Citrus Sinensis ID: 004305

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760--
MANKSASPSSLPKSGAVSRGYNFASTWEQNAPLSEQQQAAIGSLFHVVAERPFPVNLAQEHVPGQDNGLSVATKDHSFGESDAIEAVLVNTNQFYNWFTDLELAMKSETEEKYRHYVNTLMGRIQTCDDILRQVDGTLDLFNELQLQHHAVATKTKTLHDACDRLVIEKQRLIEFAEAVQSKLKYFDELENIAASFYSPNMNVGNGNFFHLLKRLDECILYVEGNPQYAESSVYLLKFRQLQVQAAIRSSGGSKTSVSEGVEASLIYVRFKAAASELKPVLEEIESRSSKKEYVQILEECHKLYCEQRLSLVKGIVQQRISEFSKKETLPSLTRSGCAYLMQVCQLEHQLFDHFFPSSSEDISSLAPLIDPLSTFLYDILRPKLIHETNVDLLCELVDILKVEVLGEQLSRRSESLAGLRPTLERILADVHERLTFRARTHIRDEIANYIPSDEDLNYPSKLEQSAGTKLETTPADENPDVYKTWYPPLEKTVSCLSKLYQCLEQAVFTGLAQEAVEVCSESIQKASKLIAKRSTPMDGQLFLIKYLLILREQIAPFDIEFSVTHKELDFSHLLEHLRRILRGQASLFDWSRSTSLARTLSPRVLESQIDAKKELEKSLKATCEEFIMAVTKLVVDPMLSFVAKVTAVKVALSSGNQNQNVDSLMAKPLKDQAFATPDKVAELVHKVNAAIQQELPPVMAKMKLYLQNPSTRTILFKPVKTNIVEAHIQVQSLLKAEYMPEEQSIINMVSMPDLQAQLDSLL
cccccccccccccccccccccccHHHHHccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHcccccccccccccHHccccHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHccHHHHHHHcccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHccccHHHHHcHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHccccHHHHHHHHHHcc
cccccccccccccccccccccccHHHHHccccccHHHHHHHHHHHHHHHcccccccccHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcHHHHccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHcccHHHHHHHHcccccccccccccHHHccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccEEEEEEcEEEcHHHHHHHHHHHHHcccccccccccHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHcccccHHHHHHHHHHcc
manksaspsslpksgavsrgynfastweqnaplseQQQAAIGSLFHVvaerpfpvnlaqehvpgqdnglsvatkdhsfgesDAIEAVLVNTNQFYNWFTDLELAMKSETEEKYRHYVNTLMGRIQTCDDILRQVDGTLDLFNELQLQHHAVATKTKTLHDACDRLVIEKQRLIEFAEAVQSKLKYFDELENIAasfyspnmnvgngnFFHLLKRLDECIlyvegnpqyaESSVYLLKFRQLQVQAAIRssggsktsvseGVEASLIYVRFKAAASELKPVLEEIESRSSKKEYVQILEECHKLYCEQRLSLVKGIVQQRISefskketlpsltrsGCAYLMQVCQLEHqlfdhffpsssedisslaplidplstflydilrpklihETNVDLLCELVDILKVEVLGEQLSRRSESLAGLRPTLERILADVHERLTFRARTHIRDEianyipsdedlnypskleqsagtklettpadenpdvyktwypplekTVSCLSKLYQCLEQAVFTGLAQEAVEVCSESIQKASKLIAkrstpmdgQLFLIKYLLILREqiapfdiefsvthkeldFSHLLEHLRRILRGQaslfdwsrstslartlsprvLESQIDAKKELEKSLKATCEEFIMAVTKLVVDPMLSFVAKVTAVKVALSsgnqnqnvdslmakplkdqafatPDKVAELVHKVNAAIQQELPPVMAKMKLYlqnpstrtilfkpvktNIVEAHIQVQSLLKaeympeeqSIINMVSMPDLQAQLDSLL
manksaspsslpksgaVSRGYNFASTWEQNAPLSEQQQAAIGSLFHVVAERPFPVNLAQEHVPGQDNGLSVATKDHSFGESDAIEAVLVNTNQFYNWFTDLELAMKSETEEKYRHYVNTLMGRIQTCDDILRQVDGTLDLFNELQLQHHAVATKTKTLHDACDRLVIEKQRLIEFAEAVQSKLKYFDELENIAASFYSPNMNVGNGNFFHLLKRLDECILYVEGNPQYAESSVYLLKFRQLQVQAAIrssggsktsvsegVEASLIYVRFKAAASELKpvleeiesrsskKEYVQILEECHKLYCEQRLSLVKGIVQQRisefskketlpslTRSGCAYLMQVCQLEHQLFDHFFPSSSEDISSLAPLIDPLSTFLYDILRPKLIHETNVDLLCELVDILKVEVLgeqlsrrseslaglrptlERILADVHERLTFRARTHIRDEIanyipsdedlnypSKLEQSAGtklettpadenpdvYKTWYPPLEKTVSCLSKLYQCLEQAVFTGLAQEAVEVCSESIQKASKLiakrstpmdGQLFLIKYLLILREQIAPFDIEFSVTHKELDFSHLLEHLRRILRGQaslfdwsrstslartlsprvlesQIDAKKELEKSLKATCEEFIMAVTKLVVDPMLSFVAKVTAVKVALSSGNQNQNVDSLMAKPLKDQAFATPDKVAELVHKVNAAIQQELPPVMAKMKLYLQNPSTRTILFKPVKTNIVEAHIQVQSLLKAEYMPEEQSIINMVSMPDLQAQLDSLL
MANKSASPSSLPKSGAVSRGYNFASTWEQNAPLSEQQQAAIGSLFHVVAERPFPVNLAQEHVPGQDNGLSVATKDHSFGESDAIEAVLVNTNQFYNWFTDLELAMKSETEEKYRHYVNTLMGRIQTCDDILRQVDGTLDLFNELQLQHHAVATKTKTLHDACDRLVIEKQRLIEFAEAVQSKLKYFDELENIAASFYSPNMNVGNGNFFHLLKRLDECILYVEGNPQYAESSVYLLKFRQLQVQAAIRSSGGSKTSVSEGVEASLIYVRFKAAASELKPVLEEIESRSSKKEYVQILEECHKLYCEQRLSLVKGIVQQRISEFSKKETLPSLTRSGCAYLMQVCQLEHQLFDHFFPSSSEDISSLAPLIDPLSTFLYDILRPKLIHETNVDLLCELVDILKVEVLGEQLSRRSESLAGLRPTLERILADVHERLTFRARTHIRDEIANYIPSDEDLNYPSKLEQSAGTKLETTPADENPDVYKTWYPPLEKTVSCLSKLYQCLEQAVFTGLAQEAVEVCSESIQKASKLIAKRSTPMDGQLFLIKYLLILREQIAPFDIEFSVTHKELDFSHLLEHLRRILRGQASLFDWSRSTSLARTLSPRVLESQIDAKKELEKSLKATCEEFIMAVTKLVVDPMLSFVAKVTAVKVALSSGNQNQNVDSLMAKPLKDQAFATPDKVAELVHKVNAAIQQELPPVMAKMKLYLQNPSTRTILFKPVKTNIVEAHIQVQSLLKAEYMPEEQSIINMVSMPDLQAQLDSLL
