.12 E-value=1.8e-06 Score=84.86 Aligned_cols=64 Identities=16% Similarity=0.298 Sum_probs=49.5
Q ss_pred CEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhh
Q 004198 582 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADI 660 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~ 660 (769)
.+.+++|+||++..|.++++.+.....+ .++++||++|. +++.+|..+ +..+++++||||....
T Consensus 27 ~i~~iSD~Hg~~~~l~~~l~~~~~~~~D------~ii~~GDl~~~-----~~~~~l~~l----~~~~~~V~GNhD~~~~ 90 (190)
T 1s3l_A 27 KIGIMSDTHDHLPNIRKAIEIFNDENVE------TVIHCGDFVSL-----FVIKEFENL----NANIIATYGNNDGERC 90 (190)
T ss_dssp EEEEECCCTTCHHHHHHHHHHHHHSCCS------EEEECSCCCST-----HHHHHGGGC----SSEEEEECCTTCCCHH
T ss_pred EEEEEeeCCCCHHHHHHHHHHHhhcCCC------EEEECCCCCCH-----HHHHHHHhc----CCCEEEEeCCCcchHH
Confidence 4999999999999999999876432222 68889999984 566666543 3479999999997654
|
| >3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=98.01 E-value=4.3e-06 Score=81.00 Aligned_cols=57 Identities=21% Similarity=0.198 Sum_probs=42.2
Q ss_pred CEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchh
Q 004198 582 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAA 658 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~ 658 (769)
++.++||+||+...|.++++.+.. ..+ .++++||+.- +++ ..+. ..+++++||||..
T Consensus 8 ~i~~isD~H~~~~~~~~~~~~~~~-~~d------~i~~~GD~~~------~~l---~~l~----~~~~~v~GNhD~~ 64 (176)
T 3ck2_A 8 TIIVMSDSHGDSLIVEEVRDRYVG-KVD------AVFHNGDSEL------RPD---SPLW----EGIRVVKGNMDFY 64 (176)
T ss_dssp EEEEECCCTTCHHHHHHHHHHHTT-TSS------EEEECSCCCS------CTT---CGGG----TTEEECCCTTCCS
T ss_pred EEEEEecCCCCHHHHHHHHHHhhc-CCC------EEEECCCCch------HHH---Hhhh----CCeEEecCcccch
Confidence 489999999999999999998753 222 6888999721 222 2222 2699999999964
|
| >1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A | Back alignment and structure |
|---|
Probab=98.00 E-value=1e-05 Score=79.56 Aligned_cols=63 Identities=27% Similarity=0.350 Sum_probs=42.9
Q ss_pred CEEEEccCCCCHH--HHHHHHHH-hCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchh
Q 004198 582 PVKVFGDLHGQFG--DLMRLFDE-YGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAA 658 (769)
Q Consensus 582 ~i~viGDiHG~~~--~l~~~l~~-~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~ 658 (769)
.+.+++|+|++.. ++.+.|.. +.....+ .++++||+++ .+++.+|..+. ..+++++||||..
T Consensus 12 ~i~~iSD~H~~~~~~~~~~~l~~~~~~~~~d------~ii~~GDl~~-----~~~~~~l~~~~----~~~~~v~GNhD~~ 76 (192)
T 1z2w_A 12 LVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQ------HILCTGNLCT-----KESYDYLKTLA----GDVHIVRGDFDEN 76 (192)
T ss_dssp EEEEECCCCBTTTCSSCCHHHHTTCCTTSCS------EEEECSCCBS-----HHHHHHHHHHC----SEEEECCCTTCCC
T ss_pred EEEEEecCCCCccchhHHHHHHHHhccCCCC------EEEEcCCCCC-----HHHHHHHHhcC----CCEEEEcCCcCcc
Confidence 4899999999742 23333332 2211112 6888999997 67888887663 3699999999975
Q ss_pred h
Q 004198 659 D 659 (769)
Q Consensus 659 ~ 659 (769)
.
T Consensus 77 ~ 77 (192)
T 1z2w_A 77 L 77 (192)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 | Back alignment and structure |
|---|
Probab=97.97 E-value=1.3e-05 Score=78.99 Aligned_cols=68 Identities=18% Similarity=0.207 Sum_probs=47.5
Q ss_pred CEEEEccCCCCHHHH-------------HHHHHHhCC--CCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCC
Q 004198 582 PVKVFGDLHGQFGDL-------------MRLFDEYGF--PSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPE 646 (769)
Q Consensus 582 ~i~viGDiHG~~~~l-------------~~~l~~~~~--~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~ 646 (769)
.+.+++|+|+....+ .++++.+.. ...+ .++++||++++|+...+++.+|..+. .
T Consensus 3 ~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D------~vi~~GDl~~~~~~~~~~~~~l~~l~----~ 72 (195)
T 1xm7_A 3 MMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPED------TLYHLGDFTWHFNDKNEYLRIWKALP----G 72 (195)
T ss_dssp CEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTC------EEEECSCCBSCSCCTTSHHHHHHHSS----S
T ss_pred EEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCC------EEEECCCCCCCchhHHHHHHHHHHCC----C
Confidence 589999999644322 222333221 1122 68889999999988888888887763 3
Q ss_pred ceEEecCCcchhh
Q 004198 647 NVHLIRGNHEAAD 659 (769)
Q Consensus 647 ~v~llrGNHE~~~ 659 (769)
.+++++||||...
T Consensus 73 ~~~~v~GNhD~~~ 85 (195)
T 1xm7_A 73 RKILVMGNHDKDK 85 (195)
T ss_dssp EEEEECCTTCCCH
T ss_pred CEEEEeCCCCCch
Confidence 6999999999753
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=97.87 E-value=6e-06 Score=84.90 Aligned_cols=72 Identities=10% Similarity=0.084 Sum_probs=51.1
Q ss_pred CEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCCh--------------------------HHHHH
Q 004198 582 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHS--------------------------LETIT 635 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s--------------------------~e~l~ 635 (769)
.|.+++|||+++..|.++++.+.....+ -+|++||++|+|+.+ .+...
T Consensus 7 ri~~iSDlH~~~~~~~~~l~~~~~~~~D------~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 80 (260)
T 2yvt_A 7 KVLAIKNFKERFDLLPKLKGVIAEKQPD------ILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDK 80 (260)
T ss_dssp EEEEEECCTTCGGGHHHHHHHHHHHCCS------EEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred EEEEEeecCCChHHHHHHHHHHHhcCCC------EEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHHHHH
Confidence 4899999999998888888776322222 688899999998652 12334
Q ss_pred HHHHhhhcCCCceEEecCCcchhhh
Q 004198 636 LLLALKIEYPENVHLIRGNHEAADI 660 (769)
Q Consensus 636 ll~~lk~~~p~~v~llrGNHE~~~~ 660 (769)
++..|+. .+..+++++||||....
T Consensus 81 ~l~~l~~-~~~pv~~v~GNHD~~~~ 104 (260)
T 2yvt_A 81 FFREIGE-LGVKTFVVPGKNDAPLK 104 (260)
T ss_dssp HHHHHHT-TCSEEEEECCTTSCCHH
T ss_pred HHHHHHh-cCCcEEEEcCCCCchhh
Confidence 4444443 23469999999998654
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=97.45 E-value=0.062 Score=57.40 Aligned_cols=217 Identities=15% Similarity=0.184 Sum_probs=120.5
Q ss_pred CcEEEEECCCCc--EEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 75 NSVHLYDVLTRK--WTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 75 ~dv~~yD~~~~~--W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
+.+++||..+++ |+.-... ....+.+..++.||+... ...++.||..+.+..|..-.. .+....
T Consensus 113 g~l~a~d~~tG~~~W~~~~~~------~~~~~p~~~~~~v~v~~~-------~g~l~~~d~~tG~~~W~~~~~-~~~~~~ 178 (376)
T 3q7m_A 113 AQVYALNTSDGTVAWQTKVAG------EALSRPVVSDGLVLIHTS-------NGQLQALNEADGAVKWTVNLD-MPSLSL 178 (376)
T ss_dssp SEEEEEETTTCCEEEEEECSS------CCCSCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEECC-C-----
T ss_pred CEEEEEECCCCCEEEEEeCCC------ceEcCCEEECCEEEEEcC-------CCeEEEEECCCCcEEEEEeCC-CCceee
Confidence 579999998875 8754321 112233455788888553 236999999987778987632 111111
Q ss_pred ccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCC--CCCccc--ccEEEEecCCEEEEEcccCCC
Q 004198 153 RYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGD--RPSARM--YATASARSDGMFLLCGGRDAS 228 (769)
Q Consensus 153 R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~--~P~~r~--~hsa~~~~~g~l~v~GG~~~~ 228 (769)
+...+.+..+ +.+|+ |..+ ..++.||+.+....|+.-..... ....+. ..+..+..++.+|+.+.
T Consensus 179 ~~~~~~~~~~-~~v~~-g~~~-----g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~---- 247 (376)
T 3q7m_A 179 RGESAPTTAF-GAAVV-GGDN-----GRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY---- 247 (376)
T ss_dssp CCCCCCEEET-TEEEE-CCTT-----TEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECT----
T ss_pred cCCCCcEEEC-CEEEE-EcCC-----CEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec----
Confidence 1122333334 46655 3322 35899999988888987543210 000110 11222345788887642
Q ss_pred CCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCc--EEeccCC
Q 004198 229 GAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGV--WLDRNGL 306 (769)
Q Consensus 229 ~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~--W~~~~~~ 306 (769)
-..++.++.. +++-.|....+. ..+.+..++.+|+... ...+++||..+++ |+.-...
T Consensus 248 ---~g~l~~~d~~-tG~~~w~~~~~~------~~~~~~~~~~l~~~~~----------~g~l~~~d~~tG~~~w~~~~~~ 307 (376)
T 3q7m_A 248 ---NGNLTALDLR-SGQIMWKRELGS------VNDFIVDGNRIYLVDQ----------NDRVMALTIDGGVTLWTQSDLL 307 (376)
T ss_dssp ---TSCEEEEETT-TCCEEEEECCCC------EEEEEEETTEEEEEET----------TCCEEEEETTTCCEEEEECTTT
T ss_pred ---CcEEEEEECC-CCcEEeeccCCC------CCCceEECCEEEEEcC----------CCeEEEEECCCCcEEEeecccC
Confidence 2357788875 345566654321 2345566888888753 2359999998764 7653111
Q ss_pred ccCCCCCCCCCCCCCccCcccccceEEEEeCCEEEEEcCcCCCccccceEEecCCC
Q 004198 307 VTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLDDFLVAENSP 362 (769)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~~~~iyv~GG~~~~~~~~D~~~ld~~~ 362 (769)
.+...+.+..++.||+... + ..++.+|..+
T Consensus 308 --------------------~~~~~~~~~~~~~l~v~~~-~-----g~l~~~d~~t 337 (376)
T 3q7m_A 308 --------------------HRLLTSPVLYNGNLVVGDS-E-----GYLHWINVED 337 (376)
T ss_dssp --------------------TSCCCCCEEETTEEEEECT-T-----SEEEEEETTT
T ss_pred --------------------CCcccCCEEECCEEEEEeC-C-----CeEEEEECCC
Confidence 2222344556788887542 1 2366666554
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.049 Score=57.39 Aligned_cols=264 Identities=9% Similarity=-0.053 Sum_probs=141.7
Q ss_pred CCcccccceeecC-----CCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCC
Q 004198 11 PSYRTLETYWDTD-----EDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTR 85 (769)
Q Consensus 11 ~~y~~~~~~w~~~-----~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~ 85 (769)
..||+.++++... ...+.....+.++.. ++++|+.... .+.+.++|+.+.
T Consensus 20 ~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~------~~~lyv~~~~-------------------~~~v~viD~~t~ 74 (328)
T 3dsm_A 20 SYYDPATCEVENEVFYRANGFKLGDVAQSMVIR------DGIGWIVVNN-------------------SHVIFAIDINTF 74 (328)
T ss_dssp EEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE------TTEEEEEEGG-------------------GTEEEEEETTTC
T ss_pred EEEECCCCEEhhhhHhhhcCcccCccceEEEEE------CCEEEEEEcC-------------------CCEEEEEECccc
Confidence 3466666666532 122333445666666 7899998752 367999999988
Q ss_pred cE-EEecCCCCCCcccccceEEE-ECCEEEEECccCCCCCCcCcEEEEEccCCcceEE-EeeecCCCCC-CccccEEEEE
Q 004198 86 KW-TRIRPAGEPPSPRAAHAAAA-VGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWH-RVVVQGQGPG-PRYGHVMDLV 161 (769)
Q Consensus 86 ~W-~~l~~~g~~P~~R~~hs~~~-~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~-~~~~~g~~p~-~R~~hs~~~~ 161 (769)
+- ..++ .+ ..| +.++. -++++|+.... .+.++++|+.+. +-. .++. +.... ...-+.+++
T Consensus 75 ~~~~~i~-~~--~~p---~~i~~~~~g~lyv~~~~------~~~v~~iD~~t~--~~~~~i~~-g~~~~~~~~p~~i~~- 138 (328)
T 3dsm_A 75 KEVGRIT-GF--TSP---RYIHFLSDEKAYVTQIW------DYRIFIINPKTY--EITGYIEC-PDMDMESGSTEQMVQ- 138 (328)
T ss_dssp CEEEEEE-CC--SSE---EEEEEEETTEEEEEEBS------CSEEEEEETTTT--EEEEEEEC-TTCCTTTCBCCCEEE-
T ss_pred EEEEEcC-CC--CCC---cEEEEeCCCeEEEEECC------CCeEEEEECCCC--eEEEEEEc-CCccccCCCcceEEE-
Confidence 76 3343 21 122 34444 57799997642 367999999984 333 2322 32110 001223434
Q ss_pred CCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCc----ccceEE
Q 004198 162 SQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAP----LADAYG 237 (769)
Q Consensus 162 ~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~----l~d~~~ 237 (769)
.++.+|+..- ...+.+.++|+++. +....-..+..| +......+|.+|+.......... .+.++.
T Consensus 139 ~~~~lyv~~~----~~~~~v~viD~~t~--~~~~~i~~g~~p-----~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~ 207 (328)
T 3dsm_A 139 YGKYVYVNCW----SYQNRILKIDTETD--KVVDELTIGIQP-----TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYR 207 (328)
T ss_dssp ETTEEEEEEC----TTCCEEEEEETTTT--EEEEEEECSSCB-----CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEE
T ss_pred ECCEEEEEcC----CCCCEEEEEECCCC--eEEEEEEcCCCc-----cceEEcCCCCEEEEECCCccCCccccCCceEEE
Confidence 5568888742 12357999999987 433221122222 33444577888887532211111 267899
Q ss_pred EecCCCCceEE-EeCCCCCCCcccceEEEEe--CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccCCccCCCCCC
Q 004198 238 LLMHRNGQWEW-TLAPGVAPSPRYQHAAVFV--GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSK 314 (769)
Q Consensus 238 ld~~~~~~W~W-~~~~~~~P~~R~~hs~~~~--~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~ 314 (769)
+|..+. +... ...+ ....-+.+++- ++.+|+..+ .++++|+++.+..........
T Consensus 208 id~~t~-~v~~~~~~~----~g~~p~~la~~~d~~~lyv~~~------------~v~~~d~~t~~~~~~~~~~~~----- 265 (328)
T 3dsm_A 208 IDAETF-TVEKQFKFK----LGDWPSEVQLNGTRDTLYWINN------------DIWRMPVEADRVPVRPFLEFR----- 265 (328)
T ss_dssp EETTTT-EEEEEEECC----TTCCCEEEEECTTSCEEEEESS------------SEEEEETTCSSCCSSCSBCCC-----
T ss_pred EECCCC-eEEEEEecC----CCCCceeEEEecCCCEEEEEcc------------EEEEEECCCCceeeeeeecCC-----
Confidence 998754 2221 1221 12223455555 677888632 489999988765321111100
Q ss_pred CCCCCCCccCcccccceEEEE--eCCEEEEEcCcCCCccccceEEecCC
Q 004198 315 GHGEHDPSLELMRRCRHASAS--IGVRIYIYGGLKGDILLDDFLVAENS 361 (769)
Q Consensus 315 ~~~~~~~~~~~~~R~~hs~~~--~~~~iyv~GG~~~~~~~~D~~~ld~~ 361 (769)
...-.++++ .+++|||....+. ..-+.+++++.+
T Consensus 266 ------------~~~p~gi~vdp~~g~lyva~~~~y-~~~~~V~v~d~~ 301 (328)
T 3dsm_A 266 ------------DTKYYGLTVNPNNGEVYVADAIDY-QQQGIVYRYSPQ 301 (328)
T ss_dssp ------------SSCEEEEEECTTTCCEEEEECTTS-SSEEEEEEECTT
T ss_pred ------------CCceEEEEEcCCCCeEEEEccccc-ccCCEEEEECCC
Confidence 122234444 3678999862111 113456677655
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00024 Score=75.41 Aligned_cols=71 Identities=18% Similarity=0.272 Sum_probs=46.6
Q ss_pred CEEEEccCCC------------CHHHHHHHHHHhCC--CCCCCCCcceeEEEeccccCCCCCh-H-HHHHHHHHhhhcCC
Q 004198 582 PVKVFGDLHG------------QFGDLMRLFDEYGF--PSTAGDITYIDYLFLGDYVDRGQHS-L-ETITLLLALKIEYP 645 (769)
Q Consensus 582 ~i~viGDiHG------------~~~~l~~~l~~~~~--~~~~~~~~~~~~vfLGD~vDrG~~s-~-e~l~ll~~lk~~~p 645 (769)
.|.+++|+|. ....|.++++.+.. ...+ -+|++||++|.|... . ++..+|..+.....
T Consensus 27 ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d------~vi~~GDl~~~~~~~~~~~~~~~l~~l~~~~~ 100 (330)
T 3ib7_A 27 VLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPD------AIVFTGDLADKGEPAAYRKLRGLVEPFAAQLG 100 (330)
T ss_dssp EEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCS------EEEECSCCBTTCCHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCC------EEEECCCCCCCCCHHHHHHHHHHHHHHHhhcC
Confidence 4899999996 26677777777642 2222 588899999998642 2 22333433322223
Q ss_pred CceEEecCCcchh
Q 004198 646 ENVHLIRGNHEAA 658 (769)
Q Consensus 646 ~~v~llrGNHE~~ 658 (769)
-.+++++||||..
T Consensus 101 ~pv~~v~GNHD~~ 113 (330)
T 3ib7_A 101 AELVWVMGNHDDR 113 (330)
T ss_dssp CEEEECCCTTSCH
T ss_pred CCEEEeCCCCCCH
Confidence 4699999999963
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=97.24 E-value=0.13 Score=54.87 Aligned_cols=180 Identities=14% Similarity=0.146 Sum_probs=104.2
Q ss_pred CcEEEEECCCCc--EEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 75 NSVHLYDVLTRK--WTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 75 ~dv~~yD~~~~~--W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
+.++.||..+++ |+.-.... ....+...+.+..++.||+... ...++.||+.+.+..|+.-.. .|..
T Consensus 153 g~l~~~d~~tG~~~W~~~~~~~-~~~~~~~~~~~~~~~~v~~g~~-------~g~l~~~d~~tG~~~w~~~~~---~~~~ 221 (376)
T 3q7m_A 153 GQLQALNEADGAVKWTVNLDMP-SLSLRGESAPTTAFGAAVVGGD-------NGRVSAVLMEQGQMIWQQRIS---QATG 221 (376)
T ss_dssp SEEEEEETTTCCEEEEEECCC------CCCCCCEEETTEEEECCT-------TTEEEEEETTTCCEEEEEECC---C---
T ss_pred CeEEEEECCCCcEEEEEeCCCC-ceeecCCCCcEEECCEEEEEcC-------CCEEEEEECCCCcEEEEEecc---cCCC
Confidence 469999998876 88654321 1111223344555777777321 235999999987788986531 1111
Q ss_pred c--------cccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcc
Q 004198 153 R--------YGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGG 224 (769)
Q Consensus 153 R--------~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG 224 (769)
. ..... ++.++.+|+.+. ...++++|..+....|+.-... .......++.+|+...
T Consensus 222 ~~~~~~~~~~~~~p-~~~~~~v~~~~~------~g~l~~~d~~tG~~~w~~~~~~---------~~~~~~~~~~l~~~~~ 285 (376)
T 3q7m_A 222 STEIDRLSDVDTTP-VVVNGVVFALAY------NGNLTALDLRSGQIMWKRELGS---------VNDFIVDGNRIYLVDQ 285 (376)
T ss_dssp --------CCCCCC-EEETTEEEEECT------TSCEEEEETTTCCEEEEECCCC---------EEEEEEETTEEEEEET
T ss_pred CcccccccccCCCc-EEECCEEEEEec------CcEEEEEECCCCcEEeeccCCC---------CCCceEECCEEEEEcC
Confidence 1 11222 233447776542 2368999999888889864211 1233446788888642
Q ss_pred cCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCc--EEe
Q 004198 225 RDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGV--WLD 302 (769)
Q Consensus 225 ~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~--W~~ 302 (769)
-..++.+|.. +++-.|..... ..+...+.++.++.||+... ...+++||+.+++ |+.
T Consensus 286 -------~g~l~~~d~~-tG~~~w~~~~~---~~~~~~~~~~~~~~l~v~~~----------~g~l~~~d~~tG~~~~~~ 344 (376)
T 3q7m_A 286 -------NDRVMALTID-GGVTLWTQSDL---LHRLLTSPVLYNGNLVVGDS----------EGYLHWINVEDGRFVAQQ 344 (376)
T ss_dssp -------TCCEEEEETT-TCCEEEEECTT---TTSCCCCCEEETTEEEEECT----------TSEEEEEETTTCCEEEEE
T ss_pred -------CCeEEEEECC-CCcEEEeeccc---CCCcccCCEEECCEEEEEeC----------CCeEEEEECCCCcEEEEE
Confidence 1357888876 44556665421 11223344556888887532 2359999998875 654
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00054 Score=70.49 Aligned_cols=67 Identities=19% Similarity=0.192 Sum_probs=45.9
Q ss_pred CEEEEccCCCCH------------HHHHHHHHHhCCC--CCCCCCcceeEEEeccccCCCCChH--HHHHHHHHhhhcCC
Q 004198 582 PVKVFGDLHGQF------------GDLMRLFDEYGFP--STAGDITYIDYLFLGDYVDRGQHSL--ETITLLLALKIEYP 645 (769)
Q Consensus 582 ~i~viGDiHG~~------------~~l~~~l~~~~~~--~~~~~~~~~~~vfLGD~vDrG~~s~--e~l~ll~~lk~~~p 645 (769)
.|.+++|+|+.. ..|.++++.+... ..+ -+|++||+++.|.... ++..+|..+ +
T Consensus 2 ri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d------~vi~~GDl~~~~~~~~~~~~~~~l~~l----~ 71 (274)
T 3d03_A 2 LLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPD------AVVVSGDIVNCGRPEEYQVARQILGSL----N 71 (274)
T ss_dssp EEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCS------EEEEESCCBSSCCHHHHHHHHHHHTTC----S
T ss_pred EEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCC------EEEECCCCCCCCCHHHHHHHHHHHHhc----C
Confidence 378999999984 6788888776432 112 6888999999887421 222333222 3
Q ss_pred CceEEecCCcchh
Q 004198 646 ENVHLIRGNHEAA 658 (769)
Q Consensus 646 ~~v~llrGNHE~~ 658 (769)
-.++.++||||..
T Consensus 72 ~p~~~v~GNHD~~ 84 (274)
T 3d03_A 72 YPLYLIPGNHDDK 84 (274)
T ss_dssp SCEEEECCTTSCH
T ss_pred CCEEEECCCCCCH
Confidence 4599999999974
|
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00033 Score=73.11 Aligned_cols=62 Identities=26% Similarity=0.295 Sum_probs=41.9
Q ss_pred CEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCCh--HHHHHHHHHhhhcCCCceEEecCCcchhh
Q 004198 582 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHS--LETITLLLALKIEYPENVHLIRGNHEAAD 659 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s--~e~l~ll~~lk~~~p~~v~llrGNHE~~~ 659 (769)
.|.+++|+|++...+ ..+..+ -+|++||++++|... .+++.+|..+. . ..++++.||||...
T Consensus 61 ri~~iSD~H~~~~~l-------~i~~~D------~vi~aGDl~~~g~~~e~~~~~~~L~~l~--~-~~v~~V~GNHD~~~ 124 (296)
T 3rl5_A 61 RFVCISDTRSRTDGI-------QMPYGD------ILLHTGDFTELGLPSEVKKFNDWLGNLP--Y-EYKIVIAGNHELTF 124 (296)
T ss_dssp EEEEEBCCTTCCTTC-------CCCSCS------EEEECSCCSSSCCHHHHHHHHHHHHTSC--C-SEEEECCCTTCGGG
T ss_pred EEEEEeeCCCCcchh-------ccCCCC------EEEECCcccCCCCHHHHHHHHHHHHhCC--C-CeEEEEcCCccccc
Confidence 499999999997643 223222 678899999999732 23344444332 1 25899999999853
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 | Back alignment and structure |
|---|
Probab=97.03 E-value=0.00036 Score=73.41 Aligned_cols=71 Identities=20% Similarity=0.160 Sum_probs=46.9
Q ss_pred CEEEEccCCCCH-------------------HHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCC----ChHHHHHHHH
Q 004198 582 PVKVFGDLHGQF-------------------GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQ----HSLETITLLL 638 (769)
Q Consensus 582 ~i~viGDiHG~~-------------------~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~----~s~e~l~ll~ 638 (769)
.+.+++|+|... ..|.++++.+.....+ -+|++||+++.+. ...+.+..++
T Consensus 7 ~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d------~vi~~GD~~~~~~~~~~~~~~~~~~~~ 80 (322)
T 2nxf_A 7 TFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQ------CVVQLGDIIDGHNRRRDASDRALDTVM 80 (322)
T ss_dssp EEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCS------EEEECSCCBCTHHHHTTCHHHHHHHHH
T ss_pred EEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCC------EEEECCCccCCCCCcchHHHHHHHHHH
Confidence 389999999875 5566666655322222 5888999999875 1234444343
Q ss_pred HhhhcCCCceEEecCCcchh
Q 004198 639 ALKIEYPENVHLIRGNHEAA 658 (769)
Q Consensus 639 ~lk~~~p~~v~llrGNHE~~ 658 (769)
.+-...+..++++.||||..
T Consensus 81 ~~l~~~~~p~~~v~GNHD~~ 100 (322)
T 2nxf_A 81 AELDACSVDVHHVWGNHEFY 100 (322)
T ss_dssp HHHHTTCSEEEECCCHHHHH
T ss_pred HHHHhcCCcEEEecCCCCcc
Confidence 33223455799999999984
|
| >2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A | Back alignment and structure |
|---|
Probab=96.96 E-value=0.00056 Score=73.18 Aligned_cols=70 Identities=21% Similarity=0.253 Sum_probs=43.0
Q ss_pred CEEEEccCC-C----C-----------HHHHHHHHHHhCCCCCCCCCcceeEEEecc-ccCCCCChHHH----HHHHHHh
Q 004198 582 PVKVFGDLH-G----Q-----------FGDLMRLFDEYGFPSTAGDITYIDYLFLGD-YVDRGQHSLET----ITLLLAL 640 (769)
Q Consensus 582 ~i~viGDiH-G----~-----------~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD-~vDrG~~s~e~----l~ll~~l 640 (769)
.|+.++|+| | + ...|.++++.+.....+ -+|+.|| ++|++..+.+. ..+|..|
T Consensus 20 rilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D------~vliaGD~l~d~~~~~~~~~~~~~~~l~~L 93 (336)
T 2q8u_A 20 KILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVD------LILLTGDLLHSRNNPSVVALHDLLDYLKRM 93 (336)
T ss_dssp EEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCS------EEEEESCSBSCSSCCCHHHHHHHHHHHHHH
T ss_pred EEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCC------EEEECCccccCCCCCCHHHHHHHHHHHHHH
Confidence 488999999 8 3 34455555544321112 5788999 99999877664 4555555
Q ss_pred hhcCCCceEEecCCcchhh
Q 004198 641 KIEYPENVHLIRGNHEAAD 659 (769)
Q Consensus 641 k~~~p~~v~llrGNHE~~~ 659 (769)
+.. -.++++.||||...
T Consensus 94 ~~~--~pv~~i~GNHD~~~ 110 (336)
T 2q8u_A 94 MRT--APVVVLPGNHDWKG 110 (336)
T ss_dssp HHH--SCEEECCC------
T ss_pred Hhc--CCEEEECCCCCccc
Confidence 432 35999999999865
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.07 Score=53.84 Aligned_cols=193 Identities=16% Similarity=0.079 Sum_probs=118.6
Q ss_pred cccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccccceEEEECC
Q 004198 31 CGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGT 110 (769)
Q Consensus 31 ~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~ 110 (769)
+=+.+... ++.||.-.|..+ .+.+..+|+.+++=..-... |..-.+.+++..++
T Consensus 22 ftqGL~~~------~~~LyestG~~g-----------------~S~v~~vD~~tgkv~~~~~l---~~~~fgeGi~~~~~ 75 (243)
T 3mbr_X 22 FTEGLFYL------RGHLYESTGETG-----------------RSSVRKVDLETGRILQRAEV---PPPYFGAGIVAWRD 75 (243)
T ss_dssp CEEEEEEE------TTEEEEEECCTT-----------------SCEEEEEETTTCCEEEEEEC---CTTCCEEEEEEETT
T ss_pred ccccEEEE------CCEEEEECCCCC-----------------CceEEEEECCCCCEEEEEeC---CCCcceeEEEEeCC
Confidence 44466666 789999999642 35799999999986654433 33446677888899
Q ss_pred EEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCC
Q 004198 111 MVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKP 190 (769)
Q Consensus 111 ~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~ 190 (769)
+||+.... .+.+++||..+.+ .-.+++ .+..|..++. .++.+|+.=| .+.++.+|+++..
T Consensus 76 ~ly~ltw~------~~~v~v~D~~tl~-~~~ti~------~~~~Gwglt~-dg~~L~vSdg------s~~l~~iDp~t~~ 135 (243)
T 3mbr_X 76 RLIQLTWR------NHEGFVYDLATLT-PRARFR------YPGEGWALTS-DDSHLYMSDG------TAVIRKLDPDTLQ 135 (243)
T ss_dssp EEEEEESS------SSEEEEEETTTTE-EEEEEE------CSSCCCEEEE-CSSCEEEECS------SSEEEEECTTTCC
T ss_pred EEEEEEee------CCEEEEEECCcCc-EEEEEe------CCCCceEEee-CCCEEEEECC------CCeEEEEeCCCCe
Confidence 99998754 4679999999832 122332 2235666654 4457888533 3579999998862
Q ss_pred ceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCc--------ccce
Q 004198 191 YVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSP--------RYQH 262 (769)
Q Consensus 191 ~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~--------R~~h 262 (769)
.-..+... ..+.+-..-......+|.+|+--- ..+++..+|..+...-.|..+.+..|.. -.-.
T Consensus 136 -~~~~I~V~-~~g~~~~~lNeLe~~~G~lyanvw------~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlN 207 (243)
T 3mbr_X 136 -QVGSIKVT-AGGRPLDNLNELEWVNGELLANVW------LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLN 207 (243)
T ss_dssp -EEEEEECE-ETTEECCCEEEEEEETTEEEEEET------TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEE
T ss_pred -EEEEEEEc-cCCcccccceeeEEeCCEEEEEEC------CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceE
Confidence 12333321 111221111222345888886321 2478999999877666787776543221 1224
Q ss_pred EEEEe--CCEEEEEecc
Q 004198 263 AAVFV--GARLHVTGGA 277 (769)
Q Consensus 263 s~~~~--~~~i~V~GG~ 277 (769)
+.|.. ++++||.|-.
T Consensus 208 GIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 208 GIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp EEEEETTTTEEEEEETT
T ss_pred EEEEcCCCCEEEEECCC
Confidence 55554 6788888764
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0014 Score=71.50 Aligned_cols=71 Identities=15% Similarity=0.128 Sum_probs=47.5
Q ss_pred CEEEEccCCCCH-------------HHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHH----HHHHHHhhhcC
Q 004198 582 PVKVFGDLHGQF-------------GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLET----ITLLLALKIEY 644 (769)
Q Consensus 582 ~i~viGDiHG~~-------------~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~----l~ll~~lk~~~ 644 (769)
.|++++|+|+.. ..|.++++.+.....+ -+|+.||++|++..+.+. +.+|..|+. .
T Consensus 22 rilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D------~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~-~ 94 (386)
T 3av0_A 22 MFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPD------VVLHSGDLFNDLRPPVKALRIAMQAFKKLHE-N 94 (386)
T ss_dssp EEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCS------EEEECSCSBSSSSCCHHHHHHHHHHHHHHHH-T
T ss_pred EEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCC------EEEECCCCCCCCCCCHHHHHHHHHHHHHHHh-c
Confidence 489999999762 3566777665422222 588899999999544433 344544532 2
Q ss_pred CCceEEecCCcchhh
Q 004198 645 PENVHLIRGNHEAAD 659 (769)
Q Consensus 645 p~~v~llrGNHE~~~ 659 (769)
+-.++++.||||...
T Consensus 95 ~~pv~~v~GNHD~~~ 109 (386)
T 3av0_A 95 NIKVYIVAGNHEMPR 109 (386)
T ss_dssp TCEEEECCCGGGSCS
T ss_pred CCcEEEEcCCCCCCc
Confidence 346999999999754
|
| >1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0016 Score=69.56 Aligned_cols=70 Identities=21% Similarity=0.216 Sum_probs=44.9
Q ss_pred CEEEEccCCCCH-------------HHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHH----HHHHhhhcC
Q 004198 582 PVKVFGDLHGQF-------------GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETIT----LLLALKIEY 644 (769)
Q Consensus 582 ~i~viGDiHG~~-------------~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~----ll~~lk~~~ 644 (769)
.++.++|+|... ..|.++++.+.....+ -+|+.||++|++..+.+.+. +|..|+. .
T Consensus 2 kilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D------~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~-~ 74 (333)
T 1ii7_A 2 KFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVD------FILIAGDLFHSSRPSPGTLKKAIALLQIPKE-H 74 (333)
T ss_dssp EEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCS------EEEEESCSBSSSSCCHHHHHHHHHHHHHHHT-T
T ss_pred EEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCC------EEEECCCcCCCCCCCHHHHHHHHHHHHHHHH-C
Confidence 378999999864 3445555544322222 68889999998755544433 3444432 2
Q ss_pred CCceEEecCCcchh
Q 004198 645 PENVHLIRGNHEAA 658 (769)
Q Consensus 645 p~~v~llrGNHE~~ 658 (769)
+-.++++.||||..
T Consensus 75 ~~~v~~v~GNHD~~ 88 (333)
T 1ii7_A 75 SIPVFAIEGNHDRT 88 (333)
T ss_dssp TCCEEEECCTTTCC
T ss_pred CCcEEEeCCcCCCc
Confidence 34699999999975
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0027 Score=70.50 Aligned_cols=71 Identities=18% Similarity=0.208 Sum_probs=45.7
Q ss_pred CEEEEccCCCC--------------------------HHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCCh--HHH
Q 004198 582 PVKVFGDLHGQ--------------------------FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHS--LET 633 (769)
Q Consensus 582 ~i~viGDiHG~--------------------------~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s--~e~ 633 (769)
.|.+++|+|.. ...|.++++.+.....+ -+|++||+++.|... .++
T Consensus 41 ~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d------~vi~~GDl~~~~~~~~~~~~ 114 (443)
T 2xmo_A 41 SMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTD------VLIISGDLTNNGEKTSHEEL 114 (443)
T ss_dssp EEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCS------EEEEESCCBSSCCHHHHHHH
T ss_pred EEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCC------EEEECCCCCCCCCHHHHHHH
Confidence 48999999973 34556666554211112 688899999988643 333
Q ss_pred HHHHHHhhhcCCCceEEecCCcchhh
Q 004198 634 ITLLLALKIEYPENVHLIRGNHEAAD 659 (769)
Q Consensus 634 l~ll~~lk~~~p~~v~llrGNHE~~~ 659 (769)
...|..++. .+-.++.++||||...
T Consensus 115 ~~~l~~l~~-~~~~~~~v~GNHD~~~ 139 (443)
T 2xmo_A 115 AKKLTQVEK-NGTQVFVVPGNHDINN 139 (443)
T ss_dssp HHHHHHHHH-TTCEEEEECCTTTSSC
T ss_pred HHHHHHHHh-CCCeEEEECCcCCCCC
Confidence 444544431 2346999999999753
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=96.33 E-value=0.07 Score=54.36 Aligned_cols=203 Identities=11% Similarity=0.004 Sum_probs=120.8
Q ss_pred eecCCCCCCCc--cccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCC
Q 004198 20 WDTDEDAPGPR--CGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPP 97 (769)
Q Consensus 20 w~~~~~~P~~R--~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P 97 (769)
++.+...|..+ +-+.+... ++.||+..|..+ .+.+.++|+.+++=..-... +
T Consensus 31 ~~vv~~~phd~~~ftqGL~~~------~~~LyestG~~g-----------------~S~v~~vD~~Tgkv~~~~~l---~ 84 (262)
T 3nol_A 31 YQIVHSYPHDTKAFTEGFFYR------NGYFYESTGLNG-----------------RSSIRKVDIESGKTLQQIEL---G 84 (262)
T ss_dssp EEEEEEEECCTTCEEEEEEEE------TTEEEEEEEETT-----------------EEEEEEECTTTCCEEEEEEC---C
T ss_pred eEEEEEecCCCCcccceEEEE------CCEEEEECCCCC-----------------CceEEEEECCCCcEEEEEec---C
Confidence 33333445433 33566655 679999988542 25799999999985544333 2
Q ss_pred cccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCc
Q 004198 98 SPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRV 177 (769)
Q Consensus 98 ~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~ 177 (769)
..-.+.+++..++.||+.... .+.+++||+.+.+ .-.+++. +-.|..++. .++.+|+.-|
T Consensus 85 ~~~FgeGit~~g~~ly~ltw~------~~~v~v~D~~t~~-~~~ti~~------~~eG~glt~-dg~~L~~SdG------ 144 (262)
T 3nol_A 85 KRYFGEGISDWKDKIVGLTWK------NGLGFVWNIRNLR-QVRSFNY------DGEGWGLTH-NDQYLIMSDG------ 144 (262)
T ss_dssp TTCCEEEEEEETTEEEEEESS------SSEEEEEETTTCC-EEEEEEC------SSCCCCEEE-CSSCEEECCS------
T ss_pred CccceeEEEEeCCEEEEEEee------CCEEEEEECccCc-EEEEEEC------CCCceEEec-CCCEEEEECC------
Confidence 233456678889999998663 4679999999832 2233322 225666643 4457777433
Q ss_pred cCceeEEeCCCCCceEEEcCCCC-CCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCC
Q 004198 178 LSDAWALDTAQKPYVWQRLNPEG-DRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAP 256 (769)
Q Consensus 178 ~~dv~~~d~~~~~~~W~~v~~~~-~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P 256 (769)
.+.++.+|+++.. .-..+.... ..|..... .....+|.+|+-- ...+++.++|..+...-.|...++..|
T Consensus 145 s~~i~~iDp~T~~-v~~~I~V~~~g~~~~~lN--ELe~~~G~lyan~------w~~~~I~vIDp~tG~V~~~Id~~~L~~ 215 (262)
T 3nol_A 145 TPVLRFLDPESLT-PVRTITVTAHGEELPELN--ELEWVDGEIFANV------WQTNKIVRIDPETGKVTGIIDLNGILA 215 (262)
T ss_dssp SSEEEEECTTTCS-EEEEEECEETTEECCCEE--EEEEETTEEEEEE------TTSSEEEEECTTTCBEEEEEECTTGGG
T ss_pred CCeEEEEcCCCCe-EEEEEEeccCCccccccc--eeEEECCEEEEEE------ccCCeEEEEECCCCcEEEEEECCcCcc
Confidence 3579999998752 223333211 11111111 1223488888632 124789999998776667777764432
Q ss_pred C-------cccceEEEEe--CCEEEEEecc
Q 004198 257 S-------PRYQHAAVFV--GARLHVTGGA 277 (769)
Q Consensus 257 ~-------~R~~hs~~~~--~~~i~V~GG~ 277 (769)
. .-.-.+.|+. .+++||.|-.
T Consensus 216 ~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 216 EAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp GSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred ccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 1 1233556665 5789998864
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=96.29 E-value=0.46 Score=55.52 Aligned_cols=124 Identities=16% Similarity=0.133 Sum_probs=73.5
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCc--EEEecCCCCCCcc-----cccceEEEECCEEEEECc
Q 004198 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRK--WTRIRPAGEPPSP-----RAAHAAAAVGTMVVFQGG 117 (769)
Q Consensus 45 ~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~--W~~l~~~g~~P~~-----R~~hs~~~~~~~Iyv~GG 117 (769)
+++||+... .+.++.+|..+++ |+.-........+ ....+.+..++.||+...
T Consensus 77 ~g~vyv~~~--------------------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~ 136 (677)
T 1kb0_A 77 DGIMYVSAS--------------------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW 136 (677)
T ss_dssp TTEEEEECG--------------------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT
T ss_pred CCEEEEECC--------------------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC
Confidence 788888754 2579999999875 9864332100000 112345567888888643
Q ss_pred cCCCCCCcCcEEEEEccCCcceEEEeeecCCCCC-CccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEc
Q 004198 118 IGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPG-PRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRL 196 (769)
Q Consensus 118 ~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~-~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v 196 (769)
...++++|..+.+..|+.-... ..+. .....+.++.+ +.+|+..+......-..++.||.++....|+.-
T Consensus 137 -------dg~l~alD~~tG~~~W~~~~~~-~~~~~~~~~~~p~v~~-~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 137 -------DGRLIALDAATGKEVWHQNTFE-GQKGSLTITGAPRVFK-GKVIIGNGGAEYGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp -------TSEEEEEETTTCCEEEEEETTT-TCCSSCBCCSCCEEET-TEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred -------CCEEEEEECCCCCEEeeecCCc-CcCcCcccccCcEEEC-CEEEEEecccccCCCCEEEEEECCCCcEEEEec
Confidence 2459999999988889875210 1111 11112232344 466664432222234679999999988889875
Q ss_pred C
Q 004198 197 N 197 (769)
Q Consensus 197 ~ 197 (769)
.
T Consensus 208 ~ 208 (677)
T 1kb0_A 208 S 208 (677)
T ss_dssp S
T ss_pred c
Confidence 4
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=96.17 E-value=0.74 Score=48.13 Aligned_cols=189 Identities=7% Similarity=0.016 Sum_probs=99.4
Q ss_pred CcEEEEECCCCcEEEecCCCCCC-cccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPP-SPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPR 153 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P-~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R 153 (769)
+.++++|+.+++-...-..+... ....-+.++..++++|+..- + ..+.+.++|+.+.+ .......+..|
T Consensus 105 ~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~-~----~~~~v~viD~~t~~--~~~~i~~g~~p--- 174 (328)
T 3dsm_A 105 YRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCW-S----YQNRILKIDTETDK--VVDELTIGIQP--- 174 (328)
T ss_dssp SEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEEC-T----TCCEEEEEETTTTE--EEEEEECSSCB---
T ss_pred CeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcC-C----CCCEEEEEECCCCe--EEEEEEcCCCc---
Confidence 57999999998755322222200 00122345557889999742 0 23579999999843 33322223222
Q ss_pred cccEEEEECCcEEEEEecCCCCCc-----cCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEec-CCEEEEEcccCC
Q 004198 154 YGHVMDLVSQRYLVSVSGNDGKRV-----LSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARS-DGMFLLCGGRDA 227 (769)
Q Consensus 154 ~~hs~~~~~~~~l~v~GG~~~~~~-----~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~-~g~l~v~GG~~~ 227 (769)
+.+++..++++|+....+.... .+.++++|+.+. +..+.-.. |....-+..+... ++.+|+..+
T Consensus 175 --~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~--~v~~~~~~---~~g~~p~~la~~~d~~~lyv~~~--- 244 (328)
T 3dsm_A 175 --TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETF--TVEKQFKF---KLGDWPSEVQLNGTRDTLYWINN--- 244 (328)
T ss_dssp --CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTT--EEEEEEEC---CTTCCCEEEEECTTSCEEEEESS---
T ss_pred --cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCC--eEEEEEec---CCCCCceeEEEecCCCEEEEEcc---
Confidence 2344445557776543221111 367999999887 44322111 1111123344443 567887542
Q ss_pred CCCcccceEEEecCCCCceEEEeCCCCCCC-cccceEEEE--eCCEEEEEecccCCCCcccCCCcEEEEECCCC
Q 004198 228 SGAPLADAYGLLMHRNGQWEWTLAPGVAPS-PRYQHAAVF--VGARLHVTGGALRGGRAIEGEAAVAVLDTAAG 298 (769)
Q Consensus 228 ~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~-~R~~hs~~~--~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~ 298 (769)
.++.+|..+. +.... ...+. ...-.++++ .++.+||...... ...+.|.+||++..
T Consensus 245 ------~v~~~d~~t~---~~~~~-~~~~~~~~~p~gi~vdp~~g~lyva~~~~y-----~~~~~V~v~d~~g~ 303 (328)
T 3dsm_A 245 ------DIWRMPVEAD---RVPVR-PFLEFRDTKYYGLTVNPNNGEVYVADAIDY-----QQQGIVYRYSPQGK 303 (328)
T ss_dssp ------SEEEEETTCS---SCCSS-CSBCCCSSCEEEEEECTTTCCEEEEECTTS-----SSEEEEEEECTTCC
T ss_pred ------EEEEEECCCC---ceeee-eeecCCCCceEEEEEcCCCCeEEEEccccc-----ccCCEEEEECCCCC
Confidence 6888888644 11111 11111 233445555 3788999862111 11456999999843
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=95.85 E-value=1.1 Score=51.24 Aligned_cols=124 Identities=13% Similarity=0.137 Sum_probs=72.6
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEEC-CCCc--EEEecCCCCCCc--c---cccceEEEECCEEEEEC
Q 004198 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDV-LTRK--WTRIRPAGEPPS--P---RAAHAAAAVGTMVVFQG 116 (769)
Q Consensus 45 ~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~-~~~~--W~~l~~~g~~P~--~---R~~hs~~~~~~~Iyv~G 116 (769)
+++||+.... .+.++++|. .+++ |+.-........ . ....+.+..++.||+..
T Consensus 62 ~g~vyv~~~~-------------------~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~ 122 (571)
T 2ad6_A 62 GDMMYVHSAF-------------------PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQ 122 (571)
T ss_dssp TTEEEEECST-------------------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEEC
T ss_pred CCEEEEEeCC-------------------CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEe
Confidence 7889887652 246999999 7765 986432210000 0 11223456688998875
Q ss_pred ccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC-ccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEE
Q 004198 117 GIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP-RYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQR 195 (769)
Q Consensus 117 G~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~-R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~ 195 (769)
. ...++++|..+.+..|+.-.. ..+.. ....+.++.+ ..+|+..+......-..++.||.++....|+.
T Consensus 123 ~-------dg~l~alD~~tG~~~W~~~~~--~~~~~~~~~~~P~v~~-g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 123 A-------NGHLLALDAKTGKINWEVEVC--DPKVGSTLTQAPFVAK-DTVLMGCSGAELGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp T-------TSEEEEEETTTCCEEEEEECC--CGGGTCBCCSCCEEET-TEEEEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred C-------CCEEEEEECCCCCEEEEecCC--CCCccceeccCCEEEC-CEEEEEecCCccCCCCEEEEEECCCCcEEEEE
Confidence 3 245999999998888986521 11110 1111222344 46666443211112357999999998888976
Q ss_pred cC
Q 004198 196 LN 197 (769)
Q Consensus 196 v~ 197 (769)
-.
T Consensus 193 ~~ 194 (571)
T 2ad6_A 193 FA 194 (571)
T ss_dssp ES
T ss_pred cc
Confidence 54
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=95.76 E-value=0.16 Score=51.86 Aligned_cols=189 Identities=9% Similarity=-0.050 Sum_probs=111.2
Q ss_pred ccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccccceEEEECCE
Q 004198 32 GHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTM 111 (769)
Q Consensus 32 ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~ 111 (769)
.+.+... ++.||+..|.. +.+.++|+.+++=..-. . |..-.+.+++..++.
T Consensus 57 tqGL~~~------~~~Ly~stG~~-------------------g~v~~iD~~Tgkv~~~~-l---~~~~FgeGit~~g~~ 107 (268)
T 3nok_A 57 TQGLVFH------QGHFFESTGHQ-------------------GTLRQLSLESAQPVWME-R---LGNIFAEGLASDGER 107 (268)
T ss_dssp EEEEEEE------TTEEEEEETTT-------------------TEEEECCSSCSSCSEEE-E---CTTCCEEEEEECSSC
T ss_pred cceEEEE------CCEEEEEcCCC-------------------CEEEEEECCCCcEEeEE-C---CCCcceeEEEEeCCE
Confidence 3555555 78999998853 34899999988643322 2 222345667888899
Q ss_pred EEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCc
Q 004198 112 VVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPY 191 (769)
Q Consensus 112 Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~ 191 (769)
||+.... .+.+++||+.+.+ .-.+++. +-.|..++.-+ +.+|+.-| .+.++.+|+++..
T Consensus 108 Ly~ltw~------~~~v~V~D~~Tl~-~~~ti~~------~~eGwGLt~Dg-~~L~vSdG------s~~l~~iDp~T~~- 166 (268)
T 3nok_A 108 LYQLTWT------EGLLFTWSGMPPQ-RERTTRY------SGEGWGLCYWN-GKLVRSDG------GTMLTFHEPDGFA- 166 (268)
T ss_dssp EEEEESS------SCEEEEEETTTTE-EEEEEEC------SSCCCCEEEET-TEEEEECS------SSEEEEECTTTCC-
T ss_pred EEEEEcc------CCEEEEEECCcCc-EEEEEeC------CCceeEEecCC-CEEEEECC------CCEEEEEcCCCCe-
Confidence 9998663 4679999999832 1233322 23456665444 58888644 3579999998862
Q ss_pred eEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCC--------CcccceE
Q 004198 192 VWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAP--------SPRYQHA 263 (769)
Q Consensus 192 ~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P--------~~R~~hs 263 (769)
.-..+... ..+.+-..-......+|.+|+-- ...+++..+|..+...-.|..+.+..| ..-.-.+
T Consensus 167 v~~~I~V~-~~g~~v~~lNeLe~~dG~lyanv------w~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNG 239 (268)
T 3nok_A 167 LVGAVQVK-LRGQPVELINELECANGVIYANI------WHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNG 239 (268)
T ss_dssp EEEEEECE-ETTEECCCEEEEEEETTEEEEEE------TTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEE
T ss_pred EEEEEEeC-CCCcccccccccEEeCCEEEEEE------CCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEE
Confidence 22333321 11122111122233488888621 124688999998765667777653211 1112244
Q ss_pred EEEe--CCEEEEEecc
Q 004198 264 AVFV--GARLHVTGGA 277 (769)
Q Consensus 264 ~~~~--~~~i~V~GG~ 277 (769)
.|.. ++++||.|-.
