Citrus Sinensis ID: 004307

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760--
MQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVPYSISI
cEEEEEEEEcccccccEEEEEEEccccEEEEEEEEEEccccccEEEEEcccccccccccccEEEEcccccccccccHHHHHHHHHHHHHHHccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHccccccccccccccccHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHcccccHHHHHHHccccccccccccccccccccccccccccccEEEEEEccccccccEEEEEccccccccccccEEEccccccccccHHHHHHHHHHHcccHHHHHHHHHHcccccccHHHHHHcccccccccHHHcccccHHHHcccHHHHHHHccccccEEEEEcccccHHHHHHHHHHHHccccccccccHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHEEEccccccccccccccccccccccccccccccccccccHHHHHHHHcccHHHHHcccccHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEcccccccccccccccccccc
cEEEEEEEEccccccccEEEEEEccccEEEEEEEEEEccccccEEEEEEEEEcEHHHccccEEEEcccccccccccHHHHHHHHHHHHHHHcccccccccccccccEEcEccccccccccccccccEcccccccccEEcccccEcccccccEcccccccccHHHccccccHHHcHHHHHHHHHHcHHHHHHHHHcccccccccHHHHHHHHHccccccccHHHHHHHcHcccHHHHcEEEcccEEEccccHHHcccccHHHcHHHHHHHHHHcccccccEEccccccccccccccccccccccccccccccccccccHHHHHHcccEEEEEcHHHHHHHHHHHHccccccccEEEEEEEEcccccEEEEEEEEcccccHHHccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccccHHHHHHHHHHccHHHHHHHHHHHccccccHHHHHcccHHHHHHHHHHHHHccccHHHHcHHHHHHHcccEEEcccccccEEEcccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHccHHHHHHHHHHHHcccHHHcccccccccccHHHHHHHHHHHHHHHcHHHHHHHccHHHHHcccccccccEcccccccccccHHHHHHHHcHHHHHHHHcccHHHHHHHHHHHHHHccEcccccEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHcccccccccccccccccEccccccEccccc
mqyesefevpsgfgeIGAILVENEHHKEMYLKDivldglpngpvnvtcnswlhskhdnkqkrvfftnklylpsqtpdglkrYRAEELTIlrgngqgerktydriydydvyndlgdpdkkpelarpvlggkqnpyprrcrtgrprcdtdqfsekregnfyvprdeaFSEVKQLTFSAKTVYSVLHALVPsletafvdpdlgfpyFSAIDALFnegvnlpplkqegfwnTLLPRLVKAIEDTgdnillfetpetmdrdkffwfrdeefsrqtlaglnpysirlitewplkstldpeiygppesaiTTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKsttlygsrtiffltpagtlrpiaieltrppmngkpqwkqvflpswhstECWLWKLAKAHVLAHDAGYHQLVSHWLrthcctepyviATNRqlsvmhpiyrlldphfryTMEINGLARQALVnadgiiessfspgkysmeFSSVAydkqwrfdhealpkdlisrglavedpsaphglkltiedypfandgLDLWDAIKQWVTDYVnhyypdkslvesDEELQAWWTEIrtvghgdkkhepwwpvlktpkdLIEIITTIVWVTSGhhaavnfgqytyggyfpnrpttarcniatedpsdeQWKFFLEkpenallntfpsqIQATKVMAILDVLsthspdeeylgkeiepawredpviNAAFEKFRGKLMELEGiidarnadpklrnrngagmvpyellkpfsepgvtgkgvpysisi
mqyesefevpsgfgEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKlylpsqtpdglkryRAEEltilrgngqgerktydrIYDYDVyndlgdpdkkpelarpvlggkqnpyprrcrtgrprcdtdqfsekregnfyvprdEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGdnillfetpetmdrDKFFWFRDEEFSrqtlaglnpySIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTiffltpagtlrPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTvghgdkkhepwwpvlktpKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLgkeiepawredpVINAAFEKFRGKLMELEGIIdarnadpklrnrnGAGMVPYEllkpfsepgvtgkgvpysisi
MQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVPYSISI
***********GFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDL********************************************FYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDAR*************MVPYELL*******************
MQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRG**QGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQNPYPRRCRTG***********KR*GNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAI**************QVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNAD*K***RNGAGMVPYELLKPFSEPGVTGKGVPYSISI
*********PSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVPYSISI
MQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVPYSIS*
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MQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVPYSISI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query762 2.2.26 [Sep-21-2011]
O24370899 Linoleate 13S-lipoxygenas N/A no 0.997 0.845 0.728 0.0
P38418896 Lipoxygenase 2, chloropla yes no 0.993 0.844 0.628 0.0
Q8GSM2896 Lipoxygenase 2.3, chlorop N/A no 0.993 0.844 0.601 0.0
Q84YK8941 Probable lipoxygenase 8, no no 0.998 0.808 0.606 0.0
P38419924 Lipoxygenase 7, chloropla no no 1.0 0.824 0.600 0.0
P93184936 Lipoxygenase 2.1, chlorop N/A no 0.992 0.807 0.574 0.0
Q9FNX8926 Lipoxygenase 4, chloropla no no 0.993 0.817 0.514 0.0
Q8GSM3932 Lipoxygenase 2.2, chlorop N/A no 0.984 0.804 0.533 0.0
O24371914 Linoleate 13S-lipoxygenas N/A no 0.992 0.827 0.532 0.0
Q9LNR3919 Lipoxygenase 3, chloropla no no 0.993 0.823 0.510 0.0
>sp|O24370|LOX21_SOLTU Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum GN=LOX2.1 PE=1 SV=1 Back     alignment and function desciption
 Score = 1191 bits (3081), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 557/765 (72%), Positives = 652/765 (85%), Gaps = 5/765 (0%)

Query: 2   QYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQK 61
            YE++F +P  FGE+GAIL+ENEHHKEMY+K+IV+DG  +G V +TCNSW+HSK DN  K
Sbjct: 136 HYEADFVIPQDFGEVGAILIENEHHKEMYVKNIVIDGFVHGKVEITCNSWVHSKFDNPDK 195

Query: 62  RVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPE 121
           R+FFTNK YLPSQTP G+ R R EEL  LRG+G GERK ++RIYDYDVYNDLG+ D   +
Sbjct: 196 RIFFTNKSYLPSQTPSGVSRLREEELVTLRGDGIGERKVFERIYDYDVYNDLGEADSNND 255

Query: 122 LA-RPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVY 180
            A RPVLGGK+ PYPRRC+TGRPR   D  SE R    YVPRDEAFSEVK + FS  TVY
Sbjct: 256 DAKRPVLGGKELPYPRRCKTGRPRSKKDPLSETRSTFVYVPRDEAFSEVKSVAFSGNTVY 315

Query: 181 SVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPL--KQEGFWNTLLPRLVKAIE 238
           SVLHA+VP+LE+   DP+LGFP+F AID+LFN GV+LP L  K+ G +N ++PRL+KAI 
Sbjct: 316 SVLHAVVPALESVVTDPNLGFPHFPAIDSLFNVGVDLPGLGDKKSGLFN-VVPRLIKAIS 374

Query: 239 DTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGP 298
           DT  ++LLFE+P+ + RDKF WFRD EF+RQTLAGLNPYSIRL+TEWPL+S LDP++YGP
Sbjct: 375 DTRKDVLLFESPQLVQRDKFSWFRDVEFARQTLAGLNPYSIRLVTEWPLRSKLDPKVYGP 434

Query: 299 PESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIF 358
           PES IT ELIEKEIG  ++VE+A++QKKLFILDYHDL LPYV KV +LK + LYGSRTIF
Sbjct: 435 PESEITKELIEKEIGNYMTVEQAVQQKKLFILDYHDLLLPYVNKVNELKGSMLYGSRTIF 494

Query: 359 FLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPS-WHSTECWLWKLAKAHVLAHDAGYHQL 417
           FLTP GTL+P+AIELTRPP++ KPQWK+V+ P+ W++T  WLWKLAKAHVL+HD+GYHQL
Sbjct: 495 FLTPQGTLKPLAIELTRPPVDDKPQWKEVYSPNDWNATGAWLWKLAKAHVLSHDSGYHQL 554

Query: 418 VSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESS 477
           VSHWLRTHCCTEPY+IA+NRQLS MHPIYRLL PHFRYTMEIN LAR+AL+NA+G+IESS
Sbjct: 555 VSHWLRTHCCTEPYIIASNRQLSAMHPIYRLLHPHFRYTMEINALAREALINANGVIESS 614

Query: 478 FSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGL 537
           F PGKY++E SS+AY  +WRFD EALP++LISRGLAVEDP+ PHGLKL IEDYPFANDGL
Sbjct: 615 FFPGKYAIELSSIAYGAEWRFDQEALPQNLISRGLAVEDPNEPHGLKLAIEDYPFANDGL 674

Query: 538 DLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDL 597
            LWD +KQWVT+YVNHYYP  +L+ESD+ELQAWW+EI+ VGHGDK+ EPWWP LKTP DL
Sbjct: 675 VLWDILKQWVTNYVNHYYPQTNLIESDKELQAWWSEIKNVGHGDKRDEPWWPELKTPNDL 734

Query: 598 IEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENA 657
           I IITTIVWVTSGHHAAVNFGQY+Y GYFPNRPT AR  + TEDP+ E+W++F+ KPE A
Sbjct: 735 IGIITTIVWVTSGHHAAVNFGQYSYAGYFPNRPTVARSKMPTEDPTAEEWEWFMNKPEEA 794

Query: 658 LLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELE 717
           LL  FPSQIQATKVMAILDVLS HSPDEEY+G++IEP W EDPVINAAFE F GKL ELE
Sbjct: 795 LLRCFPSQIQATKVMAILDVLSNHSPDEEYIGEKIEPYWAEDPVINAAFEVFSGKLKELE 854

Query: 718 GIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVPYSISI 762
           GIIDARN D KL NRNGAG++PYELLKP+SEPGVTGKGVPYSISI
Sbjct: 855 GIIDARNNDSKLSNRNGAGVMPYELLKPYSEPGVTGKGVPYSISI 899
Plant lipoxygenase involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence. May not be involved in the bulk production of jasmonate upon wounding. Catalyzes the hydroperoxidation of lipids containing a cis,cis-1,4-pentadiene structure. Linolenic acid is the preferred substrate, before linoleic and arachidonic acids. Has also some activity with phosphatidylglycerol, but not with galactolipids.
Solanum tuberosum (taxid: 4113)
EC: 1EC: .EC: 1EC: 3EC: .EC: 1EC: 1EC: .EC: 1EC: 2
>sp|P38418|LOX2_ARATH Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1 Back     alignment and function description
>sp|Q8GSM2|LOX23_HORVU Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1 Back     alignment and function description
>sp|Q84YK8|LOXC2_ORYSJ Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1 Back     alignment and function description
>sp|P38419|LOXC1_ORYSJ Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2 Back     alignment and function description
>sp|P93184|LOX21_HORVU Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1 Back     alignment and function description
>sp|Q9FNX8|LOX4_ARATH Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1 Back     alignment and function description
>sp|Q8GSM3|LOX22_HORVU Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare GN=LOX2.2 PE=1 SV=1 Back     alignment and function description
>sp|O24371|LOX31_SOLTU Linoleate 13S-lipoxygenase 3-1, chloroplastic OS=Solanum tuberosum GN=LOX3.1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LNR3|LOX3_ARATH Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query762
18461098 895 lipoxygenase [Citrus jambhiri] 0.994 0.846 0.837 0.0
71999171 903 lipoxygenase LOX2 [Populus deltoides] 0.998 0.842 0.758 0.0
224053392 897 predicted protein [Populus trichocarpa] 0.998 0.848 0.758 0.0
255544764 900 lipoxygenase, putative [Ricinus communis 0.996 0.843 0.757 0.0
71999169 898 lipoxygenase LOX1 [Populus deltoides] 1.0 0.848 0.753 0.0
213876486 900 lipoxygenase [Camellia sinensis] 1.0 0.846 0.761 0.0
308943877 901 lipoxygenase [Camellia sinensis] 1.0 0.845 0.757 0.0
229554825 901 lipoxygenase [Camellia sinensis] 1.0 0.845 0.756 0.0
255544760789 lipoxygenase, putative [Ricinus communis 0.998 0.964 0.740 0.0
32454712 900 lipoxygenase, partial [Nicotiana attenua 0.998 0.845 0.748 0.0
>gi|18461098|dbj|BAB84352.1| lipoxygenase [Citrus jambhiri] Back     alignment and taxonomy information
 Score = 1313 bits (3398), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 645/770 (83%), Positives = 677/770 (87%), Gaps = 12/770 (1%)