**************************************AAIGSLFHVVAERPFPVNLAQ******************FGESDAIEAVLVNTNQFYNWFTDLELAMKSETEEKYRHYVNTLMGRIQTCDDILRQVDGTLDLFNELQLQHHAVATKTKTLHDACDRLVIEKQRLIEFAEAVQSKLKYFDELENIAASFYSPNMNVGNGNFFHLLKRLDECILYVEGNPQYAESSVYLLKFRQLQVQAAI*************VEASLIYVRFKAAASELKPVL**********EYVQILEECHKLYCEQRLSLVKGIVQQRISEFSKKETLPSLTRSGCAYLMQVCQLEHQLFDHFFPSSSEDISSLAPLIDPLSTFLYDILRPKLIHETNVDLLCELVDILKVEVLGEQLSR***SLAGLRPTLERILADVHERLTFRARTHIRDEIANYIP****************************DVYKTWYPPLEKTVSCLSKLYQCLEQAVFTGLAQEAVEVCSESIQKASKLIAKRSTPMDGQLFLIKYLLILREQIAPFDIEFSVTHKELDFSHLLEHLRRILRGQASLFDWSRSTSLART******************SLKATCEEFIMAVTKLVVDPMLSFVAKVTAVKVAL*********************FATPDKVAELVHKVNAAIQQELPPVMAKMKLYLQNPSTRTILFKPVKTNIVEAHIQVQSLLKAEYM***********************
*************************TWEQNAPLSEQQQAAIGSLFHVVAE***************************************NTNQFYNWFTDLELA******EKYRHYVNTLMGRIQTCDDILRQVDGTLDLFNELQLQHHAVATKTKTLHDACDRLVIEKQRLIEFAEAVQSKLKYFDELENIAASFYS****VGNGNFFHLLKRLDECILYVEGNPQYAESSVYLLKFRQLQVQAA****************ASLIYVRFKAAASELKPVLEEIESRSSKKEYVQILEECHKLYCEQRLSLVKGIVQQRISEFSKKETLPSLTRSGCAYLMQVCQLEHQLFDHFFPSSSEDISSLAPLIDPLSTFLYDILRPKLIHETNVDLLCELVDILKVE***************LRPTLERILADVHERLTFRARTHIRDEIANYIPSDEDL***********************DVYKTWYPPLEKTVSCLSKLYQCLEQAVFTGLAQEAVEVCSESIQK***********MDGQLFLIKYLLILREQIAPFDIEFSVTHKELDFSHLLEHLRRILRGQASLFDWSRSTSLARTLSPR*****IDAKKELEKSLKATCEEFIMAVTKLVVDPMLSFVAKVTA*************************AFATPDKVAELVHKVNAAIQQELPPVMAKMKLYLQNPSTRTILFKPVKTNIVEAHIQVQSLLKAEYMPEEQSIINMVSMPDLQAQLDSLL
*****************SRGYNFASTWEQNAPLSEQQQAAIGSLFHVVAERPFPVNLAQEHVPGQDNGLSVATKDHSFGESDAIEAVLVNTNQFYNWFTDLELAMKSETEEKYRHYVNTLMGRIQTCDDILRQVDGTLDLFNELQLQHHAVATKTKTLHDACDRLVIEKQRLIEFAEAVQSKLKYFDELENIAASFYSPNMNVGNGNFFHLLKRLDECILYVEGNPQYAESSVYLLKFRQLQVQA**************GVEASLIYVRFKAAASELKPVLEEIESRSSKKEYVQILEECHKLYCEQRLSLVKGIVQQRISEFSKKETLPSLTRSGCAYLMQVCQLEHQLFDHFFPSSSEDISSLAPLIDPLSTFLYDILRPKLIHETNVDLLCELVDILKVEVLGEQLSRRSESLAGLRPTLERILADVHERLTFRARTHIRDEIANYIPSDEDLNYPSKLEQSAGTKLETTPADENPDVYKTWYPPLEKTVSCLSKLYQCLEQAVFTGLAQEAVEVCSESIQKASKLIAKRSTPMDGQLFLIKYLLILREQIAPFDIEFSVTHKELDFSHLLEHLRRILRGQASLFDWSRSTSLARTLSPRVLESQIDAKKELEKSLKATCEEFIMAVTKLVVDPMLSFVAKVTAVKVALSSGNQNQNVDSLMAKPLKDQAFATPDKVAELVHKVNAAIQQELPPVMAKMKLYLQNPSTRTILFKPVKTNIVEAHIQVQSLLKAEYMPEEQSIINMVSMPDLQAQLDSLL
*********************NFASTWEQNAPLSEQQQAAIGSLFHVVAERPFPVNLA***************************AVLVNTNQFYNWFTDLELAMKSETEEKYRHYVNTLMGRIQTCDDILRQVDGTLDLFNELQLQHHAVATKTKTLHDACDRLVIEKQRLIEFAEAVQSKLKYFDELENIAASFYSPNMNVGNGNFFHLLKRLDECILYVEGNPQYAESSVYLLKFRQLQVQAAIRSSGGSKTSVSEGVEASLIYVRFKAAASELKPVLEEIESRSSKKEYVQILEECHKLYCEQRLSLVKGIVQQRISEFSKKETLPSLTRSGCAYLMQVCQLEHQLFDHFFPSSSEDISSLAPLIDPLSTFLYDILRPKLIHETNVDLLCELVDILKVEVLGEQLSRRSESLAGLRPTLERILADVHERLTFRARTHIRDEIANYIPSDEDLNYPSKLEQSAG*********ENPDVYKTWYPPLEKTVSCLSKLYQCLEQAVFTGLAQEAVEVCSESIQKASKLIAKRSTPMDGQLFLIKYLLILREQIAPFDIEFSVTHKELDFSHLLEHLRRILRGQASLFDWSRSTSLARTLSPRVLESQIDAKKELEKSLKATCEEFIMAVTKLVVDPMLSFVAKVTAVKVALSSG****NVDSLMAKPLKDQAFATPDKVAELVHKVNAAIQQELPPVMAKMKLYLQNPSTRTILFKPVKTNIVEAHIQVQSLLKAEYMPEEQSIINMVSMPDLQAQLDSLL
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MANKSASPSSLPKSGAVSRGYNFASTWEQNAPLSEQQQAAIGSLFHVVAERPFPVNLAQEHVPGQDNGLSVATKDHSFGESDAIEAVLVNTNQFYNWFTDLELAMKSETEEKYRHYVNTLMGRIQTCDDILRQVDGTLDLFNELQLQHHAVATKTKTLHDACDRLVIEKQRLIEFAEAVQSKLKYFDELENIAASFYSPNMNVGNGNFFHLLKRLDECILYVEGNPQYAESSVYLLKFRQLQVQAAIRSSGGSKTSVSEGVEASLIYVRFKAAASELKPVLEEIESRSSKKEYVQILEECHKLYCEQRLSLVKGIVQQRISEFSKKETLPSLTRSGCAYLMQVCQLEHQLFDHFFPSSSEDISSLAPLIDPLSTFLYDILRPKLIHETNVDLLCELVDILKVEVLGEQLSRRSESLAGLRPTLERILADVHERLTFRARTHIRDEIANYIPSDEDLNYPSKLEQSAGTKLETTPADENPDVYKTWYPPLEKTVSCLSKLYQCLEQAVFTGLAQEAVEVCSESIQKASKLIAKRSTPMDGQLFLIKYLLILREQIAPFDIEFSVTHKELDFSHLLEHLRRILRGQASLFDWSRSTSLARTLSPRVxxxxxxxxxxxxxxxxxxxxxFIMAVTKLVVDPMLSFVAKVTAVKVALSSGNQNQNVDSLMAKPLKDQAFATPDKVAELVHKVNAAIQQELPPVMAKMKLYLQNPSTRTILFKPVKTNIVEAHIQVQSLLKAEYMPEEQSIINMVSMPDLQAQLDSLL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query762 2.2.26 [Sep-21-2011]
Q96JB2828 Conserved oligomeric Golg yes no 0.854 0.786 0.353 1e-118
Q8CI04820 Conserved oligomeric Golg yes no 0.935 0.869 0.336 1e-116
Q16ZN9899 Conserved oligomeric Golg N/A no 0.948 0.804 0.301 1e-104
Q961G1905 Conserved oligomeric Golg yes no 0.859 0.723 0.300 1e-103
Q29N70914 Conserved oligomeric Golg yes no 0.860 0.717 0.295 1e-100
Q54TT4925 Conserved oligomeric Golg yes no 0.939 0.774 0.285 3e-95
P40094801 Conserved oligomeric Golg yes no 0.650 0.619 0.243 4e-36
Q9Y7Z4735 Conserved oligomeric Golg yes no 0.643 0.666 0.236 3e-32
>sp|Q96JB2|COG3_HUMAN Conserved oligomeric Golgi complex subunit 3 OS=Homo sapiens GN=COG3 PE=1 SV=3 Back     alignment and function desciption
 Score =  426 bits (1094), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 256/725 (35%), Positives = 391/725 (53%), Gaps = 74/725 (10%)

