Citrus Sinensis ID: 004309
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 762 | 2.2.26 [Sep-21-2011] | |||||||
| P35016 | 817 | Endoplasmin homolog OS=Ca | N/A | no | 0.998 | 0.931 | 0.823 | 0.0 | |
| Q9STX5 | 823 | Endoplasmin homolog OS=Ar | yes | no | 0.993 | 0.919 | 0.798 | 0.0 | |
| P36183 | 809 | Endoplasmin homolog OS=Ho | N/A | no | 0.955 | 0.899 | 0.812 | 0.0 | |
| Q66HD0 | 804 | Endoplasmin OS=Rattus nor | yes | no | 0.895 | 0.848 | 0.502 | 0.0 | |
| Q95M18 | 804 | Endoplasmin OS=Bos taurus | yes | no | 0.893 | 0.847 | 0.506 | 0.0 | |
| P08113 | 802 | Endoplasmin OS=Mus muscul | yes | no | 0.895 | 0.850 | 0.5 | 0.0 | |
| P08110 | 795 | Endoplasmin OS=Gallus gal | yes | no | 0.854 | 0.818 | 0.517 | 0.0 | |
| P41148 | 804 | Endoplasmin OS=Canis fami | yes | no | 0.893 | 0.847 | 0.506 | 0.0 | |
| Q29092 | 804 | Endoplasmin OS=Sus scrofa | yes | no | 0.893 | 0.847 | 0.506 | 0.0 | |
| Q4R520 | 804 | Endoplasmin OS=Macaca fas | N/A | no | 0.893 | 0.847 | 0.503 | 0.0 |
| >sp|P35016|ENPL_CATRO Endoplasmin homolog OS=Catharanthus roseus GN=HSP90 PE=2 SV=1 | Back alignment and function desciption |
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Score = 1224 bits (3167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 641/778 (82%), Positives = 698/778 (89%), Gaps = 17/778 (2%)
Query: 1 MRKWTIPSILLLLFLVALIPDQGRNIQAKAEDESDKLVDPPKVEEKLGAVPNGLSTDSDV 60
MRKWT+PS+L LL QGR I A AE +SD VDPPKVE+K+GAVPNGLSTDSDV
Sbjct: 1 MRKWTVPSVLFLLCPSLSSSCQGRKIHANAEADSDAPVDPPKVEDKIGAVPNGLSTDSDV 60
Query: 61 AKREAESISKRSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIR 120
AKREAES+S R+LR++AEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIR
Sbjct: 61 AKREAESMSMRNLRSDAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIR 120
Query: 121 FLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAF 180
FL+LTDKE+LGEGD KLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAF
Sbjct: 121 FLALTDKEILGEGDTAKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAF 180
Query: 181 VEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWN 240
VEKMQTSGDLNLIGQFGVGFYSVYLV DYVEVISKHNDDKQY+WESKADGAFAISED WN
Sbjct: 181 VEKMQTSGDLNLIGQFGVGFYSVYLVPDYVEVISKHNDDKQYIWESKADGAFAISEDVWN 240
Query: 241 EPLGRGTEIRLHLRDEAGEYLEESKLKELVKKYSEFINFPIYIWASKEVDVDVPTDEDDS 300
EPLGRGTEIRLHLRDEA EYL+E KLKELVK+YSEFINFPIY+WASKEV+V+VP +EDDS
Sbjct: 241 EPLGRGTEIRLHLRDEAQEYLDEFKLKELVKRYSEFINFPIYLWASKEVEVEVPAEEDDS 300
Query: 301 SDEEEKAEKEEETEKSESESEDEDEDSEKKPKTKTVKETTFEWELLNDVKAIWLRNPKEV 360
SD+E+ + +E+ E E +++ED +K KTK VKETT+EWELLND+KAIWLRNPK+V
Sbjct: 301 SDDEDNKSESSSSEEGEEEETEKEEDEKKP-KTKKVKETTYEWELLNDMKAIWLRNPKDV 359
Query: 361 TEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKAN 420
T++EY KFYHSL KDFS+EKPLAWSHF AEGDVEFKA +PPKAP DLYESYYN+NK+N
Sbjct: 360 TDDEYTKFYHSLAKDFSEEKPLAWSHFTAEGDVEFKAFTLLPPKAPQDLYESYYNSNKSN 419
Query: 421 LKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKA 480
LKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKA
Sbjct: 420 LKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKA 479
Query: 481 LDMIRKIAEEDPDESTGKDKKDVEKFSDDDDKKGQYTKFWNEFGKSIKLGIIEDAANRNR 540
LDMIRKIA+EDPDE+ KDKK+VE+ +D+D+KKGQY KFWNEFGKSIKLGIIEDAANRNR
Sbjct: 480 LDMIRKIADEDPDEANDKDKKEVEESTDNDEKKGQYAKFWNEFGKSIKLGIIEDAANRNR 539
Query: 541 LAKLLRFESTKSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEV 600
LAKLLRFESTKS+GKLTSLDQYISRMK+GQKDIFYITG +KEQLEKSPFLERL KKNYEV
Sbjct: 540 LAKLLRFESTKSEGKLTSLDQYISRMKSGQKDIFYITGTSKEQLEKSPFLERLTKKNYEV 599
Query: 601 IFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFKELTKWWKGALASE 660
I FTDPVDEYLMQYLMDYEDKKFQNVSKEGLK+GKD+KDKELKESFKELTKWWKGALASE
Sbjct: 600 ILFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKIGKDSKDKELKESFKELTKWWKGALASE 659
Query: 661 NVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHP 720
NVDDVK+SNRL NTPCVVVTSKYGWS+NMERIMQSQTLSDASKQAYMRGKRVLEINPRHP
Sbjct: 660 NVDDVKISNRLANTPCVVVTSKYGWSSNMERIMQSQTLSDASKQAYMRGKRVLEINPRHP 719
Query: 721 IIKELRERVVKDPEVEFF--------------SHFLLTGKDDFSNP--NSMYTSLKIC 762
IIKELRERVVKD E E S F+L +F++ +S+ +SLKI
Sbjct: 720 IIKELRERVVKDAEDESVKQTARLMYQTALMESGFMLNDPKEFASSIYDSVKSSLKIS 777
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May have a molecular chaperone role in the processing of secreted materials. Catharanthus roseus (taxid: 4058) |
| >sp|Q9STX5|ENPL_ARATH Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD PE=1 SV=1 | Back alignment and function description |
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| >sp|P36183|ENPL_HORVU Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1 | Back alignment and function description |
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| >sp|Q66HD0|ENPL_RAT Endoplasmin OS=Rattus norvegicus GN=Hsp90b1 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q95M18|ENPL_BOVIN Endoplasmin OS=Bos taurus GN=HSP90B1 PE=2 SV=1 | Back alignment and function description |
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| >sp|P08113|ENPL_MOUSE Endoplasmin OS=Mus musculus GN=Hsp90b1 PE=1 SV=2 | Back alignment and function description |
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| >sp|P08110|ENPL_CHICK Endoplasmin OS=Gallus gallus GN=HSP90B1 PE=1 SV=1 | Back alignment and function description |
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| >sp|P41148|ENPL_CANFA Endoplasmin OS=Canis familiaris GN=HSP90B1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q29092|ENPL_PIG Endoplasmin OS=Sus scrofa GN=HSP90B1 PE=2 SV=3 | Back alignment and function description |
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| >sp|Q4R520|ENPL_MACFA Endoplasmin OS=Macaca fascicularis GN=HSP90B1 PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 762 | ||||||
| 224085900 | 823 | predicted protein [Populus trichocarpa] | 0.960 | 0.889 | 0.893 | 0.0 | |
| 356553371 | 816 | PREDICTED: endoplasmin homolog [Glycine | 0.997 | 0.931 | 0.856 | 0.0 | |
| 255538970 | 816 | endoplasmin, putative [Ricinus communis] | 0.996 | 0.930 | 0.853 | 0.0 | |
| 356564371 | 814 | PREDICTED: endoplasmin homolog [Glycine | 0.997 | 0.933 | 0.850 | 0.0 | |
| 225457939 | 818 | PREDICTED: endoplasmin homolog [Vitis vi | 0.958 | 0.892 | 0.888 | 0.0 | |
| 365189292 | 812 | Heat shock protein 90 [Nicotiana tabacum | 0.993 | 0.932 | 0.846 | 0.0 | |
| 449469875 | 817 | PREDICTED: endoplasmin homolog [Cucumis | 0.996 | 0.929 | 0.840 | 0.0 | |
| 357438459 | 818 | Endoplasmin-like protein [Medicago trunc | 0.997 | 0.929 | 0.831 | 0.0 | |
| 365189290 | 811 | Heat shock protein 90 [Nicotiana tabacum | 0.992 | 0.932 | 0.844 | 0.0 | |
| 147865450 | 1084 | hypothetical protein VITISV_028074 [Viti | 0.946 | 0.665 | 0.852 | 0.0 |
| >gi|224085900|ref|XP_002307732.1| predicted protein [Populus trichocarpa] gi|222857181|gb|EEE94728.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 1301 bits (3368), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 656/734 (89%), Positives = 696/734 (94%), Gaps = 2/734 (0%)
Query: 1 MRKWTIPSILLLLFLVALIPDQGRNIQAKAEDESDKLVDPPKVEEKLGAVPNGLSTDSDV 60
MRKWT+PS+LLLL L++LI DQG+ + AKAED+SD LVDPPKVEEKLGAVPNGLSTDSDV
Sbjct: 1 MRKWTVPSVLLLLCLLSLISDQGQKLHAKAEDDSDSLVDPPKVEEKLGAVPNGLSTDSDV 60
Query: 61 AKREAESISKRSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIR 120
KRE+ESISKR+LRN AEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIR
Sbjct: 61 VKRESESISKRTLRNTAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIR 120
Query: 121 FLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAF 180
FLSLTDKEVLGEGDN KL+IQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAF
Sbjct: 121 FLSLTDKEVLGEGDNAKLDIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAF 180
Query: 181 VEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWN 240
VEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHN+DKQYVWESKADGAFAISEDTWN
Sbjct: 181 VEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNEDKQYVWESKADGAFAISEDTWN 240
Query: 241 EPLGRGTEIRLHLRDEAGEYLEESKLKELVKKYSEFINFPIYIWASKEVDVDVPTDEDDS 300
EPLGRGTEIRLHLR+EAGEYLEESKLK+LVKKYSEFINFPIY+WASKEVDV+VP DED+S
Sbjct: 241 EPLGRGTEIRLHLREEAGEYLEESKLKDLVKKYSEFINFPIYLWASKEVDVEVPADEDES 300
Query: 301 SDEEEKAEKEEETEKSESESEDEDEDSEKKPKTKTVKETTFEWELLNDVKAIWLRNPKEV 360
SDE+E + ++ +SE + EDED+E KPKTK +KETT+EWELLNDVKAIWLRNPKEV
Sbjct: 301 SDEDETTAESSSSDDGDSE-KSEDEDAEDKPKTKKIKETTYEWELLNDVKAIWLRNPKEV 359
Query: 361 TEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKAN 420
TEEEY KFYHSL KD DEKPLAWSHF AEGDVEFKAVLFVPPKAPHDLYESYYNTNKAN
Sbjct: 360 TEEEYTKFYHSLAKDLGDEKPLAWSHFTAEGDVEFKAVLFVPPKAPHDLYESYYNTNKAN 419
Query: 421 LKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKA 480
LKLYVRRVFISDEFDELLPKYLNFL GLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKA
Sbjct: 420 LKLYVRRVFISDEFDELLPKYLNFLMGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKA 479
Query: 481 LDMIRKIAEEDPDESTGKDKKDVEKFSDDDDKKGQYTKFWNEFGKSIKLGIIEDAANRNR 540
LDMIRKIA+EDPDE+ KDKKDVE S DD+KKGQY KFWNEFGKSIKLGIIED+ NRNR
Sbjct: 480 LDMIRKIADEDPDEANDKDKKDVEN-SSDDEKKGQYAKFWNEFGKSIKLGIIEDSVNRNR 538
Query: 541 LAKLLRFESTKSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEV 600
LAKLLRFE+TKSDGKLTSLDQYISRMK+GQKDIFYITG NKEQ+EKSPFLERLKKK YEV
Sbjct: 539 LAKLLRFETTKSDGKLTSLDQYISRMKSGQKDIFYITGPNKEQVEKSPFLERLKKKGYEV 598
Query: 601 IFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFKELTKWWKGALASE 660
I+FTDPVDEYLMQYLMDYED+KFQNVSKEGLKLGKD+K KELKESFKELTKWWKGALASE
Sbjct: 599 IYFTDPVDEYLMQYLMDYEDQKFQNVSKEGLKLGKDSKAKELKESFKELTKWWKGALASE 658
Query: 661 NVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHP 720
NVDDVK+SNRL +TPC+VVTSKYGWSANMERIMQ+QTLSDA+KQAYMRGKRVLEINPRHP
Sbjct: 659 NVDDVKISNRLADTPCIVVTSKYGWSANMERIMQAQTLSDANKQAYMRGKRVLEINPRHP 718
Query: 721 IIKELRERVVKDPE 734
IIKELRERVVKDPE
Sbjct: 719 IIKELRERVVKDPE 732
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356553371|ref|XP_003545030.1| PREDICTED: endoplasmin homolog [Glycine max] | Back alignment and taxonomy information |
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| >gi|255538970|ref|XP_002510550.1| endoplasmin, putative [Ricinus communis] gi|223551251|gb|EEF52737.1| endoplasmin, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|356564371|ref|XP_003550428.1| PREDICTED: endoplasmin homolog [Glycine max] | Back alignment and taxonomy information |
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| >gi|225457939|ref|XP_002273785.1| PREDICTED: endoplasmin homolog [Vitis vinifera] gi|302142682|emb|CBI19885.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|365189292|dbj|BAL42333.1| Heat shock protein 90 [Nicotiana tabacum] | Back alignment and taxonomy information |
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| >gi|449469875|ref|XP_004152644.1| PREDICTED: endoplasmin homolog [Cucumis sativus] gi|449503954|ref|XP_004162237.1| PREDICTED: endoplasmin homolog [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|357438459|ref|XP_003589505.1| Endoplasmin-like protein [Medicago truncatula] gi|355478553|gb|AES59756.1| Endoplasmin-like protein [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|365189290|dbj|BAL42332.1| Heat shock protein 90 [Nicotiana tabacum] | Back alignment and taxonomy information |
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| >gi|147865450|emb|CAN79404.1| hypothetical protein VITISV_028074 [Vitis vinifera] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 762 | ||||||
| UNIPROTKB|B9R8A7 | 816 | RCOM_1598250 "Endoplasmin, put | 0.509 | 0.475 | 0.933 | 0.0 | |
| TAIR|locus:2135887 | 823 | SHD "SHEPHERD" [Arabidopsis th | 0.514 | 0.476 | 0.890 | 6.6e-305 | |
| ZFIN|ZDB-GENE-031002-1 | 793 | hsp90b1 "heat shock protein 90 | 0.330 | 0.317 | 0.531 | 1.4e-168 | |
| UNIPROTKB|Q95M18 | 804 | HSP90B1 "Endoplasmin" [Bos tau | 0.330 | 0.313 | 0.531 | 4.6e-168 | |
| UNIPROTKB|Q29092 | 804 | HSP90B1 "Endoplasmin" [Sus scr | 0.330 | 0.313 | 0.535 | 1.2e-167 | |
| UNIPROTKB|F1P8N6 | 803 | HSP90B1 "Endoplasmin" [Canis l | 0.330 | 0.313 | 0.531 | 1.2e-167 | |
| UNIPROTKB|P41148 | 804 | HSP90B1 "Endoplasmin" [Canis l | 0.330 | 0.313 | 0.531 | 1.2e-167 | |
| MGI|MGI:98817 | 802 | Hsp90b1 "heat shock protein 90 | 0.330 | 0.314 | 0.531 | 2e-167 | |
| RGD|1310482 | 804 | Hsp90b1 "heat shock protein 90 | 0.330 | 0.313 | 0.527 | 2.5e-167 | |
| UNIPROTKB|Q4R520 | 804 | HSP90B1 "Endoplasmin" [Macaca | 0.330 | 0.313 | 0.531 | 5.2e-167 |
| UNIPROTKB|B9R8A7 RCOM_1598250 "Endoplasmin, putative" [Ricinus communis (taxid:3988)] | Back alignment and assigned GO terms |
|---|
Score = 1888 (669.7 bits), Expect = 0., Sum P(2) = 0.