Query: 1   MQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQ 60
           +QYE+EF+VP  FGEIGAILV NEH  EMYLKDIVLDGLP+G V +TC SW+   + +K 
Sbjct: 130 VQYEAEFQVPVDFGEIGAILVVNEHALEMYLKDIVLDGLPSGLVTITCESWVQP-NTSKD 188

Query: 61  KRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKP 120
            R+FFTNK YLPS+TP+GL++ R  EL  LRGNG+GER+  DRIYDYDVYNDLGDPD+  
Sbjct: 189 PRIFFTNKSYLPSKTPNGLQKLRYAELVNLRGNGEGERQKADRIYDYDVYNDLGDPDEDE 248

Query: 121 ELARPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREGNF-------YVPRDEAFSEVKQLT 173
           EL RPVLGGKQ+PYPRRCRTGRP C TD+ SE+R  +        YVPRDE    +K+ T
Sbjct: 249 ELKRPVLGGKQHPYPRRCRTGRPHCKTDEASEERVPSKSLIPISPYVPRDEESRRLKETT 308

Query: 174 FSAKTVYS-VLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPR 232
           F  K + S    +L   LE+              ID LF EGV +   K   FW +LLP 
Sbjct: 309 FVIKGIVSDSCVSLNTKLESRICRHRWVSQTSQKIDKLFREGVKI---KDAEFWKSLLPG 365

Query: 233 LVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLD 292
            V+ I+D GD  L F +PET  RD+FFWFRDEEFSRQTLAGLNPYSIRLI EWPLKSTLD
Sbjct: 366 FVEEIKDIGDFFLRFTSPETFKRDRFFWFRDEEFSRQTLAGLNPYSIRLIAEWPLKSTLD 425

Query: 293 PEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLY 352
           PEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLY
Sbjct: 426 PEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLY 485

Query: 353 GSRTIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDA 412
           GSRTIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDA
Sbjct: 486 GSRTIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDA 545

Query: 413 GYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADG 472
           GYHQLVSHWL THCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADG
Sbjct: 546 GYHQLVSHWLNTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADG 605

Query: 473 IIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPF 532
           IIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPF
Sbjct: 606 IIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPF 665

Query: 533 ANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLK 592
           ANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKK EPWWP LK
Sbjct: 666 ANDGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKDEPWWPALK 725

Query: 593 TPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWKFFLE 652
           TP+DLIEIITTIVWVTSGHHAAVNFGQY YGGYFPNRPTTARCNIATEDPSDEQWKFFLE
Sbjct: 726 TPQDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLE 785

Query: 653 KPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGK 712
           KPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGK
Sbjct: 786 KPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGK 845

Query: 713 LMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVPYSISI 762
           LMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVPYSISI
Sbjct: 846 LMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVPYSISI 895

Source: Citrus jambhiri

Species: Citrus jambhiri

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|71999171|gb|AAZ57445.1| lipoxygenase LOX2 [Populus deltoides] Back     alignment and taxonomy information
>gi|224053392|ref|XP_002297796.1| predicted protein [Populus trichocarpa] gi|222845054|gb|EEE82601.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255544764|ref|XP_002513443.1| lipoxygenase, putative [Ricinus communis] gi|223547351|gb|EEF48846.1| lipoxygenase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|71999169|gb|AAZ57444.1| lipoxygenase LOX1 [Populus deltoides] Back     alignment and taxonomy information
>gi|213876486|gb|ACJ54281.1| lipoxygenase [Camellia sinensis] Back     alignment and taxonomy information
>gi|308943877|gb|ADO51752.1| lipoxygenase [Camellia sinensis] Back     alignment and taxonomy information
>gi|229554825|gb|ACQ76787.1| lipoxygenase [Camellia sinensis] Back     alignment and taxonomy information
>gi|255544760|ref|XP_002513441.1| lipoxygenase, putative [Ricinus communis] gi|223547349|gb|EEF48844.1| lipoxygenase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|32454712|gb|AAP83137.1| lipoxygenase, partial [Nicotiana attenuata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query762
TAIR|locus:2096915896 LOX2 "lipoxygenase 2" [Arabido 0.993 0.844 0.628 4.3e-276
UNIPROTKB|P38419924 CM-LOX1 "Lipoxygenase 7, chlor 0.997 0.822 0.602 5.8e-256
TAIR|locus:2030215926 LOX4 "lipoxygenase 4" [Arabido 0.993 0.817 0.516 2.3e-220
TAIR|locus:2018848919 LOX3 "lipoxygenase 3" [Arabido 0.993 0.823 0.510 8.4e-216
TAIR|locus:2008808917 LOX6 "lipoxygenase 6" [Arabido 0.989 0.822 0.502 1.4e-208
TAIR|locus:2011030859 LOX1 "lipoxygenase 1" [Arabido 0.982 0.871 0.468 8.7e-182
TAIR|locus:2087837886 LOX5 [Arabidopsis thaliana (ta 0.982 0.845 0.452 1.3e-178
UNIPROTKB|P29250870 LOX1.1 "Linoleate 9S-lipoxygen 0.981 0.859 0.434 1.1e-165
ZFIN|ZDB-GENE-060623-19676 zgc:136911 "zgc:136911" [Danio 0.418 0.471 0.327 3e-39
MGI|MGI:87999674 Alox5 "arachidonate 5-lipoxyge 0.528 0.597 0.298 1.1e-40
TAIR|locus:2096915 LOX2 "lipoxygenase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2654 (939.3 bits), Expect = 4.3e-276, P = 4.3e-276
 Identities = 481/765 (62%), Positives = 586/765 (76%)

Query:     2 QYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQK 61
             +YE EFE+P  FG +GAI ++N++H++++LK + L  LP G +  TC SW+  K  +  K
Sbjct:   136 KYECEFEMPEDFGPVGAIKIQNQYHRQLFLKGVELK-LPGGSITFTCESWVAPKSVDPTK 194

Query:    62 RVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQ---GERKTYDRIYDYDVYNDLGDPDK 118
             R+FF++K YLPSQTP+ LK+YR EEL  L+G  +   GE   ++RIYDYDVYND+GDPD 
Sbjct:   195 RIFFSDKSYLPSQTPEPLKKYRKEELETLQGKNREEVGEFTKFERIYDYDVYNDVGDPDN 254

Query:   119 KPELARPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREGN-FYVPRDEAFSEVKQLTFSAK 177
              PELARPV+GG  +PYPRRC+TGR  C+TD  SE+R G  FYVPRDE FS  K  +F+ K
Sbjct:   255 DPELARPVIGGLTHPYPRRCKTGRKPCETDPSSEQRYGGEFYVPRDEEFSTAKGTSFTGK 314

Query:   178 TVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAI 237
              V + L ++ P +E+  + P   FP+F AI  LF EG+ LP  K  G    LLPR++KA+
Sbjct:   315 AVLAALPSIFPQIESVLLSPQEPFPHFKAIQNLFEEGIQLP--KDAGLL-PLLPRIIKAL 371

Query:   238 EDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYG 297
              +  D+IL F+ P  ++RD+F W RD+EF+RQTLAGLNPYSI+L+ EWPL S LDP +YG
Sbjct:   372 GEAQDDILQFDAPVLINRDRFSWLRDDEFARQTLAGLNPYSIQLVEEWPLISKLDPAVYG 431

Query:   298 PPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTI 357
              P S IT E++E+E+ G ++V+EA+K K+LF+LDYHDL LPYV KVR+L +TTLY SRT+
Sbjct:   432 DPTSLITWEIVEREVKGNMTVDEALKNKRLFVLDYHDLLLPYVNKVRELNNTTLYASRTL 491

Query:   358 FFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQL 417
             FFL+   TLRP+AIELT PP   KPQWKQVF P + +T CWLW LAK H ++HDAGYHQL
Sbjct:   492 FFLSDDSTLRPVAIELTCPPNINKPQWKQVFTPGYDATSCWLWNLAKTHAISHDAGYHQL 551

Query:   418 VSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESS 477
             +SHWLRTH CTEPY+IA NRQLS MHPIYRLL PHFRYTMEIN  ARQ+LVN  GIIE+ 
Sbjct:   552 ISHWLRTHACTEPYIIAANRQLSAMHPIYRLLHPHFRYTMEINARARQSLVNGGGIIETC 611

Query:   478 FSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGL 537
             F PGKY++E SS  Y K WRFD E LP DLI RGLA ED +A HG++LTI DYPFANDGL
Sbjct:   612 FWPGKYALELSSAVYGKLWRFDQEGLPADLIKRGLAEEDKTAEHGVRLTIPDYPFANDGL 671

Query:   538 DLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDL 597
              LWDAIK+WVTDYV HYYPD+ L+ SDEELQ WW+E+R +GHGDKK EPWWPVLKT  DL
Sbjct:   672 ILWDAIKEWVTDYVKHYYPDEELITSDEELQGWWSEVRNIGHGDKKDEPWWPVLKTQDDL 731

Query:   598 IEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENA 657
             I ++TTI WVTSGHHAAVNFGQY YGGYFPNRPTT R  + TEDP+DE  K F E PE  
Sbjct:   732 IGVVTTIAWVTSGHHAAVNFGQYGYGGYFPNRPTTTRIRMPTEDPTDEALKEFYESPEKV 791

Query:   658 LLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELE 717
             LL T+PSQ QAT VM  LD+LSTHSPDEEY+G++ E +W  +PVINAAFE+F+GKL  LE
Sbjct:   792 LLKTYPSQKQATLVMVTLDLLSTHSPDEEYIGEQQEASWANEPVINAAFERFKGKLQYLE 851

Query:   718 GIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVPYSISI 762
             G+ID RN +  L+NR GAG+V YELLKP SE GVTG GVPYSISI
Sbjct:   852 GVIDERNVNITLKNRAGAGVVKYELLKPTSEHGVTGMGVPYSISI 896
GO:0009507 "chloroplast" evidence=ISM;ISS;IDA;TAS
GO:0005515 "protein binding" evidence=IPI
GO:0005737 "cytoplasm" evidence=IDA
GO:0009611 "response to wounding" evidence=IEP;RCA
GO:0080027 "response to herbivore" evidence=IEP
GO:0009941 "chloroplast envelope" evidence=IDA
GO:0009535 "chloroplast thylakoid membrane" evidence=IDA
GO:0009753 "response to jasmonic acid stimulus" evidence=IEP
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0009617 "response to bacterium" evidence=IEP
GO:0016165 "lipoxygenase activity" evidence=IMP;IDA
GO:0009620 "response to fungus" evidence=IEP
GO:0034440 "lipid oxidation" evidence=IDA
GO:0000023 "maltose metabolic process" evidence=RCA
GO:0000096 "sulfur amino acid metabolic process" evidence=RCA
GO:0006546 "glycine catabolic process" evidence=RCA
GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA
GO:0006733 "oxidoreduction coenzyme metabolic process" evidence=RCA
GO:0006766 "vitamin metabolic process" evidence=RCA
GO:0006816 "calcium ion transport" evidence=RCA
GO:0007030 "Golgi organization" evidence=RCA
GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA
GO:0009072 "aromatic amino acid family metabolic process" evidence=RCA
GO:0009106 "lipoate metabolic process" evidence=RCA
GO:0009108 "coenzyme biosynthetic process" evidence=RCA
GO:0009117 "nucleotide metabolic process" evidence=RCA
GO:0009269 "response to desiccation" evidence=RCA
GO:0009409 "response to cold" evidence=RCA
GO:0009416 "response to light stimulus" evidence=RCA
GO:0009651 "response to salt stress" evidence=RCA
GO:0009695 "jasmonic acid biosynthetic process" evidence=IMP;RCA;TAS
GO:0009737 "response to abscisic acid stimulus" evidence=RCA
GO:0015994 "chlorophyll metabolic process" evidence=RCA
GO:0015995 "chlorophyll biosynthetic process" evidence=RCA
GO:0016117 "carotenoid biosynthetic process" evidence=RCA
GO:0019216 "regulation of lipid metabolic process" evidence=RCA
GO:0019252 "starch biosynthetic process" evidence=RCA
GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA
GO:0019748 "secondary metabolic process" evidence=RCA
GO:0030003 "cellular cation homeostasis" evidence=RCA
GO:0031408 "oxylipin biosynthetic process" evidence=RCA
GO:0044272 "sulfur compound biosynthetic process" evidence=RCA
GO:0070838 "divalent metal ion transport" evidence=RCA
GO:0009414 "response to water deprivation" evidence=TAS
GO:0051707 "response to other organism" evidence=TAS
UNIPROTKB|P38419 CM-LOX1 "Lipoxygenase 7, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2030215 LOX4 "lipoxygenase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2018848 LOX3 "lipoxygenase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2008808 LOX6 "lipoxygenase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2011030 LOX1 "lipoxygenase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2087837 LOX5 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P29250 LOX1.1 "Linoleate 9S-lipoxygenase 2" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-060623-19 zgc:136911 "zgc:136911" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:87999 Alox5 "arachidonate 5-lipoxygenase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P93184LOX21_HORVU1, ., 1, 3, ., 1, 1, ., 1, 20.57410.99210.8076N/Ano
P38418LOX2_ARATH1, ., 1, 3, ., 1, 1, ., 1, 20.62870.99340.8448yesno
Q8GSM3LOX22_HORVU1, ., 1, 3, ., 1, 1, ., 1, 20.53340.98420.8047N/Ano
O24371LOX31_SOLTU1, ., 1, 3, ., 1, 1, ., 1, 20.53250.99210.8271N/Ano
O24370LOX21_SOLTU1, ., 1, 3, ., 1, 1, ., 1, 20.72810.99730.8453N/Ano
Q8GSM2LOX23_HORVU1, ., 1, 3, ., 1, 1, ., 1, 20.60180.99340.8448N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.13.110.691
3rd Layer1.13.11.120.946

