Citrus Sinensis ID: 004236
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 766 | 2.2.26 [Sep-21-2011] | |||||||
| P24724 | 721 | Heat shock protein 90 OS= | yes | no | 0.822 | 0.873 | 0.450 | 1e-161 | |
| P54651 | 700 | Heat shock cognate 90 kDa | yes | no | 0.813 | 0.89 | 0.462 | 1e-161 | |
| Q04619 | 725 | Heat shock cognate protei | yes | no | 0.821 | 0.867 | 0.457 | 1e-160 | |
| Q66HD0 | 804 | Endoplasmin OS=Rattus nor | yes | no | 0.826 | 0.787 | 0.464 | 1e-160 | |
| Q90474 | 725 | Heat shock protein HSP 90 | yes | no | 0.821 | 0.867 | 0.445 | 1e-160 | |
| P08113 | 802 | Endoplasmin OS=Mus muscul | yes | no | 0.826 | 0.789 | 0.464 | 1e-159 | |
| Q95M18 | 804 | Endoplasmin OS=Bos taurus | yes | no | 0.826 | 0.787 | 0.464 | 1e-159 | |
| P30946 | 694 | Heat shock protein HSP 90 | yes | no | 0.804 | 0.887 | 0.448 | 1e-159 | |
| P02828 | 717 | Heat shock protein 83 OS= | yes | no | 0.822 | 0.878 | 0.452 | 1e-159 | |
| P08110 | 795 | Endoplasmin OS=Gallus gal | no | no | 0.826 | 0.796 | 0.461 | 1e-158 |
| >sp|P24724|HSP90_THEPA Heat shock protein 90 OS=Theileria parva GN=TP02_0244 PE=2 SV=2 | Back alignment and function desciption |
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Score = 568 bits (1465), Expect = e-161, Method: Compositional matrix adjust.
Identities = 316/702 (45%), Positives = 447/702 (63%), Gaps = 72/702 (10%)
Query: 74 EAPDTSGEKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLL 133
E PD E + + A++S+L+ LI+++ YS+KE+FLREL+SNASDAL+K+R+ ++ +P +
Sbjct: 6 ETPDQ--EVYAFNADISQLLSLIINAFYSNKEIFLRELISNASDALEKIRYEAIKDPKQI 63
Query: 134 GDAGDLEIRIKPDPENGTITITDTGIGMTKEELVDCLGTIAQSGTSKFLKALKENNDLGA 193
D D IR+ D N T+TI D+GIGMTK +LV+ LGTIA+SGT F++AL+ G+
Sbjct: 64 EDQPDYYIRLYADKNNNTLTIEDSGIGMTKADLVNNLGTIAKSGTRAFMEALQ----AGS 119
Query: 194 DNGLIGQFGVGFYSAFLVAQKV------------------------EETDPEKLLKRGTQ 229
D +IGQFGVGFYSA+LVA KV ++ D + LKRGT+
Sbjct: 120 DMSMIGQFGVGFYSAYLVADKVTVVSKNNADDQYVWESTASGHFTVKKDDSHEPLKRGTR 179
Query: 230 ITLYLKEDDKYEFSEPTRIQGLVKNYSQFVSFPIYTWQEKSRTIEV-------EEEEKPE 282
+ L+LKED + E+ E R++ LVK +S+F+SFPI EK++ EV +E++KPE
Sbjct: 180 LILHLKED-QTEYLEERRLKELVKKHSEFISFPISLSVEKTQETEVTDDEAELDEDKKPE 238
Query: 283 EGEEQPEGEK------------------------KTKKTTKTEKYWDWELANETKPIWMR 318
E E+P+ +K K +K T + +WE+ N+ KPIWMR
Sbjct: 239 E--EKPKDDKVEDVTDEKVTDVTDEEEKKEEKKKKKRKVTNVTR--EWEMLNKQKPIWMR 294
Query: 319 NPKEIEKDEYHEFYKKTFNEFLDPLAYTHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKT 378
P E+ +EY FYK N++ D LA HF+ EG++EF+++L++P P + E K
Sbjct: 295 LPSEVTNEEYAAFYKNLTNDWEDHLAVKHFSVEGQLEFKALLFVPRRAPFDMFE-SRKKK 353
Query: 379 KNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLV 438
NI+LYV+RVFI DD + EL P +LSFVKGVVDS+DLPLN+SRE LQ+++I++++RK LV
Sbjct: 354 NNIKLYVRRVFIMDDCE-ELIPEWLSFVKGVVDSEDLPLNISRETLQQNKILKVIRKNLV 412
Query: 439 RKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGNHKRLAPLLRFYTSKSEEELI 498
+K ++ +++ E KED+KKF+E F + LKLG ED+ N ++A LLRF T+KS +EL+
Sbjct: 413 KKCLELFNELT--EKKEDFKKFYEQFSKNLKLGIHEDNANRSKIAELLRFETTKSGDELV 470
Query: 499 SLDEYVENMGEKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQT 558
SL EYV+ M Q +YY+ +S +S S+PFLE L +D EVLY+ +PIDE A+Q ++
Sbjct: 471 SLKEYVDRMKSDQKYVYYITGESKQSVASSPFLETLRARDYEVLYMTDPIDEYAVQQIKE 530
Query: 559 FNEKKFVDISKEDLELGD-EDEVKERET-KQEFNLLCDWIKQQLGDKVAKVQVSKRLSSS 616
F KK +KE L+L + EDE K E K+E LC IK+ L DKV KV R + S
Sbjct: 531 FEGKKLKCCTKEGLDLDEGEDEKKSFEALKEEMEPLCKHIKEVLHDKVEKVVCGTRFTDS 590
Query: 617 PCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPD 676
PC LV+ +FGWSANMER+MKAQAL D+S +M ++I+EINP H I+K+L N
Sbjct: 591 PCALVTSEFGWSANMERIMKAQALRDSSITSYMLSKKIMEINPRHSIMKELKTRAANDKT 650
Query: 677 STDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALG 718
K V LLYDTAL++SGF D P GN+IY M+ + L
Sbjct: 651 DKTVKDLVWLLYDTALLTSGFNLDEPTQFGNRIYRMIKLGLS 692
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Molecular chaperone that promotes the maturation, structural maintenance and proper regulation of specific target proteins involved for instance in cell cycle control and signal transduction. Undergoes a functional cycle that is linked to its ATPase activity. This cycle probably induces conformational changes in the client proteins, thereby causing their activation. Interacts dynamically with various co-chaperones that modulate its substrate recognition, ATPase cycle and chaperone function. Theileria parva (taxid: 5875) |
| >sp|P54651|HSC90_DICDI Heat shock cognate 90 kDa protein OS=Dictyostelium discoideum GN=hspD PE=1 SV=2 | Back alignment and function description |
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| >sp|Q04619|HS90B_CHICK Heat shock cognate protein HSP 90-beta OS=Gallus gallus GN=HSP90AB1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q66HD0|ENPL_RAT Endoplasmin OS=Rattus norvegicus GN=Hsp90b1 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q90474|H90A1_DANRE Heat shock protein HSP 90-alpha 1 OS=Danio rerio GN=hsp90a.1 PE=1 SV=3 | Back alignment and function description |
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| >sp|P08113|ENPL_MOUSE Endoplasmin OS=Mus musculus GN=Hsp90b1 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q95M18|ENPL_BOVIN Endoplasmin OS=Bos taurus GN=HSP90B1 PE=2 SV=1 | Back alignment and function description |
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| >sp|P30946|HS90A_RABIT Heat shock protein HSP 90-alpha OS=Oryctolagus cuniculus GN=HSP90AA1 PE=1 SV=2 | Back alignment and function description |
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| >sp|P02828|HSP83_DROME Heat shock protein 83 OS=Drosophila melanogaster GN=Hsp83 PE=1 SV=1 | Back alignment and function description |
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| >sp|P08110|ENPL_CHICK Endoplasmin OS=Gallus gallus GN=HSP90B1 PE=1 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 766 | ||||||
| 224099261 | 791 | predicted protein [Populus trichocarpa] | 0.990 | 0.959 | 0.847 | 0.0 | |
| 224111838 | 793 | predicted protein [Populus trichocarpa] | 0.994 | 0.960 | 0.828 | 0.0 | |
| 359473642 | 792 | PREDICTED: heat shock protein 83-like [V | 0.994 | 0.962 | 0.811 | 0.0 | |
| 20453106 | 780 | At2g04030/F3C11.14 [Arabidopsis thaliana | 0.977 | 0.960 | 0.795 | 0.0 | |
| 15228059 | 780 | Chaperone protein htpG family protein [A | 0.977 | 0.960 | 0.795 | 0.0 | |
| 30678090 | 777 | Chaperone protein htpG family protein [A | 0.973 | 0.960 | 0.791 | 0.0 | |
| 356499958 | 794 | PREDICTED: heat shock protein 83-like [G | 0.983 | 0.948 | 0.794 | 0.0 | |
| 449463523 | 781 | PREDICTED: heat shock protein 83-like [C | 0.980 | 0.961 | 0.797 | 0.0 | |
| 297738210 | 750 | unnamed protein product [Vitis vinifera] | 0.916 | 0.936 | 0.822 | 0.0 | |
| 297814716 | 780 | hypothetical protein ARALYDRAFT_484305 [ | 0.977 | 0.960 | 0.799 | 0.0 |
| >gi|224099261|ref|XP_002311417.1| predicted protein [Populus trichocarpa] gi|222851237|gb|EEE88784.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 1333 bits (3451), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 676/798 (84%), Positives = 720/798 (90%), Gaps = 39/798 (4%)
Query: 1 MAPVLSRTLAT-TSLVSLPTSTPFSFKHSNNKAFNFRSAFLPRSGGL----TCAGLKWNL 55
MAPVLSR+LAT SL+SLP+S +H NNK N RS FL ++ GL +C+GLKW L
Sbjct: 1 MAPVLSRSLATYASLISLPSS----IRHPNNKVLNLRSVFLSQNNGLKKEFSCSGLKWKL 56
Query: 56 QKRNKRVGIRCDAAVADKEAPDTSGEKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNA 115
+KRN R+ +RC+AAVA+KEA DTSGEKFEYQAEVSRL+DLIVHSLYSHKEVFLRELVSNA
Sbjct: 57 EKRNDRISVRCEAAVAEKEATDTSGEKFEYQAEVSRLLDLIVHSLYSHKEVFLRELVSNA 116
Query: 116 SDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPENGTITITDTGIGMTKEELVDCLGTIAQ 175
SDALDKLRFLSVTEPSLLGDAGDLEIRI+PDP+NGTITITDTGIGMTKEELVDCLGTIAQ
Sbjct: 117 SDALDKLRFLSVTEPSLLGDAGDLEIRIRPDPDNGTITITDTGIGMTKEELVDCLGTIAQ 176
Query: 176 SGTSKFLKALKENNDLGADNGLIGQFGVGFYSAFLVAQKV-------------------- 215
SGTSKFLKALKEN D GADNGLIGQFGVGFYSAFLVA+KV
Sbjct: 177 SGTSKFLKALKENKDAGADNGLIGQFGVGFYSAFLVAEKVVVSTKSPKSDKQHVWESEAD 236
Query: 216 -------EETDPEKLLKRGTQITLYLKEDDKYEFSEPTRIQGLVKNYSQFVSFPIYTWQE 268
EETDPEKLL+RGTQITLYL+EDDKYEFS+P RIQGLVKNYSQFV+FPIYTW+E
Sbjct: 237 SSSYVIKEETDPEKLLRRGTQITLYLREDDKYEFSDPVRIQGLVKNYSQFVAFPIYTWEE 296
Query: 269 KSRTIEVEEEEKPEEGEEQPEGEKKTKKTTKTEKYWDWELANETKPIWMRNPKEIEKDEY 328
KSRT+EVEEEE+P+EGEE PEGEKK K TKTEKYWDWEL NETKPIWMRNPKE+EKDEY
Sbjct: 297 KSRTVEVEEEEEPKEGEEVPEGEKKKTKKTKTEKYWDWELVNETKPIWMRNPKEVEKDEY 356
Query: 329 HEFYKKTFNEFLDPLAYTHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRV 388
EFYKKTFNEFLDPLAY HFT EGEVEFRSVLYIPGMGPLNNEE++NPKTKNIRLYVKRV
Sbjct: 357 QEFYKKTFNEFLDPLAYAHFTIEGEVEFRSVLYIPGMGPLNNEEVINPKTKNIRLYVKRV 416
Query: 389 FISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDI 448
FISDDFDGELFPRYLSFV+GVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQD+
Sbjct: 417 FISDDFDGELFPRYLSFVRGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDL 476
Query: 449 SQSENKEDYKKFWENFGRFLKLGCVEDSGNHKRLAPLLRFYTSKSEEELISLDEYVENMG 508
S+SENKEDYKKFWENFGRFLKLGCVEDSGNHKR+ PLLRFYTSKSEEEL SLDEY+ENMG
Sbjct: 477 SESENKEDYKKFWENFGRFLKLGCVEDSGNHKRITPLLRFYTSKSEEELTSLDEYIENMG 536
Query: 509 EKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDIS 568
E Q AIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQT+ EKKFVDIS
Sbjct: 537 ENQKAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTYKEKKFVDIS 596
Query: 569 KEDLELGDEDEVKERETKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWS 628
KEDLELG +DEV+ERETKQE+NLLCDWIKQQLG+KVAKVQVSKRLSSSPCVLVSGKFGWS
Sbjct: 597 KEDLELGGDDEVEERETKQEYNLLCDWIKQQLGEKVAKVQVSKRLSSSPCVLVSGKFGWS 656
Query: 629 ANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLY 688
ANMERLMKAQALGD SSLEFMRGRRILEINPDHPI+KDLNAACKNAPDS+DAKRAVDLLY
Sbjct: 657 ANMERLMKAQALGDQSSLEFMRGRRILEINPDHPIIKDLNAACKNAPDSSDAKRAVDLLY 716
Query: 689 DTALISSGFTPDSPADLGNKIYEMMAMALGGRWGRSDGDEAESVEGNATESEISAGEASE 748
DTALISSGFTPDSPA+LG KIYEMMAMALGGRWGRSDGDEAE NA ES+ +A E SE
Sbjct: 717 DTALISSGFTPDSPAELGGKIYEMMAMALGGRWGRSDGDEAED---NAEESDANASETSE 773
Query: 749 AQVVEPSEVRNESDPWQD 766
QV+EPSEVR ESDPWQD
Sbjct: 774 PQVIEPSEVRTESDPWQD 791
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224111838|ref|XP_002315997.1| predicted protein [Populus trichocarpa] gi|222865037|gb|EEF02168.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|359473642|ref|XP_002267463.2| PREDICTED: heat shock protein 83-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|20453106|gb|AAM19795.1| At2g04030/F3C11.14 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|15228059|ref|NP_178487.1| Chaperone protein htpG family protein [Arabidopsis thaliana] gi|16930685|gb|AAL32008.1|AF436826_1 At2g04030/F3C11.14 [Arabidopsis thaliana] gi|4914387|gb|AAD32922.1| putative heat shock protein [Arabidopsis thaliana] gi|15450723|gb|AAK96633.1| At2g04030/F3C11.14 [Arabidopsis thaliana] gi|25090168|gb|AAN72245.1| At2g04030/F3C11.14 [Arabidopsis thaliana] gi|330250684|gb|AEC05778.1| Chaperone protein htpG family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|30678090|ref|NP_849932.1| Chaperone protein htpG family protein [Arabidopsis thaliana] gi|330250685|gb|AEC05779.1| Chaperone protein htpG family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|356499958|ref|XP_003518802.1| PREDICTED: heat shock protein 83-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|449463523|ref|XP_004149483.1| PREDICTED: heat shock protein 83-like [Cucumis sativus] gi|449518043|ref|XP_004166053.1| PREDICTED: heat shock protein 83-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|297738210|emb|CBI27411.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297814716|ref|XP_002875241.1| hypothetical protein ARALYDRAFT_484305 [Arabidopsis lyrata subsp. lyrata] gi|297321079|gb|EFH51500.1| hypothetical protein ARALYDRAFT_484305 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 766 | ||||||