Identities = 364/390 (93%), Positives = 373/390 (95%)
Query: 345 LLNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPK 404
LLNDVKAIWLRNPK+VT+EEY KFYHSL KDF DEKPLAWSHF AEGDVEFKAVLFVPPK
Sbjct: 344 LLNDVKAIWLRNPKDVTDEEYTKFYHSLAKDFGDEKPLAWSHFTAEGDVEFKAVLFVPPK 403
Query: 405 APHDLYESYYNTNKANLKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQ 464
APHDLYESYYN NK+NLKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQ
Sbjct: 404 APHDLYESYYNANKSNLKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQ 463
Query: 465 QHSSLKTIKKKLIRKALDMIRKIAEEDPDESTGKDKKDVEKFSDDDDKKGQYTKFWNEFG 524
QHSSLKTIKKKLIRKALDMIRKIA+EDPDE +DKKDVE S DD+KKGQY KFWNEFG
Sbjct: 464 QHSSLKTIKKKLIRKALDMIRKIADEDPDEMK-EDKKDVED-SGDDEKKGQYAKFWNEFG 521
Query: 525 KSIKLGIIEDAANRNRLAKLLRFESTKSDGKLTSLDQYISRMKAGQKDIFYITGANKEQL 584
KSIKLGIIEDA NRNRLAKLLRFESTKSDGKLTSLDQYISRMK+GQKDIFYITG NKEQL
Sbjct: 522 KSIKLGIIEDATNRNRLAKLLRFESTKSDGKLTSLDQYISRMKSGQKDIFYITGPNKEQL 581
Query: 585 EKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKE 644
EKSPFLERLKKK YEVIFFTDPVDEYLMQYLMDYE KKFQNVSKEGLKLGKD+KDKELKE
Sbjct: 582 EKSPFLERLKKKGYEVIFFTDPVDEYLMQYLMDYESKKFQNVSKEGLKLGKDSKDKELKE 641
Query: 645 SFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQ 704
SFKELTKWWKGALASENVDDVK+SNRLDNTPCVVVTSKYGWSANMERIM SQTLSDASKQ
Sbjct: 642 SFKELTKWWKGALASENVDDVKISNRLDNTPCVVVTSKYGWSANMERIMSSQTLSDASKQ 701
Query: 705 AYMRGKRVLEINPRHPIIKELRERVVKDPE 734
AYMRGKRVLEINPRHPIIKELRERVVKDPE
Sbjct: 702 AYMRGKRVLEINPRHPIIKELRERVVKDPE 731
|
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| TAIR|locus:2135887 SHD "SHEPHERD" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-031002-1 hsp90b1 "heat shock protein 90, beta (grp94), member 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q95M18 HSP90B1 "Endoplasmin" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q29092 HSP90B1 "Endoplasmin" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1P8N6 HSP90B1 "Endoplasmin" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P41148 HSP90B1 "Endoplasmin" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| MGI|MGI:98817 Hsp90b1 "heat shock protein 90, beta (Grp94), member 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| RGD|1310482 Hsp90b1 "heat shock protein 90, beta, member 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q4R520 HSP90B1 "Endoplasmin" [Macaca fascicularis (taxid:9541)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q4R520 | ENPL_MACFA | No assigned EC number | 0.5033 | 0.8937 | 0.8470 | N/A | no |
| P24724 | HSP90_THEPA | No assigned EC number | 0.4865 | 0.8228 | 0.8696 | yes | no |
| Q08277 | HSP82_MAIZE | No assigned EC number | 0.5028 | 0.8425 | 0.8979 | N/A | no |
| P41887 | HSP90_SCHPO | No assigned EC number | 0.4899 | 0.8451 | 0.9147 | yes | no |
| Q29092 | ENPL_PIG | No assigned EC number | 0.5060 | 0.8937 | 0.8470 | yes | no |
| P36183 | ENPL_HORVU | No assigned EC number | 0.8125 | 0.9553 | 0.8998 | N/A | no |
| Q7PT10 | HSP83_ANOGA | No assigned EC number | 0.4884 | 0.8464 | 0.8958 | yes | no |
| O18750 | ENPL_RABIT | No assigned EC number | 0.5051 | 0.8136 | 0.8659 | yes | no |
| Q9STX5 | ENPL_ARATH | No assigned EC number | 0.7982 | 0.9934 | 0.9198 | yes | no |
| O44001 | HSP90_EIMTE | No assigned EC number | 0.5030 | 0.8215 | 0.8779 | N/A | no |
| Q4UDU8 | HSP90_THEAN | No assigned EC number | 0.4865 | 0.8215 | 0.8670 | yes | no |
| Q95M18 | ENPL_BOVIN | No assigned EC number | 0.5060 | 0.8937 | 0.8470 | yes | no |
| P35016 | ENPL_CATRO | No assigned EC number | 0.8239 | 0.9986 | 0.9314 | N/A | no |
| P41148 | ENPL_CANFA | No assigned EC number | 0.5060 | 0.8937 | 0.8470 | yes | no |
| O43109 | HSP90_PODAS | No assigned EC number | 0.5113 | 0.8136 | 0.8844 | yes | no |
| P14625 | ENPL_HUMAN | No assigned EC number | 0.5033 | 0.8937 | 0.8480 | yes | no |
| P54651 | HSC90_DICDI | No assigned EC number | 0.4827 | 0.8398 | 0.9142 | yes | no |
| P08110 | ENPL_CHICK | No assigned EC number | 0.5176 | 0.8543 | 0.8188 | yes | no |
| P51819 | HSP83_IPONI | No assigned EC number | 0.5043 | 0.8398 | 0.9103 | N/A | no |
| P08113 | ENPL_MOUSE | No assigned EC number | 0.5 | 0.8950 | 0.8503 | yes | no |
| Q5R6F7 | ENPL_PONAB | No assigned EC number | 0.5020 | 0.8937 | 0.8470 | yes | no |
| Q66HD0 | ENPL_RAT | No assigned EC number | 0.5026 | 0.8950 | 0.8482 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | estExt_fgenesh4_pg.C_LG_V1547 | SubName- Full=Putative uncharacterized protein; (823 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
 | fgenesh4_pm.C_LG_XV000408 | • | 0.800 | ||||||||
 | fgenesh4_pm.C_LG_IV000317 | • | 0.800 | ||||||||
 | fgenesh4_pg.C_LG_II001977 | • | 0.800 | ||||||||
 | estExt_Genewise1_v1.C_440672 | • | 0.800 | ||||||||
 | eugene3.26620001 | • | 0.462 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 762 | |||
| PRK05218 | 613 | PRK05218, PRK05218, heat shock protein 90; Provisi | 0.0 | |
| pfam00183 | 529 | pfam00183, HSP90, Hsp90 protein | 0.0 | |
| COG0326 | 623 | COG0326, HtpG, Molecular chaperone, HSP90 family [ | 0.0 | |
| PTZ00272 | 701 | PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp | 0.0 | |
| PTZ00130 | 814 | PTZ00130, PTZ00130, heat shock protein 90; Provisi | 1e-163 | |
| PRK14083 | 601 | PRK14083, PRK14083, HSP90 family protein; Provisio | 1e-32 | |
| cd00075 | 103 | cd00075, HATPase_c, Histidine kinase-like ATPases; | 5e-10 | |
| smart00387 | 111 | smart00387, HATPase_c, Histidine kinase-like ATPas | 1e-09 | |
| pfam02518 | 111 | pfam02518, HATPase_c, Histidine kinase-, DNA gyras | 6e-09 | |
| pfam13589 | 134 | pfam13589, HATPase_c_3, Histidine kinase-, DNA gyr | 1e-05 | |
| TIGR00927 | 1096 | TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger | 2e-04 | |
| TIGR00585 | 312 | TIGR00585, mutl, DNA mismatch repair protein MutL | 0.002 | |
| TIGR01052 | 488 | TIGR01052, top6b, DNA topoisomerase VI, B subunit | 0.002 |
| >gnl|CDD|235366 PRK05218, PRK05218, heat shock protein 90; Provisional | Back alignment and domain information |
|---|
Score = 703 bits (1817), Expect = 0.0
Identities = 276/661 (41%), Positives = 394/661 (59%), Gaps = 103/661 (15%)
Query: 76 NAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDN 135
E EFQAEV +L+ ++I+SLYSNK+IFLRELISNASDA+DK+RF +LTD + +
Sbjct: 2 AMETGEFQAEVKQLLHLMIHSLYSNKEIFLRELISNASDAIDKLRFEALTDPALYEGDGD 61
Query: 136 TKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQ--TSGDLNLI 193
L+I+I DKE + L+I D GIGMT+E++I+NLGTIAKSGT F+EK++ D LI
Sbjct: 62 --LKIRISFDKEARTLTISDNGIGMTREEVIENLGTIAKSGTKEFLEKLKGDQKKDSQLI 119
Query: 194 GQFGVGFYSVYLVADYVEVISKH--NDDKQYVWESKADGAFAISEDTWNEPLGRGTEIRL 251
GQFGVGFYS ++VAD V VI++ + WES +G + I E E RGTEI L
Sbjct: 120 GQFGVGFYSAFMVADKVTVITRSAGPAAEAVRWESDGEGEYTIEEIEKEE---RGTEITL 176
Query: 252 HLRDEAGEYLEESKLKELVKKYSEFINFPIYIWASKEVDVDVPTDEDDSSDEEEKAEKEE 311
HL+++ E+L+E +++ ++KKYS+FI PI + ++EE
Sbjct: 177 HLKEDEDEFLDEWRIRSIIKKYSDFIPVPIKLE-----------------------KEEE 213
Query: 312 ETEKSESESEDEDEDSEKKPKTKTVKETTFEWELLNDVKAIWLRNPKEVTEEEYAKFYHS 371
ET +N A+W R+ E+T+EEY +FY
Sbjct: 214 ET--------------------------------INSASALWTRSKSEITDEEYKEFYKH 241
Query: 372 LVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKANLKLYVRRVFIS 431
L DF + PL W H N EG E+ +L++P KAP DL + K LKLYV+RVFI
Sbjct: 242 LAHDF--DDPLFWIHNNVEGPFEYTGLLYIPKKAPFDL---FNRDRKGGLKLYVKRVFIM 296
Query: 432 DEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRKIAEED 491
D+ +ELLP+YL F+KG++DS+ LPLNVSRE+LQ+ +K I+K + +K LD + K+A+ D
Sbjct: 297 DDAEELLPEYLRFVKGVIDSEDLPLNVSREILQEDRVVKKIRKAITKKVLDELEKLAKND 356
Query: 492 PDESTGKDKKDVEKFSDDDDKKGQYTKFWNEFGKSIKLGIIEDAANRNRLAKLLRFESTK 551
++ Y KFW EFG +K G+ ED ANR +LAKLLRF ST
Sbjct: 357 REK---------------------YEKFWKEFGPVLKEGLYEDFANREKLAKLLRFASTH 395
Query: 552 SDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYL 611
+GK SL +Y+ RMK GQK I+YITG ++E + SP LE KKK EV+ TDP+DE+
Sbjct: 396 -EGKYVSLAEYVERMKEGQKKIYYITGDSREAAKNSPHLELFKKKGIEVLLLTDPIDEFW 454
Query: 612 MQYLMDYEDKKFQNVSKEGLKLGKD-----TKDKELKESFKELTKWWKGALASENVDDVK 666
+ YL +++ K F++V++ L LGK+ + +E +E FK L + K AL + V DV+
Sbjct: 455 ISYLEEFDGKPFKSVARGDLDLGKEDEEEKEEKEEAEEEFKPLLERLKEAL-GDKVKDVR 513
Query: 667 VSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELR 726
+S+RL ++P +V + S ME++++ A+ Q K +LEINP HP++K+L
Sbjct: 514 LSHRLTDSPACLVADEGDMSTQMEKLLK------AAGQEVPESKPILEINPNHPLVKKLA 567
Query: 727 E 727
+
Sbjct: 568 D 568
|
Length = 613 |
| >gnl|CDD|215774 pfam00183, HSP90, Hsp90 protein | Back alignment and domain information |
|---|
| >gnl|CDD|223403 COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >gnl|CDD|240341 PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp83); Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|185466 PTZ00130, PTZ00130, heat shock protein 90; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237603 PRK14083, PRK14083, HSP90 family protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|238030 cd00075, HATPase_c, Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins | Back alignment and domain information |
|---|
| >gnl|CDD|214643 smart00387, HATPase_c, Histidine kinase-like ATPases | Back alignment and domain information |
|---|
| >gnl|CDD|217081 pfam02518, HATPase_c, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | Back alignment and domain information |
|---|
| >gnl|CDD|222246 pfam13589, HATPase_c_3, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | Back alignment and domain information |
|---|
| >gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger | Back alignment and domain information |
|---|
| >gnl|CDD|233035 TIGR00585, mutl, DNA mismatch repair protein MutL | Back alignment and domain information |
|---|
| >gnl|CDD|233250 TIGR01052, top6b, DNA topoisomerase VI, B subunit | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 762 | |||
| KOG0020 | 785 | consensus Endoplasmic reticulum glucose-regulated | 100.0 | |
| PTZ00130 | 814 | heat shock protein 90; Provisional | 100.0 | |
| PTZ00272 | 701 | heat shock protein 83 kDa (Hsp83); Provisional | 100.0 | |
| KOG0019 | 656 | consensus Molecular chaperone (HSP90 family) [Post | 100.0 | |
| COG0326 | 623 | HtpG Molecular chaperone, HSP90 family [Posttransl | 100.0 | |
| PRK05218 | 613 | heat shock protein 90; Provisional | 100.0 | |
| PRK14083 | 601 | HSP90 family protein; Provisional | 100.0 | |
| PF00183 | 531 | HSP90: Hsp90 protein; InterPro: IPR001404 Molecula | 100.0 | |
| PF13589 | 137 | HATPase_c_3: Histidine kinase-, DNA gyrase B-, and | 99.63 | |
| TIGR00585 | 312 | mutl DNA mismatch repair protein MutL. All protein | 99.41 | |
| COG1389 | 538 | DNA topoisomerase VI, subunit B [DNA replication, | 99.26 | |
| COG0323 | 638 | MutL DNA mismatch repair enzyme (predicted ATPase) | 99.21 | |
| PRK04184 | 535 | DNA topoisomerase VI subunit B; Validated | 99.11 | |
| PRK00095 | 617 | mutL DNA mismatch repair protein; Reviewed | 99.08 | |
| TIGR01052 | 488 | top6b DNA topoisomerase VI, B subunit. This model | 98.98 | |
| PRK14868 | 795 | DNA topoisomerase VI subunit B; Provisional | 98.85 | |
| PRK14867 | 659 | DNA topoisomerase VI subunit B; Provisional | 98.46 | |
| PRK05559 | 631 | DNA topoisomerase IV subunit B; Reviewed | 98.4 | |
| PF02518 | 111 | HATPase_c: Histidine kinase-, DNA gyrase B-, and H | 98.38 | |
| TIGR01055 | 625 | parE_Gneg DNA topoisomerase IV, B subunit, proteob | 98.24 | |
| smart00433 | 594 | TOP2c TopoisomeraseII. Eukaryotic DNA topoisomeras | 98.22 | |
| KOG1979 | 694 | consensus DNA mismatch repair protein - MLH1 famil | 98.16 | |
| TIGR01059 | 654 | gyrB DNA gyrase, B subunit. This model describes t | 98.05 | |
| PRK05644 | 638 | gyrB DNA gyrase subunit B; Validated | 98.04 | |
| KOG1978 | 672 | consensus DNA mismatch repair protein - MLH2/PMS1/ | 98.0 | |
| PRK14939 | 756 | gyrB DNA gyrase subunit B; Provisional | 97.95 | |
| KOG1977 | 1142 | consensus DNA mismatch repair protein - MLH3 famil | 97.35 | |
| cd00075 | 103 | HATPase_c Histidine kinase-like ATPases; This fami | 97.33 | |
| PRK10755 | 356 | sensor protein BasS/PmrB; Provisional | 97.1 | |
| TIGR02916 | 679 | PEP_his_kin putative PEP-CTERM system histidine ki | 96.97 | |
| TIGR02938 | 494 | nifL_nitrog nitrogen fixation negative regulator N | 96.91 | |
| PRK10549 | 466 | signal transduction histidine-protein kinase BaeS; | 96.87 | |
| smart00387 | 111 | HATPase_c Histidine kinase-like ATPases. Histidine | 96.86 | |
| TIGR01386 | 457 | cztS_silS_copS heavy metal sensor kinase. Members | 96.81 | |
| PRK11100 | 475 | sensory histidine kinase CreC; Provisional | 96.81 | |
| PRK11086 | 542 | sensory histidine kinase DcuS; Provisional | 96.79 | |
| PRK11006 | 430 | phoR phosphate regulon sensor protein; Provisional | 96.75 | |
| PRK10604 | 433 | sensor protein RstB; Provisional | 96.72 | |
| PRK09470 | 461 | cpxA two-component sensor protein; Provisional | 96.55 | |
| PRK15347 | 921 | two component system sensor kinase SsrA; Provision | 96.54 | |
| TIGR01058 | 637 | parE_Gpos DNA topoisomerase IV, B subunit, Gram-po | 96.51 | |
| PRK11466 | 914 | hybrid sensory histidine kinase TorS; Provisional | 96.47 | |
| TIGR02966 | 333 | phoR_proteo phosphate regulon sensor kinase PhoR. | 96.46 | |
| PRK10364 | 457 | sensor protein ZraS; Provisional | 96.42 | |
| PRK10815 | 485 | sensor protein PhoQ; Provisional | 96.4 | |
| PRK15053 | 545 | dpiB sensor histidine kinase DpiB; Provisional | 96.35 | |
| TIGR02956 | 968 | TMAO_torS TMAO reductase sytem sensor TorS. This p | 96.32 | |
| PRK11360 | 607 | sensory histidine kinase AtoS; Provisional | 96.28 | |
| PRK09303 | 380 | adaptive-response sensory kinase; Validated | 96.23 | |
| PLN03237 | 1465 | DNA topoisomerase 2; Provisional | 96.08 | |