Query: 93  QFYNWFTDLELAMKSETEEKYRHYVNTLMGRIQTCDDILRQVDGTLDLFNELQLQHHAVA 152
           QF++WF  L+  M  +   KYR   + L G  + CD IL  V+  L     LQ Q+  V+
Sbjct: 107 QFFSWFAKLQTQMDQDEGTKYRQMRDYLSGFQEQCDAILNDVNSALQHLESLQKQYLFVS 166

Query: 153 TKTKTLHDACDRLVIEKQRLIEFAEAVQSKLKYFDELENIAASFYSPNMNVGNGNFFHLL 212
            KT TLH+AC++L+ E+  L++ AE +Q KL YF+ELE I     SP ++V +  F  +L
Sbjct: 167 NKTGTLHEACEQLLKEQSELVDLAENIQQKLSYFNELETINTKLNSPTLSVNSDGFIPML 226

Query: 213 KRLDECILYVEGNPQYAESSVYLLKFRQLQVQA----AIRSSGGSKTSVSEGVEA----- 263
            +LD+CI Y+  +P + +  +YLLKF+Q   +A       +    +T  S+ ++      
Sbjct: 227 AKLDDCITYISSHPNFKDYPIYLLKFKQCLSKALHLMKTYTVNTLQTLTSQLLKRDPSSV 286

Query: 264 -------SLIYVRFKAAASELKPVLEEIESRSSK-KEYVQILEECHKLYCEQRLSLVKGI 315
                  +L YV+F+AAA +++ ++E+IE RS K  EY Q+L + H+ Y +QR  L+   
Sbjct: 287 PNADNAFTLFYVKFRAAAPKVRTLIEQIELRSEKIPEYQQLLNDIHQCYLDQRELLLGPS 346

Query: 316 VQQRISEFSKKETLP--SLTRSGCAYLMQVCQLEHQLFDHFFPSSSEDISSLAPLIDPLS 373
           +   ++E + +      +L RSGCA+++ VCQ EHQL++ FF   ++  S L  L++ L 
Sbjct: 347 IACTVAELTSQNNRDHCALVRSGCAFMVHVCQDEHQLYNEFF---TKPTSKLDELLEKLC 403

Query: 374 TFLYDILRPKLIHETNVDLLCELVDILKVEVLGEQLSRRSESLAGLRPTLERILADVHER 433
             LYD+ RP +IH  +++ L EL  ILK EVL + +   +E L      ++++L DV ER
Sbjct: 404 VSLYDVFRPLIIHVIHLETLSELCGILKNEVLEDHVQNNAEQLGAFAAGVKQMLEDVQER 463

Query: 434 LTFRARTHIRDEIANYIPSDEDLNYPSKL----------------------------EQS 465
           L +R   +I+ +I  Y P+  DL YP KL                            E+ 
Sbjct: 464 LVYRTHIYIQTDITGYKPAPGDLAYPDKLVMMEQIAQSLKDEQKKVPSEASFSDVHLEEG 523

Query: 466 AGTKLETTPADE--NP---------DVYKTWYPPLEKTVSCLSKLYQCLEQAVFTGLAQE 514
               L  + + E  NP         D++  WYP + +T+ CLSKLY+C+++AVF GL+QE
Sbjct: 524 ESNSLTKSGSTESLNPRPQTTISPADLHGMWYPTVRRTLVCLSKLYRCIDRAVFQGLSQE 583

Query: 515 AVEVCSESIQKASKLIAKRSTPMDGQLFLIKYLLILREQIAPFDIEFSVTHKELDFSHLL 574
           A+  C +S+  AS+ I+K  T +DGQLFLIK+LLILREQIAPF  EF++    LD     
Sbjct: 584 ALSACIQSLLGASESISKNKTQIDGQLFLIKHLLILREQIAPFHTEFTIKEISLDLKKTR 643

Query: 575 EHLRRILRGQA--SLFDWSRSTSLARTL---SPRVLESQIDAKKELEKSLKATCEEFIMA 629
           +   +IL        F  + + +L   L   +P + E  +D+KK++++ LK+ CE+FI  
Sbjct: 644 DAAFKILNPMTVPRFFRLNSNNALIEFLLEGTPEIREHYLDSKKDVDRHLKSACEQFIQQ 703

Query: 630 VTKLVVDPMLSFVAKVTAVKVALSSGNQNQNVDSLMAKPLKDQAFATPDKVAELVHKVNA 689
            TKL V+ +  F+ KV+A+K   S G             L  Q +A P KV +L      
Sbjct: 704 QTKLFVEQLEEFMTKVSALKTMASQGGPKYT--------LSQQPWAQPAKVNDLAATAYK 755

Query: 690 AIQQELPPVMAKMKLYLQNPSTRTILFKPVKTNIVEAHIQVQSLLKAEYMPEEQSIINMV 749
            I+ +LP  +  M LYL N  T  ILFKPV+ NI +   +  +LLK E+ PE+  II   
Sbjct: 756 TIKTKLPVTLRSMSLYLSNKDTEFILFKPVRNNIQQVFQKFHALLKEEFSPEDIQIIACP 815

Query: 750 SMPDL 754
           SM  L
Sbjct: 816 SMEQL 820
Involved in ER-Golgi transport.
Homo sapiens (taxid: 9606)
>sp|Q8CI04|COG3_MOUSE Conserved oligomeric Golgi complex subunit 3 OS=Mus musculus GN=Cog3 PE=1 SV=3 Back     alignment and function description
>sp|Q16ZN9|COG3_AEDAE Conserved oligomeric Golgi complex subunit 3 OS=Aedes aegypti GN=Cog3 PE=3 SV=1 Back     alignment and function description
>sp|Q961G1|COG3_DROME Conserved oligomeric Golgi complex subunit 3 OS=Drosophila melanogaster GN=Cog3 PE=1 SV=1 Back     alignment and function description
>sp|Q29N70|COG3_DROPS Conserved oligomeric Golgi complex subunit 3 OS=Drosophila pseudoobscura pseudoobscura GN=Cog3 PE=3 SV=1 Back     alignment and function description
>sp|Q54TT4|COG3_DICDI Conserved oligomeric Golgi complex subunit 3 OS=Dictyostelium discoideum GN=cog3 PE=3 SV=1 Back     alignment and function description
>sp|P40094|COG3_YEAST Conserved oligomeric Golgi complex subunit 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=COG3 PE=1 SV=1 Back     alignment and function description
>sp|Q9Y7Z4|COG3_SCHPO Conserved oligomeric Golgi complex subunit 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cog3 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query762
359484460783 PREDICTED: conserved oligomeric Golgi co 0.998 0.971 0.830 0.0
297839205784 hypothetical protein ARALYDRAFT_895203 [ 1.0 0.971 0.802 0.0
30698937784 sec34-like protein [Arabidopsis thaliana 1.0 0.971 0.798 0.0
22654989784 At1g73430/T9L24_16 [Arabidopsis thaliana 1.0 0.971 0.797 0.0
356547986783 PREDICTED: conserved oligomeric Golgi co 0.990 0.964 0.787 0.0
356565620782 PREDICTED: LOW QUALITY PROTEIN: conserve 0.990 0.965 0.783 0.0
357479305783 Conserved oligomeric Golgi complex subun 0.990 0.964 0.770 0.0
357479307781 Conserved oligomeric Golgi complex subun 0.988 0.964 0.769 0.0
449449220779 PREDICTED: conserved oligomeric Golgi co 0.994 0.973 0.749 0.0
414870282782 TPA: hypothetical protein ZEAMMB73_55010 0.990 0.965 0.732 0.0
>gi|359484460|ref|XP_002273836.2| PREDICTED: conserved oligomeric Golgi complex subunit 3-like [Vitis vinifera] gi|297738499|emb|CBI27744.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1342 bits (3473), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 651/784 (83%), Positives = 707/784 (90%), Gaps = 23/784 (2%)

Query: 1   MANKSASPSSLPKSGAVSRGYNFASTWEQNAPLSEQQQAAIGSLFHVVAERPFPVNLAQE 60
           MA K AS ++LPKS A+S+GYNFASTWEQNAPL+EQQQAAI +L H VAERPFP NL+ E
Sbjct: 1   MATKPAS-ATLPKSAAISKGYNFASTWEQNAPLTEQQQAAIATLSHAVAERPFPANLSHE 59