| TAIR|locus:2049651 | 780 | CR88 [Arabidopsis thaliana (ta | 0.758 | 0.744 | 0.764 | 2.19999999864e-315 | |
| TAIR|locus:2077352 | 799 | Hsp89.1 "HEAT SHOCK PROTEIN 89 | 0.699 | 0.670 | 0.642 | 7.7e-240 | |
| UNIPROTKB|F1NC33 | 725 | HSP90AB1 "Heat shock cognate p | 0.536 | 0.566 | 0.479 | 1.1e-148 | |
| UNIPROTKB|F1NDI7 | 727 | HSP90AB1 "Heat shock cognate p | 0.536 | 0.565 | 0.479 | 1.1e-148 | |
| UNIPROTKB|Q04619 | 725 | HSP90AB1 "Heat shock cognate p | 0.536 | 0.566 | 0.479 | 1.9e-148 | |
| ZFIN|ZDB-GENE-031001-3 | 734 | hsp90aa1.2 "heat shock protein | 0.536 | 0.559 | 0.477 | 6.2e-148 | |
| UNIPROTKB|P08238 | 724 | HSP90AB1 "Heat shock protein H | 0.552 | 0.584 | 0.470 | 2.7e-147 | |
| UNIPROTKB|Q76LV1 | 724 | HSP90AB1 "Heat shock protein H | 0.536 | 0.567 | 0.477 | 4.3e-147 | |
| MGI|MGI:96247 | 724 | Hsp90ab1 "heat shock protein 9 | 0.536 | 0.567 | 0.477 | 5.5e-147 | |
| RGD|1303075 | 724 | Hsp90ab1 "heat shock protein 9 | 0.536 | 0.567 | 0.477 | 5.5e-147 |
| TAIR|locus:2049651 CR88 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2348 (831.6 bits), Expect = 2.2e-315, Sum P(2) = 2.2e-315
Identities = 462/604 (76%), Positives = 506/604 (83%)
Query: 171 GTIAQSGT---SKFLKALK---ENNDLGADNGLIGQFGVGFYSAFLVAQKVEETDPEKLL 224
G I Q G S FL A K +D + + V S++L+ EETDP+ +L
Sbjct: 192 GLIGQFGVGFYSAFLVAEKVVVSTKSPKSDKQYVWE-SVADSSSYLIR---EETDPDNIL 247
Query: 225 KRGTQITLYLKEDDKYEFSEPTRIQGLVKNYSQFVSFPIYTWQEKSRTIEVXXXXXXXXX 284
+RGTQITLYL+EDDKYEF+E TRI+ LVKNYSQFV FPIYTWQEKSRTIEV
Sbjct: 248 RRGTQITLYLREDDKYEFAESTRIKNLVKNYSQFVGFPIYTWQEKSRTIEVEEDEPVKEG 307
Query: 285 XXXXXXXXXXXXXXXXXXYWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLA 344
YWDWELANETKP+WMRN KE+EK EY+EFYKK FNEFLDPLA
Sbjct: 308 EEGEPKKKKTTKTEK---YWDWELANETKPLWMRNSKEVEKGEYNEFYKKAFNEFLDPLA 364
Query: 345 YTHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLS 404
+THFTTEGEVEFRS+LYIPGMGPLNNE++ NPKTKNIRLYVKRVFISDDFDGELFPRYLS
Sbjct: 365 HTHFTTEGEVEFRSILYIPGMGPLNNEDVTNPKTKNIRLYVKRVFISDDFDGELFPRYLS 424
Query: 405 FVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENF 464
FVKGVVDSDDLPLNVSREILQESRIVRIMRKRL+RKTFDMIQ+IS+SENKEDYKKFWENF
Sbjct: 425 FVKGVVDSDDLPLNVSREILQESRIVRIMRKRLIRKTFDMIQEISESENKEDYKKFWENF 484
Query: 465 GRFLKLGCVEDSGNHKRLAPLLRFYTSKSEEELISLDEYVENMGEKQNAIYYLATDSLKS 524
GRFLKLGC+ED+GNHKR+ PLLRF++SK+EEEL SLD+Y+ENMGE Q AIYYLATDSLKS
Sbjct: 485 GRFLKLGCIEDTGNHKRITPLLRFFSSKNEEELTSLDDYIENMGENQKAIYYLATDSLKS 544
Query: 525 AKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKERE 584
AKSAPFLEKL+QKDIEVLYL+EPIDEVAIQNLQT+ EKKFVDISKEDLELGDEDEVK+RE
Sbjct: 545 AKSAPFLEKLIQKDIEVLYLVEPIDEVAIQNLQTYKEKKFVDISKEDLELGDEDEVKDRE 604
Query: 585 TKQEFNLLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTS 644
KQEFNLLCDWIKQQLGDKVAKVQVS RLSSSPCVLVSGKFGWSANMERLMKAQALGDTS
Sbjct: 605 AKQEFNLLCDWIKQQLGDKVAKVQVSNRLSSSPCVLVSGKFGWSANMERLMKAQALGDTS 664
Query: 645 SLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPAD 704
SLEFMRGRRILEINPDHPI+KDLNAACKNAP+ST+A R VDLLYDTA+ISSGFTPDSPA+
Sbjct: 665 SLEFMRGRRILEINPDHPIIKDLNAACKNAPESTEATRVVDLLYDTAIISSGFTPDSPAE 724
Query: 705 LGNKIYEMMAMALGGRWGRSDGDEAESV--EGNXXXXXXXXXXXXXXQVVEPSEVRNESD 762
LGNKIYEMMAMA+GGRWGR + +E S EG+ +VVEPSEVR ESD
Sbjct: 725 LGNKIYEMMAMAVGGRWGRVEEEEESSTVNEGDDKSGET--------EVVEPSEVRAESD 776
Query: 763 PWQD 766
PWQD
Sbjct: 777 PWQD 780
|
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| TAIR|locus:2077352 Hsp89.1 "HEAT SHOCK PROTEIN 89.1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1NC33 HSP90AB1 "Heat shock cognate protein HSP 90-beta" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1NDI7 HSP90AB1 "Heat shock cognate protein HSP 90-beta" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q04619 HSP90AB1 "Heat shock cognate protein HSP 90-beta" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-031001-3 hsp90aa1.2 "heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P08238 HSP90AB1 "Heat shock protein HSP 90-beta" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q76LV1 HSP90AB1 "Heat shock protein HSP 90-beta" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| MGI|MGI:96247 Hsp90ab1 "heat shock protein 90 alpha (cytosolic), class B member 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| RGD|1303075 Hsp90ab1 "heat shock protein 90 alpha (cytosolic), class B member 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P24724 | HSP90_THEPA | No assigned EC number | 0.4501 | 0.8224 | 0.8737 | yes | no |
| Q7PT10 | HSP83_ANOGA | No assigned EC number | 0.4573 | 0.8224 | 0.875 | yes | no |
| Q25293 | HSP83_LEIIN | No assigned EC number | 0.4370 | 0.8211 | 0.8972 | yes | no |
| Q4UDU8 | HSP90_THEAN | No assigned EC number | 0.4520 | 0.8276 | 0.8781 | yes | no |
| Q90474 | H90A1_DANRE | No assigned EC number | 0.4452 | 0.8211 | 0.8675 | yes | no |
| P02828 | HSP83_DROME | No assigned EC number | 0.4526 | 0.8224 | 0.8786 | yes | no |
| P54651 | HSC90_DICDI | No assigned EC number | 0.4627 | 0.8133 | 0.89 | yes | no |
| Q04619 | HS90B_CHICK | No assigned EC number | 0.4570 | 0.8211 | 0.8675 | yes | no |
| P04809 | HSP83_DROPS | No assigned EC number | 0.4483 | 0.8224 | 0.8786 | yes | no |
| P30946 | HS90A_RABIT | No assigned EC number | 0.4487 | 0.8041 | 0.8876 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
 |
 |
 |
 |
 |
 |
 |
 |
 |
|||
 | eugene3.00081050 | hypothetical protein (791 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
 | fgenesh4_pm.C_LG_XV000408 | • | • | 0.803 | |||||||
 | fgenesh4_pm.C_LG_IV000317 | • | 0.800 | ||||||||
 | fgenesh4_pg.C_LG_II001977 | • | 0.800 | ||||||||
 | estExt_Genewise1_v1.C_440672 | • | 0.800 | ||||||||
 | eugene3.26620001 | • | 0.458 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 766 | |||
| PRK05218 | 613 | PRK05218, PRK05218, heat shock protein 90; Provisi | 0.0 | |
| COG0326 | 623 | COG0326, HtpG, Molecular chaperone, HSP90 family [ | 0.0 | |
| PTZ00272 | 701 | PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp | 0.0 | |
| pfam00183 | 529 | pfam00183, HSP90, Hsp90 protein | 0.0 | |
| PTZ00130 | 814 | PTZ00130, PTZ00130, heat shock protein 90; Provisi | 1e-161 | |
| PRK14083 | 601 | PRK14083, PRK14083, HSP90 family protein; Provisio | 9e-32 | |
| pfam02518 | 111 | pfam02518, HATPase_c, Histidine kinase-, DNA gyras | 2e-10 | |
| cd00075 | 103 | cd00075, HATPase_c, Histidine kinase-like ATPases; | 2e-10 | |
| smart00387 | 111 | smart00387, HATPase_c, Histidine kinase-like ATPas | 7e-10 | |
| pfam13589 | 134 | pfam13589, HATPase_c_3, Histidine kinase-, DNA gyr | 3e-06 |
| >gnl|CDD|235366 PRK05218, PRK05218, heat shock protein 90; Provisional | Back alignment and domain information |
|---|
Score = 718 bits (1855), Expect = 0.0
Identities = 285/668 (42%), Positives = 399/668 (59%), Gaps = 82/668 (12%)
Query: 78 TSGEKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAG 137
+ E E+QAEV +L+ L++HSLYS+KE+FLREL+SNASDA+DKLRF ++T+P+L G
Sbjct: 1 MAMETGEFQAEVKQLLHLMIHSLYSNKEIFLRELISNASDAIDKLRFEALTDPALYEGDG 60
Query: 138 DLEIRIKPDPENGTITITDTGIGMTKEELVDCLGTIAQSGTSKFLKALKENNDLGADNGL 197
DL+IRI D E T+TI+D GIGMT+EE+++ LGTIA+SGT +FL+ LK + D+ L
Sbjct: 61 DLKIRISFDKEARTLTISDNGIGMTREEVIENLGTIAKSGTKEFLEKLKGDQK--KDSQL 118
Query: 198 IGQFGVGFYSAFLVAQKVE-----------------------ETDPEKLLKRGTQITLYL 234
IGQFGVGFYSAF+VA KV + + +RGT+ITL+L
Sbjct: 119 IGQFGVGFYSAFMVADKVTVITRSAGPAAEAVRWESDGEGEYTIEEIEKEERGTEITLHL 178
Query: 235 KEDDKYEFSEPTRIQGLVKNYSQFVSFPIYTWQEKSRTIEVEEEEKPEEGEEQPEGEKKT 294
KED+ EF + RI+ ++K YS F+ PI +E EEEE
Sbjct: 179 KEDED-EFLDEWRIRSIIKKYSDFIPVPIK--------LEKEEEET-------------- 215
Query: 295 KKTTKTEKYWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYTHFTTEGEV 354
N +W R+ EI +EY EFYK ++F DPL + H EG
Sbjct: 216 --------------INSASALWTRSKSEITDEEYKEFYKHLAHDFDDPLFWIHNNVEGPF 261
Query: 355 EFRSVLYIPGMGPLNNEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVKGVVDSD 413
E+ +LYIP P ++ N K ++LYVKRVFI DD + EL P YL FVKGV+DS+
Sbjct: 262 EYTGLLYIPKKAP---FDLFNRDRKGGLKLYVKRVFIMDDAE-ELLPEYLRFVKGVIDSE 317
Query: 414 DLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCV 473
DLPLNVSREILQE R+V+ +RK + +K D ++ +++ ++E Y+KFW+ FG LK G
Sbjct: 318 DLPLNVSREILQEDRVVKKIRKAITKKVLDELEKLAK-NDREKYEKFWKEFGPVLKEGLY 376
Query: 474 EDSGNHKRLAPLLRFYTSKSEEELISLDEYVENMGEKQNAIYYLATDSLKSAKSAPFLEK 533
ED N ++LA LLRF ++ E + +SL EYVE M E Q IYY+ DS ++AK++P LE
Sbjct: 377 EDFANREKLAKLLRFASTH-EGKYVSLAEYVERMKEGQKKIYYITGDSREAAKNSPHLEL 435
Query: 534 LVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKE---RETKQEFN 590
+K IEVL L +PIDE I L+ F+ K F +++ DL+LG EDE ++ E ++EF
Sbjct: 436 FKKKGIEVLLLTDPIDEFWISYLEEFDGKPFKSVARGDLDLGKEDEEEKEEKEEAEEEFK 495
Query: 591 LLCDWIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMR 650
L + +K+ LGDKV V++S RL+ SP LV+ + S ME+L+KA E
Sbjct: 496 PLLERLKEALGDKVKDVRLSHRLTDSPACLVADEGDMSTQMEKLLKAA------GQEVPE 549
Query: 651 GRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIY 710
+ ILEINP+HP+VK L + D K +LLYD AL++ G + + PA ++
Sbjct: 550 SKPILEINPNHPLVKKL----ADEADEAKFKDLAELLYDQALLAEGGSLEDPAAFVKRLN 605
Query: 711 EMMAMALG 718
E++ L
Sbjct: 606 ELLLKLLA 613
|
Length = 613 |
| >gnl|CDD|223403 COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >gnl|CDD|240341 PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp83); Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|215774 pfam00183, HSP90, Hsp90 protein | Back alignment and domain information |
|---|
| >gnl|CDD|185466 PTZ00130, PTZ00130, heat shock protein 90; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237603 PRK14083, PRK14083, HSP90 family protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|217081 pfam02518, HATPase_c, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | Back alignment and domain information |
|---|
| >gnl|CDD|238030 cd00075, HATPase_c, Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins | Back alignment and domain information |
|---|
| >gnl|CDD|214643 smart00387, HATPase_c, Histidine kinase-like ATPases | Back alignment and domain information |
|---|
| >gnl|CDD|222246 pfam13589, HATPase_c_3, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 766 | |||
| KOG0020 | 785 | consensus Endoplasmic reticulum glucose-regulated | 100.0 | |
| KOG0019 | 656 | consensus Molecular chaperone (HSP90 family) [Post | 100.0 | |
| PTZ00272 | 701 | heat shock protein 83 kDa (Hsp83); Provisional | 100.0 | |
| PTZ00130 | 814 | heat shock protein 90; Provisional | 100.0 | |
| COG0326 | 623 | HtpG Molecular chaperone, HSP90 family [Posttransl | 100.0 | |
| PRK05218 | 613 | heat shock protein 90; Provisional | 100.0 | |
| PF00183 | 531 | HSP90: Hsp90 protein; InterPro: IPR001404 Molecula | 100.0 | |
| PRK14083 | 601 | HSP90 family protein; Provisional | 100.0 | |
| PF13589 | 137 | HATPase_c_3: Histidine kinase-, DNA gyrase B-, and | 99.39 | |