| PRK11091 | 779 | aerobic respiration control sensor protein ArcB; P | 96.03 | |
| PLN03128 | 1135 | DNA topoisomerase 2; Provisional | 95.99 | |
| PHA02569 | 602 | 39 DNA topoisomerase II large subunit; Provisional | 95.9 | |
| COG0187 | 635 | GyrB Type IIA topoisomerase (DNA gyrase/topo II, t | 95.73 | |
| PRK09467 | 435 | envZ osmolarity sensor protein; Provisional | 95.67 | |
| PRK11107 | 919 | hybrid sensory histidine kinase BarA; Provisional | 95.54 | |
| TIGR03785 | 703 | marine_sort_HK proteobacterial dedicated sortase s | 95.52 | |
| PTZ00108 | 1388 | DNA topoisomerase 2-like protein; Provisional | 95.4 | |
| PRK10841 | 924 | hybrid sensory kinase in two-component regulatory | 95.4 | |
| PRK10490 | 895 | sensor protein KdpD; Provisional | 95.38 | |
| PRK10337 | 449 | sensor protein QseC; Provisional | 95.36 | |
| PRK10618 | 894 | phosphotransfer intermediate protein in two-compon | 95.28 | |
| PRK10600 | 569 | nitrate/nitrite sensor protein NarX; Provisional | 95.19 | |
| PRK13837 | 828 | two-component VirA-like sensor kinase; Provisional | 94.93 | |
| KOG0019 | 656 | consensus Molecular chaperone (HSP90 family) [Post | 94.55 | |
| PRK03660 | 146 | anti-sigma F factor; Provisional | 94.54 | |
| PRK10547 | 670 | chemotaxis protein CheA; Provisional | 94.37 | |
| COG4191 | 603 | Signal transduction histidine kinase regulating C4 | 94.36 | |
| TIGR01925 | 137 | spIIAB anti-sigma F factor. This model describes t | 94.33 | |
| COG3290 | 537 | CitA Signal transduction histidine kinase regulati | 94.01 | |
| PRK09959 | 1197 | hybrid sensory histidine kinase in two-component r | 93.92 | |
| PRK09835 | 482 | sensor kinase CusS; Provisional | 93.6 | |
| PTZ00109 | 903 | DNA gyrase subunit b; Provisional | 93.5 | |
| PRK13557 | 540 | histidine kinase; Provisional | 93.49 | |
| COG0642 | 336 | BaeS Signal transduction histidine kinase [Signal | 93.16 | |
| PRK11073 | 348 | glnL nitrogen regulation protein NR(II); Provision | 92.01 | |
| PRK04069 | 161 | serine-protein kinase RsbW; Provisional | 91.62 | |
| PF13581 | 125 | HATPase_c_2: Histidine kinase-like ATPase domain | 91.41 | |
| COG5000 | 712 | NtrY Signal transduction histidine kinase involved | 91.28 | |
| TIGR01924 | 159 | rsbW_low_gc serine-protein kinase RsbW. This model | 91.04 | |
| PRK13560 | 807 | hypothetical protein; Provisional | 89.87 | |
| COG3920 | 221 | Signal transduction histidine kinase [Signal trans | 89.38 | |
| COG4585 | 365 | Signal transduction histidine kinase [Signal trans | 89.28 | |
| PRK11644 | 495 | sensory histidine kinase UhpB; Provisional | 88.82 | |
| KOG0787 | 414 | consensus Dehydrogenase kinase [Signal transductio | 88.4 | |
| COG0643 | 716 | CheA Chemotaxis protein histidine kinase and relat | 88.13 | |
| COG4251 | 750 | Bacteriophytochrome (light-regulated signal transd | 86.78 | |
| COG3850 | 574 | NarQ Signal transduction histidine kinase, nitrate | 84.5 | |
| COG2172 | 146 | RsbW Anti-sigma regulatory factor (Ser/Thr protein | 82.97 |
| >KOG0020 consensus Endoplasmic reticulum glucose-regulated protein (GRP94/endoplasmin), HSP90 family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-205 Score=1633.59 Aligned_cols=708 Identities=60% Similarity=0.985 Sum_probs=660.2
Q ss_pred CCcccchhHHHHHHHHHhcCCCcccccccccccccccCCCcccccccCCCCCCCCCchhhhhhhhhhhh--------hhh
Q 004309 1 MRKWTIPSILLLLFLVALIPDQGRNIQAKAEDESDKLVDPPKVEEKLGAVPNGLSTDSDVAKREAESIS--------KRS 72 (762)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 72 (762)
|+.+.+.+++||+.+++++++....++ ..+++++|.+++|++++.++++|++++|+ .|+
T Consensus 1 m~~~~lv~~~~L~~~~~l~ad~~~~~~-------------~~~ee~~~~~~e~sk~e~e~~~ree~si~lDgl~~~q~ke 67 (785)
T KOG0020|consen 1 MRKRTLVSVLLLFGFLFLLADDERKLH-------------ATAEEDLGDVTEGSKTEEEIGGREEESIQLDGLNVSQIKE 67 (785)
T ss_pred CcchhHHHHHHHHHHHHhccccccccc-------------cchhhhccccCCCCcchhhhccccchheecccccHHHHHH
Confidence 788888888888777777776655554 34667799999999999999999999998 889
Q ss_pred ccccccccchhhcHHHHHHHHHHcCCCCchhHHHHhhhcHHHHHHHHHhhhccCccccCCCCCCccEEEEEEeCCccEEE
Q 004309 73 LRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILS 152 (762)
Q Consensus 73 ~~~~~e~~~Fqae~~~ll~ll~~sLYs~~~ifLRELIqNA~DA~~k~r~~~l~~~~~~g~~~~~~~~I~I~~d~~~~~L~ 152 (762)
+|..+++|+||+||+|||+||+||||+|++||||||||||+||++|+|+++|+++..+ +.++++.|+|..|++++.|+
T Consensus 68 lR~kaeKf~FQaEVnRmMklIINSLY~NKeIFLRELISNASDAlDKIRllaLtd~~~L--~~~~el~ikIK~Dke~klLh 145 (785)
T KOG0020|consen 68 LRSKAEKFEFQAEVNRMMKLIINSLYRNKEIFLRELISNASDALDKIRLLALTDKDVL--GETEELEIKIKADKEKKLLH 145 (785)
T ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhhhhhhheeeeeccChhHh--CcCcceEEEEeechhhCeee
Confidence 9999999999999999999999999999999999999999999999999999999999 67899999999999999999
Q ss_pred EEeCCCCCCHHHHHHHHHHHhcccchhHHHhhhccCC-----CCccccccccceeeeeeccEEEEEEeeCCCeeeEEEEc
Q 004309 153 IRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGD-----LNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESK 227 (762)
Q Consensus 153 I~DNGiGMt~eeL~~~LgtIa~Sg~~~f~~~~~~~~~-----~~~IGqFGIGFyS~FmVadkV~V~Sk~~~~~~~~W~s~ 227 (762)
|+|+|||||++||++||||||+||+++|+++|+..++ .++||||||||||+|+|||+|+|+|+|+++.+|+|+|+
T Consensus 146 i~DtGiGMT~edLi~NLGTIAkSGTs~Fl~Km~~~~~~~~~~~dlIGQFGVGFYsAfLVAD~vvVtsKhNdD~QyiWESd 225 (785)
T KOG0020|consen 146 ITDTGIGMTREDLIKNLGTIAKSGTSEFLEKMQDSGDSEGLMNDLIGQFGVGFYSAFLVADRVVVTSKHNDDSQYIWESD 225 (785)
T ss_pred EecccCCccHHHHHHhhhhhhcccHHHHHHHhhccccchhhHHHHHHhcchhhhhhhhhcceEEEEeccCCccceeeecc
Confidence 9999999999999999999999999999999986544 37999999999999999999999999999999999999
Q ss_pred CCCceEEEeCCCCCCCCCCeEEEEEecccccccccHHHHHHHHHHHcCCCCcceEEeeeeeeeccCCCCCCCCchhHHhh
Q 004309 228 ADGAFAISEDTWNEPLGRGTEIRLHLRDEAGEYLEESKLKELVKKYSEFINFPIYIWASKEVDVDVPTDEDDSSDEEEKA 307 (762)
Q Consensus 228 ~~~~f~I~~~~~~~~~~~GT~I~L~Lk~~~~e~l~~~~l~~likkys~fi~~PI~l~~~~~~~~~~~~~~~~~~~~~~~~ 307 (762)
+. +|+|.++|++++++|||+|+|||++++.+||++++|++||++||+||+|||++|.++++++++|.+|+++..++
T Consensus 226 an-~FsvseDprg~tL~RGt~ItL~LkeEA~dyLE~dtlkeLvkkYSqFINFpI~lWsSKt~~~E~pvEEe~~t~e~--- 301 (785)
T KOG0020|consen 226 AN-SFSVSEDPRGNTLGRGTEITLYLKEEAGDYLEEDTLKELVKKYSQFINFPISLWSSKTVEVEVPVEEEEETEED--- 301 (785)
T ss_pred Cc-ceeeecCCCCCcccCccEEEEEehhhhhhhcchhHHHHHHHHHHHhcCCceeeeeccceeeecccccccccccc---
Confidence 87 99999999999999999999999999999999999999999999999999999999999999987665432211
Q ss_pred hhhhhhhcccCCCCccccccccCCCcccceecccceeeeccCCcccccCCCCCCHHHHHHHHHHhhcCCCCCCCccceec
Q 004309 308 EKEEETEKSESESEDEDEDSEKKPKTKTVKETTFEWELLNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHF 387 (762)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~e~iN~~~piW~r~~~evt~eey~~Fyk~~~~~~~~~~PL~~~h~ 387 (762)
..+ +++ ..+|++++++||||+|++++|+|+.+|+.+|||+|+|++|+++||..|||++++|+ .+||+|+||
T Consensus 302 -~~e--d~e----a~vEEee~EKpKTKKV~kT~wdWel~NdvKpIW~R~p~eV~EdEYt~FYkSlsKds--~dPma~~HF 372 (785)
T KOG0020|consen 302 -STE--DKE----AAVEEEEEEKPKTKKVEKTVWDWELLNDVKPIWLRKPKEVTEDEYTKFYKSLSKDS--TDPMAYIHF 372 (785)
T ss_pred -ccc--chh----hhhhhhhhccccccchhhcchhhhhhcccchhhccCchhcchHHHHHHHHhhhccc--cCccceeee
Confidence 000 111 11233344469999999999999999999999999999999999999999999999 899999999
Q ss_pred cccccceeeEEEEecCCCCcchhhhhhcccccceEEEeeeccccccccccchhhhccccceecCCCCCCccchHhhhcch
Q 004309 388 NAEGDVEFKAVLFVPPKAPHDLYESYYNTNKANLKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHS 467 (762)
Q Consensus 388 ~~eg~~~f~~llyiP~~~p~~~~~~~~~~~~~~ikLYvrrVfI~d~~~~llP~yl~Fv~GVVDS~dLpLNvSRE~LQ~~~ 467 (762)
.+||.|+||+|||||+.+|.++|+.|+++...+||||||||||+|+|.++||+||+||||||||+|||||||||+||||+
T Consensus 373 ~aEGeVtFksiLyVP~~~P~~lf~~Yg~~~~dniKLYVrrVFItDeF~dmmPkYLsFikGvVDSDdLPLNVSrE~LQQHk 452 (785)
T KOG0020|consen 373 TAEGEVTFKSILYVPKKAPRDLFDEYGSKKSDNIKLYVRRVFITDEFHDMMPKYLSFIKGVVDSDDLPLNVSRETLQQHK 452 (785)
T ss_pred eccccEEEEEEEEeCCCCchHHHHHhccccccceeEEEEEEEecchHHHHhHHHHHHHhhccCcCcCcccccHHHHHHHH
Confidence 99999999999999999999999999878889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCCcccccccCCCchhhhHHHH-HHHHHhHHhhhhcccCHHhHHHHhhhcc
Q 004309 468 SLKTIKKKLIRKALDMIRKIAEEDPDESTGKDKKDVEKFSDDDDKKGQYTK-FWNEFGKSIKLGIIEDAANRNRLAKLLR 546 (762)
Q Consensus 468 ~l~~I~k~l~~k~l~~l~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~-f~~~f~~~lK~G~~eD~~nr~~l~~LLr 546 (762)
+|++|+|+||||+|+||++++.+ +|.. ||++||++||+|+++|++||.+||+|||
T Consensus 453 llKvIkKKLvrK~LDmikKia~e------------------------~~~d~FW~EFgtniKLGviED~sNr~rLAKLLr 508 (785)
T KOG0020|consen 453 LLKVIKKKLVRKVLDMIKKIAGE------------------------KYDDIFWKEFGTNIKLGVIEDPSNRTRLAKLLR 508 (785)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcc------------------------ccchHHHHHhccceeeeeeeCcccHHHHHHHHh
Confidence 99999999999999999999987 7777 9999999999999999999999999999
Q ss_pred ceecCCCCcccCHHHHHhhccCCCceEEEEeCCCHHHHhcChhHHHHHhCCCeEEecCCCCcHHHHHHhhhcCCcceEee
Q 004309 547 FESTKSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNV 626 (762)
Q Consensus 547 f~ss~~~~~~~sL~eYv~rmke~Q~~IYY~~g~s~~~~~~SP~lE~~~~kg~EVL~l~dpiDE~~i~~L~ef~gkkf~~V 626 (762)
|+||+++++.|||++|++|||+.|+.|||++|.|++++++|||+|+|.+|||||||||+||||||||+|++|+||+||||
T Consensus 509 Fqss~~~~~~TsLdqYveRMK~kQ~~IyymaGssr~e~E~sPfvERLlkKGyEVi~ltepVDEyciqalpe~d~KkFQNV 588 (785)
T KOG0020|consen 509 FQSSNHPTKITSLDQYVERMKEKQDKIYYMAGSSRKEVEKSPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDGKKFQNV 588 (785)
T ss_pred hhccCCCCCcccHHHHHHHHhhccccEEEecCCcHhhhccCcHHHHHHhcCceEEEEcchhHHHHHHhhhhhcchhHhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCc--ch--HHHHHHHHHHHHHHH-hhcccCCceeEEEeeccCCCCeEEEecCCcchHHHHHHHHHhccc--
Q 004309 627 SKEGLKLGKDT--KD--KELKESFKELTKWWK-GALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLS-- 699 (762)
Q Consensus 627 ~k~~~~l~~~e--k~--~~~~~~~~~L~~~~k-~~L~~~~V~~V~vS~RL~~sP~~lv~~e~g~s~~MeRimkaq~~~-- 699 (762)
+|+|+++++++ |+ +..+++|+||++||| .+|+++ |+++.||+||++|||+||++.||||+||+|||++|+++
T Consensus 589 aKEG~k~~~~eK~Ke~~e~l~~~FepL~~W~k~~alkd~-ieka~vSqrL~~spcalVas~~GwsgNmERimksqa~~~~ 667 (785)
T KOG0020|consen 589 AKEGVKFDKSEKTKESHEALEEEFEPLTKWLKDKALKDK-IEKAVVSQRLTESPCALVASQYGWSGNMERIMKSQAYQKS 667 (785)
T ss_pred HhhhcccCcccchhHHHHHHHHHHHHHHHHHHhhHHHHH-HHHHHHHHHhccCchhhhhhhccccccHHHHHHHhhhhcc
Confidence 99999998776 33 668899999999999 578888 99999999999999999999999999999999999997
Q ss_pred -ccccccccCCceeEEECCCChhHHHHHHhhcCCchhhh--------------ccCCCCCCHHHHHHHHHHhhcCCC
Q 004309 700 -DASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEVEF--------------FSHFLLTGKDDFSNPNSMYTSLKI 761 (762)
Q Consensus 700 -~~~~~~~~~~kkiLEINP~HPlIk~L~~~~~~d~~d~~--------------~sG~~leDp~~fa~ri~~~l~~~~ 761 (762)
|++.+.|+.+|++|||||+||||+.|++++.+|++|.. +|||.+.||.+|+.||++||++++
T Consensus 668 kD~~~~~Y~~qKkt~EINPRHPlirell~Ri~adeeD~t~~d~A~lmf~TAtlrSGf~L~d~~~fadrIe~~lr~sL 744 (785)
T KOG0020|consen 668 KDPSKNYYASQKKTFEINPRHPLIRELLRRIAADEEDETVKDTAVLMFETATLRSGFILQDTKDFADRIENMLRQSL 744 (785)
T ss_pred CCchhhHHhccCceeeeCCCChHHHHHHHHhhcCcccchHHHHHHHHHHHHHhhcCccccchHHHHHHHHHHHHhhc
Confidence 77777899999999999999999999999999887643 999999999999999999999876
|
|
| >PTZ00130 heat shock protein 90; Provisional | Back alignment and domain information |
|---|
| >PTZ00272 heat shock protein 83 kDa (Hsp83); Provisional | Back alignment and domain information |
|---|
| >KOG0019 consensus Molecular chaperone (HSP90 family) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >COG0326 HtpG Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK05218 heat shock protein 90; Provisional | Back alignment and domain information |
|---|
| >PRK14083 HSP90 family protein; Provisional | Back alignment and domain information |
|---|
| >PF00183 HSP90: Hsp90 protein; InterPro: IPR001404 Molecular chaperones, or heat shock proteins (Hsps) are ubiquitous proteins that act to maintain proper protein folding within the cell [] | Back alignment and domain information |
|---|
| >PF13589 HATPase_c_3: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PDB: 3IED_A 2XCM_B 2JKI_B 3OPD_A 2O1V_B 2GQP_A 2O1W_C 1YT2_A 1TC6_A 2H8M_B | Back alignment and domain information |
|---|
| >TIGR00585 mutl DNA mismatch repair protein MutL | Back alignment and domain information |
|---|
| >COG1389 DNA topoisomerase VI, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >COG0323 MutL DNA mismatch repair enzyme (predicted ATPase) [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >PRK04184 DNA topoisomerase VI subunit B; Validated | Back alignment and domain information |
|---|
| >PRK00095 mutL DNA mismatch repair protein; Reviewed | Back alignment and domain information |
|---|
| >TIGR01052 top6b DNA topoisomerase VI, B subunit | Back alignment and domain information |
|---|
| >PRK14868 DNA topoisomerase VI subunit B; Provisional | Back alignment and domain information |
|---|
| >PRK14867 DNA topoisomerase VI subunit B; Provisional | Back alignment and domain information |
|---|
| >PRK05559 DNA topoisomerase IV subunit B; Reviewed | Back alignment and domain information |
|---|
| >PF02518 HATPase_c: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; InterPro: IPR003594 This domain is found in several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases [], heat shock protein HSP90 [, , ], phytochrome-like ATPases and DNA mismatch repair proteins | Back alignment and domain information |
|---|
| >TIGR01055 parE_Gneg DNA topoisomerase IV, B subunit, proteobacterial | Back alignment and domain information |
|---|
| >smart00433 TOP2c TopoisomeraseII | Back alignment and domain information |
|---|
| >KOG1979 consensus DNA mismatch repair protein - MLH1 family [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >TIGR01059 gyrB DNA gyrase, B subunit | Back alignment and domain information |
|---|
