Citrus Sinensis ID: 004392
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 756 | 2.2.26 [Sep-21-2011] | |||||||
| Q8VY06 | 1080 | Presequence protease 2, c | yes | no | 0.728 | 0.510 | 0.814 | 0.0 | |
| Q9LJL3 | 1080 | Presequence protease 1, c | no | no | 0.728 | 0.510 | 0.807 | 0.0 | |
| Q46205 | 973 | Protein HypA OS=Clostridi | yes | no | 0.720 | 0.560 | 0.324 | 2e-83 | |
| Q7ZVZ6 | 1023 | Presequence protease, mit | yes | no | 0.292 | 0.216 | 0.482 | 3e-59 | |
| Q5JRX3 | 1037 | Presequence protease, mit | yes | no | 0.277 | 0.202 | 0.483 | 5e-57 | |
| Q6PF24 | 1027 | Presequence protease, mit | N/A | no | 0.252 | 0.185 | 0.510 | 6e-56 | |
| Q28BR5 | 1027 | Presequence protease, mit | yes | no | 0.277 | 0.204 | 0.474 | 6e-56 | |
| Q8K411 | 1036 | Presequence protease, mit | yes | no | 0.277 | 0.202 | 0.469 | 1e-55 | |
| Q5RDG3 | 1037 | Presequence protease, mit | yes | no | 0.277 | 0.202 | 0.474 | 3e-55 | |
| O42908 | 882 | Mitochondrial presequence | no | no | 0.283 | 0.242 | 0.481 | 9e-51 |
| >sp|Q8VY06|PREP2_ARATH Presequence protease 2, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=PREP2 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 946 bits (2444), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/551 (81%), Positives = 504/551 (91%)
Query: 205 EASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEG 264
EASMNTIEFSLRENNTGS PRGLSLML+S+ KWIYDM+PFEPLKYE+PL +LKAR+AE+G
Sbjct: 482 EASMNTIEFSLRENNTGSSPRGLSLMLQSIAKWIYDMDPFEPLKYEEPLKSLKARIAEKG 541
Query: 265 SKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELARA 324
SK+VFSPLIE+YILNNPHCVT+EMQPDPEKAS +EA EK IL KVK+SMT+EDL ELARA
Sbjct: 542 SKSVFSPLIEEYILNNPHCVTIEMQPDPEKASLEEAEEKSILEKVKASMTEEDLTELARA 601
Query: 325 TEELRLKQETPDPPEALRSVPSLSLRDIPKEPIRVPTEVGDINGVKVLQHDLFTNDVLYT 384
TEELRLKQETPDPP+AL+ VPSL+L DIPKEPI VPTEVGDINGVKVL++DLFTN++LYT
Sbjct: 602 TEELRLKQETPDPPDALKCVPSLNLSDIPKEPIYVPTEVGDINGVKVLRNDLFTNNILYT 661
Query: 385 EVVFDMSSLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPFTSSIHGK 444
EVVFDM S+K ELL LIPLFCQSL EMGT+DL+FVQL+QLIGRKTGGISVYP TSS++G+
Sbjct: 662 EVVFDMGSVKHELLQLIPLFCQSLLEMGTQDLTFVQLNQLIGRKTGGISVYPLTSSVYGR 721
Query: 445 EDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMENRLRGSGH 504
+DPC ++VRGK+M G+AEDLFNL NCVLQEV+ TDQQRFKQFVSQS+ARMENRLRGSG
Sbjct: 722 DDPCSKIIVRGKSMVGRAEDLFNLMNCVLQEVRFTDQQRFKQFVSQSRARMENRLRGSGQ 781
Query: 505 GIAAARMDAKLNTAGWISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREG 564
GIAAARMDA LN AGW+SEQMGG+SYLEFL LE+KVDQDW GISSSLEEIRRSFLSR G
Sbjct: 782 GIAAARMDAMLNVAGWMSEQMGGLSYLEFLHTLEQKVDQDWEGISSSLEEIRRSFLSRNG 841
Query: 565 CLINMTADGKNLKNSERFVGKFLDMLPTNSPVERVKWKAHLPSANEAIVIPTQVNYVGKA 624
C++NMTADGK+L N+E++VGKFLD+LP N E V W A LP NEAIVIPTQVNYVGKA
Sbjct: 842 CIVNMTADGKSLTNTEKYVGKFLDLLPENPSGELVTWDARLPLRNEAIVIPTQVNYVGKA 901
Query: 625 ANIFETGYKLNGSAYVISKHISNVWLWDRVRVSGGAYGGFCDFDSHSGVFSFLSYRDPNL 684
NI+ +GYKL+GS+YVISKHISN WLWDRVRVSGGAYGG CDFDSHSGVFSFLSYRDPNL
Sbjct: 902 GNIYSSGYKLDGSSYVISKHISNTWLWDRVRVSGGAYGGSCDFDSHSGVFSFLSYRDPNL 961