| COG1389 | 538 | DNA topoisomerase VI, subunit B [DNA replication, | 98.96 | |
| TIGR00585 | 312 | mutl DNA mismatch repair protein MutL. All protein | 98.74 | |
| PRK04184 | 535 | DNA topoisomerase VI subunit B; Validated | 98.59 | |
| PF02518 | 111 | HATPase_c: Histidine kinase-, DNA gyrase B-, and H | 98.47 | |
| TIGR01052 | 488 | top6b DNA topoisomerase VI, B subunit. This model | 98.34 | |
| PRK00095 | 617 | mutL DNA mismatch repair protein; Reviewed | 98.28 | |
| PRK14868 | 795 | DNA topoisomerase VI subunit B; Provisional | 98.17 | |
| PRK14867 | 659 | DNA topoisomerase VI subunit B; Provisional | 97.66 | |
| PRK05559 | 631 | DNA topoisomerase IV subunit B; Reviewed | 97.55 | |
| smart00387 | 111 | HATPase_c Histidine kinase-like ATPases. Histidine | 97.35 | |
| COG0323 | 638 | MutL DNA mismatch repair enzyme (predicted ATPase) | 97.31 | |
| cd00075 | 103 | HATPase_c Histidine kinase-like ATPases; This fami | 96.99 | |
| PRK10755 | 356 | sensor protein BasS/PmrB; Provisional | 96.98 | |
| TIGR02916 | 679 | PEP_his_kin putative PEP-CTERM system histidine ki | 96.96 | |
| smart00433 | 594 | TOP2c TopoisomeraseII. Eukaryotic DNA topoisomeras | 96.95 | |
| PRK10549 | 466 | signal transduction histidine-protein kinase BaeS; | 96.92 | |
| TIGR01055 | 625 | parE_Gneg DNA topoisomerase IV, B subunit, proteob | 96.91 | |
| KOG0019 | 656 | consensus Molecular chaperone (HSP90 family) [Post | 96.88 | |
| PRK14939 | 756 | gyrB DNA gyrase subunit B; Provisional | 96.85 | |
| PRK10604 | 433 | sensor protein RstB; Provisional | 96.77 | |
| PRK11006 | 430 | phoR phosphate regulon sensor protein; Provisional | 96.68 | |
| PRK09470 | 461 | cpxA two-component sensor protein; Provisional | 96.67 | |
| TIGR02938 | 494 | nifL_nitrog nitrogen fixation negative regulator N | 96.63 | |
| TIGR01059 | 654 | gyrB DNA gyrase, B subunit. This model describes t | 96.51 | |
| PRK11100 | 475 | sensory histidine kinase CreC; Provisional | 96.48 | |
| TIGR02966 | 333 | phoR_proteo phosphate regulon sensor kinase PhoR. | 96.43 | |
| PRK11086 | 542 | sensory histidine kinase DcuS; Provisional | 96.42 | |
| TIGR01386 | 457 | cztS_silS_copS heavy metal sensor kinase. Members | 96.41 | |
| PRK10364 | 457 | sensor protein ZraS; Provisional | 96.35 | |
| PRK05644 | 638 | gyrB DNA gyrase subunit B; Validated | 96.33 | |
| PRK10815 | 485 | sensor protein PhoQ; Provisional | 96.26 | |
| PRK11360 | 607 | sensory histidine kinase AtoS; Provisional | 96.21 | |
| PRK15347 | 921 | two component system sensor kinase SsrA; Provision | 96.19 | |
| KOG1977 | 1142 | consensus DNA mismatch repair protein - MLH3 famil | 96.18 | |
| PRK09303 | 380 | adaptive-response sensory kinase; Validated | 96.16 | |
| PRK11466 | 914 | hybrid sensory histidine kinase TorS; Provisional | 96.08 | |
| PRK15053 | 545 | dpiB sensor histidine kinase DpiB; Provisional | 96.01 | |
| PRK09467 | 435 | envZ osmolarity sensor protein; Provisional | 95.88 | |
| TIGR02956 | 968 | TMAO_torS TMAO reductase sytem sensor TorS. This p | 95.85 | |
| PRK11091 | 779 | aerobic respiration control sensor protein ArcB; P | 95.61 | |
| TIGR03785 | 703 | marine_sort_HK proteobacterial dedicated sortase s | 95.57 | |
| COG0642 | 336 | BaeS Signal transduction histidine kinase [Signal | 95.57 | |
| PRK13837 | 828 | two-component VirA-like sensor kinase; Provisional | 95.51 | |
| PRK10337 | 449 | sensor protein QseC; Provisional | 95.46 | |
| COG4191 | 603 | Signal transduction histidine kinase regulating C4 | 95.43 | |
| PRK10490 | 895 | sensor protein KdpD; Provisional | 95.39 | |
| PRK09835 | 482 | sensor kinase CusS; Provisional | 95.18 | |
| PRK11107 | 919 | hybrid sensory histidine kinase BarA; Provisional | 95.14 | |
| PRK10618 | 894 | phosphotransfer intermediate protein in two-compon | 95.04 | |
| PRK10841 | 924 | hybrid sensory kinase in two-component regulatory | 94.87 | |
| PRK03660 | 146 | anti-sigma F factor; Provisional | 94.51 | |
| TIGR01925 | 137 | spIIAB anti-sigma F factor. This model describes t | 94.11 | |
| PRK10547 | 670 | chemotaxis protein CheA; Provisional | 94.07 | |
| PRK09959 | 1197 | hybrid sensory histidine kinase in two-component r | 93.86 | |
| COG3290 | 537 | CitA Signal transduction histidine kinase regulati | 93.85 | |
| PRK10600 | 569 | nitrate/nitrite sensor protein NarX; Provisional | 93.85 | |
| PRK13557 | 540 | histidine kinase; Provisional | 93.39 | |
| PRK11073 | 348 | glnL nitrogen regulation protein NR(II); Provision | 93.28 | |
| TIGR01058 | 637 | parE_Gpos DNA topoisomerase IV, B subunit, Gram-po | 93.08 | |
| COG0187 | 635 | GyrB Type IIA topoisomerase (DNA gyrase/topo II, t | 92.59 | |
| KOG0787 | 414 | consensus Dehydrogenase kinase [Signal transductio | 90.42 | |
| KOG1979 | 694 | consensus DNA mismatch repair protein - MLH1 famil | 90.24 | |
| PLN03128 | 1135 | DNA topoisomerase 2; Provisional | 89.7 | |
| COG5000 | 712 | NtrY Signal transduction histidine kinase involved | 89.3 | |
| PRK04069 | 161 | serine-protein kinase RsbW; Provisional | 89.08 | |
| COG3920 | 221 | Signal transduction histidine kinase [Signal trans | 89.04 | |
| PTZ00108 | 1388 | DNA topoisomerase 2-like protein; Provisional | 88.61 | |
| PLN03237 | 1465 | DNA topoisomerase 2; Provisional | 88.35 | |
| PRK13560 | 807 | hypothetical protein; Provisional | 87.41 | |
| PHA02569 | 602 | 39 DNA topoisomerase II large subunit; Provisional | 87.25 | |
| PRK11644 | 495 | sensory histidine kinase UhpB; Provisional | 85.65 | |
| COG0643 | 716 | CheA Chemotaxis protein histidine kinase and relat | 85.37 | |
| COG2205 | 890 | KdpD Osmosensitive K+ channel histidine kinase [Si | 84.86 | |
| PTZ00109 | 903 | DNA gyrase subunit b; Provisional | 83.4 | |
| COG4585 | 365 | Signal transduction histidine kinase [Signal trans | 81.63 | |
| PF13581 | 125 | HATPase_c_2: Histidine kinase-like ATPase domain | 81.58 | |
| COG3850 | 574 | NarQ Signal transduction histidine kinase, nitrate | 80.99 | |
| TIGR01924 | 159 | rsbW_low_gc serine-protein kinase RsbW. This model | 80.46 |
| >KOG0020 consensus Endoplasmic reticulum glucose-regulated protein (GRP94/endoplasmin), HSP90 family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-175 Score=1400.95 Aligned_cols=640 Identities=48% Similarity=0.857 Sum_probs=592.2
Q ss_pred CCccccchhhhHHHHHHHHHHcCCCCchhHHHHhHHhHHHHHHHHHhhhccCCCCCCCCCCceEEEEecCCCcEEEEEeC
Q 004236 78 TSGEKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPENGTITITDT 157 (766)
Q Consensus 78 ~~~e~~~Fqae~~~ll~ll~~~LYs~~~vflRELIqNA~DA~~k~r~~~~~~~~~~~~~~~~~I~I~~d~~~~~l~I~Dn 157 (766)
+..|+|+||+|++|||+||+|+||+|++||||||||||+||++|+|+++||++.+++...++.|+|..|++++.|.|+|+
T Consensus 70 ~kaeKf~FQaEVnRmMklIINSLY~NKeIFLRELISNASDAlDKIRllaLtd~~~L~~~~el~ikIK~Dke~klLhi~Dt 149 (785)
T KOG0020|consen 70 SKAEKFEFQAEVNRMMKLIINSLYRNKEIFLRELISNASDALDKIRLLALTDKDVLGETEELEIKIKADKEKKLLHITDT 149 (785)
T ss_pred HHhhhhhHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhhhhhhheeeeeccChhHhCcCcceEEEEeechhhCeeeEecc
Confidence 34689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHhhhhhhccCcHHHHHHhhhcccC-CCCCCcccccccceeeeeeecceeE--------------------
Q 004236 158 GIGMTKEELVDCLGTIAQSGTSKFLKALKENNDL-GADNGLIGQFGVGFYSAFLVAQKVE-------------------- 216 (766)
Q Consensus 158 GiGMt~~el~~~L~tIa~Sg~~~f~~~~~~~~~~-~~~~~~IGqFGIGf~S~Fmvad~Ve-------------------- 216 (766)
|||||++||++||||||+|||++|++++++.++. +.-.++||||||||||+|+|||+|.
T Consensus 150 GiGMT~edLi~NLGTIAkSGTs~Fl~Km~~~~~~~~~~~dlIGQFGVGFYsAfLVAD~vvVtsKhNdD~QyiWESdan~F 229 (785)
T KOG0020|consen 150 GIGMTREDLIKNLGTIAKSGTSEFLEKMQDSGDSEGLMNDLIGQFGVGFYSAFLVADRVVVTSKHNDDSQYIWESDANSF 229 (785)
T ss_pred cCCccHHHHHHhhhhhhcccHHHHHHHhhccccchhhHHHHHHhcchhhhhhhhhcceEEEEeccCCccceeeeccCcce
Confidence 9999999999999999999999999999854322 1223699999999999999999995
Q ss_pred ---ecCCCcCCCCceEEEEEecCCCcccccchHHHHHHHHhhCCCcccceeecccccccccccccCCC--CC-CC-----
Q 004236 217 ---ETDPEKLLKRGTQITLYLKEDDKYEFSEPTRIQGLVKNYSQFVSFPIYTWQEKSRTIEVEEEEKP--EE-GE----- 285 (766)
Q Consensus 217 ---s~~~~~~~~~GT~I~L~Lk~~~~~e~~~~~~i~~li~~ys~fi~~pI~~~~~~~~~~~~~~~e~~--~~-~~----- 285 (766)
.++.++..+|||.|+||||+++. +||++++|++||++||+||+|||++|..|+++++++-+|++ ++ +.
T Consensus 230 svseDprg~tL~RGt~ItL~LkeEA~-dyLE~dtlkeLvkkYSqFINFpI~lWsSKt~~~E~pvEEe~~t~e~~~ed~ea 308 (785)
T KOG0020|consen 230 SVSEDPRGNTLGRGTEITLYLKEEAG-DYLEEDTLKELVKKYSQFINFPISLWSSKTVEVEVPVEEEEETEEDSTEDKEA 308 (785)
T ss_pred eeecCCCCCcccCccEEEEEehhhhh-hhcchhHHHHHHHHHHHhcCCceeeeeccceeeecccccccccccccccchhh
Confidence 13467788999999999999998 99999999999999999999999999999877665533321 11 11
Q ss_pred CCccc-cccccccccccccccceecccCCCCcccCCCCCCHHHHHHHHHHHhcCCCCCceeeeeccccceeeEEEEEeeC
Q 004236 286 EQPEG-EKKTKKTTKTEKYWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYTHFTTEGEVEFRSVLYIPG 364 (766)
Q Consensus 286 ~~~~~-~~~~~~k~~~~~~~~~e~iN~~~piW~r~~~evt~eeY~~FYk~~~~~~~dpL~~~h~~~eg~~~f~~llyiP~ 364 (766)
.++++ ++++|+|+|.+.+|+|+.+|+.+|||+|.|++|+++||..|||++++++.+|++|+||++||.+.|++|||||.
T Consensus 309 ~vEEee~EKpKTKKV~kT~wdWel~NdvKpIW~R~p~eV~EdEYt~FYkSlsKds~dPma~~HF~aEGeVtFksiLyVP~ 388 (785)
T KOG0020|consen 309 AVEEEEEEKPKTKKVEKTVWDWELLNDVKPIWLRKPKEVTEDEYTKFYKSLSKDSTDPMAYIHFTAEGEVTFKSILYVPK 388 (785)
T ss_pred hhhhhhhccccccchhhcchhhhhhcccchhhccCchhcchHHHHHHHHhhhccccCccceeeeeccccEEEEEEEEeCC
Confidence 12222 34579999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccc-ccccCeEEEeeeEEeccCCCCCCcccccccceeeecCCCCCCccchHhhhccHHHHHHHHHHHHHHHH
Q 004236 365 MGPLNNEEIMN-PKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFD 443 (766)
Q Consensus 365 ~~p~~~~~~~~-~~~~~ikLYvrrVfIsd~~~~dLlP~wl~FvkGVVDS~DLpLNvSRE~LQ~~~~lk~Irk~l~~kvl~ 443 (766)
.+|.++|+.+. ++..+|+||||||||+|++. ++||.||+||||||||+|||||||||+||++++|++|+|.|++|+++
T Consensus 389 ~~P~~lf~~Yg~~~~dniKLYVrrVFItDeF~-dmmPkYLsFikGvVDSDdLPLNVSrE~LQQHkllKvIkKKLvrK~LD 467 (785)
T KOG0020|consen 389 KAPRDLFDEYGSKKSDNIKLYVRRVFITDEFH-DMMPKYLSFIKGVVDSDDLPLNVSRETLQQHKLLKVIKKKLVRKVLD 467 (785)
T ss_pred CCchHHHHHhccccccceeEEEEEEEecchHH-HHhHHHHHHHhhccCcCcCcccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999997655 56789999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhccCHHHHHH-HHHHHhHHhheecccCcccHHhhcCccceeeccCCCcccCHHHHHHhcccCCCeEEEEecCCH
Q 004236 444 MIQDISQSENKEDYKK-FWENFGRFLKLGCVEDSGNHKRLAPLLRFYTSKSEEELISLDEYVENMGEKQNAIYYLATDSL 522 (766)
Q Consensus 444 ~L~~la~~~d~e~Y~k-F~~~f~~~lK~G~~eD~~nr~~l~~LLrF~Ts~~~~~~~SL~eYv~rmke~Qk~IYYi~~~s~ 522 (766)
||++++. ++|.. ||++||.+||+|++||+.||.+|++||||.||+++.+.+||++|++|||+.|+.|||++|.|+
T Consensus 468 mikKia~----e~~~d~FW~EFgtniKLGviED~sNr~rLAKLLrFqss~~~~~~TsLdqYveRMK~kQ~~IyymaGssr 543 (785)
T KOG0020|consen 468 MIKKIAG----EKYDDIFWKEFGTNIKLGVIEDPSNRTRLAKLLRFQSSNHPTKITSLDQYVERMKEKQDKIYYMAGSSR 543 (785)
T ss_pred HHHHhhc----cccchHHHHHhccceeeeeeeCcccHHHHHHHHhhhccCCCCCcccHHHHHHHHhhccccEEEecCCcH
Confidence 9999994 56776 999999999999999999999999999999999889999999999999999999999999999
Q ss_pred HHHhcCcchHHHhhcCceEEecCCcchHHHHHHHhhccCcceeeccccccCCCCchhHhH--HhhHHHHHHHHHHHHHH-
Q 004236 523 KSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKE--RETKQEFNLLCDWIKQQ- 599 (766)
Q Consensus 523 ~~~~~SP~lE~~~~kG~EVL~l~dpiDE~~lq~L~ey~gk~f~~V~ke~l~l~~~eee~~--e~~~~~f~~L~~~lK~~- 599 (766)
++++.|||+|++.++||||||+++|+||||||.|.+|+||+||+|.++|+.+++.+..++ +..+++|++|++|+|..