Query: 61  HVPGQDNGLSVATKDHSFGESDAIEAVLVNTNQFYNWFTDLELAMKSETEEKYRHYVNTL 120
           H+ G++NGLSV TKD+++ +S AIE VLVNTNQFY WFTDLE AMKSETEEKYRHYVNTL
Sbjct: 60  HISGRENGLSVNTKDNTWEDSGAIETVLVNTNQFYKWFTDLESAMKSETEEKYRHYVNTL 119

Query: 121 MGRIQTCDDILRQVDGTLDLFNELQLQHHAVATKTKTLHDACDRLVIEKQRLIEFAEAVQ 180
             RIQTCDDIL QVD TLDLFNELQLQH AVATKTKTLHDACDRL++EKQRLIEFAEA++
Sbjct: 120 TERIQTCDDILHQVDATLDLFNELQLQHQAVATKTKTLHDACDRLLVEKQRLIEFAEALR 179

Query: 181 SKLKYFDELENIAASFYSPNMNVGNGNFFHLLKRLDECILYVEGNPQYAESSVYLLKFRQ 240
           SKL YFDELEN+A SFYSPNMNVGN NF  LLKRLDECI YVE NPQYAESSVYL+KFRQ
Sbjct: 180 SKLNYFDELENVATSFYSPNMNVGNENFLPLLKRLDECISYVESNPQYAESSVYLVKFRQ 239

Query: 241 LQ---------------------VQAAIRSSGGSKTSVSEGVEASLIYVRFKAAASELKP 279
           LQ                     VQAAIRSSGGSK +VSE VEAS+IYVRFKAAASELKP
Sbjct: 240 LQSRALGMIRSHVVSVLKSASSQVQAAIRSSGGSKAAVSESVEASVIYVRFKAAASELKP 299

Query: 280 VLEEIESRSSKKEYVQILEECHKLYCEQRLSLVKGIVQQRISEFSKKETLPSLTRSGCAY 339
           +LE+IESRSS+KEYVQIL ECH+LYCEQR SL++GIV QRISEF+KKE LPSLTRSGCAY
Sbjct: 300 LLEDIESRSSRKEYVQILSECHRLYCEQRFSLIRGIVHQRISEFAKKEALPSLTRSGCAY 359

Query: 340 LMQVCQLEHQLFDHFFPSSSEDISSLAPLIDPLSTFLYDILRPKLIHETNVDLLCELVDI 399
           LMQVCQLEHQLFDHFFPSSSEDIS+LAPLIDPL T+LYD LRPKLIHETN+D LCEL+DI
Sbjct: 360 LMQVCQLEHQLFDHFFPSSSEDISNLAPLIDPLCTYLYDTLRPKLIHETNLDFLCELIDI 419

Query: 400 LKVEVLGEQLSRRSESLAGLRPTLERILADVHERLTFRARTHIRDEIANYIPSDEDLNYP 459
           LKVEVLGEQ+SRR ESLAGLRPTL RILADVHERLTFRARTHIRDEIANY+PS++DL+YP
Sbjct: 420 LKVEVLGEQISRRGESLAGLRPTLHRILADVHERLTFRARTHIRDEIANYLPSEDDLDYP 479

Query: 460 SKLEQSAGTKLETTPADENPDVYKTWYPPLEKTVSCLSKLYQCLEQAVFTGLAQEAVEVC 519
           +KLEQSA +K  TT ADENPDV+KTWYPPLEKT+SCLSKLY+CLE AVFTGLAQEAVEVC
Sbjct: 480 AKLEQSAESKSGTTSADENPDVFKTWYPPLEKTLSCLSKLYRCLEPAVFTGLAQEAVEVC 539

Query: 520 SESIQKASKLIAKRSTPMDGQLFLIKYLLILREQIAPFDIEFSVTHKELDFSHLLEHLRR 579
           S SIQKASKL+ KRS+PMDGQLFLIK+LLILREQIAPFDIEFSVTHKELDFSHLLEHLRR
Sbjct: 540 SLSIQKASKLVVKRSSPMDGQLFLIKHLLILREQIAPFDIEFSVTHKELDFSHLLEHLRR 599

Query: 580 ILRGQASLFDWSRSTSLARTLSPRVLESQIDAKKELEKSLKATCEEFIMAVTKLVVDPML 639
           ILRGQASLFDWSRSTSLARTLSPRVLESQIDAKKELEKSLKATCEEFIM+VTKLVVDPML
Sbjct: 600 ILRGQASLFDWSRSTSLARTLSPRVLESQIDAKKELEKSLKATCEEFIMSVTKLVVDPML 659

Query: 640 SFVAKVTAVKVALSSGNQNQNVDSLMAKPLKDQAFATPDKVAELVHKVNAAIQQELPPVM 699
           SFV KVTAVKVALSSG+QNQ +DS+MAKPLKDQAFATPDKVAELV KV+A++QQELP VM
Sbjct: 660 SFVTKVTAVKVALSSGSQNQKLDSVMAKPLKDQAFATPDKVAELVQKVSASLQQELPKVM 719

Query: 700 AKMKLYLQNPSTRTILFKPVKTNIVEAHIQVQSLLKAEYMPEE-QSIINMVSMPDLQAQL 758
            KMKLYLQNPSTRTILFKP+KTNIVEAHIQVQSLLK+EY PEE QS INMVS+ DLQAQL
Sbjct: 720 EKMKLYLQNPSTRTILFKPIKTNIVEAHIQVQSLLKSEYTPEEVQSTINMVSIQDLQAQL 779

Query: 759 DSLL 762
           D LL
Sbjct: 780 DHLL 783

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297839205|ref|XP_002887484.1| hypothetical protein ARALYDRAFT_895203 [Arabidopsis lyrata subsp. lyrata] gi|297333325|gb|EFH63743.1| hypothetical protein ARALYDRAFT_895203 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|30698937|ref|NP_177485.2| sec34-like protein [Arabidopsis thaliana] gi|186495067|ref|NP_001117595.1| sec34-like protein [Arabidopsis thaliana] gi|332197338|gb|AEE35459.1| sec34-like protein [Arabidopsis thaliana] gi|332197339|gb|AEE35460.1| sec34-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|22654989|gb|AAM98086.1| At1g73430/T9L24_16 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356547986|ref|XP_003542385.1| PREDICTED: conserved oligomeric Golgi complex subunit 3-like [Glycine max] Back     alignment and taxonomy information
>gi|356565620|ref|XP_003551037.1| PREDICTED: LOW QUALITY PROTEIN: conserved oligomeric Golgi complex subunit 3-like [Glycine max] Back     alignment and taxonomy information
>gi|357479305|ref|XP_003609938.1| Conserved oligomeric Golgi complex subunit [Medicago truncatula] gi|355510993|gb|AES92135.1| Conserved oligomeric Golgi complex subunit [Medicago truncatula] Back     alignment and taxonomy information
>gi|357479307|ref|XP_003609939.1| Conserved oligomeric Golgi complex subunit [Medicago truncatula] gi|355510994|gb|AES92136.1| Conserved oligomeric Golgi complex subunit [Medicago truncatula] Back     alignment and taxonomy information
>gi|449449220|ref|XP_004142363.1| PREDICTED: conserved oligomeric Golgi complex subunit 3-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|414870282|tpg|DAA48839.1| TPA: hypothetical protein ZEAMMB73_550102 [Zea mays] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query762
TAIR|locus:2206890784 AT1G73430 "AT1G73430" [Arabido 0.692 0.673 0.833 0.0
UNIPROTKB|Q16ZN9899 Cog3 "Conserved oligomeric Gol 0.439 0.372 0.303 2e-98
DICTYBASE|DDB_G0281511925 cog3 "Sec34-like family protei 0.517 0.425 0.377 2.4e-98
RGD|1304555828 Cog3 "component of oligomeric 0.381 0.351 0.389 2.7e-97
UNIPROTKB|J9P4I0830 COG3 "Uncharacterized protein" 0.406 0.373 0.376 2.9e-97
FB|FBgn0031536905 Cog3 "Cog3" [Drosophila melano 0.388 0.327 0.314 1.8e-95
ZFIN|ZDB-GENE-050913-26824 cog3 "component of oligomeric 0.473 0.438 0.352 1.3e-94
UNIPROTKB|Q96JB2828 COG3 "Conserved oligomeric Gol 0.381 0.351 0.387 1.8e-94
UNIPROTKB|F1LLY2802 Cog3 "Protein Cog3" [Rattus no 0.594 0.564 0.306 5e-94
MGI|MGI:2450151820 Cog3 "component of oligomeric 0.561 0.521 0.310 2.3e-93
TAIR|locus:2206890 AT1G73430 "AT1G73430" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2225 (788.3 bits), Expect = 0., Sum P(2) = 0.
 Identities = 441/529 (83%), Positives = 483/529 (91%)