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pg.C_LG_I000375
hypothetical protein; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding (By similarity) (897 aa)
(Populus trichocarpa)
Predicted Functional Partners:
CYP74A1
cytochrome P450 allene oxide synthase (EC-4.2.1.92) (526 aa)
     •• 0.902
gw1.XVIII.245.1
SubName- Full=Putative uncharacterized protein; (138 aa)
     •  0.899
gw1.XVI.1394.1
hypothetical protein (823 aa)
     •  0.899
gw1.40.286.1
phospholipase A1 (EC-3.1.1.32) (357 aa)
     •  0.899
fgenesh4_pg.C_LG_II001255
phospholipase A1 (EC-3.1.1.32) (367 aa)
     •  0.899
eugene3.00060391
hypothetical protein (856 aa)
     •  0.899
CYP74B7
cytochrome P450 fatty acid hydroperoxide lyase (492 aa)
     •  0.899
estExt_fgenesh4_pg.C_LG_VIII0936
SubName- Full=Putative uncharacterized protein; (642 aa)
     •  0.899
grail3.0064002701
SubName- Full=Putative uncharacterized protein; (382 aa)
      • 0.502

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query762
PLN02305918 PLN02305, PLN02305, lipoxygenase 0.0
pfam00305667 pfam00305, Lipoxygenase, Lipoxygenase 0.0
PLN02264919 PLN02264, PLN02264, lipoxygenase 0.0
PLN02337866 PLN02337, PLN02337, lipoxygenase 0.0
cd01751137 cd01751, PLAT_LH2, PLAT/ LH2 domain of plant lipox 3e-30
smart00308105 smart00308, LH2, Lipoxygenase homology 2 (beta bar 3e-13
pfam01477115 pfam01477, PLAT, PLAT/LH2 domain 1e-10
>gnl|CDD|215174 PLN02305, PLN02305, lipoxygenase Back     alignment and domain information 
 Score =  954 bits (2468), Expect = 0.0
 Identities = 419/768 (54%), Positives = 544/768 (70%), Gaps = 9/768 (1%)

Query: 1   MQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQ 60
           ++Y ++F VP  FG+ GA+LV N H KE YL +IV+ G  +GP+    N+W+HS+ DN +
Sbjct: 154 VEYAADFTVPFDFGKPGAVLVTNLHGKEFYLMEIVIHGFDDGPIFFPANTWIHSRKDNPE 213

Query: 61  KRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKP 120
            R+ F N+ YLPSQTP G+K  R E+L  LRGNG+GERK +DRIYDY  YNDLG+PDK  
Sbjct: 214 SRIIFRNQAYLPSQTPPGIKDLRREDLLSLRGNGKGERKPHDRIYDYAPYNDLGNPDKDE 273

Query: 121 ELARPVLGGKQNPYPRRCRTGRPRCDTDQFSEKR---EGNFYVPRDEAFSEVKQLTFSAK 177
           +LARPVLGG++ PYPRRCRTGRP    D   E R       YVPRDE F E+K+ TFSA 
Sbjct: 274 DLARPVLGGEEWPYPRRCRTGRPPTKKDPLCESRIEKPHPVYVPRDETFEEIKRNTFSAG 333

Query: 178 TVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLK-QEGFWNTLLPRLVKA 236
            + ++LH L+PS+  A    D+ F  FS ID L+N+G+ L   + ++   N  L   +K 
Sbjct: 334 RLKALLHNLIPSIAAALSSSDIPFTCFSDIDKLYNDGILLKTEEPKDIGLNPFLGNFMKQ 393

Query: 237 IEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIY 296
           +    + +L ++ P  + RD+F W RD EF+RQ LAG+NP +I ++ E+P+ S LDP +Y
Sbjct: 394 VLSVSERLLKYDIPAVIKRDRFAWLRDNEFARQALAGVNPVNIEILKEFPILSKLDPAVY 453

Query: 297 GPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRT 356
           GPPESA+T ELIE+E+ GM +VE+AI++K+LFILDYHD+ LP++EK+  L     Y SRT
Sbjct: 454 GPPESALTEELIERELEGM-TVEKAIEEKRLFILDYHDMLLPFIEKMNSLPERKAYASRT 512

Query: 357 IFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQ 416
           +FF + AG LRPIAIEL+ PP    P  K V+     +T  W+WKLAKAHV ++DAG HQ
Sbjct: 513 VFFYSKAGALRPIAIELSLPPTPSSPGNKFVYTHGHDATTHWIWKLAKAHVCSNDAGVHQ 572

Query: 417 LVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIES 476
           LV+HWLRTH C EPY+IAT+RQLS MHPIY+LL PH RYT+EIN LARQ+L+N  GIIE+
Sbjct: 573 LVNHWLRTHACMEPYIIATHRQLSAMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEA 632

Query: 477 SFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDG 536
            FSPGKY+ME SS AY   WRFD EALP DLI RG+A EDPS P G++L IEDYP+A DG
Sbjct: 633 CFSPGKYAMELSSAAYKSMWRFDMEALPADLIRRGMAEEDPSMPCGVRLVIEDYPYAADG 692

Query: 537 LDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKD 596
           L +W AIK+WV  YV+H+Y + + + SD ELQAWW EI+  GH DK++EPWWP L T +D
Sbjct: 693 LLIWSAIKEWVESYVDHFYSEPNSITSDLELQAWWDEIKNKGHYDKRNEPWWPKLNTKED 752

Query: 597 LIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPEN 656
           L  I+TT++W+ SG HAA+NFGQY +GGY PNRPT  R  I  E+  D  ++ F+  P+ 
Sbjct: 753 LSGILTTMIWIASGQHAAINFGQYPFGGYVPNRPTLMRKLIPQENDPD--YEKFIRNPQY 810

Query: 657 ALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGK--EIEPAWREDPVINAAFEKFRGKLM 714
             L++ P+Q+QATKVMA+ D LSTHSPDEEYLG+   +   W  D  +   F KF  +L 
Sbjct: 811 TFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGELRHLHSHWINDHEVVKLFNKFSARLE 870

Query: 715 ELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVPYSISI 762
           E+E  I+ RN D +L+NRNGAG+ PYELL P S PGVTG+G+P SISI
Sbjct: 871 EIEKTINERNKDIRLKNRNGAGIPPYELLLPTSGPGVTGRGIPNSISI 918

Length = 918
>gnl|CDD|215847 pfam00305, Lipoxygenase, Lipoxygenase Back     alignment and domain information
>gnl|CDD|215148 PLN02264, PLN02264, lipoxygenase Back     alignment and domain information
>gnl|CDD|215193 PLN02337, PLN02337, lipoxygenase Back     alignment and domain information
>gnl|CDD|238849 cd01751, PLAT_LH2, PLAT/ LH2 domain of plant lipoxygenase related proteins Back     alignment and domain information
>gnl|CDD|214608 smart00308, LH2, Lipoxygenase homology 2 (beta barrel) domain Back     alignment and domain information
>gnl|CDD|216521 pfam01477, PLAT, PLAT/LH2 domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 762
PLN02305918 lipoxygenase 100.0
PLN02264919 lipoxygenase 100.0
PLN02337866 lipoxygenase 100.0
PF00305667 Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Li 100.0
cd01751137 PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase re 99.87
smart00308105 LH2 Lipoxygenase homology 2 (beta barrel) domain. 98.89
PF01477113 PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxyg 98.73
cd00113116 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin 98.47
cd02899109 PLAT_SR Scavenger receptor protein. A subfamily of 98.0
cd01753113 PLAT_LOX PLAT domain of 12/15-lipoxygenase. As a u 97.7
cd01756120 PLAT_repeat PLAT/LH2 domain repeats of family of p 97.48
cd01757114 PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 inter 97.46
cd01752120 PLAT_polycystin PLAT/LH2 domain of polycystin-1 li 97.23
cd01754129 PLAT_plant_stress PLAT/LH2 domain of plant-specifi 96.97
>PLN02305 lipoxygenase Back     alignment and domain information 
Probab=100.00  E-value=7.1e-244  Score=2074.87  Aligned_cols=758  Identities=55%  Similarity=1.007  Sum_probs=728.9

Q ss_pred             cEEEEEEecCCCCceeEEEEEecCCCceeeeeEEEeecCCCcEEEeeccccccCCCCCcceEEeecccccCCCCChhhHH
Q 004307            2 QYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKR   81 (762)
Q Consensus         2 ~~~~~f~~~~~fG~pgav~v~n~~~~e~fl~~i~v~~~p~~~~~F~c~sWv~~~~~~~~~riff~n~~~lp~~tp~~l~~   81 (762)
                      +|+++|+||++||+||||+|+|+|++||||++|+|+++|+|.|||+||||||+.++++.+||||+||+|||++||++|++
T Consensus       155 ~~~~~f~~~~~fG~pGA~~v~N~h~~ef~l~~i~l~~~p~g~v~f~cnSWv~~~~~~~~~RiFF~nk~ylP~~tP~~l~~  234 (918)
T PLN02305        155 EYAADFTVPFDFGKPGAVLVTNLHGKEFYLMEIVIHGFDDGPIFFPANTWIHSRKDNPESRIIFRNQAYLPSQTPPGIKD  234 (918)
T ss_pred             EEEEEEeeccccCCcceEEEEeCCCceEEEEEEEEecCCCCeEEEeccCccccCCCCCCCceEecCCCcCcccCCHHHHH
Confidence            69999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCccccccCeeeeccccCCCCCCCCCCccccccCCCCCCCCCcccCCCCCCCCCCCCccCccC---CC
Q 004307           82 YRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREG---NF  158 (762)
Q Consensus        82 ~R~~EL~~~rg~g~g~r~~~driY~y~~yndlG~p~~~~~~~rpvlgg~~~pyprr~rtgr~~~~~~~~~~~~~~---~~  158 (762)
                      +||+||++|||||+||||+||||||||||||||+||++++++||||||.+|||||||||||+|+++||.+|+|..   .+
T Consensus       235 ~Re~eL~~lRGdg~Gerk~~dRiYdYd~YNDLG~Pd~~~~~~RpvLGG~~~PYPRR~RTGR~~t~~Dp~~Esr~~~~~~~  314 (918)
T PLN02305        235 LRREDLLSLRGNGKGERKPHDRIYDYAPYNDLGNPDKDEDLARPVLGGEEWPYPRRCRTGRPPTKKDPLCESRIEKPHPV  314 (918)
T ss_pred             HHHHHHHHhcCCCCCcCCccccccchhhhccCCCCCCCccccCcccCCCCCCCCCcCcCCCCCCCCCCcccccccCCCCc
Confidence            999999999999999999999999999999999999999999999999669999999999999999999999953   47