Query: 685 LKTLDIYDGTVDFLRELEMDDDTLTKAIIGTIGDVDAYQLPDAKGYSSLLRHLLGITEEE 744
LKTLDIYDGT DFLR L++D+DTLTKAIIGTIGDVD+YQLPDAKGY+SLLRHLL +T+EE
Sbjct: 962 LKTLDIYDGTGDFLRGLDVDEDTLTKAIIGTIGDVDSYQLPDAKGYTSLLRHLLNVTDEE 1021
Query: 745 RQRRREEILST 755
RQ RREEILST
Sbjct: 1022 RQIRREEILST 1032
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ATP-independent protease that degrades both mitochondrial and chloroplastic transit peptides after their cleavage. Also degrades other unstructured peptides. Specific for peptides in the range of 10 to 65 residues. Shows a preference for cleavage after small polar residues and before basic residues, but without any positional preference. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 4EC: .EC: 2EC: 4EC: .EC: - |
| >sp|Q9LJL3|PREP1_ARATH Presequence protease 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=PREP1 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q46205|HYPA_CLOPE Protein HypA OS=Clostridium perfringens (strain 13 / Type A) GN=hypA PE=4 SV=2 | Back alignment and function description |
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| >sp|Q7ZVZ6|PREP_DANRE Presequence protease, mitochondrial OS=Danio rerio GN=pitrm1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q5JRX3|PREP_HUMAN Presequence protease, mitochondrial OS=Homo sapiens GN=PITRM1 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q6PF24|PREP_XENLA Presequence protease, mitochondrial OS=Xenopus laevis GN=pitrm1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q28BR5|PREP_XENTR Presequence protease, mitochondrial OS=Xenopus tropicalis GN=pitrm1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q8K411|PREP_MOUSE Presequence protease, mitochondrial OS=Mus musculus GN=Pitrm1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q5RDG3|PREP_PONAB Presequence protease, mitochondrial OS=Pongo abelii GN=PITRM1 PE=2 SV=1 | Back alignment and function description |
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| >sp|O42908|CYM1_SCHPO Mitochondrial presequence protease OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cym1 PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 756 | ||||||
| 326488169 | 957 | predicted protein [Hordeum vulgare subsp | 0.981 | 0.775 | 0.694 | 0.0 | |
| 357137984 | 961 | PREDICTED: presequence protease 1, chlor | 0.986 | 0.776 | 0.692 | 0.0 | |
| 225428772 | 1080 | PREDICTED: presequence protease 2, chlor | 0.728 | 0.510 | 0.867 | 0.0 | |
| 297741302 | 1098 | unnamed protein product [Vitis vinifera] | 0.705 | 0.485 | 0.867 | 0.0 | |
| 358343875 | 698 | Presequence protease [Medicago truncatul | 0.728 | 0.789 | 0.820 | 0.0 | |
| 224123316 | 1007 | predicted protein [Populus trichocarpa] | 0.723 | 0.543 | 0.856 | 0.0 | |
| 358343873 | 1124 | Presequence protease [Medicago truncatul | 0.728 | 0.490 | 0.820 | 0.0 | |
| 224103569 | 1006 | predicted protein [Populus trichocarpa] | 0.724 | 0.544 | 0.852 | 0.0 | |