Query:   235 LLKFRQLQVQAAIRSSGGSKTSVSEGVEASLIYVRFKAAASELKPVLEEIESRSSKKEYV 294
             +LK    QVQAA R +GG+KTSVSEGVEAS+IYVRFKAAA+ELKPVLEEIESRS++KEYV
Sbjct:   256 VLKTAASQVQAAFRGTGGNKTSVSEGVEASVIYVRFKAAANELKPVLEEIESRSARKEYV 315

Query:   295 QILEECHKLYCEQRLSLVKGIVQQRISEFSKKETLPSLTRSGCAYLMQVCQLEHQLFDHF 354
             QIL ECH+LYCEQRLSLVKGIV QR+S+F+KKE LPSLTRSGCAYLMQVC +EHQLF HF
Sbjct:   316 QILAECHRLYCEQRLSLVKGIVHQRVSDFAKKEALPSLTRSGCAYLMQVCHMEHQLFTHF 375

Query:   355 FPSSSEDISSLAPLIDPLSTFLYDILRPKLIHETNVDLLCELVDILKVEVLGEQLSRRSE 414
             FP+SSE++SSLAPL+DPLST+LYDILRPKLIHE N+DLLCELV ILKVEVLG+Q +R+SE
Sbjct:   376 FPASSEEVSSLAPLVDPLSTYLYDILRPKLIHEANIDLLCELVHILKVEVLGDQSARQSE 435

Query:   415 SLAGLRPTLERILADVHERLTFRARTHIRDEIANYIPSDEDLNYPSKLEQSAGTKLETTP 474
              LAGLRPTL+RILADV+ERLTFRART+IRDEIANY PSDEDL+YP+KLE S  T  ET  
Sbjct:   436 PLAGLRPTLQRILADVNERLTFRARTYIRDEIANYTPSDEDLDYPAKLEGSPNTTSETDL 495

Query:   475 AD-ENPDVYKTWYPPLEKTVSCLSKLYQCLEQAVFTGLAQEAVEVCSESIQKASKLIAKR 533
              D EN DV+KTWYPPLEKT+SCLSKLY+CLEQAVFTGLAQEAVEVCS SIQKASKLI KR
Sbjct:   496 RDDENADVFKTWYPPLEKTLSCLSKLYRCLEQAVFTGLAQEAVEVCSLSIQKASKLIIKR 555

Query:   534 STPMDGQLFLIKYLLILREQIAPFDIEFSVTHKELDFSHLLEHLRRILRGQASLFDWSRS 593
             ST MDGQLFLIK+LLILREQIAPFDIEFSVTHKELDFSHLLEHLRRILRGQASLFDWSRS
Sbjct:   556 STTMDGQLFLIKHLLILREQIAPFDIEFSVTHKELDFSHLLEHLRRILRGQASLFDWSRS 615

Query:   594 TSLARTLSPRVLESQIDAKKELEKSLKATCEEFIMAVTKLVVDPMLSFVAKVTAVKVALS 653
             TSLARTLSPRVLESQIDAKKELEK LK TCEEFIM+VTKLVVDPMLSFV KVTA+KVALS
Sbjct:   616 TSLARTLSPRVLESQIDAKKELEKCLKTTCEEFIMSVTKLVVDPMLSFVTKVTAIKVALS 675

Query:   654 SGNQNQNVDSLMAKPLKDQAFATPDKVAELVHKVNAAIQQELPPVMAKMKLYLQNPSTRT 713
             SG QN  VDS+MAKPLK+QAFATPDKV ELV KV AAIQQEL P++AKMKLYLQNPSTRT
Sbjct:   676 SGTQNHKVDSVMAKPLKEQAFATPDKVVELVQKVYAAIQQELLPILAKMKLYLQNPSTRT 735

Query:   714 ILFKPVKTNIVEAHIQVQSLLKAEYMPEEQSIINMVSMPDLQAQLDSLL 762
             ILFKP+KTNIVEAH QV+SLLKAEY  EEQ+ INM+S+ DLQ QLD+ L
Sbjct:   736 ILFKPIKTNIVEAHTQVESLLKAEYSAEEQANINMISIQDLQTQLDNFL 784
GO:0003674 "molecular_function" evidence=ND
GO:0005794 "Golgi apparatus" evidence=ISM
GO:0005801 "cis-Golgi network" evidence=IEA
GO:0006886 "intracellular protein transport" evidence=IEA
GO:0016020 "membrane" evidence=IEA
GO:0005829 "cytosol" evidence=IDA
UNIPROTKB|Q16ZN9 Cog3 "Conserved oligomeric Golgi complex subunit 3" [Aedes aegypti (taxid:7159)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0281511 cog3 "Sec34-like family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
RGD|1304555 Cog3 "component of oligomeric golgi complex 3" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|J9P4I0 COG3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
FB|FBgn0031536 Cog3 "Cog3" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050913-26 cog3 "component of oligomeric golgi complex 3" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q96JB2 COG3 "Conserved oligomeric Golgi complex subunit 3" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1LLY2 Cog3 "Protein Cog3" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:2450151 Cog3 "component of oligomeric golgi complex 3" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8CI04COG3_MOUSENo assigned EC number0.33660.93560.8695yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
scaffold_202277.1
annotation not avaliable (784 aa)
(Arabidopsis lyrata)
Predicted Functional Partners:
fgenesh2_kg.6__1174__AT5G11980.1
annotation not avaliable (568 aa)
    ••• 0.573
scaffold_103525.1
annotation not avaliable (680 aa)
   •••• 0.560
fgenesh2_kg.7__1785__AT4G24840.1
annotation not avaliable (756 aa)
    ••• 0.473
fgenesh2_kg.2__1031__AT1G67930.1
annotation not avaliable (832 aa)
   • •• 0.438

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query762
pfam04136157 pfam04136, Sec34, Sec34-like family 3e-26
>gnl|CDD|112929 pfam04136, Sec34, Sec34-like family Back     alignment and domain information 
 Score =  104 bits (262), Expect = 3e-26
 Identities = 45/134 (33%), Positives = 70/134 (52%)

Query: 112 KYRHYVNTLMGRIQTCDDILRQVDGTLDLFNELQLQHHAVATKTKTLHDACDRLVIEKQR 171
                +N L      CD IL Q +        L+ ++  V+ KT  L +AC++L  E+ R
Sbjct: 1   DAEKKINYLQTFTNICDQILGQTNNAESTLLSLKEKYEFVSKKTSELSEACEQLSTEQMR 60

Query: 172 LIEFAEAVQSKLKYFDELENIAASFYSPNMNVGNGNFFHLLKRLDECILYVEGNPQYAES 231
           L E A+ +Q  L YF  LE +     SP ++V + +F   L +LD CI+Y+E NP + +S
Sbjct: 61  LSELADGIQKGLTYFAPLEELNRVLRSPTLSVASVSFKEHLTKLDTCIMYIEENPDFKDS 120

Query: 232 SVYLLKFRQLQVQA 245
             YL K++Q   +A
Sbjct: 121 PHYLGKYKQCLSKA 134

Sec34 and Sec35 form a sub-complex, in a seven protein complex that includes Dor1 (pfam04124). This complex is thought to be important for tether vesicles to the Golgi. Length = 157