Q ss_pred             ccCCCCccChhhhcchhhhhHHHHHHhhhhhhhhhccCCCCCCCCHHHHHHHhccCCCCCCccccchhhchhH-HHHHHh
Q 004307          159 YVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLP-RLVKAI  237 (762)
Q Consensus       159 ylP~De~f~~~K~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~di~~ly~~~~~~~~~~~~~~~~~~~~-~~~~~~  237 (762)
                      ||||||+|++.|.++|.+.++|+++|.++|.|+++++.+..+|+||+||++||++|++||......+.+..+| .+.+.+
T Consensus       315 YvPrDE~f~~~K~~~f~~~~lk~~~~~~~p~~~~~~~~~~~~F~~f~~i~~Ly~~g~~l~~~~~~~~~~~p~~~~~~~~i  394 (918)
T PLN02305        315 YVPRDETFEEIKRNTFSAGRLKALLHNLIPSIAAALSSSDIPFTCFSDIDKLYNDGILLKTEEPKDIGLNPFLGNFMKQV  394 (918)
T ss_pred             CCCCCCCcccchhhhHHHHHHHHHHHhhhhHHHHhcCCCCCCCCCHHHHHHHhccCCcCCchhhhhhhcCCchHHHHHHh
Confidence            9999999999999999999999999999999999988778999999999999999999987421122232232 455556


Q ss_pred             hccCCccccccCccccccccccccccHHHHHHHhhCCCccchhcccCCCCCCCCCCCcCCCCCCcccHHHHHHhhCCccc
Q 004307          238 EDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMIS  317 (762)
Q Consensus       238 ~~~~~~~~~~p~P~~~~~~~~~W~~D~~FgrQ~LaG~NP~~I~r~~~~P~~~~ld~~~~g~~~~~vt~~~i~~~l~g~~t  317 (762)
                      .+++|.+||||+|+||++|+++|++|+|||||+|||+||++|+||++||++++|||++||+++|+||++||+..|+| +|
T Consensus       395 ~~~~~~~lkf~~P~vi~~d~~~W~~DeeFaRQ~LaGvNP~~I~rl~efP~~skldp~~yG~~~s~iT~e~ve~~L~G-~T  473 (918)
T PLN02305        395 LSVSERLLKYDIPAVIKRDRFAWLRDNEFARQALAGVNPVNIEILKEFPILSKLDPAVYGPPESALTEELIERELEG-MT  473 (918)
T ss_pred             hhcccccccCCCcceeecccccccChHHHHHHHHcCCCChheeeccccCCccccCccccCCcCCCcCHHHHHhhcCC-Cc
Confidence            78899999999999999999999999999999999999999999999999999999999999999999999999998 99


Q ss_pred             HHHHHhcCcEEEeccccccCchhhhcccCCCccccccceEEeeCCCCceeeEEEEecCCCCCCCCCCceeeeCCCCCCCc
Q 004307          318 VEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQWKQVFLPSWHSTEC  397 (762)
Q Consensus       318 l~~al~~grLFi~Dy~~~~lp~~~~~n~~~g~~~yA~~~Lffl~~~g~L~PiAIqL~~~~~~~~~~~~~VftP~d~~~~~  397 (762)
                      |++||++|||||+||||++|||+.++|.++++++|||+||||++++|+|+||||||+++++++++..++||||.++++++
T Consensus       474 leeAl~~~rLFIlDy~dl~lp~l~~in~l~~~~~YAprtLffL~~dG~L~PlAIqL~~~p~~~~p~~~~VftP~~d~~~~  553 (918)
T PLN02305        474 VEKAIEEKRLFILDYHDMLLPFIEKMNSLPERKAYASRTVFFYSKAGALRPIAIELSLPPTPSSPGNKFVYTHGHDATTH  553 (918)
T ss_pred             HHHHHHcCCEEEEechhhhCcccccccccCCcccccceeEEEECCCCCEeeEEEEeeCCCCCCCCCcceeeCCCCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999877666678899997766788


Q ss_pred             hHHHHHHHHHHhhhhhhhHHHHhhhhhccchhHHHHHHhccCCccCchhhccccchhhcccchHHHHhcccCCCcccccc
Q 004307          398 WLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESS  477 (762)
Q Consensus       398 ~~W~LAK~~v~~aD~~~Hqli~Hll~THlv~Epf~iAt~RqLs~~HPI~kLL~PH~r~Tl~IN~~AR~~LI~~gG~id~~  477 (762)
                      |.|+||||||++||+++||+|+||++||+|||||||||+||||.+|||||||.||||+||+||++||++||++||++|++
T Consensus       554 w~W~LAK~~V~~aD~~~HQlisHlLrTHlv~EpfiIAT~RqLs~~HPI~kLL~PHfr~TL~INalAR~~LIn~gGiie~~  633 (918)
T PLN02305        554 WIWKLAKAHVCSNDAGVHQLVNHWLRTHACMEPYIIATHRQLSAMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEAC  633 (918)
T ss_pred             hHHHHHHHHHHhccHHHHHHHHHHhhHHHHHHHHHHHHhccCCccCCHHHHHHHHHHHHHHHHHHHHHhccCCCCceeee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCChhHHHHHHHHhhccCCCCccCCchHHHhcCCCCCCCCCCCcccccccCCccchhhHHHHHHHHHHHHHhccccccc
Q 004307          478 FSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVNHYYPD  557 (762)
Q Consensus       478 ~~~g~~~~el~~~~y~~~w~f~~~~lP~dL~~RG~~~~D~~~~~g~~~~lp~YpYrdDgl~iW~AI~~fV~~yv~~yY~~  557 (762)
                      |++|+++++|++++|++.|+|++++||+||++|||+++|+++|||+++.|||||||||||+||+||++||++||++||++
T Consensus       634 fspg~~~~elss~aYk~~w~Fd~~~LP~DL~kRGva~~D~~~p~gl~l~ipdYPYrdDGL~IW~AIk~wV~~yV~~YY~~  713 (918)
T PLN02305        634 FSPGKYAMELSSAAYKSMWRFDMEALPADLIRRGMAEEDPSMPCGVRLVIEDYPYAADGLLIWSAIKEWVESYVDHFYSE  713 (918)
T ss_pred             eccchhHHHHHHHHHHhcCcCccccCHHHHHHcCCCccCCCCcccccccCCCCchhhhhHHHHHHHHHHHHHHHHhhCCC
Confidence            99999999999999998899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCHHHHHHHHHHhhccCCCCCCCCCCCCCCChhHHHHHHhhheeccccccccccccccccccccCCCccccCCCC
Q 004307          558 KSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNI  637 (762)
Q Consensus       558 D~~V~~D~ELQaW~~Ei~~~G~~d~~~~p~~p~i~t~~~Lv~~lT~iIf~aS~qHAAVNfgQ~~~~gf~PN~P~~lr~p~  637 (762)
                      |++|++|.|||+||+||+++||+++++.+|||+|+|+++||++||+|||+||+||||||||||+|+||+||+|++||+||
T Consensus       714 D~~V~~D~ELQaW~~Ei~~~Gh~d~kd~~~~p~l~T~~eLi~~lT~IIwtaSaqHAAVNFgQydy~gfvPN~P~~~Rrp~  793 (918)
T PLN02305        714 PNSITSDLELQAWWDEIKNKGHYDKRNEPWWPKLNTKEDLSGILTTMIWIASGQHAAINFGQYPFGGYVPNRPTLMRKLI  793 (918)
T ss_pred             hhhhccCHHHHHHHHHHHhcCCCCCCCCCCCcCCcCHHHHHHHHHhhhhhcchhhhhhhcCCcccccccCCCchhhcCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCchHHHHhhcccHHHHHccCCChHHHHHHHHHHHHhcCCCCCCccccCcCCC--CCCCcHHHHHHHHHHHHHHHH
Q 004307          638 ATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEP--AWREDPVINAAFEKFRGKLME  715 (762)
Q Consensus       638 P~~~kg~~~~~~~~~~~e~~~l~~LP~~~~a~~~m~~~~~LS~~~~de~yLG~~~~~--~~~~d~~~~~a~~~F~~~L~~  715 (762)
                      |++  ++.++++|+.+||+++|++||++.||+.+|+++++||+|++||+|||++.+.  .|+.|+++++|+++|+++|++
T Consensus       794 P~~--~~~~~~~l~~~pe~~~L~tLP~~~qa~~~mav~~iLS~hs~de~yLG~~~~~~~~w~~D~~~~~A~~rF~~~L~e  871 (918)
T PLN02305        794 PQE--NDPDYEKFIRNPQYTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGELRHLHSHWINDHEVVKLFNKFSARLEE  871 (918)
T ss_pred             CCC--CCchHHHhhhChHHHHHHHCCcHHHHHHHHHHHHHhccCCCCcccccCCCCcccccccCHHHHHHHHHHHHHHHH
Confidence            987  6678999999999999999999999999999999999999999999999875  699999999999999999999


Q ss_pred             HHHHHhhhcCCccccccCCCccCCceeecCCCCCCCCcCCCCccccC
Q 004307          716 LEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVPYSISI  762 (762)
Q Consensus       716 ie~~I~~RN~~~~~knr~~~~~~PY~yL~Ps~~~g~t~~~IpnSIsI  762 (762)
                      ||++|++||++++||||+||+.+||+||+|+++||||||||||||||
T Consensus       872 IE~~I~~RN~~~~lkNR~G~~~~PY~lL~P~s~~G~T~rgIPNSISI  918 (918)
T PLN02305        872 IEKTINERNKDIRLKNRNGAGIPPYELLLPTSGPGVTGRGIPNSISI  918 (918)
T ss_pred             HHHHHHHHhCCccccccCCCCCCCccccCCCCCCCCCcCCCCCcccC
Confidence            99999999999999999999999999999999999999999999998

>PLN02264 lipoxygenase Back     alignment and domain information
>PLN02337 lipoxygenase Back     alignment and domain information
>PF00305 Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Lipoxygenases (1 Back     alignment and domain information
>cd01751 PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase related proteins Back     alignment and domain information
>smart00308 LH2 Lipoxygenase homology 2 (beta barrel) domain Back     alignment and domain information
>PF01477 PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxygenases (1 Back     alignment and domain information
>cd00113 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain Back     alignment and domain information
>cd02899 PLAT_SR Scavenger receptor protein Back     alignment and domain information
>cd01753 PLAT_LOX PLAT domain of 12/15-lipoxygenase Back     alignment and domain information
>cd01756 PLAT_repeat PLAT/LH2 domain repeats of family of proteins with unknown function Back     alignment and domain information
>cd01757 PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 interacting protein 1 (Rab6IP1)_like family Back     alignment and domain information
>cd01752 PLAT_polycystin PLAT/LH2 domain of polycystin-1 like proteins Back     alignment and domain information
>cd01754 PLAT_plant_stress PLAT/LH2 domain of plant-specific single domain protein family with unknown function Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query762
2iuk_A864 Crystal Structure Of Soybean Lipoxygenase-D Length 0.0
2iuj_A853 Crystal Structure Of Soybean Lipoxygenase-B Length 0.0
1ik3_A857 Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydrope 0.0
3pzw_A839 Soybean Lipoxygenase-1 - Re-Refinement Length = 839 0.0
2sbl_B839 The Three-Dimensional Structure Of An Arachidonic A 0.0
3bnd_A839 Lipoxygenase-1 (Soybean), I553v Mutant Length = 839 0.0
3bnb_A839 Lipoxygenase-1 (Soybean) I553l Mutant Length = 839 0.0
1fgr_A839 Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant Leng 0.0
1fgq_A839 Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant Leng 0.0
3bne_A839 Lipoxygenase-1 (Soybean) I553a Mutant Length = 839 0.0
1fgm_A839 Lipoxygenase-1 (Soybean) At 100k, N694h Mutant Leng 0.0
1fgt_A839 Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant Leng 0.0
1fgo_A839 Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant Leng 0.0
1y4k_A839 Lipoxygenase-1 (Soybean) At 100k, N694g Mutant Leng 0.0
3bnc_A839 Lipoxygenase-1 (Soybean) I553g Mutant Length = 839 0.0
1rov_A857 Lipoxygenase-3 Treated With Cumene Hydroperoxide Le 0.0
3o8y_A691 Stable-5-Lipoxygenase Length = 691 7e-47
3v98_A691 S663d Stable-5-Lox Length = 691 7e-47
3v92_B691 S663a Stable-5-Lox Length = 691 7e-47
3dy5_A1066 Allene Oxide Synthase 8r-Lipoxygenase From Plexaura 4e-44
3fg1_A696 Crystal Structure Of Delta413-417:gs Lox Length = 6 5e-44
2fnq_A699 Insights From The X-Ray Crystal Structure Of Coral 6e-44
3fg4_A696 Crystal Structure Of Delta413-417:gs I805a Lox Leng 1e-43
3fg3_A696 Crystal Structure Of Delta413-417:gs I805w Lox Leng 3e-43
3vf1_A698 Structure Of A Calcium-Dependent 11r-Lipoxygenase S 2e-41
3rde_A573 Crystal Structure Of The Catalytic Domain Of Porcin 2e-39
1lox_A662 Rabbit Reticulocyte 15-Lipoxygenase Length = 662 5e-38
2p0m_A662 Revised Structure Of Rabbit Reticulocyte 15s-Lipoxy 7e-38
3d3l_A541 The 2.6 A Crystal Structure Of The Lipoxygenase Dom 8e-38
>pdb|2IUK|A Chain A, Crystal Structure Of Soybean Lipoxygenase-D Length = 864 Back     alignment and structure 
Iteration: 1