| 255555501 | 774 | zinc metalloprotease, putative [Ricinus | 0.728 | 0.711 | 0.847 | 0.0 | |
| 356497516 | 1078 | PREDICTED: presequence protease 2, chlor | 0.728 | 0.511 | 0.838 | 0.0 |
| >gi|326488169|dbj|BAJ89923.1| predicted protein [Hordeum vulgare subsp. vulgare] | Back alignment and taxonomy information |
|---|
Score = 1082 bits (2799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 547/788 (69%), Positives = 630/788 (79%), Gaps = 46/788 (5%)
Query: 1 MSVSNDDENKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLN 60
MSV+NDDENKVFGIVFRTPPK+STGIPHILEHSVLCGSRKYPLKEPFVELLKGSL+TFLN
Sbjct: 136 MSVANDDENKVFGIVFRTPPKNSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLHTFLN 195
Query: 61 AFTYPDRTCYPVASTNTKDFYNLVDVYFDAVFFPKCVEDFQTFQQEGWHFKLDNPSEDIT 120
AFTYPDRTCYPVASTNTKDFYNLVDVY DAVFFPKCVEDFQTFQQEGWH++L+NP E+I+
Sbjct: 196 AFTYPDRTCYPVASTNTKDFYNLVDVYLDAVFFPKCVEDFQTFQQEGWHYELNNPEEEIS 255
Query: 121 YKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLTFEEFKEFHRKY 180
YKGVVFNEMKGVYSQPDNI+GR +QQAL PDN YGVDSGGDP IP LTFEEFKEFHRK+
Sbjct: 256 YKGVVFNEMKGVYSQPDNIMGRVSQQALSPDNTYGVDSGGDPNEIPNLTFEEFKEFHRKF 315
Query: 181 YHPSNARIWFYGDDDPNERLRILSEASMNTIEFSLRENNTGSFPRGL------------- 227
YHPSNARIWFYGDDD ERLRILSE ++ E S N + P+ L
Sbjct: 316 YHPSNARIWFYGDDDTKERLRILSEY-LDLFEASPARNESKVMPQRLFKEPVRIAEKYPA 374
Query: 228 ----SLMLRSM--GKWIYDMNPFE-----------PLKYEKPLMALKARLAEEG-SKAVF 269
L + M W+ P + L P L+ L E G +A+
Sbjct: 375 GQEGDLKKKYMVCTNWLLSEEPLDVETELALGFLDHLLLGTPASPLRRILLESGLGEAIV 434
Query: 270 SPLIEKYILNNPHCVTVEMQPDPEKASRD--EAAEKEILAKVKSSMTKEDLAELARATEE 327
+E +L + ++ S D E E+ ++ +K +LAELARAT+E
Sbjct: 435 GGGVEDELLQPQFSIGLK------GVSEDNIEKVEELVMQILK------NLAELARATKE 482
Query: 328 LRLKQETPDPPEALRSVPSLSLRDIPKEPIRVPTEVGDINGVKVLQHDLFTNDVLYTEVV 387
L+ KQETPDPPEAL++VPSLSL+DIPK+PI VP EVG+INGVKVLQHDLFTNDV+Y+EVV
Sbjct: 483 LKDKQETPDPPEALKAVPSLSLQDIPKKPIHVPIEVGEINGVKVLQHDLFTNDVVYSEVV 542
Query: 388 FDMSSLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPFTSSIHGKEDP 447
FDM S+K+E L L+PLFCQSL EMGTKD+ FVQL+QLIGRKTGGISVYP TSSI G +DP
Sbjct: 543 FDMGSMKKEHLQLLPLFCQSLLEMGTKDMDFVQLNQLIGRKTGGISVYPLTSSIKGTDDP 602
Query: 448 CCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMENRLRGSGHGIA 507
+VVRGKAM+ + EDLF+L NC+LQ+VQ T+QQRFKQFVSQSKARMENRLRGSGHGIA
Sbjct: 603 LTRIVVRGKAMSTRVEDLFHLMNCLLQDVQFTEQQRFKQFVSQSKARMENRLRGSGHGIA 662
Query: 508 AARMDAKLNTAGWISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREGCLI 567
AARMDAKLN AGWISEQMGGVSYLE+L+ LE K+DQDW IS+SLEE+R+S S+EGCLI
Sbjct: 663 AARMDAKLNAAGWISEQMGGVSYLEYLRDLETKIDQDWDRISASLEEMRKSLFSKEGCLI 722
Query: 568 NMTADGKNLKNSERFVGKFLDMLPTNSPVERVKWKAHLPSANEAIVIPTQVNYVGKAANI 627
N+T+D KNL+ S + + KFLD LP+ + W + LPS NEAIVIPTQVNYVGKA N+
Sbjct: 723 NITSDSKNLEKSGQHIAKFLDALPSAPSLGSDPWLSRLPSVNEAIVIPTQVNYVGKAGNL 782
Query: 628 FETGYKLNGSAYVISKHISNVWLWDRVRVSGGAYGGFCDFDSHSGVFSFLSYRDPNLLKT 687
+++GY+LNGSAYVISKHISN WLWDRVRVSGGAYGGFCDFD+HSGVFS+LSYRDPNLLKT
Sbjct: 783 YQSGYQLNGSAYVISKHISNTWLWDRVRVSGGAYGGFCDFDTHSGVFSYLSYRDPNLLKT 842