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 762
KOG2604733 consensus Subunit of cis-Golgi transport vesicle t 100.0
PF04136157 Sec34: Sec34-like family ; InterPro: IPR007265 Sec 100.0
PF06419618 COG6: Conserved oligomeric complex COG6; InterPro: 99.2
PF09763701 Sec3_C: Exocyst complex component Sec3; InterPro: 97.17
KOG3758655 consensus Uncharacterized conserved protein [Funct 97.05
KOG2604733 consensus Subunit of cis-Golgi transport vesicle t 94.17
PF03081371 Exo70: Exo70 exocyst complex subunit; InterPro: IP 87.81
PF04129508 Vps52: Vps52 / Sac2 family ; InterPro: IPR007258 V 86.47
PF10191766 COG7: Golgi complex component 7 (COG7); InterPro: 81.84
COG3883265 Uncharacterized protein conserved in bacteria [Fun 81.07
>KOG2604 consensus Subunit of cis-Golgi transport vesicle tethering complex - Sec34p [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information 
Probab=100.00  E-value=7.4e-139  Score=1157.48  Aligned_cols=702  Identities=41%  Similarity=0.661  Sum_probs=634.8

Q ss_pred             CCCccchhhhchHhhhhhhCCCCHHHHHHHHHHHHhhccCCCCccccccCCCCCCCCCcccccCCCCCCcchhhhhhcCh
Q 004305           12 PKSGAVSRGYNFASTWEQNAPLSEQQQAAIGSLFHVVAERPFPVNLAQEHVPGQDNGLSVATKDHSFGESDAIEAVLVNT   91 (762)
Q Consensus        12 ~~~~~~~~~~~~~~~We~~apLs~~Q~~~i~~l~~~~~~~plp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~   91 (762)
                      +..+|.++.+.....|+..|||+|+|+..+..+.++..++|-|+.++.++.+... +     .|-++|     ..++.++
T Consensus         3 ~~~~ar~~~~~~~~~~~~~a~l~e~q~~~~l~~~~~~~~~~~p~~l~~e~~~s~~-~-----~d~~l~-----~~~~~~~   71 (733)
T KOG2604|consen    3 DQREARSRLNYWDRETDNDAPLPEQQTLENLELVHALSKEPRPSLLPIENSSSLT-S-----QDISLG-----EENLTNT   71 (733)
T ss_pred             chhHHHHHhhhhhcccccCCCCcHHHHHHHHHHHHHHHhCCCcccccccccccCC-C-----CCccCC-----cccccch
Confidence            3456777777777888889999999999999999999999999998877531111 1     123333     4678999


Q ss_pred             HHHHhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 004305           92 NQFYNWFTDLELAMKSETEEKYRHYVNTLMGRIQTCDDILRQVDGTLDLFNELQLQHHAVATKTKTLHDACDRLVIEKQR  171 (762)
Q Consensus        92 ~~F~~W~~~le~~~~~~~~~~y~~y~~~L~~~~~~~d~ll~~~~~~l~~l~~L~~~~~~V~~kT~~l~~~ce~Ll~eq~~  171 (762)
                      .+|+.||+++...+...++.+|+.|+++|....++|+.+|+|++++++.|++|..+|++|+.||++||++||+|+.||.+
T Consensus        72 ~~f~~wf~~~~~~~~~~~~~~y~~y~d~l~~~~~~c~~il~q~~~~~~~l~sl~~k~~~vs~kt~~l~eace~l~~eq~k  151 (733)
T KOG2604|consen   72 NQFLSWFTDLMNPIKQISRPKYRIYLDQLKKRIEECDAILDQTNNALDTLLSLQKKFEFVSQKTSALHEACEQLLEEQSK  151 (733)
T ss_pred             hhhhHHHHhhhhHHhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcccchhhHHHHHHhhCCCCCccCCccHHHHHHHHHHHHHHhhhCCCCcchHHHHHHHHHHHHHHH--HHh
Q 004305          172 LIEFAEAVQSKLKYFDELENIAASFYSPNMNVGNGNFFHLLKRLDECILYVEGNPQYAESSVYLLKFRQLQVQAA--IRS  249 (762)
Q Consensus       172 L~~~ae~I~~~L~yF~~Le~i~r~L~sp~~~V~~~~F~~~L~~LD~ci~Fl~~hp~fkda~~Y~~rfkq~l~~a~--ir~  249 (762)
                      |.++||.|+.+|+||++||+++|+||+|+.+|++.+|.+||.+||+||.|+++||+|||++.|+.||||||.||.  ||.
T Consensus       152 l~elae~I~k~L~yF~~le~l~~~l~~pt~~v~~~sF~~~l~~ld~ci~~l~en~~fkd~~~Y~~k~kqcL~kA~~lik~  231 (733)
T KOG2604|consen  152 LSELAEGIRKKLHYFAELEELNRRLNHPTLSVGKVSFKEMLAKLDECIMFLEENPDFKDAPAYLGKYKQCLSKALGLIKT  231 (733)
T ss_pred             HHHHHHHHHHhhhhHHHHHHHHHhhcCcchhhhhhhHHHHHHHHHHHHHHHHhCCchhhhHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999999999999999999998873  332


Q ss_pred             cc-------------CC-CCCCCchhhhhHHHHHHHHHHHhHHHHHHHHHhhhChhHHhHHHHHHHHHHHHHHhhhhhHH
Q 004305          250 SG-------------GS-KTSVSEGVEASLIYVRFKAAASELKPVLEEIESRSSKKEYVQILEECHKLYCEQRLSLVKGI  315 (762)
Q Consensus       250 ~~-------------~~-~~~~s~~~~~aLlY~kF~~~a~~lk~Li~eie~R~~~~Ey~slL~dc~~~Yf~~R~~LL~p~  315 (762)
                      +.             .. +.....++.++++|+||.++|+++|+++++||+|+.++||.++|.+||+.||++|.+|++|+
T Consensus       232 y~~~vlkq~t~q~l~~~~~~~~~~~~~~sl~Y~kf~aaa~~~k~~i~eie~rs~~~e~~qlL~~~~~~Y~~qRl~ll~pv  311 (733)
T KOG2604|consen  232 YFTNVLKQTTSQVLKRSKNMNPHADLAFSLFYVKFSAAAHKLKPVIEEIEKRSEKEEYDQILAECHQHYFQQRLRLLKPV  311 (733)
T ss_pred             HHHHHHHHHHHHHhccCCCCCCccchhhhhhhhHHHHHHhhhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcc
Confidence            10             01 11223356799999999999999999999999999889999999999999999999999999


Q ss_pred             HHHHHHhHhccCCchhhHHhHHHHHHHHHHHHHHhhcccCCCCccchhchhhhHHHHHHHHHHhhcccccccCCHHHHHH
Q 004305          316 VQQRISEFSKKETLPSLTRSGCAYLMQVCQLEHQLFDHFFPSSSEDISSLAPLIDPLSTFLYDILRPKLIHETNVDLLCE  395 (762)
Q Consensus       316 i~~~l~~~~~~~~l~~l~r~~~~~l~~~C~~E~~Lf~~FF~~~~s~~~~l~~~le~Lc~~LYd~lRp~Ii~e~~L~~Lce  395 (762)
                      |+.+|.+++..+++|+++|+||+||+++|.||++||.+||+.+.   ..+..|+++||.++||..||+|+|+.|+++||+
T Consensus       312 i~~~i~~~~~~~~~~s~~rsg~afl~~~c~dE~kLf~Eff~~~~---f~~~~~~~~lc~~lyd~~r~~ilh~~~l~tL~e  388 (733)
T KOG2604|consen  312 IDYHIKEFFVKKDLCSLIRSGCAYLQQTCADENKLFREFFIMGD---FKLMHYLENLCQSLYDNSRPLILHEKHLETLCE  388 (733)
T ss_pred             hHHHHHHHHHhcchHHHHHHHHHHHHHHHhhHHHHHHhhcCCCc---hHHHHHHHHhchHhhcchhhHHHHHHHHHHHHH
Confidence            99999999988899999999999999999999999999999873   689999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhhhhccchhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccCCCchhhhhccCCCCC---C
Q 004305          396 LVDILKVEVLGEQLSRRSESLAGLRPTLERILADVHERLTFRARTHIRDEIANYIPSDEDLNYPSKLEQSAGTKLE---T  472 (762)
Q Consensus       396 l~~iL~~e~l~e~~~~~~~~~~~~~~~~~~lLqD~QeRLifRaq~yi~~~I~~Y~P~~~DL~yP~kL~~~~~~~~~---~  472 (762)
                      .|++++.++++++.+   ....+++..++||++|+||||+||+|+||+++|.+|+|++|||+||+|+++......+   .
T Consensus       389 ~~si~~~~~le~~~~---~~~~~~~~~~~~il~dvqeRL~fr~~~yiq~dI~~y~Pt~~dL~~~~k~~~~~~~~~~l~~~  465 (733)
T KOG2604|consen  389 VCSILQSEQLEEHVQ---ERLDAFAEFLNPILQDVQERLVFRVQTYIQTDIQNYSPTEEDLAYPAKLEMSEFILQSLRLS  465 (733)
T ss_pred             HHHhhccHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhcCCCChhhccchHHHHhhHHHHhhccCC
Confidence            999999999988765   2333789999999999999999999999999999999999999999999985422111   0