 Score =  703 bits (1814), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/765 (48%), Positives = 486/765 (63%), Gaps = 20/765 (2%)
Query: 7   FEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFF 65
           FE  + FG  GA  ++N    E +L  + L+ +PN G +   CNSW+++    K+ R+FF
Sbjct: 111 FEWDASFGIPGAFYIKNFMTDEFFLVSVKLEDIPNHGTIEFVCNSWVYNFRSYKKNRIFF 170
Query: 66  TNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARP 125
            N  YLPS TP  L +YR EE  +LRG+G G+RK +DRIYDYDVYNDLG+PD      RP
Sbjct: 171 VNDTYLPSATPAPLLKYRKEEFEVLRGDGTGKRKDFDRIYDYDVYNDLGNPDGGD--PRP 228
Query: 126 VLGGKQ-NPYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLH 184
           +LGG    PYP R RTGR R  TD  SEK  G  YVPRDE F  +K   F    + S+ H
Sbjct: 229 ILGGCSIYPYPLRVRTGRERTRTDPNSEK-PGEVYVPRDENFGHLKSSDFLTYGIKSLSH 287
Query: 185 ALVPSLETAFVDPDLG---FPYFSAIDALFNEGVNLPP--LKQEGFWNTLLPRLVKAIED 239
            ++P  ++A     +    F  F  + +L+  G+ LP   L Q     + LP L +    
Sbjct: 288 DVIPLFKSAIFQLRVTSSEFESFEDVRSLYEGGIKLPTDILSQ----ISPLPALKEIFRT 343
Query: 240 TGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPP 299
            G+N+L F  P      K     DEEF+R+ +AG+NP  IR + E+P KSTLDP +YG  
Sbjct: 344 DGENVLQFPPPHVAKVSKSGVMTDEEFAREVIAGVNPNVIRRLQEFPPKSTLDPTLYGDQ 403
Query: 300 ESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFF 359
            S IT E +E  +GG ++VEEA+  ++LFILDY D F+PY+ ++  L +   Y +RTI F
Sbjct: 404 TSTITKEQLEINMGG-VTVEEALSTQRLFILDYQDAFIPYLTRINSLPTAKAYATRTILF 462
Query: 360 LTPAGTLRPIAIELTRPPMNGKPQWKQ--VFLPSWHSTECWLWKLAKAHVLAHDAGYHQL 417
           L   GTL+P+AIEL++P  +G     +  V LP+    +  +W LAKAHV+ +D+GYHQL
Sbjct: 463 LKDDGTLKPLAIELSKPHPDGDNLGPESIVVLPATEGVDSTIWLLAKAHVIVNDSGYHQL 522
Query: 418 VSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESS 477
           VSHWL TH   EP+ IATNR LSV+HPIY+LL PH+R T+ INGLARQ+L+NADGIIE S
Sbjct: 523 VSHWLNTHAVMEPFAIATNRHLSVLHPIYKLLYPHYRDTININGLARQSLINADGIIEKS 582
Query: 478 FSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGL 537
           F PGKYS+E SS  Y K W F H+ALP DL+ RGLA+EDPSAPHGL+L IEDYP+A DGL
Sbjct: 583 FLPGKYSIEMSSSVY-KNWVFTHQALPADLVKRGLAIEDPSAPHGLRLVIEDYPYAVDGL 641
Query: 538 DLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDL 597
           ++WDAIK WV +YV+ YYP  + V+ D ELQAWW E    GHGD K +PWWP  +T +DL
Sbjct: 642 EIWDAIKTWVHEYVSLYYPTDAAVQQDTELQAWWKEAVEKGHGDLKEKPWWPKKQTTEDL 701
Query: 598 IEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENA 657
           I+  + IVW  S  HAAVNFGQY YGG   NRPT AR  I  E     ++   ++ P+ A
Sbjct: 702 IQSCSIIVWTASALHAAVNFGQYPYGGLILNRPTLARRFIPAE--GTPEYDEMVKNPQKA 759
Query: 658 LLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELE 717
            L T   + +    ++++++LS H+ DE YLG+   P W  D     AF++F  KL  +E
Sbjct: 760 YLRTITPKFETLIDLSVIEILSRHASDEIYLGERETPNWTTDKKALEAFKRFGSKLTGIE 819
Query: 718 GIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVPYSISI 762
           G I+ARN+DP LRNR G   +PY LL   SE G+T KG+P SISI
Sbjct: 820 GKINARNSDPSLRNRTGPVQLPYTLLHRSSEEGLTFKGIPNSISI 864
>pdb|2IUJ|A Chain A, Crystal Structure Of Soybean Lipoxygenase-B Length = 853 Back     alignment and structure
>pdb|1IK3|A Chain A, Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydroperoxy- 9(Z),11(E)-Octadecadienoic Acid Length = 857 Back     alignment and structure
>pdb|3PZW|A Chain A, Soybean Lipoxygenase-1 - Re-Refinement Length = 839 Back     alignment and structure
>pdb|2SBL|B Chain B, The Three-Dimensional Structure Of An Arachidonic Acid 15- Lipoxygenase Length = 839 Back     alignment and structure
>pdb|3BND|A Chain A, Lipoxygenase-1 (Soybean), I553v Mutant Length = 839 Back     alignment and structure
>pdb|3BNB|A Chain A, Lipoxygenase-1 (Soybean) I553l Mutant Length = 839 Back     alignment and structure
>pdb|1FGR|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant Length = 839 Back     alignment and structure
>pdb|1FGQ|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant Length = 839 Back     alignment and structure
>pdb|3BNE|A Chain A, Lipoxygenase-1 (Soybean) I553a Mutant Length = 839 Back     alignment and structure
>pdb|1FGM|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694h Mutant Length = 839 Back     alignment and structure
>pdb|1FGT|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant Length = 839 Back     alignment and structure
>pdb|1FGO|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant Length = 839 Back     alignment and structure
>pdb|1Y4K|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694g Mutant Length = 839 Back     alignment and structure
>pdb|3BNC|A Chain A, Lipoxygenase-1 (Soybean) I553g Mutant Length = 839 Back     alignment and structure
>pdb|1ROV|A Chain A, Lipoxygenase-3 Treated With Cumene Hydroperoxide Length = 857 Back     alignment and structure
>pdb|3O8Y|A Chain A, Stable-5-Lipoxygenase Length = 691 Back     alignment and structure
>pdb|3V98|A Chain A, S663d Stable-5-Lox Length = 691 Back     alignment and structure
>pdb|3V92|B Chain B, S663a Stable-5-Lox Length = 691 Back     alignment and structure
>pdb|3DY5|A Chain A, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura Homomalla Length = 1066 Back     alignment and structure
>pdb|3FG1|A Chain A, Crystal Structure Of Delta413-417:gs Lox Length = 696 Back     alignment and structure
>pdb|2FNQ|A Chain A, Insights From The X-Ray Crystal Structure Of Coral 8r- Lipoxygenase: Calcium Activation Via A C2-Like Domain And A Structural Basis Of Product Chirality Length = 699 Back     alignment and structure
>pdb|3FG4|A Chain A, Crystal Structure Of Delta413-417:gs I805a Lox Length = 696 Back     alignment and structure
>pdb|3FG3|A Chain A, Crystal Structure Of Delta413-417:gs I805w Lox Length = 696 Back     alignment and structure
>pdb|3VF1|A Chain A, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests A Mechanism For Ca-Regulation Length = 698 Back     alignment and structure
>pdb|3RDE|A Chain A, Crystal Structure Of The Catalytic Domain Of Porcine Leukocyte 12- Lipoxygenase Length = 573 Back     alignment and structure
>pdb|1LOX|A Chain A, Rabbit Reticulocyte 15-Lipoxygenase Length = 662 Back     alignment and structure
>pdb|2P0M|A Chain A, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase Length = 662 Back     alignment and structure
>pdb|3D3L|A Chain A, The 2.6 A Crystal Structure Of The Lipoxygenase Domain Of Human Arachidonate 12-Lipoxygenase, 12s-Type (Casp Target) Length = 541 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query762
1f8n_A839 Lipoxygenase-1; dioxygenase, metalloprotein, fatty 0.0
2iuk_A864 SEED lipoxygenase; iron, dioxygenase, metal-bindin 0.0
2iuj_A853 Lipoxygenase L-5; dioxygenase, metal-binding, oxid 0.0
3v98_A691 Arachidonate 5-lipoxygenase; dioxygenase, oxidored 1e-175
3dy5_A1066 Allene oxide synthase-lipoxygenase protein; fusion 1e-173
1lox_A662 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot 1e-168
3rde_A573 Arachidonate 12-lipoxygenase, 12S-type; C-terminal 1e-168
3fg1_A696 Allene oxide synthase-lipoxygenase protein; arichi 1e-166
3d3l_A541 Arachidonate 12-lipoxygenase, 12S-type; ALOX12, ir 1e-159
3vf1_A698 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-lik 1e-156
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-11
>1f8n_A Lipoxygenase-1; dioxygenase, metalloprotein, fatty acids, oxidoreductase; 1.40A {Glycine max} SCOP: a.119.1.1 b.12.1.1 PDB: 1yge_A 2sbl_B 3pzw_A 1fgq_A 1fgr_A 3bnd_A 1fgt_A 1fgm_A 3bnb_A 1fgo_A 1y4k_A 3bne_A 3bnc_A 1ik3_A* 1hu9_A* 1jnq_A* 1lnh_A 1n8q_A* 1no3_A* 1rrh_A ... Length = 839 Back     alignment and structure
 Score =  888 bits (2295), Expect = 0.0
 Identities = 354/769 (46%), Positives = 474/769 (61%), Gaps = 15/769 (1%)

Query: 1   MQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNK 59
             +   FE     G  GA  ++N    E +LK + L+ + N G +   CNSW+++    K
Sbjct: 79  SAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYK 138

Query: 60  QKRVFFTNKLYLPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKK 119
             R+FF N  Y+PS+TP  L  YR EEL  LRGNG GERK YDRIYDYDVYNDLG+PDK 
Sbjct: 139 SVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKS 198

Query: 120 PELARPVLGG-KQNPYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKT 178
            +LARPVLGG    PYPRR RTGR    TD  +EK+   FYVPRDE    +K        
Sbjct: 199 EKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDALEIG 258

Query: 179 VYSVLHALVPSLETAFV--DPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKA 236
             S+   + P+ E+AF      + F  F  +  L+  G+ LP  +        LP + + 
Sbjct: 259 TKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP--RDVISTIIPLPVIKEL 316

Query: 237 IEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIY 296
               G +IL F  P  +   +  W  DEEF+R+ +AG+NP  IR + E+P KS LDP IY
Sbjct: 317 YRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIY 376

Query: 297 GPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRT 356
           G   S IT + ++ +     +++EA+  ++LF+LDYHD+F+PYV ++ QL S   Y +RT
Sbjct: 377 GDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRT 433

Query: 357 IFFLTPAGTLRPIAIELTRPPMNG--KPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGY 414
           I FL   GTL+P+AIEL+ P   G       QV LP+    E  +W LAKA+V+ +D+ Y
Sbjct: 434 ILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCY 493

Query: 415 HQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGII 474
           HQL+SHWL TH   EP+VIAT+R LSV+HPIY+LL PH+R  M IN LARQ+L+NA+GII
Sbjct: 494 HQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGII 553