| >PRK05644 gyrB DNA gyrase subunit B; Validated | Back alignment and domain information |
|---|
| >KOG1978 consensus DNA mismatch repair protein - MLH2/PMS1/Pms2 family [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PRK14939 gyrB DNA gyrase subunit B; Provisional | Back alignment and domain information |
|---|
| >KOG1977 consensus DNA mismatch repair protein - MLH3 family [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >cd00075 HATPase_c Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins | Back alignment and domain information |
|---|
| >PRK10755 sensor protein BasS/PmrB; Provisional | Back alignment and domain information |
|---|
| >TIGR02916 PEP_his_kin putative PEP-CTERM system histidine kinase | Back alignment and domain information |
|---|
| >TIGR02938 nifL_nitrog nitrogen fixation negative regulator NifL | Back alignment and domain information |
|---|
| >PRK10549 signal transduction histidine-protein kinase BaeS; Provisional | Back alignment and domain information |
|---|
| >smart00387 HATPase_c Histidine kinase-like ATPases | Back alignment and domain information |
|---|
| >TIGR01386 cztS_silS_copS heavy metal sensor kinase | Back alignment and domain information |
|---|
| >PRK11100 sensory histidine kinase CreC; Provisional | Back alignment and domain information |
|---|
| >PRK11086 sensory histidine kinase DcuS; Provisional | Back alignment and domain information |
|---|
| >PRK11006 phoR phosphate regulon sensor protein; Provisional | Back alignment and domain information |
|---|
| >PRK10604 sensor protein RstB; Provisional | Back alignment and domain information |
|---|
| >PRK09470 cpxA two-component sensor protein; Provisional | Back alignment and domain information |
|---|
| >PRK15347 two component system sensor kinase SsrA; Provisional | Back alignment and domain information |
|---|
| >TIGR01058 parE_Gpos DNA topoisomerase IV, B subunit, Gram-positive | Back alignment and domain information |
|---|
| >PRK11466 hybrid sensory histidine kinase TorS; Provisional | Back alignment and domain information |
|---|
| >TIGR02966 phoR_proteo phosphate regulon sensor kinase PhoR | Back alignment and domain information |
|---|
| >PRK10364 sensor protein ZraS; Provisional | Back alignment and domain information |
|---|
| >PRK10815 sensor protein PhoQ; Provisional | Back alignment and domain information |
|---|
| >PRK15053 dpiB sensor histidine kinase DpiB; Provisional | Back alignment and domain information |
|---|
| >TIGR02956 TMAO_torS TMAO reductase sytem sensor TorS | Back alignment and domain information |
|---|
| >PRK11360 sensory histidine kinase AtoS; Provisional | Back alignment and domain information |
|---|
| >PRK09303 adaptive-response sensory kinase; Validated | Back alignment and domain information |
|---|
| >PLN03237 DNA topoisomerase 2; Provisional | Back alignment and domain information |
|---|
| >PRK11091 aerobic respiration control sensor protein ArcB; Provisional | Back alignment and domain information |
|---|
| >PLN03128 DNA topoisomerase 2; Provisional | Back alignment and domain information |
|---|
| >PHA02569 39 DNA topoisomerase II large subunit; Provisional | Back alignment and domain information |
|---|
| >COG0187 GyrB Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >PRK09467 envZ osmolarity sensor protein; Provisional | Back alignment and domain information |
|---|
| >PRK11107 hybrid sensory histidine kinase BarA; Provisional | Back alignment and domain information |
|---|
| >TIGR03785 marine_sort_HK proteobacterial dedicated sortase system histidine kinase | Back alignment and domain information |
|---|
| >PTZ00108 DNA topoisomerase 2-like protein; Provisional | Back alignment and domain information |
|---|
| >PRK10841 hybrid sensory kinase in two-component regulatory system with RcsB and YojN; Provisional | Back alignment and domain information |
|---|
| >PRK10490 sensor protein KdpD; Provisional | Back alignment and domain information |
|---|
| >PRK10337 sensor protein QseC; Provisional | Back alignment and domain information |
|---|
| >PRK10618 phosphotransfer intermediate protein in two-component regulatory system with RcsBC; Provisional | Back alignment and domain information |
|---|
| >PRK10600 nitrate/nitrite sensor protein NarX; Provisional | Back alignment and domain information |
|---|
| >PRK13837 two-component VirA-like sensor kinase; Provisional | Back alignment and domain information |
|---|
| >KOG0019 consensus Molecular chaperone (HSP90 family) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK03660 anti-sigma F factor; Provisional | Back alignment and domain information |
|---|
| >PRK10547 chemotaxis protein CheA; Provisional | Back alignment and domain information |
|---|
| >COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >TIGR01925 spIIAB anti-sigma F factor | Back alignment and domain information |
|---|
| >COG3290 CitA Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK09959 hybrid sensory histidine kinase in two-component regulatory system with EvgA; Provisional | Back alignment and domain information |
|---|
| >PRK09835 sensor kinase CusS; Provisional | Back alignment and domain information |
|---|
| >PTZ00109 DNA gyrase subunit b; Provisional | Back alignment and domain information |
|---|
| >PRK13557 histidine kinase; Provisional | Back alignment and domain information |
|---|
| >COG0642 BaeS Signal transduction histidine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK11073 glnL nitrogen regulation protein NR(II); Provisional | Back alignment and domain information |
|---|
| >PRK04069 serine-protein kinase RsbW; Provisional | Back alignment and domain information |
|---|
| >PF13581 HATPase_c_2: Histidine kinase-like ATPase domain | Back alignment and domain information |
|---|
| >COG5000 NtrY Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >TIGR01924 rsbW_low_gc serine-protein kinase RsbW | Back alignment and domain information |
|---|
| >PRK13560 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >COG3920 Signal transduction histidine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG4585 Signal transduction histidine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK11644 sensory histidine kinase UhpB; Provisional | Back alignment and domain information |
|---|
| >KOG0787 consensus Dehydrogenase kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG0643 CheA Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG3850 NarQ Signal transduction histidine kinase, nitrate/nitrite-specific [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG2172 RsbW Anti-sigma regulatory factor (Ser/Thr protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 762 | ||||
| 2o1u_A | 666 | Structure Of Full Length Grp94 With Amp-Pnp Bound L | 1e-108 | ||
| 2o1t_A | 450 | Structure Of Middle Plus C-Terminal Domains (M+c) O | 1e-107 | ||
| 3hjc_A | 444 | Crystal Structure Of The Carboxy-Terminal Domain Of | 1e-100 | ||
| 2cg9_A | 677 | Crystal Structure Of An Hsp90-Sba1 Closed Chaperone | 3e-91 | ||
| 3q6m_A | 448 | Crystal Structure Of Human Mc-Hsp90 In C2221 Space | 3e-91 | ||
| 2cge_A | 405 | Crystal Structure Of An Hsp90-Sba1 Closed Chaperone | 8e-90 | ||
| 2o1w_A | 506 | Structure Of N-Terminal Plus Middle Domains (N+m) O | 9e-83 | ||
| 3pry_A | 268 | Crystal Structure Of The Middle Domain Of Human Hsp | 2e-72 | ||
| 2iop_A | 624 | Crystal Structure Of Full-Length Htpg, The Escheric | 2e-71 | ||
| 1hk7_A | 288 | Middle Domain Of Hsp90 Length = 288 | 2e-70 | ||
| 1usu_A | 260 | The Structure Of The Complex Between Aha1 And Hsp90 | 2e-69 | ||
| 1usv_A | 260 | The Structure Of The Complex Between Aha1 And Hsp90 | 2e-69 | ||
| 1y4s_A | 559 | Conformation Rearrangement Of Heat Shock Protein 90 | 9e-69 | ||
| 3peh_A | 281 | Crystal Structure Of The N-Terminal Domain Of An Hs | 2e-62 | ||
| 1u2o_A | 236 | Crystal Structure Of The N-Domain Of Grp94 Lacking | 1e-60 | ||
| 1u0y_A | 273 | N-Domain Of Grp94, With The Charged Domain, In Comp | 1e-60 | ||
| 1qy5_A | 269 | Crystal Structure Of The N-Domain Of The Er Hsp90 C | 1e-60 | ||
| 2gq0_A | 303 | Crystal Structure Of The Middle Domain Of Htpg, The | 3e-60 | ||
| 3ft5_A | 249 | Structure Of Hsp90 Bound With A Novel Fragment Leng | 4e-60 | ||
| 2xjg_A | 249 | Structure Of Hsp90 With Small Molecule Inhibitor Bo | 7e-60 | ||
| 2xjj_A | 249 | Structre Of Hsp90 With Small Molecule Inhibitor Bou | 8e-60 | ||
| 1uyi_A | 236 | Human Hsp90-Alpha With 8-(2,5-Dimethoxy-Benzyl)-2-F | 8e-60 | ||
| 3k60_A | 223 | Crystal Structure Of N-Terminal Domain Of Plasmodiu | 1e-59 | ||
| 2esa_A | 236 | Grp94 N-Terminal Domain Bound To Geldanamycin: Effe | 1e-59 | ||
| 3hhu_A | 224 | Human Heat-Shock Protein 90 (Hsp90) In Complex With | 1e-59 | ||
| 3qdd_A | 237 | Hsp90a N-Terminal Domain In Complex With Biib021 Le | 1e-59 | ||
| 2fwy_A | 256 | Structure Of Human Hsp90-Alpha Bound To The Potent | 1e-59 | ||
| 2yi0_A | 229 | Structural Characterization Of 5-Aryl-4-(5-Substitu | 1e-59 | ||
| 2bsm_A | 235 | Novel, Potent Small Molecule Inhibitors Of The Mole | 1e-59 | ||
| 2ye7_A | 252 | Hsp90 Inhibitors And Drugs From Fragment And Virtua | 1e-59 | ||
| 1uy6_A | 236 | Human Hsp90-Alpha With 9-Butyl-8-(3,4,5-Trimethoxy- | 1e-59 | ||
| 3bm9_A | 226 | Discovery Of Benzisoxazoles As Potent Inhibitors Of | 1e-59 | ||
| 3d0b_A | 232 | Crystal Structure Of Benzamide Tetrahydro-4h-Carbaz | 1e-59 | ||
| 2xdu_A | 236 | Structre Of Hsp90 With Small Molecule Inhibitor Bou | 1e-59 | ||
| 3inw_A | 228 | Hsp90 N-Terminal Domain With Pochoxime A Length = 2 | 1e-59 | ||
| 2jjc_A | 218 | Hsp90 Alpha Atpase Domain With Bound Small Molecule | 1e-59 | ||
| 3b24_A | 229 | Hsp90 Alpha N-Terminal Domain In Complex With An Am | 2e-59 | ||
| 4egh_A | 232 | Hsp90-Alpha Atpase Domain In Complex With (4-Hydrox | 2e-59 | ||
| 3k98_A | 232 | Hsp90 N-Terminal Domain In Complex With (1r)-2-(5-C | 2e-59 | ||
| 3eko_A | 226 | Dihydroxylphenyl Amides As Inhibitors Of The Hsp90 | 2e-59 | ||
| 4awo_A | 230 | Complex Of Hsp90 Atpase Domain With Tropane Derived | 2e-59 | ||
| 2ye2_A | 252 | Hsp90 Inhibitors And Drugs From Fragment And Virtua | 2e-59 | ||
| 3k97_A | 251 | Hsp90 N-Terminal Domain In Complex With 4-Chloro-6- | 2e-59 | ||
| 3r4m_A | 228 | Optimization Of Potent, Selective, And Orally Bioav | 2e-59 | ||
| 2yjw_A | 209 | Tricyclic Series Of Hsp90 Inhibitors Length = 209 | 2e-59 | ||
| 4eeh_A | 229 | Hsp90 Alpha N-Terminal Domain In Complex With An In | 2e-59 | ||
| 1osf_A | 215 | Human Hsp90 In Complex With 17-desmethoxy-17-n,n- D | 2e-59 | ||
| 3tuh_A | 209 | Crystal Structure Of The N-Terminal Domain Of An Hs | 2e-59 | ||
| 2ccs_A | 236 | Human Hsp90 With 4-Chloro-6-(4-Piperazin-1-Yl-1h-Py | 2e-59 | ||
| 2qfo_A | 207 | Hsp90 Complexed With A143571 And A516383 Length = 2 | 2e-59 | ||
| 1byq_A | 228 | Hsp90 N-Terminal Domain Bound To Adp-Mg Length = 22 | 3e-59 | ||
| 2k5b_A | 210 | Human Cdc37-Hsp90 Docking Model Based On Nmr Length | 4e-59 | ||
| 2qf6_A | 207 | Hsp90 Complexed With A56322 Length = 207 | 5e-59 | ||
| 1yc1_A | 264 | Crystal Structures Of Human Hsp90alpha Complexed Wi | 5e-59 | ||
| 2xcm_A | 214 | Complex Of Hsp90 N-Terminal, Sgt1 Cs And Rar1 Chord | 7e-59 | ||
| 2yee_A | 252 | Hsp90 Inhibitors And Drugs From Fragment And Virtua | 8e-59 | ||
| 1ah8_A | 220 | Structure Of The Orthorhombic Form Of The N-Termina | 9e-59 | ||
| 2bre_A | 219 | Structure Of A Hsp90 Inhibitor Bound To The N-Termi | 1e-58 | ||
| 1zw9_A | 240 | Yeast Hsp82 In Complex With The Novel Hsp90 Inhibit | 1e-58 | ||
| 1us7_A | 214 | Complex Of Hsp90 And P50 Length = 214 | 1e-58 | ||
| 1a4h_A | 230 | Structure Of The N-Terminal Domain Of The Yeast Hsp | 1e-58 | ||
| 2xx2_A | 214 | Macrolactone Inhibitor Bound To Hsp90 N-Term Length | 1e-58 | ||
| 1am1_A | 213 | Atp Binding Site In The Hsp90 Molecular Chaperone L | 1e-58 | ||
| 2cgf_A | 225 | A Radicicol Analogue Bound To The Atp Binding Site | 1e-58 | ||
| 2jki_A | 223 | Complex Of Hsp90 N-terminal And Sgt1 Cs Domain Leng | 1e-58 | ||
| 1bgq_A | 225 | Radicicol Bound To The Atp Binding Site Of The N-Te | 2e-58 | ||
| 2wep_A | 220 | Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With Adp | 2e-58 | ||
| 1uym_A | 220 | Human Hsp90-Beta With Pu3 (9-Butyl-8(3,4,5-Trimetho | 4e-58 | ||
| 3nmq_A | 239 | Hsp90b N-Terminal Domain In Complex With Ec44, A Py | 5e-58 | ||
| 2yge_A | 220 | E88g-n92l Mutant Of N-term Hsp90 Complexed With Gel | 6e-58 | ||
| 3c0e_A | 240 | Yeast Hsp82 N-Terminal Domain: Effects Of Mutants 9 | 9e-58 | ||
| 2ygf_A | 220 | L89v, L93i And V136m Mutant Of N-term Hsp90 Complex | 1e-57 | ||
| 2yga_A | 220 | E88g-n92l Mutant Of N-term Hsp90 Complexed With Gel | 3e-57 | ||
| 3h80_A | 231 | Crystal Structure Of The Amino-Terminal Domain Of H | 3e-57 | ||
| 1y6z_A | 263 | Middle Domain Of Plasmodium Falciparum Putative Hea | 1e-54 | ||
| 4gqt_A | 227 | N-Terminal Domain Of C. Elegans Hsp90 Length = 227 | 2e-54 | ||
| 3o6o_A | 214 | Crystal Structure Of The N-Terminal Domain Of An Hs | 3e-54 | ||
| 3opd_A | 231 | Crystal Structure Of The N-Terminal Domain Of An Hs | 3e-54 | ||
| 2akp_A | 186 | Hsp90 Delta24-n210 Mutant Length = 186 | 4e-49 | ||
| 3ied_A | 272 | Crystal Structure Of N-Terminal Domain Of Plasmodiu | 4e-42 | ||
| 2ior_A | 235 | Crystal Structure Of The N-Terminal Domain Of Htpg, | 7e-41 |
| >pdb|2O1U|A Chain A, Structure Of Full Length Grp94 With Amp-Pnp Bound Length = 666 | Back alignment and structure |
|
| >pdb|2O1T|A Chain A, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94 Length = 450 | Back alignment and structure |