T Consensus 544 ~e~E~sPfvERLlkKGyEVi~ltepVDEyciqalpe~d~KkFQNVaKEG~k~~~~eK~Ke~~e~l~~~FepL~~W~k~~a 623 (785)
T KOG0020|consen 544 KEVEKSPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDGKKFQNVAKEGVKFDKSEKTKESHEALEEEFEPLTKWLKDKA 623 (785)
T ss_pred hhhccCcHHHHHHhcCceEEEEcchhHHHHHHhhhhhcchhHhHHHhhhcccCcccchhHHHHHHHHHHHHHHHHHHhhH
Confidence 999999999999999999999999999999999999999999999999999987765544 56788999999999986
Q ss_pred hCCceeEEEEeecCCCCCEEEEeCCCCccHHHHHHHHHHhcC---CCCccccccCceeEEECCCChHHHHHHHhhhcCCC
Q 004236 600 LGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALG---DTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPD 676 (766)
Q Consensus 600 L~~kV~~V~vS~RL~~sP~~lv~se~g~s~~Merimkaq~~~---d~~~~~~~~~kk~LEINp~HPLIk~L~~~~~~~~~ 676 (766)
|.++|++++||+||++|||++|++.||||+||||||++|+.+ |.+...|+.+|++|||||+||||+.|+.++.++++
T Consensus 624 lkd~ieka~vSqrL~~spcalVas~~GwsgNmERimksqa~~~~kD~~~~~Y~~qKkt~EINPRHPlirell~Ri~adee 703 (785)
T KOG0020|consen 624 LKDKIEKAVVSQRLTESPCALVASQYGWSGNMERIMKSQAYQKSKDPSKNYYASQKKTFEINPRHPLIRELLRRIAADEE 703 (785)
T ss_pred HHHHHHHHHHHHHhccCchhhhhhhccccccHHHHHHHhhhhccCCchhhHHhccCceeeeCCCChHHHHHHHHhhcCcc
Confidence 569999999999999999999999999999999999999886 44444578899999999999999999999999999
Q ss_pred chHHHHHHHHHhHHHHHhCCCCCCCHHHHHHHHHHHHHHHhCCCCCCCC
Q 004236 677 STDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALGGRWGRSD 725 (766)
Q Consensus 677 ~~~~~~lv~lLyd~AlL~sG~~ledp~~f~~ri~~Ll~~~L~~~~~~~~ 725 (766)
++.++++|.+||.+|.|.+||.+.|+..|+.||++||+++|+ |+.++
T Consensus 704 D~t~~d~A~lmf~TAtlrSGf~L~d~~~fadrIe~~lr~sL~--is~Da 750 (785)
T KOG0020|consen 704 DETVKDTAVLMFETATLRSGFILQDTKDFADRIENMLRQSLN--ISPDA 750 (785)
T ss_pred cchHHHHHHHHHHHHHhhcCccccchHHHHHHHHHHHHhhcC--CCccc
Confidence 999999999999999999999999999999999999999999 88763
|
|
| >KOG0019 consensus Molecular chaperone (HSP90 family) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PTZ00272 heat shock protein 83 kDa (Hsp83); Provisional | Back alignment and domain information |
|---|
| >PTZ00130 heat shock protein 90; Provisional | Back alignment and domain information |
|---|
| >COG0326 HtpG Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK05218 heat shock protein 90; Provisional | Back alignment and domain information |
|---|
| >PF00183 HSP90: Hsp90 protein; InterPro: IPR001404 Molecular chaperones, or heat shock proteins (Hsps) are ubiquitous proteins that act to maintain proper protein folding within the cell [] | Back alignment and domain information |
|---|
| >PRK14083 HSP90 family protein; Provisional | Back alignment and domain information |
|---|
| >PF13589 HATPase_c_3: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PDB: 3IED_A 2XCM_B 2JKI_B 3OPD_A 2O1V_B 2GQP_A 2O1W_C 1YT2_A 1TC6_A 2H8M_B | Back alignment and domain information |
|---|
| >COG1389 DNA topoisomerase VI, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >TIGR00585 mutl DNA mismatch repair protein MutL | Back alignment and domain information |
|---|
| >PRK04184 DNA topoisomerase VI subunit B; Validated | Back alignment and domain information |
|---|
| >PF02518 HATPase_c: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; InterPro: IPR003594 This domain is found in several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases [], heat shock protein HSP90 [, , ], phytochrome-like ATPases and DNA mismatch repair proteins | Back alignment and domain information |
|---|
| >TIGR01052 top6b DNA topoisomerase VI, B subunit | Back alignment and domain information |
|---|
| >PRK00095 mutL DNA mismatch repair protein; Reviewed | Back alignment and domain information |
|---|
| >PRK14868 DNA topoisomerase VI subunit B; Provisional | Back alignment and domain information |
|---|
| >PRK14867 DNA topoisomerase VI subunit B; Provisional | Back alignment and domain information |
|---|
| >PRK05559 DNA topoisomerase IV subunit B; Reviewed | Back alignment and domain information |
|---|
| >smart00387 HATPase_c Histidine kinase-like ATPases | Back alignment and domain information |
|---|
| >COG0323 MutL DNA mismatch repair enzyme (predicted ATPase) [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >cd00075 HATPase_c Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins | Back alignment and domain information |
|---|
| >PRK10755 sensor protein BasS/PmrB; Provisional | Back alignment and domain information |
|---|
| >TIGR02916 PEP_his_kin putative PEP-CTERM system histidine kinase | Back alignment and domain information |
|---|
| >smart00433 TOP2c TopoisomeraseII | Back alignment and domain information |
|---|
| >PRK10549 signal transduction histidine-protein kinase BaeS; Provisional | Back alignment and domain information |
|---|
| >TIGR01055 parE_Gneg DNA topoisomerase IV, B subunit, proteobacterial | Back alignment and domain information |
|---|
| >KOG0019 consensus Molecular chaperone (HSP90 family) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK14939 gyrB DNA gyrase subunit B; Provisional | Back alignment and domain information |
|---|
| >PRK10604 sensor protein RstB; Provisional | Back alignment and domain information |
|---|
| >PRK11006 phoR phosphate regulon sensor protein; Provisional | Back alignment and domain information |
|---|
| >PRK09470 cpxA two-component sensor protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02938 nifL_nitrog nitrogen fixation negative regulator NifL | Back alignment and domain information |
|---|
| >TIGR01059 gyrB DNA gyrase, B subunit | Back alignment and domain information |
|---|
| >PRK11100 sensory histidine kinase CreC; Provisional | Back alignment and domain information |
|---|
| >TIGR02966 phoR_proteo phosphate regulon sensor kinase PhoR | Back alignment and domain information |
|---|
| >PRK11086 sensory histidine kinase DcuS; Provisional | Back alignment and domain information |
|---|
| >TIGR01386 cztS_silS_copS heavy metal sensor kinase | Back alignment and domain information |
|---|
| >PRK10364 sensor protein ZraS; Provisional | Back alignment and domain information |
|---|
| >PRK05644 gyrB DNA gyrase subunit B; Validated | Back alignment and domain information |
|---|
| >PRK10815 sensor protein PhoQ; Provisional | Back alignment and domain information |
|---|
| >PRK11360 sensory histidine kinase AtoS; Provisional | Back alignment and domain information |
|---|
| >PRK15347 two component system sensor kinase SsrA; Provisional | Back alignment and domain information |
|---|
| >KOG1977 consensus DNA mismatch repair protein - MLH3 family [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PRK09303 adaptive-response sensory kinase; Validated | Back alignment and domain information |
|---|
| >PRK11466 hybrid sensory histidine kinase TorS; Provisional | Back alignment and domain information |
|---|
| >PRK15053 dpiB sensor histidine kinase DpiB; Provisional | Back alignment and domain information |
|---|
| >PRK09467 envZ osmolarity sensor protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02956 TMAO_torS TMAO reductase sytem sensor TorS | Back alignment and domain information |
|---|
| >PRK11091 aerobic respiration control sensor protein ArcB; Provisional | Back alignment and domain information |
|---|
| >TIGR03785 marine_sort_HK proteobacterial dedicated sortase system histidine kinase | Back alignment and domain information |
|---|
| >COG0642 BaeS Signal transduction histidine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK13837 two-component VirA-like sensor kinase; Provisional | Back alignment and domain information |
|---|
| >PRK10337 sensor protein QseC; Provisional | Back alignment and domain information |
|---|
| >COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK10490 sensor protein KdpD; Provisional | Back alignment and domain information |
|---|
| >PRK09835 sensor kinase CusS; Provisional | Back alignment and domain information |
|---|
| >PRK11107 hybrid sensory histidine kinase BarA; Provisional | Back alignment and domain information |
|---|
| >PRK10618 phosphotransfer intermediate protein in two-component regulatory system with RcsBC; Provisional | Back alignment and domain information |
|---|
| >PRK10841 hybrid sensory kinase in two-component regulatory system with RcsB and YojN; Provisional | Back alignment and domain information |
|---|
| >PRK03660 anti-sigma F factor; Provisional | Back alignment and domain information |
|---|
| >TIGR01925 spIIAB anti-sigma F factor | Back alignment and domain information |
|---|
| >PRK10547 chemotaxis protein CheA; Provisional | Back alignment and domain information |
|---|
| >PRK09959 hybrid sensory histidine kinase in two-component regulatory system with EvgA; Provisional | Back alignment and domain information |
|---|
| >COG3290 CitA Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK10600 nitrate/nitrite sensor protein NarX; Provisional | Back alignment and domain information |
|---|
| >PRK13557 histidine kinase; Provisional | Back alignment and domain information |
|---|
| >PRK11073 glnL nitrogen regulation protein NR(II); Provisional | Back alignment and domain information |
|---|
| >TIGR01058 parE_Gpos DNA topoisomerase IV, B subunit, Gram-positive | Back alignment and domain information |
|---|
| >COG0187 GyrB Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >KOG0787 consensus Dehydrogenase kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG1979 consensus DNA mismatch repair protein - MLH1 family [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PLN03128 DNA topoisomerase 2; Provisional | Back alignment and domain information |
|---|
| >COG5000 NtrY Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK04069 serine-protein kinase RsbW; Provisional | Back alignment and domain information |
|---|
| >COG3920 Signal transduction histidine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PTZ00108 DNA topoisomerase 2-like protein; Provisional | Back alignment and domain information |
|---|
| >PLN03237 DNA topoisomerase 2; Provisional | Back alignment and domain information |
|---|
| >PRK13560 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PHA02569 39 DNA topoisomerase II large subunit; Provisional | Back alignment and domain information |
|---|
| >PRK11644 sensory histidine kinase UhpB; Provisional | Back alignment and domain information |
|---|
| >COG0643 CheA Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG2205 KdpD Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PTZ00109 DNA gyrase subunit b; Provisional | Back alignment and domain information |
|---|
| >COG4585 Signal transduction histidine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF13581 HATPase_c_2: Histidine kinase-like ATPase domain | Back alignment and domain information |
|---|
| >COG3850 NarQ Signal transduction histidine kinase, nitrate/nitrite-specific [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >TIGR01924 rsbW_low_gc serine-protein kinase RsbW | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 766 | ||||
| 2o1u_A | 666 | Structure Of Full Length Grp94 With Amp-Pnp Bound L | 1e-152 | ||
| 2o1w_A | 506 | Structure Of N-Terminal Plus Middle Domains (N+m) O | 1e-123 | ||
| 2iop_A | 624 | Crystal Structure Of Full-Length Htpg, The Escheric | 1e-106 | ||
| 2o1t_A | 450 | Structure Of Middle Plus C-Terminal Domains (M+c) O | 1e-102 | ||
| 1y4s_A | 559 | Conformation Rearrangement Of Heat Shock Protein 90 | 1e-101 | ||
| 3hjc_A | 444 | Crystal Structure Of The Carboxy-Terminal Domain Of | 1e-100 | ||
| 3q6m_A | 448 | Crystal Structure Of Human Mc-Hsp90 In C2221 Space | 1e-100 | ||
| 2cg9_A | 677 | Crystal Structure Of An Hsp90-Sba1 Closed Chaperone | 2e-95 | ||
| 2cge_A | 405 | Crystal Structure Of An Hsp90-Sba1 Closed Chaperone | 1e-94 | ||
| 1hk7_A | 288 | Middle Domain Of Hsp90 Length = 288 | 4e-67 | ||
| 3pry_A | 268 | Crystal Structure Of The Middle Domain Of Human Hsp | 4e-67 | ||
| 1usu_A | 260 | The Structure Of The Complex Between Aha1 And Hsp90 | 2e-64 | ||
| 1usv_A | 260 | The Structure Of The Complex Between Aha1 And Hsp90 | 4e-64 | ||
| 1y6z_A | 263 | Middle Domain Of Plasmodium Falciparum Putative Hea | 9e-59 | ||
| 2gq0_A | 303 | Crystal Structure Of The Middle Domain Of Htpg, The | 6e-55 | ||
| 3peh_A | 281 | Crystal Structure Of The N-Terminal Domain Of An Hs | 1e-45 | ||
| 3h80_A | 231 | Crystal Structure Of The Amino-Terminal Domain Of H | 2e-44 | ||
| 1u2o_A | 236 | Crystal Structure Of The N-Domain Of Grp94 Lacking | 1e-43 | ||
| 1qy5_A | 269 | Crystal Structure Of The N-Domain Of The Er Hsp90 C | 1e-43 | ||
| 1u0y_A | 273 | N-Domain Of Grp94, With The Charged Domain, In Comp | 1e-43 | ||
| 2esa_A | 236 | Grp94 N-Terminal Domain Bound To Geldanamycin: Effe | 3e-43 | ||
| 2ye7_A | 252 | Hsp90 Inhibitors And Drugs From Fragment And Virtua | 7e-42 | ||
| 2ye2_A | 252 | Hsp90 Inhibitors And Drugs From Fragment And Virtua | 7e-42 | ||
| 4egh_A | 232 | Hsp90-Alpha Atpase Domain In Complex With (4-Hydrox | 8e-42 | ||
| 3inw_A | 228 | Hsp90 N-Terminal Domain With Pochoxime A Length = 2 | 8e-42 | ||
| 1uyi_A | 236 | Human Hsp90-Alpha With 8-(2,5-Dimethoxy-Benzyl)-2-F | 9e-42 | ||
| 1uy6_A | 236 | Human Hsp90-Alpha With 9-Butyl-8-(3,4,5-Trimethoxy- | 9e-42 | ||
| 2xjj_A | 249 | Structre Of Hsp90 With Small Molecule Inhibitor Bou | 9e-42 | ||
| 3bm9_A | 226 | Discovery Of Benzisoxazoles As Potent Inhibitors Of | 9e-42 | ||
| 3b24_A | 229 | Hsp90 Alpha N-Terminal Domain In Complex With An Am | 9e-42 | ||
| 4awo_A | 230 | Complex Of Hsp90 Atpase Domain With Tropane Derived | 9e-42 | ||
| 3qdd_A | 237 | Hsp90a N-Terminal Domain In Complex With Biib021 Le | 9e-42 | ||
| 4eeh_A | 229 | Hsp90 Alpha N-Terminal Domain In Complex With An In | 9e-42 | ||
| 3r4m_A | 228 | Optimization Of Potent, Selective, And Orally Bioav | 9e-42 | ||
| 2bsm_A | 235 | Novel, Potent Small Molecule Inhibitors Of The Mole | 9e-42 | ||
| 3d0b_A | 232 | Crystal Structure Of Benzamide Tetrahydro-4h-Carbaz | 1e-41 | ||
| 3ft5_A | 249 | Structure Of Hsp90 Bound With A Novel Fragment Leng | 1e-41 | ||
| 2fwy_A | 256 | Structure Of Human Hsp90-Alpha Bound To The Potent | 1e-41 | ||
| 3k97_A | 251 | Hsp90 N-Terminal Domain In Complex With 4-Chloro-6- | 1e-41 | ||
| 1yc1_A | 264 | Crystal Structures Of Human Hsp90alpha Complexed Wi | 2e-41 | ||
| 2jki_A | 223 | Complex Of Hsp90 N-terminal And Sgt1 Cs Domain Leng | 2e-41 | ||