Query: 475 ESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFAN 534
           E++F P KYS+E SS  Y K W F  +ALP DLI RG+A++DPS PHG++L IEDYP+A 
Sbjct: 554 ETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAA 612

Query: 535 DGLDLWDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTP 594
           DGL++W AIK WV +YV  YY     V++D ELQ WW E    GHGD K +PWWP L+T 
Sbjct: 613 DGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTL 672

Query: 595 KDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKP 654
           +DL+E+   I+W+ S  HAAVNFGQY YGG   NRPT +R  +  +     +++  +   
Sbjct: 673 EDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKG--TPEYEEMINNH 730

Query: 655 ENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLM 714
           E A L T  S++     ++++++LSTH+ DE YLG+   P W  D     AF+KF  KL 
Sbjct: 731 EKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLK 790

Query: 715 ELEGIIDARNADPKLR-NRNGAGMVPYELLKPFSEPGVTGKGVPYSISI 762
           E+E  +  RN DP L+ NR G   +PY LL P SE G+T +G+P SISI
Sbjct: 791 EIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>2iuk_A SEED lipoxygenase; iron, dioxygenase, metal-binding, oxidoreductase, oxylipin biosynthesis, soybean lipoxygenase-D, fatty acid biosynthesis; 2.4A {Glycine max} Length = 864 Back     alignment and structure
>2iuj_A Lipoxygenase L-5; dioxygenase, metal-binding, oxidoreductase, soybean lipoxygenase-B, fatty acid biosynthesis, lipid synthesis; 2.4A {Glycine max} Length = 853 Back     alignment and structure
>3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B Length = 691 Back     alignment and structure
>3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla} Length = 1066 Back     alignment and structure
>1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A* Length = 662 Back     alignment and structure
>3rde_A Arachidonate 12-lipoxygenase, 12S-type; C-terminal domain, protein-inhibitor complex, oxapentadeca-4-YNE)phenylpropanoic acid; HET: OYP; 1.89A {Sus scrofa} Length = 573 Back     alignment and structure
>3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A Length = 696 Back     alignment and structure
>3d3l_A Arachidonate 12-lipoxygenase, 12S-type; ALOX12, iron-binding protein, 12-LOX, platelet-type lipoxygenase 12, structural genomics; 2.60A {Homo sapiens} Length = 541 Back     alignment and structure
>3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa} Length = 698 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query762
2iuk_A864 SEED lipoxygenase; iron, dioxygenase, metal-bindin 100.0
2iuj_A853 Lipoxygenase L-5; dioxygenase, metal-binding, oxid 100.0
1f8n_A839 Lipoxygenase-1; dioxygenase, metalloprotein, fatty 100.0
1lox_A662 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot 100.0
3v98_A691 Arachidonate 5-lipoxygenase; dioxygenase, oxidored 100.0
3fg1_A696 Allene oxide synthase-lipoxygenase protein; arichi 100.0
3vf1_A698 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-lik 100.0
3dy5_A1066 Allene oxide synthase-lipoxygenase protein; fusion 100.0
3rde_A573 Arachidonate 12-lipoxygenase, 12S-type; C-terminal 100.0
3d3l_A541 Arachidonate 12-lipoxygenase, 12S-type; ALOX12, ir 100.0
2wxu_A370 Phospholipase C; cytolysis, hydrolase, hemolysis, 97.83
1olp_A370 Alpha-toxin; zinc phospholipase C, GAS gangrene de 97.8
3cwz_B384 RAB6IP1, RAB6-interacting protein 1; RAB small GTP 95.83
>2iuk_A SEED lipoxygenase; iron, dioxygenase, metal-binding, oxidoreductase, oxylipin biosynthesis, soybean lipoxygenase-D, fatty acid biosynthesis; 2.4A {Glycine max} Back     alignment and structure
Probab=100.00  E-value=1.6e-234  Score=2019.01  Aligned_cols=750  Identities=49%  Similarity=0.886  Sum_probs=720.9

Q ss_pred             cEEEEEEecCCCCceeEEEEEecCCCceeeeeEEEeecCC-CcEEEeeccccccCCCCCcceEEeecccccCCCCChhhH
Q 004307            2 QYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLK   80 (762)
Q Consensus         2 ~~~~~f~~~~~fG~pgav~v~n~~~~e~fl~~i~v~~~p~-~~~~F~c~sWv~~~~~~~~~riff~n~~~lp~~tp~~l~   80 (762)
                      +|+++|.||++||+||||+|+|+|++||||++|+|+++|+ |.|||+||||||+.++++.+||||+||+|||++||++|+
T Consensus       106 ~~~~~f~~~~~fg~pgA~~v~n~~~~e~~l~~~~l~~~~~~~~~~f~cnswv~~~~~~~~~RifF~n~~ylp~~tp~~l~  185 (864)
T 2iuk_A          106 AFSIFFEWDASFGIPGAFYIKNFMTDEFFLVSVKLEDIPNHGTIEFVCNSWVYNFRSYKKNRIFFVNDTYLPSATPAPLL  185 (864)
T ss_dssp             EEEEEECCCSTTCCEEEEEEEECSSSCEEEEEEEEECCSSSCCEEEEEEEEECBGGGSSSCEEEEBSCCCCTTTSCGGGH
T ss_pred             EEEEEEEeeccCCCcceEEEEeCCCCceEEEEEEEecCCCCCcEEEecCccccCCCCCCCCceeccCCCcCcccCcHHHH
Confidence            6999999999999999999999999999999999999996 899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCccccccCeeeeccccCCCCCCCCCCccccccCCC-CCCCCCcccCCCCCCCCCCCCccCccCCCc
Q 004307           81 RYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGG-KQNPYPRRCRTGRPRCDTDQFSEKREGNFY  159 (762)
Q Consensus        81 ~~R~~EL~~~rg~g~g~r~~~driY~y~~yndlG~p~~~~~~~rpvlgg-~~~pyprr~rtgr~~~~~~~~~~~~~~~~y  159 (762)
                      ++|++||++|||||+||||+||||||||||||||+||++++  |||||| ++|||||||||||+|+++||.+|+|.. +|
T Consensus       186 ~~R~~el~~lrg~g~g~rk~~driydyd~yndlg~pd~~~~--rpvlggs~~~pyPrR~rtgr~~~~~dp~~e~~~~-~y  262 (864)
T 2iuk_A          186 KYRKEEFEVLRGDGTGKRKDFDRIYDYDVYNDLGNPDGGDP--RPILGGCSIYPYPLRVRTGRERTRTDPNSEKPGE-VY  262 (864)
T ss_dssp             HHHHHHHHHHHCCSCSCCCTTCCCCCEECBCCSCBGGGTBC--CCCBSSSSSSCCCCEECCCCCBCSSCTTSBCCCC-CC
T ss_pred             HHHHHHHHHhcCCCCCcccccccchhhhhhhcCCCcccCCC--CcccCCCCCCCCCccccCCCCCCCCCCCcccccc-CC
Confidence            99999999999999999999999999999999999999987  999999 999999999999999999999999965 99


Q ss_pred             cCCCCccChhhhcchhhhhHHHHHHhhhhhhhhhcc--C-CCCCCCCHHHHHHHhccCCCCCCccccchhhch--hHHHH
Q 004307          160 VPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFV--D-PDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTL--LPRLV  234 (762)
Q Consensus       160 lP~De~f~~~K~~~f~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~s~~di~~ly~~~~~~~~~~~~~~~~~~--~~~~~  234 (762)
                      |||||+|++.|.++|..++++++++.++|.|+++++  + +..+|+||+||++||++|++||..    ..++.  ++.+.
T Consensus       263 vPrDe~F~~~K~~~f~~~~~k~~~~~~~p~l~~~~~~~~~~~~~f~sf~di~~ly~~g~~l~~~----~~~~~~p~~~~~  338 (864)
T 2iuk_A          263 VPRDENFGHLKSSDFLTYGIKSLSHDVIPLFKSAIFQLRVTSSEFESFEDVRSLYEGGIKLPTD----ILSQISPLPALK  338 (864)
T ss_dssp             CCGGGSCCCSSGGGCHHHHHHHHHHTTHHHHHHHHHSSCSSCSSCCSHHHHHTTTSSCEECCHH----HHHHHSSCTTTT
T ss_pred             CCCCcccCcchHHHHHHHHHHHHHHHHHHHHHHHhcccccCcCCCCCHHHHHHHHhccccCchh----hhcccCcHHHHH
Confidence            999999999999999999999999999999999874  2 568999999999999999888762    12222  22344


Q ss_pred             HHhhccCCccccccCccccccccccccccHHHHHHHhhCCCccchhcccCCCCCCCCCCCcCCCCCCcccHHHHHHhhCC
Q 004307          235 KAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGG  314 (762)
Q Consensus       235 ~~~~~~~~~~~~~p~P~~~~~~~~~W~~D~~FgrQ~LaG~NP~~I~r~~~~P~~~~ld~~~~g~~~~~vt~~~i~~~l~g  314 (762)
                      +.+.+.+|+++|||+|++++.++++|++|++||||+|||+||++|++|++||++|+|||++||+++|+||++||+..|+|
T Consensus       339 ~~~~~~~e~~lk~p~P~vi~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~s~ldp~~yg~~~s~it~e~i~~~l~g  418 (864)
T 2iuk_A          339 EIFRTDGENVLQFPPPHVAKVSKSGVMTDEEFAREVIAGVNPNVIRRLQEFPPKSTLDPTLYGDQTSTITKEQLEINMGG  418 (864)
T ss_dssp             TTCBCTTSSEEBCCCCSSCSCSSSSSSCHHHHHHHHHHSSSCSCCEECSSSSCCCCSCHHHHCCCCCCCCHHHHGGGTTT
T ss_pred             HHhhccccchhcCCCcceecccchhhhchHHHHHHHhcCCCchhhhhhhccCCcccCChhhcCCcccccCHHHHhhccCC
Confidence            45567789999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             cccHHHHHhcCcEEEeccccccCchhhhcccCCCccccccceEEeeCCCCceeeEEEEecCCCCCCCC--CCceeeeCCC
Q 004307          315 MISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKP--QWKQVFLPSW  392 (762)
Q Consensus       315 ~~tl~~al~~grLFi~Dy~~~~lp~~~~~n~~~g~~~yA~~~Lffl~~~g~L~PiAIqL~~~~~~~~~--~~~~VftP~d  392 (762)
                       +||++||++|||||+||||++|||+.++|.++++++|||+||||++++|+|+||||||+++++++++  +.++||||+|
T Consensus       419 -~tl~eal~~grLFi~Dy~d~~lp~l~~in~~~~~~~YAp~~Lffl~~dG~L~PlAIqLs~p~~~~~~~~~~~~VftP~d  497 (864)
T 2iuk_A          419 -VTVEEALSTQRLFILDYQDAFIPYLTRINSLPTAKAYATRTILFLKDDGTLKPLAIELSKPHPDGDNLGPESIVVLPAT  497 (864)
T ss_dssp             -CCHHHHHHTTCEEEEECHHHHGGGHHHHHTSTTCCCCEEEEEEEECTTSCEEEEEEEEEECCSSSSSSCCEEEEECCCS
T ss_pred             -CcHHHHHhcCCEEEecchhhhccchhhcccCCCceeecceEEEEEcCCCCEeEEEEEeeCCCCCccccCCCCCeECCCC
Confidence             9999999999999999999889999999999999999999999999999999999999998765432  5789999998