| >pdb|3HJC|A Chain A, Crystal Structure Of The Carboxy-Terminal Domain Of Hsp90 From Leishmania Major, Lmjf33.0312 Length = 444 | Back alignment and structure |
| >pdb|2CG9|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex Length = 677 | Back alignment and structure |
| >pdb|3Q6M|A Chain A, Crystal Structure Of Human Mc-Hsp90 In C2221 Space Group Length = 448 | Back alignment and structure |
| >pdb|2CGE|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex Length = 405 | Back alignment and structure |
| >pdb|2O1W|A Chain A, Structure Of N-Terminal Plus Middle Domains (N+m) Of Grp94 Length = 506 | Back alignment and structure |
| >pdb|3PRY|A Chain A, Crystal Structure Of The Middle Domain Of Human Hsp90-Beta Refined At 2.3 A Resolution Length = 268 | Back alignment and structure |
| >pdb|2IOP|A Chain A, Crystal Structure Of Full-Length Htpg, The Escherichia Coli Hsp90, Bound To Adp Length = 624 | Back alignment and structure |
| >pdb|1HK7|A Chain A, Middle Domain Of Hsp90 Length = 288 | Back alignment and structure |
| >pdb|1USU|A Chain A, The Structure Of The Complex Between Aha1 And Hsp90 Length = 260 | Back alignment and structure |
| >pdb|1USV|A Chain A, The Structure Of The Complex Between Aha1 And Hsp90 Length = 260 | Back alignment and structure |
| >pdb|1Y4S|A Chain A, Conformation Rearrangement Of Heat Shock Protein 90 Upon Adp Binding Length = 559 | Back alignment and structure |
| >pdb|3PEH|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From Plasmodium Falciparum, Pfl1070c In The Presence Of A Thienopyrimidine Derivative Length = 281 | Back alignment and structure |
| >pdb|1U2O|A Chain A, Crystal Structure Of The N-Domain Of Grp94 Lacking The Charged Domain In Complex With Neca Length = 236 | Back alignment and structure |
| >pdb|1U0Y|A Chain A, N-Domain Of Grp94, With The Charged Domain, In Complex With The Novel Ligand N-Propyl Carboxyamido Adenosine Length = 273 | Back alignment and structure |
| >pdb|1QY5|A Chain A, Crystal Structure Of The N-Domain Of The Er Hsp90 Chaperone Grp94 In Complex With The Specific Ligand Neca Length = 269 | Back alignment and structure |
| >pdb|2GQ0|A Chain A, Crystal Structure Of The Middle Domain Of Htpg, The E. Coli Hsp90 Length = 303 | Back alignment and structure |
| >pdb|3FT5|A Chain A, Structure Of Hsp90 Bound With A Novel Fragment Length = 249 | Back alignment and structure |
| >pdb|2XJG|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound Length = 249 | Back alignment and structure |
| >pdb|2XJJ|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound Length = 249 | Back alignment and structure |
| >pdb|1UYI|A Chain A, Human Hsp90-Alpha With 8-(2,5-Dimethoxy-Benzyl)-2-Fluoro-9- Pent-9h-Purin-6-Ylamine Length = 236 | Back alignment and structure |
| >pdb|3K60|A Chain A, Crystal Structure Of N-Terminal Domain Of Plasmodium Falciparum Hsp90 (Pf07_0029) Bound To Adp Length = 223 | Back alignment and structure |
| >pdb|2ESA|A Chain A, Grp94 N-Terminal Domain Bound To Geldanamycin: Effects Of Mutants 168- 169 Ks-Aa Length = 236 | Back alignment and structure |
| >pdb|3HHU|A Chain A, Human Heat-Shock Protein 90 (Hsp90) In Complex With {4-[3- (2,4-Dihydroxy-5-Isopropyl-Phenyl)-5-Thioxo- 1,5-Dihydro- [1,2,4]triazol-4-Yl]-Benzyl}-Carbamic Acid Ethyl Ester {zk 2819} Length = 224 | Back alignment and structure |
| >pdb|3QDD|A Chain A, Hsp90a N-Terminal Domain In Complex With Biib021 Length = 237 | Back alignment and structure |
| >pdb|2FWY|A Chain A, Structure Of Human Hsp90-Alpha Bound To The Potent Water Soluble Inhibitor Pu-H64 Length = 256 | Back alignment and structure |
| >pdb|2YI0|A Chain A, Structural Characterization Of 5-Aryl-4-(5-Substituted-2-4- Dihydroxyphenyl)-1,2,3-Thiadiazole Hsp90 Inhibitors. Length = 229 | Back alignment and structure |
| >pdb|2BSM|A Chain A, Novel, Potent Small Molecule Inhibitors Of The Molecular Chaperone Hsp90 Discovered Through Structure-Based Design Length = 235 | Back alignment and structure |
| >pdb|2YE7|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual Screening Length = 252 | Back alignment and structure |
| >pdb|1UY6|A Chain A, Human Hsp90-Alpha With 9-Butyl-8-(3,4,5-Trimethoxy-Benzyl)-9h-Purin-6-Ylamine Length = 236 | Back alignment and structure |
| >pdb|3BM9|A Chain A, Discovery Of Benzisoxazoles As Potent Inhibitors Of Chaperone Hsp90 Length = 226 | Back alignment and structure |
| >pdb|3D0B|A Chain A, Crystal Structure Of Benzamide Tetrahydro-4h-Carbazol-4-One Bound To Hsp90 Length = 232 | Back alignment and structure |
| >pdb|2XDU|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound Length = 236 | Back alignment and structure |
| >pdb|3INW|A Chain A, Hsp90 N-Terminal Domain With Pochoxime A Length = 228 | Back alignment and structure |
| >pdb|2JJC|A Chain A, Hsp90 Alpha Atpase Domain With Bound Small Molecule Fragment Length = 218 | Back alignment and structure |
| >pdb|3B24|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Aminotriazine Fragment Molecule Length = 229 | Back alignment and structure |
| >pdb|4EGH|A Chain A, Hsp90-Alpha Atpase Domain In Complex With (4-Hydroxyphenyl)morpholin- 4-Yl Methanone Length = 232 | Back alignment and structure |
| >pdb|3K98|A Chain A, Hsp90 N-Terminal Domain In Complex With (1r)-2-(5-Chloro-2, 4-Dihydroxybenzoyl)-N-Ethylisoindoline-1-Carboxamide Length = 232 | Back alignment and structure |
| >pdb|3EKO|A Chain A, Dihydroxylphenyl Amides As Inhibitors Of The Hsp90 Molecular Chaperone Length = 226 | Back alignment and structure |
| >pdb|4AWO|A Chain A, Complex Of Hsp90 Atpase Domain With Tropane Derived Inhibitors Length = 230 | Back alignment and structure |
| >pdb|2YE2|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual Screening Length = 252 | Back alignment and structure |
| >pdb|3K97|A Chain A, Hsp90 N-Terminal Domain In Complex With 4-Chloro-6-{[(2r)-2- (2-Methylphenyl)pyrrolidin-1-Yl]carbonyl}benzene-1, 3-Diol Length = 251 | Back alignment and structure |
| >pdb|3R4M|A Chain A, Optimization Of Potent, Selective, And Orally Bioavailable Pyrrolodinopyrimidine-Containing Inhibitors Of Heat Shock Protein 90. Identification Of Development Candidate 2-Amino-4-{4-Chloro-2-[2-(4- Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2- Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3, 4-D]pyrimidine-6-Carboxamide Length = 228 | Back alignment and structure |
| >pdb|2YJW|A Chain A, Tricyclic Series Of Hsp90 Inhibitors Length = 209 | Back alignment and structure |
| >pdb|4EEH|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor 3-(4- Hydroxy-Phenyl)-1h-Indazol-6-Ol Length = 229 | Back alignment and structure |
| >pdb|1OSF|A Chain A, Human Hsp90 In Complex With 17-desmethoxy-17-n,n- Dimethylaminoethylamino-geldanamycin Length = 215 | Back alignment and structure |
| >pdb|3TUH|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 In The Presence Of An The Inhibitor Ganetespib Length = 209 | Back alignment and structure |
| >pdb|2CCS|A Chain A, Human Hsp90 With 4-Chloro-6-(4-Piperazin-1-Yl-1h-Pyrazol-3- Yl)-Benzene-1,2-Diol Length = 236 | Back alignment and structure |
| >pdb|2QFO|A Chain A, Hsp90 Complexed With A143571 And A516383 Length = 207 | Back alignment and structure |
| >pdb|1BYQ|A Chain A, Hsp90 N-Terminal Domain Bound To Adp-Mg Length = 228 | Back alignment and structure |
| >pdb|2K5B|A Chain A, Human Cdc37-Hsp90 Docking Model Based On Nmr Length = 210 | Back alignment and structure |
| >pdb|2QF6|A Chain A, Hsp90 Complexed With A56322 Length = 207 | Back alignment and structure |
| >pdb|1YC1|A Chain A, Crystal Structures Of Human Hsp90alpha Complexed With Dihydroxyphenylpyrazoles Length = 264 | Back alignment and structure |
| >pdb|2XCM|A Chain A, Complex Of Hsp90 N-Terminal, Sgt1 Cs And Rar1 Chord2 Domain Length = 214 | Back alignment and structure |
| >pdb|2YEE|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual Screening Length = 252 | Back alignment and structure |
| >pdb|1AH8|A Chain A, Structure Of The Orthorhombic Form Of The N-Terminal Domain Of The Yeast Hsp90 Chaperone Length = 220 | Back alignment and structure |
| >pdb|2BRE|A Chain A, Structure Of A Hsp90 Inhibitor Bound To The N-Terminus Of Yeast Hsp90. Length = 219 | Back alignment and structure |
| >pdb|1ZW9|A Chain A, Yeast Hsp82 In Complex With The Novel Hsp90 Inhibitor 8-(6-Bromo- Benzo[1, 3]dioxol-5-Ylsulfanyl)-9-(3-Isopropylamino-Propyl)- Adenine Length = 240 | Back alignment and structure |
| >pdb|1US7|A Chain A, Complex Of Hsp90 And P50 Length = 214 | Back alignment and structure |
| >pdb|1A4H|A Chain A, Structure Of The N-Terminal Domain Of The Yeast Hsp90 Chaperone In Complex With Geldanamycin Length = 230 | Back alignment and structure |
| >pdb|2XX2|A Chain A, Macrolactone Inhibitor Bound To Hsp90 N-Term Length = 214 | Back alignment and structure |
| >pdb|1AM1|A Chain A, Atp Binding Site In The Hsp90 Molecular Chaperone Length = 213 | Back alignment and structure |
| >pdb|2CGF|A Chain A, A Radicicol Analogue Bound To The Atp Binding Site Of The N- Terminal Domain Of The Yeast Hsp90 Chaperone Length = 225 | Back alignment and structure |
| >pdb|2JKI|A Chain A, Complex Of Hsp90 N-terminal And Sgt1 Cs Domain Length = 223 | Back alignment and structure |
| >pdb|1BGQ|A Chain A, Radicicol Bound To The Atp Binding Site Of The N-Terminal Domain Of The Yeast Hsp90 Chaperone Length = 225 | Back alignment and structure |
| >pdb|2WEP|A Chain A, Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With Adp Length = 220 | Back alignment and structure |
| >pdb|1UYM|A Chain A, Human Hsp90-Beta With Pu3 (9-Butyl-8(3,4,5-Trimethoxy-Benzyl)-9h-Purin-6-Ylamine) Length = 220 | Back alignment and structure |
| >pdb|3NMQ|A Chain A, Hsp90b N-Terminal Domain In Complex With Ec44, A Pyrrolo-Pyrimidine Methoxypyridine Inhibitor Length = 239 | Back alignment and structure |
| >pdb|2YGE|A Chain A, E88g-n92l Mutant Of N-term Hsp90 Complexed With Geldanamycin Length = 220 | Back alignment and structure |
| >pdb|3C0E|A Chain A, Yeast Hsp82 N-Terminal Domain: Effects Of Mutants 98-99 Ks- Aa Length = 240 | Back alignment and structure |
| >pdb|2YGF|A Chain A, L89v, L93i And V136m Mutant Of N-term Hsp90 Complexed With Geldanamycin Length = 220 | Back alignment and structure |
| >pdb|2YGA|A Chain A, E88g-n92l Mutant Of N-term Hsp90 Complexed With Geldanamycin Length = 220 | Back alignment and structure |
| >pdb|3H80|A Chain A, Crystal Structure Of The Amino-Terminal Domain Of Hsp90 From Leishmania Major, Lmjf33.0312:m1-K213 Length = 231 | Back alignment and structure |
| >pdb|1Y6Z|A Chain A, Middle Domain Of Plasmodium Falciparum Putative Heat Shock Protein Pf14_0417 Length = 263 | Back alignment and structure |
| >pdb|4GQT|A Chain A, N-Terminal Domain Of C. Elegans Hsp90 Length = 227 | Back alignment and structure |
| >pdb|3O6O|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of An The Inhibitor Biib021 Length = 214 | Back alignment and structure |
| >pdb|3OPD|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of A Benzamide Derivative Length = 231 | Back alignment and structure |
| >pdb|2AKP|A Chain A, Hsp90 Delta24-n210 Mutant Length = 186 | Back alignment and structure |
| >pdb|3IED|A Chain A, Crystal Structure Of N-Terminal Domain Of Plasmodium Falciparum Hsp90 (Pf14_0417) In Complex With Amppn Length = 272 | Back alignment and structure |
| >pdb|2IOR|A Chain A, Crystal Structure Of The N-Terminal Domain Of Htpg, The Escherichia Coli Hsp90, Bound To Adp Length = 235 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} Length = 677 | Back alignment and structure |
|---|
Score = 876 bits (2264), Expect = 0.0
Identities = 323/662 (48%), Positives = 462/662 (69%), Gaps = 32/662 (4%)
Query: 76 NAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDN 135
+E FEFQAE+++LM +IIN++YSNK+IFLRELISNASDALDKIR+ SL+D + L +
Sbjct: 2 ASETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPD 61
Query: 136 TKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQ 195
L I+I E+K+L IRD GIGMTK +LI NLGTIAKSGT AF+E + D+++IGQ
Sbjct: 62 --LFIRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQ 119
Query: 196 FGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIRLHLRD 255
FGVGFYS++LVAD V+VISK NDD+QY+WES A G+F ++ D NE +GRGT +RL L+D
Sbjct: 120 FGVGFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKD 179
Query: 256 EAGEYLEESKLKELVKKYSEFINFPIYIWASKEVDVDVPTDEDDSSDEEEKAEKEEETEK 315
+ EYLEE ++KE++K++SEF+ +PI + +KEV+ +VP E++ DEE+K E++++ +
Sbjct: 180 DQLEYLEEKRIKEVIKRHSEFVAYPIQLVVTKEVEKEVPIPEEEKKDEEKKDEEKKDEDD 239
Query: 316 SESESEDEDEDSEKKPKTKTVKETTFEWELLNDVKAIWLRNPKEVTEEEYAKFYHSLVKD 375
+ + E+ DE+ EKKPKTK VKE E E LN K +W RNP ++T+EEY FY S+ D
Sbjct: 240 KKPKLEEVDEEEEKKPKTKKVKEEVQEIEELNKTKPLWTRNPSDITQEEYNAFYKSISND 299
Query: 376 FSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKANLKLYVRRVFISDEFD 435
+ D PL HF+ EG +EF+A+LF+P +AP DL+ES N N+KLYVRRVFI+DE +
Sbjct: 300 WED--PLYVKHFSVEGQLEFRAILFIPKRAPFDLFESKKKKN--NIKLYVRRVFITDEAE 355
Query: 436 ELLPKYLNFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRKIAEEDPDES 495
+L+P++L+F+KG+VDS+ LPLN+SREMLQQ+ +K I+K +++K ++ +IAE+
Sbjct: 356 DLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKNIVKKLIEAFNEIAEDSEQ-- 413
Query: 496 TGKDKKDVEKFSDDDDKKGQYTKFWNEFGKSIKLGIIEDAANRNRLAKLLRFESTKSDGK 555
+ KF++ F K+IKLG+ ED NR LAKLLR+ STKS +
Sbjct: 414 --------------------FEKFYSAFSKNIKLGVHEDTQNRAALAKLLRYNSTKSVDE 453
Query: 556 LTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYL 615
LTSL Y++RM QK+I+YITG + + +EKSPFL+ LK KN+EV+F TDP+DEY L
Sbjct: 454 LTSLTDYVTRMPEHQKNIYYITGESLKAVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQL 513
Query: 616 MDYEDKKFQNVSKEGLKLGKD---TKDKELKESFKELTKWWKGALASENVDDVKVSNRLD 672