| 2ccs_A | 236 | Human Hsp90 With 4-Chloro-6-(4-Piperazin-1-Yl-1h-Py | 2e-41 | ||
| 1byq_A | 228 | Hsp90 N-Terminal Domain Bound To Adp-Mg Length = 22 | 2e-41 | ||
| 2xjg_A | 249 | Structure Of Hsp90 With Small Molecule Inhibitor Bo | 2e-41 | ||
| 2yi0_A | 229 | Structural Characterization Of 5-Aryl-4-(5-Substitu | 3e-41 | ||
| 2yee_A | 252 | Hsp90 Inhibitors And Drugs From Fragment And Virtua | 3e-41 | ||
| 1uym_A | 220 | Human Hsp90-Beta With Pu3 (9-Butyl-8(3,4,5-Trimetho | 3e-41 | ||
| 3nmq_A | 239 | Hsp90b N-Terminal Domain In Complex With Ec44, A Py | 5e-41 | ||
| 4gqt_A | 227 | N-Terminal Domain Of C. Elegans Hsp90 Length = 227 | 9e-41 | ||
| 3tuh_A | 209 | Crystal Structure Of The N-Terminal Domain Of An Hs | 1e-40 | ||
| 2xcm_A | 214 | Complex Of Hsp90 N-Terminal, Sgt1 Cs And Rar1 Chord | 1e-40 | ||
| 3hhu_A | 224 | Human Heat-Shock Protein 90 (Hsp90) In Complex With | 1e-40 | ||
| 2xdu_A | 236 | Structre Of Hsp90 With Small Molecule Inhibitor Bou | 1e-40 | ||
| 3k98_A | 232 | Hsp90 N-Terminal Domain In Complex With (1r)-2-(5-C | 1e-40 | ||
| 3eko_A | 226 | Dihydroxylphenyl Amides As Inhibitors Of The Hsp90 | 1e-40 | ||
| 2qfo_A | 207 | Hsp90 Complexed With A143571 And A516383 Length = 2 | 3e-40 | ||
| 2yjw_A | 209 | Tricyclic Series Of Hsp90 Inhibitors Length = 209 | 3e-40 | ||
| 1osf_A | 215 | Human Hsp90 In Complex With 17-desmethoxy-17-n,n- D | 3e-40 | ||
| 2jjc_A | 218 | Hsp90 Alpha Atpase Domain With Bound Small Molecule | 3e-40 | ||
| 2xx2_A | 214 | Macrolactone Inhibitor Bound To Hsp90 N-Term Length | 4e-40 | ||
| 1am1_A | 213 | Atp Binding Site In The Hsp90 Molecular Chaperone L | 4e-40 | ||
| 1bgq_A | 225 | Radicicol Bound To The Atp Binding Site Of The N-Te | 4e-40 | ||
| 2bre_A | 219 | Structure Of A Hsp90 Inhibitor Bound To The N-Termi | 4e-40 | ||
| 2cgf_A | 225 | A Radicicol Analogue Bound To The Atp Binding Site | 4e-40 | ||
| 1us7_A | 214 | Complex Of Hsp90 And P50 Length = 214 | 4e-40 | ||
| 1ah8_A | 220 | Structure Of The Orthorhombic Form Of The N-Termina | 4e-40 | ||
| 1a4h_A | 230 | Structure Of The N-Terminal Domain Of The Yeast Hsp | 5e-40 | ||
| 2wep_A | 220 | Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With Adp | 5e-40 | ||
| 2qf6_A | 207 | Hsp90 Complexed With A56322 Length = 207 | 6e-40 | ||
| 2k5b_A | 210 | Human Cdc37-Hsp90 Docking Model Based On Nmr Length | 6e-40 | ||
| 1zw9_A | 240 | Yeast Hsp82 In Complex With The Novel Hsp90 Inhibit | 7e-40 | ||
| 3opd_A | 231 | Crystal Structure Of The N-Terminal Domain Of An Hs | 7e-40 | ||
| 3o6o_A | 214 | Crystal Structure Of The N-Terminal Domain Of An Hs | 7e-40 | ||
| 2yge_A | 220 | E88g-n92l Mutant Of N-term Hsp90 Complexed With Gel | 1e-39 | ||
| 2ygf_A | 220 | L89v, L93i And V136m Mutant Of N-term Hsp90 Complex | 2e-39 | ||
| 3c0e_A | 240 | Yeast Hsp82 N-Terminal Domain: Effects Of Mutants 9 | 2e-39 | ||
| 2yga_A | 220 | E88g-n92l Mutant Of N-term Hsp90 Complexed With Gel | 2e-39 | ||
| 3k60_B | 223 | Crystal Structure Of N-Terminal Domain Of Plasmodiu | 2e-38 | ||
| 2ior_A | 235 | Crystal Structure Of The N-Terminal Domain Of Htpg, | 7e-35 | ||
| 2akp_A | 186 | Hsp90 Delta24-n210 Mutant Length = 186 | 1e-31 | ||
| 3ied_A | 272 | Crystal Structure Of N-Terminal Domain Of Plasmodiu | 8e-31 |
| >pdb|2O1U|A Chain A, Structure Of Full Length Grp94 With Amp-Pnp Bound Length = 666 | Back alignment and structure |
|
| >pdb|2O1W|A Chain A, Structure Of N-Terminal Plus Middle Domains (N+m) Of Grp94 Length = 506 | Back alignment and structure |
| >pdb|2IOP|A Chain A, Crystal Structure Of Full-Length Htpg, The Escherichia Coli Hsp90, Bound To Adp Length = 624 | Back alignment and structure |
| >pdb|2O1T|A Chain A, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94 Length = 450 | Back alignment and structure |
| >pdb|1Y4S|A Chain A, Conformation Rearrangement Of Heat Shock Protein 90 Upon Adp Binding Length = 559 | Back alignment and structure |
| >pdb|3HJC|A Chain A, Crystal Structure Of The Carboxy-Terminal Domain Of Hsp90 From Leishmania Major, Lmjf33.0312 Length = 444 | Back alignment and structure |
| >pdb|3Q6M|A Chain A, Crystal Structure Of Human Mc-Hsp90 In C2221 Space Group Length = 448 | Back alignment and structure |
| >pdb|2CG9|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex Length = 677 | Back alignment and structure |
| >pdb|2CGE|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex Length = 405 | Back alignment and structure |
| >pdb|1HK7|A Chain A, Middle Domain Of Hsp90 Length = 288 | Back alignment and structure |
| >pdb|3PRY|A Chain A, Crystal Structure Of The Middle Domain Of Human Hsp90-Beta Refined At 2.3 A Resolution Length = 268 | Back alignment and structure |
| >pdb|1USU|A Chain A, The Structure Of The Complex Between Aha1 And Hsp90 Length = 260 | Back alignment and structure |
| >pdb|1USV|A Chain A, The Structure Of The Complex Between Aha1 And Hsp90 Length = 260 | Back alignment and structure |
| >pdb|1Y6Z|A Chain A, Middle Domain Of Plasmodium Falciparum Putative Heat Shock Protein Pf14_0417 Length = 263 | Back alignment and structure |
| >pdb|2GQ0|A Chain A, Crystal Structure Of The Middle Domain Of Htpg, The E. Coli Hsp90 Length = 303 | Back alignment and structure |
| >pdb|3PEH|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From Plasmodium Falciparum, Pfl1070c In The Presence Of A Thienopyrimidine Derivative Length = 281 | Back alignment and structure |
| >pdb|3H80|A Chain A, Crystal Structure Of The Amino-Terminal Domain Of Hsp90 From Leishmania Major, Lmjf33.0312:m1-K213 Length = 231 | Back alignment and structure |
| >pdb|1U2O|A Chain A, Crystal Structure Of The N-Domain Of Grp94 Lacking The Charged Domain In Complex With Neca Length = 236 | Back alignment and structure |
| >pdb|1QY5|A Chain A, Crystal Structure Of The N-Domain Of The Er Hsp90 Chaperone Grp94 In Complex With The Specific Ligand Neca Length = 269 | Back alignment and structure |
| >pdb|1U0Y|A Chain A, N-Domain Of Grp94, With The Charged Domain, In Complex With The Novel Ligand N-Propyl Carboxyamido Adenosine Length = 273 | Back alignment and structure |
| >pdb|2ESA|A Chain A, Grp94 N-Terminal Domain Bound To Geldanamycin: Effects Of Mutants 168- 169 Ks-Aa Length = 236 | Back alignment and structure |
| >pdb|2YE7|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual Screening Length = 252 | Back alignment and structure |
| >pdb|2YE2|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual Screening Length = 252 | Back alignment and structure |
| >pdb|4EGH|A Chain A, Hsp90-Alpha Atpase Domain In Complex With (4-Hydroxyphenyl)morpholin- 4-Yl Methanone Length = 232 | Back alignment and structure |
| >pdb|3INW|A Chain A, Hsp90 N-Terminal Domain With Pochoxime A Length = 228 | Back alignment and structure |
| >pdb|1UYI|A Chain A, Human Hsp90-Alpha With 8-(2,5-Dimethoxy-Benzyl)-2-Fluoro-9- Pent-9h-Purin-6-Ylamine Length = 236 | Back alignment and structure |
| >pdb|1UY6|A Chain A, Human Hsp90-Alpha With 9-Butyl-8-(3,4,5-Trimethoxy-Benzyl)-9h-Purin-6-Ylamine Length = 236 | Back alignment and structure |
| >pdb|2XJJ|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound Length = 249 | Back alignment and structure |
| >pdb|3BM9|A Chain A, Discovery Of Benzisoxazoles As Potent Inhibitors Of Chaperone Hsp90 Length = 226 | Back alignment and structure |
| >pdb|3B24|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Aminotriazine Fragment Molecule Length = 229 | Back alignment and structure |
| >pdb|4AWO|A Chain A, Complex Of Hsp90 Atpase Domain With Tropane Derived Inhibitors Length = 230 | Back alignment and structure |
| >pdb|3QDD|A Chain A, Hsp90a N-Terminal Domain In Complex With Biib021 Length = 237 | Back alignment and structure |
| >pdb|4EEH|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor 3-(4- Hydroxy-Phenyl)-1h-Indazol-6-Ol Length = 229 | Back alignment and structure |
| >pdb|3R4M|A Chain A, Optimization Of Potent, Selective, And Orally Bioavailable Pyrrolodinopyrimidine-Containing Inhibitors Of Heat Shock Protein 90. Identification Of Development Candidate 2-Amino-4-{4-Chloro-2-[2-(4- Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2- Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3, 4-D]pyrimidine-6-Carboxamide Length = 228 | Back alignment and structure |
| >pdb|2BSM|A Chain A, Novel, Potent Small Molecule Inhibitors Of The Molecular Chaperone Hsp90 Discovered Through Structure-Based Design Length = 235 | Back alignment and structure |
| >pdb|3D0B|A Chain A, Crystal Structure Of Benzamide Tetrahydro-4h-Carbazol-4-One Bound To Hsp90 Length = 232 | Back alignment and structure |
| >pdb|3FT5|A Chain A, Structure Of Hsp90 Bound With A Novel Fragment Length = 249 | Back alignment and structure |
| >pdb|2FWY|A Chain A, Structure Of Human Hsp90-Alpha Bound To The Potent Water Soluble Inhibitor Pu-H64 Length = 256 | Back alignment and structure |
| >pdb|3K97|A Chain A, Hsp90 N-Terminal Domain In Complex With 4-Chloro-6-{[(2r)-2- (2-Methylphenyl)pyrrolidin-1-Yl]carbonyl}benzene-1, 3-Diol Length = 251 | Back alignment and structure |
| >pdb|1YC1|A Chain A, Crystal Structures Of Human Hsp90alpha Complexed With Dihydroxyphenylpyrazoles Length = 264 | Back alignment and structure |
| >pdb|2JKI|A Chain A, Complex Of Hsp90 N-terminal And Sgt1 Cs Domain Length = 223 | Back alignment and structure |
| >pdb|2CCS|A Chain A, Human Hsp90 With 4-Chloro-6-(4-Piperazin-1-Yl-1h-Pyrazol-3- Yl)-Benzene-1,2-Diol Length = 236 | Back alignment and structure |
| >pdb|1BYQ|A Chain A, Hsp90 N-Terminal Domain Bound To Adp-Mg Length = 228 | Back alignment and structure |
| >pdb|2XJG|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound Length = 249 | Back alignment and structure |
| >pdb|2YI0|A Chain A, Structural Characterization Of 5-Aryl-4-(5-Substituted-2-4- Dihydroxyphenyl)-1,2,3-Thiadiazole Hsp90 Inhibitors. Length = 229 | Back alignment and structure |
| >pdb|2YEE|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual Screening Length = 252 | Back alignment and structure |
| >pdb|1UYM|A Chain A, Human Hsp90-Beta With Pu3 (9-Butyl-8(3,4,5-Trimethoxy-Benzyl)-9h-Purin-6-Ylamine) Length = 220 | Back alignment and structure |
| >pdb|3NMQ|A Chain A, Hsp90b N-Terminal Domain In Complex With Ec44, A Pyrrolo-Pyrimidine Methoxypyridine Inhibitor Length = 239 | Back alignment and structure |
| >pdb|4GQT|A Chain A, N-Terminal Domain Of C. Elegans Hsp90 Length = 227 | Back alignment and structure |
| >pdb|3TUH|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 In The Presence Of An The Inhibitor Ganetespib Length = 209 | Back alignment and structure |
| >pdb|2XCM|A Chain A, Complex Of Hsp90 N-Terminal, Sgt1 Cs And Rar1 Chord2 Domain Length = 214 | Back alignment and structure |
| >pdb|3HHU|A Chain A, Human Heat-Shock Protein 90 (Hsp90) In Complex With {4-[3- (2,4-Dihydroxy-5-Isopropyl-Phenyl)-5-Thioxo- 1,5-Dihydro- [1,2,4]triazol-4-Yl]-Benzyl}-Carbamic Acid Ethyl Ester {zk 2819} Length = 224 | Back alignment and structure |
| >pdb|2XDU|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound Length = 236 | Back alignment and structure |
| >pdb|3K98|A Chain A, Hsp90 N-Terminal Domain In Complex With (1r)-2-(5-Chloro-2, 4-Dihydroxybenzoyl)-N-Ethylisoindoline-1-Carboxamide Length = 232 | Back alignment and structure |
| >pdb|3EKO|A Chain A, Dihydroxylphenyl Amides As Inhibitors Of The Hsp90 Molecular Chaperone Length = 226 | Back alignment and structure |
| >pdb|2QFO|A Chain A, Hsp90 Complexed With A143571 And A516383 Length = 207 | Back alignment and structure |
| >pdb|2YJW|A Chain A, Tricyclic Series Of Hsp90 Inhibitors Length = 209 | Back alignment and structure |
| >pdb|1OSF|A Chain A, Human Hsp90 In Complex With 17-desmethoxy-17-n,n- Dimethylaminoethylamino-geldanamycin Length = 215 | Back alignment and structure |
| >pdb|2JJC|A Chain A, Hsp90 Alpha Atpase Domain With Bound Small Molecule Fragment Length = 218 | Back alignment and structure |
| >pdb|2XX2|A Chain A, Macrolactone Inhibitor Bound To Hsp90 N-Term Length = 214 | Back alignment and structure |
| >pdb|1AM1|A Chain A, Atp Binding Site In The Hsp90 Molecular Chaperone Length = 213 | Back alignment and structure |
| >pdb|1BGQ|A Chain A, Radicicol Bound To The Atp Binding Site Of The N-Terminal Domain Of The Yeast Hsp90 Chaperone Length = 225 | Back alignment and structure |
| >pdb|2BRE|A Chain A, Structure Of A Hsp90 Inhibitor Bound To The N-Terminus Of Yeast Hsp90. Length = 219 | Back alignment and structure |
| >pdb|2CGF|A Chain A, A Radicicol Analogue Bound To The Atp Binding Site Of The N- Terminal Domain Of The Yeast Hsp90 Chaperone Length = 225 | Back alignment and structure |
| >pdb|1US7|A Chain A, Complex Of Hsp90 And P50 Length = 214 | Back alignment and structure |
| >pdb|1AH8|A Chain A, Structure Of The Orthorhombic Form Of The N-Terminal Domain Of The Yeast Hsp90 Chaperone Length = 220 | Back alignment and structure |
| >pdb|1A4H|A Chain A, Structure Of The N-Terminal Domain Of The Yeast Hsp90 Chaperone In Complex With Geldanamycin Length = 230 | Back alignment and structure |
| >pdb|2WEP|A Chain A, Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With Adp Length = 220 | Back alignment and structure |
| >pdb|2QF6|A Chain A, Hsp90 Complexed With A56322 Length = 207 | Back alignment and structure |
| >pdb|2K5B|A Chain A, Human Cdc37-Hsp90 Docking Model Based On Nmr Length = 210 | Back alignment and structure |
| >pdb|1ZW9|A Chain A, Yeast Hsp82 In Complex With The Novel Hsp90 Inhibitor 8-(6-Bromo- Benzo[1, 3]dioxol-5-Ylsulfanyl)-9-(3-Isopropylamino-Propyl)- Adenine Length = 240 | Back alignment and structure |
| >pdb|3OPD|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of A Benzamide Derivative Length = 231 | Back alignment and structure |
| >pdb|3O6O|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of An The Inhibitor Biib021 Length = 214 | Back alignment and structure |
| >pdb|2YGE|A Chain A, E88g-n92l Mutant Of N-term Hsp90 Complexed With Geldanamycin Length = 220 | Back alignment and structure |
| >pdb|2YGF|A Chain A, L89v, L93i And V136m Mutant Of N-term Hsp90 Complexed With Geldanamycin Length = 220 | Back alignment and structure |
| >pdb|3C0E|A Chain A, Yeast Hsp82 N-Terminal Domain: Effects Of Mutants 98-99 Ks- Aa Length = 240 | Back alignment and structure |