Q ss_pred             CCC------CCCccccccCCchHHHHHHHHHhhhhccChhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHh
Q 004305          473 TPA------DENPDVYKTWYPPLEKTVSCLSKLYQCLEQAVFTGLAQEAVEVCSESIQKASKLIAKRSTPMDGQLFLIKY  546 (762)
Q Consensus       473 ~~~------~~~~~~~~~wYPpl~ktL~lLSkly~~v~~~VF~~LA~eaV~~Ci~SL~~A~~~i~~~~~~~Dg~LFlIKh  546 (762)
                      ++.      ......-.+| |||+|||.||||||+|||+.||+|+||+++|.||+||.+|++.|+++++++||+||+|||
T Consensus       466 D~e~~~~~~~~~~~~~~s~-p~v~kTL~~LSklYrcids~vf~~lA~~~~~~CI~Sl~~A~~~i~knk~~lDa~LfliKh  544 (733)
T KOG2604|consen  466 DEEKLDSDVPQKSAMTESW-PPVRKTLVCLSKLYRCIDSPVFDGLAQEALEDCIQSLSGAYKDISKNKTKLDAELFLIKH  544 (733)
T ss_pred             chhhhcchhhhhhccccCC-chHHHHHHHHHHHHHHhccHhhhhHHHHHHHHHHHHHHhHHHHhhhccccccchhhHHHH
Confidence            100      0112234567 999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhccccccccccccccccchhhHHHHHHHHccCcccccccchhhhhhh---cccchhhhhhhhHHHHHHHHHHHH
Q 004305          547 LLILREQIAPFDIEFSVTHKELDFSHLLEHLRRILRGQASLFDWSRSTSLART---LSPRVLESQIDAKKELEKSLKATC  623 (762)
Q Consensus       547 LLiLReQi~~Fdi~f~~~e~~lDFs~~~~~~~~ll~~~~~lf~~ss~~~l~~~---l~P~v~e~~~Dsk~eld~~Lk~~c  623 (762)
                      ||||||||+||+|+|+++|+++|||++++++++++.+...||+++++|+++++   ++|+|+++++|+|+|||.+||.+|
T Consensus       545 LLiLReQiapFriq~tv~e~~lDfs~v~~a~~~vl~~~~~~f~ls~~nallell~E~tp~v~e~~lDsrkeld~qLr~a~  624 (733)
T KOG2604|consen  545 LLILREQIAPFRIQFTVKETSLDFSKVREAFRSVLSNTSKWFSLSSNNALLELLRELTPKVRESQLDSRKELDQQLRSAC  624 (733)
T ss_pred             HHHHHHhccccceeeeeccccccHHHHHHHHHHHHhcccchhhcccchHHHHHHHHcChHHHHhhhhHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999998889999999987664   599999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhhHHHHHHHHHHHHhhhcCCCCcccchhcccccccccccChhHHHHHHHHHHHHHHhhcHHHHHHHH
Q 004305          624 EEFIMAVTKLVVDPMLSFVAKVTAVKVALSSGNQNQNVDSLMAKPLKDQAFATPDKVAELVHKVNAAIQQELPPVMAKMK  703 (762)
Q Consensus       624 e~fI~~~t~~i~~pl~~f~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~q~fa~p~~i~~~~~~~~~~i~~~lp~~~~~m~  703 (762)
                      ++||+.++..+++|+.+|+.++.+.+.+.....++-+........+.+++||.|..|..++.++...+...++.++..|.
T Consensus       625 ~~fi~~asll~v~~l~~~i~~s~de~~~~~~~~p~~k~~~~~i~~~~q~~~a~~~~V~~lv~~v~~~~~~~~~~~~~~~~  704 (733)
T KOG2604|consen  625 EKFIESASLLVVGDLLDFILKSIDELLKYSQATPEHKESLAAIYLLEQSAWAAPTKVTVLVEAVQELIKNKLYVIQASME  704 (733)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchhHHHHHHHHhhhHhhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence            99999999999999999999999988776555554444444567788999999999999999999999999999999999


Q ss_pred             hhcCChhHHHHhHHHHHHHHHHHHHHHH
Q 004305          704 LYLQNPSTRTILFKPVKTNIVEAHIQVQ  731 (762)
Q Consensus       704 lYL~d~~t~~iL~~pI~~~i~~~~~q~~  731 (762)
                      +|+.|+.+.++.++||+++|+|.|..|.
T Consensus       705 ~~~sn~~~~f~~f~~~~n~i~q~f~~~~  732 (733)
T KOG2604|consen  705 LLLSNDDENFIYFQPVRNNIQQVFYKFM  732 (733)
T ss_pred             HHhhcCcccchhhhHHHHHHHHHHHHhh
Confidence            9999999999999999999999998864

>PF04136 Sec34: Sec34-like family ; InterPro: IPR007265 Sec34 and Sec35 form a sub-complex in a seven-protein complex that includes Dor1 Back     alignment and domain information
>PF06419 COG6: Conserved oligomeric complex COG6; InterPro: IPR010490 COG6 is a component of the conserved oligomeric golgi complex, which is composed of eight different subunits and is required for normal golgi morphology and localisation Back     alignment and domain information
>PF09763 Sec3_C: Exocyst complex component Sec3; InterPro: IPR019160 The exocyst complex is composed of 8 subunits: Exoc1, Exoc2, Exoc3, Exoc4, Exoc5, Exoc6, Exoc7 and Exoc8 Back     alignment and domain information
>KOG3758 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG2604 consensus Subunit of cis-Golgi transport vesicle tethering complex - Sec34p [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF03081 Exo70: Exo70 exocyst complex subunit; InterPro: IPR004140 The Exo70 protein forms one subunit of the exocyst complex Back     alignment and domain information
>PF04129 Vps52: Vps52 / Sac2 family ; InterPro: IPR007258 Vps52 complexes with Vps53 and Vps54 to form a multi-subunit complex involved in regulating membrane trafficking events [] Back     alignment and domain information
>PF10191 COG7: Golgi complex component 7 (COG7); InterPro: IPR019335 The conserved oligomeric Golgi (COG) complex is an eight-subunit (Cog1-8) peripheral Golgi protein involved in membrane trafficking and glycoconjugate synthesis [] Back     alignment and domain information
>COG3883 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query762
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-13
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 74.1 bits (181), Expect = 1e-13
 Identities = 107/710 (15%), Positives = 207/710 (29%), Gaps = 233/710 (32%)

Query: 36  QQQAAIGSLFHVVAERPFPVNLAQEHVPGQDNGLSVATK---DHSFGESDAIEAVLV--- 89
           + Q     +  V  E  F  N   + V  QD   S+ +K   DH     DA+   L    
Sbjct: 13  EHQYQYKDILSVF-EDAFVDNFDCKDV--QDMPKSILSKEEIDHIIMSKDAVSGTLRLFW 69

Query: 90  -----NTN---QF--------YNWFTD---LELAMKSETEEKYRHYVNTLMGRIQ--TCD 128
                      +F        Y +       E    S     Y    + L    Q     
Sbjct: 70  TLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKY 129

Query: 129 DILRQVDGTLDLFNELQLQHHAVATKTKTLHDACDRLVIE------KQRLIEFAEAVQSK 182
           ++ R     L  + +L+            L  A   ++I+      K  +    +   S 
Sbjct: 130 NVSR-----LQPYLKLR-------QALLELRPA-KNVLIDGVLGSGKTWVA--LDVCLSY 174