Q ss_pred             CCCCchHHHHHHHHHHhhhhhhhHHHHhhhhhccchhHHHHHHhccCCccCchhhccccchhhcccchHHHHhcccCCCc
Q 004307          393 HSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADG  472 (762)
Q Consensus       393 ~~~~~~~W~LAK~~v~~aD~~~Hqli~Hll~THlv~Epf~iAt~RqLs~~HPI~kLL~PH~r~Tl~IN~~AR~~LI~~gG  472 (762)
                      +++++|.|+|||+||++||+++||+++||++||++||||+|||+||||.+|||||||.||||+||+||++||+.||+++|
T Consensus       498 d~~~~~~W~LAK~~v~~aD~~~HqlisHll~THlv~Epf~IAt~RqLs~~HPI~kLL~PHfr~Tl~IN~~AR~~LI~~gG  577 (864)
T 2iuk_A          498 EGVDSTIWLLAKAHVIVNDSGYHQLVSHWLNTHAVMEPFAIATNRHLSVLHPIYKLLYPHYRDTININGLARQSLINADG  577 (864)
T ss_dssp             SSSHHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHHHHHHHHHHSCTTCHHHHHHGGGGTTHHHHHHHHHHHTSSTTS
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhccCCccCchHHhhHHHHHHHHHHHHHHHHhccCCCC
Confidence            76678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCChhHHHHHHHHhhccCCCCccCCchHHHhcCCCCCCCCCCCcccccccCCccchhhHHHHHHHHHHHHHhcc
Q 004307          473 IIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIKQWVTDYVN  552 (762)
Q Consensus       473 ~id~~~~~g~~~~el~~~~y~~~w~f~~~~lP~dL~~RG~~~~D~~~~~g~~~~lp~YpYrdDgl~iW~AI~~fV~~yv~  552 (762)
                      ++|++|++|+++++|++++|++ |+|++++||+||++|||+++|+++|||+++.||+||||+|||+||+||++||++||+
T Consensus       578 iie~~~~~G~~~~elss~ayk~-w~f~~~~LP~DL~~RGva~~D~~~p~gl~l~ipdYpYadDGL~iW~AIk~~V~~yV~  656 (864)
T 2iuk_A          578 IIEKSFLPGKYSIEMSSSVYKN-WVFTHQALPADLVKRGLAIEDPSAPHGLRLVIEDYPYAVDGLEIWDAIKTWVHEYVS  656 (864)
T ss_dssp             HHHHHSTTGGGHHHHHHHHHTT-CCGGGSSHHHHHHHTTSEEECSSSTTSEEESSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceeeeccCchhHHHHHHHHHcc-CCCccccCcHHHHhcCCCCCCccccccccccCCCCCccccHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999997 999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccCCHHHHHHHHHHhhccCCCCCCCCCCCCCCChhHHHHHHhhheeccccccccccccccccccccCCCccc
Q 004307          553 HYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGGYFPNRPTT  632 (762)
Q Consensus       553 ~yY~~D~~V~~D~ELQaW~~Ei~~~G~~d~~~~p~~p~i~t~~~Lv~~lT~iIf~aS~qHAAVNfgQ~~~~gf~PN~P~~  632 (762)
                      +||++|++|++|.|||+||+||+++||+++++.+|||+|+|+++||++||+|||+||+||||||||||+|+||+||+|++
T Consensus       657 ~YY~sD~~V~~D~ELQaW~~Ei~~~Gh~d~kd~~~~P~l~T~~eLi~~lT~IIf~aSaqHAAVNFgQydy~gfvPN~P~~  736 (864)
T 2iuk_A          657 LYYPTDAAVQQDTELQAWWKEAVEKGHGDLKEKPWWPKKQTTEDLIQSCSIIVWTASALHAAVNFGQYPYGGLILNRPTL  736 (864)
T ss_dssp             HHCCSHHHHHHCHHHHHHHHHHHHTTTGGGTTCTTCCCSSSHHHHHHHHHHHHHHHTHHHHHHHTTHHHHHTSTTTSCCC
T ss_pred             HHcCCchhhcCCHHHHHHHHHHHhcCCCCCCCCCCCCCcCCHHHHHHHhheeeecccchhhhhccccchhhcccCCCChh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCCchHHHHhhcccHHHHHccCCChHHHHHHHHHHHHhcCCCCCCccccCcCCCCCCCcHHHHHHHHHHHHH
Q 004307          633 ARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGK  712 (762)
Q Consensus       633 lr~p~P~~~kg~~~~~~~~~~~e~~~l~~LP~~~~a~~~m~~~~~LS~~~~de~yLG~~~~~~~~~d~~~~~a~~~F~~~  712 (762)
                      ||+|||+  ||..++++|+.+||+++|++||++.||+.+|+++++||+|++||+|||+|+++.|++|+++++|+++|+++
T Consensus       737 ~r~p~P~--~G~~~~~~l~~~pe~~~L~tLP~~~qa~~~m~l~~lLS~h~~de~yLG~~~~~~~~~d~~~~~a~~~F~~~  814 (864)
T 2iuk_A          737 ARRFIPA--EGTPEYDEMVKNPQKAYLRTITPKFETLIDLSVIEILSRHASDEIYLGERETPNWTTDKKALEAFKRFGSK  814 (864)
T ss_dssp             CCSCCCC--TTSHHHHHHHHCHHHHHHTTSCCHHHHHHHHHHHHHHTCCCSSCCBTTCCSCTTSCSCHHHHHHHHHHHHH
T ss_pred             hcCCCCC--CCchhHhhhhhChHHHHHHhCCCHHHHHHHHHHHHHHhcCCCCcccccccCccccccCHHHHHHHHHHHHH
Confidence            9999995  49999999999999999999999999999999999999999999999999988999999999999999999


Q ss_pred             HHHHHHHHhhhcCCccccccCCCccCCceeecCCCCCCCCcCCCCccccC
Q 004307          713 LMELEGIIDARNADPKLRNRNGAGMVPYELLKPFSEPGVTGKGVPYSISI  762 (762)
Q Consensus       713 L~~ie~~I~~RN~~~~~knr~~~~~~PY~yL~Ps~~~g~t~~~IpnSIsI  762 (762)
                      |++||++|++||++++||||+|++++||+||+|+++||||||||||||||
T Consensus       815 L~~Ie~~I~~RN~~~~lknR~g~~~lPY~yL~P~s~~g~t~~~IPNSIsI  864 (864)
T 2iuk_A          815 LTGIEGKINARNSDPSLRNRTGPVQLPYTLLHRSSEEGLTFKGIPNSISI  864 (864)
T ss_dssp             HHHHHHHHHHHSSCTTCGGGTGGGTCCCCTTCSCCCSSSCSCCCBSSCCC
T ss_pred             HHHHHHHHHHHhcCchhhccCCCCCCCceeeCCCCCCCcccCCCCCcccC
Confidence            99999999999999999999999999999999999999999999999998
>2iuj_A Lipoxygenase L-5; dioxygenase, metal-binding, oxidoreductase, soybean lipoxygenase-B, fatty acid biosynthesis, lipid synthesis; 2.4A {Glycine max} Back     alignment and structure
>1f8n_A Lipoxygenase-1; dioxygenase, metalloprotein, fatty acids, oxidoreductase; 1.40A {Glycine max} SCOP: a.119.1.1 b.12.1.1 PDB: 1yge_A 2sbl_B 3pzw_A 1fgq_A 1fgr_A 3bnd_A 1fgt_A 1fgm_A 3bnb_A 1fgo_A 1y4k_A 3bne_A 3bnc_A 1ik3_A* 1hu9_A* 1jnq_A* 1lnh_A 1n8q_A* 1no3_A* 1rrh_A ... Back     alignment and structure
>1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A* Back     alignment and structure
>3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B Back     alignment and structure
>3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A Back     alignment and structure
>3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa} Back     alignment and structure
>3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla} Back     alignment and structure
>3rde_A Arachidonate 12-lipoxygenase, 12S-type; C-terminal domain, protein-inhibitor complex, oxapentadeca-4-YNE)phenylpropanoic acid; HET: OYP; 1.89A {Sus scrofa} Back     alignment and structure
>3d3l_A Arachidonate 12-lipoxygenase, 12S-type; ALOX12, iron-binding protein, 12-LOX, platelet-type lipoxygenase 12, structural genomics; 2.60A {Homo sapiens} Back     alignment and structure
>2wxu_A Phospholipase C; cytolysis, hydrolase, hemolysis, membrane binding, virulence gangrene determinant, C2 domain; 1.80A {Clostridium perfringens} PDB: 2wy6_A 2wxt_A 1qm6_A 1qmd_A 1ca1_A 1gyg_A 1kho_A Back     alignment and structure
>1olp_A Alpha-toxin; zinc phospholipase C, GAS gangrene determinant, membrane binding, calcium binding, hydrolase; 2.5A {Clostridium absonum} SCOP: a.124.1.1 b.12.1.3 Back     alignment and structure
>3cwz_B RAB6IP1, RAB6-interacting protein 1; RAB small GTPase, RAB-binding domain, guanosine 5' triphosphate, RUN, RPIP8, UNC-14, nesca PLAT; HET: GTP; 3.20A {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 762
d3bnea1690 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal dom 0.0
d2p0ma1551 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Ory 0.0
d3bnea2143 b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Gl 3e-30
>d3bnea1 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal domain {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Length = 690 Back     information, alignment and structure

class: All alpha proteins
fold: Lipoxigenase
superfamily: Lipoxigenase
family: Plant lipoxigenases
domain: Lipoxigenase, C-terminal domain
species: Soybean (Glycine max), isozyme L1 [TaxId: 3847]

 Score =  924 bits (2389), Expect = 0.0
 Identities = 331/699 (47%), Positives = 440/699 (62%), Gaps = 16/699 (2%)

Query: 71  LPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGK 130
           +PS+TP  L  YR EEL  LRGNG GERK YDRIYDYDVYNDLG+PDK  +LARPVLGG 
Sbjct: 1   VPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGS 60

Query: 131 QN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPS 189
              PYPRR RTGR    TD  +EK+   FYVPRDE    +K          S+   + P+
Sbjct: 61  STFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPA 120

Query: 190 LETAFV--DPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTL-LPRLVKAIEDTGDNILL 246
            E+AF      + F  F  +  L+  G+ LP   ++     + LP + +     G +IL 
Sbjct: 121 FESAFDLKSTPIEFHSFQDVHDLYEGGIKLP---RDVISTIIPLPVIKELYRTDGQHILK 177

Query: 247 FETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTE 306
           F  P  +   +  W  DEEF+R+ +AG+NP  IR + E+P KS LDP IYG   S IT +
Sbjct: 178 FPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITAD 237

Query: 307 LIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTL 366
            ++ +     +++EA+  ++LF+LDYHD+F+PYV ++ QL S   Y +RTI FL   GTL
Sbjct: 238 SLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTL 294

Query: 367 RPIAIELTRPPMNG--KPQWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRT 424
           +P+AIEL+ P   G       QV LP+    E  +W LAKA+V+ +D+ YHQL+SHWL T
Sbjct: 295 KPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNT 354

Query: 425 HCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLARQALVNADGIIESSFSPGKYS 484
           H   EP+VIAT+R LSV+HPIY+LL PH+R  M IN LARQ+L+NA+GI E++F P KYS
Sbjct: 355 HAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIAETTFLPSKYS 414

Query: 485 MEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIK 544
           +E SS  Y K W F  +ALP DLI RG+A++DPS PHG++L IEDYP+A DGL++W AIK
Sbjct: 415 VEMSSAVY-KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIK 473

Query: 545 QWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTI 604
            WV +YV  YY     V++D ELQ WW E    GHGD K +PWWP L+T +DL+E+   I
Sbjct: 474 TWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLII 533

Query: 605 VWVTSGHHAAVNFGQYTYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPS 664
           +W+ S  HAAVNFGQY YGG   NRPT +R  +        +++  +   E A L T  S
Sbjct: 534 IWIASALHAAVNFGQYPYGGLIMNRPTASRRLLPE--KGTPEYEEMINNHEKAYLRTITS 591

Query: 665 QIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARN 724
           ++     ++++++LSTH+ DE YLG+   P W  D     AF+KF  KL E+E  +  RN
Sbjct: 592 KLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRN 651

Query: 725 ADPKLR-NRNGAGMVPYELLKPFSEPGVTGKGVPYSISI 762
            DP L+ NR G   +PY LL P SE G+T +G+P SISI
Sbjct: 652 NDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 690
>d2p0ma1 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 551 Back     information, alignment and structure
>d3bnea2 b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Length = 143 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query762
d3bnea1690 Lipoxigenase, C-terminal domain {Soybean (Glycine 100.0
d2p0ma1551 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [T 100.0
d3bnea2143 Plant lipoxigenase {Soybean (Glycine max), isozyme 99.9
d2p0ma2111 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [T 97.64
d1olpa2121 Alpha-toxin, C-terminal domain {Clostridium absonu 96.54
d1ca1a2121 Alpha-toxin, C-terminal domain {Clostridium perfri 96.44
d1rp1a1113 Pancreatic lipase, C-terminal domain {Dog (Canis f 91.28
d1bu8a1114 Pancreatic lipase, C-terminal domain {Rat (Rattus 89.47
d1gpla1112 Pancreatic lipase, C-terminal domain {Guinea pig ( 80.24
>d3bnea1 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal domain {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Lipoxigenase
superfamily: Lipoxigenase
family: Plant lipoxigenases
domain: Lipoxigenase, C-terminal domain
species: Soybean (Glycine max), isozyme L1 [TaxId: 3847]