| >pdb|2YGA|A Chain A, E88g-n92l Mutant Of N-term Hsp90 Complexed With Geldanamycin Length = 220 | Back alignment and structure |
| >pdb|3K60|B Chain B, Crystal Structure Of N-Terminal Domain Of Plasmodium Falciparum Hsp90 (Pf07_0029) Bound To Adp Length = 223 | Back alignment and structure |
| >pdb|2IOR|A Chain A, Crystal Structure Of The N-Terminal Domain Of Htpg, The Escherichia Coli Hsp90, Bound To Adp Length = 235 | Back alignment and structure |
| >pdb|2AKP|A Chain A, Hsp90 Delta24-n210 Mutant Length = 186 | Back alignment and structure |
| >pdb|3IED|A Chain A, Crystal Structure Of N-Terminal Domain Of Plasmodium Falciparum Hsp90 (Pf14_0417) In Complex With Amppn Length = 272 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A Length = 666 | Back alignment and structure |
|---|
Score = 861 bits (2228), Expect = 0.0
Identities = 298/685 (43%), Positives = 417/685 (60%), Gaps = 62/685 (9%)
Query: 65 RCDAAVADKEAPDTSGEKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRF 124
+ EKF +QAEV+R+M LI++SLY +KE+FLREL+SNASDALDK+R
Sbjct: 7 HHHHSSGLVPRGSHMSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRL 66
Query: 125 LSVTEPSLLGDAGDLEIRIKPDPENGTITITDTGIGMTKEELVDCLGTIAQSGTSKFLKA 184
+S+T+ + L +L ++IK D E + +TDTG+GMT+EELV LGTIA+SGTS+FL
Sbjct: 67 ISLTDENALAGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNK 126
Query: 185 LKEN-NDLGADNGLIGQFGVGFYSAFLVAQKVE-----------------------ETDP 220
+ E D + + LIGQFGVGFYSAFLVA KV
Sbjct: 127 MTEAQEDGQSTSELIGQFGVGFYSAFLVADKVIVTSKHNNDTQHIWESDSNEFSVIADPR 186
Query: 221 EKLLKRGTQITLYLKEDDKYEFSEPTRIQGLVKNYSQFVSFPIYTWQEKSRTIEVEEEEK 280
L RGT ITL LKE+ ++ E I+ LVK YSQF++FPIY W K+
Sbjct: 187 GNTLGRGTTITLVLKEEAS-DYLELDTIKNLVKKYSQFINFPIYVWSSKTG--------- 236
Query: 281 PEEGEEQPEGEKKTKKTTKTEKYWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFL 340
+ WDWEL N+ KPIW R KE+E DEY FYK E
Sbjct: 237 -----------------GGGKTVWDWELMNDIKPIWQRPSKEVEDDEYKAFYKSFSKESD 279
Query: 341 DPLAYTHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTK-NIRLYVKRVFISDDFDGELF 399
DP+AY HFT EGEV F+S+L++P P + K I+LYV+RVFI+DDF ++
Sbjct: 280 DPMAYIHFTAEGEVTFKSILFVPTSAPRGLFDEYGSKKSDYIKLYVRRVFITDDFH-DMM 338
Query: 400 PRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKK 459
P+YL+FVKGVVDSDDLPLNVSRE LQ+ ++++++RK+LVRKT DMI+ I+ +++
Sbjct: 339 PKYLNFVKGVVDSDDLPLNVSRETLQQHKLLKVIRKKLVRKTLDMIKKIA---DEKYNDT 395
Query: 460 FWENFGRFLKLGCVEDSGNHKRLAPLLRFYTSKSEEELISLDEYVENMGEKQNAIYYLAT 519
FW+ FG +KLG +ED N RLA LLRF +S ++ SLD+YVE M EKQ+ IY++A
Sbjct: 396 FWKEFGTNIKLGVIEDHSNRTRLAKLLRFQSSHHPSDITSLDQYVERMKEKQDKIYFMAG 455
Query: 520 DSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDE 579
S K A+S+PF+E+L++K EV+YL EP+DE IQ L F+ K+F +++KE ++ + ++
Sbjct: 456 SSRKEAESSPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFDESEK 515
Query: 580 VKER--ETKQEFNLLCDWIKQQ-LGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMK 636
KE ++EF L +W+K + L DK+ K VS+RL+ SPC LV+ ++GWS NMER+MK
Sbjct: 516 TKESREAIEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWSGNMERIMK 575
Query: 637 AQAL---GDTSSLEFMRGRRILEINPDHPIVKDLNAACKNAPDSTDAKRAVDLLYDTALI 693
AQA D S+ + ++ EINP HP++KD+ K D +L++TA +
Sbjct: 576 AQAYQTGKDISTNYYASQKKTFEINPRHPLIKDMLRRVKEDEDDKTVSDLAVVLFETATL 635
Query: 694 SSGFTPDSPADLGNKIYEMMAMALG 718
SG+ G++I M+ ++L
Sbjct: 636 RSGYLLPDTKAYGDRIERMLRLSLN 660
|
| >2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} Length = 677 | Back alignment and structure |
|---|
| >2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A Length = 624 | Back alignment and structure |
|---|
| >1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A Length = 559 | Back alignment and structure |
|---|
| >3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major} Length = 444 | Back alignment and structure |
|---|
| >3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A Length = 448 | Back alignment and structure |
|---|
| >2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae} Length = 405 | Back alignment and structure |
|---|
| >1hk7_A Heat shock protein HSP82; ATPase, chaperone; 2.5A {Saccharomyces cerevisiae} SCOP: d.14.1.8 Length = 288 | Back alignment and structure |
|---|
| >3pry_A Heat shock protein HSP 90-beta; structural genomics, structural genomics consortium, SGC, HE protein, chaperone; 2.28A {Homo sapiens} Length = 268 | Back alignment and structure |
|---|
| >2gq0_A Chaperone protein HTPG; molecular chaperone, HSP90, E. coli, hydrolase; 1.90A {Escherichia coli} Length = 303 | Back alignment and structure |
|---|
| >1usu_A Heat shock protein HSP82; chaperone/complex, chaperone, activator, HSP90; 2.15A {Saccharomyces cerevisiae} SCOP: d.14.1.8 PDB: 1usv_A Length = 260 | Back alignment and structure |
|---|
| >1y6z_A Heat shock protein, putative; chaperone, structural genomics, structural genom consortium, SGC, unknown function; 1.88A {Plasmodium falciparum} Length = 263 | Back alignment and structure |
|---|
| >3peh_A Endoplasmin homolog; structural genomics, structural genomics consortium, SGC, HE protein, chaperone, ATP binding; HET: IBD; 2.75A {Plasmodium falciparum 3D7} PDB: 3pej_A* Length = 281 | Back alignment and structure |
|---|
| >1qy5_A Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: NEC; 1.75A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1qy8_A* 1qye_A* 1u0y_A* 1yt2_A* Length = 269 | Back alignment and structure |
|---|
| >2gqp_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, ligand, NECA, NPCA, adenosine; HET: PA7 PG4 1PE; 1.50A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1tc0_A* 1tbw_A* 1u0z_A* 1u2o_A* 1ysz_A* 1yt0_A* 1yt1_A* 2exl_A* 2fyp_A* 2gfd_A* 1tc6_A* 2h8m_A* 2hch_A* 2hg1_A* 3o2f_A* 2esa_A* Length = 236 | Back alignment and structure |
|---|
| >1yc1_A HSP 86, heat shock protein HSP 90-alpha; cell-cycle, cancer, drug design, cell cycle; HET: 4BC; 1.70A {Homo sapiens} SCOP: d.122.1.1 PDB: 1yc3_A* 1yc4_A* Length = 264 | Back alignment and structure |
|---|
| >3t0h_A Heat shock protein HSP 90-alpha; chaperone, ATPase; 1.20A {Homo sapiens} PDB: 3r4m_A 3t0z_A* 3t10_A* 3t1k_A* 3t2s_A* 1uyl_A 1uy7_A* 1uy8_A* 1uy9_A* 1uyc_A* 1uyd_A* 1uye_A* 1uyf_A* 1uyg_A* 1uyh_A* 1uyk_A* 1uy6_A 2cdd_A* 2uwd_A* 2vci_A* ... Length = 228 | Back alignment and structure |
|---|
| >3nmq_A Heat shock protein HSP 90-beta; ATPase, chaperone-chaperone inhibitor complex; HET: 7PP; 2.20A {Homo sapiens} Length = 239 | Back alignment and structure |
|---|
| >3o0i_A HSP90AA1 protein; HSP90 heat-shock proteins, chaperone-inhibitor complex; HET: P54; 1.47A {Homo sapiens} PDB: 2fwz_A* 2fwy_A* 2h55_A* Length = 256 | Back alignment and structure |
|---|
| >2wer_A ATP-dependent molecular chaperone HSP82; ATPase, ATP-binding, phosphoprotein, stress respo nucleotide-binding; HET: RDC; 1.60A {Saccharomyces cerevisiae} PDB: 2weq_A* 2wep_A* 1zwh_A* 1zw9_A* 2fxs_A* 3c11_A* 3c0e_A* 2yge_A* 2ygf_A* 2akp_A Length = 220 | Back alignment and structure |
|---|
| >2ior_A Chaperone protein HTPG; heat shock protein, HSP90; HET: ADP; 1.65A {Escherichia coli} Length = 235 | Back alignment and structure |
|---|
| >3ied_A Heat shock protein; HSP90, chaperone, structural genomics, structura genomics consortium, SGC, stress response; HET: AN2; 2.01A {Plasmodium falciparum} Length = 272 | Back alignment and structure |
|---|
| >1sf8_A Chaperone protein HTPG; four helix bundle dimerization interface, exposed amphipathic helix, three stranded beta sheet; 2.60A {Escherichia coli} SCOP: d.271.1.1 Length = 126 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 766 | |||
| 2cg9_A | 677 | ATP-dependent molecular chaperone HSP82; chaperone | 100.0 | |
| 2o1u_A | 666 | Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, | 100.0 | |
| 2ioq_A | 624 | Chaperone protein HTPG; heat shock protein, HSP90; | 100.0 | |
| 1y4s_A | 559 | Chaperone protein HTPG; HSP90, molecular chaperone | 100.0 | |
| 3q6m_A | 448 | Heat shock protein HSP 90-alpha; three domains, tr | 100.0 | |
| 3hjc_A | 444 | Heat shock protein 83-1; sleeping sickness, struct | 100.0 | |
| 2cge_A | 405 | ATP-dependent molecular chaperone HSP82; chaperone | 100.0 | |
| 1hk7_A | 288 | Heat shock protein HSP82; ATPase, chaperone; 2.5A | 100.0 | |
| 2gq0_A | 303 | Chaperone protein HTPG; molecular chaperone, HSP90 | 100.0 | |
| 3pry_A | 268 | Heat shock protein HSP 90-beta; structural genomic | 100.0 | |
| 1usu_A | 260 | Heat shock protein HSP82; chaperone/complex, chape | 100.0 | |
| 1y6z_A | 263 | Heat shock protein, putative; chaperone, structura | 100.0 | |
| 3peh_A | 281 | Endoplasmin homolog; structural genomics, structur | 100.0 | |
| 3ied_A | 272 | Heat shock protein; HSP90, chaperone, structural g | 100.0 | |
| 1qy5_A | 269 | Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: N | 100.0 | |
| 3nmq_A | 239 | Heat shock protein HSP 90-beta; ATPase, chaperone- | 100.0 | |
| 3o0i_A | 256 | HSP90AA1 protein; HSP90 heat-shock proteins, chape | 100.0 | |
| 3t0h_A | 228 | Heat shock protein HSP 90-alpha; chaperone, ATPase | 100.0 | |
| 2gqp_A | 236 | Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, | 100.0 | |
| 1yc1_A | 264 | HSP 86, heat shock protein HSP 90-alpha; cell-cycl | 100.0 | |
| 2wer_A | 220 | ATP-dependent molecular chaperone HSP82; ATPase, A | 100.0 | |
| 2ior_A | 235 | Chaperone protein HTPG; heat shock protein, HSP90; | 100.0 | |
| 1sf8_A | 126 | Chaperone protein HTPG; four helix bundle dimeriza | 99.98 | |
| 1b63_A | 333 | MUTL; DNA mismatch repair, ATPase; HET: ANP; 1.90A | 99.42 | |
| 1h7s_A | 365 | PMS1 protein homolog 2; DNA repair, GHL ATPase, mi | 99.03 | |
| 3h4l_A | 367 | DNA mismatch repair protein PMS1; ATP binding, DNA | 98.77 | |
| 3na3_A | 348 | DNA mismatch repair protein MLH1; MUTL protein hom | 98.68 | |
| 3fv5_A | 201 | DNA topoisomerase 4 subunit B; topoisomerase IV B | 98.33 | |
| 1mu5_A | 471 | Type II DNA topoisomerase VI subunit B; GHKL ATPas | 98.33 | |
| 2zbk_B | 530 | Type 2 DNA topoisomerase 6 subunit B; DNA binding | 98.3 | |
| 1kij_A | 390 | DNA gyrase subunit B; topoisomerase, gyrase B-coum | 98.24 | |
| 1s16_A | 390 | Topoisomerase IV subunit B; two-domain protein com | 97.82 | |
| 2q2e_B | 621 | Type 2 DNA topoisomerase 6 subunit B; DNA-binding, | 97.81 | |
| 4duh_A | 220 | DNA gyrase subunit B; structure-based drug design, | 97.69 | |
| 1ei1_A | 391 | DNA gyrase B, GYRB; ATPase domain, dimer, isomeras | 97.69 | |
| 4emv_A | 226 | DNA topoisomerase IV, B subunit; protein-inhibitor | 97.57 | |
| 3jz3_A | 222 | Sensor protein QSEC; helix-turn-helix, kinase doma | 97.34 | |
| 1zxm_A | 400 | TOPO IIA ATPase, DNA topoisomerase II, alpha isozy | 97.32 | |
| 3cwv_A | 369 | DNA gyrase, B subunit, truncated; structural genom | 97.32 | |
| 3lnu_A | 408 | Topoisomerase IV subunit B; PARE, ATP-binding, nuc | 97.24 | |
| 1id0_A | 152 | PHOQ histidine kinase; PHOQ/PHOP, signal transduct | 97.24 | |
| 4ew8_A | 268 | Sensor protein DIVL; signal transduction, two-comp | 97.22 | |
| 2btz_A | 394 | Pyruvate dehydrogenase kinase isoenzyme 2; GHKL mo | 97.19 | |
| 1th8_A | 145 | Anti-sigma F factor; SPOIIAB, SPOIIAA, anti-ANTI-s | 97.17 | |
| 1ysr_A | 150 | Sensor-type histidine kinase PRRB; ATP-binding dom | 97.15 | |
| 3d36_A | 244 | Sporulation kinase B; GHKL ATPase, four helix bund | 97.15 | |
| 3sl2_A | 177 | Sensor histidine kinase YYCG; ATP binding, intact | 97.13 | |
| 3a0y_A | 152 | Sensor protein; ATP-LID, kinase, phosphoprotein, t | 97.13 | |
| 2q8g_A | 407 | [pyruvate dehydrogenase [lipoamide]] kinase isozy; | 97.1 | |
| 2e0a_A | 394 | Pyruvate dehydrogenase kinase isozyme 4; PDK4, ATP | 97.06 | |
| 1i58_A | 189 | Chemotaxis protein CHEA; beta-alpha sandwich, sign | 97.01 | |
| 1gkz_A | 388 | [3-methyl-2-oxobutanoate dehydrogenase [lipoamide] | 96.96 | |
| 1y8o_A | 419 | [pyruvate dehydrogenase [lipoamide]] kinase isozy; | 96.94 | |
| 1bxd_A | 161 | ENVZ(290-450), protein (osmolarity sensor protein | 96.89 | |
| 2c2a_A | 258 | Sensor histidine kinase; phosphotransfer, PHOQ, se | 96.78 | |
| 3ehh_A | 218 | Sensor kinase (YOCF protein); four-helix bundle, G | 96.76 | |
| 3ehg_A | 128 | Sensor kinase (YOCF protein); GHL ATPase domain, t | 96.76 | |
| 3a0r_A | 349 | Sensor protein; four helix bundle, PAS fold, kinas | 96.53 | |
| 1r62_A | 160 | Nitrogen regulation protein NR(II); PII, histidine | 96.42 | |
| 3zxo_A | 129 | Redox sensor histidine kinase response regulator; | 96.37 | |
| 1pvg_A | 418 | DNA topoisomerase II; GHKL ATPase domain; HET: DNA | 96.22 | |
| 1b3q_A | 379 | Protein (chemotaxis protein CHEA); histine kinase, | 96.14 | |
| 4gfh_A | 1177 | DNA topoisomerase 2; topoisomerase, protein-DNA co | 94.47 | |
| 3ttz_A | 198 | DNA gyrase subunit B; protein-inhibitor complex, A | 94.45 | |
| 3zxq_A | 124 | Hypoxia sensor histidine kinase response regulato; | 94.37 | |
| 4fpp_A | 247 | Phosphotransferase; four helix bundle, bergerat fo | 94.36 | |
| 3ke6_A | 399 | Protein RV1364C/MT1410; anti-sigma factor, anti-si | 82.22 |
| >2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-167 Score=1447.81 Aligned_cols=629 Identities=46% Similarity=0.796 Sum_probs=547.9
Q ss_pred ccccchhhhHHHHHHHHHHcCCCCchhHHHHhHHhHHHHHHHHHhhhccCCCCCCCCCCceEEEEecCCCcEEEEEeCCC
Q 004236 80 GEKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTEPSLLGDAGDLEIRIKPDPENGTITITDTGI 159 (766)
Q Consensus 80 ~e~~~Fqae~~~ll~ll~~~LYs~~~vflRELIqNA~DA~~k~r~~~~~~~~~~~~~~~~~I~I~~d~~~~~l~I~DnGi 159 (766)
.|+|+||||+++||+||+++||||+++|||||||||+||++|+||+++++++.+....++.|+|.+|+++++|+|+||||
T Consensus 3 ~e~~~Fqae~~~Ll~li~~sLYsnkeifLRELIsNA~DA~~k~r~~~ltd~~~~~~~~~~~I~I~~d~~~~~I~I~DnGi 82 (677)
T 2cg9_A 3 SETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLFIRITPKPEQKVLEIRDSGI 82 (677)
T ss_dssp CEEEECCCCHHHHHHHHHHSCCSCTTHHHHHHHHHHHHHHHHHHHHTSSCTTTTTTCCCCCEEEEEEGGGTEEEEEECSC
T ss_pred ccceehhhhHHHHHHHHHHhCCCCchHHHHHHhhCHHHHHHHHHHHhccChhhccCCCCcEEEEEEeCCCCEEEEEECCC
Confidence 48999999999999999999999999999999999999999999999999998888888999999998889999999999
Q ss_pred CCCHHHHHHhhhhhhccCcHHHHHHhhhcccCCCCCCcccccccceeeeeeecceeE--------------ecC------
Q 004236 160 GMTKEELVDCLGTIAQSGTSKFLKALKENNDLGADNGLIGQFGVGFYSAFLVAQKVE--------------ETD------ 219 (766)
Q Consensus 160 GMt~~el~~~L~tIa~Sg~~~f~~~~~~~~~~~~~~~~IGqFGIGf~S~Fmvad~Ve--------------s~~------ 219 (766)
|||++||.++|++||.||++.|+++++ .+.+...||||||||||+||||++|+ +++
T Consensus 83 GMt~edl~~~l~tIA~Sgt~~f~~kl~----~~~d~~~IGqFGvGFySaf~vadkV~V~Sk~~~~~~~~W~s~g~~~~ti 158 (677)