++E K +++K+ D + ++ + ++ LTK K L + V+ V VS +L
Sbjct: 514 KEFEGKTLVDITKDFELEETDEEKAEREKEIKEYEPLTKALKEIL-GDQVEKVVVSYKLL 572
Query: 673 NTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKD 732
+ P + T ++GWSANMERIM++Q L D+S +YM K+ EI+P+ PIIKEL++RV +
Sbjct: 573 DAPAAIRTGQFGWSANMERIMKAQALRDSSMSSYMSSKKTFEISPKSPIIKELKKRVDEG 632
Query: 733 PE 734
Sbjct: 633 GA 634
|
| >2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A Length = 666 | Back alignment and structure |
|---|
| >2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A Length = 624 | Back alignment and structure |
|---|
| >1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A Length = 559 | Back alignment and structure |
|---|
| >3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major} Length = 444 | Back alignment and structure |
|---|
| >3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A Length = 448 | Back alignment and structure |
|---|
| >2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae} Length = 405 | Back alignment and structure |
|---|
| >3pry_A Heat shock protein HSP 90-beta; structural genomics, structural genomics consortium, SGC, HE protein, chaperone; 2.28A {Homo sapiens} Length = 268 | Back alignment and structure |
|---|
| >3peh_A Endoplasmin homolog; structural genomics, structural genomics consortium, SGC, HE protein, chaperone, ATP binding; HET: IBD; 2.75A {Plasmodium falciparum 3D7} PDB: 3pej_A* Length = 281 | Back alignment and structure |
|---|
| >3peh_A Endoplasmin homolog; structural genomics, structural genomics consortium, SGC, HE protein, chaperone, ATP binding; HET: IBD; 2.75A {Plasmodium falciparum 3D7} PDB: 3pej_A* Length = 281 | Back alignment and structure |
|---|
| >1qy5_A Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: NEC; 1.75A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1qy8_A* 1qye_A* 1u0y_A* 1yt2_A* Length = 269 | Back alignment and structure |
|---|
| >1hk7_A Heat shock protein HSP82; ATPase, chaperone; 2.5A {Saccharomyces cerevisiae} SCOP: d.14.1.8 Length = 288 | Back alignment and structure |
|---|
| >1y6z_A Heat shock protein, putative; chaperone, structural genomics, structural genom consortium, SGC, unknown function; 1.88A {Plasmodium falciparum} Length = 263 | Back alignment and structure |
|---|
| >2gq0_A Chaperone protein HTPG; molecular chaperone, HSP90, E. coli, hydrolase; 1.90A {Escherichia coli} Length = 303 | Back alignment and structure |
|---|
| >1usu_A Heat shock protein HSP82; chaperone/complex, chaperone, activator, HSP90; 2.15A {Saccharomyces cerevisiae} SCOP: d.14.1.8 PDB: 1usv_A Length = 260 | Back alignment and structure |
|---|
| >2wer_A ATP-dependent molecular chaperone HSP82; ATPase, ATP-binding, phosphoprotein, stress respo nucleotide-binding; HET: RDC; 1.60A {Saccharomyces cerevisiae} PDB: 2weq_A* 2wep_A* 1zwh_A* 1zw9_A* 2fxs_A* 3c11_A* 3c0e_A* 2yge_A* 2ygf_A* 2akp_A Length = 220 | Back alignment and structure |
|---|
| >3o0i_A HSP90AA1 protein; HSP90 heat-shock proteins, chaperone-inhibitor complex; HET: P54; 1.47A {Homo sapiens} PDB: 2fwz_A* 2fwy_A* 2h55_A* Length = 256 | Back alignment and structure |
|---|
| >1yc1_A HSP 86, heat shock protein HSP 90-alpha; cell-cycle, cancer, drug design, cell cycle; HET: 4BC; 1.70A {Homo sapiens} SCOP: d.122.1.1 PDB: 1yc3_A* 1yc4_A* Length = 264 | Back alignment and structure |
|---|
| >3t0h_A Heat shock protein HSP 90-alpha; chaperone, ATPase; 1.20A {Homo sapiens} PDB: 3r4m_A 3t0z_A* 3t10_A* 3t1k_A* 3t2s_A* 1uyl_A 1uy7_A* 1uy8_A* 1uy9_A* 1uyc_A* 1uyd_A* 1uye_A* 1uyf_A* 1uyg_A* 1uyh_A* 1uyk_A* 1uy6_A 2cdd_A* 2uwd_A* 2vci_A* ... Length = 228 | Back alignment and structure |
|---|
| >2gqp_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, ligand, NECA, NPCA, adenosine; HET: PA7 PG4 1PE; 1.50A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1tc0_A* 1tbw_A* 1u0z_A* 1u2o_A* 1ysz_A* 1yt0_A* 1yt1_A* 2exl_A* 2fyp_A* 2gfd_A* 1tc6_A* 2h8m_A* 2hch_A* 2hg1_A* 3o2f_A* 2esa_A* Length = 236 | Back alignment and structure |
|---|
| >3nmq_A Heat shock protein HSP 90-beta; ATPase, chaperone-chaperone inhibitor complex; HET: 7PP; 2.20A {Homo sapiens} Length = 239 | Back alignment and structure |
|---|
| >2ior_A Chaperone protein HTPG; heat shock protein, HSP90; HET: ADP; 1.65A {Escherichia coli} Length = 235 | Back alignment and structure |
|---|
| >3ied_A Heat shock protein; HSP90, chaperone, structural genomics, structura genomics consortium, SGC, stress response; HET: AN2; 2.01A {Plasmodium falciparum} Length = 272 | Back alignment and structure |
|---|
| >1sf8_A Chaperone protein HTPG; four helix bundle dimerization interface, exposed amphipathic helix, three stranded beta sheet; 2.60A {Escherichia coli} SCOP: d.271.1.1 Length = 126 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 762 | |||
| 2cg9_A | 677 | ATP-dependent molecular chaperone HSP82; chaperone | 100.0 | |
| 2o1u_A | 666 | Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, | 100.0 | |
| 2ioq_A | 624 | Chaperone protein HTPG; heat shock protein, HSP90; | 100.0 | |
| 1y4s_A | 559 | Chaperone protein HTPG; HSP90, molecular chaperone | 100.0 | |
| 3hjc_A | 444 | Heat shock protein 83-1; sleeping sickness, struct | 100.0 | |
| 3q6m_A | 448 | Heat shock protein HSP 90-alpha; three domains, tr | 100.0 | |
| 2cge_A | 405 | ATP-dependent molecular chaperone HSP82; chaperone | 100.0 | |
| 1hk7_A | 288 | Heat shock protein HSP82; ATPase, chaperone; 2.5A | 100.0 | |
| 2gq0_A | 303 | Chaperone protein HTPG; molecular chaperone, HSP90 | 100.0 | |
| 3pry_A | 268 | Heat shock protein HSP 90-beta; structural genomic | 100.0 | |
| 1usu_A | 260 | Heat shock protein HSP82; chaperone/complex, chape | 100.0 | |
| 1y6z_A | 263 | Heat shock protein, putative; chaperone, structura | 100.0 | |
| 3peh_A | 281 | Endoplasmin homolog; structural genomics, structur | 100.0 | |
| 1qy5_A | 269 | Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: N | 100.0 | |
| 3ied_A | 272 | Heat shock protein; HSP90, chaperone, structural g | 100.0 | |
| 3nmq_A | 239 | Heat shock protein HSP 90-beta; ATPase, chaperone- | 100.0 | |
| 3o0i_A | 256 | HSP90AA1 protein; HSP90 heat-shock proteins, chape | 100.0 | |
| 3t0h_A | 228 | Heat shock protein HSP 90-alpha; chaperone, ATPase | 100.0 | |
| 2gqp_A | 236 | Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, | 100.0 | |
| 2wer_A | 220 | ATP-dependent molecular chaperone HSP82; ATPase, A | 100.0 | |
| 1yc1_A | 264 | HSP 86, heat shock protein HSP 90-alpha; cell-cycl | 100.0 | |
| 2ior_A | 235 | Chaperone protein HTPG; heat shock protein, HSP90; | 100.0 | |
| 1sf8_A | 126 | Chaperone protein HTPG; four helix bundle dimeriza | 99.95 | |
| 1b63_A | 333 | MUTL; DNA mismatch repair, ATPase; HET: ANP; 1.90A | 99.7 | |
| 1h7s_A | 365 | PMS1 protein homolog 2; DNA repair, GHL ATPase, mi | 99.55 | |
| 3h4l_A | 367 | DNA mismatch repair protein PMS1; ATP binding, DNA | 99.46 | |
| 3na3_A | 348 | DNA mismatch repair protein MLH1; MUTL protein hom | 99.33 | |
| 3fv5_A | 201 | DNA topoisomerase 4 subunit B; topoisomerase IV B | 98.9 | |
| 1mu5_A | 471 | Type II DNA topoisomerase VI subunit B; GHKL ATPas | 98.88 | |
| 2zbk_B | 530 | Type 2 DNA topoisomerase 6 subunit B; DNA binding | 98.8 | |
| 1kij_A | 390 | DNA gyrase subunit B; topoisomerase, gyrase B-coum | 98.76 | |
| 2q2e_B | 621 | Type 2 DNA topoisomerase 6 subunit B; DNA-binding, | 98.6 | |
| 1s16_A | 390 | Topoisomerase IV subunit B; two-domain protein com | 98.59 | |
| 1ei1_A | 391 | DNA gyrase B, GYRB; ATPase domain, dimer, isomeras | 98.43 | |
| 1zxm_A | 400 | TOPO IIA ATPase, DNA topoisomerase II, alpha isozy | 98.37 | |
| 4duh_A | 220 | DNA gyrase subunit B; structure-based drug design, | 98.36 | |
| 3cwv_A | 369 | DNA gyrase, B subunit, truncated; structural genom | 98.36 | |
| 4emv_A | 226 | DNA topoisomerase IV, B subunit; protein-inhibitor | 98.3 | |
| 3lnu_A | 408 | Topoisomerase IV subunit B; PARE, ATP-binding, nuc | 98.04 | |
| 3ttz_A | 198 | DNA gyrase subunit B; protein-inhibitor complex, A | 97.87 | |
| 1pvg_A | 418 | DNA topoisomerase II; GHKL ATPase domain; HET: DNA | 97.62 | |
| 1ysr_A | 150 | Sensor-type histidine kinase PRRB; ATP-binding dom | 97.3 | |
| 4ew8_A | 268 | Sensor protein DIVL; signal transduction, two-comp | 97.26 | |
| 1id0_A | 152 | PHOQ histidine kinase; PHOQ/PHOP, signal transduct | 97.22 | |
| 1th8_A | 145 | Anti-sigma F factor; SPOIIAB, SPOIIAA, anti-ANTI-s | 97.2 | |
| 3jz3_A | 222 | Sensor protein QSEC; helix-turn-helix, kinase doma | 97.2 | |
| 3d36_A | 244 | Sporulation kinase B; GHKL ATPase, four helix bund | 97.19 | |
| 3ehh_A | 218 | Sensor kinase (YOCF protein); four-helix bundle, G | 97.19 | |
| 2btz_A | 394 | Pyruvate dehydrogenase kinase isoenzyme 2; GHKL mo | 97.18 | |
| 1i58_A | 189 | Chemotaxis protein CHEA; beta-alpha sandwich, sign | 97.18 | |
| 2e0a_A | 394 | Pyruvate dehydrogenase kinase isozyme 4; PDK4, ATP | 97.1 | |
| 2q8g_A | 407 | [pyruvate dehydrogenase [lipoamide]] kinase isozy; | 97.08 | |
| 3sl2_A | 177 | Sensor histidine kinase YYCG; ATP binding, intact | 96.99 | |
| 1y8o_A | 419 | [pyruvate dehydrogenase [lipoamide]] kinase isozy; | 96.99 | |
| 1gkz_A | 388 | [3-methyl-2-oxobutanoate dehydrogenase [lipoamide] | 96.82 | |
| 1bxd_A | 161 | ENVZ(290-450), protein (osmolarity sensor protein | 96.81 | |
| 3zxo_A | 129 | Redox sensor histidine kinase response regulator; | 96.71 | |
| 1b3q_A | 379 | Protein (chemotaxis protein CHEA); histine kinase, | 96.58 | |
| 4gfh_A | 1177 | DNA topoisomerase 2; topoisomerase, protein-DNA co | 96.56 | |
| 1r62_A | 160 | Nitrogen regulation protein NR(II); PII, histidine | 96.51 | |
| 3a0y_A | 152 | Sensor protein; ATP-LID, kinase, phosphoprotein, t | 96.47 | |
| 2c2a_A | 258 | Sensor histidine kinase; phosphotransfer, PHOQ, se | 96.23 | |
| 3ehg_A | 128 | Sensor kinase (YOCF protein); GHL ATPase domain, t | 95.93 | |
| 3zxq_A | 124 | Hypoxia sensor histidine kinase response regulato; | 95.33 | |
| 3a0r_A | 349 | Sensor protein; four helix bundle, PAS fold, kinas | 94.03 | |
| 4fpp_A | 247 | Phosphotransferase; four helix bundle, bergerat fo | 87.02 |
| >2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-171 Score=1475.89 Aligned_cols=654 Identities=51% Similarity=0.851 Sum_probs=553.2
Q ss_pred ccccchhhcHHHHHHHHHHcCCCCchhHHHHhhhcHHHHHHHHHhhhccCccccCCCCCCccEEEEEEeCCccEEEEEeC
Q 004309 77 AEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDR 156 (762)
Q Consensus 77 ~e~~~Fqae~~~ll~ll~~sLYs~~~ifLRELIqNA~DA~~k~r~~~l~~~~~~g~~~~~~~~I~I~~d~~~~~L~I~DN 156 (762)
.++|+||||+++||+||+++||||+++|||||||||+||++|+||+++++++++ ...+++.|+|.+++++++|+|+||
T Consensus 3 ~e~~~Fqae~~~Ll~li~~sLYsnkeifLRELIsNA~DA~~k~r~~~ltd~~~~--~~~~~~~I~I~~d~~~~~I~I~Dn 80 (677)
T 2cg9_A 3 SETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQL--ETEPDLFIRITPKPEQKVLEIRDS 80 (677)
T ss_dssp CEEEECCCCHHHHHHHHHHSCCSCTTHHHHHHHHHHHHHHHHHHHHTSSCTTTT--TTCCCCCEEEEEEGGGTEEEEEEC
T ss_pred ccceehhhhHHHHHHHHHHhCCCCchHHHHHHhhCHHHHHHHHHHHhccChhhc--cCCCCcEEEEEEeCCCCEEEEEEC
Confidence 478999999999999999999999999999999999999999999999999877 566778999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHhcccchhHHHhhhccCCCCccccccccceeeeeeccEEEEEEeeCCCeeeEEEEcCCCceEEEe
Q 004309 157 GIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISE 236 (762)
Q Consensus 157 GiGMt~eeL~~~LgtIa~Sg~~~f~~~~~~~~~~~~IGqFGIGFyS~FmVadkV~V~Sk~~~~~~~~W~s~~~~~f~I~~ 236 (762)
|+|||++||.++|+|||+||+++|+++++.+.+...||||||||||+||||++|+|+|+++++.++.|+++|++.|+|.+
T Consensus 81 GiGMt~edl~~~l~tIA~Sgt~~f~~kl~~~~d~~~IGqFGvGFySaf~vadkV~V~Sk~~~~~~~~W~s~g~~~~ti~~ 160 (677)
T 2cg9_A 81 GIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTL 160 (677)
T ss_dssp SCCCCHHHHHGGGSSSSSCTTHHHHSCCCSSCCCCCCCCTTCTTGGGGGTEEEEEEEEECTTSCEEEEEECSSSEEEEEE
T ss_pred CCCCCHHHHHHHHHhHhccccHHHHHhhhcccchhhcCCCCchhHHHhhcCcEEEEEEccCCCceEEEEEcCCceEEEee
Confidence 99999999999999999999999998887556778999999999999999999999999988789999999999999998
Q ss_pred CCCCCCCCCCeEEEEEecccccccccHHHHHHHHHHHcCCCCcceEEeeeeeeeccCCCCCCCCchh-HHhhhhhhhhhc
Q 004309 237 DTWNEPLGRGTEIRLHLRDEAGEYLEESKLKELVKKYSEFINFPIYIWASKEVDVDVPTDEDDSSDE-EEKAEKEEETEK 315 (762)
Q Consensus 237 ~~~~~~~~~GT~I~L~Lk~~~~e~l~~~~l~~likkys~fi~~PI~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 315 (762)
++.+...++||+|+|||++++.+|++.++|+++|++||+||+|||+++..++.+.+++++++++++. .+..++++.+++
T Consensus 161 ~~~~~~~~~GT~I~L~Lk~d~~e~l~~~~i~~lvkkys~fi~~PI~l~~~k~~~~~~~~~e~~~~~~~~~~e~~~~~~~~ 240 (677)
T 2cg9_A 161 DEVNERIGRGTILRLFLKDDQLEYLEEKRIKEVIKRHSEFVAYPIQLVVTKEVEKEVPIPEEEKKDEEKKDEEKKDEDDK 240 (677)
T ss_dssp CCSSCCCSSEEEEEEEECTTGGGGGCHHHHHHHHHHHSTTCSSCEEECCCCCCCCC------------------------
T ss_pred cCCCCCCCCCeEEEEEEcchhhccccHHHHHHHHHHHHhhCCCCeEEeeccccccCcCcchhhhcccccccccccccccc
Confidence 5433466899999999999999999999999999999999999999987665444433222110000 000000000001
Q ss_pred ccCCCCccccccccCCCcccceecccceeeeccCCcccccCCCCCCHHHHHHHHHHhhcCCCCCCCccceecccccccee
Q 004309 316 SESESEDEDEDSEKKPKTKTVKETTFEWELLNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEF 395 (762)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~k~~~~~~~~~e~iN~~~piW~r~~~evt~eey~~Fyk~~~~~~~~~~PL~~~h~~~eg~~~f 395 (762)
+.+. +++++++++++++|++++++++|++||+++|||+|+|++||+|||.+|||+++++| ++||+|+||++||+++|
T Consensus 241 ~~~~-~~~~~~~~~~~~~k~~~~~~~e~e~iN~~~plW~r~~~eit~eeY~~FYk~l~~d~--~~pl~~~H~~veg~~~~ 317 (677)
T 2cg9_A 241 KPKL-EEVDEEEEKKPKTKKVKEEVQEIEELNKTKPLWTRNPSDITQEEYNAFYKSISNDW--EDPLYVKHFSVEGQLEF 317 (677)
T ss_dssp ----------------------CCCCCBCCCCCCCCTTSSCGGGCCTTTHHHHHHHHTTCC--SCCSEEEEEEECSSSCE
T ss_pred cccc-ccccchhhhcccccccccccccceecccCCCCcccCcccCCHHHHHHHHHHhcCCC--CCchheEEecccccceE