Probab=100.00  E-value=2.1e-209  Score=1786.89  Aligned_cols=683  Identities=48%  Similarity=0.873  Sum_probs=656.4

Q ss_pred             cCCCCChhhHHHHHHHHHHHhcCCCccccccCeeeeccccCCCCCCCCCCccccccCCC-CCCCCCcccCCCCCCCCCCC
Q 004307           71 LPSQTPDGLKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGG-KQNPYPRRCRTGRPRCDTDQ  149 (762)
Q Consensus        71 lp~~tp~~l~~~R~~EL~~~rg~g~g~r~~~driY~y~~yndlG~p~~~~~~~rpvlgg-~~~pyprr~rtgr~~~~~~~  149 (762)
                      ||++||++|+++||+||++|||||+||||+||||||||||||||+||++++++|||||| ++|||||||||||+|+++||
T Consensus         1 lp~~tp~~l~~~r~~el~~lrg~g~g~~~~~driydy~~yndlg~pd~~~~~~rp~lgg~~~~pyprr~rtgr~~~~~dp   80 (690)
T d3bnea1           1 VPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDP   80 (690)
T ss_dssp             CGGGSCGGGHHHHHHHHHHHHCCSCSCCCTTCCCCCEECBCSSCCTTTCGGGCCCCBSSSSSSCCCCEECCCCCBCSSCT
T ss_pred             CCccccHHHHHHHHHHHHHhCCCCCCCCCcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Confidence            79999999999999999999999999999999999999999999999999999999999 78999999999999999999


Q ss_pred             CccCccCCCccCCCCccChhhhcchhhhhHHHHHHhhhhhhhhhcc--CCCCCCCCHHHHHHHhccCCCCCCccccchhh
Q 004307          150 FSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFV--DPDLGFPYFSAIDALFNEGVNLPPLKQEGFWN  227 (762)
Q Consensus       150 ~~~~~~~~~ylP~De~f~~~K~~~f~~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~~di~~ly~~~~~~~~~~~~~~~~  227 (762)
                      .+|+|...+||||||+|++.|.++|.+.++|++++.++|.|+++++  ++..+|+||+||++||++|+++|.+.   ..+
T Consensus        81 ~~e~r~~~~yvPrde~f~~~k~~~f~~~~~~~~~~~~~p~~~~~~~~~~~~~~f~~f~~i~~ly~~g~~~~~~~---~~~  157 (690)
T d3bnea1          81 NTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDV---IST  157 (690)
T ss_dssp             TSBCCCSSCCCCGGGSCCCSSGGGCHHHHHHHHHHTHHHHHHHHHHTTSSCSSCCSHHHHHGGGTTCEECCHHH---HHH
T ss_pred             CcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhccccCchhh---hhh
Confidence            9999999999999999999999999999999999999999998864  35679999999999999999888542   111


Q ss_pred             ch-hHHHHHHhhccCCccccccCccccccccccccccHHHHHHHhhCCCccchhcccCCCCCCCCCCCcCCCCCCcccHH
Q 004307          228 TL-LPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTE  306 (762)
Q Consensus       228 ~~-~~~~~~~~~~~~~~~~~~p~P~~~~~~~~~W~~D~~FgrQ~LaG~NP~~I~r~~~~P~~~~ld~~~~g~~~~~vt~~  306 (762)
                      .. ++.+.+.+.++++.++|||+|+|+++++++|++|++||||+|||+||++|+||+++|++++||++.||++.++||++
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~W~~D~eFarQ~LaG~NP~~Irr~~e~P~~~~l~~~~~g~~~s~it~~  237 (690)
T d3bnea1         158 IIPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITAD  237 (690)
T ss_dssp             HTTSTTGGGGCEECSSSEEECCCCGGGSSCSSGGGSHHHHHHHHHHSSSTTCCEECCSSSCCCCSCHHHHCCCCCCCCGG
T ss_pred             cccHHHHHHHhhccccceeecCCchhhhccccccccHHHHHHHHhcCCCchheeeccccCCcCCCCHHHhCchhhhhhHh
Confidence            11 44577788889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhCCcccHHHHHhcCcEEEeccccccCchhhhcccCCCccccccceEEeeCCCCceeeEEEEecCCCCCCC--CCC
Q 004307          307 LIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGK--PQW  384 (762)
Q Consensus       307 ~i~~~l~g~~tl~~al~~grLFi~Dy~~~~lp~~~~~n~~~g~~~yA~~~Lffl~~~g~L~PiAIqL~~~~~~~~--~~~  384 (762)
                      +++  ++| +||++||++|||||+|||++++|++.++|...+++.|||+||||++++|+|+||||||++++..++  +..
T Consensus       238 ~i~--l~G-~Tl~~Al~~grLFi~Dy~dl~~~~~~~i~~~~~~~~~A~~~Lffl~~dG~L~PiAIqL~~~~~~~~~~~~~  314 (690)
T d3bnea1         238 SLD--LDG-YTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAV  314 (690)
T ss_dssp             GCC--CTT-CCHHHHHHTTCEEEEECHHHHHHHHHHHHTSTTCCCCEEEEEEEECTTSCEEEEEEEEECCCCTTCCCCCC
T ss_pred             hhc--cCc-cHHHHHHHcCCEEEEechhhhccccccccCcCCceeecchhheeECCCCCcccEEEEecCCCCCcccCCCC
Confidence            884  677 999999999999999999988999999999999999999999999999999999999999875443  557


Q ss_pred             ceeeeCCCCCCCchHHHHHHHHHHhhhhhhhHHHHhhhhhccchhHHHHHHhccCCccCchhhccccchhhcccchHHHH
Q 004307          385 KQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIYRLLDPHFRYTMEINGLAR  464 (762)
Q Consensus       385 ~~VftP~d~~~~~~~W~LAK~~v~~aD~~~Hqli~Hll~THlv~Epf~iAt~RqLs~~HPI~kLL~PH~r~Tl~IN~~AR  464 (762)
                      ++||||+|++.++|.|+|||+||++||+++||+|+||++||++||||||||+||||.+|||||||.||||+||+||++||
T Consensus       315 ~~VftP~d~~~~~~~W~lAK~~v~~aD~~~HqlvsHll~THlv~Epf~IAt~RqLs~~HPI~kLL~PHfr~Tl~IN~~AR  394 (690)
T d3bnea1         315 SQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALAR  394 (690)
T ss_dssp             CEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHHHHHHHHHHSCTTCHHHHHHGGGGTTHHHHHHHHH
T ss_pred             CceeCCCCCCccchHHHHHHHHHHHhhHHHHHHHHhhhhhhhHHHHHHHHHHhcCCccCCHHHhcchhhhhhHHHHHHHH
Confidence            99999999766689999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcccCCCcccccccCCChhHHHHHHHHhhccCCCCccCCchHHHhcCCCCCCCCCCCcccccccCCccchhhHHHHHHHH
Q 004307          465 QALVNADGIIESSFSPGKYSMEFSSVAYDKQWRFDHEALPKDLISRGLAVEDPSAPHGLKLTIEDYPFANDGLDLWDAIK  544 (762)
Q Consensus       465 ~~LI~~gG~id~~~~~g~~~~el~~~~y~~~w~f~~~~lP~dL~~RG~~~~D~~~~~g~~~~lp~YpYrdDgl~iW~AI~  544 (762)
                      ++||++||++|+++++|+++++|++++|++ |+|++++||+||++|||+++|++++||+++.|||||||||||+||+||+
T Consensus       395 ~~LI~~gGiie~~~~~~~~~~el~~~ayk~-w~f~~~~lP~dL~~RGv~~~d~~~p~g~~l~ipdYPYrdDgL~iW~AI~  473 (690)
T d3bnea1         395 QSLINANGIAETTFLPSKYSVEMSSAVYKN-WVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIK  473 (690)
T ss_dssp             HHTSSTTSHHHHHSTTGGGHHHHHHHHHTT-CCGGGGSHHHHHHHTTSEEECTTSTTSEEESSSSCHHHHHHHHHHHHHH
T ss_pred             HhccCCCCeeeecccCchhHHHHHHHHHhc-CcccccCCHHHHHHcCCCcccccccccccccCCCCchhhhHHHHHHHHH
Confidence            999999999999999999999999999998 9999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhccccccccccccCCHHHHHHHHHHhhccCCCCCCCCCCCCCCChhHHHHHHhhheecccccccccccccccccc
Q 004307          545 QWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYTYGG  624 (762)
Q Consensus       545 ~fV~~yv~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~d~~~~p~~p~i~t~~~Lv~~lT~iIf~aS~qHAAVNfgQ~~~~g  624 (762)
                      +||++||++||++|++|++|.|||+||+||+++||+++++.+|||+|+|+++||++||+|||+||+||||||||||+|+|
T Consensus       474 ~~V~~yv~~YY~~D~~V~~D~ELQaW~~Ei~~~G~gd~kd~~~~p~l~T~~eLv~~lT~iIf~aSaqHAAVNfgQy~y~g  553 (690)
T d3bnea1         474 TWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGG  553 (690)
T ss_dssp             HHHHHHGGGTCSSHHHHHTCHHHHHHHHHHHHTTTGGGTTCTTSCCCCSHHHHHHHHHHHHHHHTHHHHHHHTTHHHHHS
T ss_pred             HHHHHHhhhccCCccccccCHHHHHHHHHHhcccCCCCCCCCCCCCCCCHHHHHHHHHHHHhhccHHHhhhccccccccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCccccCCCCCCCCCCchHHHHhhcccHHHHHccCCChHHHHHHHHHHHHhcCCCCCCccccCcCCCCCCCcHHHHH
Q 004307          625 YFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINA  704 (762)
Q Consensus       625 f~PN~P~~lr~p~P~~~kg~~~~~~~~~~~e~~~l~~LP~~~~a~~~m~~~~~LS~~~~de~yLG~~~~~~~~~d~~~~~  704 (762)
                      |+||+|++||+++|++  |..++++++.+|++++|++||++.||+.+|+++++||+|++||+|||+|++++|++|+++++
T Consensus       554 fvPN~P~~~r~~~P~~--~~~~~~~~~~~~e~~~L~tLP~~~qa~~~~~~~~~LS~~~~de~yLG~~~~~~~~~D~~~~~  631 (690)
T d3bnea1         554 LIMNRPTASRRLLPEK--GTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQ  631 (690)
T ss_dssp             STTTSCCCBCCCCCCT--TSHHHHHHHHCHHHHHHHHBCCHHHHHHHHHHHHHHTCBCTTCCBTTCCSCTTSCSCHHHHH
T ss_pred             cCCCCChHhcCCCCCC--CChhhhhhhhchHHHHHHhCCcHHHHHHHHHHHHHhccCCCCcccCCCCCCcccccChHHHH
Confidence            9999999999999986  88889999999999999999999999999999999999999999999999889999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCcccc-ccCCCccCCceeecCCCCCCCCcCCCCccccC
Q 004307          705 AFEKFRGKLMELEGIIDARNADPKLR-NRNGAGMVPYELLKPFSEPGVTGKGVPYSISI  762 (762)
Q Consensus       705 a~~~F~~~L~~ie~~I~~RN~~~~~k-nr~~~~~~PY~yL~Ps~~~g~t~~~IpnSIsI  762 (762)
                      |+++|+++|++||++|++||+++++| ||+|++++||+||+|+++||||||||||||||
T Consensus       632 a~~~F~~~L~~Ie~~I~~RN~~~~~~~nr~g~~~~PY~~L~Ps~~~g~t~~gIPnSIsI  690 (690)
T d3bnea1         632 AFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI  690 (690)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCGGGHHHHTTTTTCCCCTTCSCCCSBSCSCCCBSSCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCcccccccCCCCCCCccccCCCCCCCcCcCCCCCcccC
Confidence            99999999999999999999999999 99999999999999999999999999999998
>d2p0ma1 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d3bnea2 b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Back     information, alignment and structure
>d2p0ma2 b.12.1.1 (A:2-112) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1olpa2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium absonum [TaxId: 29369]} Back     information, alignment and structure
>d1ca1a2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium perfringens, different strains [TaxId: 1502]} Back     information, alignment and structure
>d1rp1a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} Back     information, alignment and structure
>d1bu8a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1gpla1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Guinea pig (Cavia porcellus) [TaxId: 10141]} Back     information, alignment and structure