T 2cg9_A 83 GMTKAELINNLGTIAKSGTKAFMEALS----AGADVSMIGQFGVGFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTV 158 (677)
T ss_dssp CCCHHHHHGGGSSSSSCTTHHHHSCCC----SSCCCCCCCCTTCTTGGGGGTEEEEEEEEECTTSCEEEEEECSSSEEEE
T ss_pred CCCHHHHHHHHHhHhccccHHHHHhhh----cccchhhcCCCCchhHHHhhcCcEEEEEEccCCCceEEEEEcCCceEEE
Confidence 999999999999999999999998887 33567899999999999999999996 111
Q ss_pred -C---CcCCCCceEEEEEecCCCcccccchHHHHHHHHhhCCCcccceeecccccccccccccCCC------------CC
Q 004236 220 -P---EKLLKRGTQITLYLKEDDKYEFSEPTRIQGLVKNYSQFVSFPIYTWQEKSRTIEVEEEEKP------------EE 283 (766)
Q Consensus 220 -~---~~~~~~GT~I~L~Lk~~~~~e~~~~~~i~~li~~ys~fi~~pI~~~~~~~~~~~~~~~e~~------------~~ 283 (766)
+ +...++||+|+|||+++.. +|++.++|+++|++||+||+|||+++.+++.++++++++++ ++
T Consensus 159 ~~~~~~~~~~~GT~I~L~Lk~d~~-e~l~~~~i~~lvkkys~fi~~PI~l~~~k~~~~~~~~~e~~~~~~~~~~e~~~~~ 237 (677)
T 2cg9_A 159 TLDEVNERIGRGTILRLFLKDDQL-EYLEEKRIKEVIKRHSEFVAYPIQLVVTKEVEKEVPIPEEEKKDEEKKDEEKKDE 237 (677)
T ss_dssp EECCSSCCCSSEEEEEEEECTTGG-GGGCHHHHHHHHHHHSTTCSSCEEECCCCCCCCC---------------------
T ss_pred eecCCCCCCCCCeEEEEEEcchhh-ccccHHHHHHHHHHHHhhCCCCeEEeeccccccCcCcchhhhccccccccccccc
Confidence 1 2456899999999999998 99999999999999999999999998766654554322110 00
Q ss_pred ---CCCCcc-c---cccccccccccccccceecccCCCCcccCCCCCCHHHHHHHHHHHhcCCCCCceeeeeccccceee
Q 004236 284 ---GEEQPE-G---EKKTKKTTKTEKYWDWELANETKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYTHFTTEGEVEF 356 (766)
Q Consensus 284 ---~~~~~~-~---~~~~~~k~~~~~~~~~e~iN~~~piW~r~~~evt~eeY~~FYk~~~~~~~dpL~~~h~~~eg~~~f 356 (766)
+..+++ + ++++++|++++.+++|++||+++|||+|+|++||+|||.+|||+++|+|++||+|+||++||+++|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~e~e~iN~~~plW~r~~~eit~eeY~~FYk~l~~d~~~pl~~~H~~veg~~~~ 317 (677)
T 2cg9_A 238 DDKKPKLEEVDEEEEKKPKTKKVKEEVQEIEELNKTKPLWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQLEF 317 (677)
T ss_dssp ------------------------CCCCCBCCCCCCCCTTSSCGGGCCTTTHHHHHHHHTTCCSCCSEEEEEEECSSSCE
T ss_pred cccccccccccchhhhcccccccccccccceecccCCCCcccCcccCCHHHHHHHHHHhcCCCCCchheEEecccccceE
Confidence 000111 1 133556777788899999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeeCCCCCCccccccccccCeEEEeeeEEeccCCCCCCcccccccceeeecCCCCCCccchHhhhccHHHHHHHHH
Q 004236 357 RSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKR 436 (766)
Q Consensus 357 ~~llyiP~~~p~~~~~~~~~~~~~ikLYvrrVfIsd~~~~dLlP~wl~FvkGVVDS~DLpLNvSRE~LQ~~~~lk~Irk~ 436 (766)
+||||||+++||++|+ +.+.+++|+||||||||||+|+ +|||+||+||||||||+|||||||||+||+|++|++||++
T Consensus 318 ~~lLyiP~~ap~d~~~-~~~~~~~ikLYv~rVfI~d~~~-~llP~yL~FvkGVVDS~DLpLNvSRE~LQ~~~~lk~I~~~ 395 (677)
T 2cg9_A 318 RAILFIPKRAPFDLFE-SKKKKNNIKLYVRRVFITDEAE-DLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKN 395 (677)
T ss_dssp EEEEEECSSCCC----------CCSEEEETTEEEEECST-TTSCGGGTTCEEEEEESSCCCCBTTTBCCCHHHHHHHHHH
T ss_pred EEEEEEcCCCchhhhh-hhhccCCeEEEEeeeEeecChh-hhchHHHHHheeecccCCCCcccCHHHhccCHHHHHHHHH
Confidence 9999999999999986 3446799999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccCHHHHHHHHHHHhHHhheecccCcccHHhhcCccceeeccCCCcccCHHHHHHhcccCCCeEEE
Q 004236 437 LVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGNHKRLAPLLRFYTSKSEEELISLDEYVENMGEKQNAIYY 516 (766)
Q Consensus 437 l~~kvl~~L~~la~~~d~e~Y~kF~~~f~~~lK~G~~eD~~nr~~l~~LLrF~Ts~~~~~~~SL~eYv~rmke~Qk~IYY 516 (766)
|++||+++|.+|| +|+++|++||++||++||+|+++|..||++|++||||+||+++++++||+||++|||++|+.|||
T Consensus 396 l~kkvl~~l~~la--~~~e~y~~f~~~fg~~lK~G~~eD~~nr~~l~~llrf~ss~~~~~~~sL~eYv~rmke~Q~~IyY 473 (677)
T 2cg9_A 396 IVKKLIEAFNEIA--EDSEQFEKFYSAFSKNIKLGVHEDTQNRAALAKLLRYNSTKSVDELTSLTDYVTRMPEHQKNIYY 473 (677)
T ss_dssp HHHHHHHHHHHHH--SCSHHHHHHHHHHHHHHHHHHHHCSSSHHHHHTTCCBEESSCTTSCBCSTTHHHHSCTTCCEEEE
T ss_pred HHHHHHHHHHHHH--hCHHHHHHHHHHHhHHhhhhhccCHHHHHHHHhheEeeecCCCCceeeHHHHHHhccccCceEEE
Confidence 9999999999999 57899999999999999999999999999999999999999877899999999999999999999
Q ss_pred EecCCHHHHhcCcchHHHhhcCceEEecCCcchHHHHHHHhhccCcceeeccccccCCCCchhHhH--HhhHHHHHHHHH
Q 004236 517 LATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTFNEKKFVDISKEDLELGDEDEVKE--RETKQEFNLLCD 594 (766)
Q Consensus 517 i~~~s~~~~~~SP~lE~~~~kG~EVL~l~dpiDE~~lq~L~ey~gk~f~~V~ke~l~l~~~eee~~--e~~~~~f~~L~~ 594 (766)
++|+|++++++|||+|.|+++|||||||++||||+||++|.+|+|++|++|+++ ++|++.+++++ ++.+++|++||+
T Consensus 474 ~t~~s~~~~~~sp~~E~~~~kg~EVl~l~~~iDe~~~~~l~e~~gk~~~~v~k~-l~l~~~e~~~~~~~~~~~~~~~L~~ 552 (677)
T 2cg9_A 474 ITGESLKAVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQLKEFEGKTLVDITKD-FELEETDEEKAEREKEIKEYEPLTK 552 (677)
T ss_dssp EECSCSTTTTTCGGGHHHHTTTCCEEEECSHHHHHHHGGGSCBTTBEEECSCCC-CCSCSSTTSSTTHHHHHGGGHHHHH
T ss_pred EeCCCHHHHHhCcHHHHHHhCCceEEEeCCchHHHHHHHHHHhCCceEEEeecc-cccccchhhhhhhhhhHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999 99876544333 456778999999
Q ss_pred HHHHHhCCceeEEEEeecCCCCCEEEEeCCCCccHHHHHHHHHHhcCCCCccccccCceeEEECCCChHHHHHHHhhhcC
Q 004236 595 WIKQQLGDKVAKVQVSKRLSSSPCVLVSGKFGWSANMERLMKAQALGDTSSLEFMRGRRILEINPDHPIVKDLNAACKNA 674 (766)
Q Consensus 595 ~lK~~L~~kV~~V~vS~RL~~sP~~lv~se~g~s~~Merimkaq~~~d~~~~~~~~~kk~LEINp~HPLIk~L~~~~~~~ 674 (766)
|||++|+++|.+|++|+||++||||||++++|||++|+|||++|+++++++.++|.++++|||||+||||++|..+...+
T Consensus 553 ~~k~~L~~~v~~V~~s~rl~~sP~~lv~~~~~~s~~merimka~~~~d~~~~~~~~~k~~LeiNp~hpli~~L~~~~~~d 632 (677)
T 2cg9_A 553 ALKEILGDQVEKVVVSYKLLDAPAAIRTGQFGWSANMERIMKAQALRDSSMSSYMSSKKTFEISPKSPIIKELKKRVDEG 632 (677)
T ss_dssp HHHHTTCSSCSCEECCSSCSSSCEEEECCTTSCCHHHHHHHTTCC-------------CEEEECTTCHHHHHHHHHHHTC
T ss_pred HHHHhcCCcceEEEEeccCCCCCEEEEeCcccccHHHHHHHHHhhccccccccccccCceEEEcCCCHHHHHHHHhhhcc
Confidence 99999999999999999999999999999999999999999999877776667788999999999999999999876654
Q ss_pred -CCchHHHHHHHHHhHHHHHhCCCCCCCHHHHHHHHHHHHHHHhC
Q 004236 675 -PDSTDAKRAVDLLYDTALISSGFTPDSPADLGNKIYEMMAMALG 718 (766)
Q Consensus 675 -~~~~~~~~lv~lLyd~AlL~sG~~ledp~~f~~ri~~Ll~~~L~ 718 (766)
++++.++++|++||+||||++|++++||+.|++|+++||.++||
T Consensus 633 ~~~~~~~~~~~~~Lyd~All~~G~~l~dp~~f~~ri~~ll~~~l~ 677 (677)
T 2cg9_A 633 GAQDKTVKDLTKLLYETALLTSGFSLDEPTSFASRINRLISLGLN 677 (677)
T ss_dssp CSSCSSSSTTHHHHHHHHHHHTTCCCSSTTHHHHHHHHTSSSSCC
T ss_pred ccCHHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHhcC
Confidence 45667999999999999999999999999999999999987664
|
| >2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A | Back alignment and structure |
|---|
| >2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A | Back alignment and structure |
|---|
| >1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A | Back alignment and structure |
|---|
| >3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A | Back alignment and structure |
|---|
| >3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major} | Back alignment and structure |
|---|
| >2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1hk7_A Heat shock protein HSP82; ATPase, chaperone; 2.5A {Saccharomyces cerevisiae} SCOP: d.14.1.8 | Back alignment and structure |
|---|
| >2gq0_A Chaperone protein HTPG; molecular chaperone, HSP90, E. coli, hydrolase; 1.90A {Escherichia coli} | Back alignment and structure |
|---|
| >3pry_A Heat shock protein HSP 90-beta; structural genomics, structural genomics consortium, SGC, HE protein, chaperone; 2.28A {Homo sapiens} SCOP: d.14.1.8 | Back alignment and structure |
|---|
| >1usu_A Heat shock protein HSP82; chaperone/complex, chaperone, activator, HSP90; 2.15A {Saccharomyces cerevisiae} SCOP: d.14.1.8 PDB: 1usv_A | Back alignment and structure |
|---|
| >1y6z_A Heat shock protein, putative; chaperone, structural genomics, structural genom consortium, SGC, unknown function; 1.88A {Plasmodium falciparum} | Back alignment and structure |
|---|
| >3peh_A Endoplasmin homolog; structural genomics, structural genomics consortium, SGC, HE protein, chaperone, ATP binding; HET: IBD; 2.75A {Plasmodium falciparum 3D7} PDB: 3pej_A* | Back alignment and structure |
|---|
| >3ied_A Heat shock protein; HSP90, chaperone, structural genomics, structura genomics consortium, SGC, stress response; HET: AN2; 2.01A {Plasmodium falciparum} | Back alignment and structure |
|---|
| >1qy5_A Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: NEC; 1.75A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1qy8_A* 1qye_A* 1u0y_A* 1yt2_A* | Back alignment and structure |
|---|
| >3nmq_A Heat shock protein HSP 90-beta; ATPase, chaperone-chaperone inhibitor complex; HET: 7PP; 2.20A {Homo sapiens} SCOP: d.122.1.1 | Back alignment and structure |
|---|
| >3o0i_A HSP90AA1 protein; HSP90 heat-shock proteins, chaperone-inhibitor complex; HET: P54; 1.47A {Homo sapiens} PDB: 2fwz_A* 2fwy_A* 2h55_A* | Back alignment and structure |
|---|
| >3t0h_A Heat shock protein HSP 90-alpha; chaperone, ATPase; 1.20A {Homo sapiens} SCOP: d.122.1.1 PDB: 3r4m_A 3t0z_A* 3t10_A* 3t1k_A* 3t2s_A* 1uyl_A 1uy7_A* 1uy8_A* 1uy9_A* 1uyc_A* 1uyd_A* 1uye_A* 1uyf_A* 1uyg_A* 1uyh_A* 1uyk_A* 1uy6_A 2cdd_A* 2uwd_A* 2vci_A* ... | Back alignment and structure |
|---|
| >2gqp_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, ligand, NECA, NPCA, adenosine; HET: PA7 PG4 1PE; 1.50A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1tc0_A* 1tbw_A* 1u0z_A* 1u2o_A* 1ysz_A* 1yt0_A* 1yt1_A* 2exl_A* 2fyp_A* 2gfd_A* 1tc6_A* 2h8m_A* 2hch_A* 2hg1_A* 3o2f_A* 2esa_A* | Back alignment and structure |
|---|
| >1yc1_A HSP 86, heat shock protein HSP 90-alpha; cell-cycle, cancer, drug design, cell cycle; HET: 4BC; 1.70A {Homo sapiens} SCOP: d.122.1.1 PDB: 1yc3_A* 1yc4_A* | Back alignment and structure |
|---|
| >2wer_A ATP-dependent molecular chaperone HSP82; ATPase, ATP-binding, phosphoprotein, stress respo nucleotide-binding; HET: RDC; 1.60A {Saccharomyces cerevisiae} PDB: 2weq_A* 2wep_A* 1zwh_A* 1zw9_A* 2fxs_A* 3c11_A* 3c0e_A* 2yge_A* 2ygf_A* 2akp_A | Back alignment and structure |
|---|
| >2ior_A Chaperone protein HTPG; heat shock protein, HSP90; HET: ADP; 1.65A {Escherichia coli} | Back alignment and structure |
|---|
| >1sf8_A Chaperone protein HTPG; four helix bundle dimerization interface, exposed amphipathic helix, three stranded beta sheet; 2.60A {Escherichia coli} SCOP: d.271.1.1 | Back alignment and structure |
|---|
| >1b63_A MUTL; DNA mismatch repair, ATPase; HET: ANP; 1.90A {Escherichia coli K12} SCOP: d.14.1.3 d.122.1.2 PDB: 1nhh_A* 1nhi_A* 1bkn_A 1nhj_A* 1b62_A* | Back alignment and structure |
|---|
| >1h7s_A PMS1 protein homolog 2; DNA repair, GHL ATPase, mismatch repair, HNPCC; 1.95A {Homo sapiens} SCOP: d.14.1.3 d.122.1.2 PDB: 1h7u_A* 1ea6_A* | Back alignment and structure |
|---|
| >3h4l_A DNA mismatch repair protein PMS1; ATP binding, DNA repair, DNA damage, nucleus, phosphop DNA binding protein, protein binding; HET: DNA ANP; 2.50A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3na3_A DNA mismatch repair protein MLH1; MUTL protein homolog 1, DNA damag repair, structural genomics consortium, SGC, protein bindin; HET: DNA ATP; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
| >3fv5_A DNA topoisomerase 4 subunit B; topoisomerase IV B subunit complex, antibiotic resistance, ATP-binding, nucleotide-binding; HET: DNA 1EU; 1.80A {Escherichia coli} PDB: 1s14_A* | Back alignment and structure |
|---|
| >1mu5_A Type II DNA topoisomerase VI subunit B; GHKL ATPase, helix two-turns helix; 2.00A {Sulfolobus shibatae} SCOP: a.156.1.3 d.14.1.3 d.122.1.2 PDB: 1mx0_A* 1z5b_A* 1z5a_A* 1z59_A* 1z5c_A* 2hkj_A* | Back alignment and structure |
|---|
| >2zbk_B Type 2 DNA topoisomerase 6 subunit B; DNA binding protein, decatenation, ATPase, drug design, DNA-binding, magnesium, metal-binding; HET: RDC; 3.56A {Sulfolobus shibatae} | Back alignment and structure |
|---|
| >1kij_A DNA gyrase subunit B; topoisomerase, gyrase B-coumarin complex, isomerase; HET: DNA NOV; 2.30A {Thermus thermophilus} SCOP: d.14.1.3 d.122.1.2 | Back alignment and structure |
|---|
| >1s16_A Topoisomerase IV subunit B; two-domain protein complexed with ADPNP; HET: ANP; 2.10A {Escherichia coli} SCOP: d.14.1.3 d.122.1.2 | Back alignment and structure |
|---|
| >2q2e_B Type 2 DNA topoisomerase 6 subunit B; DNA-binding, SPO11, ATPase; 4.00A {Methanosarcina mazei} | Back alignment and structure |
|---|
| >4duh_A DNA gyrase subunit B; structure-based drug design, antibacterial, DNA gyrase B, GY isomerase-isomerase inhibitor complex; HET: DNA RLI; 1.50A {Escherichia coli} PDB: 1aj6_A* 1kzn_A* 3g7e_A* | Back alignment and structure |
|---|
| >1ei1_A DNA gyrase B, GYRB; ATPase domain, dimer, isomerase; HET: DNA ANP; 2.30A {Escherichia coli} SCOP: d.14.1.3 d.122.1.2 | Back alignment and structure |
|---|
| >4emv_A DNA topoisomerase IV, B subunit; protein-inhibitor complex, ATP binding, structure-based drug antimicrobial, virtual screen; HET: DNA 0R9; 1.70A {Streptococcus pneumoniae GA47373} PDB: 4em7_A* | Back alignment and structure |
|---|
| >3jz3_A Sensor protein QSEC; helix-turn-helix, kinase domain, ATP-binding, cell inner MEM cell membrane, kinase, membrane, nucleotide-binding; 2.50A {Escherichia coli} | Back alignment and structure |
|---|
| >1zxm_A TOPO IIA ATPase, DNA topoisomerase II, alpha isozyme; GHKL nucleotide-binding fold; HET: DNA ANP; 1.87A {Homo sapiens} PDB: 1zxn_A* | Back alignment and structure |
|---|
| >3cwv_A DNA gyrase, B subunit, truncated; structural genomics, unknown function, B-subunit binding, isomerase, nucleotide-binding, topoisomerase; HET: DNA; 1.95A {Myxococcus xanthus} | Back alignment and structure |
|---|
| >3lnu_A Topoisomerase IV subunit B; PARE, ATP-binding, nucleotide-BI topoisomerase; 2.20A {Xanthomonas oryzae PV} PDB: 3lps_A* | Back alignment and structure |
|---|
| >1id0_A PHOQ histidine kinase; PHOQ/PHOP, signal transduction, transferase; HET: ANP; 1.60A {Escherichia coli} SCOP: d.122.1.3 PDB: 3cgz_A 3cgy_A | Back alignment and structure |
|---|
| >4ew8_A Sensor protein DIVL; signal transduction, two-component regulatory system, hiska GHKL domain, structural genomics; 2.50A {Caulobacter crescentus} | Back alignment and structure |
|---|
| >2btz_A Pyruvate dehydrogenase kinase isoenzyme 2; GHKL motif regulation, transferase; 2.2A {Homo sapiens} PDB: 2bu2_A* 2bu5_A* 2bu6_A* 2bu7_A* 2bu8_A* 3crk_A* 1jm6_A* 3crl_A* | Back alignment and structure |
|---|
| >1th8_A Anti-sigma F factor; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: d.122.1.3 PDB: 1thn_A* 1til_A* 1l0o_A* 1tid_A* | Back alignment and structure |