Query: 688 LDIYDGTVDFLRELEMDDDTLTKAIIGTIGDVDAYQLPDAKGYSSLLRHLLGITEEERQR 747
L++YDGT FLRELE+DDD LTKAIIGTIGDVD+YQLPDAKGYSSL+R+LLGITEEERQ+
Sbjct: 843 LEVYDGTAKFLRELEVDDDALTKAIIGTIGDVDSYQLPDAKGYSSLMRYLLGITEEERQQ 902
Query: 748 RREEILST 755
RREEIL+T
Sbjct: 903 RREEILAT 910
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Source: Hordeum vulgare subsp. vulgare Species: Hordeum vulgare Genus: Hordeum Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357137984|ref|XP_003570578.1| PREDICTED: presequence protease 1, chloroplastic/mitochondrial-like isoform 2 [Brachypodium distachyon] | Back alignment and taxonomy information |
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| >gi|225428772|ref|XP_002282024.1| PREDICTED: presequence protease 2, chloroplastic/mitochondrial-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297741302|emb|CBI32433.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|358343875|ref|XP_003636021.1| Presequence protease [Medicago truncatula] gi|355501956|gb|AES83159.1| Presequence protease [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|224123316|ref|XP_002330286.1| predicted protein [Populus trichocarpa] gi|222871321|gb|EEF08452.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|358343873|ref|XP_003636020.1| Presequence protease [Medicago truncatula] gi|355501955|gb|AES83158.1| Presequence protease [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|224103569|ref|XP_002313107.1| predicted protein [Populus trichocarpa] gi|222849515|gb|EEE87062.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|255555501|ref|XP_002518787.1| zinc metalloprotease, putative [Ricinus communis] gi|223542168|gb|EEF43712.1| zinc metalloprotease, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|356497516|ref|XP_003517606.1| PREDICTED: presequence protease 2, chloroplastic/mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 756 | ||||||
| TAIR|locus:2012176 | 1080 | PREP2 "presequence protease 2" | 0.728 | 0.510 | 0.800 | 0.0 | |
| TAIR|locus:2094138 | 1080 | PREP1 "presequence protease 1" | 0.728 | 0.510 | 0.793 | 0.0 | |
| DICTYBASE|DDB_G0271506 | 1066 | pitrm1 "peptidase M16 family p | 0.284 | 0.201 | 0.454 | 2e-102 | |
| ZFIN|ZDB-GENE-040426-2876 | 1023 | pitrm1 "pitrilysin metalloprot | 0.292 | 0.216 | 0.482 | 4.1e-101 | |
| UNIPROTKB|F1NGG7 | 1032 | PITRM1 "Uncharacterized protei | 0.285 | 0.209 | 0.466 | 3.1e-98 | |
| UNIPROTKB|E1C9F5 | 1033 | PITRM1 "Uncharacterized protei | 0.285 | 0.209 | 0.466 | 3.1e-98 | |
| UNIPROTKB|F1P2D3 | 1038 | PITRM1 "Uncharacterized protei | 0.285 | 0.208 | 0.466 | 3.3e-98 | |
| RGD|1310998 | 954 | Pitrm1 "pitrilysin metallopept | 0.285 | 0.226 | 0.470 | 2.2e-97 | |
| UNIPROTKB|C9JSL2 | 1038 | PITRM1 "Presequence protease, | 0.277 | 0.202 | 0.483 | 3.5e-96 | |
| UNIPROTKB|Q5JRX3 | 1037 | PITRM1 "Presequence protease, | 0.277 | 0.202 | 0.483 | 4.4e-96 |
| TAIR|locus:2012176 PREP2 "presequence protease 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2318 (821.0 bits), Expect = 0., Sum P(2) = 0.