Query: 183 --LKYFDELENIAASFYSPNMNVGNGNFFH-LLKRLDECILYVEGNPQYAESSVYLLKFR 239
                 D    I   F+   +N+ N N    +L+ L + +  ++ N          +K R
Sbjct: 175 KVQCKMDF--KI---FW---LNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLR 226

Query: 240 QLQVQAAIRSSGGSKTSVSEGVEASLIYVRFKAAASELKPVLEEIESRSSKKEYVQILE- 298
              +QA +R     +   S+  E  L+             VL  +++        +    
Sbjct: 227 IHSIQAELR-----RLLKSKPYENCLL-------------VLLNVQNA-------KAWNA 261

Query: 299 ---ECHKLYCEQRLSLVKGIVQQRISEFSKKETLPSLTRSGCAYLMQVCQLEHQLFDHFF 355
               C  L   +   +   +     +  S      +LT           +++  L   + 
Sbjct: 262 FNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPD---------EVK-SLLLKYL 311

Query: 356 PSSSEDISSLAPLIDPLSTFLYDILRPKLIHETNVDLLCELVDILKVEVLGEQLSR-RSE 414
               +D+       +P            +I E+  D L    +   V    ++L+     
Sbjct: 312 DCRPQDLPREVLTTNPRRL--------SIIAESIRDGLATWDNWKHVNC--DKLTTIIES 361

Query: 415 SLAGLRPTLERILADVHERLT-FRARTHIRDEIANYIPSDEDLNYPSKLEQSAGTKLETT 473
           SL  L P   R    + +RL+ F                    + P+ L       L   
Sbjct: 362 SLNVLEPAEYR---KMFDRLSVFP----------------PSAHIPTIL-------LSLI 395

Query: 474 PADENPDVYKTWYPPLEKTVSCLSKLYQCLEQAVFTGLAQEAVEVCSESIQKASKLIAKR 533
                      W+  ++                         V V    + K S L+ K+
Sbjct: 396 -----------WFDVIK-----------------------SDVMVVVNKLHKYS-LVEKQ 420

Query: 534 STPMDGQLFLIKYLLILREQIAPFDIEFSVTHKEL--------------------D---F 570
             P +  + +    + L  +    + E+++ H+ +                    D   +
Sbjct: 421 --PKESTISI--PSIYLELK-VKLENEYAL-HRSIVDHYNIPKTFDSDDLIPPYLDQYFY 474

Query: 571 SHLLEHLRRILRGQ-ASLF-----D--------------WSRSTSLARTLSP-RVLESQI 609
           SH+  HL+ I   +  +LF     D              W+ S S+  TL   +  +  I
Sbjct: 475 SHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYI 534

Query: 610 -DAKKELEKSLKATCEEFIMAV-TKLVVDPMLSFVAKVTAVKVALSSGNQ 657
            D   + E+ + A   +F+  +   L+             +++AL + ++
Sbjct: 535 CDNDPKYERLVNAI-LDFLPKIEENLICSKYTDL------LRIALMAEDE 577
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query762
2pft_A571 Exocytosis protein; helix-turn-helix, endocytosis- 97.4
2b1e_A564 Exocyst complex component EXO70; tethering complex 96.99
>2pft_A Exocytosis protein; helix-turn-helix, endocytosis-exocytosis complex; 2.25A {Mus musculus} Back     alignment and structure
Probab=97.40  E-value=0.34  Score=55.90  Aligned_cols=80  Identities=11%  Similarity=0.156  Sum_probs=55.9

Q ss_pred             hhHHHHHHHHHHHHHHhhcHHHHHHHHhhc-CChhHHHHhHHHHHHHHHHHHHHHHHHHHh-cCChhhhhccCCCCHHHH
Q 004305          677 PDKVAELVHKVNAAIQQELPPVMAKMKLYL-QNPSTRTILFKPVKTNIVEAHIQVQSLLKA-EYMPEEQSIINMVSMPDL  754 (762)
Q Consensus       677 p~~i~~~~~~~~~~i~~~lp~~~~~m~lYL-~d~~t~~iL~~pI~~~i~~~~~q~~~~~~~-~Y~~e~~~~i~~~~~~~l  754 (762)
                      ++.|++....|....++    +++.-+.|. .|++.+.-|-..|.+.|+.+|..|++-... +++..--.-| =-||++|
T Consensus       485 r~~iKe~fk~Fn~~Fee----~~~~q~~w~VpD~~LR~~Lr~~i~~~v~paY~~F~~r~~~~~~~k~~~Kyi-Kytpe~l  559 (571)
T 2pft_A          485 RQMIKERFKGFNDGLEE----LCKIQKVWAIPDTEQRDKIRQAQKDIVKETYGAFLHRYGSVPFTKNPEKYI-KYRVEQV  559 (571)
T ss_dssp             HHHHHHHHHHHHHHHHH----HHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCSCHHHHC-CCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHH----HHHhCCcccCcCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCcccCCCCCcc-ccCHHHH
Confidence            45677777788776666    666556665 799999999999999999999998887654 2111000111 2367788


Q ss_pred             HHHhhhc
Q 004305          755 QAQLDSL  761 (762)
Q Consensus       755 ~~~l~~~  761 (762)
                      ..+|+.|
T Consensus       560 e~~L~~L  566 (571)
T 2pft_A          560 GDMIDRL  566 (571)
T ss_dssp             HHHHHTS
T ss_pred             HHHHHHH
Confidence            8877665
>2b1e_A Exocyst complex component EXO70; tethering complex, endocytosis/exocytosis complex; 2.00A {Saccharomyces cerevisiae} PDB: 2b7m_A 2pfv_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query762
d2b7ma1551 Exocyst complex component EXO70 {Baker's yeast (Sa 96.88
>d2b7ma1 a.118.17.2 (A:73-623) Exocyst complex component EXO70 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Cullin repeat-like
family: Exocyst complex component
domain: Exocyst complex component EXO70
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.88  E-value=0.47  Score=51.78  Aligned_cols=77  Identities=19%  Similarity=0.278  Sum_probs=46.6

Q ss_pred             hhHHHHHHHHHHHHHHhhcHHHHHHHHh-hcCChhHHHHhHHHHHHHHHHHHHHHHHHHHhcCChhhhh---ccCCCCHH
Q 004305          677 PDKVAELVHKVNAAIQQELPPVMAKMKL-YLQNPSTRTILFKPVKTNIVEAHIQVQSLLKAEYMPEEQS---IINMVSMP  752 (762)
Q Consensus       677 p~~i~~~~~~~~~~i~~~lp~~~~~m~l-YL~d~~t~~iL~~pI~~~i~~~~~q~~~~~~~~Y~~e~~~---~i~~~~~~  752 (762)
                      ++.|++....|....++    ++++=+. .+.|++.+.-|-..|+..|+-+|..|++-    |.+-...   -|. =+|+
T Consensus       470 k~~iKekFk~FN~~Fee----~~~~q~~~~i~D~~LR~~L~~~i~~~v~p~Y~~F~~r----y~~~~k~~~KyiK-Y~p~  540 (551)
T d2b7ma1         470 KEQIKEKFRKFNEGFED----LVSKTKQYKLSDPSLKVTLKSEIISLVMPMYERFYSR----YKDSFKNPRKHIK-YTPD  540 (551)
T ss_dssp             ------------CHHHH----HHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHHHHH----TTCSSSCSTTTCC-CCHH
T ss_pred             HHHHHHHHHHHHHHHHH----HHHHhCCccCcCHHHHHHHHHHHHHHHHHHHHHHHHH----hcccCCCCCceec-cCHH
Confidence            34577777888877776    4444444 46699999999999999999999997664    3311111   122 3789


Q ss_pred             HHHHHhhhcC
Q 004305          753 DLQAQLDSLL  762 (762)
Q Consensus       753 ~l~~~l~~~~  762 (762)
                      +|..+|++|+
T Consensus       541 ~le~~L~~L~  550 (551)
T d2b7ma1         541 ELTTVLNQLV  550 (551)
T ss_dssp             HHHHHHHTCC
T ss_pred             HHHHHHHHHc
Confidence            9999998874