|---|
| >1ysr_A Sensor-type histidine kinase PRRB; ATP-binding domain, structural genomics, mycobacterium tuberculosis structural proteomics project; 1.78A {Mycobacterium tuberculosis} SCOP: d.122.1.3 PDB: 1ys3_A | Back alignment and structure |
|---|
| >3d36_A Sporulation kinase B; GHKL ATPase, four helix bundle, class I two-component histidine kinase, phosphoprotein; HET: ADP; 2.03A {Geobacillus stearothermophilus} | Back alignment and structure |
|---|
| >3sl2_A Sensor histidine kinase YYCG; ATP binding, intact ATP, bergerat fold, TR; HET: ATP; 1.61A {Bacillus subtilis} | Back alignment and structure |
|---|
| >3a0y_A Sensor protein; ATP-LID, kinase, phosphoprotein, transferase, two-component regulatory system; 1.57A {Thermotoga maritima} PDB: 3a0t_A* 3a0x_A 3a0w_A 3a0z_A | Back alignment and structure |
|---|
| >2q8g_A [pyruvate dehydrogenase [lipoamide]] kinase isozy; GHKL ATPase/kinase family, pyruvate dehydrogenase complex, mitochondrial kinase; HET: AZX; 1.90A {Homo sapiens} PDB: 2q8f_A* 2q8h_A | Back alignment and structure |
|---|
| >2e0a_A Pyruvate dehydrogenase kinase isozyme 4; PDK4, ATP-binding, structural genomics, NPPSFA, NATI project on protein structural and functional analyses; HET: ANP; 1.86A {Homo sapiens} PDB: 2zdx_A* 2zdy_A* 2zkj_A* 3d2r_A* | Back alignment and structure |
|---|
| >1i58_A Chemotaxis protein CHEA; beta-alpha sandwich, signaling protein, transferase; HET: ACP ADP; 1.60A {Thermotoga maritima} SCOP: d.122.1.3 PDB: 1i59_A* 1i5a_A* 1i5b_A* 1i5c_A* 1i5d_A* | Back alignment and structure |
|---|
| >1gkz_A [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase; transferase, mitochondrial protein kinase, potassium; HET: ADP; 2.2A {Rattus norvegicus} SCOP: a.29.5.1 d.122.1.4 PDB: 1gjv_A 1gkx_A* | Back alignment and structure |
|---|
| >1y8o_A [pyruvate dehydrogenase [lipoamide]] kinase isozy; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED ADP; 2.48A {Homo sapiens} SCOP: a.29.5.1 d.122.1.4 PDB: 1y8n_A* 1y8p_A* 2pnr_A* 2q8i_A* | Back alignment and structure |
|---|
| >1bxd_A ENVZ(290-450), protein (osmolarity sensor protein (ENVZ)); histidine kinase, osmosensor, His-Asp phosphorelay system, signal transduction; HET: ANP; NMR {Escherichia coli BL21} SCOP: d.122.1.3 | Back alignment and structure |
|---|
| >2c2a_A Sensor histidine kinase; phosphotransfer, PHOQ, selenomethionyl MAD, two-component systems, transferase; HET: ADP; 1.9A {Thermotoga maritima} SCOP: a.30.2.1 d.122.1.3 PDB: 3dge_A* | Back alignment and structure |
|---|
| >3ehh_A Sensor kinase (YOCF protein); four-helix bundle, GHL ATPase domain, transferase; HET: MSE ADP; 2.10A {Bacillus subtilis} PDB: 3ehj_A* 3gie_A* 3gif_A* 3gig_A* 3ehf_A* | Back alignment and structure |
|---|
| >3ehg_A Sensor kinase (YOCF protein); GHL ATPase domain, transferase; HET: ATP; 1.74A {Bacillus subtilis} | Back alignment and structure |
|---|
| >3a0r_A Sensor protein; four helix bundle, PAS fold, kinase, phosphoprotein, transfe two-component regulatory system; 3.80A {Thermotoga maritima} | Back alignment and structure |
|---|
| >1r62_A Nitrogen regulation protein NR(II); PII, histidine kinase, two component system, transfera; 1.60A {Escherichia coli} SCOP: d.122.1.3 | Back alignment and structure |
|---|
| >3zxo_A Redox sensor histidine kinase response regulator; transferase; HET: MSE; 1.90A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >1pvg_A DNA topoisomerase II; GHKL ATPase domain; HET: DNA ANP; 1.80A {Saccharomyces cerevisiae} SCOP: d.14.1.3 d.122.1.2 PDB: 1qzr_A* | Back alignment and structure |
|---|
| >1b3q_A Protein (chemotaxis protein CHEA); histine kinase, signal transduction, multi-domai protein, transferase; 2.60A {Thermotoga maritima} SCOP: a.30.2.1 b.40.7.1 d.122.1.3 PDB: 2ch4_A* 3ur1_A | Back alignment and structure |
|---|
| >4gfh_A DNA topoisomerase 2; topoisomerase, protein-DNA complex, DNA supercoiling, DNA replication; HET: DNA PTR TSP ANP; 4.41A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3ttz_A DNA gyrase subunit B; protein-inhibitor complex, ATP-binding, structure-based drug antimicrobial, isomerase-isomerase inhibitor complex; HET: DNA 07N; 1.63A {Staphylococcus aureus} PDB: 3u2d_A* 3u2k_A* 3g75_A* 3g7b_A* | Back alignment and structure |
|---|
| >3zxq_A Hypoxia sensor histidine kinase response regulato; transferase; 1.90A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >4fpp_A Phosphotransferase; four helix bundle, bergerat fold, CCKA, CTRA, CPDR, bacterial cytoplasme; 2.20A {Caulobacter crescentus} PDB: 4fmt_A | Back alignment and structure |
|---|
| >3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 766 | ||||
| d1usua_ | 256 | d.14.1.8 (A:) Heat shock protein hsp82 {Baker's ye | 3e-87 | |
| d2gqpa1 | 227 | d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) | 3e-58 | |
| d1uyla_ | 208 | d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: | 6e-56 | |
| d2iwxa1 | 213 | d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharo | 2e-54 | |
| d1sf8a_ | 115 | d.271.1.1 (A:) Chaperone protein HtpG {Escherichia | 1e-32 |
| >d1usua_ d.14.1.8 (A:) Heat shock protein hsp82 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ribosomal protein S5 domain 2-like superfamily: Ribosomal protein S5 domain 2-like family: Hsp90 middle domain domain: Heat shock protein hsp82 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 273 bits (700), Expect = 3e-87
Identities = 122/259 (47%), Positives = 181/259 (69%), Gaps = 4/259 (1%)
Query: 312 TKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYTHFTTEGEVEFRSVLYIPGMGPLNNE 371
TKP+W RNP +I ++EY+ FYK N++ DPL HF+ EG++EFR++L+IP P +
Sbjct: 2 TKPLWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQLEFRAILFIPKRAPFDLF 61
Query: 372 EIMNPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVR 431
E K NI+LYV+RVFI+D+ + +L P +LSFVKGVVDS+DLPLN+SRE+LQ+++I++
Sbjct: 62 E-SKKKKNNIKLYVRRVFITDEAE-DLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMK 119
Query: 432 IMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLGCVEDSGNHKRLAPLLRFYTS 491
++RK +V+K + +I++ E ++KF+ F + +KLG ED+ N LA LLR+ ++
Sbjct: 120 VIRKNIVKKLIEAFNEIAEDS--EQFEKFYSAFSKNIKLGVHEDTQNRAALAKLLRYNST 177
Query: 492 KSEEELISLDEYVENMGEKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEV 551
KS +EL SL +YV M E Q IYY+ +SLKS + +PFL+ L K+ EVL+L +PIDE
Sbjct: 178 KSVDELTSLTDYVTRMPEHQKNIYYITGESLKSVEKSPFLDALKAKNFEVLFLTDPIDEY 237
Query: 552 AIQNLQTFNEKKFVDISKE 570
A L+ F K VDI+K+
Sbjct: 238 AFTQLKEFEGKTLVDITKD 256
|
| >d2gqpa1 d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) [TaxId: 9615]} Length = 227 | Back information, alignment and structure |
|---|
| >d1uyla_ d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: 9606]} Length = 208 | Back information, alignment and structure |
|---|
| >d2iwxa1 d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 213 | Back information, alignment and structure |
|---|
| >d1sf8a_ d.271.1.1 (A:) Chaperone protein HtpG {Escherichia coli [TaxId: 562]} Length = 115 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 766 | |||
| d1usua_ | 256 | Heat shock protein hsp82 {Baker's yeast (Saccharom | 100.0 | |
| d2gqpa1 | 227 | HSP90 {Dog (Canis familiaris) [TaxId: 9615]} | 100.0 | |
| d1uyla_ | 208 | HSP90 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2iwxa1 | 213 | HSP90 {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1sf8a_ | 115 | Chaperone protein HtpG {Escherichia coli [TaxId: 5 | 99.97 | |
| d2hkja3 | 219 | Topoisomerase VI-B subunit {Archaeon Sulfolobus sh | 98.9 | |
| d1h7sa2 | 203 | DNA mismatch repair protein PMS2 {Human (Homo sapi | 98.57 | |
| d1b63a2 | 218 | DNA mismatch repair protein MutL {Escherichia coli | 98.07 | |
| d1jm6a2 | 190 | Pyruvate dehydrogenase kinase {Rat (Rattus norvegi | 97.67 | |
| d1gkza2 | 193 | Branched-chain alpha-ketoacid dehydrogenase kinase | 97.61 | |
| d1y8oa2 | 125 | Pyruvate dehydrogenase kinase {Human (Homo sapiens | 97.34 | |
| d2c2aa2 | 161 | Sensor histidine kinase TM0853 {Thermotoga maritim | 97.33 | |
| d1id0a_ | 146 | Histidine kinase PhoQ domain {Escherichia coli [Ta | 97.28 | |
| d1bxda_ | 161 | Histidine kinase domain of the osmosensor EnvZ {Es | 97.25 | |
| d1ysra1 | 148 | Sensor-type histidine kinase PrrB {Mycobacterium t | 97.22 | |
| d1pvga2 | 239 | DNA topoisomerase II {Baker's yeast (Saccharomyces | 97.18 | |
| d1kija2 | 212 | DNA gyrase B {Thermus thermophilus [TaxId: 274]} | 96.55 | |
| d1th8a_ | 139 | Anti-sigma factor spoIIab {Bacillus stearothermoph | 96.34 | |
| d1ei1a2 | 219 | DNA gyrase B {Escherichia coli [TaxId: 562]} | 96.14 | |
| d1ixma_ | 179 | Sporulation response regulatory protein Spo0B {Bac | 94.5 | |
| d1r62a_ | 156 | Nitrogen regulation protein NtrB, C-terminal domai | 94.21 | |
| d1s14a_ | 168 | Topoisomerase IV subunit B {Escherichia coli [TaxI | 86.48 |
| >d1usua_ d.14.1.8 (A:) Heat shock protein hsp82 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ribosomal protein S5 domain 2-like superfamily: Ribosomal protein S5 domain 2-like family: Hsp90 middle domain domain: Heat shock protein hsp82 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.9e-85 Score=679.06 Aligned_cols=255 Identities=48% Similarity=0.890 Sum_probs=239.6
Q ss_pred CCCCcccCCCCCCHHHHHHHHHHHhcCCCCCceeeeeccccceeeEEEEEeeCCCCCCccccccccccCeEEEeeeEEec
Q 004236 312 TKPIWMRNPKEIEKDEYHEFYKKTFNEFLDPLAYTHFTTEGEVEFRSVLYIPGMGPLNNEEIMNPKTKNIRLYVKRVFIS 391 (766)
Q Consensus 312 ~~piW~r~~~evt~eeY~~FYk~~~~~~~dpL~~~h~~~eg~~~f~~llyiP~~~p~~~~~~~~~~~~~ikLYvrrVfIs 391 (766)
++|||+|+|++||+|||++|||+++++|++||+|+||++||+++|+||||||+++|+++|+ +...+++|+||||||||+
T Consensus 2 tkpiW~r~~~eit~eeY~~FYk~l~~~~~~Pl~~iH~~~eg~~~~~~lLyiP~~~p~~~~~-~~~~~~~ikLY~~rVfI~ 80 (256)
T d1usua_ 2 TKPLWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQLEFRAILFIPKRAPFDLFE-SKKKKNNIKLYVRRVFIT 80 (256)
T ss_dssp CCCGGGSCGGGCCHHHHHHHHHHHHCCSSCCSEEEEEEECSSSCEEEEEEECSSCCTTTTC-C----CCEEEEETTEEEE
T ss_pred CCCCccCCchhCCHHHHHHHHHhhcCCccCCceeEEeeeeeeEEEEEEEEecccCcchhhh-hhhhcCCeEEEEEeeeec
Confidence 5799999999999999999999999999999999999999999999999999999999886 445678999999999999
Q ss_pred cCCCCCCcccccccceeeecCCCCCCccchHhhhccHHHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHhHHhhee
Q 004236 392 DDFDGELFPRYLSFVKGVVDSDDLPLNVSREILQESRIVRIMRKRLVRKTFDMIQDISQSENKEDYKKFWENFGRFLKLG 471 (766)
Q Consensus 392 d~~~~dLlP~wl~FvkGVVDS~DLpLNvSRE~LQ~~~~lk~Irk~l~~kvl~~L~~la~~~d~e~Y~kF~~~f~~~lK~G 471 (766)
|+|+ +|||+||+||||||||+|||||||||+||+|++|++|++.|++||+++|++++ +|+++|.+||++||.+||+|
T Consensus 81 d~~~-~llP~~L~FvkGVVDS~DlpLNVSRE~LQ~~~~l~kI~~~i~kkv~~~L~~~~--~d~eky~~fw~~fg~~lK~G 157 (256)
T d1usua_ 81 DEAE-DLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKNIVKKLIEAFNEIA--EDSEQFEKFYSAFSKNIKLG 157 (256)
T ss_dssp SCCT-TSSCGGGTTCEEEEEESSCCSCC------CCHHHHHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHH
T ss_pred cchh-hHHHHHHHHhhhccccccCCcccchhhhcccHHHHHHHHHHHHHHHHHHHHhh--hCHHHHHHHHHHHhHHHhhh
Confidence 9999 99999999999999999999999999999999999999999999999999887 68999999999999999999
Q ss_pred cccCcccHHhhcCccceeeccCCCcccCHHHHHHhcccCCCeEEEEecCCHHHHhcCcchHHHhhcCceEEecCCcchHH
Q 004236 472 CVEDSGNHKRLAPLLRFYTSKSEEELISLDEYVENMGEKQNAIYYLATDSLKSAKSAPFLEKLVQKDIEVLYLIEPIDEV 551 (766)
Q Consensus 472 ~~eD~~nr~~l~~LLrF~Ts~~~~~~~SL~eYv~rmke~Qk~IYYi~~~s~~~~~~SP~lE~~~~kG~EVL~l~dpiDE~ 551 (766)
|++|.+|++++++||||+||.++++++||+||++||+++|+.|||++|+|++.+++|||+|+|+++|||||||+|||||+
T Consensus 158 ~~~D~~~~e~l~~ll~f~ss~s~~e~~SL~eYvermke~Qk~IyYi~~~s~~~~~~sP~lE~~k~kg~EVL~l~dpiDe~ 237 (256)
T d1usua_ 158 VHEDTQNRAALAKLLRYNSTKSVDELTSLTDYVTRMPEHQKNIYYITGESLKSVEKSPFLDALKAKNFEVLFLTDPIDEY 237 (256)
T ss_dssp HHHCTTTHHHHHTTCEEEETTEEEEEEEHHHHHHTSCTTCCEEEEEECSSHHHHHTCTTHHHHHHTTCCEEEECSHHHHH
T ss_pred ccccHHHHHHHHHhhhhhccCCCcceeeHHHHHhhccccccceEEEecCCHHHHHcCHHHHHHHHCCCEEEEecCchHHH
Confidence 99999999999999999999877899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccCcceeecccc
Q 004236 552 AIQNLQTFNEKKFVDISKE 570 (766)
Q Consensus 552 ~lq~L~ey~gk~f~~V~ke 570 (766)
||++|.+|+|++|++|+++
T Consensus 238 ~i~~l~e~~~kkf~sV~ke 256 (256)
T d1usua_ 238 AFTQLKEFEGKTLVDITKD 256 (256)
T ss_dssp HHHHHCEETTEEEEETTCC
T ss_pred HHHHHHHhCCCceeecCCC
Confidence 9999999999999999875
|
| >d2gqpa1 d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
| >d1uyla_ d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2iwxa1 d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1sf8a_ d.271.1.1 (A:) Chaperone protein HtpG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2hkja3 d.122.1.2 (A:10-228) Topoisomerase VI-B subunit {Archaeon Sulfolobus shibatae [TaxId: 2286]} | Back information, alignment and structure |
|---|
| >d1h7sa2 d.122.1.2 (A:29-231) DNA mismatch repair protein PMS2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1jm6a2 d.122.1.4 (A:1177-1366) Pyruvate dehydrogenase kinase {Rat (Rattus norvegicus), isozyme 2 [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1gkza2 d.122.1.4 (A:186-378) Branched-chain alpha-ketoacid dehydrogenase kinase (BCK) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1y8oa2 d.122.1.4 (A:177-301) Pyruvate dehydrogenase kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2c2aa2 d.122.1.3 (A:321-481) Sensor histidine kinase TM0853 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1id0a_ d.122.1.3 (A:) Histidine kinase PhoQ domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1bxda_ d.122.1.3 (A:) Histidine kinase domain of the osmosensor EnvZ {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1ysra1 d.122.1.3 (A:299-446) Sensor-type histidine kinase PrrB {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1pvga2 d.122.1.2 (A:7-245) DNA topoisomerase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1kija2 d.122.1.2 (A:9-220) DNA gyrase B {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1th8a_ d.122.1.3 (A:) Anti-sigma factor spoIIab {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1ei1a2 d.122.1.2 (A:2-220) DNA gyrase B {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1ixma_ d.123.1.1 (A:) Sporulation response regulatory protein Spo0B {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1r62a_ d.122.1.3 (A:) Nitrogen regulation protein NtrB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1s14a_ d.122.1.2 (A:) Topoisomerase IV subunit B {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|