T Consensus 240 IA~dp~~~rlfVTGK~ 255 (268)
T 3nok_A 240 IAVEPGSGRIFMTGKL 255 (268)
T ss_dssp EEECTTTCCEEEEETT
T ss_pred EEEcCCCCEEEEeCCC
Confidence 5554 5788888754
|
| >4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A* | Back alignment and structure |
|---|
Probab=95.73 E-value=0.01 Score=65.52 Aligned_cols=50 Identities=16% Similarity=0.139 Sum_probs=35.8
Q ss_pred EEEEccCCCC------------HHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHH
Q 004198 583 VKVFGDLHGQ------------FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLL 638 (769)
Q Consensus 583 i~viGDiHG~------------~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~ 638 (769)
|+.++|+|-. +..|.++++.+.....+ -+|+.||++|++.-+.+++..++
T Consensus 79 ilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D------~VliaGDLfd~~~ps~~a~~~~~ 140 (472)
T 4fbk_A 79 ILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVD------MILLGGDIFHDNKPSRKALYQAL 140 (472)
T ss_dssp EEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCS------EEEECSCSBSSSSCCHHHHHHHH
T ss_pred EEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCC------EEEEcCccccCCCCCHHHHHHHH
Confidence 8999999974 33566666655422222 68889999999999888776543
|
| >3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.68 E-value=0.01 Score=65.12 Aligned_cols=71 Identities=24% Similarity=0.219 Sum_probs=48.6
Q ss_pred EEEEccCCCCH------------HHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhc-------
Q 004198 583 VKVFGDLHGQF------------GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIE------- 643 (769)
Q Consensus 583 i~viGDiHG~~------------~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~------- 643 (769)
|+.++|+|-.. ..|.++++.+.....+ -+|+.||++|++..+.+++..++.+-.+
T Consensus 35 ilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D------~VliaGDlfd~~~~~~~~~~~~~~~L~r~~~~~~~ 108 (431)
T 3t1i_A 35 ILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVD------FILLGGDLFHENKPSRKTLHTCLELLRKYCMGDRP 108 (431)
T ss_dssp EEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCS------EEEECSCCBSSSSCCHHHHHHHHHHHHHHHBCSSC
T ss_pred EEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCC------EEEEcCccccCCCCCHHHHHHHHHHHHHHhccCCc
Confidence 89999999532 3555666554322222 6888999999999888777655443221
Q ss_pred -----------------------------CCCceEEecCCcchhh
Q 004198 644 -----------------------------YPENVHLIRGNHEAAD 659 (769)
Q Consensus 644 -----------------------------~p~~v~llrGNHE~~~ 659 (769)
..-.|+++.||||...
T Consensus 109 ~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~~ 153 (431)
T 3t1i_A 109 VQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDPT 153 (431)
T ss_dssp CCCEECSCC------------------CCBCSCEEECCCSSSCCB
T ss_pred ccceeccchhhccccccccccccccccccCCCcEEEEccCCCCcc
Confidence 1346999999999763
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C | Back alignment and structure |
|---|
Probab=95.68 E-value=0.0053 Score=66.72 Aligned_cols=69 Identities=19% Similarity=0.210 Sum_probs=44.5
Q ss_pred CEEEEccCCCCHH----------------HHHHHHHHhCCCCCCCCCcceeEEEecccc-CCCCChHHHH----HHHHHh
Q 004198 582 PVKVFGDLHGQFG----------------DLMRLFDEYGFPSTAGDITYIDYLFLGDYV-DRGQHSLETI----TLLLAL 640 (769)
Q Consensus 582 ~i~viGDiHG~~~----------------~l~~~l~~~~~~~~~~~~~~~~~vfLGD~v-DrG~~s~e~l----~ll~~l 640 (769)
.++.++|+|.... .|.++++.+.....+ -+|+.||++ |++..+.+.+ .+|..|
T Consensus 2 rilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D------~vliaGDl~hd~~~~~~~~~~~~~~~l~~l 75 (379)
T 3tho_B 2 KILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVD------LILLTGDLLHSRNNPSVVALHDLLDYLKRM 75 (379)
T ss_dssp EEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCS------EEEECSCCBSCSSSCCHHHHHHHHHHHHHH
T ss_pred eEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCC------EEEECCCccccCCCCCHHHHHHHHHHHHHH
Confidence 3788999997543 445555443211112 578899999 8887765544 334444
Q ss_pred hhcCCCceEEecCCcchh
Q 004198 641 KIEYPENVHLIRGNHEAA 658 (769)
Q Consensus 641 k~~~p~~v~llrGNHE~~ 658 (769)
+.. -.++++.||||..
T Consensus 76 ~~~--~~v~~i~GNHD~~ 91 (379)
T 3tho_B 76 MRT--APVVVLPGNQDWK 91 (379)
T ss_dssp HHH--SCEEECCCTTSCT
T ss_pred HhC--CCEEEEcCCCccc
Confidence 433 4699999999954
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=95.59 E-value=0.75 Score=49.46 Aligned_cols=188 Identities=13% Similarity=0.062 Sum_probs=93.5
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
+.++++|+.+++..+....+...........+.+ ++.+|+.|+. ...+++||+.+.+..+ .+.. ..
T Consensus 144 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~------d~~v~~~d~~~~~~~~-~~~~-----~~ 211 (433)
T 3bws_A 144 EGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQ------ANAVHVFDLKTLAYKA-TVDL-----TG 211 (433)
T ss_dssp SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGG------GTEEEEEETTTCCEEE-EEEC-----SS
T ss_pred CeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECC------CCEEEEEECCCceEEE-EEcC-----CC
Confidence 4699999999887765432110011111122233 5678877763 2468999998743222 2211 11
Q ss_pred ccccEEEEE-CCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCC-
Q 004198 153 RYGHVMDLV-SQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGA- 230 (769)
Q Consensus 153 R~~hs~~~~-~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~- 230 (769)
..-..++.. .++.+|+.++.++ .+.+||+.+. +....-.. ...-..+....++..+++++......
T Consensus 212 ~~~~~~~~~~~~~~l~~~~~~~~-----~i~~~d~~~~--~~~~~~~~-----~~~~~~~~~~~~g~~l~~~~~~~~~~~ 279 (433)
T 3bws_A 212 KWSKILLYDPIRDLVYCSNWISE-----DISVIDRKTK--LEIRKTDK-----IGLPRGLLLSKDGKELYIAQFSASNQE 279 (433)
T ss_dssp SSEEEEEEETTTTEEEEEETTTT-----EEEEEETTTT--EEEEECCC-----CSEEEEEEECTTSSEEEEEEEESCTTC
T ss_pred CCeeEEEEcCCCCEEEEEecCCC-----cEEEEECCCC--cEEEEecC-----CCCceEEEEcCCCCEEEEEECCCCccc
Confidence 112233333 3446767665443 6899999877 43332221 11123444456665555554432211
Q ss_pred -cccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe--CCEEEEEecccCCCCcccCCCcEEEEECCCCcEE
Q 004198 231 -PLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV--GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWL 301 (769)
Q Consensus 231 -~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~--~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~ 301 (769)
.-..++.++..+. ....... .+..-..+++. +..+|+.++. ...+.+||+.+.+-.
T Consensus 280 ~~dg~i~~~d~~~~-~~~~~~~-----~~~~~~~~~~~~~g~~l~~~~~~---------~~~v~v~d~~~~~~~ 338 (433)
T 3bws_A 280 SGGGRLGIYSMDKE-KLIDTIG-----PPGNKRHIVSGNTENKIYVSDMC---------CSKIEVYDLKEKKVQ 338 (433)
T ss_dssp SCCEEEEEEETTTT-EEEEEEE-----EEECEEEEEECSSTTEEEEEETT---------TTEEEEEETTTTEEE
T ss_pred cCCCeEEEEECCCC-cEEeecc-----CCCCcceEEECCCCCEEEEEecC---------CCEEEEEECCCCcEE
Confidence 1245677777643 2121110 01111223332 3467777653 245899999876543
|
| >4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B* | Back alignment and structure |
|---|
Probab=95.56 E-value=0.015 Score=63.66 Aligned_cols=51 Identities=16% Similarity=0.131 Sum_probs=36.3
Q ss_pred CEEEEccCCCC------------HHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHH
Q 004198 582 PVKVFGDLHGQ------------FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLL 638 (769)
Q Consensus 582 ~i~viGDiHG~------------~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~ 638 (769)
.++.++|+|-. +..|.++++.+.....+ -+|+.||++|++.-+.+++..++
T Consensus 15 rilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D------~VliaGDLfd~~~p~~~~~~~~~ 77 (417)
T 4fbw_A 15 RILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVD------MILLGGDIFHDNKPSRKALYQAL 77 (417)
T ss_dssp EEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCS------EEEECSCCBSSSSCCHHHHHHHH
T ss_pred EEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCC------EEEEcCccccCCCCCHHHHHHHH
Confidence 48999999975 34566666665322222 68889999999999888776543
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=95.55 E-value=0.84 Score=46.60 Aligned_cols=205 Identities=12% Similarity=0.046 Sum_probs=118.7
Q ss_pred ccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccccceEEEECCE
Q 004198 32 GHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTM 111 (769)
Q Consensus 32 ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~ 111 (769)
-|.+.+.+ +++||+..|... .+.+..+|+.+++=..--+. +....+.+++..++.
T Consensus 23 ~~Gl~~~~-----dg~Lyvstg~~~-----------------~s~v~~iD~~tg~v~~~i~l---~~~~fgeGi~~~g~~ 77 (266)
T 2iwa_A 23 TQGLVYAE-----NDTLFESTGLYG-----------------RSSVRQVALQTGKVENIHKM---DDSYFGEGLTLLNEK 77 (266)
T ss_dssp EEEEEECS-----TTEEEEEECSTT-----------------TCEEEEEETTTCCEEEEEEC---CTTCCEEEEEEETTE
T ss_pred cccEEEeC-----CCeEEEECCCCC-----------------CCEEEEEECCCCCEEEEEec---CCCcceEEEEEeCCE
Confidence 35666541 369999877421 36799999999985543332 222344567778899
Q ss_pred EEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCc
Q 004198 112 VVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPY 191 (769)
Q Consensus 112 Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~ 191 (769)
||+.... .+.+++||..+.+ .-.+++. + .| .+..++ .+++.+|+.-| .+.++.+|+++..
T Consensus 78 lyv~t~~------~~~v~viD~~t~~-v~~~i~~-g-~~---~g~glt-~Dg~~l~vs~g------s~~l~viD~~t~~- 137 (266)
T 2iwa_A 78 LYQVVWL------KNIGFIYDRRTLS-NIKNFTH-Q-MK---DGWGLA-TDGKILYGSDG------TSILYEIDPHTFK- 137 (266)
T ss_dssp EEEEETT------CSEEEEEETTTTE-EEEEEEC-C-SS---SCCEEE-ECSSSEEEECS------SSEEEEECTTTCC-
T ss_pred EEEEEec------CCEEEEEECCCCc-EEEEEEC-C-CC---CeEEEE-ECCCEEEEECC------CCeEEEEECCCCc-
Confidence 9998653 4669999998832 1223432 2 22 344443 35567887533 4679999998862
Q ss_pred eEEEcCCCC-CCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCC--------CCcccce
Q 004198 192 VWQRLNPEG-DRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVA--------PSPRYQH 262 (769)
Q Consensus 192 ~W~~v~~~~-~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~--------P~~R~~h 262 (769)
.-..+.... ..|..+.. .+. ..++.+|+--. ..+++..+|..+...-.|..+.+.. +..-.-+
T Consensus 138 v~~~I~Vg~~~~p~~~~n-ele-~~dg~lyvn~~------~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~n 209 (266)
T 2iwa_A 138 LIKKHNVKYNGHRVIRLN-ELE-YINGEVWANIW------QTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLN 209 (266)
T ss_dssp EEEEEECEETTEECCCEE-EEE-EETTEEEEEET------TSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEE
T ss_pred EEEEEEECCCCcccccce-eEE-EECCEEEEecC------CCCeEEEEECCCCcEEEEEECCCcccccccccccccCceE
Confidence 123333211 01111222 222 23788886421 2478999999876555666664221 1111225
Q ss_pred EEEEe--CCEEEEEecccCCCCcccCCCcEEEEECCCC
Q 004198 263 AAVFV--GARLHVTGGALRGGRAIEGEAAVAVLDTAAG 298 (769)
Q Consensus 263 s~~~~--~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~ 298 (769)
+.++. ++++||.|+.. +.++..++.+.
T Consensus 210 GIa~~~~~~~lfVTgk~~---------~~v~~i~l~~~ 238 (266)
T 2iwa_A 210 GIAWDQENKRIFVTGKLW---------PKLFEIKLHLV 238 (266)
T ss_dssp EEEEETTTTEEEEEETTC---------SEEEEEEEEEC
T ss_pred EEEEcCCCCEEEEECCCC---------CeEEEEEEecc
Confidence 55555 57899998853 34666665443
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=95.23 E-value=3.3 Score=48.08 Aligned_cols=124 Identities=15% Similarity=0.092 Sum_probs=72.7
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCc--EEEecCCCCCCc-----ccccceEEEECCEEEEECc
Q 004198 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRK--WTRIRPAGEPPS-----PRAAHAAAAVGTMVVFQGG 117 (769)
Q Consensus 45 ~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~--W~~l~~~g~~P~-----~R~~hs~~~~~~~Iyv~GG 117 (769)
+++||+... .+.++.+|..+++ |+.-........ .....+.+..+++||+...
T Consensus 66 ~g~vyv~~~--------------------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~ 125 (668)
T 1kv9_A 66 DGVIYTSMS--------------------WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL 125 (668)
T ss_dssp TTEEEEEEG--------------------GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT
T ss_pred CCEEEEECC--------------------CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC
Confidence 788888654 2479999998875 986432210000 0011234556788888643
Q ss_pred cCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcC
Q 004198 118 IGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLN 197 (769)
Q Consensus 118 ~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~ 197 (769)
...++.+|..+.+..|+.-.. ..........+.++.++ .+|+..+.........++.||.++....|+.-.
T Consensus 126 -------dg~l~alD~~tG~~~W~~~~~-~~~~~~~~~~~P~v~~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 126 -------DGRLIALDAKTGKAIWSQQTT-DPAKPYSITGAPRVVKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp -------TSEEEEEETTTCCEEEEEECS-CTTSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred -------CCEEEEEECCCCCEeeeeccC-CCCCcceecCCCEEECC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 245999999998888987531 11111111223334444 666643322222346799999999888898753
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=95.13 E-value=5.9 Score=46.12 Aligned_cols=115 Identities=13% Similarity=0.067 Sum_probs=65.4
Q ss_pred CcEEEEECCCCc--EEEecCCCCCCcc-----cccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecC
Q 004198 75 NSVHLYDVLTRK--WTRIRPAGEPPSP-----RAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQG 147 (769)
Q Consensus 75 ~dv~~yD~~~~~--W~~l~~~g~~P~~-----R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g 147 (769)
+.++.+|..+++ |+.-......... ....+.+..++.||+... ...++.+|..+.+..|+.-....
T Consensus 80 ~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~-------dg~l~AlDa~TG~~~W~~~~~~~ 152 (689)
T 1yiq_A 80 SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL-------DGRLEAIDAKTGQRAWSVDTRAD 152 (689)
T ss_dssp GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEECCSC
T ss_pred CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc-------CCEEEEEECCCCCEeeeecCcCC
Confidence 569999998875 9854322100000 011234566888888653 24599999999888898763201
Q ss_pred CCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcC
Q 004198 148 QGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLN 197 (769)
Q Consensus 148 ~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~ 197 (769)
.........+.++.++ .+|+..+......-..++.||.++....|+.-.
T Consensus 153 ~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 201 (689)
T 1yiq_A 153 HKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYT 201 (689)
T ss_dssp TTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEecc
Confidence 1010111122334444 666633221112345799999999988898653
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=95.04 E-value=2 Score=49.25 Aligned_cols=126 Identities=10% Similarity=0.074 Sum_probs=71.1
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEEC-CCCc--EEEecCCCCCCc--cc---ccceEEE--ECCE---
Q 004198 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDV-LTRK--WTRIRPAGEPPS--PR---AAHAAAA--VGTM--- 111 (769)
Q Consensus 45 ~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~-~~~~--W~~l~~~g~~P~--~R---~~hs~~~--~~~~--- 111 (769)
+++||+.+.. .+.++++|. .+++ |+.-........ .+ ...+.+. .++.
T Consensus 62 ~g~vyv~~~~-------------------~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~ 122 (599)
T 1w6s_A 62 DGKMYIHTSF-------------------PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPA 122 (599)
T ss_dssp TTEEEEECST-------------------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCC
T ss_pred CCEEEEEeCC-------------------CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCccee
Confidence 8899987652 246999999 7775 986433210000 11 1123344 4666
Q ss_pred -EEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCC
Q 004198 112 -VVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKP 190 (769)
Q Consensus 112 -Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~ 190 (769)
||+... ...++.+|..+.+..|+.-.. ...+......+-++.++ .+|+..+.........++.||.++..
T Consensus 123 rV~v~t~-------dg~l~AlDa~TG~~~W~~~~~-~~~~~~~~~ssP~v~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~ 193 (599)
T 1w6s_A 123 LILKTQL-------DGNVAALNAETGETVWKVENS-DIKVGSTLTIAPYVVKD-KVIIGSSGAELGVRGYLTAYDVKTGE 193 (599)
T ss_dssp EEEEECT-------TSEEEEEETTTCCEEEEEECC-CGGGTCBCCSCCEEETT-EEEECCBCGGGTCCCEEEEEETTTCC
T ss_pred EEEEEcC-------CCEEEEEECCCCCEEEeecCC-CCCccceeecCCEEECC-EEEEEecccccCCCCeEEEEECCCCc
Confidence 887543 245999999998888986521 10000011112234444 66654321111234579999999988
Q ss_pred ceEEEcCC
Q 004198 191 YVWQRLNP 198 (769)
Q Consensus 191 ~~W~~v~~ 198 (769)
..|+.-..
T Consensus 194 ~~W~~~~~ 201 (599)
T 1w6s_A 194 QVWRAYAT 201 (599)
T ss_dssp EEEEEESS
T ss_pred EEEEEcCC
Confidence 88987543
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=94.96 E-value=3 Score=42.37 Aligned_cols=183 Identities=13% Similarity=0.173 Sum_probs=97.8
Q ss_pred CCcEEEEECCCCc--EEEecCCCCCCcccccceEEE-ECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCC
Q 004198 74 TNSVHLYDVLTRK--WTRIRPAGEPPSPRAAHAAAA-VGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGP 150 (769)
Q Consensus 74 ~~dv~~yD~~~~~--W~~l~~~g~~P~~R~~hs~~~-~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p 150 (769)
.+.++.+|..+++ |+.-...+ ...|.++. -++.+++.+ .+.++.||+ +.+..|+.-. +
T Consensus 14 ~~~v~~~d~~tG~~~w~~~~~~~-----~~~~~~~~~pdG~ilvs~--------~~~V~~~d~-~G~~~W~~~~-----~ 74 (276)
T 3no2_A 14 WNKIAIINKDTKEIVWEYPLEKG-----WECNSVAATKAGEILFSY--------SKGAKMITR-DGRELWNIAA-----P 74 (276)
T ss_dssp CSEEEEEETTTTEEEEEEECCTT-----CCCCEEEECTTSCEEEEC--------BSEEEEECT-TSCEEEEEEC-----C
T ss_pred CCEEEEEECCCCeEEEEeCCCcc-----CCCcCeEECCCCCEEEeC--------CCCEEEECC-CCCEEEEEcC-----C
Confidence 3678999998775 77543210 12244444 356777732 245999999 6556787542 2
Q ss_pred CCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCC-CCCCcccccEEEEecCCEEEEEcccCCCC
Q 004198 151 GPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEG-DRPSARMYATASARSDGMFLLCGGRDASG 229 (769)
Q Consensus 151 ~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~-~~P~~r~~hsa~~~~~g~l~v~GG~~~~~ 229 (769)
....-+++....++.+++....+ ...++.+|.+.+ ..|+.....+ ..+... .+.+....+|.+++....
T Consensus 75 ~~~~~~~~~~~~dG~~lv~~~~~----~~~v~~vd~~Gk-~l~~~~~~~~~~~~~~~-~~~v~~~~~G~~lv~~~~---- 144 (276)
T 3no2_A 75 AGCEMQTARILPDGNALVAWCGH----PSTILEVNMKGE-VLSKTEFETGIERPHAQ-FRQINKNKKGNYLVPLFA---- 144 (276)
T ss_dssp TTCEEEEEEECTTSCEEEEEEST----TEEEEEECTTSC-EEEEEEECCSCSSGGGS-CSCCEECTTSCEEEEETT----
T ss_pred CCccccccEECCCCCEEEEecCC----CCEEEEEeCCCC-EEEEEeccCCCCccccc-ccCceECCCCCEEEEecC----
Confidence 12233455555555666654321 235788887443 4555432211 111111 122334456666665431
Q ss_pred CcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCC--cEEec
Q 004198 230 APLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAG--VWLDR 303 (769)
Q Consensus 230 ~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~--~W~~~ 303 (769)
-..+..||.. ++..|....+..| ++++.. ++.++|.+.. ...+..||++++ .|+.-
T Consensus 145 --~~~v~~~d~~--G~~~w~~~~~~~~-----~~~~~~~~g~~~v~~~~---------~~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 145 --TSEVREIAPN--GQLLNSVKLSGTP-----FSSAFLDNGDCLVACGD---------AHCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp --TTEEEEECTT--SCEEEEEECSSCC-----CEEEECTTSCEEEECBT---------TSEEEEECTTTCCEEEEEE
T ss_pred --CCEEEEECCC--CCEEEEEECCCCc-----cceeEcCCCCEEEEeCC---------CCeEEEEeCcCCcEEEEec
Confidence 2457788876 5555554433222 334444 6778777652 234899999865 46654
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=94.58 E-value=5.7 Score=45.27 Aligned_cols=122 Identities=19% Similarity=0.274 Sum_probs=69.9
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCc--EEEecCCCCCCccc---ccceEEEECCEEEEECccC
Q 004198 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRK--WTRIRPAGEPPSPR---AAHAAAAVGTMVVFQGGIG 119 (769)
Q Consensus 45 ~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~--W~~l~~~g~~P~~R---~~hs~~~~~~~Iyv~GG~~ 119 (769)
+++||+.... +.++++|..+++ |+.-........+. ...+.+..++.||+...
T Consensus 68 ~g~vyv~~~~--------------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~-- 125 (582)
T 1flg_A 68 DGVIYVTASY--------------------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL-- 125 (582)
T ss_dssp TTEEEEEETT--------------------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET--
T ss_pred CCEEEEEcCC--------------------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC--
Confidence 8889887652 239999998875 98754321100011 11334567888888532
Q ss_pred CCCCCcCcEEEEEccCCcceEEEeeecCCCCCCcc--ccEEEEECC----cEEEEEecCCC-CCccCceeEEeCCCCCce
Q 004198 120 PAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRY--GHVMDLVSQ----RYLVSVSGNDG-KRVLSDAWALDTAQKPYV 192 (769)
Q Consensus 120 ~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~--~hs~~~~~~----~~l~v~GG~~~-~~~~~dv~~~d~~~~~~~ 192 (769)
...++.+|..+.+..|+.-.. . +...+ ..+-++.++ +.++++|...+ ......++.||.++....
T Consensus 126 -----dg~l~AlD~~TG~~~W~~~~~--~-~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~ 197 (582)
T 1flg_A 126 -----DASVVALNKNTGKVVWKKKFA--D-HGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEI 197 (582)
T ss_dssp -----TTEEEEEESSSCCEEEEEECS--C-GGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEE
T ss_pred -----CCEEEEEECCCCCEEeeecCC--C-CCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEE
Confidence 245999999998888986531 1 11111 112222332 11334443211 123457999999998889
Q ss_pred EEEc
Q 004198 193 WQRL 196 (769)
Q Consensus 193 W~~v 196 (769)
|+.-
T Consensus 198 W~~~ 201 (582)
T 1flg_A 198 WMRP 201 (582)
T ss_dssp EEEE
T ss_pred eecC
Confidence 9764
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=94.32 E-value=3.1 Score=44.91 Aligned_cols=227 Identities=11% Similarity=0.010 Sum_probs=112.4
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCcc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRY 154 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~ 154 (769)
..++.+|.....-..+.... ......+..-++..+++++... ....++++|+.+. +...+. ..+. .
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~----~~v~~~~~Spdg~~la~~s~~~---~~~~i~~~d~~tg--~~~~l~---~~~~--~ 224 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSP----QPLMSPAWSPDGSKLAYVTFES---GRSALVIQTLANG--AVRQVA---SFPR--H 224 (415)
T ss_dssp EEEEEEETTSCSCEEEEEES----SCEEEEEECTTSSEEEEEECTT---SSCEEEEEETTTC--CEEEEE---CCSS--C
T ss_pred ceEEEEcCCCCCCEEEeCCC----CcceeeEEcCCCCEEEEEEecC---CCcEEEEEECCCC--cEEEee---cCCC--c
Confidence 57899999876655554221 0111111111343344443321 1257999999984 455553 1111 1
Q ss_pred ccEEEEE-CCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCccc
Q 004198 155 GHVMDLV-SQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLA 233 (769)
Q Consensus 155 ~hs~~~~-~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~ 233 (769)
-.+.... +++.|++.+..++ ...+|.+|+.+. +...+... .....+.....++..+++++.... ..
T Consensus 225 ~~~~~~spdg~~la~~~~~~g---~~~i~~~d~~~~--~~~~l~~~-----~~~~~~~~~spdg~~l~~~s~~~g---~~ 291 (415)
T 2hqs_A 225 NGAPAFSPDGSKLAFALSKTG---SLNLYVMDLASG--QIRQVTDG-----RSNNTEPTWFPDSQNLAFTSDQAG---RP 291 (415)
T ss_dssp EEEEEECTTSSEEEEEECTTS---SCEEEEEETTTC--CEEECCCC-----SSCEEEEEECTTSSEEEEEECTTS---SC
T ss_pred ccCEEEcCCCCEEEEEEecCC---CceEEEEECCCC--CEEeCcCC-----CCcccceEECCCCCEEEEEECCCC---Cc
Confidence 2233233 3334554554333 246999999887 55555432 111223334467765565543211 24
Q ss_pred ceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccCCccCCCC
Q 004198 234 DAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRT 312 (769)
Q Consensus 234 d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~ 312 (769)
.+|.++.... ....... ......+.++- +++.+++++...+ ...++++|+.+++...+...
T Consensus 292 ~i~~~d~~~~---~~~~l~~---~~~~~~~~~~spdG~~l~~~~~~~g------~~~i~~~d~~~~~~~~l~~~------ 353 (415)
T 2hqs_A 292 QVYKVNINGG---APQRITW---EGSQNQDADVSSDGKFMVMVSSNGG------QQHIAKQDLATGGVQVLSST------ 353 (415)
T ss_dssp EEEEEETTSS---CCEECCC---SSSEEEEEEECTTSSEEEEEEECSS------CEEEEEEETTTCCEEECCCS------
T ss_pred EEEEEECCCC---CEEEEec---CCCcccCeEECCCCCEEEEEECcCC------ceEEEEEECCCCCEEEecCC------
Confidence 6888887644 2122211 11222223332 5555555553321 24699999999887665432
Q ss_pred CCCCCCCCCccCcccccceEEEEeCCEEEEEcCcCCCccccceEEecCCC
Q 004198 313 SKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLDDFLVAENSP 362 (769)
Q Consensus 313 ~~~~~~~~~~~~~~~R~~hs~~~~~~~iyv~GG~~~~~~~~D~~~ld~~~ 362 (769)
......++.-+++.+++++.++. ...+|.+|+..
T Consensus 354 --------------~~~~~~~~spdg~~l~~~s~~~~--~~~l~~~d~~g 387 (415)
T 2hqs_A 354 --------------FLDETPSLAPNGTMVIYSSSQGM--GSVLNLVSTDG 387 (415)
T ss_dssp --------------SSCEEEEECTTSSEEEEEEEETT--EEEEEEEETTS
T ss_pred --------------CCcCCeEEcCCCCEEEEEEcCCC--ccEEEEEECCC
Confidence 11112222334566666665442 23577777654
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=94.18 E-value=4.4 Score=41.35 Aligned_cols=185 Identities=11% Similarity=0.038 Sum_probs=91.2
Q ss_pred CCcEEEEECCCCcEEEecCCCCCCcccccceEEE-E-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCC
Q 004198 74 TNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAA-V-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPG 151 (769)
Q Consensus 74 ~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~-~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~ 151 (769)
.+.+.+||+.+++.......+.. + ..++. - ++.+|+.+.. .+.++++|+.+....-..+.. +..|
T Consensus 19 ~~~v~~~d~~~~~~~~~~~~~~~--~---~~~~~s~dg~~l~~~~~~------~~~i~~~d~~~~~~~~~~~~~-~~~~- 85 (331)
T 3u4y_A 19 LRRISFFSTDTLEILNQITLGYD--F---VDTAITSDCSNVVVTSDF------CQTLVQIETQLEPPKVVAIQE-GQSS- 85 (331)
T ss_dssp GTEEEEEETTTCCEEEEEECCCC--E---EEEEECSSSCEEEEEEST------TCEEEEEECSSSSCEEEEEEE-CSSC-
T ss_pred CCeEEEEeCcccceeeeEEccCC--c---ceEEEcCCCCEEEEEeCC------CCeEEEEECCCCceeEEeccc-CCCC-
Confidence 36899999999988765443211 1 12222 2 3467776652 237999999885421222221 2222
Q ss_pred CccccEEEEE-CCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCE-EEEEcccCCCC
Q 004198 152 PRYGHVMDLV-SQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGM-FLLCGGRDASG 229 (769)
Q Consensus 152 ~R~~hs~~~~-~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~-l~v~GG~~~~~ 229 (769)
.+.+++. +++.+| .+...+ ....++++|+.+. +.......+ ...+......++. +|+.+...
T Consensus 86 ---~~~~~~s~dg~~l~-~~~~~~--~~~~i~v~d~~~~--~~~~~~~~~-----~~~~~~~~spdg~~l~~~~~~~--- 149 (331)
T 3u4y_A 86 ---MADVDITPDDQFAV-TVTGLN--HPFNMQSYSFLKN--KFISTIPIP-----YDAVGIAISPNGNGLILIDRSS--- 149 (331)
T ss_dssp ---CCCEEECTTSSEEE-ECCCSS--SSCEEEEEETTTT--EEEEEEECC-----TTEEEEEECTTSSCEEEEEETT---
T ss_pred ---ccceEECCCCCEEE-EecCCC--CcccEEEEECCCC--CeEEEEECC-----CCccceEECCCCCEEEEEecCC---
Confidence 1213233 344566 332221 1137999999887 433322221 1225555667774 66654421
Q ss_pred Ccccc-eEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CC-EEEEEecccCCCCcccCCCcEEEEECCCCcE
Q 004198 230 APLAD-AYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GA-RLHVTGGALRGGRAIEGEAAVAVLDTAAGVW 300 (769)
Q Consensus 230 ~~l~d-~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~-~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W 300 (769)
+. ++.|+...++...... ....+....-+.+++. ++ .+|+.+.. .+.+.+||+.+.+.
T Consensus 150 ---~~~i~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~spdg~~l~v~~~~---------~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 150 ---ANTVRRFKIDADGVLFDTG-QEFISGGTRPFNITFTPDGNFAFVANLI---------GNSIGILETQNPEN 210 (331)
T ss_dssp ---TTEEEEEEECTTCCEEEEE-EEEECSSSSEEEEEECTTSSEEEEEETT---------TTEEEEEECSSTTS
T ss_pred ---CceEEEEEECCCCcEeecC-CccccCCCCccceEECCCCCEEEEEeCC---------CCeEEEEECCCCcc
Confidence 23 4555554433322111 0000111112334443 34 57776532 24589999987764
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* | Back alignment and structure |
|---|
Probab=94.04 E-value=0.048 Score=56.64 Aligned_cols=71 Identities=17% Similarity=0.079 Sum_probs=38.7
Q ss_pred CEEEEccCCCCH---------HHHHHHHHH-hCCCCCCCCCcceeEEEeccccCC-CC---ChHHHHHHHHHhhh--cC-
Q 004198 582 PVKVFGDLHGQF---------GDLMRLFDE-YGFPSTAGDITYIDYLFLGDYVDR-GQ---HSLETITLLLALKI--EY- 644 (769)
Q Consensus 582 ~i~viGDiHG~~---------~~l~~~l~~-~~~~~~~~~~~~~~~vfLGD~vDr-G~---~s~e~l~ll~~lk~--~~- 644 (769)
.+.++||+|... .++.+.+.. +.....+ -+|++||+++. |. ...+....+..+.. ..
T Consensus 8 ~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~d------~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~ 81 (313)
T 1ute_A 8 RFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGAD------FILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLR 81 (313)
T ss_dssp EEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCS------EEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGT
T ss_pred EEEEEcccCCCCCccccCchHHHHHHHHHHHHHhcCCC------EEEECCCccCcCCCCCcchHHHHHHHHHHcCchhhc
Confidence 389999999863 244444332 1111111 57889999753 21 11233333322110 12
Q ss_pred CCceEEecCCcchh
Q 004198 645 PENVHLIRGNHEAA 658 (769)
Q Consensus 645 p~~v~llrGNHE~~ 658 (769)
+-.++++.||||..
T Consensus 82 ~~p~~~v~GNHD~~ 95 (313)
T 1ute_A 82 NVPWHVLAGNHDHL 95 (313)
T ss_dssp TCCEEECCCHHHHH
T ss_pred CCCEEEECCCCccC
Confidence 35799999999974
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* | Back alignment and structure |
|---|
Probab=93.96 E-value=0.073 Score=58.49 Aligned_cols=70 Identities=20% Similarity=0.203 Sum_probs=41.4
Q ss_pred EEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCC------h-HHHHHHHHHhhhcCCCceEEecCCc
Q 004198 583 VKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQH------S-LETITLLLALKIEYPENVHLIRGNH 655 (769)
Q Consensus 583 i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~------s-~e~l~ll~~lk~~~p~~v~llrGNH 655 (769)
+.++||+|...... ++++.+.......+ -+|++||+++.+.. . -+...++..+... -.++.+.|||
T Consensus 122 f~~igD~~~~~~~~-~~l~~~~~~~~~~D----~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~~~~--~P~~~v~GNH 194 (424)
T 2qfp_A 122 FGLIGDLGQSFDSN-TTLSHYELSPKKGQ----TVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAY--QPWIWTAGNH 194 (424)
T ss_dssp EEEECSCTTBHHHH-HHHHHHHTCSSCCC----EEEECSCCSCGGGSGGGCTHHHHHHHHHHHHHHTT--SCEEECCCHH
T ss_pred EEEEEeCCCCCChH-HHHHHHHhCCCCCC----EEEEcCccccccccccccchHHHHHHHHHHHHHhc--CCeEeecCCc
Confidence 88999999887544 23444322110111 57889999986421 1 1223344444333 3589999999
Q ss_pred chhh
Q 004198 656 EAAD 659 (769)
Q Consensus 656 E~~~ 659 (769)
|...
T Consensus 195 D~~~ 198 (424)
T 2qfp_A 195 EIEF 198 (424)
T ss_dssp HHCC
T ss_pred cccc
Confidence 9753
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=93.93 E-value=1.4 Score=44.13 Aligned_cols=141 Identities=18% Similarity=0.146 Sum_probs=88.3
Q ss_pred CcccccceeecCCCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEec
Q 004198 12 SYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIR 91 (769)
Q Consensus 12 ~y~~~~~~w~~~~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~ 91 (769)
.+|+.+++-...-++|..-+|..++.. +++||+.... .+.+++||+.+.+-..--
T Consensus 47 ~vD~~tgkv~~~~~l~~~~fgeGi~~~------~~~ly~ltw~-------------------~~~v~v~D~~tl~~~~ti 101 (243)
T 3mbr_X 47 KVDLETGRILQRAEVPPPYFGAGIVAW------RDRLIQLTWR-------------------NHEGFVYDLATLTPRARF 101 (243)
T ss_dssp EEETTTCCEEEEEECCTTCCEEEEEEE------TTEEEEEESS-------------------SSEEEEEETTTTEEEEEE
T ss_pred EEECCCCCEEEEEeCCCCcceeEEEEe------CCEEEEEEee-------------------CCEEEEEECCcCcEEEEE
Confidence 356666666666567777889999998 8899998542 478999999987644322
Q ss_pred CCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCc-cccEEEEECCcEEEEEe
Q 004198 92 PAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPR-YGHVMDLVSQRYLVSVS 170 (769)
Q Consensus 92 ~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R-~~hs~~~~~~~~l~v~G 170 (769)
+ .+..+.+++.-++.+|+.-| .+.++.+|+.+.+ .-.++.+ +..+.+. .---+...+ +.+|+--
T Consensus 102 ~-----~~~~Gwglt~dg~~L~vSdg-------s~~l~~iDp~t~~-~~~~I~V-~~~g~~~~~lNeLe~~~-G~lyanv 166 (243)
T 3mbr_X 102 R-----YPGEGWALTSDDSHLYMSDG-------TAVIRKLDPDTLQ-QVGSIKV-TAGGRPLDNLNELEWVN-GELLANV 166 (243)
T ss_dssp E-----CSSCCCEEEECSSCEEEECS-------SSEEEEECTTTCC-EEEEEEC-EETTEECCCEEEEEEET-TEEEEEE
T ss_pred e-----CCCCceEEeeCCCEEEEECC-------CCeEEEEeCCCCe-EEEEEEE-ccCCcccccceeeEEeC-CEEEEEE
Confidence 1 22356777777788998654 3569999999832 2344433 2222221 112333344 4777532
Q ss_pred cCCCCCccCceeEEeCCCCCc-eEEEcC
Q 004198 171 GNDGKRVLSDAWALDTAQKPY-VWQRLN 197 (769)
Q Consensus 171 G~~~~~~~~dv~~~d~~~~~~-~W~~v~ 197 (769)
- ..+++.+.|+++... .|-.+.
T Consensus 167 w-----~s~~I~vIDp~tG~V~~~idl~ 189 (243)
T 3mbr_X 167 W-----LTSRIARIDPASGKVVAWIDLQ 189 (243)
T ss_dssp T-----TTTEEEEECTTTCBEEEEEECG
T ss_pred C-----CCCeEEEEECCCCCEEEEEECC
Confidence 1 246899999988732 354443
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=93.58 E-value=4.9 Score=42.15 Aligned_cols=177 Identities=16% Similarity=0.189 Sum_probs=91.0
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
+.++++|+.+++-...-..+. .-.+++.. ++.||+.|+. ...+.++|+.+.. .......+ .
T Consensus 12 ~~v~v~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~~------d~~i~v~d~~~~~--~~~~~~~~---~- 74 (391)
T 1l0q_A 12 DNISVIDVTSNKVTATIPVGS-----NPMGAVISPDGTKVYVANAH------SNDVSIIDTATNN--VIATVPAG---S- 74 (391)
T ss_dssp TEEEEEETTTTEEEEEEECSS-----SEEEEEECTTSSEEEEEEGG------GTEEEEEETTTTE--EEEEEECS---S-
T ss_pred CEEEEEECCCCeEEEEeecCC-----CcceEEECCCCCEEEEECCC------CCeEEEEECCCCe--EEEEEECC---C-
Confidence 579999999887554322211 11233332 3477777754 2469999998843 33332111 1
Q ss_pred ccccEEEEE-CCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCC-EEEEEcccCCCCC
Q 004198 153 RYGHVMDLV-SQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDG-MFLLCGGRDASGA 230 (769)
Q Consensus 153 R~~hs~~~~-~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g-~l~v~GG~~~~~~ 230 (769)
.-..++.. .++.+++.|..+ +.+++||+.++ +........ ....+.....++ .+|+.++.+
T Consensus 75 -~v~~~~~spdg~~l~~~~~~~-----~~v~v~d~~~~--~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~~---- 137 (391)
T 1l0q_A 75 -SPQGVAVSPDGKQVYVTNMAS-----STLSVIDTTSN--TVAGTVKTG-----KSPLGLALSPDGKKLYVTNNGD---- 137 (391)
T ss_dssp -SEEEEEECTTSSEEEEEETTT-----TEEEEEETTTT--EEEEEEECS-----SSEEEEEECTTSSEEEEEETTT----
T ss_pred -CccceEECCCCCEEEEEECCC-----CEEEEEECCCC--eEEEEEeCC-----CCcceEEECCCCCEEEEEeCCC----
Confidence 22233333 344566665433 45899999887 332221111 112334444555 465665432
Q ss_pred cccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe--CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEe
Q 004198 231 PLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV--GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLD 302 (769)
Q Consensus 231 ~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~--~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~ 302 (769)
+.++.++..+. +..+....+. .-..+++. +..+|+.++. ...+.+||+.+.+...
T Consensus 138 --~~v~~~d~~~~-~~~~~~~~~~-----~~~~~~~~~dg~~l~~~~~~---------~~~v~~~d~~~~~~~~ 194 (391)
T 1l0q_A 138 --KTVSVINTVTK-AVINTVSVGR-----SPKGIAVTPDGTKVYVANFD---------SMSISVIDTVTNSVID 194 (391)
T ss_dssp --TEEEEEETTTT-EEEEEEECCS-----SEEEEEECTTSSEEEEEETT---------TTEEEEEETTTTEEEE
T ss_pred --CEEEEEECCCC-cEEEEEecCC-----CcceEEECCCCCEEEEEeCC---------CCEEEEEECCCCeEEE
Confidence 35777777643 2222222121 11333343 4467676552 2458999998875443
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=93.52 E-value=2.6 Score=45.60 Aligned_cols=190 Identities=11% Similarity=0.124 Sum_probs=100.6
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE---CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV---GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPG 151 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~---~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~ 151 (769)
..++.+|+.+++...+.... . . ..+..+ +..|++.+..+ ....+|++|+.+. +..++. ..+
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~---~--~-~~~~~~spdg~~la~~~~~~----g~~~i~~~d~~~~--~~~~l~---~~~- 266 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFP---R--H-NGAPAFSPDGSKLAFALSKT----GSLNLYVMDLASG--QIRQVT---DGR- 266 (415)
T ss_dssp CEEEEEETTTCCEEEEECCS---S--C-EEEEEECTTSSEEEEEECTT----SSCEEEEEETTTC--CEEECC---CCS-
T ss_pred cEEEEEECCCCcEEEeecCC---C--c-ccCEEEcCCCCEEEEEEecC----CCceEEEEECCCC--CEEeCc---CCC-
Confidence 57999999999887765431 1 1 112222 34566554431 1346999999883 455542 111
Q ss_pred CccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCc
Q 004198 152 PRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAP 231 (769)
Q Consensus 152 ~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~ 231 (769)
..-.......++..+++++.... ...+|.+|+.+. +-..+... .....+.....++..+++++....
T Consensus 267 -~~~~~~~~spdg~~l~~~s~~~g--~~~i~~~d~~~~--~~~~l~~~-----~~~~~~~~~spdG~~l~~~~~~~g--- 333 (415)
T 2hqs_A 267 -SNNTEPTWFPDSQNLAFTSDQAG--RPQVYKVNINGG--APQRITWE-----GSQNQDADVSSDGKFMVMVSSNGG--- 333 (415)
T ss_dssp -SCEEEEEECTTSSEEEEEECTTS--SCEEEEEETTSS--CCEECCCS-----SSEEEEEEECTTSSEEEEEEECSS---
T ss_pred -CcccceEECCCCCEEEEEECCCC--CcEEEEEECCCC--CEEEEecC-----CCcccCeEECCCCCEEEEEECcCC---
Confidence 11122323333344444443221 246899999876 33333221 122223444577776666654321
Q ss_pred ccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccCC
Q 004198 232 LADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGL 306 (769)
Q Consensus 232 l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~ 306 (769)
...++.++..+. +...+... . .-.+.++. +++.+++++...+ ...++++|+.+...+.+...
T Consensus 334 ~~~i~~~d~~~~---~~~~l~~~---~-~~~~~~~spdg~~l~~~s~~~~------~~~l~~~d~~g~~~~~l~~~ 396 (415)
T 2hqs_A 334 QQHIAKQDLATG---GVQVLSST---F-LDETPSLAPNGTMVIYSSSQGM------GSVLNLVSTDGRFKARLPAT 396 (415)
T ss_dssp CEEEEEEETTTC---CEEECCCS---S-SCEEEEECTTSSEEEEEEEETT------EEEEEEEETTSCCEEECCCS
T ss_pred ceEEEEEECCCC---CEEEecCC---C-CcCCeEEcCCCCEEEEEEcCCC------ccEEEEEECCCCcEEEeeCC
Confidence 356788888754 33333322 1 22233333 6666677664321 23699999988877776543
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=93.43 E-value=13 Score=42.14 Aligned_cols=121 Identities=15% Similarity=0.179 Sum_probs=67.5
Q ss_pred CcEEEEECCCCc--EEEecCCCCCCcc-cccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCC---
Q 004198 75 NSVHLYDVLTRK--WTRIRPAGEPPSP-RAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQ--- 148 (769)
Q Consensus 75 ~dv~~yD~~~~~--W~~l~~~g~~P~~-R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~--- 148 (769)
..++++|..+++ |+.-... .+.. ....+-+..++.||+..+.... .....++.||..+.+..|+.-.....
T Consensus 125 g~l~alD~~tG~~~W~~~~~~--~~~~~~~~~~P~v~~g~v~vg~~~~~~-~~~g~v~a~D~~tG~~~W~~~~~~~~~~~ 201 (571)
T 2ad6_A 125 GHLLALDAKTGKINWEVEVCD--PKVGSTLTQAPFVAKDTVLMGCSGAEL-GVRGAVNAFDLKTGELKWRAFATGSDDSV 201 (571)
T ss_dssp SEEEEEETTTCCEEEEEECCC--GGGTCBCCSCCEEETTEEEEECBCGGG-TCCCEEEEEETTTCCEEEEEESSSCHHHH
T ss_pred CEEEEEECCCCCEEEEecCCC--CCccceeccCCEEECCEEEEEecCCcc-CCCCEEEEEECCCCcEEEEEccCCCcccc
Confidence 579999998875 8854321 1110 1122334568888886542111 12356999999998788976532110
Q ss_pred --CCCC--------------------cc---c----cEEEEE-CCcEEEEEecCC----------CCCccCceeEEeCCC
Q 004198 149 --GPGP--------------------RY---G----HVMDLV-SQRYLVSVSGND----------GKRVLSDAWALDTAQ 188 (769)
Q Consensus 149 --~p~~--------------------R~---~----hs~~~~-~~~~l~v~GG~~----------~~~~~~dv~~~d~~~ 188 (769)
.|.. .+ + ..+++. ..+.+|+..|+. +..+.+.++++|+++
T Consensus 202 ~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~t 281 (571)
T 2ad6_A 202 RLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDT 281 (571)
T ss_dssp TBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTT
T ss_pred ccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCC
Confidence 0100 00 0 112222 334777765542 122345799999999
Q ss_pred CCceEEEcCC
Q 004198 189 KPYVWQRLNP 198 (769)
Q Consensus 189 ~~~~W~~v~~ 198 (769)
....|+.-..
T Consensus 282 G~~~W~~~~~ 291 (571)
T 2ad6_A 282 GMAKWGYQKT 291 (571)
T ss_dssp CCEEEEEESS
T ss_pred CcEEEEecCC
Confidence 9889987543
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=93.15 E-value=16 Score=42.35 Aligned_cols=122 Identities=21% Similarity=0.290 Sum_probs=68.9
Q ss_pred CcEEEEECCCCc--EEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCC--C
Q 004198 75 NSVHLYDVLTRK--WTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQG--P 150 (769)
Q Consensus 75 ~dv~~yD~~~~~--W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~--p 150 (769)
+.++.+|..+++ |+.-.............+-+..++.||+..+... ......++.||..+.+..|..-...... +
T Consensus 138 g~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~-~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~ 216 (677)
T 1kb0_A 138 GRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAE-YGVRGYITAYDAETGERKWRWFSVPGDPSKP 216 (677)
T ss_dssp SEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTT-TCCBCEEEEEETTTCCEEEEEESSCCCTTSC
T ss_pred CEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccc-cCCCCEEEEEECCCCcEEEEeccCCCCcccc
Confidence 579999998876 8865321101111122234456788887654322 1134679999999988889875321111 0
Q ss_pred ----------------CCcc---c-----cEEEEE-CCcEEEEEecCC-------------CCCccCceeEEeCCCCCce
Q 004198 151 ----------------GPRY---G-----HVMDLV-SQRYLVSVSGND-------------GKRVLSDAWALDTAQKPYV 192 (769)
Q Consensus 151 ----------------~~R~---~-----hs~~~~-~~~~l~v~GG~~-------------~~~~~~dv~~~d~~~~~~~ 192 (769)
...+ + ..+++. ..+.+|+..++. ...+...++.+|.++....
T Consensus 217 ~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~ 296 (677)
T 1kb0_A 217 FEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYK 296 (677)
T ss_dssp CSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEE
T ss_pred ccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEE
Confidence 0000 0 122222 345777655432 1224567999999999889
Q ss_pred EEEcC
Q 004198 193 WQRLN 197 (769)
Q Consensus 193 W~~v~ 197 (769)
|..-.
T Consensus 297 W~~~~ 301 (677)
T 1kb0_A 297 WHYQE 301 (677)
T ss_dssp EEEES
T ss_pred EEEec
Confidence 98653
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=93.12 E-value=8.7 Score=39.30 Aligned_cols=190 Identities=14% Similarity=0.069 Sum_probs=95.1
Q ss_pred CCcEEEEECCCCcEEEecCCCCCCcccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCC
Q 004198 74 TNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPG 151 (769)
Q Consensus 74 ~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~ 151 (769)
.+.++++|+.+.+....-..+.. .++++.. ++.+|+.++. .+.++++|+.+.+..+ .+.. +....
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~~~-----~~~~~~s~dg~~l~v~~~~------~~~v~~~d~~~~~~~~-~~~~-~~~~~ 134 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHNDLK-----PFGATINNTTQTLWFGNTV------NSAVTAIDAKTGEVKG-RLVL-DDRKR 134 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEESSC-----CCSEEEETTTTEEEEEETT------TTEEEEEETTTCCEEE-EEES-CCCCC
T ss_pred CccEEEEcCCCCeEEEEEecCCC-----cceEEECCCCCEEEEEecC------CCEEEEEeCCCCeeEE-EEec-CCCcc
Confidence 46799999998875443322211 2333333 3468887653 2469999998854323 2322 11111
Q ss_pred -----CccccEEEEE-CCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCC-EEEEEcc
Q 004198 152 -----PRYGHVMDLV-SQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDG-MFLLCGG 224 (769)
Q Consensus 152 -----~R~~hs~~~~-~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g-~l~v~GG 224 (769)
+..-+.+++. .++.+|+.+... -..++++|+.+....+.. ...+.. -+......++ .+|+...