Identities = 441/551 (80%), Positives = 495/551 (89%)
Query: 205 EASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEG 264
EASMNTIEFSLRENNTGS PRGLSLML+S+ KWIYDM+PFEPLKYE+PL +LKAR+AE+G
Sbjct: 482 EASMNTIEFSLRENNTGSSPRGLSLMLQSIAKWIYDMDPFEPLKYEEPLKSLKARIAEKG 541
Query: 265 SKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELARA 324
SK+VFSPLIE+YILNNPHCVT+EMQPDPEKAS +EA EK IL KVK+SMT+EDL ELARA
Sbjct: 542 SKSVFSPLIEEYILNNPHCVTIEMQPDPEKASLEEAEEKSILEKVKASMTEEDLTELARA 601
Query: 325 TEELRLKQETPDPPEALRSVPSLSLRDIPKEPIRVPTEVGDINGVKVLQHDLFTNDVLYT 384
TEELRLKQETPDPP+AL+ VPSL+L DIPKEPI VPTEVGDINGVKVL++DLFTN++LYT
Sbjct: 602 TEELRLKQETPDPPDALKCVPSLNLSDIPKEPIYVPTEVGDINGVKVLRNDLFTNNILYT 661
Query: 385 EVVFDMSSLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPFTSSIHGK 444
EVVFDM S+K ELL LIPLFCQSL EMGT+DL+FVQL+QLIGRKTGGISVYP TSS++G+
Sbjct: 662 EVVFDMGSVKHELLQLIPLFCQSLLEMGTQDLTFVQLNQLIGRKTGGISVYPLTSSVYGR 721
Query: 445 EDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMENRLRGSGH 504
+DPC ++VRGK+M G+AEDLFNL NCVLQEV+ TDQQRFKQFVSQS+ARMENRLRGSG
Sbjct: 722 DDPCSKIIVRGKSMVGRAEDLFNLMNCVLQEVRFTDQQRFKQFVSQSRARMENRLRGSGQ 781
Query: 505 GIAAARMDAKLNTAGWISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREG 564
GIAAARMDA LN AGW+SEQMGG+SYLEFL LE+KVDQDW GISSSLEEIRRSFLSR G
Sbjct: 782 GIAAARMDAMLNVAGWMSEQMGGLSYLEFLHTLEQKVDQDWEGISSSLEEIRRSFLSRNG 841
Query: 565 CLINMTADGKNLKNSERFVGKFLDMLPTNSPVERVKWKAHLPSANEAIVIPTQVNYVGKA 624
C++NMTADGK+L N+E++VGKFLD+LP N E V W A LP NEAIVIPTQVNYVGKA
Sbjct: 842 CIVNMTADGKSLTNTEKYVGKFLDLLPENPSGELVTWDARLPLRNEAIVIPTQVNYVGKA 901
Query: 625 ANIFETGYKLNGSAYVISKHISNVWLWDRVRVSGGAYGGFCDFDSHSGVFSFLSYRDPNL 684
NI+ +GYKL+GS+YVISKHISN WLWDRVRVSGGAYGG CDFDSHSGVFSFLSYRDPNL
Sbjct: 902 GNIYSSGYKLDGSSYVISKHISNTWLWDRVRVSGGAYGGSCDFDSHSGVFSFLSYRDPNL 961
Query: 685 LKTLDIYDGTVDFLRELEMDDDTLTKAIIGTIGDVDAYQLPDAKGYSSLLRHLLGITXXX 744
LKTLDIYDGT DFLR L++D+DTLTKAIIGTIGDVD+YQLPDAKGY+SLLRHLL +T
Sbjct: 962 LKTLDIYDGTGDFLRGLDVDEDTLTKAIIGTIGDVDSYQLPDAKGYTSLLRHLLNVTDEE 1021
Query: 745 XXXXXXXILST 755
ILST
Sbjct: 1022 RQIRREEILST 1032
|
|
| TAIR|locus:2094138 PREP1 "presequence protease 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0271506 pitrm1 "peptidase M16 family protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-040426-2876 pitrm1 "pitrilysin metalloproteinase 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NGG7 PITRM1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1C9F5 PITRM1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1P2D3 PITRM1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| RGD|1310998 Pitrm1 "pitrilysin metallopeptidase 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|C9JSL2 PITRM1 "Presequence protease, mitochondrial" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q5JRX3 PITRM1 "Presequence protease, mitochondrial" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q8VY06 | PREP2_ARATH | 3, ., 4, ., 2, 4, ., - | 0.8148 | 0.7288 | 0.5101 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.4.24 | 0.691 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 756 | |||