Confidence 1111 11111111345667777888999999999999999999999999999999999999 99999999999999999
Q ss_pred eEEEEecCCCCcchhhhhhcccccceEEEeeeccccccccccchhhhccccceecCCCCCCccchHhhhcchHHHHHHHH
Q 004309 396 KAVLFVPPKAPHDLYESYYNTNKANLKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKK 475 (762)
Q Consensus 396 ~~llyiP~~~p~~~~~~~~~~~~~~ikLYvrrVfI~d~~~~llP~yl~Fv~GVVDS~dLpLNvSRE~LQ~~~~l~~I~k~ 475 (762)
+||||||+++|+|+|++ ...+++|+||||||||||+|++|||+||+||||||||+|||||||||+||+|++|++||++
T Consensus 318 ~~lLyiP~~ap~d~~~~--~~~~~~ikLYv~rVfI~d~~~~llP~yL~FvkGVVDS~DLpLNvSRE~LQ~~~~lk~I~~~ 395 (677)
T 2cg9_A 318 RAILFIPKRAPFDLFES--KKKKNNIKLYVRRVFITDEAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKN 395 (677)
T ss_dssp EEEEEECSSCCC-----------CCSEEEETTEEEEECSTTTSCGGGTTCEEEEEESSCCCCBTTTBCCCHHHHHHHHHH
T ss_pred EEEEEEcCCCchhhhhh--hhccCCeEEEEeeeEeecChhhhchHHHHHheeecccCCCCcccCHHHhccCHHHHHHHHH
Confidence 99999999999999974 1457899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCcCCCCcccccccCCCchhhhHHHHHHHHHhHHhhhhcccCHHhHHHHhhhccceecCCCCc
Q 004309 476 LIRKALDMIRKIAEEDPDESTGKDKKDVEKFSDDDDKKGQYTKFWNEFGKSIKLGIIEDAANRNRLAKLLRFESTKSDGK 555 (762)
Q Consensus 476 l~~k~l~~l~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~f~~~f~~~lK~G~~eD~~nr~~l~~LLrf~ss~~~~~ 555 (762)
|++|++++|.+||++ +++|++||++||++||+|+++|+.||++|++||||+||+++++
T Consensus 396 l~kkvl~~l~~la~~----------------------~e~y~~f~~~fg~~lK~G~~eD~~nr~~l~~llrf~ss~~~~~ 453 (677)
T 2cg9_A 396 IVKKLIEAFNEIAED----------------------SEQFEKFYSAFSKNIKLGVHEDTQNRAALAKLLRYNSTKSVDE 453 (677)
T ss_dssp HHHHHHHHHHHHHSC----------------------SHHHHHHHHHHHHHHHHHHHHCSSSHHHHHTTCCBEESSCTTS
T ss_pred HHHHHHHHHHHHHhC----------------------HHHHHHHHHHHhHHhhhhhccCHHHHHHHHhheEeeecCCCCc
Confidence 999999999999976 4699999999999999999999999999999999999997778
Q ss_pred ccCHHHHHhhccCCCceEEEEeCCCHHHHhcChhHHHHHhCCCeEEecCCCCcHHHHHHhhhcCCcceEeeccccccCCC
Q 004309 556 LTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGK 635 (762)
Q Consensus 556 ~~sL~eYv~rmke~Q~~IYY~~g~s~~~~~~SP~lE~~~~kg~EVL~l~dpiDE~~i~~L~ef~gkkf~~V~k~~~~l~~ 635 (762)
++||++||+|||++|+.|||++|+|++++++|||+|.|++||||||||++|||||||++|.+|+|++|++|+++ ++|++
T Consensus 454 ~~sL~eYv~rmke~Q~~IyY~t~~s~~~~~~sp~~E~~~~kg~EVl~l~~~iDe~~~~~l~e~~gk~~~~v~k~-l~l~~ 532 (677)
T 2cg9_A 454 LTSLTDYVTRMPEHQKNIYYITGESLKAVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQLKEFEGKTLVDITKD-FELEE 532 (677)
T ss_dssp CBCSTTHHHHSCTTCCEEEEEECSCSTTTTTCGGGHHHHTTTCCEEEECSHHHHHHHGGGSCBTTBEEECSCCC-CCSCS
T ss_pred eeeHHHHHHhccccCceEEEEeCCCHHHHHhCcHHHHHHhCCceEEEeCCchHHHHHHHHHHhCCceEEEeecc-ccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999 98874
Q ss_pred Cc--ch--HHHHHHHHHHHHHHHhhcccCCceeEEEeeccCCCCeEEEecCCcchHHHHHHHHHhcccccccccccCCce
Q 004309 636 DT--KD--KELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKR 711 (762)
Q Consensus 636 ~e--k~--~~~~~~~~~L~~~~k~~L~~~~V~~V~vS~RL~~sP~~lv~~e~g~s~~MeRimkaq~~~~~~~~~~~~~kk 711 (762)
++ ++ ++.+++|++|++|||++|+++ |.+|++|.||++||||||++++|||++|+|||++|+++++.+..++..++
T Consensus 533 ~e~~~~~~~~~~~~~~~L~~~~k~~L~~~-v~~V~~s~rl~~sP~~lv~~~~~~s~~merimka~~~~d~~~~~~~~~k~ 611 (677)
T 2cg9_A 533 TDEEKAEREKEIKEYEPLTKALKEILGDQ-VEKVVVSYKLLDAPAAIRTGQFGWSANMERIMKAQALRDSSMSSYMSSKK 611 (677)
T ss_dssp STTSSTTHHHHHGGGHHHHHHHHHTTCSS-CSCEECCSSCSSSCEEEECCTTSCCHHHHHHHTTCC-------------C
T ss_pred chhhhhhhhhhHHHHHHHHHHHHHhcCCc-ceEEEEeccCCCCCEEEEeCcccccHHHHHHHHHhhccccccccccccCc
Confidence 33 22 556778999999999999999 99999999999999999999999999999999999876554445678899
Q ss_pred eEEECCCChhHHHHHHhhcCC-chhh-----h---------ccCCCCCCHHHHHHHHHHhhcCCC
Q 004309 712 VLEINPRHPIIKELRERVVKD-PEVE-----F---------FSHFLLTGKDDFSNPNSMYTSLKI 761 (762)
Q Consensus 712 iLEINP~HPlIk~L~~~~~~d-~~d~-----~---------~sG~~leDp~~fa~ri~~~l~~~~ 761 (762)
+|||||+||||++|+++...| +++. . ++||.++||+.|++||++||.+++
T Consensus 612 ~LeiNp~hpli~~L~~~~~~d~~~~~~~~~~~~~Lyd~All~~G~~l~dp~~f~~ri~~ll~~~l 676 (677)
T 2cg9_A 612 TFEISPKSPIIKELKKRVDEGGAQDKTVKDLTKLLYETALLTSGFSLDEPTSFASRINRLISLGL 676 (677)
T ss_dssp EEEECTTCHHHHHHHHHHHTCCSSCSSSSTTHHHHHHHHHHHTTCCCSSTTHHHHHHHHTSSSSC
T ss_pred eEEEcCCCHHHHHHHHhhhccccCHHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHhc
Confidence 999999999999999876543 2211 1 889999999999999999999876
|
| >2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A | Back alignment and structure |
|---|
| >2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A | Back alignment and structure |
|---|
| >1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A | Back alignment and structure |
|---|
| >3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major} | Back alignment and structure |
|---|
| >3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A | Back alignment and structure |
|---|
| >2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1hk7_A Heat shock protein HSP82; ATPase, chaperone; 2.5A {Saccharomyces cerevisiae} SCOP: d.14.1.8 | Back alignment and structure |
|---|
| >2gq0_A Chaperone protein HTPG; molecular chaperone, HSP90, E. coli, hydrolase; 1.90A {Escherichia coli} | Back alignment and structure |
|---|
| >3pry_A Heat shock protein HSP 90-beta; structural genomics, structural genomics consortium, SGC, HE protein, chaperone; 2.28A {Homo sapiens} SCOP: d.14.1.8 | Back alignment and structure |
|---|
| >1usu_A Heat shock protein HSP82; chaperone/complex, chaperone, activator, HSP90; 2.15A {Saccharomyces cerevisiae} SCOP: d.14.1.8 PDB: 1usv_A | Back alignment and structure |
|---|
| >1y6z_A Heat shock protein, putative; chaperone, structural genomics, structural genom consortium, SGC, unknown function; 1.88A {Plasmodium falciparum} | Back alignment and structure |
|---|
| >3peh_A Endoplasmin homolog; structural genomics, structural genomics consortium, SGC, HE protein, chaperone, ATP binding; HET: IBD; 2.75A {Plasmodium falciparum 3D7} PDB: 3pej_A* | Back alignment and structure |
|---|
| >1qy5_A Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: NEC; 1.75A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1qy8_A* 1qye_A* 1u0y_A* 1yt2_A* | Back alignment and structure |
|---|
| >3ied_A Heat shock protein; HSP90, chaperone, structural genomics, structura genomics consortium, SGC, stress response; HET: AN2; 2.01A {Plasmodium falciparum} | Back alignment and structure |
|---|
| >3nmq_A Heat shock protein HSP 90-beta; ATPase, chaperone-chaperone inhibitor complex; HET: 7PP; 2.20A {Homo sapiens} SCOP: d.122.1.1 | Back alignment and structure |
|---|
| >3o0i_A HSP90AA1 protein; HSP90 heat-shock proteins, chaperone-inhibitor complex; HET: P54; 1.47A {Homo sapiens} PDB: 2fwz_A* 2fwy_A* 2h55_A* | Back alignment and structure |
|---|
| >3t0h_A Heat shock protein HSP 90-alpha; chaperone, ATPase; 1.20A {Homo sapiens} SCOP: d.122.1.1 PDB: 3r4m_A 3t0z_A* 3t10_A* 3t1k_A* 3t2s_A* 1uyl_A 1uy7_A* 1uy8_A* 1uy9_A* 1uyc_A* 1uyd_A* 1uye_A* 1uyf_A* 1uyg_A* 1uyh_A* 1uyk_A* 1uy6_A 2cdd_A* 2uwd_A* 2vci_A* ... | Back alignment and structure |
|---|
| >2gqp_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, ligand, NECA, NPCA, adenosine; HET: PA7 PG4 1PE; 1.50A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1tc0_A* 1tbw_A* 1u0z_A* 1u2o_A* 1ysz_A* 1yt0_A* 1yt1_A* 2exl_A* 2fyp_A* 2gfd_A* 1tc6_A* 2h8m_A* 2hch_A* 2hg1_A* 3o2f_A* 2esa_A* | Back alignment and structure |
|---|
| >2wer_A ATP-dependent molecular chaperone HSP82; ATPase, ATP-binding, phosphoprotein, stress respo nucleotide-binding; HET: RDC; 1.60A {Saccharomyces cerevisiae} PDB: 2weq_A* 2wep_A* 1zwh_A* 1zw9_A* 2fxs_A* 3c11_A* 3c0e_A* 2yge_A* 2ygf_A* 2akp_A | Back alignment and structure |
|---|
| >1yc1_A HSP 86, heat shock protein HSP 90-alpha; cell-cycle, cancer, drug design, cell cycle; HET: 4BC; 1.70A {Homo sapiens} SCOP: d.122.1.1 PDB: 1yc3_A* 1yc4_A* | Back alignment and structure |
|---|
| >2ior_A Chaperone protein HTPG; heat shock protein, HSP90; HET: ADP; 1.65A {Escherichia coli} | Back alignment and structure |
|---|
| >1sf8_A Chaperone protein HTPG; four helix bundle dimerization interface, exposed amphipathic helix, three stranded beta sheet; 2.60A {Escherichia coli} SCOP: d.271.1.1 | Back alignment and structure |
|---|
| >1b63_A MUTL; DNA mismatch repair, ATPase; HET: ANP; 1.90A {Escherichia coli K12} SCOP: d.14.1.3 d.122.1.2 PDB: 1nhh_A* 1nhi_A* 1bkn_A 1nhj_A* 1b62_A* | Back alignment and structure |
|---|
| >1h7s_A PMS1 protein homolog 2; DNA repair, GHL ATPase, mismatch repair, HNPCC; 1.95A {Homo sapiens} SCOP: d.14.1.3 d.122.1.2 PDB: 1h7u_A* 1ea6_A* | Back alignment and structure |
|---|
| >3h4l_A DNA mismatch repair protein PMS1; ATP binding, DNA repair, DNA damage, nucleus, phosphop DNA binding protein, protein binding; HET: DNA ANP; 2.50A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3na3_A DNA mismatch repair protein MLH1; MUTL protein homolog 1, DNA damag repair, structural genomics consortium, SGC, protein bindin; HET: DNA ATP; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
| >3fv5_A DNA topoisomerase 4 subunit B; topoisomerase IV B subunit complex, antibiotic resistance, ATP-binding, nucleotide-binding; HET: DNA 1EU; 1.80A {Escherichia coli} PDB: 1s14_A* | Back alignment and structure |
|---|
| >1mu5_A Type II DNA topoisomerase VI subunit B; GHKL ATPase, helix two-turns helix; 2.00A {Sulfolobus shibatae} SCOP: a.156.1.3 d.14.1.3 d.122.1.2 PDB: 1mx0_A* 1z5b_A* 1z5a_A* 1z59_A* 1z5c_A* 2hkj_A* | Back alignment and structure |
|---|
| >2zbk_B Type 2 DNA topoisomerase 6 subunit B; DNA binding protein, decatenation, ATPase, drug design, DNA-binding, magnesium, metal-binding; HET: RDC; 3.56A {Sulfolobus shibatae} | Back alignment and structure |
|---|
| >1kij_A DNA gyrase subunit B; topoisomerase, gyrase B-coumarin complex, isomerase; HET: DNA NOV; 2.30A {Thermus thermophilus} SCOP: d.14.1.3 d.122.1.2 | Back alignment and structure |
|---|
| >2q2e_B Type 2 DNA topoisomerase 6 subunit B; DNA-binding, SPO11, ATPase; 4.00A {Methanosarcina mazei} | Back alignment and structure |
|---|
| >1s16_A Topoisomerase IV subunit B; two-domain protein complexed with ADPNP; HET: ANP; 2.10A {Escherichia coli} SCOP: d.14.1.3 d.122.1.2 | Back alignment and structure |
|---|
| >1ei1_A DNA gyrase B, GYRB; ATPase domain, dimer, isomerase; HET: DNA ANP; 2.30A {Escherichia coli} SCOP: d.14.1.3 d.122.1.2 | Back alignment and structure |
|---|
| >1zxm_A TOPO IIA ATPase, DNA topoisomerase II, alpha isozyme; GHKL nucleotide-binding fold; HET: DNA ANP; 1.87A {Homo sapiens} PDB: 1zxn_A* | Back alignment and structure |
|---|
| >4duh_A DNA gyrase subunit B; structure-based drug design, antibacterial, DNA gyrase B, GY isomerase-isomerase inhibitor complex; HET: DNA RLI; 1.50A {Escherichia coli} PDB: 1aj6_A* 1kzn_A* 3g7e_A* | Back alignment and structure |
|---|
| >3cwv_A DNA gyrase, B subunit, truncated; structural genomics, unknown function, B-subunit binding, isomerase, nucleotide-binding, topoisomerase; HET: DNA; 1.95A {Myxococcus xanthus} | Back alignment and structure |
|---|
| >4emv_A DNA topoisomerase IV, B subunit; protein-inhibitor complex, ATP binding, structure-based drug antimicrobial, virtual screen; HET: DNA 0R9; 1.70A {Streptococcus pneumoniae GA47373} PDB: 4em7_A* | Back alignment and structure |
|---|
| >3lnu_A Topoisomerase IV subunit B; PARE, ATP-binding, nucleotide-BI topoisomerase; 2.20A {Xanthomonas oryzae PV} PDB: 3lps_A* | Back alignment and structure |
|---|
| >3ttz_A DNA gyrase subunit B; protein-inhibitor complex, ATP-binding, structure-based drug antimicrobial, isomerase-isomerase inhibitor complex; HET: DNA 07N; 1.63A {Staphylococcus aureus} PDB: 3u2d_A* 3u2k_A* 3g75_A* 3g7b_A* | Back alignment and structure |
|---|
| >1pvg_A DNA topoisomerase II; GHKL ATPase domain; HET: DNA ANP; 1.80A {Saccharomyces cerevisiae} SCOP: d.14.1.3 d.122.1.2 PDB: 1qzr_A* | Back alignment and structure |
|---|
| >1ysr_A Sensor-type histidine kinase PRRB; ATP-binding domain, structural genomics, mycobacterium tuberculosis structural proteomics project; 1.78A {Mycobacterium tuberculosis} SCOP: d.122.1.3 PDB: 1ys3_A | Back alignment and structure |
|---|
| >4ew8_A Sensor protein DIVL; signal transduction, two-component regulatory system, hiska GHKL domain, structural genomics; 2.50A {Caulobacter crescentus} | Back alignment and structure |
|---|
| >1id0_A PHOQ histidine kinase; PHOQ/PHOP, signal transduction, transferase; HET: ANP; 1.60A {Escherichia coli} SCOP: d.122.1.3 PDB: 3cgz_A 3cgy_A | Back alignment and structure |
|---|
| >1th8_A Anti-sigma F factor; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: d.122.1.3 PDB: 1thn_A* 1til_A* 1l0o_A* 1tid_A* | Back alignment and structure |
|---|
| >3jz3_A Sensor protein QSEC; helix-turn-helix, kinase domain, ATP-binding, cell inner MEM cell membrane, kinase, membrane, nucleotide-binding; 2.50A {Escherichia coli} | Back alignment and structure |
|---|
| >3d36_A Sporulation kinase B; GHKL ATPase, four helix bundle, class I two-component histidine kinase, phosphoprotein; HET: ADP; 2.03A {Geobacillus stearothermophilus} | Back alignment and structure |
|---|
| >3ehh_A Sensor kinase (YOCF protein); four-helix bundle, GHL ATPase domain, transferase; HET: MSE ADP; 2.10A {Bacillus subtilis} PDB: 3ehj_A* 3gie_A* 3gif_A* 3gig_A* 3ehf_A* | Back alignment and structure |
|---|
| >2btz_A Pyruvate dehydrogenase kinase isoenzyme 2; GHKL motif regulation, transferase; 2.2A {Homo sapiens} PDB: 2bu2_A* 2bu5_A* 2bu6_A* 2bu7_A* 2bu8_A* 3crk_A* 1jm6_A* 3crl_A* | Back alignment and structure |
|---|
| >1i58_A Chemotaxis protein CHEA; beta-alpha sandwich, signaling protein, transferase; HET: ACP ADP; 1.60A {Thermotoga maritima} SCOP: d.122.1.3 PDB: 1i59_A* 1i5a_A* 1i5b_A* 1i5c_A* 1i5d_A* | Back alignment and structure |