T Consensus 135 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~----~~~i~~~d~~~~~~~~~~-~~~~~~-----~~~~~~s~dg~~l~~~~~ 204 (353)
T 3vgz_A 135 TEEVRPLQPRELVADDATNTVYISGIGK----ESVIWVVDGGNIKLKTAI-QNTGKM-----STGLALDSEGKRLYTTNA 204 (353)
T ss_dssp CSSCCCCEEEEEEEETTTTEEEEEEESS----SCEEEEEETTTTEEEEEE-CCCCTT-----CCCCEEETTTTEEEEECT
T ss_pred ccccCCCCCceEEECCCCCEEEEEecCC----CceEEEEcCCCCceEEEe-cCCCCc-----cceEEECCCCCEEEEEcC
Confidence 1112334343 345677765322 245999999887333222 211111 1233334454 5666532
Q ss_pred cCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe--CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEe
Q 004198 225 RDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV--GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLD 302 (769)
Q Consensus 225 ~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~--~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~ 302 (769)
-+.++.+|..+. .-.+....+.........++++. ++.+|+.... .+.+++||+.+.+...
T Consensus 205 -------~~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~---------~~~v~~~d~~~~~~~~ 267 (353)
T 3vgz_A 205 -------DGELITIDTADN-KILSRKKLLDDGKEHFFINISLDTARQRAFITDSK---------AAEVLVVDTRNGNILA 267 (353)
T ss_dssp -------TSEEEEEETTTT-EEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS---------SSEEEEEETTTCCEEE
T ss_pred -------CCeEEEEECCCC-eEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC---------CCEEEEEECCCCcEEE
Confidence 246777887644 22222222111111222234443 5567766431 3569999998876544
Q ss_pred c
Q 004198 303 R 303 (769)
Q Consensus 303 ~ 303 (769)
.
T Consensus 268 ~ 268 (353)
T 3vgz_A 268 K 268 (353)
T ss_dssp E
T ss_pred E
Confidence 3
|
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
|---|
Probab=93.12 E-value=0.1 Score=57.44 Aligned_cols=69 Identities=16% Similarity=0.152 Sum_probs=39.4
Q ss_pred EEEEccCCCCHHHHHHHHHHhC-CCCCCCCCcceeEEEeccccCCCCC-----h-HH-HHHHHHHhhhcCCCceEEecCC
Q 004198 583 VKVFGDLHGQFGDLMRLFDEYG-FPSTAGDITYIDYLFLGDYVDRGQH-----S-LE-TITLLLALKIEYPENVHLIRGN 654 (769)
Q Consensus 583 i~viGDiHG~~~~l~~~l~~~~-~~~~~~~~~~~~~vfLGD~vDrG~~-----s-~e-~l~ll~~lk~~~p~~v~llrGN 654 (769)
+.++||+|..... .+.++.+. .+..- + -+|++||+++.+.. . .+ ...++..+.... .++.+.||
T Consensus 129 f~~~gD~~~~~~~-~~~l~~i~~~~~~~-D----~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l~~~~--P~~~v~GN 200 (426)
T 1xzw_A 129 FGLIGDIGQTHDS-NTTLTHYEQNSAKG-Q----AVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQ--PWIWTAGN 200 (426)
T ss_dssp EEEECSCTTBHHH-HHHHHHHHHCTTCC-S----EEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTS--CEECCCCG
T ss_pred EEEEEeCCCCCch-HHHHHHHHhCCCCC-C----EEEeCCChhhcccCCcccchHHHHHHHHHHHHHhcC--CEEEeccc
Confidence 8899999987532 22333322 11111 1 57889999975321 1 11 233444443333 58999999
Q ss_pred cchhh
Q 004198 655 HEAAD 659 (769)
Q Consensus 655 HE~~~ 659 (769)
||...
T Consensus 201 HD~~~ 205 (426)
T 1xzw_A 201 HEIDY 205 (426)
T ss_dssp GGCCC
T ss_pred ccccc
Confidence 99764
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=93.07 E-value=8.8 Score=39.24 Aligned_cols=187 Identities=16% Similarity=0.110 Sum_probs=91.6
Q ss_pred CcEEEEECCCCcEEEecCCCCCCc-----ccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPS-----PRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQG 147 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~-----~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g 147 (769)
+.++++|+.+++-...-..+.... +..-++++.. ++.+|+.+... ...++++|+.+.+.. ..+...+
T Consensus 111 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~~i~~~d~~~~~~~-~~~~~~~ 184 (353)
T 3vgz_A 111 SAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK-----ESVIWVVDGGNIKLK-TAIQNTG 184 (353)
T ss_dssp TEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS-----SCEEEEEETTTTEEE-EEECCCC
T ss_pred CEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC-----CceEEEEcCCCCceE-EEecCCC
Confidence 579999999887432222211111 1112333332 45788776321 245999999884322 2221111
Q ss_pred CCCCCccccEEEEE-CCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCC-EEEEEccc
Q 004198 148 QGPGPRYGHVMDLV-SQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDG-MFLLCGGR 225 (769)
Q Consensus 148 ~~p~~R~~hs~~~~-~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g-~l~v~GG~ 225 (769)
. .-+.++.. +++.+|+... -+.++++|+.+....+.... ....+ ...........++ .+|+.+..
T Consensus 185 ~-----~~~~~~~s~dg~~l~~~~~------~~~i~~~d~~~~~~~~~~~~-~~~~~-~~~~~~~~~s~dg~~l~~~~~~ 251 (353)
T 3vgz_A 185 K-----MSTGLALDSEGKRLYTTNA------DGELITIDTADNKILSRKKL-LDDGK-EHFFINISLDTARQRAFITDSK 251 (353)
T ss_dssp T-----TCCCCEEETTTTEEEEECT------TSEEEEEETTTTEEEEEEEC-CCSSS-CCCEEEEEEETTTTEEEEEESS
T ss_pred C-----ccceEEECCCCCEEEEEcC------CCeEEEEECCCCeEEEEEEc-CCCCC-CcccceEEECCCCCEEEEEeCC
Confidence 1 11223333 4446666543 24688999988743333222 11111 1112223344454 56665421
Q ss_pred CCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe--CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEe
Q 004198 226 DASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV--GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLD 302 (769)
Q Consensus 226 ~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~--~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~ 302 (769)
.+.++.+|..+...-..... + .+ ...++. ++.+|+.+.. .+.+.+||+.+.+...
T Consensus 252 ------~~~v~~~d~~~~~~~~~~~~-~---~~---~~~~~s~dg~~l~v~~~~---------~~~v~~~d~~~~~~~~ 308 (353)
T 3vgz_A 252 ------AAEVLVVDTRNGNILAKVAA-P---ES---LAVLFNPARNEAYVTHRQ---------AGKVSVIDAKSYKVVK 308 (353)
T ss_dssp ------SSEEEEEETTTCCEEEEEEC-S---SC---CCEEEETTTTEEEEEETT---------TTEEEEEETTTTEEEE
T ss_pred ------CCEEEEEECCCCcEEEEEEc-C---CC---ceEEECCCCCEEEEEECC---------CCeEEEEECCCCeEEE
Confidence 25678888764422222222 1 11 223333 4567776542 2469999998876544
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=93.06 E-value=4.1 Score=41.32 Aligned_cols=179 Identities=15% Similarity=0.147 Sum_probs=87.3
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
+.+..||+.+.+........ ..........+ ++..++.|+. ...+.+||+.+. +..... ... .
T Consensus 119 ~~i~~~d~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~------dg~v~~~d~~~~--~~~~~~---~~~-~ 183 (337)
T 1gxr_A 119 STLSIWDLAAPTPRIKAELT---SSAPACYALAISPDSKVCFSCCS------DGNIAVWDLHNQ--TLVRQF---QGH-T 183 (337)
T ss_dssp SEEEEEECCCC--EEEEEEE---CSSSCEEEEEECTTSSEEEEEET------TSCEEEEETTTT--EEEEEE---CCC-S
T ss_pred CcEEEEECCCCCcceeeecc---cCCCceEEEEECCCCCEEEEEeC------CCcEEEEeCCCC--ceeeee---ecc-c
Confidence 57889999888754433211 00111112222 3445555553 234899999883 333321 111 1
Q ss_pred ccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcc
Q 004198 153 RYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPL 232 (769)
Q Consensus 153 R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l 232 (769)
..-.++....++.+++.|+.++ .+.+||+.+. +-...... .....+.....++.+++.|+.+
T Consensus 184 ~~i~~~~~~~~~~~l~~~~~dg-----~i~~~d~~~~--~~~~~~~~-----~~~v~~~~~s~~~~~l~~~~~~------ 245 (337)
T 1gxr_A 184 DGASCIDISNDGTKLWTGGLDN-----TVRSWDLREG--RQLQQHDF-----TSQIFSLGYCPTGEWLAVGMES------ 245 (337)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----EEEEEETTTT--EEEEEEEC-----SSCEEEEEECTTSSEEEEEETT------
T ss_pred CceEEEEECCCCCEEEEEecCC-----cEEEEECCCC--ceEeeecC-----CCceEEEEECCCCCEEEEEcCC------
Confidence 1122333333445666666543 5888998876 22111111 1112334445677777777643
Q ss_pred cceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCcEE
Q 004198 233 ADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWL 301 (769)
Q Consensus 233 ~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~ 301 (769)
..+..++........ ... ....-.++++. ++.+++.|+. ...+.+||..+.+-.
T Consensus 246 ~~i~~~~~~~~~~~~---~~~---~~~~v~~~~~~~~~~~l~~~~~---------dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 246 SNVEVLHVNKPDKYQ---LHL---HESCVLSLKFAYCGKWFVSTGK---------DNLLNAWRTPYGASI 300 (337)
T ss_dssp SCEEEEETTSSCEEE---ECC---CSSCEEEEEECTTSSEEEEEET---------TSEEEEEETTTCCEE
T ss_pred CcEEEEECCCCCeEE---EcC---CccceeEEEECCCCCEEEEecC---------CCcEEEEECCCCeEE
Confidence 246667766542221 111 11111223333 5666777763 235899998877644
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=92.83 E-value=3.3 Score=44.21 Aligned_cols=192 Identities=7% Similarity=-0.076 Sum_probs=93.4
Q ss_pred cEEEEECCCCcEEEecCCCCCCcccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCcc
Q 004198 76 SVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRY 154 (769)
Q Consensus 76 dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~ 154 (769)
.+|.+|+.+.+++.+.... ......+++.. ++.+++.++.+ ..++++|+.+. +.......+.......
T Consensus 102 ~l~~~d~~~~~~~~~~~~~---~~~~~~~~~~s~~~~~~~~~~~~------~~i~~~d~~~g--~~~~~~~~~~~~~~~~ 170 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFK---TGFQPKSVRFIDNTRLAIPLLED------EGMDVLDINSG--QTVRLSPPEKYKKKLG 170 (433)
T ss_dssp CEEECCBTTCSEEEEEEEE---CSSCBCCCEESSSSEEEEEBTTS------SSEEEEETTTC--CEEEECCCHHHHTTCC
T ss_pred EEEEECCCCCcceEEEEEc---CCCCceEEEEeCCCeEEEEeCCC------CeEEEEECCCC--eEeeecCcccccccCC
Confidence 7899999877666554321 11111222222 67888877642 34999999884 3443311001111111
Q ss_pred c-cEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCC-EEEEEcccCCCCCcc
Q 004198 155 G-HVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDG-MFLLCGGRDASGAPL 232 (769)
Q Consensus 155 ~-hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g-~l~v~GG~~~~~~~l 232 (769)
. .+++...++.+++.|+.+ ..+.+||+.+....+... .. ...-.+.....++ .+|+.++.+
T Consensus 171 ~v~~~~~~~~~~~~~s~~~d-----~~v~~~d~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~l~~~~~~~------ 233 (433)
T 3bws_A 171 FVETISIPEHNELWVSQMQA-----NAVHVFDLKTLAYKATVD-LT-----GKWSKILLYDPIRDLVYCSNWIS------ 233 (433)
T ss_dssp EEEEEEEGGGTEEEEEEGGG-----TEEEEEETTTCCEEEEEE-CS-----SSSEEEEEEETTTTEEEEEETTT------
T ss_pred ceeEEEEcCCCEEEEEECCC-----CEEEEEECCCceEEEEEc-CC-----CCCeeEEEEcCCCCEEEEEecCC------
Confidence 1 123233455777777644 358899988763333222 11 1111233334444 566665432
Q ss_pred cceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEe
Q 004198 233 ADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLD 302 (769)
Q Consensus 233 ~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~ 302 (769)
..++.+|..+. ...+... . ...-+++++. +++.+++++...+.. ......+.+||+.+.+-..
T Consensus 234 ~~i~~~d~~~~-~~~~~~~-~----~~~~~~~~~~~~g~~l~~~~~~~~~~-~~~dg~i~~~d~~~~~~~~ 297 (433)
T 3bws_A 234 EDISVIDRKTK-LEIRKTD-K----IGLPRGLLLSKDGKELYIAQFSASNQ-ESGGGRLGIYSMDKEKLID 297 (433)
T ss_dssp TEEEEEETTTT-EEEEECC-C----CSEEEEEEECTTSSEEEEEEEESCTT-CSCCEEEEEEETTTTEEEE
T ss_pred CcEEEEECCCC-cEEEEec-C----CCCceEEEEcCCCCEEEEEECCCCcc-ccCCCeEEEEECCCCcEEe
Confidence 35777887643 2222211 1 1112333333 454444444322111 1123579999998775443
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=92.48 E-value=2.6 Score=43.20 Aligned_cols=65 Identities=17% Similarity=0.196 Sum_probs=39.0
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccccceEEEE--CCEEEEECccCCCC
Q 004198 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAG 122 (769)
Q Consensus 45 ~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~ 122 (769)
++++|+.++. .+.++++|+.+++....-..+. ....+.++.. ++.+|+.+..
T Consensus 10 ~~~~~v~~~~-------------------~~~v~~~d~~~~~~~~~~~~~~---~~~~~~~~~s~dg~~~~v~~~~---- 63 (349)
T 1jmx_B 10 GHEYMIVTNY-------------------PNNLHVVDVASDTVYKSCVMPD---KFGPGTAMMAPDNRTAYVLNNH---- 63 (349)
T ss_dssp TCEEEEEEET-------------------TTEEEEEETTTTEEEEEEECSS---CCSSCEEEECTTSSEEEEEETT----
T ss_pred CCEEEEEeCC-------------------CCeEEEEECCCCcEEEEEecCC---CCCCceeEECCCCCEEEEEeCC----
Confidence 6678887763 3579999999887654332221 0012333332 3467777632
Q ss_pred CCcCcEEEEEccCCc
Q 004198 123 HSTDDLYVLDLTNDK 137 (769)
Q Consensus 123 ~~~~dl~~~d~~t~~ 137 (769)
...++++|+.+.+
T Consensus 64 --~~~i~~~d~~t~~ 76 (349)
T 1jmx_B 64 --YGDIYGIDLDTCK 76 (349)
T ss_dssp --TTEEEEEETTTTE
T ss_pred --CCcEEEEeCCCCc
Confidence 2569999998843
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=92.46 E-value=8.3 Score=39.72 Aligned_cols=97 Identities=9% Similarity=0.158 Sum_probs=49.5
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--C--CEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--G--TMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGP 150 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~--~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p 150 (769)
+.+.+||+....+..+.... .....-.++.. . +.+++.|+.+ ..+.+||+.+ .+|..+......
T Consensus 33 g~i~iw~~~~~~~~~~~~~~---~h~~~v~~~~~~~~~~~~~l~s~~~d------g~v~iwd~~~--~~~~~~~~~~~~- 100 (379)
T 3jrp_A 33 KTIKIFEVEGETHKLIDTLT---GHEGPVWRVDWAHPKFGTILASCSYD------GKVLIWKEEN--GRWSQIAVHAVH- 100 (379)
T ss_dssp SCEEEEEEETTEEEEEEEEC---CCSSCEEEEEECCGGGCSEEEEEETT------SCEEEEEEET--TEEEEEEEECCC-
T ss_pred CcEEEEecCCCcceeeeEec---CCCCcEEEEEeCCCCCCCEEEEeccC------CEEEEEEcCC--CceeEeeeecCC-
Confidence 46888888877776554321 01111122222 1 4555555542 3489999988 556655431111
Q ss_pred CCccccEEEEECC--cEEEEEecCCCCCccCceeEEeCCCC
Q 004198 151 GPRYGHVMDLVSQ--RYLVSVSGNDGKRVLSDAWALDTAQK 189 (769)
Q Consensus 151 ~~R~~hs~~~~~~--~~l~v~GG~~~~~~~~dv~~~d~~~~ 189 (769)
...-.++....+ +.+++.|+.++ .+.+||+.+.
T Consensus 101 -~~~v~~~~~~~~~~~~~l~~~~~d~-----~i~v~d~~~~ 135 (379)
T 3jrp_A 101 -SASVNSVQWAPHEYGPLLLVASSDG-----KVSVVEFKEN 135 (379)
T ss_dssp -SSCEEEEEECCGGGCSEEEEEETTS-----EEEEEECCTT
T ss_pred -CcceEEEEeCCCCCCCEEEEecCCC-----cEEEEecCCC
Confidence 111122222232 35666676554 4777777654
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=92.42 E-value=12 Score=39.08 Aligned_cols=177 Identities=18% Similarity=0.122 Sum_probs=88.5
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
+.++++|+.+++....-..+. .-.+++.. ++.||+.|.. ...+++||+.+. +.......+
T Consensus 54 ~~i~v~d~~~~~~~~~~~~~~-----~v~~~~~spdg~~l~~~~~~------~~~v~v~d~~~~--~~~~~~~~~----- 115 (391)
T 1l0q_A 54 NDVSIIDTATNNVIATVPAGS-----SPQGVAVSPDGKQVYVTNMA------SSTLSVIDTTSN--TVAGTVKTG----- 115 (391)
T ss_dssp TEEEEEETTTTEEEEEEECSS-----SEEEEEECTTSSEEEEEETT------TTEEEEEETTTT--EEEEEEECS-----
T ss_pred CeEEEEECCCCeEEEEEECCC-----CccceEECCCCCEEEEEECC------CCEEEEEECCCC--eEEEEEeCC-----
Confidence 579999999887654433221 11222222 3467776542 245999999984 333332111
Q ss_pred ccccEEEEE-CCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCC-EEEEEcccCCCCC
Q 004198 153 RYGHVMDLV-SQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDG-MFLLCGGRDASGA 230 (769)
Q Consensus 153 R~~hs~~~~-~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g-~l~v~GG~~~~~~ 230 (769)
..-..++.. .++.+|+.++.+ +.++++|+.+. +....-..+. .-.......++ .+|+.++.+
T Consensus 116 ~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~--~~~~~~~~~~-----~~~~~~~~~dg~~l~~~~~~~---- 179 (391)
T 1l0q_A 116 KSPLGLALSPDGKKLYVTNNGD-----KTVSVINTVTK--AVINTVSVGR-----SPKGIAVTPDGTKVYVANFDS---- 179 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTT-----TEEEEEETTTT--EEEEEEECCS-----SEEEEEECTTSSEEEEEETTT----
T ss_pred CCcceEEECCCCCEEEEEeCCC-----CEEEEEECCCC--cEEEEEecCC-----CcceEEECCCCCEEEEEeCCC----
Confidence 112333333 344676766543 36899999887 4333222211 11333444555 566665432
Q ss_pred cccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CC-EEEEEecccCCCCcccCCCcEEEEECCCCcE
Q 004198 231 PLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GA-RLHVTGGALRGGRAIEGEAAVAVLDTAAGVW 300 (769)
Q Consensus 231 ~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~-~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W 300 (769)
+.++.+|..+. +....... ...-.++++. ++ .+++.+. .. ....+.+||+.+.+-
T Consensus 180 --~~v~~~d~~~~---~~~~~~~~---~~~~~~~~~~~~g~~l~~~~~-~~------~~~~v~~~d~~~~~~ 236 (391)
T 1l0q_A 180 --MSISVIDTVTN---SVIDTVKV---EAAPSGIAVNPEGTKAYVTNV-DK------YFNTVSMIDTGTNKI 236 (391)
T ss_dssp --TEEEEEETTTT---EEEEEEEC---SSEEEEEEECTTSSEEEEEEE-CS------SCCEEEEEETTTTEE
T ss_pred --CEEEEEECCCC---eEEEEEec---CCCccceEECCCCCEEEEEec-Cc------CCCcEEEEECCCCeE
Confidence 34777777644 22111111 1111233333 34 4544432 11 134699999987753
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=92.33 E-value=11 Score=38.66 Aligned_cols=194 Identities=10% Similarity=0.032 Sum_probs=88.0
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
+.+..||+.+.++........ . ...-.++.+ ++..++.|+. ...+.+||+.+....+..... ..+..
T Consensus 74 g~i~vwd~~~~~~~~~~~~~~--~-~~~v~~~~~~~~~~~l~~~~~------d~~v~i~d~~~~~~~~~~~~~--~~~~~ 142 (372)
T 1k8k_C 74 RNAYVWTLKGRTWKPTLVILR--I-NRAARCVRWAPNEKKFAVGSG------SRVISICYFEQENDWWVCKHI--KKPIR 142 (372)
T ss_dssp SCEEEEEEETTEEEEEEECCC--C-SSCEEEEEECTTSSEEEEEET------TSSEEEEEEETTTTEEEEEEE--CTTCC
T ss_pred CeEEEEECCCCeeeeeEEeec--C-CCceeEEEECCCCCEEEEEeC------CCEEEEEEecCCCcceeeeee--ecccC
Confidence 468889998888765532210 1 111122222 3445555553 234778887764322222211 11111
Q ss_pred ccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCC-------ceE-------EEcCCCCCCCCcccccEEEEecCCE
Q 004198 153 RYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKP-------YVW-------QRLNPEGDRPSARMYATASARSDGM 218 (769)
Q Consensus 153 R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~-------~~W-------~~v~~~~~~P~~r~~hsa~~~~~g~ 218 (769)
..-.++....+..+++.|+.++ .+.+||+.... ..| ..+.... .......+.....++.
T Consensus 143 ~~i~~~~~~~~~~~l~~~~~dg-----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~ 215 (372)
T 1k8k_C 143 STVLSLDWHPNSVLLAAGSCDF-----KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS--SSCGWVHGVCFSANGS 215 (372)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC--CCSSCEEEEEECSSSS
T ss_pred CCeeEEEEcCCCCEEEEEcCCC-----CEEEEEcccccccccccccccccccchhhheEecC--CCCCeEEEEEECCCCC
Confidence 2222333344446677777554 46777753110 000 0000000 0111122333446676
Q ss_pred EEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEE-eCCEEEEEecccCCCCcccCCCcEEEEECCC
Q 004198 219 FLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVF-VGARLHVTGGALRGGRAIEGEAAVAVLDTAA 297 (769)
Q Consensus 219 l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~-~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t 297 (769)
+++.|+.+ ..+..|+..+...-...... .... .++++ -++.+++.| .. ..+.+|+..+
T Consensus 216 ~l~~~~~d------~~i~i~d~~~~~~~~~~~~~----~~~v-~~~~~~~~~~~l~~~-~d---------~~i~i~~~~~ 274 (372)
T 1k8k_C 216 RVAWVSHD------STVCLADADKKMAVATLASE----TLPL-LAVTFITESSLVAAG-HD---------CFPVLFTYDS 274 (372)
T ss_dssp EEEEEETT------TEEEEEEGGGTTEEEEEECS----SCCE-EEEEEEETTEEEEEE-TT---------SSCEEEEEET
T ss_pred EEEEEeCC------CEEEEEECCCCceeEEEccC----CCCe-EEEEEecCCCEEEEE-eC---------CeEEEEEccC
Confidence 77777643 23556666533211111111 1111 22333 367766655 22 2367777777
Q ss_pred --CcEEeccCCc
Q 004198 298 --GVWLDRNGLV 307 (769)
Q Consensus 298 --~~W~~~~~~~ 307 (769)
++|..+....
T Consensus 275 ~~~~~~~~~~~~ 286 (372)
T 1k8k_C 275 AAGKLSFGGRLD 286 (372)
T ss_dssp TTTEEEECCCCC
T ss_pred cCceEEEeeccC
Confidence 8998876654
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=92.26 E-value=8.4 Score=38.96 Aligned_cols=155 Identities=10% Similarity=0.068 Sum_probs=85.6
Q ss_pred CEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCC
Q 004198 110 TMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQK 189 (769)
Q Consensus 110 ~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~ 189 (769)
+.+++.|.. ...++++|.++.+..|+.-.. .....|.+.+..++.+++.+ -+.++.||+ +.
T Consensus 5 ~~~lv~~~~------~~~v~~~d~~tG~~~w~~~~~-----~~~~~~~~~~~pdG~ilvs~-------~~~V~~~d~-~G 65 (276)
T 3no2_A 5 QHLLVGGSG------WNKIAIINKDTKEIVWEYPLE-----KGWECNSVAATKAGEILFSY-------SKGAKMITR-DG 65 (276)
T ss_dssp CEEEEECTT------CSEEEEEETTTTEEEEEEECC-----TTCCCCEEEECTTSCEEEEC-------BSEEEEECT-TS
T ss_pred CcEEEeeCC------CCEEEEEECCCCeEEEEeCCC-----ccCCCcCeEECCCCCEEEeC-------CCCEEEECC-CC
Confidence 466666643 366999999887777876521 11123455566566777732 245999999 66
Q ss_pred CceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCC-CCCcccceEEEEeC
Q 004198 190 PYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGV-APSPRYQHAAVFVG 268 (769)
Q Consensus 190 ~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~-~P~~R~~hs~~~~~ 268 (769)
...|+.-... ....+++....+|.+++..... ...++.++..-...|++...... .+...........+
T Consensus 66 ~~~W~~~~~~-----~~~~~~~~~~~dG~~lv~~~~~-----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~ 135 (276)
T 3no2_A 66 RELWNIAAPA-----GCEMQTARILPDGNALVAWCGH-----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKK 135 (276)
T ss_dssp CEEEEEECCT-----TCEEEEEEECTTSCEEEEEEST-----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTT
T ss_pred CEEEEEcCCC-----CccccccEECCCCCEEEEecCC-----CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCC
Confidence 6788765421 1223556666788777764321 13566777643334555433221 11111222233345
Q ss_pred CEEEEEecccCCCCcccCCCcEEEEECCCC-cEEe
Q 004198 269 ARLHVTGGALRGGRAIEGEAAVAVLDTAAG-VWLD 302 (769)
Q Consensus 269 ~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~-~W~~ 302 (769)
+.+++.... ...+.+||++.+ .|+.
T Consensus 136 G~~lv~~~~---------~~~v~~~d~~G~~~w~~ 161 (276)
T 3no2_A 136 GNYLVPLFA---------TSEVREIAPNGQLLNSV 161 (276)
T ss_dssp SCEEEEETT---------TTEEEEECTTSCEEEEE
T ss_pred CCEEEEecC---------CCEEEEECCCCCEEEEE
Confidence 666665431 345899999843 3554
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=92.10 E-value=12 Score=38.45 Aligned_cols=133 Identities=15% Similarity=0.199 Sum_probs=63.4
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPR 153 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R 153 (769)
+.+++||+.+.+|+.+....... ..-.+++.. ++..++.|+. ...+.+||+.+ .++...... .....
T Consensus 30 ~~v~i~~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~l~~~~~------dg~i~vwd~~~--~~~~~~~~~--~~~~~ 97 (372)
T 1k8k_C 30 HEVHIYEKSGNKWVQVHELKEHN--GQVTGVDWAPDSNRIVTCGT------DRNAYVWTLKG--RTWKPTLVI--LRINR 97 (372)
T ss_dssp SEEEEEEEETTEEEEEEEEECCS--SCEEEEEEETTTTEEEEEET------TSCEEEEEEET--TEEEEEEEC--CCCSS
T ss_pred CEEEEEeCCCCcEEeeeeecCCC--CcccEEEEeCCCCEEEEEcC------CCeEEEEECCC--CeeeeeEEe--ecCCC
Confidence 57899999998776554331111 111122222 3445555553 23488999988 445544321 11112
Q ss_pred cccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccC
Q 004198 154 YGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRD 226 (769)
Q Consensus 154 ~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~ 226 (769)
.-.++....+..+++.|+.++ .+.+||+.+.. .|....... .+....-.+.....++.+++.|+.+
T Consensus 98 ~v~~~~~~~~~~~l~~~~~d~-----~v~i~d~~~~~-~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~d 163 (372)
T 1k8k_C 98 AARCVRWAPNEKKFAVGSGSR-----VISICYFEQEN-DWWVCKHIK-KPIRSTVLSLDWHPNSVLLAAGSCD 163 (372)
T ss_dssp CEEEEEECTTSSEEEEEETTS-----SEEEEEEETTT-TEEEEEEEC-TTCCSCEEEEEECTTSSEEEEEETT
T ss_pred ceeEEEECCCCCEEEEEeCCC-----EEEEEEecCCC-cceeeeeee-cccCCCeeEEEEcCCCCEEEEEcCC
Confidence 222333334445666676553 35555554442 232221110 0112222334445677777777654
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=91.91 E-value=2.7 Score=48.88 Aligned_cols=19 Identities=11% Similarity=0.069 Sum_probs=15.4
Q ss_pred CCcEEEEECCCCcEEEecC
Q 004198 74 TNSVHLYDVLTRKWTRIRP 92 (769)
Q Consensus 74 ~~dv~~yD~~~~~W~~l~~ 92 (769)
...++.+|+.+++..++..
T Consensus 63 ~~~i~~~d~~~g~~~~~~~ 81 (741)
T 2ecf_A 63 QLDLWSYDIGSGQTRLLVD 81 (741)
T ss_dssp EEEEEEEETTTCCEEEEEC
T ss_pred ccEEEEEECCCCceeEccc
Confidence 3589999999999887754
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=91.67 E-value=4.6 Score=39.78 Aligned_cols=200 Identities=8% Similarity=-0.046 Sum_probs=95.3
Q ss_pred CcEEEEECCC-CcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCc
Q 004198 75 NSVHLYDVLT-RKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPR 153 (769)
Q Consensus 75 ~dv~~yD~~~-~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R 153 (769)
+.++++|+.+ .+...+.... ...........-++..+++++.... ....+|.++..+. +...+.. ...
T Consensus 62 ~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~~~~--~~~~l~~~~~~~~--~~~~~~~----~~~- 130 (297)
T 2ojh_A 62 GLLYRLSLAGDPSPEKVDTGF--ATICNNDHGISPDGALYAISDKVEF--GKSAIYLLPSTGG--TPRLMTK----NLP- 130 (297)
T ss_dssp TEEEEEESSSCCSCEECCCTT--CCCBCSCCEECTTSSEEEEEECTTT--SSCEEEEEETTCC--CCEECCS----SSS-
T ss_pred CeEEEEeCCCCCCceEecccc--ccccccceEECCCCCEEEEEEeCCC--CcceEEEEECCCC--ceEEeec----CCC-
Confidence 4799999999 8877665321 1111112222224444444442111 3467899998773 3334421 111
Q ss_pred cccEEEEE-CCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcc
Q 004198 154 YGHVMDLV-SQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPL 232 (769)
Q Consensus 154 ~~hs~~~~-~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l 232 (769)
...+... +++.+++.++.++. ..+|.++..+. ....+... . ..........++..+++++... ..
T Consensus 131 -~~~~~~spdg~~l~~~~~~~~~---~~l~~~~~~~~--~~~~~~~~----~-~~~~~~~~s~dg~~l~~~~~~~---~~ 196 (297)
T 2ojh_A 131 -SYWHGWSPDGKSFTYCGIRDQV---FDIYSMDIDSG--VETRLTHG----E-GRNDGPDYSPDGRWIYFNSSRT---GQ 196 (297)
T ss_dssp -EEEEEECTTSSEEEEEEEETTE---EEEEEEETTTC--CEEECCCS----S-SCEEEEEECTTSSEEEEEECTT---SS
T ss_pred -ccceEECCCCCEEEEEECCCCc---eEEEEEECCCC--cceEcccC----C-CccccceECCCCCEEEEEecCC---CC
Confidence 2223233 34455545544432 36888888766 55555432 1 1112334446665544443211 13
Q ss_pred cceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcc--cCCCcEEEEECCCCcEEeccC
Q 004198 233 ADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAI--EGEAAVAVLDTAAGVWLDRNG 305 (769)
Q Consensus 233 ~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~--~~~~~v~~yd~~t~~W~~~~~ 305 (769)
..+|.++.... ........ .......++. +++.+++++........ .....++++|..+++...+..
T Consensus 197 ~~i~~~~~~~~---~~~~~~~~---~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 266 (297)
T 2ojh_A 197 MQIWRVRVDGS---SVERITDS---AYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFD 266 (297)
T ss_dssp CEEEEEETTSS---CEEECCCC---SEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEE
T ss_pred ccEEEECCCCC---CcEEEecC---CcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeec
Confidence 56777775543 22333221 1111222222 55555555543221100 012469999999887766554
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=91.66 E-value=8.5 Score=37.76 Aligned_cols=190 Identities=14% Similarity=0.094 Sum_probs=91.9
Q ss_pred CCcEEEEECCCCcEEEecCCCCCCcccccceEEE-ECCEEEEECccCCCCCCcCcEEEEEccC-CcceEEEeeecCCCCC
Q 004198 74 TNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAA-VGTMVVFQGGIGPAGHSTDDLYVLDLTN-DKFKWHRVVVQGQGPG 151 (769)
Q Consensus 74 ~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~-~~~~Iyv~GG~~~~~~~~~dl~~~d~~t-~~~~W~~~~~~g~~p~ 151 (769)
...++.+|+.+++...+.... ..-.+++. -++..+++++ ...++++|+.+ .. ...+. ..+.
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~-----~~v~~~~~spdg~~l~~~~-------~~~i~~~d~~~~~~--~~~~~---~~~~ 83 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTP-----ELFEAPNWSPDGKYLLLNS-------EGLLYRLSLAGDPS--PEKVD---TGFA 83 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEES-----SCCEEEEECTTSSEEEEEE-------TTEEEEEESSSCCS--CEECC---CTTC
T ss_pred ceeEEEEeCCCCceeeeccCC-----cceEeeEECCCCCEEEEEc-------CCeEEEEeCCCCCC--ceEec---cccc
Confidence 568999999998877664321 11112222 2344444443 13699999987 43 33332 1121
Q ss_pred CccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEE-EcccCCCCC
Q 004198 152 PRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLL-CGGRDASGA 230 (769)
Q Consensus 152 ~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v-~GG~~~~~~ 230 (769)
...-..+....++..+++++.... ....+|.++..+. ....+... . . ........++..++ .++.+.
T Consensus 84 ~~~~~~~~~spdg~~l~~~~~~~~-~~~~l~~~~~~~~--~~~~~~~~----~-~-~~~~~~spdg~~l~~~~~~~~--- 151 (297)
T 2ojh_A 84 TICNNDHGISPDGALYAISDKVEF-GKSAIYLLPSTGG--TPRLMTKN----L-P-SYWHGWSPDGKSFTYCGIRDQ--- 151 (297)
T ss_dssp CCBCSCCEECTTSSEEEEEECTTT-SSCEEEEEETTCC--CCEECCSS----S-S-EEEEEECTTSSEEEEEEEETT---
T ss_pred cccccceEECCCCCEEEEEEeCCC-CcceEEEEECCCC--ceEEeecC----C-C-ccceEECCCCCEEEEEECCCC---
Confidence 112222333334445555553322 3467899998776 43444322 1 1 22333445665444 444322
Q ss_pred cccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccC
Q 004198 231 PLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNG 305 (769)
Q Consensus 231 ~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~ 305 (769)
...+|.++.... ........ .... ...+.. +++.+++++... ....+|.++..+.....+..
T Consensus 152 -~~~l~~~~~~~~---~~~~~~~~--~~~~-~~~~~s~dg~~l~~~~~~~------~~~~i~~~~~~~~~~~~~~~ 214 (297)
T 2ojh_A 152 -VFDIYSMDIDSG---VETRLTHG--EGRN-DGPDYSPDGRWIYFNSSRT------GQMQIWRVRVDGSSVERITD 214 (297)
T ss_dssp -EEEEEEEETTTC---CEEECCCS--SSCE-EEEEECTTSSEEEEEECTT------SSCEEEEEETTSSCEEECCC
T ss_pred -ceEEEEEECCCC---cceEcccC--CCcc-ccceECCCCCEEEEEecCC------CCccEEEECCCCCCcEEEec
Confidence 246777776543 22333221 1111 222232 454444443211 13468888887777666543
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=91.61 E-value=15 Score=38.69 Aligned_cols=214 Identities=12% Similarity=0.066 Sum_probs=100.8
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCcc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRY 154 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~ 154 (769)
+.+.+||+.+.+....-.. ....-.++..++.+++.|+. ...+.++|+.+....-..+. + ....
T Consensus 156 g~i~iwd~~~~~~~~~~~~-----~~~~v~~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~--~---~~~~ 219 (401)
T 4aez_A 156 GLVDIYDVESQTKLRTMAG-----HQARVGCLSWNRHVLSSGSR------SGAIHHHDVRIANHQIGTLQ--G---HSSE 219 (401)
T ss_dssp SCEEEEETTTCCEEEEECC-----CSSCEEEEEEETTEEEEEET------TSEEEEEETTSSSCEEEEEE--C---CSSC
T ss_pred CeEEEEECcCCeEEEEecC-----CCCceEEEEECCCEEEEEcC------CCCEEEEecccCcceeeEEc--C---CCCC
Confidence 4688889887764433211 11112223334455555553 24589999985322222221 1 1111
Q ss_pred ccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEec-CCEEEEEcccCCCCCccc
Q 004198 155 GHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARS-DGMFLLCGGRDASGAPLA 233 (769)
Q Consensus 155 ~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~-~g~l~v~GG~~~~~~~l~ 233 (769)
-.++....++.+++.|+.++ .+.+||+.+........ .. ...-.+..... +..+++.||-..+ .
T Consensus 220 v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~~~~~~~~-~~-----~~~v~~~~~~p~~~~ll~~~~gs~d----~ 284 (401)
T 4aez_A 220 VCGLAWRSDGLQLASGGNDN-----VVQIWDARSSIPKFTKT-NH-----NAAVKAVAWCPWQSNLLATGGGTMD----K 284 (401)
T ss_dssp EEEEEECTTSSEEEEEETTS-----CEEEEETTCSSEEEEEC-CC-----SSCCCEEEECTTSTTEEEEECCTTT----C
T ss_pred eeEEEEcCCCCEEEEEeCCC-----eEEEccCCCCCccEEec-CC-----cceEEEEEECCCCCCEEEEecCCCC----C
Confidence 12333333456777777654 58889988763222221 11 11112333334 3356666542111 3
Q ss_pred ceEEEecCCCCceEEEeCCCCCCCcccceEEEEe--CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccCCccCCC
Q 004198 234 DAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV--GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSR 311 (769)
Q Consensus 234 d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~--~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~ 311 (769)
.+..++..+......... . ..-.++++. +..+++.+|.. ...+.+||..+............
T Consensus 285 ~i~i~d~~~~~~~~~~~~-~-----~~v~~~~~s~~~~~l~~~~g~~--------dg~i~v~~~~~~~~~~~~~~~~h-- 348 (401)
T 4aez_A 285 QIHFWNAATGARVNTVDA-G-----SQVTSLIWSPHSKEIMSTHGFP--------DNNLSIWSYSSSGLTKQVDIPAH-- 348 (401)
T ss_dssp EEEEEETTTCCEEEEEEC-S-----SCEEEEEECSSSSEEEEEECTT--------TCEEEEEEEETTEEEEEEEEECC--
T ss_pred EEEEEECCCCCEEEEEeC-C-----CcEEEEEECCCCCeEEEEeecC--------CCcEEEEecCCccceeEEEecCC--
Confidence 466666654321111111 1 011222222 34455554532 23588999888776665443221
Q ss_pred CCCCCCCCCCccCcccccceEEEEeCCEEEEEcCcCCC
Q 004198 312 TSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGD 349 (769)
Q Consensus 312 ~~~~~~~~~~~~~~~~R~~hs~~~~~~~iyv~GG~~~~ 349 (769)
..+..+.++.-++.+++.||.++.
T Consensus 349 --------------~~~v~~~~~s~dg~~l~s~~~dg~ 372 (401)
T 4aez_A 349 --------------DTRVLYSALSPDGRILSTAASDEN 372 (401)
T ss_dssp --------------SSCCCEEEECTTSSEEEEECTTSE
T ss_pred --------------CCCEEEEEECCCCCEEEEEeCCCc
Confidence 023333334445677788887764
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=91.48 E-value=11 Score=43.41 Aligned_cols=161 Identities=13% Similarity=0.030 Sum_probs=74.7
Q ss_pred cCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCC
Q 004198 125 TDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPS 204 (769)
Q Consensus 125 ~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~ 204 (769)
...++++|+.+. +-..+.. ......+-..+....++..++++..+.......++.+|+.+.. .+..+........
T Consensus 234 ~~~l~~~d~~~~--~~~~~~~--~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~-~~~~~~~~~~~~~ 308 (706)
T 2z3z_A 234 HVTVGIYHLATG--KTVYLQT--GEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR-FVRTLFVETDKHY 308 (706)
T ss_dssp EEEEEEEETTTT--EEEECCC--CSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC-EEEEEEEEECSSC
T ss_pred eeEEEEEECCCC--ceEeecc--CCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc-eeeEEEEccCCCe
Confidence 467999999883 3444421 1111122223333334444444444433345678999997751 2333321100000
Q ss_pred cccccEEEEec--CCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-C-CEEEEEecccCC
Q 004198 205 ARMYATASARS--DGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-G-ARLHVTGGALRG 280 (769)
Q Consensus 205 ~r~~hsa~~~~--~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~-~~i~V~GG~~~~ 280 (769)
........... ++.+++.+..++ ...+|.++.... ....+... ..... ...++- + +.|++.+.....
T Consensus 309 ~~~~~~~~~sp~~dg~~l~~~~~~g----~~~l~~~~~~~~---~~~~l~~~-~~~v~-~~~~~spdg~~l~~~~~~~~~ 379 (706)
T 2z3z_A 309 VEPLHPLTFLPGSNNQFIWQSRRDG----WNHLYLYDTTGR---LIRQVTKG-EWEVT-NFAGFDPKGTRLYFESTEASP 379 (706)
T ss_dssp CCCCSCCEECTTCSSEEEEEECTTS----SCEEEEEETTSC---EEEECCCS-SSCEE-EEEEECTTSSEEEEEESSSCT
T ss_pred ECccCCceeecCCCCEEEEEEccCC----ccEEEEEECCCC---EEEecCCC-CeEEE-eeeEEcCCCCEEEEEecCCCC
Confidence 00012233446 788666654432 356888875433 33333221 11111 112222 3 455555442211
Q ss_pred CCcccCCCcEEEEECCCCcEEecc
Q 004198 281 GRAIEGEAAVAVLDTAAGVWLDRN 304 (769)
Q Consensus 281 ~~~~~~~~~v~~yd~~t~~W~~~~ 304 (769)
. ...++.+|..+.+.+.+.
T Consensus 380 ~-----~~~l~~~d~~~~~~~~l~ 398 (706)
T 2z3z_A 380 L-----ERHFYCIDIKGGKTKDLT 398 (706)
T ss_dssp T-----CBEEEEEETTCCCCEESC
T ss_pred c-----eEEEEEEEcCCCCceecc
Confidence 1 246899999887766654
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=91.35 E-value=3.7 Score=41.62 Aligned_cols=167 Identities=8% Similarity=-0.003 Sum_probs=95.7
Q ss_pred CcccccceeecCCCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEE-Ee
Q 004198 12 SYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWT-RI 90 (769)
Q Consensus 12 ~y~~~~~~w~~~~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~-~l 90 (769)
.+|+.+++-...-+++..-++..++.. +++||+.... .+.+++||+.+.+-. ++
T Consensus 69 ~vD~~Tgkv~~~~~l~~~~FgeGit~~------g~~ly~ltw~-------------------~~~v~v~D~~t~~~~~ti 123 (262)
T 3nol_A 69 KVDIESGKTLQQIELGKRYFGEGISDW------KDKIVGLTWK-------------------NGLGFVWNIRNLRQVRSF 123 (262)
T ss_dssp EECTTTCCEEEEEECCTTCCEEEEEEE------TTEEEEEESS-------------------SSEEEEEETTTCCEEEEE
T ss_pred EEECCCCcEEEEEecCCccceeEEEEe------CCEEEEEEee-------------------CCEEEEEECccCcEEEEE
Confidence 356666555554456666688888888 8899998552 468999999987744 33
Q ss_pred cCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecC-CCCCCccccEEEEECCcEEEEE
Q 004198 91 RPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQG-QGPGPRYGHVMDLVSQRYLVSV 169 (769)
Q Consensus 91 ~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g-~~p~~R~~hs~~~~~~~~l~v~ 169 (769)
+. +-.+.+++.-++.+|+.-| .+.++.+|+.+.+ .-.++.+.. ..|...-. -+...+ +.+|+-
T Consensus 124 ~~------~~eG~glt~dg~~L~~SdG-------s~~i~~iDp~T~~-v~~~I~V~~~g~~~~~lN-ELe~~~-G~lyan 187 (262)
T 3nol_A 124 NY------DGEGWGLTHNDQYLIMSDG-------TPVLRFLDPESLT-PVRTITVTAHGEELPELN-ELEWVD-GEIFAN 187 (262)
T ss_dssp EC------SSCCCCEEECSSCEEECCS-------SSEEEEECTTTCS-EEEEEECEETTEECCCEE-EEEEET-TEEEEE
T ss_pred EC------CCCceEEecCCCEEEEECC-------CCeEEEEcCCCCe-EEEEEEeccCCccccccc-eeEEEC-CEEEEE
Confidence 32 2255677777778888544 3669999999842 234443311 11111111 233344 477752
Q ss_pred ecCCCCCccCceeEEeCCCCCc-eEEEcCCCC-----CCCCcccccEEEEe-cCCEEEEEcc
Q 004198 170 SGNDGKRVLSDAWALDTAQKPY-VWQRLNPEG-----DRPSARMYATASAR-SDGMFLLCGG 224 (769)
Q Consensus 170 GG~~~~~~~~dv~~~d~~~~~~-~W~~v~~~~-----~~P~~r~~hsa~~~-~~g~l~v~GG 224 (769)
- ...+++.+.|+++... .|-.+...- ..+..-.-...+.. ..+.+||.|-
T Consensus 188 ~-----w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 188 V-----WQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp E-----TTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred E-----ccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 2 1246899999988732 344443210 01111122222322 3568888873
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=91.03 E-value=19 Score=38.57 Aligned_cols=178 Identities=13% Similarity=0.093 Sum_probs=82.3
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCcc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRY 154 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~ 154 (769)
+.+..||+.+.+-...-.. ....-.++..++..++.|+. ...+.+||+.+.. -.... . ....
T Consensus 219 g~i~~wd~~~~~~~~~~~~-----~~~~v~~~~~~~~~l~~~~~------dg~i~iwd~~~~~--~~~~~---~--~~~~ 280 (445)
T 2ovr_B 219 ATLRVWDIETGQCLHVLMG-----HVAAVRCVQYDGRRVVSGAY------DFMVKVWDPETET--CLHTL---Q--GHTN 280 (445)
T ss_dssp SEEEEEESSSCCEEEEEEC-----CSSCEEEEEECSSCEEEEET------TSCEEEEEGGGTE--EEEEE---C--CCSS
T ss_pred CEEEEEECCCCcEEEEEcC-----CcccEEEEEECCCEEEEEcC------CCEEEEEECCCCc--EeEEe---c--CCCC
Confidence 4677788876653322111 01112233335555555553 2358899988732 22211 1 1111
Q ss_pred ccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccc
Q 004198 155 GHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLAD 234 (769)
Q Consensus 155 ~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d 234 (769)
......+.+ ..++.|+.++ .+.+||+.+....+.. ... .. .-.+... ++.+++.|+.++ .
T Consensus 281 ~v~~~~~~~-~~l~~~~~d~-----~i~i~d~~~~~~~~~~-~~~----~~--~v~~~~~-~~~~l~~~~~dg------~ 340 (445)
T 2ovr_B 281 RVYSLQFDG-IHVVSGSLDT-----SIRVWDVETGNCIHTL-TGH----QS--LTSGMEL-KDNILVSGNADS------T 340 (445)
T ss_dssp CEEEEEECS-SEEEEEETTS-----CEEEEETTTCCEEEEE-CCC----CS--CEEEEEE-ETTEEEEEETTS------C
T ss_pred ceEEEEECC-CEEEEEeCCC-----eEEEEECCCCCEEEEE-cCC----cc--cEEEEEE-eCCEEEEEeCCC------e
Confidence 122223344 4556666554 4788998776322221 111 11 1122222 344556666432 3
Q ss_pred eEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCcEEe
Q 004198 235 AYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLD 302 (769)
Q Consensus 235 ~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~ 302 (769)
+..++..+. .-..... +.. .....-.++..++.+++.|+.. ..+.+||..+++...
T Consensus 341 i~vwd~~~~-~~~~~~~-~~~-~~~~~v~~~~~~~~~l~s~~~d---------g~v~iwd~~~~~~~~ 396 (445)
T 2ovr_B 341 VKIWDIKTG-QCLQTLQ-GPN-KHQSAVTCLQFNKNFVITSSDD---------GTVKLWDLKTGEFIR 396 (445)
T ss_dssp EEEEETTTC-CEEEEEC-STT-SCSSCEEEEEECSSEEEEEETT---------SEEEEEETTTCCEEE
T ss_pred EEEEECCCC-cEEEEEc-cCC-CCCCCEEEEEECCCEEEEEeCC---------CeEEEEECCCCceee
Confidence 556666433 1111111 110 0111123333466677777632 358999998876543
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=90.57 E-value=16 Score=36.87 Aligned_cols=179 Identities=12% Similarity=0.158 Sum_probs=85.2
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
+.+..+|..+.+....-... ...-..+.. ++..++.|+. ...+.+||+.+.. -..... +. .