| COG1026 | 978 | COG1026, COG1026, Predicted Zn-dependent peptidase | 1e-122 | |
| COG1026 | 978 | COG1026, COG1026, Predicted Zn-dependent peptidase | 4e-98 | |
| PTZ00432 | 1119 | PTZ00432, PTZ00432, falcilysin; Provisional | 1e-84 | |
| pfam08367 | 248 | pfam08367, M16C_assoc, Peptidase M16C associated | 1e-68 | |
| PTZ00432 | 1119 | PTZ00432, PTZ00432, falcilysin; Provisional | 6e-61 | |
| COG0612 | 438 | COG0612, PqqL, Predicted Zn-dependent peptidases [ | 3e-19 | |
| COG1025 | 937 | COG1025, Ptr, Secreted/periplasmic Zn-dependent pe | 4e-11 | |
| pfam00675 | 149 | pfam00675, Peptidase_M16, Insulinase (Peptidase fa | 3e-06 | |
| pfam05193 | 182 | pfam05193, Peptidase_M16_C, Peptidase M16 inactive | 4e-06 | |
| PRK15101 | 961 | PRK15101, PRK15101, protease3; Provisional | 4e-05 |
| >gnl|CDD|223957 COG1026, COG1026, Predicted Zn-dependent peptidases, insulinase-like [General function prediction only] | Back alignment and domain information |
|---|
Score = 388 bits (998), Expect = e-122
Identities = 190/570 (33%), Positives = 301/570 (52%), Gaps = 17/570 (2%)
Query: 197 NERLRILSEASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMAL 256
N + L EA ++ +EFSL+E S+P GL LM RS+ W+ +P + L++ L L
Sbjct: 369 NGIDKKLIEAILHQLEFSLKEV--KSYPFGLGLMFRSLYGWLNGGDPEDSLRFLDYLQNL 426
Query: 257 KARLAEEGSKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKE 316
+ +L + F LI KY L+NPH VTV + P PE + E E+E+L K S +T E
Sbjct: 427 REKLEKGP---YFEKLIRKYFLDNPHYVTVIVLPSPELEEKLEKEERELLQKRSSELTDE 483
Query: 317 DLAELARATEELRLKQETPDPPEALRSVPSLSLRDIPKEPIRVPTEVGDINGVKVLQHDL 376
DL ++ + +++L+ +Q+ PD E L ++P+L L D+P + E N KVL HDL
Sbjct: 484 DLEKIIKDSKKLKERQDQPDSEEDLATLPTLKLGDVPDPIEKTSLETEVSNEAKVLHHDL 543
Query: 377 FTNDVLYTEVVFDMSSLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISV-Y 435
FTN + Y + FD+ L ELLP +PLF +L +GT+ S+ +L I R TGGISV
Sbjct: 544 FTNGITYLRLYFDLDMLPSELLPYLPLFAFALTNLGTETYSYKELLNQIERHTGGISVSL 603
Query: 436 PFTSSIHGKEDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARM 495
+ + + GKA+ + E LF L +L D++R K+ + Q + +
Sbjct: 604 SVDTDPGDDGEYRPSFSISGKALRSKVEKLFELIREILANTDFHDRERLKELLEQYLSDL 663
Query: 496 ENRLRGSGHGIAAARMDAKLNTAGWISEQMGGVSYLEFLQALEEKVDQ-DWAGISSSLEE 554
+ +R SGH IA++ +++L++AG + E + G+S ++FL+ L ++ I+ L+
Sbjct: 664 TSSVRNSGHSIASSLANSRLSSAGALKELLNGLSQVKFLRELSSNFEENFEKEIADKLQA 723
Query: 555 IRRSFLSREGCLINMTADGKNLKNSERFVGKFLDMLPTNSPVERV--KWK-AHL---PSA 608
+R+ + + G K + L L P + K HL S
Sbjct: 724 LRKKIFQTNN--LRIAIIGDIDKILDLLENPLLKFLEHLLPGFELPTPPKNPHLDLISSL 781
Query: 609 NEAIVIPTQVNYVGKAANIFETGYKL--NGSAYVISKHISNVWLWDRVRVSGGAYGGFCD 666
+EA +IP+ V Y A +I Y + V+S+++ + +LW+++R GGAYG
Sbjct: 782 SEATIIPSPVAYNALAFSIGGLPYTHPDYAALQVLSEYLGSGYLWNKIREKGGAYGASAS 841