|---|
| >2e0a_A Pyruvate dehydrogenase kinase isozyme 4; PDK4, ATP-binding, structural genomics, NPPSFA, NATI project on protein structural and functional analyses; HET: ANP; 1.86A {Homo sapiens} PDB: 2zdx_A* 2zdy_A* 2zkj_A* 3d2r_A* | Back alignment and structure |
|---|
| >2q8g_A [pyruvate dehydrogenase [lipoamide]] kinase isozy; GHKL ATPase/kinase family, pyruvate dehydrogenase complex, mitochondrial kinase; HET: AZX; 1.90A {Homo sapiens} PDB: 2q8f_A* 2q8h_A | Back alignment and structure |
|---|
| >3sl2_A Sensor histidine kinase YYCG; ATP binding, intact ATP, bergerat fold, TR; HET: ATP; 1.61A {Bacillus subtilis} | Back alignment and structure |
|---|
| >1y8o_A [pyruvate dehydrogenase [lipoamide]] kinase isozy; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED ADP; 2.48A {Homo sapiens} SCOP: a.29.5.1 d.122.1.4 PDB: 1y8n_A* 1y8p_A* 2pnr_A* 2q8i_A* | Back alignment and structure |
|---|
| >1gkz_A [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase; transferase, mitochondrial protein kinase, potassium; HET: ADP; 2.2A {Rattus norvegicus} SCOP: a.29.5.1 d.122.1.4 PDB: 1gjv_A 1gkx_A* | Back alignment and structure |
|---|
| >1bxd_A ENVZ(290-450), protein (osmolarity sensor protein (ENVZ)); histidine kinase, osmosensor, His-Asp phosphorelay system, signal transduction; HET: ANP; NMR {Escherichia coli BL21} SCOP: d.122.1.3 | Back alignment and structure |
|---|
| >3zxo_A Redox sensor histidine kinase response regulator; transferase; HET: MSE; 1.90A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >1b3q_A Protein (chemotaxis protein CHEA); histine kinase, signal transduction, multi-domai protein, transferase; 2.60A {Thermotoga maritima} SCOP: a.30.2.1 b.40.7.1 d.122.1.3 PDB: 2ch4_A* 3ur1_A | Back alignment and structure |
|---|
| >4gfh_A DNA topoisomerase 2; topoisomerase, protein-DNA complex, DNA supercoiling, DNA replication; HET: DNA PTR TSP ANP; 4.41A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1r62_A Nitrogen regulation protein NR(II); PII, histidine kinase, two component system, transfera; 1.60A {Escherichia coli} SCOP: d.122.1.3 | Back alignment and structure |
|---|
| >3a0y_A Sensor protein; ATP-LID, kinase, phosphoprotein, transferase, two-component regulatory system; 1.57A {Thermotoga maritima} PDB: 3a0t_A* 3a0x_A 3a0w_A 3a0z_A | Back alignment and structure |
|---|
| >2c2a_A Sensor histidine kinase; phosphotransfer, PHOQ, selenomethionyl MAD, two-component systems, transferase; HET: ADP; 1.9A {Thermotoga maritima} SCOP: a.30.2.1 d.122.1.3 PDB: 3dge_A* | Back alignment and structure |
|---|
| >3ehg_A Sensor kinase (YOCF protein); GHL ATPase domain, transferase; HET: ATP; 1.74A {Bacillus subtilis} | Back alignment and structure |
|---|
| >3zxq_A Hypoxia sensor histidine kinase response regulato; transferase; 1.90A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >3a0r_A Sensor protein; four helix bundle, PAS fold, kinase, phosphoprotein, transfe two-component regulatory system; 3.80A {Thermotoga maritima} | Back alignment and structure |
|---|
| >4fpp_A Phosphotransferase; four helix bundle, bergerat fold, CCKA, CTRA, CPDR, bacterial cytoplasme; 2.20A {Caulobacter crescentus} PDB: 4fmt_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 762 | ||||
| d1usua_ | 256 | d.14.1.8 (A:) Heat shock protein hsp82 {Baker's ye | 2e-81 | |
| d2iwxa1 | 213 | d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharo | 1e-67 | |
| d2gqpa1 | 227 | d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) | 8e-67 | |
| d1uyla_ | 208 | d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: | 1e-62 | |
| d1sf8a_ | 115 | d.271.1.1 (A:) Chaperone protein HtpG {Escherichia | 5e-16 | |
| d2hkja3 | 219 | d.122.1.2 (A:10-228) Topoisomerase VI-B subunit {A | 0.001 | |
| d1h7sa2 | 203 | d.122.1.2 (A:29-231) DNA mismatch repair protein P | 0.004 |
| >d1usua_ d.14.1.8 (A:) Heat shock protein hsp82 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ribosomal protein S5 domain 2-like superfamily: Ribosomal protein S5 domain 2-like family: Hsp90 middle domain domain: Heat shock protein hsp82 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 258 bits (661), Expect = 2e-81
Identities = 131/280 (46%), Positives = 190/280 (67%), Gaps = 26/280 (9%)
Query: 350 KAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDL 409
K +W RNP ++T+EEY FY S+ D+ E PL HF+ EG +EF+A+LF+P +AP DL
Sbjct: 3 KPLWTRNPSDITQEEYNAFYKSISNDW--EDPLYVKHFSVEGQLEFRAILFIPKRAPFDL 60
Query: 410 YESYYNTNKANLKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHSSL 469
+ES K N+KLYVRRVFI+DE ++L+P++L+F+KG+VDS+ LPLN+SREMLQQ+ +
Sbjct: 61 FESKKK--KNNIKLYVRRVFITDEAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIM 118
Query: 470 KTIKKKLIRKALDMIRKIAEEDPDESTGKDKKDVEKFSDDDDKKGQYTKFWNEFGKSIKL 529
K I+K +++K ++ +IAE+ + KF++ F K+IKL
Sbjct: 119 KVIRKNIVKKLIEAFNEIAEDSEQ----------------------FEKFYSAFSKNIKL 156
Query: 530 GIIEDAANRNRLAKLLRFESTKSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPF 589
G+ ED NR LAKLLR+ STKS +LTSL Y++RM QK+I+YITG + + +EKSPF
Sbjct: 157 GVHEDTQNRAALAKLLRYNSTKSVDELTSLTDYVTRMPEHQKNIYYITGESLKSVEKSPF 216
Query: 590 LERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKE 629
L+ LK KN+EV+F TDP+DEY L ++E K +++K+
Sbjct: 217 LDALKAKNFEVLFLTDPIDEYAFTQLKEFEGKTLVDITKD 256
|
| >d2iwxa1 d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 213 | Back information, alignment and structure |
|---|
| >d2gqpa1 d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) [TaxId: 9615]} Length = 227 | Back information, alignment and structure |
|---|
| >d1uyla_ d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: 9606]} Length = 208 | Back information, alignment and structure |
|---|
| >d1sf8a_ d.271.1.1 (A:) Chaperone protein HtpG {Escherichia coli [TaxId: 562]} Length = 115 | Back information, alignment and structure |
|---|
| >d2hkja3 d.122.1.2 (A:10-228) Topoisomerase VI-B subunit {Archaeon Sulfolobus shibatae [TaxId: 2286]} Length = 219 | Back information, alignment and structure |
|---|
| >d1h7sa2 d.122.1.2 (A:29-231) DNA mismatch repair protein PMS2 {Human (Homo sapiens) [TaxId: 9606]} Length = 203 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 762 | |||
| d1usua_ | 256 | Heat shock protein hsp82 {Baker's yeast (Saccharom | 100.0 | |
| d2gqpa1 | 227 | HSP90 {Dog (Canis familiaris) [TaxId: 9615]} | 100.0 | |
| d2iwxa1 | 213 | HSP90 {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1uyla_ | 208 | HSP90 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1sf8a_ | 115 | Chaperone protein HtpG {Escherichia coli [TaxId: 5 | 99.94 | |
| d1h7sa2 | 203 | DNA mismatch repair protein PMS2 {Human (Homo sapi | 99.33 | |
| d2hkja3 | 219 | Topoisomerase VI-B subunit {Archaeon Sulfolobus sh | 99.24 | |
| d1b63a2 | 218 | DNA mismatch repair protein MutL {Escherichia coli | 99.21 | |
| d1pvga2 | 239 | DNA topoisomerase II {Baker's yeast (Saccharomyces | 97.96 | |
| d1kija2 | 212 | DNA gyrase B {Thermus thermophilus [TaxId: 274]} | 97.62 | |
| d1jm6a2 | 190 | Pyruvate dehydrogenase kinase {Rat (Rattus norvegi | 97.47 | |
| d1gkza2 | 193 | Branched-chain alpha-ketoacid dehydrogenase kinase | 97.41 | |
| d1ei1a2 | 219 | DNA gyrase B {Escherichia coli [TaxId: 562]} | 97.37 | |
| d1y8oa2 | 125 | Pyruvate dehydrogenase kinase {Human (Homo sapiens | 97.31 | |
| d1ysra1 | 148 | Sensor-type histidine kinase PrrB {Mycobacterium t | 97.15 | |
| d1id0a_ | 146 | Histidine kinase PhoQ domain {Escherichia coli [Ta | 97.05 | |
| d2c2aa2 | 161 | Sensor histidine kinase TM0853 {Thermotoga maritim | 96.96 | |
| d1bxda_ | 161 | Histidine kinase domain of the osmosensor EnvZ {Es | 96.88 | |
| d1th8a_ | 139 | Anti-sigma factor spoIIab {Bacillus stearothermoph | 96.8 | |
| d1ixma_ | 179 | Sporulation response regulatory protein Spo0B {Bac | 95.68 | |
| d1s14a_ | 168 | Topoisomerase IV subunit B {Escherichia coli [TaxI | 95.19 | |
| d1r62a_ | 156 | Nitrogen regulation protein NtrB, C-terminal domai | 90.17 |
| >d1usua_ d.14.1.8 (A:) Heat shock protein hsp82 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ribosomal protein S5 domain 2-like superfamily: Ribosomal protein S5 domain 2-like family: Hsp90 middle domain domain: Heat shock protein hsp82 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.3e-86 Score=687.93 Aligned_cols=255 Identities=52% Similarity=0.943 Sum_probs=238.1
Q ss_pred CCcccccCCCCCCHHHHHHHHHHhhcCCCCCCCccceeccccccceeeEEEEecCCCCcchhhhhhcccccceEEEeeec
Q 004309 349 VKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKANLKLYVRRV 428 (762)
Q Consensus 349 ~~piW~r~~~evt~eey~~Fyk~~~~~~~~~~PL~~~h~~~eg~~~f~~llyiP~~~p~~~~~~~~~~~~~~ikLYvrrV 428 (762)
.+|||+|+|++||+|||.+|||+++++| ++||+|+||++||+++|+||||||+.+|+++|+. ...+++|+||||||
T Consensus 2 tkpiW~r~~~eit~eeY~~FYk~l~~~~--~~Pl~~iH~~~eg~~~~~~lLyiP~~~p~~~~~~--~~~~~~ikLY~~rV 77 (256)
T d1usua_ 2 TKPLWTRNPSDITQEEYNAFYKSISNDW--EDPLYVKHFSVEGQLEFRAILFIPKRAPFDLFES--KKKKNNIKLYVRRV 77 (256)
T ss_dssp CCCGGGSCGGGCCHHHHHHHHHHHHCCS--SCCSEEEEEEECSSSCEEEEEEECSSCCTTTTCC------CCEEEEETTE
T ss_pred CCCCccCCchhCCHHHHHHHHHhhcCCc--cCCceeEEeeeeeeEEEEEEEEecccCcchhhhh--hhhcCCeEEEEEee
Confidence 5799999999999999999999999999 9999999999999999999999999999999864 24578999999999
Q ss_pred cccccccccchhhhccccceecCCCCCCccchHhhhcchHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCCcccccccCC
Q 004309 429 FISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRKIAEEDPDESTGKDKKDVEKFSD 508 (762)
Q Consensus 429 fI~d~~~~llP~yl~Fv~GVVDS~dLpLNvSRE~LQ~~~~l~~I~k~l~~k~l~~l~~la~~~~~~~~~~~~~~~~~~~~ 508 (762)
||+|+|++|||+||+||||||||+|||||||||+||+|++|++|++.|++||+++|+++++
T Consensus 78 fI~d~~~~llP~~L~FvkGVVDS~DlpLNVSRE~LQ~~~~l~kI~~~i~kkv~~~L~~~~~------------------- 138 (256)
T d1usua_ 78 FITDEAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKNIVKKLIEAFNEIAE------------------- 138 (256)
T ss_dssp EEESCCTTSSCGGGTTCEEEEEESSCCSCC------CCHHHHHHHHHHHHHHHHHHHHHHT-------------------
T ss_pred eeccchhhHHHHHHHHhhhccccccCCcccchhhhcccHHHHHHHHHHHHHHHHHHHHhhh-------------------
Confidence 9999999999999999999999999999999999999999999999999999999988754
Q ss_pred CchhhhHHHHHHHHHhHHhhhhcccCHHhHHHHhhhccceecCCCCcccCHHHHHhhccCCCceEEEEeCCCHHHHhcCh
Q 004309 509 DDDKKGQYTKFWNEFGKSIKLGIIEDAANRNRLAKLLRFESTKSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSP 588 (762)
Q Consensus 509 ~~~~~~~y~~f~~~f~~~lK~G~~eD~~nr~~l~~LLrf~ss~~~~~~~sL~eYv~rmke~Q~~IYY~~g~s~~~~~~SP 588 (762)
++++|.+||++||.+||+|+++|.+|++++++||||+||.++++++||+||++||+++|+.|||++|++++++++||
T Consensus 139 ---d~eky~~fw~~fg~~lK~G~~~D~~~~e~l~~ll~f~ss~s~~e~~SL~eYvermke~Qk~IyYi~~~s~~~~~~sP 215 (256)
T d1usua_ 139 ---DSEQFEKFYSAFSKNIKLGVHEDTQNRAALAKLLRYNSTKSVDELTSLTDYVTRMPEHQKNIYYITGESLKSVEKSP 215 (256)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHTTCEEEETTEEEEEEEHHHHHHTSCTTCCEEEEEECSSHHHHHTCT
T ss_pred ---CHHHHHHHHHHHhHHHhhhccccHHHHHHHHHhhhhhccCCCcceeeHHHHHhhccccccceEEEecCCHHHHHcCH
Confidence 46799999999999999999999999999999999999988788999999999999999999999999999999999
Q ss_pred hHHHHHhCCCeEEecCCCCcHHHHHHhhhcCCcceEeeccc
Q 004309 589 FLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKE 629 (762)
Q Consensus 589 ~lE~~~~kg~EVL~l~dpiDE~~i~~L~ef~gkkf~~V~k~ 629 (762)
|+|.|++||||||||+||||||||++|.+|+||+|+||+++
T Consensus 216 ~lE~~k~kg~EVL~l~dpiDe~~i~~l~e~~~kkf~sV~ke 256 (256)
T d1usua_ 216 FLDALKAKNFEVLFLTDPIDEYAFTQLKEFEGKTLVDITKD 256 (256)
T ss_dssp THHHHHHTTCCEEEECSHHHHHHHHHHCEETTEEEEETTCC
T ss_pred HHHHHHHCCCEEEEecCchHHHHHHHHHHhCCCceeecCCC
Confidence 99999999999999999999999999999999999999875
|
| >d2gqpa1 d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
| >d2iwxa1 d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1uyla_ d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1sf8a_ d.271.1.1 (A:) Chaperone protein HtpG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1h7sa2 d.122.1.2 (A:29-231) DNA mismatch repair protein PMS2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2hkja3 d.122.1.2 (A:10-228) Topoisomerase VI-B subunit {Archaeon Sulfolobus shibatae [TaxId: 2286]} | Back information, alignment and structure |
|---|
| >d1pvga2 d.122.1.2 (A:7-245) DNA topoisomerase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1kija2 d.122.1.2 (A:9-220) DNA gyrase B {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1jm6a2 d.122.1.4 (A:1177-1366) Pyruvate dehydrogenase kinase {Rat (Rattus norvegicus), isozyme 2 [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1gkza2 d.122.1.4 (A:186-378) Branched-chain alpha-ketoacid dehydrogenase kinase (BCK) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1ei1a2 d.122.1.2 (A:2-220) DNA gyrase B {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1y8oa2 d.122.1.4 (A:177-301) Pyruvate dehydrogenase kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ysra1 d.122.1.3 (A:299-446) Sensor-type histidine kinase PrrB {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1id0a_ d.122.1.3 (A:) Histidine kinase PhoQ domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2c2aa2 d.122.1.3 (A:321-481) Sensor histidine kinase TM0853 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1bxda_ d.122.1.3 (A:) Histidine kinase domain of the osmosensor EnvZ {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1th8a_ d.122.1.3 (A:) Anti-sigma factor spoIIab {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1ixma_ d.123.1.1 (A:) Sporulation response regulatory protein Spo0B {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1s14a_ d.122.1.2 (A:) Topoisomerase IV subunit B {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1r62a_ d.122.1.3 (A:) Nitrogen regulation protein NtrB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|