T Consensus 45 g~i~iw~~~~~~~~~~~~~h-----~~~v~~~~~~~~~~~l~s~~~------d~~i~vwd~~~~~--~~~~~~-~~---~ 107 (312)
T 4ery_A 45 KLIKIWGAYDGKFEKTISGH-----KLGISDVAWSSDSNLLVSASD------DKTLKIWDVSSGK--CLKTLK-GH---S 107 (312)
T ss_dssp SCEEEEETTTCCEEEEECCC-----SSCEEEEEECTTSSEEEEEET------TSEEEEEETTTCC--EEEEEE-CC---S
T ss_pred CeEEEEeCCCcccchhhccC-----CCceEEEEEcCCCCEEEEECC------CCEEEEEECCCCc--EEEEEc-CC---C
Confidence 46788898888766543211 111112222 3455566653 2458899998743 222211 10 1
Q ss_pred ccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcc
Q 004198 153 RYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPL 232 (769)
Q Consensus 153 R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l 232 (769)
..-.++....+..+++.|+.++ .+.+||+.+.... ..+... .....+.....++.+++.|+.++
T Consensus 108 ~~v~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~~~~-~~~~~~-----~~~v~~~~~~~~~~~l~~~~~d~----- 171 (312)
T 4ery_A 108 NYVFCCNFNPQSNLIVSGSFDE-----SVRIWDVKTGKCL-KTLPAH-----SDPVSAVHFNRDGSLIVSSSYDG----- 171 (312)
T ss_dssp SCEEEEEECSSSSEEEEEETTS-----CEEEEETTTCCEE-EEECCC-----SSCEEEEEECTTSSEEEEEETTS-----
T ss_pred CCEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCEEE-EEecCC-----CCcEEEEEEcCCCCEEEEEeCCC-----
Confidence 1112232333445667777654 4788898776211 122111 11112233346777777777543
Q ss_pred cceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCcE
Q 004198 233 ADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVW 300 (769)
Q Consensus 233 ~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W 300 (769)
.+..++..+. .......... .... ..+++. ++..++.|+. ...+.+||..+.+-
T Consensus 172 -~i~~wd~~~~-~~~~~~~~~~--~~~~-~~~~~~~~~~~l~~~~~---------d~~i~iwd~~~~~~ 226 (312)
T 4ery_A 172 -LCRIWDTASG-QCLKTLIDDD--NPPV-SFVKFSPNGKYILAATL---------DNTLKLWDYSKGKC 226 (312)
T ss_dssp -CEEEEETTTC-CEEEEECCSS--CCCE-EEEEECTTSSEEEEEET---------TTEEEEEETTTTEE
T ss_pred -cEEEEECCCC-ceeeEEeccC--CCce-EEEEECCCCCEEEEEcC---------CCeEEEEECCCCcE
Confidence 3555665533 1111111111 1111 122222 5566666663 23588999987653
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=90.12 E-value=10 Score=39.06 Aligned_cols=197 Identities=9% Similarity=0.097 Sum_probs=93.6
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--C--CEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--G--TMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGP 150 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~--~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p 150 (769)
+.+.+||+.+++|..+...... .....++.+ + +.+++.|+. ...+.+||+.+... .......+ ..
T Consensus 79 g~v~iwd~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~l~~~~~------d~~i~v~d~~~~~~-~~~~~~~~-~~ 147 (379)
T 3jrp_A 79 GKVLIWKEENGRWSQIAVHAVH---SASVNSVQWAPHEYGPLLLVASS------DGKVSVVEFKENGT-TSPIIIDA-HA 147 (379)
T ss_dssp SCEEEEEEETTEEEEEEEECCC---SSCEEEEEECCGGGCSEEEEEET------TSEEEEEECCTTSC-CCEEEEEC-CT
T ss_pred CEEEEEEcCCCceeEeeeecCC---CcceEEEEeCCCCCCCEEEEecC------CCcEEEEecCCCCc-eeeEEecC-CC
Confidence 4688899999988766543111 111222222 2 445555553 24588888877421 11111101 01
Q ss_pred CCccccEEEEEC-------------CcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecC-
Q 004198 151 GPRYGHVMDLVS-------------QRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSD- 216 (769)
Q Consensus 151 ~~R~~hs~~~~~-------------~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~- 216 (769)
..-.++.... +..+++.|+.++ .+.+||+.+....|..+..... ....-.+.....+
T Consensus 148 --~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~--h~~~v~~~~~sp~~ 218 (379)
T 3jrp_A 148 --IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEG--HSDWVRDVAWSPTV 218 (379)
T ss_dssp --TCEEEEEECCCC----------CTTCEEEEEETTS-----CEEEEEEETTTTEEEEEEEECC--CSSCEEEEEECCCC
T ss_pred --CceEEEEEcCccccccccccCCCCCCEEEEEeCCC-----eEEEEEecCCCcceeeEEEEec--ccCcEeEEEECCCC
Confidence 1111222222 346777777665 4777777654334544432210 1111233444566
Q ss_pred --CEEEEEcccCCCCCcccceEEEecCCCC-ceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEE
Q 004198 217 --GMFLLCGGRDASGAPLADAYGLLMHRNG-QWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAV 292 (769)
Q Consensus 217 --g~l~v~GG~~~~~~~l~d~~~ld~~~~~-~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~ 292 (769)
+.+++.|+.++. +..|+..... .+........ .....-.++++. ++.+++.|+.. ..+.+
T Consensus 219 ~~~~~l~s~~~dg~------i~iwd~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~g~~l~~~~~d---------g~i~i 282 (379)
T 3jrp_A 219 LLRSYLASVSQDRT------CIIWTQDNEQGPWKKTLLKEE-KFPDVLWRASWSLSGNVLALSGGD---------NKVTL 282 (379)
T ss_dssp SSSEEEEEEETTSC------EEEEEESSTTSCCEEEESSSS-CCSSCEEEEEECSSSCCEEEEESS---------SSEEE
T ss_pred CCCCeEEEEeCCCE------EEEEeCCCCCccceeeeeccc-cCCCcEEEEEEcCCCCEEEEecCC---------CcEEE
Confidence 788888876532 3444443221 1122222211 111111223332 66677777642 23777
Q ss_pred EECC-CCcEEeccCCc
Q 004198 293 LDTA-AGVWLDRNGLV 307 (769)
Q Consensus 293 yd~~-t~~W~~~~~~~ 307 (769)
|+.. ...|..+....
T Consensus 283 w~~~~~~~~~~~~~~~ 298 (379)
T 3jrp_A 283 WKENLEGKWEPAGEVH 298 (379)
T ss_dssp EEEEETTEEEEEEEEC
T ss_pred EeCCCCCcccccccee
Confidence 7776 46788776653
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=90.05 E-value=4.8 Score=47.30 Aligned_cols=96 Identities=9% Similarity=0.115 Sum_probs=51.1
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--C--CEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--G--TMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGP 150 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~--~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p 150 (769)
+.+.+||..+.++..+.... .....-.++.. + +..++.|+. ...+.++|+.+ .+|..+....
T Consensus 31 g~I~vwd~~~~~~~~~~~l~---~h~~~V~~l~~s~~~~~~~l~s~s~------Dg~I~vwd~~~--~~~~~~~~~~--- 96 (753)
T 3jro_A 31 KTIKIFEVEGETHKLIDTLT---GHEGPVWRVDWAHPKFGTILASCSY------DGKVLIWKEEN--GRWSQIAVHA--- 96 (753)
T ss_dssp TEEEEEEEETTEEEEEEEEC---CCSSCEEEEEECCTTSCSEEEEEET------TSCEEEEEEET--TEEEEEEEEC---
T ss_pred CcEEEEecCCCCCccceecc---CCcCceEEEEecCCCCCCEEEEEeC------CCeEEEEECCC--Cccccccccc---
Confidence 56888898877777664331 11111222222 2 455566654 23489999988 5566554211
Q ss_pred CCccccEEEEE-CC--cEEEEEecCCCCCccCceeEEeCCCC
Q 004198 151 GPRYGHVMDLV-SQ--RYLVSVSGNDGKRVLSDAWALDTAQK 189 (769)
Q Consensus 151 ~~R~~hs~~~~-~~--~~l~v~GG~~~~~~~~dv~~~d~~~~ 189 (769)
.....-..+.+ .+ +.+++.|+.++ .+.+||+.+.
T Consensus 97 ~h~~~V~~v~~sp~~~~~~l~sgs~dg-----~I~vwdl~~~ 133 (753)
T 3jro_A 97 VHSASVNSVQWAPHEYGPLLLVASSDG-----KVSVVEFKEN 133 (753)
T ss_dssp CCSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEECCSS
T ss_pred CCCCCeEEEEECCCCCCCEEEEEeCCC-----cEEEEEeecC
Confidence 11112222233 32 45677777654 4677777654
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=89.91 E-value=12 Score=38.44 Aligned_cols=151 Identities=10% Similarity=0.058 Sum_probs=70.5
Q ss_pred cEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccc
Q 004198 76 SVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYG 155 (769)
Q Consensus 76 dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~ 155 (769)
.+|.+|..+++++.+........| ...+..-++++|+.+..+ ....+++||+.+ .++..+.... .. ...-
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~~~p--~~~a~spdg~l~~~~~~~----~~~~v~~~~~~~--g~~~~~~~~~-~~-~~~p 88 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAATQNP--TYLALSAKDCLYSVDKED----DEGGIAAWQIDG--QTAHKLNTVV-AP-GTPP 88 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEECSCC--CCEEECTTCEEEEEEEET----TEEEEEEEEEET--TEEEEEEEEE-EE-SCCC
T ss_pred EEEEEcCCCCeEEEeeeeeccCCc--ceEEEccCCeEEEEEecC----CCceEEEEEecC--CcEEEeeeee-cC-CCCC
Confidence 477888888888775432111111 112222256777765421 135699999977 4455443200 00 1111
Q ss_pred cEEEEE-CCcEEEEEecCCCCCccCceeEEeCC-CCCceE-EEcCCCCCCCCcc----cccEEEEecCCEEEEEcccCCC
Q 004198 156 HVMDLV-SQRYLVSVSGNDGKRVLSDAWALDTA-QKPYVW-QRLNPEGDRPSAR----MYATASARSDGMFLLCGGRDAS 228 (769)
Q Consensus 156 hs~~~~-~~~~l~v~GG~~~~~~~~dv~~~d~~-~~~~~W-~~v~~~~~~P~~r----~~hsa~~~~~g~l~v~GG~~~~ 228 (769)
..+++. +++.+|+.+..+ +.+.+|++. ....+. ..+...+..|.+| ..+......++.+|+.+..
T Consensus 89 ~~~a~spdg~~l~~~~~~~-----~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~--- 160 (347)
T 3hfq_A 89 AYVAVDEARQLVYSANYHK-----GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLG--- 160 (347)
T ss_dssp SEEEEETTTTEEEEEETTT-----TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETT---
T ss_pred EEEEECCCCCEEEEEeCCC-----CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCC---
Confidence 233344 344566655322 346677764 221111 1222222222211 2344555677777765432
Q ss_pred CCcccceEEEecCCCCceE
Q 004198 229 GAPLADAYGLLMHRNGQWE 247 (769)
Q Consensus 229 ~~~l~d~~~ld~~~~~~W~ 247 (769)
-+.++.|+...++...
T Consensus 161 ---~~~v~~~~~~~~g~~~ 176 (347)
T 3hfq_A 161 ---SDKVYVYNVSDAGQLS 176 (347)
T ss_dssp ---TTEEEEEEECTTSCEE
T ss_pred ---CCEEEEEEECCCCcEE
Confidence 1356667766444443
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=89.84 E-value=0.15 Score=54.23 Aligned_cols=68 Identities=10% Similarity=0.046 Sum_probs=38.9
Q ss_pred CEEEEccCCCCHHHHH-------HHHHHhCCCCCCCCCcceeEEEeccccCCCCChH------HHHHHHHHh-hhcCCCc
Q 004198 582 PVKVFGDLHGQFGDLM-------RLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSL------ETITLLLAL-KIEYPEN 647 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~-------~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~------e~l~ll~~l-k~~~p~~ 647 (769)
.++++||.|.-...-. ++.+.. .+ + -+|++||+++.|..+. +.+..++.- +....-.
T Consensus 5 ~f~~igD~g~g~~~q~~va~~m~~~~~~~--~p-d------~vl~~GD~~y~G~~~~~d~~~~~~f~~~~~~~~~~~~~P 75 (342)
T 3tgh_A 5 RFASLGDWGKDTKGQILNAKYFKQFIKNE--RV-T------FIVSPGSNFIDGVKGLNDPAWKNLYEDVYSEEKGDMYMP 75 (342)
T ss_dssp EEEECCSCBSCCHHHHHHHHHHHHHHHHT--TC-C------EEEECSCSBTTCCCSTTCTHHHHHTTTTSCCGGGTTCSE
T ss_pred EEEEEecCCCCCchHHHHHHHHHHHHhhc--CC-C------EEEECCCcccCCCCcCccHHHHHHHHHHhhhhhhhhCCC
Confidence 4889999997543222 222221 12 1 5788999998887432 222222211 0122234
Q ss_pred eEEecCCcchh
Q 004198 648 VHLIRGNHEAA 658 (769)
Q Consensus 648 v~llrGNHE~~ 658 (769)
++.+.||||..
T Consensus 76 ~~~vlGNHD~~ 86 (342)
T 3tgh_A 76 FFTVLGTRDWT 86 (342)
T ss_dssp EEECCCHHHHT
T ss_pred EEEeCCCCccC
Confidence 69999999975
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=89.83 E-value=18 Score=42.42 Aligned_cols=190 Identities=9% Similarity=0.019 Sum_probs=97.7
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCC-C
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPG-P 152 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~-~ 152 (769)
+-+++||+.+++++.+...+ .+ ...-.+++.. ++.||+... .-+++||+.+ .+|.........+. .
T Consensus 427 ~Gl~~~~~~~~~~~~~~~~~-~~-~~~v~~i~~d~~g~lwigt~--------~Gl~~~~~~~--~~~~~~~~~~~~~~~~ 494 (781)
T 3v9f_A 427 GNISYYNTRLKKFQIIELEK-NE-LLDVRVFYEDKNKKIWIGTH--------AGVFVIDLAS--KKVIHHYDTSNSQLLE 494 (781)
T ss_dssp EEEEEECSSSCEEEECCSTT-TC-CCCEEEEEECTTSEEEEEET--------TEEEEEESSS--SSCCEEECTTTSSCSC
T ss_pred CCEEEEcCCCCcEEEeccCC-CC-CCeEEEEEECCCCCEEEEEC--------CceEEEeCCC--CeEEecccCccccccc
Confidence 45778888888888765321 11 1111223222 357887432 3389999988 44655542111111 1
Q ss_pred ccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcc
Q 004198 153 RYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPL 232 (769)
Q Consensus 153 R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l 232 (769)
..-.+++...++.|++.... .-+++||+.++ ++.........|.... .+...-.+|.+++...
T Consensus 495 ~~i~~i~~d~~g~lWigt~~------~Gl~~~~~~~~--~~~~~~~~~~l~~~~i-~~i~~d~~g~lWi~T~-------- 557 (781)
T 3v9f_A 495 NFVRSIAQDSEGRFWIGTFG------GGVGIYTPDMQ--LVRKFNQYEGFCSNTI-NQIYRSSKGQMWLATG-------- 557 (781)
T ss_dssp SCEEEEEECTTCCEEEEESS------SCEEEECTTCC--EEEEECTTTTCSCSCE-EEEEECTTSCEEEEET--------
T ss_pred ceeEEEEEcCCCCEEEEEcC------CCEEEEeCCCC--eEEEccCCCCCCCCee-EEEEECCCCCEEEEEC--------
Confidence 11223333345566664321 23889999888 7777654322232222 2233335678887431
Q ss_pred cce-EEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccCC
Q 004198 233 ADA-YGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGL 306 (769)
Q Consensus 233 ~d~-~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~ 306 (769)
+-+ +.|+..+. +++........|.... .+++.- ++.|++.+. +.+.+||+++.+++.....
T Consensus 558 ~Glv~~~d~~~~-~~~~~~~~~gl~~~~i-~~i~~d~~g~lW~~t~-----------~Gl~~~~~~~~~~~~~~~~ 620 (781)
T 3v9f_A 558 EGLVCFPSARNF-DYQVFQRKEGLPNTHI-RAISEDKNGNIWASTN-----------TGISCYITSKKCFYTYDHS 620 (781)
T ss_dssp TEEEEESCTTTC-CCEEECGGGTCSCCCC-CEEEECSSSCEEEECS-----------SCEEEEETTTTEEEEECGG
T ss_pred CCceEEECCCCC-cEEEccccCCCCCceE-EEEEECCCCCEEEEcC-----------CceEEEECCCCceEEeccc
Confidence 224 55665433 2332221111122223 233332 577777532 3489999999988877543
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=89.58 E-value=11 Score=38.23 Aligned_cols=178 Identities=12% Similarity=0.032 Sum_probs=95.5
Q ss_pred cccccceeecCCCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEE-Eec
Q 004198 13 YRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWT-RIR 91 (769)
Q Consensus 13 y~~~~~~w~~~~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~-~l~ 91 (769)
+|+.+++-...-+++...+++.++.. +++||+..- ..+.+++||+.+.+=. .++
T Consensus 49 iD~~tg~v~~~i~l~~~~fgeGi~~~------g~~lyv~t~-------------------~~~~v~viD~~t~~v~~~i~ 103 (266)
T 2iwa_A 49 VALQTGKVENIHKMDDSYFGEGLTLL------NEKLYQVVW-------------------LKNIGFIYDRRTLSNIKNFT 103 (266)
T ss_dssp EETTTCCEEEEEECCTTCCEEEEEEE------TTEEEEEET-------------------TCSEEEEEETTTTEEEEEEE
T ss_pred EECCCCCEEEEEecCCCcceEEEEEe------CCEEEEEEe-------------------cCCEEEEEECCCCcEEEEEE
Confidence 34444444333334444567777777 789998854 2468999999987533 232
Q ss_pred CCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCc-cccEEEEECCcEEEEEe
Q 004198 92 PAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPR-YGHVMDLVSQRYLVSVS 170 (769)
Q Consensus 92 ~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R-~~hs~~~~~~~~l~v~G 170 (769)
.+ .| .+.+++.-++.+|+.-| .+.++++|+.+.+ .-..+.+ +..+.+. .-..+... ++.+|+--
T Consensus 104 -~g-~~---~g~glt~Dg~~l~vs~g-------s~~l~viD~~t~~-v~~~I~V-g~~~~p~~~~nele~~-dg~lyvn~ 168 (266)
T 2iwa_A 104 -HQ-MK---DGWGLATDGKILYGSDG-------TSILYEIDPHTFK-LIKKHNV-KYNGHRVIRLNELEYI-NGEVWANI 168 (266)
T ss_dssp -CC-SS---SCCEEEECSSSEEEECS-------SSEEEEECTTTCC-EEEEEEC-EETTEECCCEEEEEEE-TTEEEEEE
T ss_pred -CC-CC---CeEEEEECCCEEEEECC-------CCeEEEEECCCCc-EEEEEEE-CCCCcccccceeEEEE-CCEEEEec
Confidence 22 12 34555555678998643 4679999998832 2334433 2222221 11133334 44777643
Q ss_pred cCCCCCccCceeEEeCCCCCc-eEEEcCCC------CCCCCcccccEEEEec-CCEEEEEcccCCCCCcccceEEEecC
Q 004198 171 GNDGKRVLSDAWALDTAQKPY-VWQRLNPE------GDRPSARMYATASARS-DGMFLLCGGRDASGAPLADAYGLLMH 241 (769)
Q Consensus 171 G~~~~~~~~dv~~~d~~~~~~-~W~~v~~~------~~~P~~r~~hsa~~~~-~g~l~v~GG~~~~~~~l~d~~~ld~~ 241 (769)
. ..+++.+.|+++... .|-.+... ...+..-.-+...... .+.+||.|+. .+.++..+..
T Consensus 169 ~-----~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~------~~~v~~i~l~ 236 (266)
T 2iwa_A 169 W-----QTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKL------WPKLFEIKLH 236 (266)
T ss_dssp T-----TSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETT------CSEEEEEEEE
T ss_pred C-----CCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCC------CCeEEEEEEe
Confidence 2 246899999988732 34443210 0001111112333333 4588988864 3556666654
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.46 E-value=21 Score=36.60 Aligned_cols=177 Identities=14% Similarity=0.122 Sum_probs=86.8
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEE-ECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAA-VGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPR 153 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~-~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R 153 (769)
+.+..+|+.+.+-...-..+ +. ...+++. -++..++.|+. ...+.+||+.+....+... + ...
T Consensus 102 ~~i~lWd~~~~~~~~~~~~~--~~--~~~~~~~spdg~~l~~g~~------dg~v~i~~~~~~~~~~~~~---~---~~~ 165 (321)
T 3ow8_A 102 AHIRLWDLENGKQIKSIDAG--PV--DAWTLAFSPDSQYLATGTH------VGKVNIFGVESGKKEYSLD---T---RGK 165 (321)
T ss_dssp SEEEEEETTTTEEEEEEECC--TT--CCCCEEECTTSSEEEEECT------TSEEEEEETTTCSEEEEEE---C---SSS
T ss_pred CcEEEEECCCCCEEEEEeCC--Cc--cEEEEEECCCCCEEEEEcC------CCcEEEEEcCCCceeEEec---C---CCc
Confidence 57888999887644322211 11 1112222 23455555553 2458889988754322211 1 111
Q ss_pred cccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEE-EcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcc
Q 004198 154 YGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQ-RLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPL 232 (769)
Q Consensus 154 ~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~-~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l 232 (769)
.-.+++...++.+++.|+.++ .+.+||+.+. +-. .+... ...-.+.....++.+++.|+.+.
T Consensus 166 ~v~~~~~spdg~~lasg~~dg-----~i~iwd~~~~--~~~~~~~~h-----~~~v~~l~~spd~~~l~s~s~dg----- 228 (321)
T 3ow8_A 166 FILSIAYSPDGKYLASGAIDG-----IINIFDIATG--KLLHTLEGH-----AMPIRSLTFSPDSQLLVTASDDG----- 228 (321)
T ss_dssp CEEEEEECTTSSEEEEEETTS-----CEEEEETTTT--EEEEEECCC-----SSCCCEEEECTTSCEEEEECTTS-----
T ss_pred eEEEEEECCCCCEEEEEcCCC-----eEEEEECCCC--cEEEEEccc-----CCceeEEEEcCCCCEEEEEcCCC-----
Confidence 222343444556777777654 4788998876 322 22211 11112344457788888887543
Q ss_pred cceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCc
Q 004198 233 ADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGV 299 (769)
Q Consensus 233 ~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~ 299 (769)
.+..++..... ..- ...+- ...-.++++. ++..++.|+.. ..+.+||..+.+
T Consensus 229 -~i~iwd~~~~~-~~~-~~~~h---~~~v~~~~~sp~~~~l~s~s~D---------~~v~iwd~~~~~ 281 (321)
T 3ow8_A 229 -YIKIYDVQHAN-LAG-TLSGH---ASWVLNVAFCPDDTHFVSSSSD---------KSVKVWDVGTRT 281 (321)
T ss_dssp -CEEEEETTTCC-EEE-EECCC---SSCEEEEEECTTSSEEEEEETT---------SCEEEEETTTTE
T ss_pred -eEEEEECCCcc-eeE-EEcCC---CCceEEEEECCCCCEEEEEeCC---------CcEEEEeCCCCE
Confidence 24555554321 111 11111 0111122332 56677777642 348899987764
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=88.42 E-value=22 Score=35.63 Aligned_cols=150 Identities=13% Similarity=0.061 Sum_probs=72.2
Q ss_pred CEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCC
Q 004198 110 TMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQK 189 (769)
Q Consensus 110 ~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~ 189 (769)
+..++.|+. ...+.+||+.+.. ......... .. ..-.++....++.+++.|+.++ .+.+||+.+.
T Consensus 109 ~~~l~~~~~------d~~i~~~d~~~~~--~~~~~~~~~-~~-~~i~~~~~~~~~~~l~~~~~dg-----~v~~~d~~~~ 173 (337)
T 1gxr_A 109 GCTLIVGGE------ASTLSIWDLAAPT--PRIKAELTS-SA-PACYALAISPDSKVCFSCCSDG-----NIAVWDLHNQ 173 (337)
T ss_dssp SSEEEEEES------SSEEEEEECCCC----EEEEEEEC-SS-SCEEEEEECTTSSEEEEEETTS-----CEEEEETTTT
T ss_pred CCEEEEEcC------CCcEEEEECCCCC--cceeeeccc-CC-CceEEEEECCCCCEEEEEeCCC-----cEEEEeCCCC
Confidence 444555543 2458999998843 222211001 11 1112333334445666676554 4888998876
Q ss_pred CceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-C
Q 004198 190 PYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-G 268 (769)
Q Consensus 190 ~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~ 268 (769)
+....-.. ......+.....++.+++.|+.+ ..+..++..+...-..... ...-.++++. +
T Consensus 174 --~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~d------g~i~~~d~~~~~~~~~~~~------~~~v~~~~~s~~ 235 (337)
T 1gxr_A 174 --TLVRQFQG----HTDGASCIDISNDGTKLWTGGLD------NTVRSWDLREGRQLQQHDF------TSQIFSLGYCPT 235 (337)
T ss_dssp --EEEEEECC----CSSCEEEEEECTTSSEEEEEETT------SEEEEEETTTTEEEEEEEC------SSCEEEEEECTT
T ss_pred --ceeeeeec----ccCceEEEEECCCCCEEEEEecC------CcEEEEECCCCceEeeecC------CCceEEEEECCC
Confidence 33222111 11122334444577677777643 3466667654311111111 1111233332 5
Q ss_pred CEEEEEecccCCCCcccCCCcEEEEECCCCcEE
Q 004198 269 ARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWL 301 (769)
Q Consensus 269 ~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~ 301 (769)
+..+++|+.. ..+.+||..+.+-.
T Consensus 236 ~~~l~~~~~~---------~~i~~~~~~~~~~~ 259 (337)
T 1gxr_A 236 GEWLAVGMES---------SNVEVLHVNKPDKY 259 (337)
T ss_dssp SSEEEEEETT---------SCEEEEETTSSCEE
T ss_pred CCEEEEEcCC---------CcEEEEECCCCCeE
Confidence 6677777632 34899999877543
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=88.37 E-value=44 Score=39.07 Aligned_cols=189 Identities=6% Similarity=-0.048 Sum_probs=96.7
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecC---CCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQG---QGP 150 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g---~~p 150 (769)
+-+++||+.+++++.+...........-.+++.. ++.||+... +-+++||+.+ .+|..+.... ..+
T Consensus 427 ~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~--------~Gl~~~~~~~--~~~~~~~~~~~~~~~~ 496 (795)
T 4a2l_A 427 GGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL--------SALVRFNPEQ--RSFTTIEKEKDGTPVV 496 (795)
T ss_dssp TEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES--------SCEEEEETTT--TEEEECCBCTTCCBCC
T ss_pred CceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec--------CceeEEeCCC--CeEEEccccccccccC
Confidence 4578889888888877542111001111222222 357777542 2389999988 5687774321 111
Q ss_pred CCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCC--CcccccEEEEecCCEEEEEcccCCC
Q 004198 151 GPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRP--SARMYATASARSDGMFLLCGGRDAS 228 (769)
Q Consensus 151 ~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P--~~r~~hsa~~~~~g~l~v~GG~~~~ 228 (769)
. ..-.++....++.+++... .-+++||+.+. ++ ........+ ......+...-.+|.+++...
T Consensus 497 ~-~~i~~i~~d~~g~lWigt~-------~Gl~~~~~~~~--~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~---- 561 (795)
T 4a2l_A 497 S-KQITTLFRDSHKRLWIGGE-------EGLSVFKQEGL--DI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR---- 561 (795)
T ss_dssp C-CCEEEEEECTTCCEEEEES-------SCEEEEEEETT--EE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES----
T ss_pred C-ceEEEEEECCCCCEEEEeC-------CceEEEeCCCC--eE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC----
Confidence 1 1112333334556777442 24889999887 66 433210001 111112223335678887431
Q ss_pred CCcccceEEEecCCCCceEEEeC-CCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccCC
Q 004198 229 GAPLADAYGLLMHRNGQWEWTLA-PGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGL 306 (769)
Q Consensus 229 ~~~l~d~~~ld~~~~~~W~W~~~-~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~ 306 (769)
.-+++|+..+. +++.... .+. |.... .+.+.- ++.|++.+. ..+.+||+++.+++.+...
T Consensus 562 ----~Gl~~~d~~~~-~~~~~~~~~gl-~~~~i-~~i~~d~~g~lWi~t~-----------~Gl~~~~~~~~~~~~~~~~ 623 (795)
T 4a2l_A 562 ----EGFYCFNEKDK-QIKRYNTTNGL-PNNVV-YGILEDSFGRLWLSTN-----------RGISCFNPETEKFRNFTES 623 (795)
T ss_dssp ----SCEEEEETTTT-EEEEECGGGTC-SCSCE-EEEEECTTSCEEEEET-----------TEEEEEETTTTEEEEECGG
T ss_pred ----CCceeECCCCC-cEEEeCCCCCC-chhhe-EEEEECCCCCEEEEcC-----------CceEEEcCCCCcEEEcCCc
Confidence 24677887654 3322211 122 22222 222222 567777642 3489999999998876543
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=88.36 E-value=22 Score=35.56 Aligned_cols=191 Identities=10% Similarity=0.069 Sum_probs=91.5
Q ss_pred CCcEEEEECCCCcEEEecCCCCCCcccccceEEEE-C-CEEEEECccCCCCCCcCcEEEEEccCCcceEEEe-eecCCCC
Q 004198 74 TNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-G-TMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRV-VVQGQGP 150 (769)
Q Consensus 74 ~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~-~-~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~-~~~g~~p 150 (769)
.+.+++||+.++++..+...........-++++.. + +.+|+.... +.+++||+. .+ ...+ .......
T Consensus 45 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~-------~~l~~~d~~-g~--~~~~~~~~~~~~ 114 (314)
T 1pjx_A 45 AGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR-------LGLLVVQTD-GT--FEEIAKKDSEGR 114 (314)
T ss_dssp CCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT-------TEEEEEETT-SC--EEECCSBCTTSC
T ss_pred CCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC-------CCEEEEeCC-CC--EEEEEeccCCCc
Confidence 35799999999998876531000011112333332 4 688886541 258999987 43 3333 2111111
Q ss_pred CCccccEEEEECCcEEEEEecCCC----------CCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEe----cC
Q 004198 151 GPRYGHVMDLVSQRYLVSVSGNDG----------KRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASAR----SD 216 (769)
Q Consensus 151 ~~R~~hs~~~~~~~~l~v~GG~~~----------~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~----~~ 216 (769)
....-+.++...++.+|+....++ ......+++||+. . +...+.... ......+.. .+
T Consensus 115 ~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g--~~~~~~~~~-----~~~~~i~~~~~~d~d 186 (314)
T 1pjx_A 115 RMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-G--QMIQVDTAF-----QFPNGIAVRHMNDGR 186 (314)
T ss_dssp BCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-S--CEEEEEEEE-----SSEEEEEEEECTTSC
T ss_pred cccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-C--CEEEeccCC-----CCcceEEEecccCCC
Confidence 111223454555557777654321 1123578999987 4 343332110 011233334 55
Q ss_pred C-EEEEEcccCCCCCcccceEEEecCCCCce----EEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcE
Q 004198 217 G-MFLLCGGRDASGAPLADAYGLLMHRNGQW----EWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAV 290 (769)
Q Consensus 217 g-~l~v~GG~~~~~~~l~d~~~ld~~~~~~W----~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v 290 (769)
+ .+|+.... .+.++.|+...++.+ .+...+... ...-..+++- ++.+||.... .+.+
T Consensus 187 g~~l~v~~~~------~~~i~~~~~~~~g~~~~~~~~~~~~~~~--~~~p~~i~~d~~G~l~v~~~~---------~~~i 249 (314)
T 1pjx_A 187 PYQLIVAETP------TKKLWSYDIKGPAKIENKKVWGHIPGTH--EGGADGMDFDEDNNLLVANWG---------SSHI 249 (314)
T ss_dssp EEEEEEEETT------TTEEEEEEEEETTEEEEEEEEEECCCCS--SCEEEEEEEBTTCCEEEEEET---------TTEE
T ss_pred CCEEEEEECC------CCeEEEEECCCCCccccceEEEECCCCC--CCCCCceEECCCCCEEEEEcC---------CCEE
Confidence 6 56665421 245677775423322 122222110 0111233333 5778876421 2358
Q ss_pred EEEECCCCc
Q 004198 291 AVLDTAAGV 299 (769)
Q Consensus 291 ~~yd~~t~~ 299 (769)
.+||+++++
T Consensus 250 ~~~d~~~g~ 258 (314)
T 1pjx_A 250 EVFGPDGGQ 258 (314)
T ss_dssp EEECTTCBS
T ss_pred EEEcCCCCc
Confidence 999988543
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=88.18 E-value=18 Score=38.55 Aligned_cols=94 Identities=15% Similarity=0.140 Sum_probs=44.7
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCcc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRY 154 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~ 154 (769)
+.+.++|+.+++-...... . .....+...++.+++.|+. ...++.+|.......-..+. +. . ..
T Consensus 169 g~v~iWd~~~~~~~~~~~~---h--~~~v~~~s~~~~~l~sgs~------d~~i~~~d~~~~~~~~~~~~--~h-~--~~ 232 (420)
T 4gga_A 169 AEVQLWDVQQQKRLRNMTS---H--SARVGSLSWNSYILSSGSR------SGHIHHHDVRVAEHHVATLS--GH-S--QE 232 (420)
T ss_dssp SCEEEEETTTTEEEEEECC---C--SSCEEEEEEETTEEEEEET------TSEEEEEETTSSSCEEEEEE--CC-S--SC
T ss_pred CeEEEEEcCCCcEEEEEeC---C--CCceEEEeeCCCEEEEEeC------CCceeEeeecccceeeEEec--cc-c--cc
Confidence 5688889988764332211 1 1122333445556666653 24477888776332222221 11 1 11
Q ss_pred ccEEEEECCcEEEEEecCCCCCccCceeEEeCCCC
Q 004198 155 GHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQK 189 (769)
Q Consensus 155 ~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~ 189 (769)
-..+....++.+++.|+.++ .+.++|..+.
T Consensus 233 ~~~~~~~~~g~~l~s~~~D~-----~v~i~~~~~~ 262 (420)
T 4gga_A 233 VCGLRWAPDGRHLASGGNDN-----LVNVWPSAPG 262 (420)
T ss_dssp EEEEEECTTSSEEEEEETTS-----CEEEEESSCC
T ss_pred eeeeeecCCCCeeeeeeccc-----cceEEeeccc
Confidence 11222233345666666554 3566666544
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=88.17 E-value=24 Score=37.07 Aligned_cols=94 Identities=9% Similarity=0.052 Sum_probs=46.7
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPR 153 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R 153 (769)
+.+..||+.+.+-...-.. ....-.+++.. ++.+++.|+. ...+.+||+.+.... ..+. + ...
T Consensus 119 g~i~iwd~~~~~~~~~~~~----h~~~v~~~~~~~~~~~l~s~s~------d~~i~iwd~~~~~~~-~~~~--~---h~~ 182 (420)
T 3vl1_A 119 GDIKVLDSNFNLQREIDQA----HVSEITKLKFFPSGEALISSSQ------DMQLKIWSVKDGSNP-RTLI--G---HRA 182 (420)
T ss_dssp SCEEEECTTSCEEEEETTS----SSSCEEEEEECTTSSEEEEEET------TSEEEEEETTTCCCC-EEEE--C---CSS
T ss_pred CCEEEEeCCCcceeeeccc----ccCccEEEEECCCCCEEEEEeC------CCeEEEEeCCCCcCc-eEEc--C---CCC
Confidence 4688889887665443211 11111122222 3445555553 245899999874311 1121 1 111
Q ss_pred cccEEEEECCcEEEEEecCCCCCccCceeEEeCCCC
Q 004198 154 YGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQK 189 (769)
Q Consensus 154 ~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~ 189 (769)
.-.++....+..+++.|+.++ .+.+||+.+.
T Consensus 183 ~v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~ 213 (420)
T 3vl1_A 183 TVTDIAIIDRGRNVLSASLDG-----TIRLWECGTG 213 (420)
T ss_dssp CEEEEEEETTTTEEEEEETTS-----CEEEEETTTT
T ss_pred cEEEEEEcCCCCEEEEEcCCC-----cEEEeECCCC
Confidence 112333444445666777654 4778888776
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=87.69 E-value=17 Score=36.95 Aligned_cols=146 Identities=10% Similarity=0.115 Sum_probs=64.7
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcc--eEEEeeecC----
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKF--KWHRVVVQG---- 147 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~--~W~~~~~~g---- 147 (769)
+.+.+||+.+.+....-... .+ -.+++.. ++..++.++.+ .......+.+||+.+... .+.......
T Consensus 96 g~i~iwd~~~~~~~~~~~~~---~~--v~~~~~~~~~~~l~~~~~~-~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~ 169 (369)
T 3zwl_B 96 YSIKLWDVSNGQCVATWKSP---VP--VKRVEFSPCGNYFLAILDN-VMKNPGSINIYEIERDSATHELTKVSEEPIHKI 169 (369)
T ss_dssp TEEEEEETTTCCEEEEEECS---SC--EEEEEECTTSSEEEEEECC-BTTBCCEEEEEEEEECTTTCCEEEECSSCSEEE
T ss_pred CeEEEEECCCCcEEEEeecC---CC--eEEEEEccCCCEEEEecCC-ccCCCCEEEEEEecCCccceeecccccceeeec
Confidence 46888999887654433221 11 1112221 33444444321 111234577887765321 222221000
Q ss_pred -CCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccC
Q 004198 148 -QGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRD 226 (769)
Q Consensus 148 -~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~ 226 (769)
.......-.+++...+..+++.|+.++ .+.+||+.+..-....+... .....+.....++.+++.|+.+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~d 239 (369)
T 3zwl_B 170 ITHEGLDAATVAGWSTKGKYIIAGHKDG-----KISKYDVSNNYEYVDSIDLH-----EKSISDMQFSPDLTYFITSSRD 239 (369)
T ss_dssp ECCTTCCCEEEEEECGGGCEEEEEETTS-----EEEEEETTTTTEEEEEEECC-----SSCEEEEEECTTSSEEEEEETT
T ss_pred cCCcCccceeEEEEcCCCCEEEEEcCCC-----EEEEEECCCCcEeEEEEecC-----CCceeEEEECCCCCEEEEecCC
Confidence 000000122232333445666666543 58889998731122222211 1122334445677777777643
Q ss_pred CCCCcccceEEEecCC
Q 004198 227 ASGAPLADAYGLLMHR 242 (769)
Q Consensus 227 ~~~~~l~d~~~ld~~~ 242 (769)
..+..++..+
T Consensus 240 ------~~i~v~d~~~ 249 (369)
T 3zwl_B 240 ------TNSFLVDVST 249 (369)
T ss_dssp ------SEEEEEETTT
T ss_pred ------ceEEEEECCC
Confidence 2456666654
|
| >3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=87.33 E-value=0.36 Score=54.59 Aligned_cols=66 Identities=15% Similarity=0.086 Sum_probs=41.5
Q ss_pred CEEEEccCCCCHH----------------HHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCCh----------HHHHH
Q 004198 582 PVKVFGDLHGQFG----------------DLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHS----------LETIT 635 (769)
Q Consensus 582 ~i~viGDiHG~~~----------------~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s----------~e~l~ 635 (769)
.|+.++|+||++. .+..+++........ .-+|..||.++..+.+ ..++.
T Consensus 21 ~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~-----~l~l~~GD~~~gs~~~~~~~~~~~~~~~~~~ 95 (527)
T 3qfk_A 21 AFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQ-----SFKIDNGDFLQGSPFCNYLIAHSGSSQPLVD 95 (527)
T ss_dssp EEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSSE-----EEEEECSCCSSSSHHHHHHHHTTCSSHHHHH
T ss_pred EEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCCC-----EEEEECCCcCCCcHHHHHHhhcccCcchHHH
Confidence 3889999999863 566666665422111 1234479999987543 34555
Q ss_pred HHHHhhhcCCCceEEecCCcch
Q 004198 636 LLLALKIEYPENVHLIRGNHEA 657 (769)
Q Consensus 636 ll~~lk~~~p~~v~llrGNHE~ 657 (769)
+|..+. --++..||||.
T Consensus 96 ~ln~lg-----~D~~t~GNHef 112 (527)
T 3qfk_A 96 FYNRMA-----FDFGTLGNHEF 112 (527)
T ss_dssp HHHHTC-----CCEECCCGGGG
T ss_pred HHHhcC-----CcEEecccccc
Confidence 665553 23566899994
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=87.05 E-value=34 Score=39.11 Aligned_cols=116 Identities=9% Similarity=-0.055 Sum_probs=56.0
Q ss_pred cCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCC
Q 004198 178 LSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPS 257 (769)
Q Consensus 178 ~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~ 257 (769)
...++++|+.+. +-..+... . .............++..++++..+... ....++.++..+...............
T Consensus 234 ~~~l~~~d~~~~--~~~~~~~~-~-~~~~~~~~~~~spdg~~l~~~~~~~~~-~~~~v~~~d~~~g~~~~~~~~~~~~~~ 308 (706)
T 2z3z_A 234 HVTVGIYHLATG--KTVYLQTG-E-PKEKFLTNLSWSPDENILYVAEVNRAQ-NECKVNAYDAETGRFVRTLFVETDKHY 308 (706)
T ss_dssp EEEEEEEETTTT--EEEECCCC-S-CTTCEEEEEEECTTSSEEEEEEECTTS-CEEEEEEEETTTCCEEEEEEEEECSSC
T ss_pred eeEEEEEECCCC--ceEeeccC-C-CCceeEeeEEEECCCCEEEEEEeCCCC-CeeEEEEEECCCCceeeEEEEccCCCe
Confidence 356899999887 44444321 0 111222233445677655555443322 245778888764312222211100000
Q ss_pred cccceEEEE-e--CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccC
Q 004198 258 PRYQHAAVF-V--GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNG 305 (769)
Q Consensus 258 ~R~~hs~~~-~--~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~ 305 (769)
.......++ - ++++++.+...+ ...+|.+|......+.+..
T Consensus 309 ~~~~~~~~~sp~~dg~~l~~~~~~g-------~~~l~~~~~~~~~~~~l~~ 352 (706)
T 2z3z_A 309 VEPLHPLTFLPGSNNQFIWQSRRDG-------WNHLYLYDTTGRLIRQVTK 352 (706)
T ss_dssp CCCCSCCEECTTCSSEEEEEECTTS-------SCEEEEEETTSCEEEECCC
T ss_pred ECccCCceeecCCCCEEEEEEccCC-------ccEEEEEECCCCEEEecCC
Confidence 000112233 2 677666554322 3468999977777776643
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=86.96 E-value=38 Score=39.54 Aligned_cols=181 Identities=7% Similarity=-0.016 Sum_probs=93.3
Q ss_pred cEEEEECCCCcEEEecCCCCCCcc-cccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCc
Q 004198 76 SVHLYDVLTRKWTRIRPAGEPPSP-RAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPR 153 (769)
Q Consensus 76 dv~~yD~~~~~W~~l~~~g~~P~~-R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R 153 (769)
-+++||+.+++|+........+.+ ..-.+++.. ++.||+... . .-+++||+.+ .++..+.....++...
T Consensus 470 Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~-----~Gl~~~~~~~--~~~~~~~~~~~l~~~~ 540 (781)
T 3v9f_A 470 GVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF--G-----GGVGIYTPDM--QLVRKFNQYEGFCSNT 540 (781)
T ss_dssp EEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEES--S-----SCEEEECTTC--CEEEEECTTTTCSCSC
T ss_pred ceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEc--C-----CCEEEEeCCC--CeEEEccCCCCCCCCe
Confidence 488999999998877543211111 111222222 357777432 1 2389999988 5677774322222221
Q ss_pred cccEEEEECCcEEEEEecCCCCCccCce-eEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcc
Q 004198 154 YGHVMDLVSQRYLVSVSGNDGKRVLSDA-WALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPL 232 (769)
Q Consensus 154 ~~hs~~~~~~~~l~v~GG~~~~~~~~dv-~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l 232 (769)
. .++....++.|++... +-+ .+||+.++ ++.........|.... .+.+.-.+|.|++.+.
T Consensus 541 i-~~i~~d~~g~lWi~T~-------~Glv~~~d~~~~--~~~~~~~~~gl~~~~i-~~i~~d~~g~lW~~t~-------- 601 (781)
T 3v9f_A 541 I-NQIYRSSKGQMWLATG-------EGLVCFPSARNF--DYQVFQRKEGLPNTHI-RAISEDKNGNIWASTN-------- 601 (781)
T ss_dssp E-EEEEECTTSCEEEEET-------TEEEEESCTTTC--CCEEECGGGTCSCCCC-CEEEECSSSCEEEECS--------
T ss_pred e-EEEEECCCCCEEEEEC-------CCceEEECCCCC--cEEEccccCCCCCceE-EEEEECCCCCEEEEcC--------
Confidence 1 2222334456666432 235 88898887 5555443222333332 4455556788888642
Q ss_pred cceEEEecCCCCceEEEe-CCCCCCCcccc-eEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCC
Q 004198 233 ADAYGLLMHRNGQWEWTL-APGVAPSPRYQ-HAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAA 297 (769)
Q Consensus 233 ~d~~~ld~~~~~~W~W~~-~~~~~P~~R~~-hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t 297 (769)
+-+.+|+..+. ++.... ..+. +...+. .+++.. ++.| .|||. +.+.+||++.
T Consensus 602 ~Gl~~~~~~~~-~~~~~~~~dGl-~~~~f~~~~~~~~~~G~l-~~g~~----------~Gl~~f~p~~ 656 (781)
T 3v9f_A 602 TGISCYITSKK-CFYTYDHSNNI-PQGSFISGCVTKDHNGLI-YFGSI----------NGLCFFNPDI 656 (781)
T ss_dssp SCEEEEETTTT-EEEEECGGGTC-CSSCEEEEEEEECTTSCE-EEEET----------TEEEEECSCC
T ss_pred CceEEEECCCC-ceEEecccCCc-cccccccCceEECCCCEE-EEECC----------CceEEEChhh
Confidence 34677887654 222222 2233 333332 233333 4555 45662 3478888864
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=86.95 E-value=5.7 Score=40.27 Aligned_cols=137 Identities=12% Similarity=-0.039 Sum_probs=83.0
Q ss_pred cccccceeecCCCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEE-Eec
Q 004198 13 YRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWT-RIR 91 (769)
Q Consensus 13 y~~~~~~w~~~~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~-~l~ 91 (769)
+|+.+++-...- +|..-++..++.. +++||+.... .+.+++||+.+.+-. +++
T Consensus 80 iD~~Tgkv~~~~-l~~~~FgeGit~~------g~~Ly~ltw~-------------------~~~v~V~D~~Tl~~~~ti~ 133 (268)
T 3nok_A 80 LSLESAQPVWME-RLGNIFAEGLASD------GERLYQLTWT-------------------EGLLFTWSGMPPQRERTTR 133 (268)
T ss_dssp CCSSCSSCSEEE-ECTTCCEEEEEEC------SSCEEEEESS-------------------SCEEEEEETTTTEEEEEEE
T ss_pred EECCCCcEEeEE-CCCCcceeEEEEe------CCEEEEEEcc-------------------CCEEEEEECCcCcEEEEEe
Confidence 455554444333 5666678888887 8899998542 368999999987644 333
Q ss_pred CCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccc-cEEEEECCcEEEEEe
Q 004198 92 PAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYG-HVMDLVSQRYLVSVS 170 (769)
Q Consensus 92 ~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~-hs~~~~~~~~l~v~G 170 (769)
. +-.+.+++..++.+|+.-| .+.++.+|+.+.+ .-.++.+ +..+.+... --+...+ +.+|+--
T Consensus 134 ~------~~eGwGLt~Dg~~L~vSdG-------s~~l~~iDp~T~~-v~~~I~V-~~~g~~v~~lNeLe~~d-G~lyanv 197 (268)
T 3nok_A 134 Y------SGEGWGLCYWNGKLVRSDG-------GTMLTFHEPDGFA-LVGAVQV-KLRGQPVELINELECAN-GVIYANI 197 (268)
T ss_dssp C------SSCCCCEEEETTEEEEECS-------SSEEEEECTTTCC-EEEEEEC-EETTEECCCEEEEEEET-TEEEEEE
T ss_pred C------CCceeEEecCCCEEEEECC-------CCEEEEEcCCCCe-EEEEEEe-CCCCcccccccccEEeC-CEEEEEE
Confidence 2 2345788888889999765 3579999999842 2334433 222222111 1233334 4777522
Q ss_pred cCCCCCccCceeEEeCCCCCc-eEEEc
Q 004198 171 GNDGKRVLSDAWALDTAQKPY-VWQRL 196 (769)
Q Consensus 171 G~~~~~~~~dv~~~d~~~~~~-~W~~v 196 (769)
...+++.+.|+++... .|-.+
T Consensus 198 -----w~s~~I~vIDp~TG~V~~~Idl 219 (268)
T 3nok_A 198 -----WHSSDVLEIDPATGTVVGVIDA 219 (268)
T ss_dssp -----TTCSEEEEECTTTCBEEEEEEC
T ss_pred -----CCCCeEEEEeCCCCcEEEEEEC
Confidence 1246899999988732 34444
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=86.75 E-value=50 Score=37.95 Aligned_cols=245 Identities=8% Similarity=-0.031 Sum_probs=116.7
Q ss_pred CCcEEEEECCCCcEEEecCCCCCCc-ccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCC
Q 004198 74 TNSVHLYDVLTRKWTRIRPAGEPPS-PRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGP 150 (769)
Q Consensus 74 ~~dv~~yD~~~~~W~~l~~~g~~P~-~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p 150 (769)
...+|+.+.....|+.+........ .........+ +++.++++... .+.....++++|+.+ .+........
T Consensus 97 ~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~-~G~~~~~i~v~d~~t--g~~~~~~~~~--- 170 (710)
T 2xdw_A 97 QRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSA-SGSDWVTIKFMKVDG--AKELPDVLER--- 170 (710)
T ss_dssp SCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEE-TTCSCEEEEEEETTT--TEEEEEEEEE---
T ss_pred EEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcC-CCCceEEEEEEECCC--CCCCcccccC---
Confidence 4578888887788887643211000 0011112222 44444443321 121234799999998 4455432111
Q ss_pred CCccccEEEEECCcEEEEEecCCCC-----------CccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEE
Q 004198 151 GPRYGHVMDLVSQRYLVSVSGNDGK-----------RVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMF 219 (769)
Q Consensus 151 ~~R~~hs~~~~~~~~l~v~GG~~~~-----------~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l 219 (769)
... ...+...++..++++..+.. .....+|++++.+..-+-..+.... ..+..........+|+.
T Consensus 171 -~~~-~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~--~~~~~~~~~~~SpDg~~ 246 (710)
T 2xdw_A 171 -VKF-SCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFP--DEPKWMGGAELSDDGRY 246 (710)
T ss_dssp -ECS-CCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCT--TCTTCEEEEEECTTSCE
T ss_pred -ccc-ceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccC--CCCeEEEEEEEcCCCCE
Confidence 111 12323323344444444332 2345689999877621111221111 11222334445677766
Q ss_pred EEEcccCCCCCcccceEEEecCC------CC-ceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEE
Q 004198 220 LLCGGRDASGAPLADAYGLLMHR------NG-QWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAV 292 (769)
Q Consensus 220 ~v~GG~~~~~~~l~d~~~ld~~~------~~-~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~ 292 (769)
+++....... ..+++|.++... .. .+........ . ......--++.+|+.+.... ....+++
T Consensus 247 l~~~~~~~~~-~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~---~-~~~~~s~dg~~l~~~s~~~~------~~~~l~~ 315 (710)
T 2xdw_A 247 VLLSIREGCD-PVNRLWYCDLQQESNGITGILKWVKLIDNFE---G-EYDYVTNEGTVFTFKTNRHS------PNYRLIN 315 (710)
T ss_dssp EEEEEECSSS-SCCEEEEEEGGGSSSSSCSSCCCEEEECSSS---S-CEEEEEEETTEEEEEECTTC------TTCEEEE
T ss_pred EEEEEEccCC-CccEEEEEECcccccccCCccceEEeeCCCC---c-EEEEEeccCCEEEEEECCCC------CCCEEEE
Confidence 5555432211 146788888764 11 2333322111 1 11122224778888765322 1346999
Q ss_pred EECCCC---cEEeccCCccCCCCCCCCCCCCCccCcccccceEEEEe-CCEEEEEcCcCCCccccceEEecC
Q 004198 293 LDTAAG---VWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASI-GVRIYIYGGLKGDILLDDFLVAEN 360 (769)
Q Consensus 293 yd~~t~---~W~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~-~~~iyv~GG~~~~~~~~D~~~ld~ 360 (769)
+|+.+. .|+.+..... ...-..++.. ++++++....++ ...++++++
T Consensus 316 ~d~~~~~~~~~~~l~~~~~------------------~~~~~~~~~~~~~~lv~~~~~~g---~~~l~~~~~ 366 (710)
T 2xdw_A 316 IDFTDPEESKWKVLVPEHE------------------KDVLEWVACVRSNFLVLCYLHDV---KNTLQLHDL 366 (710)
T ss_dssp EETTSCCGGGCEEEECCCS------------------SCEEEEEEEETTTEEEEEEEETT---EEEEEEEET
T ss_pred EeCCCCCcccceeccCCCC------------------CCeEEEEEEEcCCEEEEEEEECC---EEEEEEEEC
Confidence 999876 5887654321 1111233444 667777665544 244666665
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=86.71 E-value=48 Score=37.66 Aligned_cols=83 Identities=11% Similarity=0.059 Sum_probs=47.4
Q ss_pred CCEEEEECccC---------CCCCCcCcEEEEEccCCcceEEEeeecCCCCC--CccccEEEEE---CCc--EEEEEecC
Q 004198 109 GTMVVFQGGIG---------PAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPG--PRYGHVMDLV---SQR--YLVSVSGN 172 (769)
Q Consensus 109 ~~~Iyv~GG~~---------~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~--~R~~hs~~~~---~~~--~l~v~GG~ 172 (769)
.+.||+..|.. ....+.+.++.+|+.|.+..|+.-......-- .-....++-. +++ .+++.+..
T Consensus 252 ~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~ 331 (599)
T 1w6s_A 252 TNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDR 331 (599)
T ss_dssp TTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECT
T ss_pred CCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECC
Confidence 46888876532 12344578999999998889987632111000 0011122221 221 45555544
Q ss_pred CCCCccCceeEEeCCCCCceEEEc
Q 004198 173 DGKRVLSDAWALDTAQKPYVWQRL 196 (769)
Q Consensus 173 ~~~~~~~dv~~~d~~~~~~~W~~v 196 (769)
+ ..++++|.++....|..-
T Consensus 332 ~-----G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 332 N-----GIVYTLDRTDGALVSANK 350 (599)
T ss_dssp T-----SEEEEEETTTCCEEEEEE
T ss_pred C-----cEEEEEECCCCCEeeccc
Confidence 3 358999998887788764
|
| >1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A | Back alignment and structure |
|---|
Probab=86.60 E-value=0.29 Score=55.21 Aligned_cols=69 Identities=22% Similarity=0.124 Sum_probs=40.6
Q ss_pred CEEEEccCCCCHH----------HHHHHHHHhCCCCC-CCCCcceeEEEeccccCCCCC-----hHHHHHHHHHhhhcCC
Q 004198 582 PVKVFGDLHGQFG----------DLMRLFDEYGFPST-AGDITYIDYLFLGDYVDRGQH-----SLETITLLLALKIEYP 645 (769)
Q Consensus 582 ~i~viGDiHG~~~----------~l~~~l~~~~~~~~-~~~~~~~~~vfLGD~vDrG~~-----s~e~l~ll~~lk~~~p 645 (769)
.|+.++|+||.+. .+..+++.+..... .+ +..-+|..||+++..+. ...++.+|..+.
T Consensus 10 ~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~--~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~lg---- 83 (516)
T 1hp1_A 10 TVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEG--GSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVG---- 83 (516)
T ss_dssp EEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHT--CEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHHT----
T ss_pred EEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccC--CCEEEEeCCccCCCcchhhhcCCcHHHHHHhccC----
Confidence 3889999999753 45555554321100 00 00146669999976542 235556666553
Q ss_pred CceEEecCCcch
Q 004198 646 ENVHLIRGNHEA 657 (769)
Q Consensus 646 ~~v~llrGNHE~ 657 (769)
-.++..||||.
T Consensus 84 -~d~~~~GNHEf 94 (516)
T 1hp1_A 84 -YDAMAIGNHEF 94 (516)
T ss_dssp -CCEEECCGGGG
T ss_pred -CCEEeeccccc
Confidence 23678899996
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=86.55 E-value=26 Score=36.06 Aligned_cols=116 Identities=11% Similarity=0.045 Sum_probs=54.5
Q ss_pred CEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccccceEEEE-CCEEEEECccCCCCCC
Q 004198 46 PRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHS 124 (769)
Q Consensus 46 ~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~-~~~Iyv~GG~~~~~~~ 124 (769)
.+.+++|.++....+ .-.+|.+|..+++++.+... ... ...+.+..- ++.||+.+..+. .
T Consensus 13 ~~~~~vg~y~~~~~~-------------~i~~~~~d~~~g~~~~~~~~-~~~--~p~~l~~spdg~~l~~~~~~~~---~ 73 (361)
T 3scy_A 13 ELTMLVGTYTSGNSK-------------GIYTFRFNEETGESLPLSDA-EVA--NPSYLIPSADGKFVYSVNEFSK---D 73 (361)
T ss_dssp EEEEEEEECCSSSCC-------------EEEEEEEETTTCCEEEEEEE-ECS--CCCSEEECTTSSEEEEEECCSS---T
T ss_pred ceEEEEEeccCCCCC-------------CEEEEEEeCCCCCEEEeecc-cCC--CCceEEECCCCCEEEEEEccCC---C
Confidence 355667777643321 12466667888888877543 111 111222222 346777665321 1
Q ss_pred cCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCC
Q 004198 125 TDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQ 188 (769)
Q Consensus 125 ~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~ 188 (769)
...+.+|++..++.+...+..... ....-+.++. .++.+|+....+ ..+.+|++..
T Consensus 74 ~~~v~~~~~~~~~g~~~~~~~~~~--~~~~p~~~~~-dg~~l~~~~~~~-----~~v~~~~~~~ 129 (361)
T 3scy_A 74 QAAVSAFAFDKEKGTLHLLNTQKT--MGADPCYLTT-NGKNIVTANYSG-----GSITVFPIGQ 129 (361)
T ss_dssp TCEEEEEEEETTTTEEEEEEEEEC--SSSCEEEEEE-CSSEEEEEETTT-----TEEEEEEBCT
T ss_pred CCcEEEEEEeCCCCcEEEeeEecc--CCCCcEEEEE-CCCEEEEEECCC-----CEEEEEEeCC
Confidence 234555544432244555532110 1111222323 666777765322 3577777754
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=85.98 E-value=26 Score=36.48 Aligned_cols=180 Identities=12% Similarity=0.008 Sum_probs=82.8
Q ss_pred CcEEEEECCCCcEEEecCCCCCCc-----------ccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEE
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPS-----------PRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHR 142 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~-----------~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~ 142 (769)
+.+..||+.+.+....-.....+. ...-.+++.. ++. ++.|+. ...+++||+.+......
T Consensus 171 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------~g~i~~~d~~~~~~~~~- 242 (425)
T 1r5m_A 171 NVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDK-FVIPGP------KGAIFVYQITEKTPTGK- 242 (425)
T ss_dssp CCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTE-EEEECG------GGCEEEEETTCSSCSEE-
T ss_pred CeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCE-EEEEcC------CCeEEEEEcCCCceeee-
Confidence 568888988776543322211110 0002222333 445 455553 24599999987432211
Q ss_pred eeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEE
Q 004198 143 VVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLC 222 (769)
Q Consensus 143 ~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~ 222 (769)
+. . ....-.++....+..+++.|+.++ .+.+||+.+....... .. ......+.....++ +++.
T Consensus 243 ~~----~-~~~~i~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~-~~-----~~~~i~~~~~~~~~-~l~~ 305 (425)
T 1r5m_A 243 LI----G-HHGPISVLEFNDTNKLLLSASDDG-----TLRIWHGGNGNSQNCF-YG-----HSQSIVSASWVGDD-KVIS 305 (425)
T ss_dssp EC----C-CSSCEEEEEEETTTTEEEEEETTS-----CEEEECSSSBSCSEEE-CC-----CSSCEEEEEEETTT-EEEE
T ss_pred ec----c-CCCceEEEEECCCCCEEEEEcCCC-----EEEEEECCCCccceEe-cC-----CCccEEEEEECCCC-EEEE
Confidence 11 1 111112333444445666666544 4788888765222222 11 11122344445677 6666
Q ss_pred cccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCc
Q 004198 223 GGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGV 299 (769)
Q Consensus 223 GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~ 299 (769)
|+.+ ..+..|+..+. .-....... . ..-.++++. ++.+++.|+.. ..+.+||..+..
T Consensus 306 ~~~d------~~i~i~d~~~~-~~~~~~~~~---~-~~i~~~~~s~~~~~l~~~~~d---------g~i~i~~~~~~~ 363 (425)
T 1r5m_A 306 CSMD------GSVRLWSLKQN-TLLALSIVD---G-VPIFAGRISQDGQKYAVAFMD---------GQVNVYDLKKLN 363 (425)
T ss_dssp EETT------SEEEEEETTTT-EEEEEEECT---T-CCEEEEEECTTSSEEEEEETT---------SCEEEEECHHHH
T ss_pred EeCC------CcEEEEECCCC-cEeEecccC---C-ccEEEEEEcCCCCEEEEEECC---------CeEEEEECCCCc
Confidence 6543 24566666533 111111110 0 111222232 56677777632 348888887654
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=85.55 E-value=32 Score=34.57 Aligned_cols=186 Identities=11% Similarity=0.052 Sum_probs=91.2
Q ss_pred CCcEEEEECCCCcEEEecCCCCCCcccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCC-CCC
Q 004198 74 TNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQ-GPG 151 (769)
Q Consensus 74 ~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~-~p~ 151 (769)
.+.+++||+.+++...+...+ +. .+++.. ++.+|+.. .+.+++||+.+ .+++.+..... .+.
T Consensus 34 ~~~i~~~d~~~~~~~~~~~~~-----~~-~~i~~~~dG~l~v~~--------~~~l~~~d~~~--g~~~~~~~~~~~~~~ 97 (297)
T 3g4e_A 34 AKKVCRWDSFTKQVQRVTMDA-----PV-SSVALRQSGGYVATI--------GTKFCALNWKE--QSAVVLATVDNDKKN 97 (297)
T ss_dssp TTEEEEEETTTCCEEEEECSS-----CE-EEEEEBTTSSEEEEE--------TTEEEEEETTT--TEEEEEEECCTTCSS
T ss_pred CCEEEEEECCCCcEEEEeCCC-----ce-EEEEECCCCCEEEEE--------CCeEEEEECCC--CcEEEEEecCCCCCC
Confidence 357999999988766554321 11 222222 34566642 14599999988 45666543211 122
Q ss_pred CccccEEEEECCcEEEEEecCCC------CCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCC-EEEEEcc
Q 004198 152 PRYGHVMDLVSQRYLVSVSGNDG------KRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDG-MFLLCGG 224 (769)
Q Consensus 152 ~R~~hs~~~~~~~~l~v~GG~~~------~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g-~l~v~GG 224 (769)
.|. ..+++..++.+|+..-... ......+|+++.... ...+... ...-...+...++ .+|+...
T Consensus 98 ~~~-~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~---~~~~~~~-----~~~pngi~~spdg~~lyv~~~ 168 (297)
T 3g4e_A 98 NRF-NDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH---VKKYFDQ-----VDISNGLDWSLDHKIFYYIDS 168 (297)
T ss_dssp EEE-EEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC---EEEEEEE-----ESBEEEEEECTTSCEEEEEEG
T ss_pred CCC-CCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC---EEEEeec-----cccccceEEcCCCCEEEEecC
Confidence 222 2333444556666322111 112356888987643 3332211 0111233344555 5777643
Q ss_pred cCCCCCcccceEEEecC-CCCceE----EEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCC
Q 004198 225 RDASGAPLADAYGLLMH-RNGQWE----WTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAG 298 (769)
Q Consensus 225 ~~~~~~~l~d~~~ld~~-~~~~W~----W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~ 298 (769)
. .+.++.|+.. .++... +..... ....-.++++- ++.|||.... ...|.+||++++
T Consensus 169 ~------~~~i~~~~~d~~~G~~~~~~~~~~~~~---~~~~p~g~~~d~~G~lwva~~~---------~~~v~~~d~~tG 230 (297)
T 3g4e_A 169 L------SYSVDAFDYDLQTGQISNRRSVYKLEK---EEQIPDGMCIDAEGKLWVACYN---------GGRVIRLDPVTG 230 (297)
T ss_dssp G------GTEEEEEEECTTTCCEEEEEEEEECCG---GGCEEEEEEEBTTSCEEEEEET---------TTEEEEECTTTC
T ss_pred C------CCcEEEEeccCCCCcccCcEEEEECCC---CCCCCCeeEECCCCCEEEEEcC---------CCEEEEEcCCCc
Confidence 2 2457777753 333322 222211 11122344442 6778876421 234999999877
Q ss_pred cEEe
Q 004198 299 VWLD 302 (769)
Q Consensus 299 ~W~~ 302 (769)
+...
T Consensus 231 ~~~~ 234 (297)
T 3g4e_A 231 KRLQ 234 (297)
T ss_dssp CEEE
T ss_pred eEEE
Confidence 6543
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=85.36 E-value=30 Score=34.13 Aligned_cols=189 Identities=7% Similarity=0.061 Sum_probs=93.1
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcc-cccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSP-RAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPG 151 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~-R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~ 151 (769)
+.+.+||+.......+...+..+.. ..-++++.. ++.+|+.+.. ....+++||... ..-..+. . +.
T Consensus 51 ~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~-----~~~~i~~~d~~g--~~~~~~~---~-~~ 119 (286)
T 1q7f_A 51 HRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS-----PTHQIQIYNQYG--QFVRKFG---A-TI 119 (286)
T ss_dssp TEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG-----GGCEEEEECTTS--CEEEEEC---T-TT
T ss_pred CEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC-----CCCEEEEECCCC--cEEEEec---C-cc
Confidence 4688899885544444432211111 122344442 5688887632 124589999543 2222331 1 11
Q ss_pred CccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCc
Q 004198 152 PRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAP 231 (769)
Q Consensus 152 ~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~ 231 (769)
...-+.+++..++.+|+.... .+.+++||.... ....+...+. ...-...+...++.+|+....
T Consensus 120 ~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~g~--~~~~~~~~~~---~~~p~~i~~~~~g~l~v~~~~------ 183 (286)
T 1q7f_A 120 LQHPRGVTVDNKGRIIVVECK-----VMRVIIFDQNGN--VLHKFGCSKH---LEFPNGVVVNDKQEIFISDNR------ 183 (286)
T ss_dssp CSCEEEEEECTTSCEEEEETT-----TTEEEEECTTSC--EEEEEECTTT---CSSEEEEEECSSSEEEEEEGG------
T ss_pred CCCceEEEEeCCCCEEEEECC-----CCEEEEEcCCCC--EEEEeCCCCc---cCCcEEEEECCCCCEEEEECC------
Confidence 112234444455577776542 246889997654 3333322111 111234444567888886542
Q ss_pred ccceEEEecCCCCceEEEeC-CCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEec
Q 004198 232 LADAYGLLMHRNGQWEWTLA-PGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDR 303 (769)
Q Consensus 232 l~d~~~ld~~~~~~W~W~~~-~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~ 303 (769)
-+.++.|+.... ..+... .+.. ..-.++++- ++.+||...... ..+.+||++...-..+
T Consensus 184 ~~~i~~~~~~g~--~~~~~~~~g~~---~~p~~i~~d~~G~l~v~~~~~~--------~~i~~~~~~g~~~~~~ 244 (286)
T 1q7f_A 184 AHCVKVFNYEGQ--YLRQIGGEGIT---NYPIGVGINSNGEILIADNHNN--------FNLTIFTQDGQLISAL 244 (286)
T ss_dssp GTEEEEEETTCC--EEEEESCTTTS---CSEEEEEECTTCCEEEEECSSS--------CEEEEECTTSCEEEEE
T ss_pred CCEEEEEcCCCC--EEEEEccCCcc---CCCcEEEECCCCCEEEEeCCCC--------EEEEEECCCCCEEEEE
Confidence 245777876432 222221 1110 112334443 578888764211 1589999866544443
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=85.34 E-value=19 Score=41.55 Aligned_cols=203 Identities=13% Similarity=0.046 Sum_probs=99.3
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--CC-EEEEECccCCC---------CCCcCcEEEEEccCCcceEEE
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GT-MVVFQGGIGPA---------GHSTDDLYVLDLTNDKFKWHR 142 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~~-~Iyv~GG~~~~---------~~~~~dl~~~d~~t~~~~W~~ 142 (769)
..++++|+.+++....... ... ...... ++ .||+....... ......+|++++.+...+-..
T Consensus 151 ~~i~v~d~~tg~~~~~~~~----~~~--~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~ 224 (710)
T 2xdw_A 151 VTIKFMKVDGAKELPDVLE----RVK--FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDIL 224 (710)
T ss_dssp EEEEEEETTTTEEEEEEEE----EEC--SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEE
T ss_pred EEEEEEECCCCCCCccccc----Ccc--cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceE
Confidence 3799999999988765321 111 222222 33 55554322111 122456999999874322122
Q ss_pred eeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCC------CCceEEEcCCCCCCCCcccccEEEEecC
Q 004198 143 VVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQ------KPYVWQRLNPEGDRPSARMYATASARSD 216 (769)
Q Consensus 143 ~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~------~~~~W~~v~~~~~~P~~r~~hsa~~~~~ 216 (769)
+.. ....+..........++..++++...+....+++|++|+.+ ....+..+.... ... .......+
T Consensus 225 v~~--~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~----~~~-~~~~s~dg 297 (710)
T 2xdw_A 225 CAE--FPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNF----EGE-YDYVTNEG 297 (710)
T ss_dssp EEC--CTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSS----SSC-EEEEEEET
T ss_pred Eec--cCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCC----CcE-EEEEeccC
Confidence 211 11122223333344444444444433322357899999875 322466664321 111 12233345
Q ss_pred CEEEEEcccCCCCCcccceEEEecCCCC--ceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEE
Q 004198 217 GMFLLCGGRDASGAPLADAYGLLMHRNG--QWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVL 293 (769)
Q Consensus 217 g~l~v~GG~~~~~~~l~d~~~ld~~~~~--~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~y 293 (769)
+.+|+.+..+. ....++.++..... .|+-..... +. ..-...+.. ++.+++...... ...++++
T Consensus 298 ~~l~~~s~~~~---~~~~l~~~d~~~~~~~~~~~l~~~~--~~-~~~~~~~~~~~~~lv~~~~~~g-------~~~l~~~ 364 (710)
T 2xdw_A 298 TVFTFKTNRHS---PNYRLINIDFTDPEESKWKVLVPEH--EK-DVLEWVACVRSNFLVLCYLHDV-------KNTLQLH 364 (710)
T ss_dssp TEEEEEECTTC---TTCEEEEEETTSCCGGGCEEEECCC--SS-CEEEEEEEETTTEEEEEEEETT-------EEEEEEE
T ss_pred CEEEEEECCCC---CCCEEEEEeCCCCCcccceeccCCC--CC-CeEEEEEEEcCCEEEEEEEECC-------EEEEEEE
Confidence 67777654332 23568888876442 344332211 11 112234445 777777765322 3458999
Q ss_pred ECCCCc-EEec
Q 004198 294 DTAAGV-WLDR 303 (769)
Q Consensus 294 d~~t~~-W~~~ 303 (769)
|+.+++ .+.+
T Consensus 365 ~~~~g~~~~~l 375 (710)
T 2xdw_A 365 DLATGALLKIF 375 (710)
T ss_dssp ETTTCCEEEEE
T ss_pred ECCCCCEEEec
Confidence 985554 3443
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=85.20 E-value=15 Score=42.32 Aligned_cols=244 Identities=11% Similarity=-0.014 Sum_probs=117.4
Q ss_pred CCcEEEEECCCCcEEEecCCCCCCcc-cccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCC
Q 004198 74 TNSVHLYDVLTRKWTRIRPAGEPPSP-RAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGP 150 (769)
Q Consensus 74 ~~dv~~yD~~~~~W~~l~~~g~~P~~-R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p 150 (769)
...+|+.+.....|+.+......... ........+ +++.+++.-.. .+.....++++|+.+.. .... ...+
T Consensus 93 ~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~-~G~~~~~i~v~dl~tg~--~~~~---~~~~ 166 (695)
T 2bkl_A 93 KAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKP-NAADEAVLHVIDVDSGE--WSKV---DVIE 166 (695)
T ss_dssp SCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEE-TTCSCCEEEEEETTTCC--BCSS---CCBS
T ss_pred EEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECC-CCCceEEEEEEECCCCC--CcCC---cccC
Confidence 46789999888889888643111000 011112222 44444433221 12224579999999843 3200 1222
Q ss_pred CCccccEEEEECCcEEEEEecCCCC--------CccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEE
Q 004198 151 GPRYGHVMDLVSQRYLVSVSGNDGK--------RVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLC 222 (769)
Q Consensus 151 ~~R~~hs~~~~~~~~l~v~GG~~~~--------~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~ 222 (769)
.... ...+...++..++++..+.. .....+|++++.+..-+-..+.... ..+..........+|+.+++
T Consensus 167 ~~~~-~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~--~~~~~~~~~~~SpDG~~l~~ 243 (695)
T 2bkl_A 167 GGKY-ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERT--GDPTTFLQSDLSRDGKYLFV 243 (695)
T ss_dssp CCTT-CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCC--CCTTCEEEEEECTTSCCEEE
T ss_pred cccc-cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecC--CCCEEEEEEEECCCCCEEEE
Confidence 2221 23333344455555555432 2356699999887621112222110 11223334455677766666
Q ss_pred cccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCc---
Q 004198 223 GGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGV--- 299 (769)
Q Consensus 223 GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~--- 299 (769)
...... ..+++|.++... +.+....... .. ....+..++.+|+...... ....++++|.++..
T Consensus 244 ~~~~~~--~~~~l~~~~~~~-~~~~~l~~~~----~~-~~~~~~~~g~l~~~s~~~~------~~~~l~~~d~~~~~~~~ 309 (695)
T 2bkl_A 244 YILRGW--SENDVYWKRPGE-KDFRLLVKGV----GA-KYEVHAWKDRFYVLTDEGA------PRQRVFEVDPAKPARAS 309 (695)
T ss_dssp EEEETT--TEEEEEEECTTC-SSCEEEEECS----SC-CEEEEEETTEEEEEECTTC------TTCEEEEEBTTBCSGGG
T ss_pred EEeCCC--CceEEEEEcCCC-CceEEeecCC----Cc-eEEEEecCCcEEEEECCCC------CCCEEEEEeCCCCCccC
Confidence 544331 246788776542 2333332211 11 1122234566555533211 13569999987764
Q ss_pred EEeccCCccCCCCCCCCCCCCCccCcccccceEEEEeCCEEEEEcCcCCCccccceEEecCC
Q 004198 300 WLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLDDFLVAENS 361 (769)
Q Consensus 300 W~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~~~~iyv~GG~~~~~~~~D~~~ld~~ 361 (769)
|+.+...... ... ......+++|++....++ ...+|.+++.
T Consensus 310 ~~~l~~~~~~-----------------~~l-~~~~~~~~~lv~~~~~dg---~~~l~~~~~~ 350 (695)
T 2bkl_A 310 WKEIVPEDSS-----------------ASL-LSVSIVGGHLSLEYLKDA---TSEVRVATLK 350 (695)
T ss_dssp CEEEECCCSS-----------------CEE-EEEEEETTEEEEEEEETT---EEEEEEEETT
T ss_pred CeEEecCCCC-----------------CeE-EEEEEECCEEEEEEEECC---EEEEEEEeCC
Confidence 8876543210 111 223334888888776555 3456776653
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=85.09 E-value=16 Score=37.47 Aligned_cols=199 Identities=11% Similarity=0.077 Sum_probs=84.8
Q ss_pred CcEEEEECC-CCcEEEec---CCCCCCcccc----cceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeee
Q 004198 75 NSVHLYDVL-TRKWTRIR---PAGEPPSPRA----AHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVV 145 (769)
Q Consensus 75 ~dv~~yD~~-~~~W~~l~---~~g~~P~~R~----~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~ 145 (769)
+.+..||+. +.+...+. ..+..|.+|. -++++.. ++.+|+.+.. .+.+++||+... .+...+..
T Consensus 108 ~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~------~~~v~~~~~~~~-g~~~~~~~ 180 (347)
T 3hfq_A 108 GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLG------SDKVYVYNVSDA-GQLSEQSV 180 (347)
T ss_dssp TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETT------TTEEEEEEECTT-SCEEEEEE
T ss_pred CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCC------CCEEEEEEECCC-CcEEEeee
Confidence 457778874 33444332 2232232222 1222222 3456665432 246899998832 23333321
Q ss_pred cCCCCCCccccEEEEE-CCcEEEEEecCCCCCccCceeEEeCC--CCCceEEEcCCCCCCCCc----ccccEEEEecCCE
Q 004198 146 QGQGPGPRYGHVMDLV-SQRYLVSVSGNDGKRVLSDAWALDTA--QKPYVWQRLNPEGDRPSA----RMYATASARSDGM 218 (769)
Q Consensus 146 ~g~~p~~R~~hs~~~~-~~~~l~v~GG~~~~~~~~dv~~~d~~--~~~~~W~~v~~~~~~P~~----r~~hsa~~~~~g~ 218 (769)
....+...-. .+++. +++.+|+.+..+ +.+.+|+.. +. ++..+......|.. ..........+|+
T Consensus 181 ~~~~~g~~p~-~~~~spdg~~l~v~~~~~-----~~v~v~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~ 252 (347)
T 3hfq_A 181 LTMEAGFGPR-HLVFSPDGQYAFLAGELS-----SQIASLKYDTQTG--AFTQLGIVKTIPADYTAHNGAAAIRLSHDGH 252 (347)
T ss_dssp EECCTTCCEE-EEEECTTSSEEEEEETTT-----TEEEEEEEETTTT--EEEEEEEEESSCTTCCSCCEEEEEEECTTSC
T ss_pred EEcCCCCCCc-eEEECCCCCEEEEEeCCC-----CEEEEEEecCCCC--ceEEeeeeeecCCCCCCCCcceeEEECCCCC
Confidence 0111111111 23333 344577765433 344555544 44 55443221111211 1223344456775
Q ss_pred -EEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CC-EEEEEecccCCCCcccCCCcEEEE--
Q 004198 219 -FLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GA-RLHVTGGALRGGRAIEGEAAVAVL-- 293 (769)
Q Consensus 219 -l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~-~i~V~GG~~~~~~~~~~~~~v~~y-- 293 (769)
+|+.+..+ +.+..|+...++.++....... ....-..+++- ++ .||+.+. . .+.+.+|
T Consensus 253 ~l~v~~~~~------~~v~v~~~~~~g~~~~~~~~~~--~~~~~~~~~~spdg~~l~v~~~-~--------~~~v~v~~~ 315 (347)
T 3hfq_A 253 FLYVSNRGY------NTLAVFAVTADGHLTLIQQIST--EGDFPRDFDLDPTEAFVVVVNQ-N--------TDNATLYAR 315 (347)
T ss_dssp EEEEEEETT------TEEEEEEECGGGCEEEEEEEEC--SSSCCCEEEECTTSSEEEEEET-T--------TTEEEEEEE
T ss_pred EEEEEeCCC------CEEEEEEECCCCcEEEeEEEec--CCCCcCeEEECCCCCEEEEEEc-C--------CCcEEEEEE
Confidence 66654321 3455566543433333321110 01111234443 44 4665543 1 1235555
Q ss_pred ECCCCcEEeccC
Q 004198 294 DTAAGVWLDRNG 305 (769)
Q Consensus 294 d~~t~~W~~~~~ 305 (769)
|.++++-+.+..
T Consensus 316 d~~tg~l~~~~~ 327 (347)
T 3hfq_A 316 DLTSGKLSLLQK 327 (347)
T ss_dssp CTTTCCEEEEEE
T ss_pred eCCCCeEEeccc
Confidence 778887776554
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=84.95 E-value=22 Score=40.98 Aligned_cols=109 Identities=10% Similarity=-0.014 Sum_probs=50.2
Q ss_pred ceeEEeCCC-CCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCC-C
Q 004198 180 DAWALDTAQ-KPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAP-S 257 (769)
Q Consensus 180 dv~~~d~~~-~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P-~ 257 (769)
.++++|+.+ . +-..+... .+.......... .||..++++..+.. ....+++.++..+. ............ .
T Consensus 264 ~l~~~d~~~~~--~~~~~~~~--~~~~~~~~~~~~-pDg~~l~~~~~~~~-~~~~~i~~~d~~~g-~~~~~~~~~~~~~~ 336 (741)
T 2ecf_A 264 KLGVISPAEQA--QTQWIDLG--KEQDIYLARVNW-RDPQHLSFQRQSRD-QKKLDLVEVTLASN-QQRVLAHETSPTWV 336 (741)
T ss_dssp EEEEECSSTTC--CCEEECCC--SCSSEEEEEEEE-EETTEEEEEEEETT-SSEEEEEEEETTTC-CEEEEEEEECSSCC
T ss_pred EEEEEECCCCC--ceEEecCC--CCcceEEEEEEe-CCCCEEEEEEeccc-CCeEEEEEEECCCC-ceEEEEEcCCCCcC
Confidence 788889887 6 32333211 011122233344 67665555443222 12467888887644 222111100000 0
Q ss_pred cccceEEEE-eCCEEEEEecccCCCCcccCCCcEEEEECCCCcEEecc
Q 004198 258 PRYQHAAVF-VGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRN 304 (769)
Q Consensus 258 ~R~~hs~~~-~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~ 304 (769)
... ...++ -++++++.++..+ ...+|.+|.... ++.+.
T Consensus 337 ~~~-~~~~~spdg~~~~~~~~~g-------~~~l~~~~~~~~-~~~l~ 375 (741)
T 2ecf_A 337 PLH-NSLRFLDDGSILWSSERTG-------FQHLYRIDSKGK-AAALT 375 (741)
T ss_dssp CCC-SCCEECTTSCEEEEECTTS-------SCEEEEECSSSC-EEESC
T ss_pred CcC-CceEECCCCeEEEEecCCC-------ccEEEEEcCCCC-eeeee
Confidence 011 12223 2566666654322 346889987766 55543
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=84.64 E-value=39 Score=34.77 Aligned_cols=184 Identities=14% Similarity=0.195 Sum_probs=90.5
Q ss_pred EEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCcccc
Q 004198 77 VHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGH 156 (769)
Q Consensus 77 v~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~h 156 (769)
+++-.-.-.+|+.+......+ .....+++..++.+|+.|.. ..+++ ......+|+.+......|.. -.
T Consensus 58 i~~s~DgG~tW~~~~~~~~~~-~~~~~~i~~~~~~~~~~g~~-------g~i~~--S~DgG~tW~~~~~~~~~~~~--~~ 125 (327)
T 2xbg_A 58 LMETRDGGQTWEPRTLVLDHS-DYRFNSVSFQGNEGWIVGEP-------PIMLH--TTDGGQSWSQIPLDPKLPGS--PR 125 (327)
T ss_dssp EEEESSTTSSCEECCCCCSCC-CCEEEEEEEETTEEEEEEET-------TEEEE--ESSTTSSCEECCCCTTCSSC--EE
T ss_pred EEEeCCCCCCCeECCCCCCCC-CccEEEEEecCCeEEEEECC-------CeEEE--ECCCCCCceECccccCCCCC--eE
Confidence 554322235799886432111 11223444456788887532 12333 22323579998532222322 23
Q ss_pred EEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceE
Q 004198 157 VMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAY 236 (769)
Q Consensus 157 s~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~ 236 (769)
.++...++.+|+.|.. + .+++-.-... +|+.+... .+...+.+....++.+++.|-. ..++
T Consensus 126 ~i~~~~~~~~~~~~~~-g-----~v~~S~DgG~--tW~~~~~~----~~~~~~~~~~~~~~~~~~~g~~-------G~~~ 186 (327)
T 2xbg_A 126 LIKALGNGSAEMITNV-G-----AIYRTKDSGK--NWQALVQE----AIGVMRNLNRSPSGEYVAVSSR-------GSFY 186 (327)
T ss_dssp EEEEEETTEEEEEETT-C-----CEEEESSTTS--SEEEEECS----CCCCEEEEEECTTSCEEEEETT-------SSEE
T ss_pred EEEEECCCCEEEEeCC-c-----cEEEEcCCCC--CCEEeecC----CCcceEEEEEcCCCcEEEEECC-------CcEE
Confidence 3444455577777642 1 2444322233 79998643 2233445555567777776521 2355
Q ss_pred EEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECC-CCcEEeccC
Q 004198 237 GLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTA-AGVWLDRNG 305 (769)
Q Consensus 237 ~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~-t~~W~~~~~ 305 (769)
+.......+|+-... +.+...+.+++. ++.+|+.+.. ..++..+.+ ...|+.+..
T Consensus 187 ~S~d~gG~tW~~~~~----~~~~~~~~~~~~~~g~~~~~~~~----------G~~~~s~~D~G~tW~~~~~ 243 (327)
T 2xbg_A 187 STWEPGQTAWEPHNR----TTSRRLHNMGFTPDGRLWMIVNG----------GKIAFSDPDNSENWGELLS 243 (327)
T ss_dssp EEECTTCSSCEEEEC----CSSSCEEEEEECTTSCEEEEETT----------TEEEEEETTEEEEECCCBC
T ss_pred EEeCCCCCceeECCC----CCCCccceeEECCCCCEEEEeCC----------ceEEEecCCCCCeeEeccC
Confidence 544321235654432 233344455443 5678777631 124454334 568988754
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=84.38 E-value=40 Score=34.68 Aligned_cols=176 Identities=14% Similarity=0.178 Sum_probs=86.4
Q ss_pred CCcEEEecCCCCCCcccccceEEE-ECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEEC
Q 004198 84 TRKWTRIRPAGEPPSPRAAHAAAA-VGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVS 162 (769)
Q Consensus 84 ~~~W~~l~~~g~~P~~R~~hs~~~-~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~ 162 (769)
-.+|+++......| -..+.++. -++.+|+.|.. + .+|+- .....+|+++.. +.+..-+.+....
T Consensus 108 G~tW~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~---g----~v~~S--~DgG~tW~~~~~----~~~~~~~~~~~~~ 172 (327)
T 2xbg_A 108 GQSWSQIPLDPKLP--GSPRLIKALGNGSAEMITNV---G----AIYRT--KDSGKNWQALVQ----EAIGVMRNLNRSP 172 (327)
T ss_dssp TSSCEECCCCTTCS--SCEEEEEEEETTEEEEEETT---C----CEEEE--SSTTSSEEEEEC----SCCCCEEEEEECT
T ss_pred CCCceECccccCCC--CCeEEEEEECCCCEEEEeCC---c----cEEEE--cCCCCCCEEeec----CCCcceEEEEEcC
Confidence 46799886432112 11233433 35688887642 1 24442 222356999853 2222334554445
Q ss_pred CcEEEEEecCCCCCccCceeEEeCC-CCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecC
Q 004198 163 QRYLVSVSGNDGKRVLSDAWALDTA-QKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMH 241 (769)
Q Consensus 163 ~~~l~v~GG~~~~~~~~dv~~~d~~-~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~ 241 (769)
++.++++|. . ..+++-+-. .. .|+.+.. +.....+.+....++.+|+.+.. + .++....+
T Consensus 173 ~~~~~~~g~-~-----G~~~~S~d~gG~--tW~~~~~----~~~~~~~~~~~~~~g~~~~~~~~---G----~~~~s~~D 233 (327)
T 2xbg_A 173 SGEYVAVSS-R-----GSFYSTWEPGQT--AWEPHNR----TTSRRLHNMGFTPDGRLWMIVNG---G----KIAFSDPD 233 (327)
T ss_dssp TSCEEEEET-T-----SSEEEEECTTCS--SCEEEEC----CSSSCEEEEEECTTSCEEEEETT---T----EEEEEETT
T ss_pred CCcEEEEEC-C-----CcEEEEeCCCCC--ceeECCC----CCCCccceeEECCCCCEEEEeCC---c----eEEEecCC
Confidence 556666653 2 234443221 34 7988853 23444455555567788877631 1 13333222
Q ss_pred CCCceEEEeCCCC-CCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccC
Q 004198 242 RNGQWEWTLAPGV-APSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNG 305 (769)
Q Consensus 242 ~~~~W~W~~~~~~-~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~ 305 (769)
+--+|...... .+.....++.+.. ++.+|+.|+. ..+++-.=....|+.+..
T Consensus 234 --~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~----------g~i~~S~DgG~tW~~~~~ 287 (327)
T 2xbg_A 234 --NSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGA----------GALLCSQDGGQTWQQDVD 287 (327)
T ss_dssp --EEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEEST----------TCEEEESSTTSSCEECGG
T ss_pred --CCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCC----------CeEEEeCCCCcccEEcCc
Confidence 12256655322 1221122344443 5778888761 124333233578998764
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=84.25 E-value=8.7 Score=40.05 Aligned_cols=150 Identities=11% Similarity=0.039 Sum_probs=73.0
Q ss_pred CCcEEEEECCCCcEEEecCCCCCCcccccceEEEE-CC-EEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCC
Q 004198 74 TNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GT-MVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPG 151 (769)
Q Consensus 74 ~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~-~~-~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~ 151 (769)
...++.+|+.+++...+... .....+....- ++ .|++... +........+|++|+.+ .++..+.. ..
T Consensus 167 ~~~l~~~d~~~g~~~~~~~~----~~~~~~~~~sp~dg~~l~~~~~-~~~~~~~~~l~~~d~~~--~~~~~l~~----~~ 235 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQD----TAWLGHPIYRPFDDSTVGFCHE-GPHDLVDARMWLVNEDG--SNVRKIKE----HA 235 (396)
T ss_dssp CEEEEEEETTTCCEEEEEEE----SSCEEEEEEETTEEEEEEEEEC-SCSSSCSCCCEEEETTS--CCCEESSC----CC
T ss_pred cceEEEEECCCCcEEeeccC----CcccccceECCCCCCEEEEEec-CCCCCCCceEEEEECCC--CceeEeec----cC
Confidence 45799999999888777532 11122222222 23 3444432 22222235799999877 44555521 11
Q ss_pred Cc-cccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEec-CCEEEEEcccCCC-
Q 004198 152 PR-YGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARS-DGMFLLCGGRDAS- 228 (769)
Q Consensus 152 ~R-~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~-~g~l~v~GG~~~~- 228 (769)
+. .-.......++..+++...........++++|+.+. +...+... + . +...... ++.++++++....
T Consensus 236 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g--~~~~l~~~---~--~--~~~~~s~~dg~~l~~~~~~~p~ 306 (396)
T 3c5m_A 236 EGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETL--ENEEVMVM---P--P--CSHLMSNFDGSLMVGDGCDAPV 306 (396)
T ss_dssp TTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTC--CEEEEEEC---C--S--EEEEEECSSSSEEEEEECCC--
T ss_pred CCccccceEECCCCCEEEEEecCCCCccceEEEEECCCC--CeEEeeeC---C--C--CCCCccCCCCceEEEecCCcce
Confidence 11 111222333333333333322222234999999877 55554322 1 1 1133345 7777666543210
Q ss_pred ---------CCcccceEEEecCCC
Q 004198 229 ---------GAPLADAYGLLMHRN 243 (769)
Q Consensus 229 ---------~~~l~d~~~ld~~~~ 243 (769)
...-..++.++....
T Consensus 307 ~~~~~~~~~~~~~~~i~~~d~~~~ 330 (396)
T 3c5m_A 307 DVADADSYNIENDPFLYVLNTKAK 330 (396)
T ss_dssp --------CCCCCCEEEEEETTTT
T ss_pred eeccccccccCCCCcEEEEecccC
Confidence 011356888887643
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=83.76 E-value=30 Score=35.81 Aligned_cols=106 Identities=12% Similarity=0.101 Sum_probs=50.4
Q ss_pred cCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEEC-CcEEEEEecCCC-CCccCceeEEeCCCCCceEEEcCCCCCC
Q 004198 125 TDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVS-QRYLVSVSGNDG-KRVLSDAWALDTAQKPYVWQRLNPEGDR 202 (769)
Q Consensus 125 ~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~-~~~l~v~GG~~~-~~~~~dv~~~d~~~~~~~W~~v~~~~~~ 202 (769)
...++++|+.+. +-..+... .....+.. ... ++..+++..... ......+|.+|..+. ....+...
T Consensus 167 ~~~l~~~d~~~g--~~~~l~~~----~~~~~~~~-~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~--~~~~l~~~--- 234 (388)
T 3pe7_A 167 CCRLMRVDLKTG--ESTVILQE----NQWLGHPI-YRPYDDSTVAFCHEGPHDLVDARMWLINEDGT--NMRKVKTH--- 234 (388)
T ss_dssp CEEEEEEETTTC--CEEEEEEE----SSCEEEEE-EETTEEEEEEEEECSCTTTSSCSEEEEETTSC--CCEESCCC---
T ss_pred cceEEEEECCCC--ceEEeecC----CccccccE-ECCCCCCEEEEEEecCCCCCcceEEEEeCCCC--ceEEeeeC---
Confidence 367999999884 34444211 11222222 333 344444433322 223568999998776 44555432
Q ss_pred CCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCC
Q 004198 203 PSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRN 243 (769)
Q Consensus 203 P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~ 243 (769)
.............+|..+++...... .....++.++..+.
T Consensus 235 ~~~~~~~~~~~spdg~~l~~~~~~~~-~~~~~l~~~d~~~g 274 (388)
T 3pe7_A 235 AEGESCTHEFWVPDGSALVYVSYLKG-SPDRFIYSADPETL 274 (388)
T ss_dssp CTTEEEEEEEECTTSSCEEEEEEETT-CCCEEEEEECTTTC
T ss_pred CCCcccccceECCCCCEEEEEecCCC-CCcceEEEEecCCC
Confidence 11111122234467654433322211 11124888887654
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=83.73 E-value=22 Score=37.30 Aligned_cols=95 Identities=12% Similarity=-0.007 Sum_probs=47.5
Q ss_pred CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCC
Q 004198 109 GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQ 188 (769)
Q Consensus 109 ~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~ 188 (769)
++..++.|+. ...+.+||+.+. +-.... ......-.+++...++.+++.|+.++ .+.+||+.+
T Consensus 108 ~~~~l~~~~~------dg~i~iwd~~~~--~~~~~~----~~h~~~v~~~~~~~~~~~l~s~s~d~-----~i~iwd~~~ 170 (420)
T 3vl1_A 108 QMRRFILGTT------EGDIKVLDSNFN--LQREID----QAHVSEITKLKFFPSGEALISSSQDM-----QLKIWSVKD 170 (420)
T ss_dssp SSCEEEEEET------TSCEEEECTTSC--EEEEET----TSSSSCEEEEEECTTSSEEEEEETTS-----EEEEEETTT
T ss_pred CCCEEEEEEC------CCCEEEEeCCCc--ceeeec----ccccCccEEEEECCCCCEEEEEeCCC-----eEEEEeCCC
Confidence 4556666654 235899998873 222221 11111222333444445667777554 488888876
Q ss_pred CCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccC
Q 004198 189 KPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRD 226 (769)
Q Consensus 189 ~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~ 226 (769)
..... .+.. ....-.+.....++.+++.|+.+
T Consensus 171 ~~~~~-~~~~-----h~~~v~~~~~~~~~~~l~s~~~d 202 (420)
T 3vl1_A 171 GSNPR-TLIG-----HRATVTDIAIIDRGRNVLSASLD 202 (420)
T ss_dssp CCCCE-EEEC-----CSSCEEEEEEETTTTEEEEEETT
T ss_pred CcCce-EEcC-----CCCcEEEEEEcCCCCEEEEEcCC
Confidence 52221 1111 11112233444677777777654
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=83.40 E-value=35 Score=38.62 Aligned_cols=201 Identities=14% Similarity=0.060 Sum_probs=101.8
Q ss_pred CcEEEEECCC------CcEEEec-CCCCCCcccccceEEEECC-EEEEECccCCCCC-CcCcEEEEEcc-CCc-ceEEEe
Q 004198 75 NSVHLYDVLT------RKWTRIR-PAGEPPSPRAAHAAAAVGT-MVVFQGGIGPAGH-STDDLYVLDLT-NDK-FKWHRV 143 (769)
Q Consensus 75 ~dv~~yD~~~------~~W~~l~-~~g~~P~~R~~hs~~~~~~-~Iyv~GG~~~~~~-~~~dl~~~d~~-t~~-~~W~~~ 143 (769)
.+++.+|+.+ .+.+.+. .. + ......+..-++ .|++......... ...++|++|+. +.. .+..++
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~---~-~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l 236 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDA---H-RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTL 236 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSC---S-SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEE
T ss_pred eEEEEEECCCCccccCCceeEEEecC---C-CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEe
Confidence 5788999888 6766665 32 1 111111222234 5555443221111 23579999998 431 134444
Q ss_pred eecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCC---CCccc-ccEEEEecCCEE
Q 004198 144 VVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDR---PSARM-YATASARSDGMF 219 (769)
Q Consensus 144 ~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~---P~~r~-~hsa~~~~~g~l 219 (769)
... . ...-.......++.+|+.+..++ ...+|.+|+.+. ++..+...... |.-.. ..+.....++.+
T Consensus 237 ~~~---~-~~~~~~~~~spdg~l~~~~~~~~---~~~l~~~~~~~~--~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~ 307 (662)
T 3azo_A 237 LGG---P-EEAIAQAEWAPDGSLIVATDRTG---WWNLHRVDPATG--AATQLCRREEEFAGPLWTPGMRWFAPLANGLI 307 (662)
T ss_dssp EEE---T-TBCEEEEEECTTSCEEEEECTTS---SCEEEEECTTTC--CEEESSCCSSBSSCCCCSTTCCSEEECTTSCE
T ss_pred CCC---C-CceEcceEECCCCeEEEEECCCC---CeEEEEEECCCC--ceeecccccccccCccccccCceEeEeCCCEE
Confidence 321 0 11112332333445666555443 247999998777 78777543111 11000 112333356777
Q ss_pred EEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEE-EEeCCEEEEEecccCCCCcccCCCcEEEEECCCC
Q 004198 220 LLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAA-VFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAG 298 (769)
Q Consensus 220 ~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~-~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~ 298 (769)
++.+.. . ...+|.++.... ....+... .... ... ..-++.+++..+... ....+|.+|..++
T Consensus 308 ~~~~~~-~----~~~l~~~d~~~~---~~~~l~~~--~~~~-~~~~s~~~~~~~~~~~~~~------~~~~i~~~d~~~g 370 (662)
T 3azo_A 308 AVVHGK-G----AAVLGILDPESG---ELVDAAGP--WTEW-AATLTVSGTRAVGVAASPR------TAYEVVELDTVTG 370 (662)
T ss_dssp EEEEBS-S----SCEEEEEETTTT---EEEECCSS--CCEE-EEEEEEETTEEEEEEEETT------EEEEEEEEETTTC
T ss_pred EEEEEc-C----ccEEEEEECCCC---cEEEecCC--CCeE-EEEEecCCCEEEEEEcCCC------CCCEEEEEECCCC
Confidence 666543 2 357888887644 33444322 1111 222 344666666654322 1346899999998
Q ss_pred cEEeccC
Q 004198 299 VWLDRNG 305 (769)
Q Consensus 299 ~W~~~~~ 305 (769)
+.+.+..
T Consensus 371 ~~~~l~~ 377 (662)
T 3azo_A 371 RARTIGA 377 (662)
T ss_dssp CEEEEES
T ss_pred ceEEeec
Confidence 8877644
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=83.24 E-value=40 Score=38.11 Aligned_cols=206 Identities=13% Similarity=0.004 Sum_probs=96.0
Q ss_pred CcEEEEECC--C-CcEEEecCCCCC-CcccccceEEEECC-EEEEECccC---CCCCCcCcEEEEEccC------CcceE
Q 004198 75 NSVHLYDVL--T-RKWTRIRPAGEP-PSPRAAHAAAAVGT-MVVFQGGIG---PAGHSTDDLYVLDLTN------DKFKW 140 (769)
Q Consensus 75 ~dv~~yD~~--~-~~W~~l~~~g~~-P~~R~~hs~~~~~~-~Iyv~GG~~---~~~~~~~dl~~~d~~t------~~~~W 140 (769)
..+|.+|.. . ....+++..... ...+....+..-++ .|++..... .......++|++|+.+ .. .
T Consensus 102 ~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~ 179 (662)
T 3azo_A 102 QRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA--V 179 (662)
T ss_dssp CCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG--S
T ss_pred CeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc--e
Confidence 468888876 3 566666542100 01122222222344 555443210 1112346799999877 33 3
Q ss_pred EEeeecCCCCCCccccEEEEECCcEEEEEecCCCCC---ccCceeEEeCC-CCCc-eEEEcCCCCCCCCcccccEEEEec
Q 004198 141 HRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKR---VLSDAWALDTA-QKPY-VWQRLNPEGDRPSARMYATASARS 215 (769)
Q Consensus 141 ~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~---~~~dv~~~d~~-~~~~-~W~~v~~~~~~P~~r~~hsa~~~~ 215 (769)
..+.. .............++..+++...+... ...++|++|+. +... +...+... ............
T Consensus 180 ~~l~~----~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~----~~~~~~~~~~sp 251 (662)
T 3azo_A 180 RELSD----DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG----PEEAIAQAEWAP 251 (662)
T ss_dssp EESSC----SCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE----TTBCEEEEEECT
T ss_pred eEEEe----cCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC----CCceEcceEECC
Confidence 33310 111122222233333444444433211 13579999998 4410 22333211 011222333456
Q ss_pred CCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCC-----CCccc-ceEEEEe-CCEEEEEecccCCCCcccCCC
Q 004198 216 DGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVA-----PSPRY-QHAAVFV-GARLHVTGGALRGGRAIEGEA 288 (769)
Q Consensus 216 ~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~-----P~~R~-~hs~~~~-~~~i~V~GG~~~~~~~~~~~~ 288 (769)
||.+|+.+..++ ...+|.++.... ++..+.... |.-.. ....++. ++++++.+.. + ..
T Consensus 252 dg~l~~~~~~~~----~~~l~~~~~~~~---~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~-------~~ 316 (662)
T 3azo_A 252 DGSLIVATDRTG----WWNLHRVDPATG---AATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-G-------AA 316 (662)
T ss_dssp TSCEEEEECTTS----SCEEEEECTTTC---CEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-S-------SC
T ss_pred CCeEEEEECCCC----CeEEEEEECCCC---ceeecccccccccCccccccCceEeEeCCCEEEEEEEc-C-------cc
Confidence 787776654432 246888887533 333332211 00000 1234444 6777776653 2 34
Q ss_pred cEEEEECCCCcEEeccC
Q 004198 289 AVAVLDTAAGVWLDRNG 305 (769)
Q Consensus 289 ~v~~yd~~t~~W~~~~~ 305 (769)
.+|.+|.++++.+.+..
T Consensus 317 ~l~~~d~~~~~~~~l~~ 333 (662)
T 3azo_A 317 VLGILDPESGELVDAAG 333 (662)
T ss_dssp EEEEEETTTTEEEECCS
T ss_pred EEEEEECCCCcEEEecC
Confidence 68999998888776643
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=82.99 E-value=41 Score=33.72 Aligned_cols=196 Identities=11% Similarity=0.040 Sum_probs=86.4
Q ss_pred CcEEEEECC--CCcEEEecCCCCCCcccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCC
Q 004198 75 NSVHLYDVL--TRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGP 150 (769)
Q Consensus 75 ~dv~~yD~~--~~~W~~l~~~g~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p 150 (769)
+.+.+||+. +++++.+..... ...-..++.. ++.+|+.+.. ...+.+||+.+. .....+.....
T Consensus 60 ~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~~~~~~------~~~i~~~d~~~~-~~~~~~~~~~~-- 127 (343)
T 1ri6_A 60 FRVLAYRIAPDDGALTFAAESAL---PGSLTHISTDHQGQFVFVGSYN------AGNVSVTRLEDG-LPVGVVDVVEG-- 127 (343)
T ss_dssp TEEEEEEECTTTCCEEEEEEEEC---SSCCSEEEECTTSSEEEEEETT------TTEEEEEEEETT-EEEEEEEEECC--
T ss_pred CeEEEEEecCCCCceeecccccc---CCCCcEEEEcCCCCEEEEEecC------CCeEEEEECCCC-ccccccccccC--
Confidence 457777776 778876643211 1111222222 3467665532 245888888521 12222221111
Q ss_pred CCccccEEEEE-CCcEEEEEecCCCCCccCceeEEeCCC-CCceEEEcC--CCCCCCCcccccEEEEecCCE-EEEEccc
Q 004198 151 GPRYGHVMDLV-SQRYLVSVSGNDGKRVLSDAWALDTAQ-KPYVWQRLN--PEGDRPSARMYATASARSDGM-FLLCGGR 225 (769)
Q Consensus 151 ~~R~~hs~~~~-~~~~l~v~GG~~~~~~~~dv~~~d~~~-~~~~W~~v~--~~~~~P~~r~~hsa~~~~~g~-l~v~GG~ 225 (769)
...-+.++.. .++.+|+.+..+ ..+.+||+.+ . +...+. ... .+....-..+....++. +|+.+..
T Consensus 128 -~~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~pdg~~l~~~~~~ 198 (343)
T 1ri6_A 128 -LDGCHSANISPDNRTLWVPALKQ-----DRICLFTVSDDG--HLVAQDPAEVT-TVEGAGPRHMVFHPNEQYAYCVNEL 198 (343)
T ss_dssp -CTTBCCCEECTTSSEEEEEEGGG-----TEEEEEEECTTS--CEEEEEEEEEE-CSTTCCEEEEEECTTSSEEEEEETT
T ss_pred -CCCceEEEECCCCCEEEEecCCC-----CEEEEEEecCCC--ceeeecccccc-cCCCCCcceEEECCCCCEEEEEeCC
Confidence 1112333333 334676655322 3588888876 4 443221 000 01111112334445664 6665432
Q ss_pred CCCCCcccceEEEecCC-CCceEEEeCCCCCCC----cccceEEEEe--CCEEEEEecccCCCCcccCCCcEEEEECC--
Q 004198 226 DASGAPLADAYGLLMHR-NGQWEWTLAPGVAPS----PRYQHAAVFV--GARLHVTGGALRGGRAIEGEAAVAVLDTA-- 296 (769)
Q Consensus 226 ~~~~~~l~d~~~ld~~~-~~~W~W~~~~~~~P~----~R~~hs~~~~--~~~i~V~GG~~~~~~~~~~~~~v~~yd~~-- 296 (769)
+ +.+..++... ++.+.........|. ......+++. +..+|+.+.. ...+.+||+.
T Consensus 199 ~------~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~---------~~~i~v~d~~~~ 263 (343)
T 1ri6_A 199 N------SSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRT---------ASLITVFSVSED 263 (343)
T ss_dssp T------TEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETT---------TTEEEEEEECTT
T ss_pred C------CEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecC---------CCEEEEEEEcCC
Confidence 1 3456666542 233322211111111 1111233333 3466665431 2357888887
Q ss_pred CCcEEeccCC
Q 004198 297 AGVWLDRNGL 306 (769)
Q Consensus 297 t~~W~~~~~~ 306 (769)
++.++.+...
T Consensus 264 ~~~~~~~~~~ 273 (343)
T 1ri6_A 264 GSVLSKEGFQ 273 (343)
T ss_dssp SCCEEEEEEE
T ss_pred CCceEEeeee
Confidence 5667666554
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=82.97 E-value=46 Score=34.29 Aligned_cols=113 Identities=5% Similarity=-0.069 Sum_probs=52.1
Q ss_pred cCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEec-CCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCC
Q 004198 178 LSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARS-DGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAP 256 (769)
Q Consensus 178 ~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~-~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P 256 (769)
...++.+|+.+. +...+... ........... ++..+++............+|.++.... .+..+....+
T Consensus 167 ~~~l~~~d~~~g--~~~~~~~~-----~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~---~~~~l~~~~~ 236 (396)
T 3c5m_A 167 TCRLIKVDIETG--ELEVIHQD-----TAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGS---NVRKIKEHAE 236 (396)
T ss_dssp CEEEEEEETTTC--CEEEEEEE-----SSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSC---CCEESSCCCT
T ss_pred cceEEEEECCCC--cEEeeccC-----CcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCC---ceeEeeccCC
Confidence 357899999887 55554321 11122233334 4543333322211112357888887643 2233322111
Q ss_pred CcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccC
Q 004198 257 SPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNG 305 (769)
Q Consensus 257 ~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~ 305 (769)
.... ...++. +++.+++.....+.. ...++++|+.+++.+.+..
T Consensus 237 ~~~~-~~~~~spdg~~l~~~~~~~~~~----~~~l~~~d~~~g~~~~l~~ 281 (396)
T 3c5m_A 237 GESC-THEFWIPDGSAMAYVSYFKGQT----DRVIYKANPETLENEEVMV 281 (396)
T ss_dssp TEEE-EEEEECTTSSCEEEEEEETTTC----CEEEEEECTTTCCEEEEEE
T ss_pred Cccc-cceEECCCCCEEEEEecCCCCc----cceEEEEECCCCCeEEeee
Confidence 1111 122222 455444433222111 2349999999887766543
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=82.56 E-value=12 Score=43.76 Aligned_cols=195 Identities=9% Similarity=0.082 Sum_probs=90.7
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--C--CEEEEECccCCCCCCcCcEEEEEccCCcceE-EEeeecCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--G--TMVVFQGGIGPAGHSTDDLYVLDLTNDKFKW-HRVVVQGQG 149 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~--~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W-~~~~~~g~~ 149 (769)
+.+.++|+.+++|..+..... ....-.++.+ + +.+++.|+. ...+.+||+.+....- ..+. + .
T Consensus 77 g~I~vwd~~~~~~~~~~~~~~---h~~~V~~v~~sp~~~~~~l~sgs~------dg~I~vwdl~~~~~~~~~~~~--~-~ 144 (753)
T 3jro_A 77 GKVLIWKEENGRWSQIAVHAV---HSASVNSVQWAPHEYGPLLLVASS------DGKVSVVEFKENGTTSPIIID--A-H 144 (753)
T ss_dssp SCEEEEEEETTEEEEEEEECC---CSSCEEEEEECCGGGCSEEEEEET------TSEEEEEECCSSSCCCCEEEE--C-C
T ss_pred CeEEEEECCCCcccccccccC---CCCCeEEEEECCCCCCCEEEEEeC------CCcEEEEEeecCCCcceeEee--c-C
Confidence 568889999998876654311 1111222222 2 455666653 2358888887642111 1110 1 1
Q ss_pred CCCccccEEEEEC-------------CcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecC
Q 004198 150 PGPRYGHVMDLVS-------------QRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSD 216 (769)
Q Consensus 150 p~~R~~hs~~~~~-------------~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~ 216 (769)
+.+ -.++.... ++.+++.|+.++ .+.+||+.+..-.+..+..... ....-.+.....+
T Consensus 145 ~~~--v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg-----~I~iwd~~~~~~~~~~~~~~~~--h~~~V~~l~~sp~ 215 (753)
T 3jro_A 145 AIG--VNSASWAPATIEEDGEHNGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEG--HSDWVRDVAWSPT 215 (753)
T ss_dssp SSC--EEEEEECCCC---------CGGGCCEEEEETTS-----CEEEEEEETTTTEEEEEEEECC--CSSCEEEEEECCC
T ss_pred CCc--eEEEEecCcccccccccccCCCCCEEEEEECCC-----eEEEEeccCCcccceeeeeecC--CCCcEEEEEeccC
Confidence 111 11111111 246677777655 3677776554334444332210 1112233444466
Q ss_pred ---CEEEEEcccCCCCCcccceEEEecCCCC-ceEEEeCCCCCCCcccceEEEE-eCCEEEEEecccCCCCcccCCCcEE
Q 004198 217 ---GMFLLCGGRDASGAPLADAYGLLMHRNG-QWEWTLAPGVAPSPRYQHAAVF-VGARLHVTGGALRGGRAIEGEAAVA 291 (769)
Q Consensus 217 ---g~l~v~GG~~~~~~~l~d~~~ld~~~~~-~W~W~~~~~~~P~~R~~hs~~~-~~~~i~V~GG~~~~~~~~~~~~~v~ 291 (769)
+.+++.||.++. +..++..... .+........ .....-.++++ -++..++.||.. ..+.
T Consensus 216 ~~~~~~l~s~s~Dg~------I~iwd~~~~~~~~~~~~~~~~-~~~~~v~~l~~spdg~~l~s~s~D---------g~I~ 279 (753)
T 3jro_A 216 VLLRSYLASVSQDRT------CIIWTQDNEQGPWKKTLLKEE-KFPDVLWRASWSLSGNVLALSGGD---------NKVT 279 (753)
T ss_dssp CSSSEEEEEEESSSC------EEEEEESSSSSCCBCCBSSSS-CCSSCCCCEEECTTTCCEEEECSS---------SCEE
T ss_pred CCCCCEEEEEecCCE------EEEecCCCCCCcceeEEeccC-CCCCceEEEEEcCCCCEEEEEcCC---------CEEE
Confidence 788888886532 4444443320 1110111111 11111123333 266777777742 3478
Q ss_pred EEECCC-CcEEeccCC
Q 004198 292 VLDTAA-GVWLDRNGL 306 (769)
Q Consensus 292 ~yd~~t-~~W~~~~~~ 306 (769)
+||..+ ..|......
T Consensus 280 vwd~~~~~~~~~~~~~ 295 (753)
T 3jro_A 280 LWKENLEGKWEPAGEV 295 (753)
T ss_dssp CCBCCSSSCCBCCCCB
T ss_pred EEecCCCCCccccccc
Confidence 888874 567665554
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=82.08 E-value=36 Score=34.18 Aligned_cols=18 Identities=11% Similarity=0.161 Sum_probs=12.9
Q ss_pred EEEEECCCCcEEeccCCc
Q 004198 290 VAVLDTAAGVWLDRNGLV 307 (769)
Q Consensus 290 v~~yd~~t~~W~~~~~~~ 307 (769)
+|.+|+++++++.+...+
T Consensus 303 v~~~d~~~g~~~~~~~~~ 320 (343)
T 1ri6_A 303 VYEIVGEQGLLHEKGRYA 320 (343)
T ss_dssp EEEEETTTTEEEEEEEEE
T ss_pred EEEEcCCCceeeEccccc
Confidence 555588888888876653
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=82.08 E-value=47 Score=33.78 Aligned_cols=149 Identities=12% Similarity=0.133 Sum_probs=74.6
Q ss_pred CEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCC
Q 004198 110 TMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQK 189 (769)
Q Consensus 110 ~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~ 189 (769)
+.+++.|+. ...+.++|+.+.. -......+ +. .-.+++...++.+++.|+.++ .+.+||..+.
T Consensus 92 ~~~l~s~s~------D~~i~lWd~~~~~--~~~~~~~~--~~--~~~~~~~spdg~~l~~g~~dg-----~v~i~~~~~~ 154 (321)
T 3ow8_A 92 LPIAASSSL------DAHIRLWDLENGK--QIKSIDAG--PV--DAWTLAFSPDSQYLATGTHVG-----KVNIFGVESG 154 (321)
T ss_dssp SSEEEEEET------TSEEEEEETTTTE--EEEEEECC--TT--CCCCEEECTTSSEEEEECTTS-----EEEEEETTTC
T ss_pred CCEEEEEeC------CCcEEEEECCCCC--EEEEEeCC--Cc--cEEEEEECCCCCEEEEEcCCC-----cEEEEEcCCC
Confidence 345555553 2458899998843 22221111 11 112344444556677776543 4778888776
Q ss_pred CceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-C
Q 004198 190 PYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-G 268 (769)
Q Consensus 190 ~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~ 268 (769)
...+.... ......+.....++.+++.|+.++ .+..+|..+. .-.. ...+. .... .++++. +
T Consensus 155 ~~~~~~~~------~~~~v~~~~~spdg~~lasg~~dg------~i~iwd~~~~-~~~~-~~~~h--~~~v-~~l~~spd 217 (321)
T 3ow8_A 155 KKEYSLDT------RGKFILSIAYSPDGKYLASGAIDG------IINIFDIATG-KLLH-TLEGH--AMPI-RSLTFSPD 217 (321)
T ss_dssp SEEEEEEC------SSSCEEEEEECTTSSEEEEEETTS------CEEEEETTTT-EEEE-EECCC--SSCC-CEEEECTT
T ss_pred ceeEEecC------CCceEEEEEECCCCCEEEEEcCCC------eEEEEECCCC-cEEE-EEccc--CCce-eEEEEcCC
Confidence 32332211 111223344457788888887643 3556666543 1111 11111 0011 123332 6
Q ss_pred CEEEEEecccCCCCcccCCCcEEEEECCCCcEE
Q 004198 269 ARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWL 301 (769)
Q Consensus 269 ~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~ 301 (769)
+.+++.|+.. ..+.+||..+....
T Consensus 218 ~~~l~s~s~d---------g~i~iwd~~~~~~~ 241 (321)
T 3ow8_A 218 SQLLVTASDD---------GYIKIYDVQHANLA 241 (321)
T ss_dssp SCEEEEECTT---------SCEEEEETTTCCEE
T ss_pred CCEEEEEcCC---------CeEEEEECCCccee
Confidence 6777777642 34889998776543
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=81.97 E-value=50 Score=34.03 Aligned_cols=201 Identities=11% Similarity=-0.013 Sum_probs=94.0
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEECC-EEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGT-MVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPR 153 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~-~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R 153 (769)
.++|.+|+.+.+-..+.... .......+..-++ .|++... ...++++|+.+.. -..+. ..+...
T Consensus 60 ~~l~~~d~~~g~~~~lt~~~---~~~~~~~~~spdg~~l~~~~~-------~~~l~~~d~~~g~--~~~~~---~~~~~~ 124 (388)
T 3pe7_A 60 WNYYLLDLNTQVATQLTEGR---GDNTFGGFLSPDDDALFYVKD-------GRNLMRVDLATLE--ENVVY---QVPAEW 124 (388)
T ss_dssp CEEEEEETTTCEEEECCCSS---CBCSSSCEECTTSSEEEEEET-------TTEEEEEETTTCC--EEEEE---ECCTTE
T ss_pred ceEEEEeCCCCceEEeeeCC---CCCccceEEcCCCCEEEEEeC-------CCeEEEEECCCCc--ceeee---echhhc
Confidence 47999999999888776431 1111112222234 5555442 1469999998843 33332 222222
Q ss_pred cccE-EEEE-CCcEEEEEec--CC--------------CCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEec
Q 004198 154 YGHV-MDLV-SQRYLVSVSG--ND--------------GKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARS 215 (769)
Q Consensus 154 ~~hs-~~~~-~~~~l~v~GG--~~--------------~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~ 215 (769)
.... .+.. ++..++.+-- .+ .......++.+|+.+. +-..+... .... .......
T Consensus 125 ~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g--~~~~l~~~----~~~~-~~~~~sp 197 (388)
T 3pe7_A 125 VGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTG--ESTVILQE----NQWL-GHPIYRP 197 (388)
T ss_dssp EEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTC--CEEEEEEE----SSCE-EEEEEET
T ss_pred ccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCC--ceEEeecC----Cccc-cccEECC
Confidence 2111 1112 2223322110 00 0112367999999887 43444321 1122 2333456
Q ss_pred -CCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCE-EEEEecccCCCCcccCCCcEEE
Q 004198 216 -DGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GAR-LHVTGGALRGGRAIEGEAAVAV 292 (769)
Q Consensus 216 -~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~-i~V~GG~~~~~~~~~~~~~v~~ 292 (769)
++..+++............+|.++.... ....+.......... ..+.. +++ |+......+ .. ...+++
T Consensus 198 ~dg~~l~~~~~~~~~~~~~~l~~~d~~~~---~~~~l~~~~~~~~~~-~~~~spdg~~l~~~~~~~~-~~----~~~l~~ 268 (388)
T 3pe7_A 198 YDDSTVAFCHEGPHDLVDARMWLINEDGT---NMRKVKTHAEGESCT-HEFWVPDGSALVYVSYLKG-SP----DRFIYS 268 (388)
T ss_dssp TEEEEEEEEECSCTTTSSCSEEEEETTSC---CCEESCCCCTTEEEE-EEEECTTSSCEEEEEEETT-CC----CEEEEE
T ss_pred CCCCEEEEEEecCCCCCcceEEEEeCCCC---ceEEeeeCCCCcccc-cceECCCCCEEEEEecCCC-CC----cceEEE
Confidence 7766655443322223467888887643 222222211101111 12222 454 433332211 11 124999
Q ss_pred EECCCCcEEeccCC
Q 004198 293 LDTAAGVWLDRNGL 306 (769)
Q Consensus 293 yd~~t~~W~~~~~~ 306 (769)
+|+++++-+.+...
T Consensus 269 ~d~~~g~~~~l~~~ 282 (388)
T 3pe7_A 269 ADPETLENRQLTSM 282 (388)
T ss_dssp ECTTTCCEEEEEEE
T ss_pred EecCCCceEEEEcC
Confidence 99999886665443
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=81.88 E-value=44 Score=33.35 Aligned_cols=179 Identities=15% Similarity=0.154 Sum_probs=83.0
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
+.+..||+.+.+-...-.. ....-.++.+ ++..++.|+. ...+.+||+.+.. -..... .. .
T Consensus 87 ~~i~vwd~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~s~~~------d~~i~iwd~~~~~--~~~~~~--~~--~ 149 (312)
T 4ery_A 87 KTLKIWDVSSGKCLKTLKG-----HSNYVFCCNFNPQSNLIVSGSF------DESVRIWDVKTGK--CLKTLP--AH--S 149 (312)
T ss_dssp SEEEEEETTTCCEEEEEEC-----CSSCEEEEEECSSSSEEEEEET------TSCEEEEETTTCC--EEEEEC--CC--S
T ss_pred CEEEEEECCCCcEEEEEcC-----CCCCEEEEEEcCCCCEEEEEeC------CCcEEEEECCCCE--EEEEec--CC--C
Confidence 4688888887654322111 0011111222 3345555553 2348999998743 222211 10 1
Q ss_pred ccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEE-cCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCc
Q 004198 153 RYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQR-LNPEGDRPSARMYATASARSDGMFLLCGGRDASGAP 231 (769)
Q Consensus 153 R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~-v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~ 231 (769)
..-.++....++.+++.|+.++ .+.+||+.+. +... +... ............++.+++.|+.+
T Consensus 150 ~~v~~~~~~~~~~~l~~~~~d~-----~i~~wd~~~~--~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~d----- 213 (312)
T 4ery_A 150 DPVSAVHFNRDGSLIVSSSYDG-----LCRIWDTASG--QCLKTLIDD----DNPPVSFVKFSPNGKYILAATLD----- 213 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEETTTC--CEEEEECCS----SCCCEEEEEECTTSSEEEEEETT-----
T ss_pred CcEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCC--ceeeEEecc----CCCceEEEEECCCCCEEEEEcCC-----
Confidence 1111232334446677777654 4788898776 3222 1111 11111223344677777777654
Q ss_pred ccceEEEecCCCCceEEEeCCCCCCCcccceEEEE--eCCEEEEEecccCCCCcccCCCcEEEEECCCCc
Q 004198 232 LADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVF--VGARLHVTGGALRGGRAIEGEAAVAVLDTAAGV 299 (769)
Q Consensus 232 l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~--~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~ 299 (769)
..+..|+..+. .-... ..+.. .......+.. .++.+++.|+.. ..+.+||..+.+
T Consensus 214 -~~i~iwd~~~~-~~~~~-~~~~~-~~~~~~~~~~~~~~~~~l~sg~~d---------g~i~vwd~~~~~ 270 (312)
T 4ery_A 214 -NTLKLWDYSKG-KCLKT-YTGHK-NEKYCIFANFSVTGGKWIVSGSED---------NLVYIWNLQTKE 270 (312)
T ss_dssp -TEEEEEETTTT-EEEEE-ECSSC-CSSSCCCEEEECSSSCEEEECCTT---------SCEEEEETTTCC
T ss_pred -CeEEEEECCCC-cEEEE-EEecC-CceEEEEEEEEeCCCcEEEEECCC---------CEEEEEECCCch
Confidence 24556666543 11111 11111 1111111222 356677777632 348899998765
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=81.83 E-value=54 Score=34.31 Aligned_cols=181 Identities=14% Similarity=0.097 Sum_probs=89.1
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
+.++.||..+++...+.... ....-.++.+ ++..++.|+. ...+.+||+.+.. ..... ...
T Consensus 113 ~~v~lw~~~~~~~~~~~~~~----~~~~v~~v~~s~~~~~l~~~~~------dg~i~iwd~~~~~--~~~~~---~~~-- 175 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAETD----ESTYVASVKWSHDGSFLSVGLG------NGLVDIYDVESQT--KLRTM---AGH-- 175 (401)
T ss_dssp TEEEEEETTTCCEEEEEECC----TTCCEEEEEECTTSSEEEEEET------TSCEEEEETTTCC--EEEEE---CCC--
T ss_pred CeEEEeeCCCCcEeEeeecC----CCCCEEEEEECCCCCEEEEECC------CCeEEEEECcCCe--EEEEe---cCC--
Confidence 57999999998877654331 1111122222 3445555553 2358999998743 32221 111
Q ss_pred ccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcc
Q 004198 153 RYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPL 232 (769)
Q Consensus 153 R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l 232 (769)
......+.+.+ .+++.|+.++ .+.++|+......-..+... ...-.+.....++.+++.|+.++
T Consensus 176 ~~~v~~~~~~~-~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~s~~~d~----- 239 (401)
T 4aez_A 176 QARVGCLSWNR-HVLSSGSRSG-----AIHHHDVRIANHQIGTLQGH-----SSEVCGLAWRSDGLQLASGGNDN----- 239 (401)
T ss_dssp SSCEEEEEEET-TEEEEEETTS-----EEEEEETTSSSCEEEEEECC-----SSCEEEEEECTTSSEEEEEETTS-----
T ss_pred CCceEEEEECC-CEEEEEcCCC-----CEEEEecccCcceeeEEcCC-----CCCeeEEEEcCCCCEEEEEeCCC-----
Confidence 11122333444 4666666553 57888887431122222211 11123334446777777777543
Q ss_pred cceEEEecCCCCceEEEeCCCCCCCcccceEEEEe--CCEEEEEecccCCCCcccCCCcEEEEECCCCcEE
Q 004198 233 ADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV--GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWL 301 (769)
Q Consensus 233 ~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~--~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~ 301 (769)
.+..+|..+. .-...... ....-.++++. +..+++.||... ...+.+||+.+.+-.
T Consensus 240 -~v~iwd~~~~-~~~~~~~~----~~~~v~~~~~~p~~~~ll~~~~gs~-------d~~i~i~d~~~~~~~ 297 (401)
T 4aez_A 240 -VVQIWDARSS-IPKFTKTN----HNAAVKAVAWCPWQSNLLATGGGTM-------DKQIHFWNAATGARV 297 (401)
T ss_dssp -CEEEEETTCS-SEEEEECC----CSSCCCEEEECTTSTTEEEEECCTT-------TCEEEEEETTTCCEE
T ss_pred -eEEEccCCCC-CccEEecC----CcceEEEEEECCCCCCEEEEecCCC-------CCEEEEEECCCCCEE
Confidence 3556666532 11222111 11111233333 456777775221 235899999876543
|
| >3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A | Back alignment and structure |
|---|
Probab=81.80 E-value=83 Score=36.45 Aligned_cols=191 Identities=8% Similarity=0.012 Sum_probs=92.8
Q ss_pred CcEEEEECCCCcEEEecCCCCCC--cccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCC----cceEE---Eee
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPP--SPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTND----KFKWH---RVV 144 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P--~~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~----~~~W~---~~~ 144 (769)
+-+++||+.+++++......... ....-++++.. ++.||+.. . . .-+++||..+. ...+. ...
T Consensus 392 ~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT-~-~-----~Gl~~~~~~~~~~~~~~~~~~~~~~~ 464 (758)
T 3ott_A 392 GSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWIST-C-L-----GGIFVVDKHKLMQSTSGQYIAEQNYS 464 (758)
T ss_dssp TEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEEE-S-S-----SCEEEEEHHHHHHCCSSEEECSEEEC
T ss_pred CcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEEE-C-C-----CceEEEccccccccCCcceecccccc
Confidence 34778999988888764211111 11111233322 35888842 1 1 12888887531 01121 111
Q ss_pred ecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcc
Q 004198 145 VQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGG 224 (769)
Q Consensus 145 ~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG 224 (769)
....++.. .-.++....++.|+++||.. +-+++||+.++ ++..+.... .+......+...-.+|.|++..
T Consensus 465 ~~~~l~~~-~i~~i~~d~~g~lWi~~~t~-----~Gl~~~d~~~~--~~~~~~~~~-~~~~~~~~~i~~d~~g~lWigt- 534 (758)
T 3ott_A 465 VHNGLSGM-FINQIIPDNEGNVWVLLYNN-----KGIDKINPRTR--EVTKLFADE-LTGEKSPNYLLCDEDGLLWVGF- 534 (758)
T ss_dssp GGGTCSCS-CEEEEEECTTSCEEEEETTC-----SSEEEEETTTT--EEEEECTTT-SCGGGCEEEEEECTTSCEEEEE-
T ss_pred cccccccc-eeeeEEEcCCCCEEEEccCC-----CCcEEEeCCCC--ceEEecCCC-cCCCcccceEEECCCCCEEEEe-
Confidence 11112221 12233344556788866643 34899999888 777764321 1111122333344678888743
Q ss_pred cCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCcEEec
Q 004198 225 RDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDR 303 (769)
Q Consensus 225 ~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~ 303 (769)
. .-+.+|+..+. +++.....+. |. ..-.+++.-++.|++... ..+.+||+++.+....
T Consensus 535 ~-------~Gl~~~~~~~~-~~~~~~~~gl-~~-~~i~~i~~~~g~lWi~t~-----------~Gl~~~~~~~~~~~~~ 592 (758)
T 3ott_A 535 H-------GGVMRINPKDE-SQQSISFGSF-SN-NEILSMTCVKNSIWVSTT-----------NGLWIIDRKTMDARQQ 592 (758)
T ss_dssp T-------TEEEEECC--C-CCCBCCCCC-----CCEEEEEEETTEEEEEES-----------SCEEEEETTTCCEEEC
T ss_pred c-------CceEEEecCCC-ceEEecccCC-Cc-cceEEEEECCCCEEEECC-----------CCeEEEcCCCceeEEe
Confidence 1 23677776543 2211111122 21 122333334777877542 3489999999887654
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=81.74 E-value=49 Score=33.78 Aligned_cols=179 Identities=16% Similarity=0.094 Sum_probs=81.3
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeee-cCCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVV-QGQGPG 151 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~-~g~~p~ 151 (769)
+.+.++|..+.+-...-.. ......++.+ ++..++.||. ...+.+||+.+.......... .+. .
T Consensus 77 g~v~iWd~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~s~~~------d~~v~iw~~~~~~~~~~~~~~~~~h--~ 143 (340)
T 1got_B 77 GKLIIWDSYTTNKVHAIPL-----RSSWVMTCAYAPSGNYVACGGL------DNICSIYNLKTREGNVRVSRELAGH--T 143 (340)
T ss_dssp TEEEEEETTTCCEEEEEEC-----SSSCEEEEEECTTSSEEEEEET------TCEEEEEETTTCSBSCEEEEEEECC--S
T ss_pred CcEEEEECCCCCcceEeec-----CCccEEEEEECCCCCEEEEEeC------CCeEEEEECccCCCcceeEEEecCC--C
Confidence 4688889887654322111 0111112222 3455556654 245788888763221111110 010 0
Q ss_pred CccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCc
Q 004198 152 PRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAP 231 (769)
Q Consensus 152 ~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~ 231 (769)
. .-..+....++. ++.|+.++ .+.++|+.+. +-...-.. ....-.+.....++.+++.|+.++
T Consensus 144 ~-~v~~~~~~~~~~-l~s~s~d~-----~i~~wd~~~~--~~~~~~~~----h~~~v~~~~~~~~~~~l~sg~~d~---- 206 (340)
T 1got_B 144 G-YLSCCRFLDDNQ-IVTSSGDT-----TCALWDIETG--QQTTTFTG----HTGDVMSLSLAPDTRLFVSGACDA---- 206 (340)
T ss_dssp S-CEEEEEEEETTE-EEEEETTS-----CEEEEETTTT--EEEEEECC----CSSCEEEEEECTTSSEEEEEETTS----
T ss_pred c-cEEEEEECCCCc-EEEEECCC-----cEEEEECCCC--cEEEEEcC----CCCceEEEEECCCCCEEEEEeCCC----
Confidence 1 111222334445 45555443 4778898876 32221111 111123344456777888887653
Q ss_pred ccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCc
Q 004198 232 LADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGV 299 (769)
Q Consensus 232 l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~ 299 (769)
.+..+|..+.. -... ..+. ...-.++++. ++..++.|+.. ..+.+||+.+.+
T Consensus 207 --~v~~wd~~~~~-~~~~-~~~h---~~~v~~v~~~p~~~~l~s~s~d---------~~v~iwd~~~~~ 259 (340)
T 1got_B 207 --SAKLWDVREGM-CRQT-FTGH---ESDINAICFFPNGNAFATGSDD---------ATCRLFDLRADQ 259 (340)
T ss_dssp --CEEEEETTTCS-EEEE-ECCC---SSCEEEEEECTTSSEEEEEETT---------SCEEEEETTTTE
T ss_pred --cEEEEECCCCe-eEEE-EcCC---cCCEEEEEEcCCCCEEEEEcCC---------CcEEEEECCCCc
Confidence 34455554321 1111 1110 0111223332 56677777742 348899987764
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=81.64 E-value=35 Score=35.37 Aligned_cols=107 Identities=9% Similarity=0.043 Sum_probs=51.0
Q ss_pred EECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEe
Q 004198 160 LVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLL 239 (769)
Q Consensus 160 ~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld 239 (769)
...+.. ++.|+.+ ..+.+||+.+....... .. ....-.+.....++.+++.|+.++ .+..++
T Consensus 214 ~~~~~~-~~~~~~~-----g~i~~~d~~~~~~~~~~-~~-----~~~~i~~~~~~~~~~~l~~~~~d~------~i~i~d 275 (425)
T 1r5m_A 214 WVDDDK-FVIPGPK-----GAIFVYQITEKTPTGKL-IG-----HHGPISVLEFNDTNKLLLSASDDG------TLRIWH 275 (425)
T ss_dssp EEETTE-EEEECGG-----GCEEEEETTCSSCSEEE-CC-----CSSCEEEEEEETTTTEEEEEETTS------CEEEEC
T ss_pred EcCCCE-EEEEcCC-----CeEEEEEcCCCceeeee-cc-----CCCceEEEEECCCCCEEEEEcCCC------EEEEEE
Confidence 334434 5555543 35888998775322221 11 111123344456676777776432 355555
Q ss_pred cCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCc
Q 004198 240 MHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGV 299 (769)
Q Consensus 240 ~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~ 299 (769)
..... ...... + ....-.++++. ++ +++.|+. ...+.+||+.+.+
T Consensus 276 ~~~~~-~~~~~~-~---~~~~i~~~~~~~~~-~l~~~~~---------d~~i~i~d~~~~~ 321 (425)
T 1r5m_A 276 GGNGN-SQNCFY-G---HSQSIVSASWVGDD-KVISCSM---------DGSVRLWSLKQNT 321 (425)
T ss_dssp SSSBS-CSEEEC-C---CSSCEEEEEEETTT-EEEEEET---------TSEEEEEETTTTE
T ss_pred CCCCc-cceEec-C---CCccEEEEEECCCC-EEEEEeC---------CCcEEEEECCCCc
Confidence 54321 111111 0 11111233343 45 6666653 2358999997765
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=81.27 E-value=84 Score=36.19 Aligned_cols=121 Identities=21% Similarity=0.225 Sum_probs=68.0
Q ss_pred CcEEEEECCCCc--EEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 75 NSVHLYDVLTRK--WTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 75 ~dv~~yD~~~~~--W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
+.++.+|..+++ |+.-.............+-+..++.||+..+... ......++.||..+.+..|+.-...+. |..
T Consensus 131 g~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~-~~~~g~v~a~D~~tG~~~W~~~~~~~~-p~~ 208 (689)
T 1yiq_A 131 GRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAE-FGVRGYVTAYDAETGKEAWRFYTVPGD-PKL 208 (689)
T ss_dssp SEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTT-TCCBCEEEEEETTTCCEEEEEESSCCC-TTS
T ss_pred CEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCc-cCCCCEEEEEECCCCcEEEEecccCCC-ccc
Confidence 579999999876 8865431101111222334556888887543211 113457999999998888986532111 110
Q ss_pred c----------------------cc----cEEEEE-CCcEEEEEecCC-------------CCCccCceeEEeCCCCCce
Q 004198 153 R----------------------YG----HVMDLV-SQRYLVSVSGND-------------GKRVLSDAWALDTAQKPYV 192 (769)
Q Consensus 153 R----------------------~~----hs~~~~-~~~~l~v~GG~~-------------~~~~~~dv~~~d~~~~~~~ 192 (769)
. .+ .++++. ..+.+|+..|+. ...+...++.+|.++....
T Consensus 209 ~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~ 288 (689)
T 1yiq_A 209 PPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYV 288 (689)
T ss_dssp CCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEE
T ss_pred ccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCcee
Confidence 0 00 123232 344666654431 1223456999999999889
Q ss_pred EEEcC
Q 004198 193 WQRLN 197 (769)
Q Consensus 193 W~~v~ 197 (769)
|..-.
T Consensus 289 W~~~~ 293 (689)
T 1yiq_A 289 WHYQT 293 (689)
T ss_dssp EEEES
T ss_pred Eeeec
Confidence 98754
|
| >4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A* | Back alignment and structure |
|---|
Probab=81.05 E-value=1.2 Score=50.48 Aligned_cols=66 Identities=20% Similarity=0.199 Sum_probs=41.8
Q ss_pred CEEEEccCCCCH--------------------HHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCCh-----HHHHHH
Q 004198 582 PVKVFGDLHGQF--------------------GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHS-----LETITL 636 (769)
Q Consensus 582 ~i~viGDiHG~~--------------------~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s-----~e~l~l 636 (769)
.|+.++|+||.+ ..+..+++........ .-+|+.||.++..+.+ ..++.+
T Consensus 27 ~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~-----~l~l~~GD~~~g~~~~~~~~g~~~~~~ 101 (546)
T 4h2g_A 27 TILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPN-----VLLLDAGDQYQGTIWFTVYKGAEVAHF 101 (546)
T ss_dssp EEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSS-----EEEEECSCCSSSSHHHHHHTTHHHHHH
T ss_pred EEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCC-----EEEEECCccCCCchhhhhhCChHHHHH
Confidence 389999999864 4455566554321111 1466699999987532 445666
Q ss_pred HHHhhhcCCCceEEecCCcch
Q 004198 637 LLALKIEYPENVHLIRGNHEA 657 (769)
Q Consensus 637 l~~lk~~~p~~v~llrGNHE~ 657 (769)
|..+. --++..||||.
T Consensus 102 ln~lg-----~d~~~~GNHEf 117 (546)
T 4h2g_A 102 MNALR-----YDAMALGNHEF 117 (546)
T ss_dssp HHHHT-----CSEEECCGGGG
T ss_pred HHhcC-----CcEEeccCccc
Confidence 66653 22677899995
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=80.71 E-value=22 Score=41.40 Aligned_cols=179 Identities=10% Similarity=0.046 Sum_probs=82.7
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEE-ECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAA-VGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPR 153 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~-~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R 153 (769)
+.+.+||..+++....-.. ...+ . .+++. -++..++.|+. ...+.+||..+. +...... + ...
T Consensus 35 g~v~iwd~~~~~~~~~~~~--~~~~-v-~~~~~s~~~~~l~~~~~------dg~i~vw~~~~~--~~~~~~~-~---~~~ 98 (814)
T 3mkq_A 35 GRVEIWNYETQVEVRSIQV--TETP-V-RAGKFIARKNWIIVGSD------DFRIRVFNYNTG--EKVVDFE-A---HPD 98 (814)
T ss_dssp SEEEEEETTTTEEEEEEEC--CSSC-E-EEEEEEGGGTEEEEEET------TSEEEEEETTTC--CEEEEEE-C---CSS
T ss_pred CEEEEEECCCCceEEEEec--CCCc-E-EEEEEeCCCCEEEEEeC------CCeEEEEECCCC--cEEEEEe-c---CCC
Confidence 5788999988765432211 0111 1 11222 23444555553 245899999884 3333221 1 111
Q ss_pred cccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEec-CCEEEEEcccCCCCCcc
Q 004198 154 YGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARS-DGMFLLCGGRDASGAPL 232 (769)
Q Consensus 154 ~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~-~g~l~v~GG~~~~~~~l 232 (769)
.-.+++...++..++.|+.++ .+.+||+.++. .....-.. ....-.++.... ++.+++.|+.++
T Consensus 99 ~v~~~~~s~~~~~l~~~~~dg-----~i~vw~~~~~~-~~~~~~~~----~~~~v~~~~~~p~~~~~l~~~~~dg----- 163 (814)
T 3mkq_A 99 YIRSIAVHPTKPYVLSGSDDL-----TVKLWNWENNW-ALEQTFEG----HEHFVMCVAFNPKDPSTFASGCLDR----- 163 (814)
T ss_dssp CEEEEEECSSSSEEEEEETTS-----EEEEEEGGGTS-EEEEEEEC----CSSCEEEEEEETTEEEEEEEEETTS-----
T ss_pred CEEEEEEeCCCCEEEEEcCCC-----EEEEEECCCCc-eEEEEEcC----CCCcEEEEEEEcCCCCEEEEEeCCC-----
Confidence 112333333444556666543 47778876641 22111111 111112233334 567777776542
Q ss_pred cceEEEecCCCC-ceEEEeCCCCCCCcccceEEEEe---CCEEEEEecccCCCCcccCCCcEEEEECCCCc
Q 004198 233 ADAYGLLMHRNG-QWEWTLAPGVAPSPRYQHAAVFV---GARLHVTGGALRGGRAIEGEAAVAVLDTAAGV 299 (769)
Q Consensus 233 ~d~~~ld~~~~~-~W~W~~~~~~~P~~R~~hs~~~~---~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~ 299 (769)
.+..++..... ....... ....-..+++. ++..++.|+.. ..+.+||..+.+
T Consensus 164 -~v~vwd~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~l~~~~~d---------g~i~~~d~~~~~ 219 (814)
T 3mkq_A 164 -TVKVWSLGQSTPNFTLTTG-----QERGVNYVDYYPLPDKPYMITASDD---------LTIKIWDYQTKS 219 (814)
T ss_dssp -EEEEEETTCSSCSEEEECC-----CTTCCCEEEECCSTTCCEEEEECTT---------SEEEEEETTTTE
T ss_pred -eEEEEECCCCcceeEEecC-----CCCCEEEEEEEECCCCCEEEEEeCC---------CEEEEEECCCCc
Confidence 35556654321 1111111 10111223332 56677777632 358899987765
|
| >1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1 | Back alignment and structure |
|---|
Probab=80.59 E-value=29 Score=33.22 Aligned_cols=156 Identities=14% Similarity=0.115 Sum_probs=80.2
Q ss_pred eEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeec---CCCCCCccccEEEEE-CCcEEEEEecCCCCCccC
Q 004198 104 AAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQ---GQGPGPRYGHVMDLV-SQRYLVSVSGNDGKRVLS 179 (769)
Q Consensus 104 s~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~---g~~p~~R~~hs~~~~-~~~~l~v~GG~~~~~~~~ 179 (769)
+++.+.+.+|+|=| +-+|+++.............. ..+|.. .. ++... .++.+|+|-| +
T Consensus 11 Ai~~~~g~~yfFkg--------~~~Wr~~~~~~~~~~~p~~Is~~w~glP~~-ID-Aa~~~~~~~~~yfFkG-------~ 73 (195)
T 1itv_A 11 AIAEIGNQLYLFKD--------GKYWRFSEGRGSRPQGPFLIADKWPALPRK-LD-SVFEEPLSKKLFFFSG-------R 73 (195)
T ss_dssp EEEEETTEEEEEET--------TEEEEECCSSSCCCEEEEEHHHHCTTSCSS-CS-EEEECTTTCCEEEEET-------T
T ss_pred EEEEeCCEEEEEEC--------CEEEEEECCccccCCCcEEhhhccCCCCCC-cc-EEEEECCCCeEEEEeC-------C
Confidence 45557888999876 237888765410112222111 123432 11 22233 2457888877 4
Q ss_pred ceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCC---ceEEE---eCCC
Q 004198 180 DAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNG---QWEWT---LAPG 253 (769)
Q Consensus 180 dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~---~W~W~---~~~~ 253 (769)
.+|+|+..+-. .=..+...|-+.....-.+|....++++|+|-| +..|+|+..+.. ..-+. ..++
T Consensus 74 ~yw~~~~~~~~-~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg--------~~ywr~d~~~~~~~~gyPr~i~~~w~G 144 (195)
T 1itv_A 74 QVWVYTGASVL-GPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG--------RRLWRFDVKAQMVDPRSASEVDRMFPG 144 (195)
T ss_dssp EEEEEETTEEE-EEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET--------TEEEEEETTTTEECGGGCEEHHHHSTT
T ss_pred EEEEEcCCccC-CCEEeeecccCCCccceeEEEEcCCCeEEEEeC--------CEEEEEeCCcccccCCCccChhhcCCC
Confidence 67888754320 112233222211112234444466889999976 357888875430 00000 0112
Q ss_pred CCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCc
Q 004198 254 VAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGV 299 (769)
Q Consensus 254 ~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~ 299 (769)
. |.--.++...++.+|+|-| +..|.||..+.+
T Consensus 145 v---p~~idaa~~~~g~~Yffkg-----------~~y~~~~~~~~~ 176 (195)
T 1itv_A 145 V---PLDTHDVFQFREKAYFCQD-----------RFYWRVSSRSEL 176 (195)
T ss_dssp S---CSSCSEEEEETTEEEEEET-----------TEEEEEECCTTC
T ss_pred C---CCCCCEEEEeCCeEEEEeC-----------CEEEEEECCccE
Confidence 2 1222344455799999977 347899987764
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=80.50 E-value=15 Score=38.04 Aligned_cols=133 Identities=14% Similarity=0.148 Sum_probs=56.9
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
+.+.+||+.++.|+.+.... .....-.++.+ ++..++.|+. ...+.+||+.+.. .|...... ....
T Consensus 33 ~~i~iw~~~~~~~~~~~~~~---~h~~~v~~~~~s~~~~~l~s~s~------d~~v~vwd~~~~~-~~~~~~~~--~~~~ 100 (377)
T 3dwl_C 33 NQVELYEQDGNGWKHARTFS---DHDKIVTCVDWAPKSNRIVTCSQ------DRNAYVYEKRPDG-TWKQTLVL--LRLN 100 (377)
T ss_dssp SCBCEEEEETTEEEECCCBC---CCSSCEEEEEECTTTCCEEEEET------TSSEEEC-------CCCCEEEC--CCCS
T ss_pred CEEEEEEccCCceEEEEEEe---cCCceEEEEEEeCCCCEEEEEeC------CCeEEEEEcCCCC-ceeeeeEe--cccC
Confidence 46778888888888765441 11111122222 3455555653 2348888888732 13333210 1111
Q ss_pred ccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccC
Q 004198 153 RYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRD 226 (769)
Q Consensus 153 R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~ 226 (769)
..-.++....+..+++.|+.++ .+.+||+.+.. .|..+..... +....-.+.....++.+++.|+.+
T Consensus 101 ~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~-~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~~~~~d 167 (377)
T 3dwl_C 101 RAATFVRWSPNEDKFAVGSGAR-----VISVCYFEQEN-DWWVSKHLKR-PLRSTILSLDWHPNNVLLAAGCAD 167 (377)
T ss_dssp SCEEEEECCTTSSCCEEEESSS-----CEEECCC------CCCCEEECS-SCCSCEEEEEECTTSSEEEEEESS
T ss_pred CceEEEEECCCCCEEEEEecCC-----eEEEEEECCcc-cceeeeEeec-ccCCCeEEEEEcCCCCEEEEEeCC
Confidence 1112232333445666676554 36677776541 1211211100 112222334445677777877764
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=80.26 E-value=64 Score=34.17 Aligned_cols=91 Identities=13% Similarity=0.118 Sum_probs=47.8
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCcc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRY 154 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~ 154 (769)
+.+.+||..+.+-...-.. ....-.+...++.+++.|+.+ ..+.++|+.+.. -.... .....
T Consensus 153 g~i~iwd~~~~~~~~~~~~-----h~~~v~~l~~~~~~l~sg~~d------g~i~vwd~~~~~--~~~~~-----~~h~~ 214 (435)
T 1p22_A 153 NTIKIWDKNTLECKRILTG-----HTGSVLCLQYDERVIITGSSD------STVRVWDVNTGE--MLNTL-----IHHCE 214 (435)
T ss_dssp SCEEEEESSSCCEEEEECC-----CSSCEEEEECCSSEEEEEETT------SCEEEEESSSCC--EEEEE-----CCCCS
T ss_pred CeEEEEeCCCCeEEEEEcC-----CCCcEEEEEECCCEEEEEcCC------CeEEEEECCCCc--EEEEE-----cCCCC
Confidence 5788999988764433211 111122333356666666642 348999998843 22221 11111
Q ss_pred ccEEEEECCcEEEEEecCCCCCccCceeEEeCCCC
Q 004198 155 GHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQK 189 (769)
Q Consensus 155 ~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~ 189 (769)
.-....+.+ .+++.|+.++ .+.+||+.+.
T Consensus 215 ~v~~l~~~~-~~l~s~s~dg-----~i~vwd~~~~ 243 (435)
T 1p22_A 215 AVLHLRFNN-GMMVTCSKDR-----SIAVWDMASP 243 (435)
T ss_dssp CEEEEECCT-TEEEEEETTS-----CEEEEECSSS
T ss_pred cEEEEEEcC-CEEEEeeCCC-----cEEEEeCCCC
Confidence 223333444 4566666554 4777888765
|
| >2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=80.04 E-value=1.6 Score=49.51 Aligned_cols=66 Identities=21% Similarity=0.212 Sum_probs=41.0
Q ss_pred CEEEEccCCCCH-----------------HHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCC-----hHHHHHHHHH
Q 004198 582 PVKVFGDLHGQF-----------------GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQH-----SLETITLLLA 639 (769)
Q Consensus 582 ~i~viGDiHG~~-----------------~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~-----s~e~l~ll~~ 639 (769)
.|+.++|+||.+ ..+..+++.......+ .-+|..||++++.+. ...++..|..
T Consensus 31 ~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~-----~l~l~~GD~~~gs~~~~~~~~~~~~~~ln~ 105 (552)
T 2z1a_A 31 TLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKN-----PLFLDAGDVFQGTLYFNQYRGLADRYFMHR 105 (552)
T ss_dssp EEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSS-----EEEEECSCCSSSSHHHHHHTTHHHHHHHHH
T ss_pred EEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCCC-----EEEEeCCCCCCCcHHHHHhCCcHHHHHHHh
Confidence 388999999863 4566666554311111 135668999997653 2345555555
Q ss_pred hhhcCCCceEEecCCcch
Q 004198 640 LKIEYPENVHLIRGNHEA 657 (769)
Q Consensus 640 lk~~~p~~v~llrGNHE~ 657 (769)
+. --++..||||.
T Consensus 106 lg-----~d~~~lGNHEf 118 (552)
T 2z1a_A 106 LR-----YRAMALGNHEF 118 (552)
T ss_dssp TT-----CCEEECCGGGG
T ss_pred cC-----CCccccccccc
Confidence 43 23677899996
|
| >1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A* | Back alignment and structure |
|---|
Probab=80.01 E-value=74 Score=34.77 Aligned_cols=58 Identities=12% Similarity=0.105 Sum_probs=39.0
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCC
Q 004198 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHS 124 (769)
Q Consensus 45 ~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~ 124 (769)
++++|+|-| +..|+||..+++...-.-.| . +. --++....+.+|+|=|
T Consensus 158 ~~~~yfFkG---------------------~~yw~yd~~~~~~~~~~w~g-i--~~-iDAA~~~~g~~YfFkG------- 205 (460)
T 1qhu_A 158 DEGILFFQG---------------------NRKWFWDLTTGTKKERSWPA-V--GN-CTSALRWLGRYYCFQG------- 205 (460)
T ss_dssp SSEEEEEET---------------------TEEEEEETTTTEEEEECCTT-S--CC-CSEEEEETTEEEEEET-------
T ss_pred CCeEEEEec---------------------ccEEEEecccceeecccCCC-C--Cc-cchheeeCCceEEEEC-------
Confidence 567888888 36899999988766433333 2 23 2455555789999987
Q ss_pred cCcEEEEEccC
Q 004198 125 TDDLYVLDLTN 135 (769)
Q Consensus 125 ~~dl~~~d~~t 135 (769)
+..|+||..+
T Consensus 206 -~~y~rfd~~~ 215 (460)
T 1qhu_A 206 -NQFLRFNPVS 215 (460)
T ss_dssp -TEEEEECTTT
T ss_pred -CEEEEEcCcc
Confidence 3478888754
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 769 | ||||
| d1jk7a_ | 294 | d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human | 9e-60 | |
| d1auia_ | 473 | d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calc | 1e-58 | |
| d3c5wc1 | 288 | d.159.1.3 (C:6-293) Protein phosphatase 2A catalyt | 6e-55 | |
| d1s95a_ | 324 | d.159.1.3 (A:) Serine/threonine protein phosphatas | 1e-51 | |
| d1g5ba_ | 219 | d.159.1.3 (A:) lambda ser/thr protein phosphatase | 8e-13 | |
| d1nnwa_ | 251 | d.159.1.5 (A:) Hypothetical protein PF1291 {Archae | 6e-12 | |
| d1zgka1 | 288 | b.68.11.1 (A:322-609) Kelch-like ECH-associated pr | 7e-08 | |
| d1zgka1 | 288 | b.68.11.1 (A:322-609) Kelch-like ECH-associated pr | 2e-04 | |
| d1su1a_ | 184 | d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia | 4e-07 | |
| d1k3ia3 | 387 | b.69.1.1 (A:151-537) Galactose oxidase, central do | 3e-05 | |
| d1k3ia3 | 387 | b.69.1.1 (A:151-537) Galactose oxidase, central do | 6e-05 |
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} Length = 294 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Score = 202 bits (514), Expect = 9e-60
Identities = 97/209 (46%), Positives = 129/209 (61%), Gaps = 13/209 (6%)
Query: 533 KIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQ 592
II LL R K + L E+ LC + +IF+ +P +L+L AP+K+ GD+HGQ
Sbjct: 6 SIIQRLLEVRGSKP--GKNVQLQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQ 63
Query: 593 FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIR 652
+ DL+RLF+ GFP +YLFLGDYVDRG+ SLETI LLLA KI+YPEN L+R
Sbjct: 64 YYDLLRLFEYGGFPPE------SNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 117
Query: 653 GNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGR 712
GNHE A IN ++GF EC R W F FNCLP+AA++++KI C HGG+
Sbjct: 118 GNHECASINRIYGFYDECKRRYNIK----LWKTFTDCFNCLPIAAIVDEKIFCCHGGLSP 173
Query: 713 SIHSVEQIEKLERPITMDAGSIILMDLLW 741
+ S+EQI ++ RP + +L DLLW
Sbjct: 174 DLQSMEQIRRIMRPTDVPDQG-LLCDLLW 201
|
| >d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} Length = 473 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit) species: Human (Homo sapiens) [TaxId: 9606]
Score = 204 bits (521), Expect = 1e-58
Identities = 74/188 (39%), Positives = 105/188 (55%), Gaps = 11/188 (5%)
Query: 554 LDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDIT 613
L+ + I QE +L + APV V GD+HGQF DLM+LF+ G P+
Sbjct: 43 LEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT---- 98
Query: 614 YIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIER 673
YLFLGDYVDRG S+E + L ALKI YP+ + L+RGNHE + F F+ EC +
Sbjct: 99 --RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIK 156
Query: 674 MGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGS 733
E + F+CLPLAAL+ ++ +C+HGG+ I++++ I KL+R A
Sbjct: 157 YSER----VYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG 212
Query: 734 IILMDLLW 741
+ D+LW
Sbjct: 213 PM-CDILW 219
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 188 bits (479), Expect = 6e-55
Identities = 79/188 (42%), Positives = 114/188 (60%), Gaps = 10/188 (5%)
Query: 554 LDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDIT 613
L +V LC A++I +E V ++R PV V GD+HGQF DLM LF G
Sbjct: 18 LSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDT---- 73
Query: 614 YIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIER 673
+YLF+GDYVDRG +S+ET+TLL+ALK+ Y E + ++RGNHE+ I ++GF EC+ +
Sbjct: 74 --NYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRK 131
Query: 674 MGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGS 733
G + W F LF+ LPL AL++ +I C+HGG+ SI +++ I L+R +
Sbjct: 132 YGNAN---VWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPH-E 187
Query: 734 IILMDLLW 741
+ DLLW
Sbjct: 188 GPMCDLLW 195
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} Length = 324 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 180 bits (459), Expect = 1e-51
Identities = 62/193 (32%), Positives = 98/193 (50%), Gaps = 15/193 (7%)
Query: 554 LDSYEVGELCYAAEQIFMQEPTVLQL----RAPVKVFGDLHGQFGDLMRLFDEYGFPSTA 609
L ++ +++ + T+++ + V GD HGQF DL+ +F+ G PS
Sbjct: 29 LHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLPSET 88
Query: 610 GDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLE 669
Y+F GD+VDRG S+E I L K+ YP++ HL+RGNHE ++N ++GF E
Sbjct: 89 NP-----YIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGE 143
Query: 670 CIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGG-IGRSIHSVEQIEKLERPIT 728
+ + F+++F LPLA I K++ MHGG +++ I K+ER
Sbjct: 144 VKAKYTAQ----MYELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQ 199
Query: 729 MDAGSIILMDLLW 741
S + DLLW
Sbjct: 200 -PPDSGPMCDLLW 211
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} Length = 219 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Score = 66.4 bits (161), Expect = 8e-13
Identities = 36/159 (22%), Positives = 54/159 (33%), Gaps = 26/159 (16%)
Query: 585 VFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEY 644
V GDLHG + +LM D GF + + +GD VDRG ++E + L
Sbjct: 17 VVGDLHGCYTNLMNKLDTIGFDNKKD-----LLISVGDLVDRGAENVECLEL------IT 65
Query: 645 PENVHLIRGNHEAADINALFGFRLECIERMGENDGIWA----------WTRFNQLFNCLP 694
+RGNHE I+ L + N G W + LP
Sbjct: 66 FPWFRAVRGNHEQMMIDGLSERG--NVNHWLLNGGGWFFNLDYDKEILAKALAHKADELP 123
Query: 695 LA---ALIEKKIICMHGGIGRSIHSVEQIEKLERPITMD 730
L +KK + H + + ++ I
Sbjct: 124 LIIELVSKDKKYVICHADYPFDEYEFGKPVDHQQVIWNR 162
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Score = 64.3 bits (155), Expect = 6e-12
Identities = 25/174 (14%), Positives = 50/174 (28%), Gaps = 9/174 (5%)
Query: 582 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYID-YLFLGDYVDRGQHSLETITLLLAL 640
V V ++ G L + I+ Y LG+ V + E I ++ L
Sbjct: 2 YVAVLANIAGNLPALTAALSRIEE--MREEGYEIEKYYILGNIVGLFPYPKEVIEVIKDL 59
Query: 641 KIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDG----IWAWTRFNQLFNCLPLA 696
ENV +IRG ++ + E G +T
Sbjct: 60 T--KKENVKIIRGKYDQIIAMSDPHATDPGYIDKLELPGHVKKALKFTWEKLGHEGREYL 117
Query: 697 ALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWFVLNISTIL 750
+ ++ GG I + + + + ++ V + ++
Sbjct: 118 RDLPIYLVDKIGGNEVFGVYGSPINPFDGEVLAEQPTSYYEAIMRPVKDYEMLI 171
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.6 bits (124), Expect = 7e-08
Identities = 36/284 (12%), Positives = 58/284 (20%), Gaps = 39/284 (13%)
Query: 74 TNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDL 133
+ + Y+ W R+ + PR+ A VG ++ GG + D LD
Sbjct: 18 LSYLEAYNPSNGTWLRL---ADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDC 74
Query: 134 TNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVW 193
N + R + V DG
Sbjct: 75 YNPMTNQWS-------------PCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVER 121
Query: 194 QRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPG 253
+ A M T L G + +
Sbjct: 122 YEPERDEWHLVAPML-TRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMIT 180
Query: 254 VAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTS 313
+ R + ++ GG +
Sbjct: 181 AMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNS----------------------VERYDV 218
Query: 314 KGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLDDFLV 357
+ + RR RIY+ GG G LD
Sbjct: 219 ETETWTFVAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVEC 262
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.4 bits (95), Expect = 2e-04
Identities = 17/101 (16%), Positives = 25/101 (24%), Gaps = 23/101 (22%)
Query: 6 WLHPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSA 65
L+ Y W R +T R+ + GG
Sbjct: 209 QLNSVERYDVETETWTFVAPMKHRRSALGITVH------QGRIYVLGGYDG--------- 253
Query: 66 PGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAA 106
+SV YD T W+ + S R+ A
Sbjct: 254 -----HTFLDSVECYDPDTDTWSEVTRM---TSGRSGVGVA 286
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} Length = 184 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Score = 48.8 bits (115), Expect = 4e-07
Identities = 24/154 (15%), Positives = 48/154 (31%), Gaps = 16/154 (10%)
Query: 585 VFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITL----LLAL 640
D+HG R+ + + + LGD ++ G + ++
Sbjct: 6 FASDIHGSLPATERVLELFAQS------GAQWLVILGDVLNHGPRNALPEGYAPAKVVER 59
Query: 641 KIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIE 700
E V +RGN ++ L F + + + + LF L AL +
Sbjct: 60 LNEVAHKVIAVRGNCDSEVDQMLLHFPITAPWQQVLLEKQRLFLTHGHLFGPENLPALNQ 119
Query: 701 KKIICMHGGIGRSIHSVEQIEKLERPITMDAGSI 734
++ H + E+ + GS+
Sbjct: 120 NDVLVYGHT-----H-LPVAEQRGEIFHFNPGSV 147
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Length = 387 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Score = 44.4 bits (103), Expect = 3e-05
Identities = 43/334 (12%), Positives = 72/334 (21%), Gaps = 37/334 (11%)
Query: 26 APGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTR 85
P AA + T R++++ G + G +D T
Sbjct: 15 IDLPIVPAA----AAIEPTSGRVLMWSSYRNDAFGGSP--------GGITLTSSWDPSTG 62
Query: 86 KWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGH-----STDDLYVLDLTNDKFKW 140
+ + +V GG S+D +
Sbjct: 63 IVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGY 122
Query: 141 HRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEG 200
G G + S W K + +G
Sbjct: 123 QSSATMSDGRVFTIGGSWSGGVFEKNG-----EVYSPSSKTWTSLPNAKVNPMLTADKQG 177
Query: 201 DRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRY 260
S +A G G A + +G + + G S R
Sbjct: 178 LYRS-DNHAWLFGWKKGSVFQAGPSTAM---------NWYYTSGSGDVK-SAGKRQSNRG 226
Query: 261 QHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHD 320
G V A++G G + + + TS
Sbjct: 227 VAPDAMCGN--AVMYDAVKGKILTFGGSPDY--QDSDATTNAHIITLGEPGTSPNTVFAS 282
Query: 321 PSLELMRRCRHASASIGVRIYIYGGLKGDILLDD 354
L R + +I GG + I +D
Sbjct: 283 NGLYFARTFHTSVVLPDGSTFITGGQRRGIPFED 316
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Length = 387 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Score = 43.7 bits (101), Expect = 6e-05
Identities = 13/126 (10%), Positives = 27/126 (21%), Gaps = 14/126 (11%)
Query: 5 PWLHPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSS 64
A E + T + + GG S+
Sbjct: 259 DATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDST 318
Query: 65 APGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV---GTMVVFQGGIGPA 121
+ +Y + + P R H+ + + G + GG+
Sbjct: 319 P--------VFTPEIYVPEQDTFYKQNP---NSIVRVYHSISLLLPDGRVFNGGGGLCGD 367
Query: 122 GHSTDD 127
+
Sbjct: 368 CTTNHF 373
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 769 | |||
| d1jk7a_ | 294 | Protein phosphatase-1 (PP-1) {Human (Homo sapiens) | 100.0 | |
| d3c5wc1 | 288 | Protein phosphatase 2A catalytic subunit alpha iso | 100.0 | |
| d1auia_ | 473 | Protein phosphatase-2B (PP-2B, calcineurin A subun | 100.0 | |
| d1s95a_ | 324 | Serine/threonine protein phosphatase 5, PP5 {Human | 100.0 | |
| d1zgka1 | 288 | Kelch-like ECH-associated protein 1, KEAP1 {Human | 100.0 | |
| d1zgka1 | 288 | Kelch-like ECH-associated protein 1, KEAP1 {Human | 100.0 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 99.96 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 99.89 | |
| d1g5ba_ | 219 | lambda ser/thr protein phosphatase {Bacteriophage | 99.75 | |
| d1nnwa_ | 251 | Hypothetical protein PF1291 {Archaeon Pyrococcus f | 99.49 | |
| d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus | 98.89 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 98.62 | |
| d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus j | 98.39 | |
| d2a22a1 | 193 | Vacuolar protein sorting 29, VPS29 {Cryptosporidiu | 98.15 | |
| d3ck2a1 | 173 | Uncharacterized protein SP1879 {Streptococcus pneu | 98.02 | |
| d1z2wa1 | 182 | Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus | 98.0 | |
| d2yvta1 | 257 | Uncharacterized protein Aq_1956 {Aquifex aeolicus | 97.79 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 96.86 | |
| d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aeroge | 96.58 | |
| d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 96.37 | |
| d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycoba | 95.83 | |
| d2nxfa1 | 320 | Uncharacterized C17orf48 homolog zgc:64213 {Zebraf | 95.09 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 94.49 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 94.21 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 92.72 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 92.32 | |
| d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {K | 92.15 | |
| d1utea_ | 302 | Mammalian purple acid phosphatase {Pig (Sus scrofa | 91.45 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 87.65 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 85.6 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 84.92 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 84.07 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 83.22 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 80.32 |
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Probab=100.00 E-value=5.5e-52 Score=430.56 Aligned_cols=225 Identities=44% Similarity=0.808 Sum_probs=207.0
Q ss_pred HHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecCCEEEEccCCCCHHHHHHHHHHhCCCCCCC
Q 004198 531 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG 610 (769)
Q Consensus 531 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~ 610 (769)
++++|++|+..+..++. +...|+++||.+||++|++||++||+++++.+|++||||||||+.||+++|+..|+|+..
T Consensus 4 id~~i~~l~~~~~~~~~--~~~~l~~~~i~~l~~~a~~i~~~e~~ll~i~~pv~VvGDiHG~~~DL~~if~~~g~p~~~- 80 (294)
T d1jk7a_ 4 IDSIIQRLLEVRGSKPG--KNVQLQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES- 80 (294)
T ss_dssp HHHHHHHHHTTTTSCTT--CCCCCCHHHHHHHHHHHHHHHHHSCSEEEECSSEEEECBCTTCHHHHHHHHHHHCCTTSS-
T ss_pred HHHHHHHHHhccCCCCC--cccCCCHHHHHHHHHHHHHHHHhCCCEEEecCCeEEEEECCCChHhHHHHHhhcCCCccc-
Confidence 57888999987655543 234589999999999999999999999999999999999999999999999999999876
Q ss_pred CCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCCCchhhhHHHhHhh
Q 004198 611 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF 690 (769)
Q Consensus 611 ~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~f 690 (769)
+|||||||||||++|+||+.+|++||++||++|++||||||.+.++..|||++||..+|+ ..+|+.++++|
T Consensus 81 -----~ylFLGDYVDRG~~slE~i~lL~aLKi~~P~~v~lLRGNHE~~~~~~~~gF~~e~~~~y~----~~i~~~~~~~F 151 (294)
T d1jk7a_ 81 -----NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN----IKLWKTFTDCF 151 (294)
T ss_dssp -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHTTSSHHHHHHHHSC----HHHHHHHHHHH
T ss_pred -----eEEeeccccCCCccchHHHHHHHHHHhhCCCeEEEecCCcccccccccccchhHHHhhcC----HHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999994 46999999999
Q ss_pred ccccceEEEeceEEEEcCCCCCCCCChHHhhhccCCcccCCCccceeceeccCCCCC--cccccCcceEEeehhhhhhhc
Q 004198 691 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWFVLNIS--TILRSMVLYIILFSLKIFISF 768 (769)
Q Consensus 691 ~~lP~~~~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~~--~~~~~~~~~~~~~~~~~~~~~ 768 (769)
++||+||+|++++|||||||+|.+.++++|+.++||.+.+..+ +++|+|||||... .+..+.++.+..||.+...+|
T Consensus 152 ~~LPlaalI~~~i~cvHGGi~~~~~~l~~i~~i~r~~~~~~~~-~~~dllWsDP~~~~~~~~~~~RG~g~~fg~~~~~~F 230 (294)
T d1jk7a_ 152 NCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQG-LLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKF 230 (294)
T ss_dssp TTCCCEEEETTTEEEESSCCCTTCCCHHHHHTCCSSCCCCSSS-HHHHHHHCEECSSCSSEEECTTSSSEEECHHHHHHH
T ss_pred hhCceeeEEcCeEEEecCcccCCccchhhhhhccCCCCCCCcc-hhhhhhhcCCccccCCCCCCCCCCccccCHHHHHHH
Confidence 9999999999999999999999999999999999999887666 8999999999753 566677777889999988777
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.8e-50 Score=414.72 Aligned_cols=218 Identities=39% Similarity=0.666 Sum_probs=202.3
Q ss_pred HHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecCCEEEEccCCCCHHHHHHHHHHhCCCCCCC
Q 004198 531 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG 610 (769)
Q Consensus 531 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~ 610 (769)
++++|+.+.+.+ .|++++|.+||++|+++|++||+++++.+|++||||||||+.||.++|+..+.|++.
T Consensus 5 ~d~~i~~~~~~~----------~l~~~~i~~L~~~a~~il~~e~~l~~i~~pv~VvGDlHG~~~DL~~if~~~g~p~~~- 73 (288)
T d3c5wc1 5 LDQWIEQLNECK----------QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDT- 73 (288)
T ss_dssp HHHHHHHHTTTC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECBCTTCHHHHHHHHHHHCCTTTS-
T ss_pred HHHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHHhCCCEEEeCCCeEEEeeCCCCHHHHHHHHHhcCCCccc-
Confidence 578999987763 478999999999999999999999999999999999999999999999999998876
Q ss_pred CCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCCCchhhhHHHhHhh
Q 004198 611 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF 690 (769)
Q Consensus 611 ~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~f 690 (769)
+|||||||||||++|+||+.+|++||++||++|++||||||.+.++..|||.+||..+|+. ..+|..++++|
T Consensus 74 -----~ylFLGDYVDRG~~slEvl~lL~alKi~~P~~v~lLRGNHE~~~~~~~~gF~~E~~~ky~~---~~i~~~~~~~F 145 (288)
T d3c5wc1 74 -----NYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGN---ANVWKYFTDLF 145 (288)
T ss_dssp -----CEEECSCCCCSSSSHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHHSHHHHHHHHHSS---SHHHHHHHHHH
T ss_pred -----eEEecCcccCCCCcceeHHHHHHHHHhhCCCeEEEeccCCcccccccccCcchhhhhhcCc---HHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999985 37999999999
Q ss_pred ccccceEEEeceEEEEcCCCCCCCCChHHhhhccCCcccCCCccceeceeccCCCCC-cccccCcceEEeehhhhhhhc
Q 004198 691 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWFVLNIS-TILRSMVLYIILFSLKIFISF 768 (769)
Q Consensus 691 ~~lP~~~~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~~-~~~~~~~~~~~~~~~~~~~~~ 768 (769)
++||+||+|++++|||||||+|.+.++++|+.++||.+.+++. +++|+|||||... .+..+.++-+..||.+...+|
T Consensus 146 ~~LPlaaiI~~~i~cvHGGi~~~~~~~~~i~~i~r~~~~~~~~-~~~dllWsDP~~~~~~~~~~rg~g~~fg~~~~~~F 223 (288)
T d3c5wc1 146 DYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEG-PMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETF 223 (288)
T ss_dssp TTSCSEEEETTTEEEESSCCCTTCSSHHHHHHSCCSSSCCSSS-HHHHHHHCEECSSSSEEECTTSSSEEECHHHHHHH
T ss_pred hhccceEEecCeEEEecccccCCccchhhHhhcccccCCCccc-cccccccCCcccCCCCccCCCCCeeecCHHHHHHH
Confidence 9999999999999999999999999999999999999887665 8999999999754 455566777788999988776
|
| >d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.5e-49 Score=425.39 Aligned_cols=217 Identities=35% Similarity=0.598 Sum_probs=197.2
Q ss_pred HHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecCCEEEEccCCCCHHHHHHHHHHhCCCCCCC
Q 004198 531 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG 610 (769)
Q Consensus 531 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~ 610 (769)
++.+.+.+.+.. .|+++++.+||++|.+||++||++++|.+||+|||||||||.||+++|+..|.|+..
T Consensus 30 ~~~l~~hf~~eg----------rl~~~~~l~li~~a~~il~~Epnll~i~~Pv~VvGDIHGq~~DLl~If~~~G~P~~~- 98 (473)
T d1auia_ 30 VDILKAHLMKEG----------RLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT- 98 (473)
T ss_dssp HHHHHHHHHTTC----------CBCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTC-
T ss_pred HHHHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCCCCHHHHHHHHHHcCCCCcc-
Confidence 355666666543 478999999999999999999999999999999999999999999999999999876
Q ss_pred CCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCCCchhhhHHHhHhh
Q 004198 611 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF 690 (769)
Q Consensus 611 ~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~f 690 (769)
+|||||||||||++|+|||.+|++||++||++|++||||||.+.++..|||..||..+|+ ..+|+.++++|
T Consensus 99 -----~yLFLGDYVDRG~~SlEvlllL~aLKi~yP~~V~LLRGNHE~~~~n~~ygF~~E~~~ky~----~~iy~~~~~~F 169 (473)
T d1auia_ 99 -----RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS----ERVYDACMDAF 169 (473)
T ss_dssp -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHSSHHHHHHHHSC----HHHHHHHHHHH
T ss_pred -----eEEecCccccCCcccHHHHHHHHHHHHhCCCeEEEeCCCCccHhhhcccccHHHHHHhhc----HHHHHHHHHHh
Confidence 899999999999999999999999999999999999999999999999999999999995 46999999999
Q ss_pred ccccceEEEeceEEEEcCCCCCCCCChHHhhhccCCcccCCCccceeceeccCCCCCcc---------cccCcceEEeeh
Q 004198 691 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWFVLNISTI---------LRSMVLYIILFS 761 (769)
Q Consensus 691 ~~lP~~~~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~~~~---------~~~~~~~~~~~~ 761 (769)
++||+||+|+++||||||||+|.+.++++|+.+.||.+.+..+ +++|||||||..+.. -.+.++.++.||
T Consensus 170 ~~LPLAAiI~~kifcVHGGIsp~l~~l~dI~~I~R~~e~p~~~-~~~DLLWSDP~~~~~~~~~~~~~~~ns~RG~g~~FG 248 (473)
T d1auia_ 170 DCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG-PMCDILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYS 248 (473)
T ss_dssp TTSCCEEEETTTEEEESSCCCTTCCSHHHHHHSCCSSSCCSSS-HHHHHHHCEECTTTTSCSSCCCEEECTTTTSSEEEC
T ss_pred ccchhhhhhcCcEEEeeccCCCccCchhhhhhcccccCCCCcC-ceeeeeccCCcccccccccccccccCCCCCCEEEEC
Confidence 9999999999999999999999999999999999999988776 899999999975321 123356677899
Q ss_pred hhhhhhc
Q 004198 762 LKIFISF 768 (769)
Q Consensus 762 ~~~~~~~ 768 (769)
.+...+|
T Consensus 249 ~~a~~~F 255 (473)
T d1auia_ 249 YPAVCEF 255 (473)
T ss_dssp HHHHHHH
T ss_pred hHHHHHH
Confidence 9988777
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-48 Score=409.85 Aligned_cols=221 Identities=29% Similarity=0.498 Sum_probs=200.2
Q ss_pred chHHHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeec----CCEEEEccCCCCHHHHHHHHHHh
Q 004198 528 QGLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLR----APVKVFGDLHGQFGDLMRLFDEY 603 (769)
Q Consensus 528 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~----~~i~viGDiHG~~~~l~~~l~~~ 603 (769)
.++++++|+.+...+ .|+.+++.+||++|+++|++||+++++. +||+|||||||||.||+++|+..
T Consensus 13 ~~~~~~li~~~~~~~----------~l~~~~~~~ll~~~~~il~~e~~l~~i~~~~~~pv~VvGDiHGq~~DL~~if~~~ 82 (324)
T d1s95a_ 13 ISFMKELMQWYKDQK----------KLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELN 82 (324)
T ss_dssp HHHHHHHHHHHHTTC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECCCTTCEEEEECCCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHhCCCeEEeecCCCCCEEEEEECCCCHHHHHHHHHHC
Confidence 356788888877653 4789999999999999999999999984 69999999999999999999999
Q ss_pred CCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCCCchhhh
Q 004198 604 GFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAW 683 (769)
Q Consensus 604 ~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~ 683 (769)
|+|++.. +|||||||||||++|+||+.+|++||++||++|++||||||...++..|||++||..+|+ ..+|
T Consensus 83 g~p~~~~-----~ylFLGDYVDRG~~slEvi~lL~~lKi~yP~~v~LLRGNHE~~~~n~~ygF~~e~~~k~~----~~l~ 153 (324)
T d1s95a_ 83 GLPSETN-----PYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYT----AQMY 153 (324)
T ss_dssp CCCBTTB-----CEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHHHHHHHHSC----HHHH
T ss_pred CCCCCCC-----eEEEecccccCcCcceeehHHHHHHHHhCCCcEEeccCCccccccccccccchHhhhhcC----HHHH
Confidence 9998652 699999999999999999999999999999999999999999999999999999999994 4699
Q ss_pred HHHhHhhccccceEEEeceEEEEcCCCC-CCCCChHHhhhccCCcccCCCccceeceeccCCCCC-cccccCcceEEeeh
Q 004198 684 TRFNQLFNCLPLAALIEKKIICMHGGIG-RSIHSVEQIEKLERPITMDAGSIILMDLLWFVLNIS-TILRSMVLYIILFS 761 (769)
Q Consensus 684 ~~~~~~f~~lP~~~~i~~~i~~vHgGi~-~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~~-~~~~~~~~~~~~~~ 761 (769)
..++++|++||+||+|++++|||||||+ +.+.++++|++++||.+.++.+ +++|+|||||.+. ....+.++.+..||
T Consensus 154 ~~~~~~F~~LPlaa~I~~~ilcvHGGi~~~~~~~l~~i~~i~r~~~~~~~~-~~~dlLWSDP~~~~~~~~~~Rg~g~~FG 232 (324)
T d1s95a_ 154 ELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSG-PMCDLLWSDPQPQNGRSISKRGVSCQFG 232 (324)
T ss_dssp HHHHHHHTTSCSEEEETTTEEECSSCCCSSSCCCHHHHHTCCCSSSCCSSS-HHHHHHHCEECSSSSEEECTTSSSEEEC
T ss_pred HHHHHHHhhcchhhhccCcEEEecCCcCccccCCHHHHHhccCCCCCcchh-hhhhhhccCccccCCcCcCCCCCcCCcC
Confidence 9999999999999999999999999996 5689999999999999987665 8999999999764 45556677778899
Q ss_pred hhhhhhc
Q 004198 762 LKIFISF 768 (769)
Q Consensus 762 ~~~~~~~ 768 (769)
.+...+|
T Consensus 233 ~~~~~~F 239 (324)
T d1s95a_ 233 PDVTKAF 239 (324)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9888776
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-33 Score=293.26 Aligned_cols=269 Identities=19% Similarity=0.270 Sum_probs=228.7
Q ss_pred CCCCCcccccceeecCCCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcE
Q 004198 8 HPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKW 87 (769)
Q Consensus 8 ~~~~~y~~~~~~w~~~~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W 87 (769)
...-.||+.+++|..++++|.||.+|+++++ +++||||||....... ...++++++||+.+++|
T Consensus 19 ~~~~~yd~~t~~W~~~~~~p~~R~~~~~~~~------~~~iyv~GG~~~~~~~----------~~~~~~~~~yd~~~~~w 82 (288)
T d1zgka1 19 SYLEAYNPSNGTWLRLADLQVPRSGLAGCVV------GGLLYAVGGRNNSPDG----------NTDSSALDCYNPMTNQW 82 (288)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEE------TTEEEEECCEEEETTE----------EEECCCEEEEETTTTEE
T ss_pred ceEEEEECCCCeEEECCCCCCccceeEEEEE------CCEEEEEeCcccCCCC----------ccccchhhhcccccccc
Confidence 3455899999999999999999999999999 8999999997533211 11578999999999999
Q ss_pred EEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEE
Q 004198 88 TRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLV 167 (769)
Q Consensus 88 ~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~ 167 (769)
++++++ |.+|++|+++.+++++|++||.. .....++.++||+.+ ..|... ...+.+|++|+++...+ .++
T Consensus 83 ~~~~~~---p~~r~~~~~~~~~~~i~~~gg~~-~~~~~~~~~~~~~~~--~~~~~~---~~~~~~r~~~~~~~~~~-~~~ 152 (288)
T d1zgka1 83 SPCAPM---SVPRNRIGVGVIDGHIYAVGGSH-GCIHHNSVERYEPER--DEWHLV---APMLTRRIGVGVAVLNR-LLY 152 (288)
T ss_dssp EECCCC---SSCCBTCEEEEETTEEEEECCEE-TTEECCCEEEEETTT--TEEEEC---CCCSSCCBSCEEEEETT-EEE
T ss_pred cccccc---cceecceeccccceeeEEeccee-cccccceeeeecccc--Cccccc---cccccccccceeeeeee-cce
Confidence 998754 78999999999999999999974 445678899999999 779887 57889999999988876 899
Q ss_pred EEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceE
Q 004198 168 SVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWE 247 (769)
Q Consensus 168 v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~ 247 (769)
++||.+.....++++.||+.++ +|...... +..+..|+++. .++.++++||.+.. ..+++.+.|+..+. +
T Consensus 153 ~~GG~~~~~~~~~~~~~d~~~~--~~~~~~~~---~~~~~~~~~~~-~~~~i~i~GG~~~~-~~~~~~~~~~~~~~---~ 222 (288)
T d1zgka1 153 AVGGFDGTNRLNSAECYYPERN--EWRMITAM---NTIRSGAGVCV-LHNCIYAAGGYDGQ-DQLNSVERYDVETE---T 222 (288)
T ss_dssp EECCBCSSCBCCCEEEEETTTT--EEEECCCC---SSCCBSCEEEE-ETTEEEEECCBCSS-SBCCCEEEEETTTT---E
T ss_pred EecCcccccccceEEEeecccc--cccccccc---ccccccccccc-eeeeEEEecCcccc-ccccceeeeeecce---e
Confidence 9999988888999999999998 99988655 56676676665 57799999998765 45789999999876 8
Q ss_pred EEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccCccc
Q 004198 248 WTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMR 327 (769)
Q Consensus 248 W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (769)
|...+.. |.+|..|++++++++|||+||.+... ..+++++||+++++|+.+..++. +
T Consensus 223 ~~~~~~~-p~~r~~~~~~~~~~~l~v~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~p~------------------~ 279 (288)
T d1zgka1 223 WTFVAPM-KHRRSALGITVHQGRIYVLGGYDGHT----FLDSVECYDPDTDTWSEVTRMTS------------------G 279 (288)
T ss_dssp EEECCCC-SSCCBSCEEEEETTEEEEECCBCSSC----BCCEEEEEETTTTEEEEEEECSS------------------C
T ss_pred eecccCc-cCcccceEEEEECCEEEEEecCCCCe----ecceEEEEECCCCEEEECCCCCC------------------C
Confidence 8887654 79999999999999999999986543 36789999999999999988855 8
Q ss_pred ccceEEEE
Q 004198 328 RCRHASAS 335 (769)
Q Consensus 328 R~~hs~~~ 335 (769)
|.+|++|+
T Consensus 280 R~~~~~~~ 287 (288)
T d1zgka1 280 RSGVGVAV 287 (288)
T ss_dssp CBSCEEEE
T ss_pred cEeEEEEE
Confidence 99998876
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.3e-33 Score=290.81 Aligned_cols=267 Identities=18% Similarity=0.263 Sum_probs=230.1
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCC---C
Q 004198 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGP---A 121 (769)
Q Consensus 45 ~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~---~ 121 (769)
+..||||||.... ..+++++||+.+++|+++++ +|.+|++|++++++++|||+||... .
T Consensus 4 g~~iyv~GG~~~~---------------~~~~~~~yd~~t~~W~~~~~---~p~~R~~~~~~~~~~~iyv~GG~~~~~~~ 65 (288)
T d1zgka1 4 GRLIYTAGGYFRQ---------------SLSYLEAYNPSNGTWLRLAD---LQVPRSGLAGCVVGGLLYAVGGRNNSPDG 65 (288)
T ss_dssp CCCEEEECCBSSS---------------BCCCEEEEETTTTEEEECCC---CSSCCBSCEEEEETTEEEEECCEEEETTE
T ss_pred CCEEEEECCcCCC---------------CCceEEEEECCCCeEEECCC---CCCccceeEEEEECCEEEEEeCcccCCCC
Confidence 7799999997521 46899999999999999865 4889999999999999999999642 2
Q ss_pred CCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCC
Q 004198 122 GHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGD 201 (769)
Q Consensus 122 ~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~ 201 (769)
...++++|+||+.+ ++|.++ +++|.+|++|+++++++ ++|++||..+...+++++.||+.++ .|......
T Consensus 66 ~~~~~~~~~yd~~~--~~w~~~---~~~p~~r~~~~~~~~~~-~i~~~gg~~~~~~~~~~~~~~~~~~--~~~~~~~~-- 135 (288)
T d1zgka1 66 NTDSSALDCYNPMT--NQWSPC---APMSVPRNRIGVGVIDG-HIYAVGGSHGCIHHNSVERYEPERD--EWHLVAPM-- 135 (288)
T ss_dssp EEECCCEEEEETTT--TEEEEC---CCCSSCCBTCEEEEETT-EEEEECCEETTEECCCEEEEETTTT--EEEECCCC--
T ss_pred ccccchhhhccccc--cccccc---ccccceecceeccccce-eeEEecceecccccceeeeeccccC--cccccccc--
Confidence 34578999999999 789998 58999999999998886 8999999988888999999999998 99887665
Q ss_pred CCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCC
Q 004198 202 RPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGG 281 (769)
Q Consensus 202 ~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~ 281 (769)
|.+|..|+++.. ++.++++||.+.. ..+++++.|+..++ +|...... +.++..|+++..+++++++||.....
T Consensus 136 -~~~r~~~~~~~~-~~~~~~~GG~~~~-~~~~~~~~~d~~~~---~~~~~~~~-~~~~~~~~~~~~~~~i~i~GG~~~~~ 208 (288)
T d1zgka1 136 -LTRRIGVGVAVL-NRLLYAVGGFDGT-NRLNSAECYYPERN---EWRMITAM-NTIRSGAGVCVLHNCIYAAGGYDGQD 208 (288)
T ss_dssp -SSCCBSCEEEEE-TTEEEEECCBCSS-CBCCCEEEEETTTT---EEEECCCC-SSCCBSCEEEEETTEEEEECCBCSSS
T ss_pred -ccccccceeeee-eecceEecCcccc-cccceEEEeecccc---cccccccc-ccccccccccceeeeEEEecCccccc
Confidence 778888888765 7789999998654 45789999999866 78877655 68899999999999999999976543
Q ss_pred CcccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccCcccccceEEEEeCCEEEEEcCcCCCccccceEEecCC
Q 004198 282 RAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLDDFLVAENS 361 (769)
Q Consensus 282 ~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~~~~iyv~GG~~~~~~~~D~~~ld~~ 361 (769)
..++.+.||..+++|+.+...+. +|..|++++++++||||||.++...++++|++|.+
T Consensus 209 ----~~~~~~~~~~~~~~~~~~~~~p~------------------~r~~~~~~~~~~~l~v~GG~~~~~~~~~v~~yd~~ 266 (288)
T d1zgka1 209 ----QLNSVERYDVETETWTFVAPMKH------------------RRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPD 266 (288)
T ss_dssp ----BCCCEEEEETTTTEEEECCCCSS------------------CCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETT
T ss_pred ----cccceeeeeecceeeecccCccC------------------cccceEEEEECCEEEEEecCCCCeecceEEEEECC
Confidence 36789999999999999987644 99999999999999999999999999999999999
Q ss_pred CCccccC
Q 004198 362 PFQSDVN 368 (769)
Q Consensus 362 ~~~~~~~ 368 (769)
..+|...
T Consensus 267 ~~~W~~~ 273 (288)
T d1zgka1 267 TDTWSEV 273 (288)
T ss_dssp TTEEEEE
T ss_pred CCEEEEC
Confidence 8776543
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=99.96 E-value=2.3e-27 Score=258.24 Aligned_cols=304 Identities=15% Similarity=0.122 Sum_probs=211.5
Q ss_pred CCCCCCCcccccceeecCCCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCC
Q 004198 6 WLHPAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTR 85 (769)
Q Consensus 6 ~~~~~~~y~~~~~~w~~~~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~ 85 (769)
|.+++|. .+.|+...++|..|.+++++.. ++|||+|||......... ......+++||+.++
T Consensus 1 ~~~~~p~----~g~W~~~~~~p~~~~~~a~~~~------~gkv~v~GG~~~~~~~~~--------~~~~~~~~~yd~~t~ 62 (387)
T d1k3ia3 1 YTAPQPG----LGRWGPTIDLPIVPAAAAIEPT------SGRVLMWSSYRNDAFGGS--------PGGITLTSSWDPSTG 62 (387)
T ss_dssp CCCCCTT----SCEEEEEEECSSCCSEEEEETT------TTEEEEEEECCCTTTCSC--------CCSEEEEEEECTTTC
T ss_pred CCCCCCC----CCccCCcCCCCccccEEEEEee------CCEEEEEEeecCcccCCC--------CCceeEEEEEECCCC
Confidence 3455555 5569998888887776655555 889999999865432110 013446889999999
Q ss_pred cEEEecCCCCCCcccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCc
Q 004198 86 KWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQR 164 (769)
Q Consensus 86 ~W~~l~~~g~~P~~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~ 164 (769)
+|+.++... .|..+..++.+.. +++||++||.+ .+++++||+.+ .+|.++ +.+|.+|..|+++++.++
T Consensus 63 ~w~~~~~~~-~~~~~~~~~~~~~~~g~i~v~Gg~~-----~~~~~~yd~~~--~~w~~~---~~~~~~r~~~~~~~~~dG 131 (387)
T d1k3ia3 63 IVSDRTVTV-TKHDMFCPGISMDGNGQIVVTGGND-----AKKTSLYDSSS--DSWIPG---PDMQVARGYQSSATMSDG 131 (387)
T ss_dssp CBCCCEEEE-CSCCCSSCEEEECTTSCEEEECSSS-----TTCEEEEEGGG--TEEEEC---CCCSSCCSSCEEEECTTS
T ss_pred cEeecCCCC-CCcccceeEEEEecCCcEEEeecCC-----CcceeEecCcc--Cccccc---ccccccccccceeeecCC
Confidence 998765441 2333444444443 56999999864 35689999999 779988 689999999999999888
Q ss_pred EEEEEecCC-CCCccCceeEEeCCCCCceEEEcCCCCCC-----------------------------------------
Q 004198 165 YLVSVSGND-GKRVLSDAWALDTAQKPYVWQRLNPEGDR----------------------------------------- 202 (769)
Q Consensus 165 ~l~v~GG~~-~~~~~~dv~~~d~~~~~~~W~~v~~~~~~----------------------------------------- 202 (769)
++|++||.. ....++++++||+.++ +|+.++.....
T Consensus 132 ~v~v~GG~~~~~~~~~~v~~yd~~~~--~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~ 209 (387)
T d1k3ia3 132 RVFTIGGSWSGGVFEKNGEVYSPSSK--TWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYT 209 (387)
T ss_dssp CEEEECCCCCSSSCCCCEEEEETTTT--EEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEEC
T ss_pred ceeeeccccccccccceeeeecCCCC--ceeecCCCcccccccccccceeeccceeEEEEeCCCCEEEecCcCCcEEecC
Confidence 899999874 4557899999999999 99887542211
Q ss_pred -------------------CCcccccEEE-EecCCEEEEEcccCCCCCc--c--cceEEEecCCCCceEEEeCCCCCCCc
Q 004198 203 -------------------PSARMYATAS-ARSDGMFLLCGGRDASGAP--L--ADAYGLLMHRNGQWEWTLAPGVAPSP 258 (769)
Q Consensus 203 -------------------P~~r~~hsa~-~~~~g~l~v~GG~~~~~~~--l--~d~~~ld~~~~~~W~W~~~~~~~P~~ 258 (769)
+..+..+++. ...++++|++||....... . .++..+.......+.|.....+ |.+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~ 288 (387)
T d1k3ia3 210 SGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGL-YFA 288 (387)
T ss_dssp STTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCC-SSC
T ss_pred cccCcEeeccccccCcccCcccccccEEEeeccCCceEEEEeccCCCCCcccceeecccccccccCCCceeecccc-ccc
Confidence 1111112222 2257899999997554321 1 1222223333445678877655 789
Q ss_pred ccceEEEEe-CCEEEEEecccCCCCc--ccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccCcccccceEEEE
Q 004198 259 RYQHAAVFV-GARLHVTGGALRGGRA--IEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASAS 335 (769)
Q Consensus 259 R~~hs~~~~-~~~i~V~GG~~~~~~~--~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~ 335 (769)
|..|+++++ +++|||+||....... ......+++||+++++|+.+..++. +|.+|++++
T Consensus 289 r~~~~~~~~~dg~i~v~GG~~~~~~~~~~~~~~~ve~Ydp~~~~W~~~~~~~~------------------~R~~Hs~a~ 350 (387)
T d1k3ia3 289 RTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSI------------------VRVYHSISL 350 (387)
T ss_dssp CBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSS------------------CCCTTEEEE
T ss_pred cccceeeeccCCeEEEECCcccCccCCCCcEeceEEEEECCCCeEEECCCCCC------------------cccceEEEE
Confidence 999999988 6799999997643321 1225578999999999999988744 899999887
Q ss_pred e--CCEEEEEcCcCC---CccccceEEec
Q 004198 336 I--GVRIYIYGGLKG---DILLDDFLVAE 359 (769)
Q Consensus 336 ~--~~~iyv~GG~~~---~~~~~D~~~ld 359 (769)
+ +++|||+||... .....++.+++
T Consensus 351 l~~dG~v~v~GG~~~~~~~~~~~~~e~y~ 379 (387)
T d1k3ia3 351 LLPDGRVFNGGGGLCGDCTTNHFDAQIFT 379 (387)
T ss_dssp ECTTSCEEEEECCCCTTCSCCCCEEEEEE
T ss_pred ECCCCEEEEEeCCCcCCCCcccceEEEEc
Confidence 7 789999999632 23455666665
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=99.89 E-value=6.2e-22 Score=214.78 Aligned_cols=251 Identities=14% Similarity=0.180 Sum_probs=179.4
Q ss_pred CCCcccccceeecCCCCCCCcc--ccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcE
Q 004198 10 APSYRTLETYWDTDEDAPGPRC--GHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKW 87 (769)
Q Consensus 10 ~~~y~~~~~~w~~~~~~P~~R~--ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W 87 (769)
...||+.+++|...+.++.+|. .++.+.+ .++++|++||.. .+++++||+.+++|
T Consensus 54 ~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~-----~~g~i~v~Gg~~------------------~~~~~~yd~~~~~w 110 (387)
T d1k3ia3 54 TSSWDPSTGIVSDRTVTVTKHDMFCPGISMD-----GNGQIVVTGGND------------------AKKTSLYDSSSDSW 110 (387)
T ss_dssp EEEECTTTCCBCCCEEEECSCCCSSCEEEEC-----TTSCEEEECSSS------------------TTCEEEEEGGGTEE
T ss_pred EEEEECCCCcEeecCCCCCCcccceeEEEEe-----cCCcEEEeecCC------------------CcceeEecCccCcc
Confidence 3479999999998877766664 4444444 277999999854 35789999999999
Q ss_pred EEecCCCCCCcccccceEEEEC-CEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCC------------------
Q 004198 88 TRIRPAGEPPSPRAAHAAAAVG-TMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQ------------------ 148 (769)
Q Consensus 88 ~~l~~~g~~P~~R~~hs~~~~~-~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~------------------ 148 (769)
+.++. +|.+|..|+++.+. ++||++||........+++++||+.+ .+|..++....
T Consensus 111 ~~~~~---~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~--~~W~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (387)
T d1k3ia3 111 IPGPD---MQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS--KTWTSLPNAKVNPMLTADKQGLYRSDNHA 185 (387)
T ss_dssp EECCC---CSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTT--TEEEEETTSCSGGGCCCCTTGGGTTTCSC
T ss_pred ccccc---ccccccccceeeecCCceeeeccccccccccceeeeecCCC--CceeecCCCcccccccccccceeecccee
Confidence 98765 47899999999884 69999999877777889999999999 67988742100
Q ss_pred ------------------------------------------CCCCccccEEEEE-CCcEEEEEecCCCCCc---cCcee
Q 004198 149 ------------------------------------------GPGPRYGHVMDLV-SQRYLVSVSGNDGKRV---LSDAW 182 (769)
Q Consensus 149 ------------------------------------------~p~~R~~hs~~~~-~~~~l~v~GG~~~~~~---~~dv~ 182 (769)
.+..+.++++... .++++|++||...... .....
T Consensus 186 ~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~GG~~~~~~~~~~~~~~ 265 (387)
T d1k3ia3 186 WLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAH 265 (387)
T ss_dssp CEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEE
T ss_pred EEEEeCCCCEEEecCcCCcEEecCcccCcEeeccccccCcccCcccccccEEEeeccCCceEEEEeccCCCCCcccceee
Confidence 1222233333222 3458899999754321 22223
Q ss_pred EEeC---CCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCC-----CCcccceEEEecCCCCceEEEeCCCC
Q 004198 183 ALDT---AQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDAS-----GAPLADAYGLLMHRNGQWEWTLAPGV 254 (769)
Q Consensus 183 ~~d~---~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~-----~~~l~d~~~ld~~~~~~W~W~~~~~~ 254 (769)
.++. ......|..+..+ |.+|.+|++++..|++||++||.... ...+..++.||..++ +|..++.+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~---p~~r~~~~~~~~~dg~i~v~GG~~~~~~~~~~~~~~~ve~Ydp~~~---~W~~~~~~ 339 (387)
T d1k3ia3 266 IITLGEPGTSPNTVFASNGL---YFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD---TFYKQNPN 339 (387)
T ss_dssp EEECCSTTSCCEEEECTTCC---SSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT---EEEECCCC
T ss_pred cccccccccCCCceeecccc---ccccccceeeeccCCeEEEECCcccCccCCCCcEeceEEEEECCCC---eEEECCCC
Confidence 3322 2222256665544 88999999999999999999997532 234667899999877 88888655
Q ss_pred CCCcccceEEEEe--CCEEEEEecccCCCCcccCCCcEEEEECC
Q 004198 255 APSPRYQHAAVFV--GARLHVTGGALRGGRAIEGEAAVAVLDTA 296 (769)
Q Consensus 255 ~P~~R~~hs~~~~--~~~i~V~GG~~~~~~~~~~~~~v~~yd~~ 296 (769)
|.+|+.|+++++ +++|||+||...+.. .....++++|+|.
T Consensus 340 -~~~R~~Hs~a~l~~dG~v~v~GG~~~~~~-~~~~~~~e~y~Pp 381 (387)
T d1k3ia3 340 -SIVRVYHSISLLLPDGRVFNGGGGLCGDC-TTNHFDAQIFTPN 381 (387)
T ss_dssp -SSCCCTTEEEEECTTSCEEEEECCCCTTC-SCCCCEEEEEECG
T ss_pred -CCcccceEEEEECCCCEEEEEeCCCcCCC-CcccceEEEEcch
Confidence 799999998877 889999999654432 2235679999973
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Probab=99.75 E-value=6.1e-19 Score=176.63 Aligned_cols=122 Identities=28% Similarity=0.363 Sum_probs=92.9
Q ss_pred CCEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhh
Q 004198 581 APVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADI 660 (769)
Q Consensus 581 ~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~ 660 (769)
.+|+||||||||+++|.++|+.+++++..+ .+|||||||||||+|+||+.+|.. .++++|+||||.+.+
T Consensus 13 ~rI~vIgDIHG~~~~L~~lL~~i~~~~~~d-----~lv~lGD~vDrGp~s~~vl~~l~~------~~~~~i~GNHE~~ll 81 (219)
T d1g5ba_ 13 RNIWVVGDLHGCYTNLMNKLDTIGFDNKKD-----LLISVGDLVDRGAENVECLELITF------PWFRAVRGNHEQMMI 81 (219)
T ss_dssp SCEEEECCCTTCHHHHHHHHHHHTCCTTTC-----EEEECSCCSSSSSCHHHHHGGGGS------TTEEECCCHHHHHHH
T ss_pred CeEEEEEecccCHHHHHHHHHHcCCCCCCC-----EEEEeCCccccCccHHHHHHHhhc------cccccccCcHHHHHH
Confidence 479999999999999999999999865542 899999999999999999998754 589999999999998
Q ss_pred hhccCCHH-HHHHHhCCC-------CchhhhHHHhHhhccccceEEE---eceEEEEcCCCCCC
Q 004198 661 NALFGFRL-ECIERMGEN-------DGIWAWTRFNQLFNCLPLAALI---EKKIICMHGGIGRS 713 (769)
Q Consensus 661 ~~~~g~~~-e~~~~~~~~-------~~~~~~~~~~~~f~~lP~~~~i---~~~i~~vHgGi~~~ 713 (769)
+...+... +.....+.. ......+.+.+++..+|+...+ +.+++++|||+...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~h~~~~~~ 145 (219)
T d1g5ba_ 82 DGLSERGNVNHWLLNGGGWFFNLDYDKEILAKALAHKADELPLIIELVSKDKKYVICHADYPFD 145 (219)
T ss_dssp HHHSTTCCCHHHHTTTGGGGGGSCHHHHHHHHHHHHHHTTCCSEEEEEETTEEEEECSSCCCSS
T ss_pred HHHhccccccHHHHcCchHHhhcccchhHHHHHHHHHHHhCccccccccCCCcEEEEECCCchh
Confidence 87765431 111111110 0112234677888999988665 36899999998755
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.49 E-value=2.3e-14 Score=144.95 Aligned_cols=128 Identities=16% Similarity=0.075 Sum_probs=86.7
Q ss_pred CEEEEccCCCCHHHHHHHHHHhCCCCC-CCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhh
Q 004198 582 PVKVFGDLHGQFGDLMRLFDEYGFPST-AGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADI 660 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~~~l~~~~~~~~-~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~ 660 (769)
.|.|||||||++.+|.++|+.+..... ..+ .-.+||+||+||||+++.||+++|++|+.. .++++|+||||.+.+
T Consensus 2 ~I~visDiHg~~~~l~~~l~~i~~~~~~~~~--~D~ii~~GDlvd~G~~~~evi~~l~~l~~~--~~v~~v~GNHD~~~~ 77 (251)
T d1nnwa_ 2 YVAVLANIAGNLPALTAALSRIEEMREEGYE--IEKYYILGNIVGLFPYPKEVIEVIKDLTKK--ENVKIIRGKYDQIIA 77 (251)
T ss_dssp EEEEEECCTTCHHHHHHHHHHHHHHHHTTCC--EEEEEEESCSSSSSSCHHHHHHHHHHHHHH--SCEEEECCHHHHHHH
T ss_pred EEEEEEccccCHHHHHHHHHHHHHhhccCCC--CcEEEEecCcCCCCCCcHHHHHHHHHHhhc--CCEEEEeccHHHHHH
Confidence 489999999999999999987632110 000 017999999999999999999999998755 479999999998877
Q ss_pred hhccCCHHHHHHHhCCC----------CchhhhHHHhHhhccccceEEEe---ceEEEEcCCCCCC
Q 004198 661 NALFGFRLECIERMGEN----------DGIWAWTRFNQLFNCLPLAALIE---KKIICMHGGIGRS 713 (769)
Q Consensus 661 ~~~~g~~~e~~~~~~~~----------~~~~~~~~~~~~f~~lP~~~~i~---~~i~~vHgGi~~~ 713 (769)
....++........... ....+-....++++.+|...... .+++++||++...
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~H~~p~~~ 143 (251)
T d1nnwa_ 78 MSDPHATDPGYIDKLELPGHVKKALKFTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYGSPINP 143 (251)
T ss_dssp HSCTTCSSSGGGGGSSCCHHHHHHHHHHHHHHHHHHHHHHHTSCSCEEEEETTEEEEEESSCSSCT
T ss_pred hccccccccchhhhhccchhHHHhhHHHhhhcCHHHHHHHHhcccceEEeeCCCcEEEEecCccCc
Confidence 65443221110000000 00111234556788888776543 5899999987543
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Probab=98.89 E-value=7.2e-10 Score=109.14 Aligned_cols=73 Identities=10% Similarity=0.104 Sum_probs=60.5
Q ss_pred CEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhh
Q 004198 582 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADIN 661 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~ 661 (769)
.|.++|||||++++|.++++.+.....+ -+|++||++|||+.+.|+..++..|+... ..++.++||||.....
T Consensus 7 ~i~~~sd~hg~~eale~~~~~~~~~~~D------~vv~~GDl~~~~~~~~~~~~~~~~L~~~~-~pv~~i~GNHD~~~~~ 79 (228)
T d1uf3a_ 7 YILATSNPMGDLEALEKFVKLAPDTGAD------AIALIGNLMPKAAKSRDYAAFFRILSEAH-LPTAYVPGPQDAPIWE 79 (228)
T ss_dssp EEEEEECCTTCHHHHHHHHTHHHHHTCS------EEEEESCSSCTTCCHHHHHHHHHHHGGGC-SCEEEECCTTSCSHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHhhcCCC------EEEECCCCCCCCccchHHHHhhhhhcccc-ceEEEEecCCCchhhh
Confidence 4889999999999999999776433223 68999999999999999999998888653 3699999999976543
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=98.62 E-value=1.3e-08 Score=97.27 Aligned_cols=70 Identities=19% Similarity=0.343 Sum_probs=53.9
Q ss_pred CEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCCh--------HHHHHHHHHhhhcCCCceEEecC
Q 004198 582 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHS--------LETITLLLALKIEYPENVHLIRG 653 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s--------~e~l~ll~~lk~~~p~~v~llrG 653 (769)
+|.|||||||++.+|.++++.+.....+ .+|++||++|+|+.+ .+++..+..+ ...++.++|
T Consensus 3 ki~iiSDiHg~~~al~~vl~~~~~~~~D------~iv~~GDiv~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~G 72 (184)
T d1su1a_ 3 KLMFASDIHGSLPATERVLELFAQSGAQ------WLVILGDVLNHGPRNALPEGYAPAKVVERLNEV----AHKVIAVRG 72 (184)
T ss_dssp EEEEECCCTTBHHHHHHHHHHHHHHTCS------EEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTT----GGGEEECCC
T ss_pred EEEEEeecCCCHHHHHHHHHHHhhcCCC------EEEEcCcccccCccchhhhccCcHHHHHHHHhc----CCcEEEecC
Confidence 4899999999999999999877533333 799999999998754 4555555544 357999999
Q ss_pred Ccchhhhh
Q 004198 654 NHEAADIN 661 (769)
Q Consensus 654 NHE~~~~~ 661 (769)
|||.....
T Consensus 73 NhD~~~~~ 80 (184)
T d1su1a_ 73 NCDSEVDQ 80 (184)
T ss_dssp TTCCHHHH
T ss_pred CCCchhhh
Confidence 99975433
|
| >d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Putative phosphodiesterase MJ0936 species: Methanococcus jannaschii [TaxId: 2190]
Probab=98.39 E-value=1.6e-07 Score=87.93 Aligned_cols=62 Identities=16% Similarity=0.324 Sum_probs=47.2
Q ss_pred CEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchh
Q 004198 582 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAA 658 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~ 658 (769)
+|.|++||||++.+|.++++.+.....+ .++++||+++. +++..+..+. .+++.++||||..
T Consensus 2 kI~iiSDiHgn~~al~~vl~~~~~~~~D------~ii~~GD~~~~-----~~~~~l~~~~----~~~~~v~GN~D~~ 63 (165)
T d1s3la_ 2 KIGIMSDTHDHLPNIRKAIEIFNDENVE------TVIHCGDFVSL-----FVIKEFENLN----ANIIATYGNNDGE 63 (165)
T ss_dssp EEEEECCCTTCHHHHHHHHHHHHHSCCS------EEEECSCCCST-----HHHHHGGGCS----SEEEEECCTTCCC
T ss_pred EEEEEEeCCCCHHHHHHHHHHHHhcCCC------EEEECCCccCH-----HHHHHHhhcC----ccEEEEccccccc
Confidence 3889999999999999999876433323 78999999974 4555554443 4799999999964
|
| >d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Cryptosporidium parvum [TaxId: 5807]
Probab=98.15 E-value=1.2e-06 Score=83.98 Aligned_cols=100 Identities=22% Similarity=0.299 Sum_probs=65.7
Q ss_pred EEEEccCCCCHHH------HHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcc
Q 004198 583 VKVFGDLHGQFGD------LMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHE 656 (769)
Q Consensus 583 i~viGDiHG~~~~------l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE 656 (769)
|.||||+||+... +.++|+.-+ -+ .++++||++++ |++.+|..+. ..+++++||||
T Consensus 6 IlviSD~H~~~~~~~l~~~~~~~~~~~~---vD------~ii~~GDi~~~-----~~l~~l~~l~----~~v~~V~GN~D 67 (193)
T d2a22a1 6 VLLIGDLKIPYGAKELPSNFRELLATDK---IN------YVLCTGNVCSQ-----EYVEMLKNIT----KNVYIVSGDLD 67 (193)
T ss_dssp EEEECCCCTTTTCSSCCGGGHHHHHCTT---CC------EEEECSCCCCH-----HHHHHHHHHC----SCEEECCCTTC
T ss_pred EEEEeCCCCCcccchhhHHHHHHhccCC---CC------EEEECCCCCCH-----HHHHHHHhhC----CCEEEEcCCCC
Confidence 7899999986433 444554322 12 78999999964 8999988774 36899999999
Q ss_pred hhhhhhccCCHHHHHHHhCCCCchhhhHHHhHhhccccceEEEe---ceEEEEcCCCCCCCCChHHhhhc
Q 004198 657 AADINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIE---KKIICMHGGIGRSIHSVEQIEKL 723 (769)
Q Consensus 657 ~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~f~~lP~~~~i~---~~i~~vHgGi~~~~~~~~~i~~~ 723 (769)
...... ..++...||....+. .+++++||-........+.+..+
T Consensus 68 ~~~~~~-----------------------~~~~~~~lp~~~~~~~~~~~i~l~H~~~~~~~~~~~~l~~~ 114 (193)
T d2a22a1 68 SAIFNP-----------------------DPESNGVFPEYVVVQIGEFKIGLMHGNQVLPWDDPGSLEQW 114 (193)
T ss_dssp CSCCBC-----------------------CGGGTBCCCSEEEEEETTEEEEEECSTTSSSTTCHHHHHHH
T ss_pred cchhhh-----------------------hHHHHhhCCccEEEEECCEEEEEEeccCCCCCCCHHHHHHH
Confidence 643221 123345677665543 37899998665554555555443
|
| >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Uncharacterized protein SP1879 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.02 E-value=5.9e-06 Score=77.50 Aligned_cols=57 Identities=23% Similarity=0.281 Sum_probs=44.2
Q ss_pred CCEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcch
Q 004198 581 APVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEA 657 (769)
Q Consensus 581 ~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~ 657 (769)
..|.|++|+||++.+|.++++...- ..+ .++++||++..+...+ + ..++.++||||.
T Consensus 4 ~kI~viSD~Hgn~~al~~vl~~~~~-~~D------~iih~GD~~~~~~~~~--------~-----~~~~~V~GN~D~ 60 (173)
T d3ck2a1 4 QTIIVMSDSHGDSLIVEEVRDRYVG-KVD------AVFHNGDSELRPDSPL--------W-----EGIRVVKGNMDF 60 (173)
T ss_dssp EEEEEECCCTTCHHHHHHHHHHHTT-TSS------EEEECSCCCSCTTCGG--------G-----TTEEECCCTTCC
T ss_pred CEEEEEeccCCCHHHHHHHHHHhhc-CCC------EEEECCcccCcccchh--------h-----cCCeEEecCccc
Confidence 3589999999999999999987632 122 6889999998765431 1 378999999995
|
| >d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.00 E-value=5.6e-06 Score=78.32 Aligned_cols=61 Identities=28% Similarity=0.365 Sum_probs=42.7
Q ss_pred CEEEEccCCCCHHH--HHHHHHH-hCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcch
Q 004198 582 PVKVFGDLHGQFGD--LMRLFDE-YGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEA 657 (769)
Q Consensus 582 ~i~viGDiHG~~~~--l~~~l~~-~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~ 657 (769)
.|.||+|+||+... |.+.+.. +.....+ .++++||+++ .|++.+|..+. ..++.++||||.
T Consensus 2 kI~viSD~H~~~~~~~l~~~~~~~~~~~~~D------~Ii~~GDi~~-----~e~l~~l~~~~----~~v~~V~GN~D~ 65 (182)
T d1z2wa1 2 LVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQ------HILCTGNLCT-----KESYDYLKTLA----GDVHIVRGDFDE 65 (182)
T ss_dssp EEEEECCCCBTTTCSSCCHHHHTTCCTTSCS------EEEECSCCBS-----HHHHHHHHHHC----SEEEECCCTTCC
T ss_pred EEEEEeecCCCCcchhhHHHHHHHhcccCCC------EEEEccCccc-----hhhHHHHHhhC----CceEEEeCCcCc
Confidence 37899999997643 3233333 2211122 6888999995 69999988764 368999999995
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Probab=97.79 E-value=5.2e-06 Score=81.99 Aligned_cols=73 Identities=12% Similarity=0.103 Sum_probs=51.8
Q ss_pred cCCEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHH----------------------
Q 004198 580 RAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLL---------------------- 637 (769)
Q Consensus 580 ~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll---------------------- 637 (769)
..+|.+++|||++++.|.++++.+.-...+ -+|+.||++|.+..+.+...+.
T Consensus 2 ~~ri~~isD~h~~~~~l~~l~~~~~~~~~D------~vli~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~d~~~~ 75 (257)
T d2yvta1 2 PRKVLAIKNFKERFDLLPKLKGVIAEKQPD------ILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETL 75 (257)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCS------EEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHhhcCCC------EEEEecccCCCCCCCHHHHHHHHhhhhhceeeeccccccchhhH
Confidence 346999999999999999888766432222 5888999999887665433222
Q ss_pred ----HHhhhcCCCceEEecCCcchhh
Q 004198 638 ----LALKIEYPENVHLIRGNHEAAD 659 (769)
Q Consensus 638 ----~~lk~~~p~~v~llrGNHE~~~ 659 (769)
..|+ ..+-.++++.||||...
T Consensus 76 ~~~~~~L~-~~~~pv~~i~GNHD~~~ 100 (257)
T d2yvta1 76 DKFFREIG-ELGVKTFVVPGKNDAPL 100 (257)
T ss_dssp HHHHHHHH-TTCSEEEEECCTTSCCH
T ss_pred HHHHHHHH-hcCCcEEEEeCCCcchh
Confidence 2222 33457999999999653
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=96.86 E-value=0.00058 Score=64.32 Aligned_cols=39 Identities=26% Similarity=0.328 Sum_probs=29.9
Q ss_pred eEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchh
Q 004198 616 DYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAA 658 (769)
Q Consensus 616 ~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~ 658 (769)
.+++|||+..+....-+.+.+|..|. .+.++|+||||..
T Consensus 46 ~v~~LGD~~~~~~~~~~~~~~l~~L~----g~~~lI~GNHD~~ 84 (188)
T d1xm7a_ 46 TLYHLGDFTWHFNDKNEYLRIWKALP----GRKILVMGNHDKD 84 (188)
T ss_dssp EEEECSCCBSCSCCTTSHHHHHHHSS----SEEEEECCTTCCC
T ss_pred EEEEeCCccccCCCHHHHHHHHHHCC----CceEEEecCCCch
Confidence 68889999876544556677777664 6889999999963
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Probab=96.58 E-value=0.0019 Score=64.13 Aligned_cols=70 Identities=20% Similarity=0.219 Sum_probs=45.7
Q ss_pred EEEEccCC---------CC---HHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEE
Q 004198 583 VKVFGDLH---------GQ---FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHL 650 (769)
Q Consensus 583 i~viGDiH---------G~---~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~l 650 (769)
|..|+|+| |. ...|.++++.+......-| -+|+.||++|+|. .+.+..+.++-.+.+-.+++
T Consensus 3 i~hiSD~Hl~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~D----~vv~~GDl~~~~~--~~~y~~~~~~l~~l~~p~~~ 76 (271)
T d3d03a1 3 LAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPD----AVVVSGDIVNCGR--PEEYQVARQILGSLNYPLYL 76 (271)
T ss_dssp EEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCS----EEEEESCCBSSCC--HHHHHHHHHHHTTCSSCEEE
T ss_pred EEEEecCcCCCCccccccCcCHHHHHHHHHHHHHhcCCCCC----EEEECcccCcCCc--chhHHHHHHHHhccCCCEEE
Confidence 78899999 21 2446667666532211111 5788999999875 34455555444455667999
Q ss_pred ecCCcchh
Q 004198 651 IRGNHEAA 658 (769)
Q Consensus 651 lrGNHE~~ 658 (769)
+.||||..
T Consensus 77 i~GNHD~~ 84 (271)
T d3d03a1 77 IPGNHDDK 84 (271)
T ss_dssp ECCTTSCH
T ss_pred EecCccch
Confidence 99999964
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=96.37 E-value=0.0021 Score=65.10 Aligned_cols=71 Identities=23% Similarity=0.229 Sum_probs=45.6
Q ss_pred CEEEEccCC-C------------CHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhh---hcCC
Q 004198 582 PVKVFGDLH-G------------QFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALK---IEYP 645 (769)
Q Consensus 582 ~i~viGDiH-G------------~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk---~~~p 645 (769)
+++.++|+| | ++..|.++++.+.-...+ -+|+.||++|++.-+.+++..+..+. ....
T Consensus 2 kilh~SDlHlG~~~~~~~~~~~~~~~~l~~iv~~a~~~~~D------~vli~GDlfd~~~~~~~~~~~~~~~~~~l~~~~ 75 (333)
T d1ii7a_ 2 KFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVD------FILIAGDLFHSSRPSPGTLKKAIALLQIPKEHS 75 (333)
T ss_dssp EEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCS------EEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTT
T ss_pred EEEEEecCcCCCCCcCchhHHHHHHHHHHHHHHHHHHcCCC------EEEECCCCCCCCCCCHHHHHHHHHHHhhHHhcC
Confidence 378999999 3 234455555544321111 57889999998877777665543322 1234
Q ss_pred CceEEecCCcchh
Q 004198 646 ENVHLIRGNHEAA 658 (769)
Q Consensus 646 ~~v~llrGNHE~~ 658 (769)
-.++++.||||..
T Consensus 76 i~v~~i~GNHD~~ 88 (333)
T d1ii7a_ 76 IPVFAIEGNHDRT 88 (333)
T ss_dssp CCEEEECCTTTCC
T ss_pred CcEEEeCCCCccc
Confidence 5699999999964
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.83 E-value=0.0047 Score=60.45 Aligned_cols=70 Identities=19% Similarity=0.273 Sum_probs=43.2
Q ss_pred EEEEccCCCC------------HHHHHHHHHHhCC--CCCCCCCcceeEEEeccccCCCCCh-HH-HHHHHHHhhhcCCC
Q 004198 583 VKVFGDLHGQ------------FGDLMRLFDEYGF--PSTAGDITYIDYLFLGDYVDRGQHS-LE-TITLLLALKIEYPE 646 (769)
Q Consensus 583 i~viGDiHG~------------~~~l~~~l~~~~~--~~~~~~~~~~~~vfLGD~vDrG~~s-~e-~l~ll~~lk~~~p~ 646 (769)
++.|+|||=. ...|.++++.+.. +..+ -+|..||+++.|... .+ ...++..+....+-
T Consensus 7 i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~pD------~vl~~GDl~~~g~~~~~~~~~~~l~~~~~~~~~ 80 (256)
T d2hy1a1 7 LLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPD------AIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGA 80 (256)
T ss_dssp EEEECCCCBC----------CHHHHHHHHHHHHHHHTCCCS------EEEECSCCBSSCCHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEeeCccCCCCcccccCcCHHHHHHHHHHHHHhcCCCCC------EEEECCCCCCCCChhHHHHHHHHhhhhhhhcCC
Confidence 8899999931 2446666665431 1111 567799999988643 12 22334334334456
Q ss_pred ceEEecCCcchh
Q 004198 647 NVHLIRGNHEAA 658 (769)
Q Consensus 647 ~v~llrGNHE~~ 658 (769)
.+++++||||..
T Consensus 81 p~~~v~GNHD~~ 92 (256)
T d2hy1a1 81 ELVWVMGNHDDR 92 (256)
T ss_dssp EEEECCCTTSCH
T ss_pred CEEEEcccccch
Confidence 899999999953
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Probab=95.09 E-value=0.0095 Score=58.95 Aligned_cols=70 Identities=20% Similarity=0.172 Sum_probs=45.3
Q ss_pred EEEEccCCCC-------------------HHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCC----ChHHHHHHHHH
Q 004198 583 VKVFGDLHGQ-------------------FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQ----HSLETITLLLA 639 (769)
Q Consensus 583 i~viGDiHG~-------------------~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~----~s~e~l~ll~~ 639 (769)
+.+|+|+|=. ...|.++++.+.....+ -+|++||++|.+. ...+.+..+..
T Consensus 6 f~~isD~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~i~~~~~D------fVv~~GDl~~~~~~~~~~~~~~~~~~~~ 79 (320)
T d2nxfa1 6 FGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQ------CVVQLGDIIDGHNRRRDASDRALDTVMA 79 (320)
T ss_dssp EEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCS------EEEECSCCBCTHHHHTTCHHHHHHHHHH
T ss_pred EEEEecCCCCCCCCccccccccchhhHHHHHHHHHHHHHHhhCCCC------EEEECCCCCCCCCcchhHHHHHHHHHHH
Confidence 8899999932 33455555544322222 5788999999752 34455555544
Q ss_pred hhhcCCCceEEecCCcchh
Q 004198 640 LKIEYPENVHLIRGNHEAA 658 (769)
Q Consensus 640 lk~~~p~~v~llrGNHE~~ 658 (769)
.-...+..++.+.||||..
T Consensus 80 ~~~~~~~p~~~v~GNHD~~ 98 (320)
T d2nxfa1 80 ELDACSVDVHHVWGNHEFY 98 (320)
T ss_dssp HHHTTCSEEEECCCHHHHH
T ss_pred HHHHcCCCEEEecccCccc
Confidence 4345567899999999964
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=94.49 E-value=3.9 Score=43.72 Aligned_cols=115 Identities=17% Similarity=0.147 Sum_probs=67.0
Q ss_pred CCcEEEEECCCCc--EEEecCCCCC-----CcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeec
Q 004198 74 TNSVHLYDVLTRK--WTRIRPAGEP-----PSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQ 146 (769)
Q Consensus 74 ~~dv~~yD~~~~~--W~~l~~~g~~-----P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~ 146 (769)
.+.++++|..+++ |+.-...... ......-+.+..+++||+... ...++++|..+.+..|+.-...
T Consensus 86 ~~~v~AlDa~TG~~~W~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~t~-------~g~l~alda~tG~~~W~~~~~~ 158 (573)
T d1kb0a2 86 WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW-------DGRLIALDAATGKEVWHQNTFE 158 (573)
T ss_dssp GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEETTT
T ss_pred CCeEEEEeCCCCCeEEEeCCCCCcccccccccccccccceEECCcEEEEec-------ccceeeeccccccceecccCcc
Confidence 3579999999885 8853221100 011222345666888887542 2459999999988889875321
Q ss_pred CCCCCCccccEEEEECCcEEEEEecCC-CCCccCceeEEeCCCCCceEEEcC
Q 004198 147 GQGPGPRYGHVMDLVSQRYLVSVSGND-GKRVLSDAWALDTAQKPYVWQRLN 197 (769)
Q Consensus 147 g~~p~~R~~hs~~~~~~~~l~v~GG~~-~~~~~~dv~~~d~~~~~~~W~~v~ 197 (769)
+....-....+.+++++ .+|+ |+.. .......|..||..+....|+.-.
T Consensus 159 ~~~~~~~~~~~p~v~~~-~viv-g~~~~~~~~~G~v~a~D~~TG~~~W~~~t 208 (573)
T d1kb0a2 159 GQKGSLTITGAPRVFKG-KVII-GNGGAEYGVRGYITAYDAETGERKWRWFS 208 (573)
T ss_dssp TCCSSCBCCSCCEEETT-EEEE-CCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCcceEEeecceEEEec-cEEE-eeccccccccceEEEEecCCccceeeeee
Confidence 22111111223334555 5554 4432 223346799999999988887643
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=94.21 E-value=2.9 Score=44.63 Aligned_cols=131 Identities=15% Similarity=0.064 Sum_probs=78.5
Q ss_pred cEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCc--EEEecCCCC-----CCcccccceE
Q 004198 33 HTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRK--WTRIRPAGE-----PPSPRAAHAA 105 (769)
Q Consensus 33 ht~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~--W~~l~~~g~-----~P~~R~~hs~ 105 (769)
.+-+++ +++||+..+ .+.++++|..+++ |+.-+.... ..........
T Consensus 60 stPiv~------~g~vyv~t~--------------------~~~v~AlDa~tG~~lW~~~~~~~~~~~~~~~~~~~~~~~ 113 (560)
T d1kv9a2 60 ATPLFH------DGVIYTSMS--------------------WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGV 113 (560)
T ss_dssp CCCEEE------TTEEEEEEG--------------------GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCC
T ss_pred eCCEEE------CCEEEEECC--------------------CCeEEEEeCCCCCEEEEECCCCCccccccccccccccCc
Confidence 455666 889998653 3679999999885 985322110 0111122345
Q ss_pred EEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEe
Q 004198 106 AAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALD 185 (769)
Q Consensus 106 ~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d 185 (769)
+..+++||+... ...++.+|..+.+..|..-.. ..........+..+.++ .+|+.+..........+..||
T Consensus 114 ~~~~~~v~~~~~-------~g~l~Alda~tG~~~w~~~~~-~~~~~~~~~~~p~v~~~-~vivg~~~~~~~~~G~v~a~D 184 (560)
T d1kv9a2 114 ALWGDKVYVGTL-------DGRLIALDAKTGKAIWSQQTT-DPAKPYSITGAPRVVKG-KVIIGNGGAEYGVRGFVSAYD 184 (560)
T ss_dssp EEEBTEEEEECT-------TSEEEEEETTTCCEEEEEECS-CTTSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEE
T ss_pred ceeCCeEEEEeC-------CCEEEEEECCCCcEEeccCcc-CcccceeeeeeeeeecC-cccccccceeccccceEEEEE
Confidence 566778887653 245999999998888876532 12222222223334554 555533322333446799999
Q ss_pred CCCCCceEEEcCC
Q 004198 186 TAQKPYVWQRLNP 198 (769)
Q Consensus 186 ~~~~~~~W~~v~~ 198 (769)
.++.+..|+.-..
T Consensus 185 ~~TG~~~W~~~t~ 197 (560)
T d1kv9a2 185 ADTGKLAWRFYTV 197 (560)
T ss_dssp TTTCCEEEEEESS
T ss_pred CCCceEEeeeeec
Confidence 9999988987543
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=92.72 E-value=3.6 Score=40.20 Aligned_cols=210 Identities=10% Similarity=0.044 Sum_probs=104.5
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccccceEEEE--CCEEEEECccCCCC
Q 004198 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAG 122 (769)
Q Consensus 45 ~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~ 122 (769)
++.+|+......... ...+.++++|+.++.+............-..++++.. ++.+|+..+.
T Consensus 28 dG~ly~~~~~~~~~~------------~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~---- 91 (314)
T d1pjxa_ 28 NGDFYIVAPEVEVNG------------KPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR---- 91 (314)
T ss_dssp TSCEEEEETTCEETT------------EECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT----
T ss_pred CCCEEEEECcccccc------------ccCCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEECC----
Confidence 667888755432111 0346799999999998876532101111112344443 3578876542
Q ss_pred CCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEe--cCC--------CCCccCceeEEeCCCCCce
Q 004198 123 HSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVS--GND--------GKRVLSDAWALDTAQKPYV 192 (769)
Q Consensus 123 ~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~G--G~~--------~~~~~~dv~~~d~~~~~~~ 192 (769)
+.+.++|+... ....+.........+.-..+++..++.+|+.- +.. .......+|++++...
T Consensus 92 ---~~i~~~~~~g~--~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~dg~--- 163 (314)
T d1pjxa_ 92 ---LGLLVVQTDGT--FEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQ--- 163 (314)
T ss_dssp ---TEEEEEETTSC--EEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSC---
T ss_pred ---CeEEEEeCCCc--EEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeecCc---
Confidence 34889998762 23333211111111222345555666788752 211 1123446888887653
Q ss_pred EEEcCCCCCCCCcccccEEEEecCC-----EEEEEcccCCCCCcccceEEEecCCCCceEEE----eCCCCCCCcccceE
Q 004198 193 WQRLNPEGDRPSARMYATASARSDG-----MFLLCGGRDASGAPLADAYGLLMHRNGQWEWT----LAPGVAPSPRYQHA 263 (769)
Q Consensus 193 W~~v~~~~~~P~~r~~hsa~~~~~g-----~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~----~~~~~~P~~R~~hs 263 (769)
+..+... ...- ...+...++ .||+..- ....+|+|+...++.-.+. ..++.. ...-.+
T Consensus 164 ~~~~~~~----~~~p-NGi~~~~d~d~~~~~lyv~d~------~~~~i~~~d~~~~g~~~~~~~~~~~~~~~--~~~pdG 230 (314)
T d1pjxa_ 164 MIQVDTA----FQFP-NGIAVRHMNDGRPYQLIVAET------PTKKLWSYDIKGPAKIENKKVWGHIPGTH--EGGADG 230 (314)
T ss_dssp EEEEEEE----ESSE-EEEEEEECTTSCEEEEEEEET------TTTEEEEEEEEETTEEEEEEEEEECCCCS--SCEEEE
T ss_pred eeEeeCC----ccee-eeeEECCCCCcceeEEEEEee------cccceEEeeccCccccceeeEEEEccccc--ccccee
Confidence 4444321 0111 112222222 4666431 2467888887655443332 222221 111234
Q ss_pred EEE-eCCEEEEEecccCCCCcccCCCcEEEEECCCCcE
Q 004198 264 AVF-VGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVW 300 (769)
Q Consensus 264 ~~~-~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W 300 (769)
+++ .++.|||..-. .+.|++||+++.+-
T Consensus 231 iavD~~GnlyVa~~~---------~g~I~~~dp~~g~~ 259 (314)
T d1pjxa_ 231 MDFDEDNNLLVANWG---------SSHIEVFGPDGGQP 259 (314)
T ss_dssp EEEBTTCCEEEEEET---------TTEEEEECTTCBSC
T ss_pred eEEecCCcEEEEEcC---------CCEEEEEeCCCCEE
Confidence 444 36788886321 24599999987653
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=92.32 E-value=4.2 Score=39.19 Aligned_cols=109 Identities=8% Similarity=0.032 Sum_probs=53.6
Q ss_pred CcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCC
Q 004198 163 QRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHR 242 (769)
Q Consensus 163 ~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~ 242 (769)
++.+++.|+.++ .+.+||..+. +-...... ....-.+.....++.+++.|+.++ .+..++...
T Consensus 158 ~~~~l~sgs~d~-----~i~i~d~~~~--~~~~~~~~----~~~~i~~v~~~p~~~~l~~~~~d~------~v~~~d~~~ 220 (311)
T d1nr0a1 158 RPFRIISGSDDN-----TVAIFEGPPF--KFKSTFGE----HTKFVHSVRYNPDGSLFASTGGDG------TIVLYNGVD 220 (311)
T ss_dssp SSCEEEEEETTS-----CEEEEETTTB--EEEEEECC----CSSCEEEEEECTTSSEEEEEETTS------CEEEEETTT
T ss_pred ceeeeccccccc-----cccccccccc--cccccccc----ccccccccccCccccccccccccc------ccccccccc
Confidence 335667777654 4778888775 32222111 111123444456777777776543 344555543
Q ss_pred CCceEEEeCCCCCCCcccce-----EEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCcE
Q 004198 243 NGQWEWTLAPGVAPSPRYQH-----AAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVW 300 (769)
Q Consensus 243 ~~~W~W~~~~~~~P~~R~~h-----s~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W 300 (769)
. .-... .... .....+| ++++. ++..++.||.. ..+.+||..+++-
T Consensus 221 ~-~~~~~-~~~~-~~~~~~h~~~V~~~~~s~~~~~l~tgs~D---------g~v~iwd~~t~~~ 272 (311)
T d1nr0a1 221 G-TKTGV-FEDD-SLKNVAHSGSVFGLTWSPDGTKIASASAD---------KTIKIWNVATLKV 272 (311)
T ss_dssp C-CEEEE-CBCT-TSSSCSSSSCEEEEEECTTSSEEEEEETT---------SEEEEEETTTTEE
T ss_pred c-ccccc-cccc-ccccccccccccccccCCCCCEEEEEeCC---------CeEEEEECCCCcE
Confidence 2 11111 1111 1111222 22222 56677777742 3488999988753
|
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=92.15 E-value=0.089 Score=52.77 Aligned_cols=68 Identities=22% Similarity=0.152 Sum_probs=40.0
Q ss_pred EEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccC-CCC---Ch---HHHHHHHHHhhhcCCCceEEecCCc
Q 004198 583 VKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVD-RGQ---HS---LETITLLLALKIEYPENVHLIRGNH 655 (769)
Q Consensus 583 i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vD-rG~---~s---~e~l~ll~~lk~~~p~~v~llrGNH 655 (769)
+.|+||++........+.........- + -+|++||++- .|. .. -+-+..+..+....| ++.++|||
T Consensus 10 F~v~GD~g~~~~~~~~~~~~~~~~~~p-d----fvl~~GDl~Y~~~~~~~~~~~wd~~~~~~~~~~~~~P--~~~~~GNH 82 (312)
T d2qfra2 10 FGLIGDLGQSFDSNTTLSHYELSPKKG-Q----TVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQP--WIWTAGNH 82 (312)
T ss_dssp EEEECSCCSBHHHHHHHHHHHHCSSCC-S----EEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSC--EEECCCGG
T ss_pred EEEEeeCCCCCchHHHHHHHHHcCCCC-C----EEEECCCCCcCCCCcccchHHHHHHHHHHHHHhhcce--EEEecccc
Confidence 789999988777665554432211111 1 4677999972 222 11 133444444443344 78999999
Q ss_pred ch
Q 004198 656 EA 657 (769)
Q Consensus 656 E~ 657 (769)
|.
T Consensus 83 D~ 84 (312)
T d2qfra2 83 EI 84 (312)
T ss_dssp GT
T ss_pred cc
Confidence 95
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=91.45 E-value=0.023 Score=56.12 Aligned_cols=43 Identities=28% Similarity=0.261 Sum_probs=23.6
Q ss_pred eEEEecccc-CCCCChH------HHHHHHHHhhhcCCCceEEecCCcchh
Q 004198 616 DYLFLGDYV-DRGQHSL------ETITLLLALKIEYPENVHLIRGNHEAA 658 (769)
Q Consensus 616 ~~vfLGD~v-DrG~~s~------e~l~ll~~lk~~~p~~v~llrGNHE~~ 658 (769)
-+|++||+| +.|..+. +.+..++.......--++.+.||||..
T Consensus 44 fvl~~GD~vy~~g~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 93 (302)
T d1utea_ 44 FILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHL 93 (302)
T ss_dssp EEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTTCCEEECCCHHHHH
T ss_pred EEEECCCCCCCCCCCcccHHHHHHHHHHHhhhhhhcCCceEEeecccccc
Confidence 578899999 3443221 112111111122334689999999953
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.65 E-value=8.3 Score=36.98 Aligned_cols=177 Identities=16% Similarity=0.163 Sum_probs=79.3
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
+.+..||+...+.+...... ..........+ ++.+++.|+. ...+..+|+.+.. -.... ... .
T Consensus 119 g~i~iwd~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~s~~~------d~~i~~~~~~~~~--~~~~~---~~~-~ 183 (337)
T d1gxra_ 119 STLSIWDLAAPTPRIKAELT---SSAPACYALAISPDSKVCFSCCS------DGNIAVWDLHNQT--LVRQF---QGH-T 183 (337)
T ss_dssp SEEEEEECCCC--EEEEEEE---CSSSCEEEEEECTTSSEEEEEET------TSCEEEEETTTTE--EEEEE---CCC-S
T ss_pred cccccccccccccccccccc---ccccccccccccccccccccccc------ccccccccccccc--ccccc---ccc-c
Confidence 46888888776654433210 00111112222 3445555542 2348889988742 22221 111 1
Q ss_pred ccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcc
Q 004198 153 RYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPL 232 (769)
Q Consensus 153 R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l 232 (769)
..-.+++...+...++.|+.++ .+.+||+.+.. .-..... ...-.+.....++.+++.|+.++
T Consensus 184 ~~v~~l~~s~~~~~~~~~~~d~-----~v~i~d~~~~~-~~~~~~~------~~~i~~l~~~~~~~~l~~~~~d~----- 246 (337)
T d1gxra_ 184 DGASCIDISNDGTKLWTGGLDN-----TVRSWDLREGR-QLQQHDF------TSQIFSLGYCPTGEWLAVGMESS----- 246 (337)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----EEEEEETTTTE-EEEEEEC------SSCEEEEEECTTSSEEEEEETTS-----
T ss_pred cccccccccccccccccccccc-----cccccccccce-eeccccc------ccceEEEEEcccccccceecccc-----
Confidence 1112232334445666666543 47788887761 1111111 11112333345666666666532
Q ss_pred cceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCc
Q 004198 233 ADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGV 299 (769)
Q Consensus 233 ~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~ 299 (769)
.+..++........ .... .... .++++. +++.++.|+.. ..+.+||..+++
T Consensus 247 -~i~i~d~~~~~~~~--~~~~---~~~i-~~v~~s~~g~~l~s~s~D---------g~i~iwd~~~~~ 298 (337)
T d1gxra_ 247 -NVEVLHVNKPDKYQ--LHLH---ESCV-LSLKFAYCGKWFVSTGKD---------NLLNAWRTPYGA 298 (337)
T ss_dssp -CEEEEETTSSCEEE--ECCC---SSCE-EEEEECTTSSEEEEEETT---------SEEEEEETTTCC
T ss_pred -cccccccccccccc--cccc---cccc-ceEEECCCCCEEEEEeCC---------CeEEEEECCCCC
Confidence 35556655442221 1111 1111 122222 56667777632 347889887653
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=85.60 E-value=2.6 Score=39.77 Aligned_cols=114 Identities=11% Similarity=0.058 Sum_probs=56.7
Q ss_pred EECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEe
Q 004198 160 LVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLL 239 (769)
Q Consensus 160 ~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld 239 (769)
...+..+++.|+.++ .+..||+.+. +...+.... ....-.+.....++.+++.|+.++ .++.++
T Consensus 144 ~s~~~~~l~~g~~dg-----~i~~~d~~~~--~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~d~------~i~~~~ 207 (299)
T d1nr0a2 144 LSNDKQFVAVGGQDS-----KVHVYKLSGA--SVSEVKTIV---HPAEITSVAFSNNGAFLVATDQSR------KVIPYS 207 (299)
T ss_dssp ECTTSCEEEEEETTS-----EEEEEEEETT--EEEEEEEEE---CSSCEEEEEECTTSSEEEEEETTS------CEEEEE
T ss_pred ccccccccccccccc-----cccccccccc--ccccccccc---cccccccccccccccccccccccc------cccccc
Confidence 334556777777654 4778888766 333322110 011112333446666777776532 466777
Q ss_pred cCCCCceEEEeCCCCCCCcccc-eEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCcEE
Q 004198 240 MHRNGQWEWTLAPGVAPSPRYQ-HAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWL 301 (769)
Q Consensus 240 ~~~~~~W~W~~~~~~~P~~R~~-hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~ 301 (769)
..+. ............... .++++. ++.+++.||.. ..+.+||..+....
T Consensus 208 ~~~~---~~~~~~~~~~~h~~~v~~l~~s~~~~~l~sgs~d---------g~i~iwd~~~~~~~ 259 (299)
T d1nr0a2 208 VANN---FELAHTNSWTFHTAKVACVSWSPDNVRLATGSLD---------NSVIVWNMNKPSDH 259 (299)
T ss_dssp GGGT---TEESCCCCCCCCSSCEEEEEECTTSSEEEEEETT---------SCEEEEETTCTTSC
T ss_pred cccc---ccccccccccccccccccccccccccceEEEcCC---------CEEEEEECCCCCcc
Confidence 6544 122111111111111 122332 66777787743 34889998776543
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=84.92 E-value=17 Score=34.56 Aligned_cols=191 Identities=12% Similarity=0.003 Sum_probs=92.8
Q ss_pred CCcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeec-CCCCCC
Q 004198 74 TNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQ-GQGPGP 152 (769)
Q Consensus 74 ~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~-g~~p~~ 152 (769)
.+.+++||+.+++-+..... . +.+..+..-++.+++... +.+++||+.+ .+++.+... ...+..
T Consensus 39 ~~~I~r~d~~~g~~~~~~~~----~-~~~~i~~~~dg~l~va~~--------~gl~~~d~~t--g~~~~l~~~~~~~~~~ 103 (295)
T d2ghsa1 39 ERELHELHLASGRKTVHALP----F-MGSALAKISDSKQLIASD--------DGLFLRDTAT--GVLTLHAELESDLPGN 103 (295)
T ss_dssp GTEEEEEETTTTEEEEEECS----S-CEEEEEEEETTEEEEEET--------TEEEEEETTT--CCEEEEECSSTTCTTE
T ss_pred CCEEEEEECCCCeEEEEECC----C-CcEEEEEecCCCEEEEEe--------CccEEeeccc--ceeeEEeeeecCCCcc
Confidence 46799999999876554321 1 112222233567776432 3499999998 456666421 222222
Q ss_pred ccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCC-EEEEEcccCCCCCc
Q 004198 153 RYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDG-MFLLCGGRDASGAP 231 (769)
Q Consensus 153 R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g-~l~v~GG~~~~~~~ 231 (769)
|... +.+..++.+++..... ......-..|....+ +...+... .... ...+...++ .+|+..- .
T Consensus 104 ~~nd-~~vd~~G~iw~~~~~~-~~~~~~g~l~~~~~g--~~~~~~~~----~~~~-Ng~~~s~d~~~l~~~dt------~ 168 (295)
T d2ghsa1 104 RSND-GRMHPSGALWIGTMGR-KAETGAGSIYHVAKG--KVTKLFAD----ISIP-NSICFSPDGTTGYFVDT------K 168 (295)
T ss_dssp EEEE-EEECTTSCEEEEEEET-TCCTTCEEEEEEETT--EEEEEEEE----ESSE-EEEEECTTSCEEEEEET------T
T ss_pred ccee-eEECCCCCEEEEeccc-cccccceeEeeecCC--cEEEEeec----cCCc-ceeeecCCCceEEEeec------c
Confidence 3333 3344455666643221 112223333433344 44444321 1111 122223333 5665431 2
Q ss_pred ccceEEEecCCC------CceEEEeCCCCCCCcccceEEEE-eCCEEEEEecccCCCCcccCCCcEEEEECCCCcEEecc
Q 004198 232 LADAYGLLMHRN------GQWEWTLAPGVAPSPRYQHAAVF-VGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRN 304 (769)
Q Consensus 232 l~d~~~ld~~~~------~~W~W~~~~~~~P~~R~~hs~~~-~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~ 304 (769)
...+|.|+.+.+ ....+...++... .-.++++ .++.|||..= . ...|.+||++......+.
T Consensus 169 ~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g---~pdG~~vD~~GnlWva~~-~--------~g~V~~~dp~G~~~~~i~ 236 (295)
T d2ghsa1 169 VNRLMRVPLDARTGLPTGKAEVFIDSTGIKG---GMDGSVCDAEGHIWNARW-G--------EGAVDRYDTDGNHIARYE 236 (295)
T ss_dssp TCEEEEEEBCTTTCCBSSCCEEEEECTTSSS---EEEEEEECTTSCEEEEEE-T--------TTEEEEECTTCCEEEEEE
T ss_pred cceeeEeeecccccccccceEEEeccCcccc---cccceEEcCCCCEEeeee-C--------CCceEEecCCCcEeeEec
Confidence 355777776432 1223333332211 2234444 3677887621 0 124999999888877765
Q ss_pred CC
Q 004198 305 GL 306 (769)
Q Consensus 305 ~~ 306 (769)
..
T Consensus 237 lP 238 (295)
T d2ghsa1 237 VP 238 (295)
T ss_dssp CS
T ss_pred CC
Confidence 43
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.07 E-value=16 Score=33.71 Aligned_cols=143 Identities=12% Similarity=0.131 Sum_probs=67.5
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCcc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRY 154 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~ 154 (769)
+.+..||+...+-....... ...-.++..-++. ++.|+. ...+.+||..+.. ....+. .......
T Consensus 197 g~i~~~d~~~~~~~~~~~~~----~~~v~~~~~~~~~-l~s~s~------d~~i~iwd~~~~~-~~~~~~---~~~~~~~ 261 (342)
T d2ovrb2 197 TSIRVWDVETGNCIHTLTGH----QSLTSGMELKDNI-LVSGNA------DSTVKIWDIKTGQ-CLQTLQ---GPNKHQS 261 (342)
T ss_dssp SCEEEEETTTCCEEEEECCC----CSCEEEEEEETTE-EEEEET------TSCEEEEETTTCC-EEEEEC---STTSCSS
T ss_pred CeEEEeecccceeeeEeccc----ccceeEEecCCCE-EEEEcC------CCEEEEEeccccc-cccccc---ccceeee
Confidence 56888898877644332211 1111233333454 444543 2458999988732 122221 1111222
Q ss_pred ccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccc
Q 004198 155 GHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLAD 234 (769)
Q Consensus 155 ~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d 234 (769)
........+ .+++.|+.++ .+.+||++++....+..... .......-.+.....++.+++.|+.++... .-
T Consensus 262 ~~~~~~~~~-~~~~s~s~Dg-----~i~iwd~~tg~~i~~~~~~~-~~~~~~~v~~v~~s~~~~~la~g~~dGt~~--~~ 332 (342)
T d2ovrb2 262 AVTCLQFNK-NFVITSSDDG-----TVKLWDLKTGEFIRNLVTLE-SGGSGGVVWRIRASNTKLVCAVGSRNGTEE--TK 332 (342)
T ss_dssp CEEEEEECS-SEEEEEETTS-----EEEEEETTTCCEEEEEEECT-TGGGTCEEEEEEECSSEEEEEEECSSSSSC--CE
T ss_pred ceeecccCC-CeeEEEcCCC-----EEEEEECCCCCEEEEEeccc-CCCCCCCEEEEEECCCCCEEEEEeCCCCCe--eE
Confidence 223333444 5667777654 47889998773222211111 000011112223346778888887765433 23
Q ss_pred eEEEecC
Q 004198 235 AYGLLMH 241 (769)
Q Consensus 235 ~~~ld~~ 241 (769)
++.+|.+
T Consensus 333 l~~~Df~ 339 (342)
T d2ovrb2 333 LLVLDFD 339 (342)
T ss_dssp EEEEECC
T ss_pred EEEEeCC
Confidence 4555544
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=83.22 E-value=21 Score=34.42 Aligned_cols=77 Identities=14% Similarity=0.042 Sum_probs=38.4
Q ss_pred EEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCC
Q 004198 210 TASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEA 288 (769)
Q Consensus 210 sa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~ 288 (769)
++....++..++.|+.++ .+..+|............... | -.++++. ++++++ +|..+ ..
T Consensus 206 ~~~~s~~g~~l~s~~~d~------~i~iwd~~~~~~~~~~~~~~~-~----v~s~~fs~d~~~la-~g~d~-------~~ 266 (371)
T d1k8kc_ 206 GVCFSANGSRVAWVSHDS------TVCLADADKKMAVATLASETL-P----LLAVTFITESSLVA-AGHDC-------FP 266 (371)
T ss_dssp EEEECSSSSEEEEEETTT------EEEEEEGGGTTEEEEEECSSC-C----EEEEEEEETTEEEE-EETTS-------SC
T ss_pred EEEeecccccccccccCC------cceEEeeecccceeeeecccc-c----ceeeeecCCCCEEE-EEcCC-------ce
Confidence 334446666677776532 344555544322221111111 1 1233333 666655 45432 23
Q ss_pred cEEEEECCCCcEEeccC
Q 004198 289 AVAVLDTAAGVWLDRNG 305 (769)
Q Consensus 289 ~v~~yd~~t~~W~~~~~ 305 (769)
.++.++.....|.....
T Consensus 267 ~~~~~~~~~~~~~~~~~ 283 (371)
T d1k8kc_ 267 VLFTYDSAAGKLSFGGR 283 (371)
T ss_dssp EEEEEETTTTEEEECCC
T ss_pred EEEEeeCCCceEEEeee
Confidence 48888888888876543
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=80.32 E-value=38 Score=35.42 Aligned_cols=129 Identities=14% Similarity=0.175 Sum_probs=75.4
Q ss_pred cEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECC-CC--cEEEecCCCCCCcccc-------c
Q 004198 33 HTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVL-TR--KWTRIRPAGEPPSPRA-------A 102 (769)
Q Consensus 33 ht~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~-~~--~W~~l~~~g~~P~~R~-------~ 102 (769)
.+-+++ +++||+..+. .+.++.+|.. ++ .|+.-+.. ....|. .
T Consensus 56 ~tP~v~------~g~vyv~t~~-------------------~~~v~Alda~~tG~~~W~~~~~~--~~~~~~~~~~~~~~ 108 (571)
T d2ad6a1 56 GAPLVI------GDMMYVHSAF-------------------PNNTYALNLNDPGKIVWQHKPKQ--DASTKAVMCCDVVD 108 (571)
T ss_dssp SCCEEE------TTEEEEECST-------------------TTCEEEEETTCTTSEEEEECCCC--CGGGGGGCTTCSCC
T ss_pred cCCEEE------CCEEEEecCC-------------------CCeEEEEeCCCCCceEEEecCCC--CcccccccccCcCC
Confidence 355566 8899987652 2468888874 55 48743221 111111 1
Q ss_pred ceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCcee
Q 004198 103 HAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAW 182 (769)
Q Consensus 103 hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~ 182 (769)
-+.+..+++||+... ...++++|.++.+..|..-.. ...+......+-+++++ .+|+.+..........+.
T Consensus 109 rg~a~~~~~i~~~~~-------~g~l~alda~tG~~~w~~~~~-~~~~~~~~t~~p~v~~~-~vivg~~~~~~~~~G~v~ 179 (571)
T d2ad6a1 109 RGLAYGAGQIVKKQA-------NGHLLALDAKTGKINWEVEVC-DPKVGSTLTQAPFVAKD-TVLMGCSGAELGVRGAVN 179 (571)
T ss_dssp CCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEECC-CGGGTCBCCSCCEEETT-EEEEECBCGGGTCCCEEE
T ss_pred CcceeeCCeEEEEeC-------CCcEEeeehhhhhhhcccccc-ccccccceeecCeEeCC-eEEEeeccccccccCcEE
Confidence 234666788887532 245999999998878876421 11111112223335565 666644333333456799
Q ss_pred EEeCCCCCceEEEcC
Q 004198 183 ALDTAQKPYVWQRLN 197 (769)
Q Consensus 183 ~~d~~~~~~~W~~v~ 197 (769)
.||..+....|+.-.
T Consensus 180 a~D~~TG~~~W~~~t 194 (571)
T d2ad6a1 180 AFDLKTGELKWRAFA 194 (571)
T ss_dssp EEETTTCCEEEEEES
T ss_pred EEECCCCcEEEEEec
Confidence 999999988997643
|