Query: 667 FDSHSGVFSFLSYRDPNLLKTLDIYDGTVDFLRELEMDDDTLTKAIIGTIGDVDAYQLPD 726
D++ GVFSF SYRDPN+LKT ++ +V L D+ L +AI+G I +D + P
Sbjct: 842 IDANRGVFSFASYRDPNILKTYKVFRKSVKDLASGNFDERDLEEAILGIISTLDTPESPA 901
Query: 727 AKGYSSLLRHLLGITEEERQRRREEILSTR 756
++G S R L G+T+EERQ RE +L
Sbjct: 902 SEGSKSFYRDLSGLTDEERQAFRERLLDVT 931
|
Length = 978 |
| >gnl|CDD|223957 COG1026, COG1026, Predicted Zn-dependent peptidases, insulinase-like [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|240416 PTZ00432, PTZ00432, falcilysin; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|116948 pfam08367, M16C_assoc, Peptidase M16C associated | Back alignment and domain information |
|---|
| >gnl|CDD|240416 PTZ00432, PTZ00432, falcilysin; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223685 COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|223956 COG1025, Ptr, Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >gnl|CDD|216056 pfam00675, Peptidase_M16, Insulinase (Peptidase family M16) | Back alignment and domain information |
|---|
| >gnl|CDD|218490 pfam05193, Peptidase_M16_C, Peptidase M16 inactive domain | Back alignment and domain information |
|---|
| >gnl|CDD|185056 PRK15101, PRK15101, protease3; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 756 | |||
| KOG2019 | 998 | consensus Metalloendoprotease HMP1 (insulinase sup | 100.0 | |
| COG1026 | 978 | Predicted Zn-dependent peptidases, insulinase-like | 100.0 | |
| PTZ00432 | 1119 | falcilysin; Provisional | 100.0 | |
| KOG0961 | 1022 | consensus Predicted Zn2+-dependent endopeptidase, | 100.0 | |
| PRK15101 | 961 | protease3; Provisional | 100.0 | |
| COG1025 | 937 | Ptr Secreted/periplasmic Zn-dependent peptidases, | 100.0 | |
| KOG0959 | 974 | consensus N-arginine dibasic convertase NRD1 and r | 100.0 | |
| COG0612 | 438 | PqqL Predicted Zn-dependent peptidases [General fu | 100.0 | |
| COG0612 | 438 | PqqL Predicted Zn-dependent peptidases [General fu | 100.0 | |
| PF08367 | 248 | M16C_assoc: Peptidase M16C associated; InterPro: I | 100.0 | |
| KOG0960 | 467 | consensus Mitochondrial processing peptidase, beta | 100.0 | |
| TIGR02110 | 696 | PQQ_syn_pqqF coenzyme PQQ biosynthesis probable pe | 100.0 | |
| TIGR02110 | 696 | PQQ_syn_pqqF coenzyme PQQ biosynthesis probable pe | 100.0 | |
| KOG0960 | 467 | consensus Mitochondrial processing peptidase, beta | 99.97 | |
| PRK15101 | 961 | protease3; Provisional | 99.96 | |
| PTZ00432 | 1119 | falcilysin; Provisional | 99.92 | |
| KOG2067 | 472 | consensus Mitochondrial processing peptidase, alph | 99.92 | |
| KOG2067 | 472 | consensus Mitochondrial processing peptidase, alph | 99.91 | |
| PF00675 | 149 | Peptidase_M16: Insulinase (Peptidase family M16) T | 99.8 | |
| PF05193 | 184 | Peptidase_M16_C: Peptidase M16 inactive domain; In | 99.71 | |
| COG1025 | 937 | Ptr Secreted/periplasmic Zn-dependent peptidases, | 99.7 | |
| KOG0959 | 974 | consensus N-arginine dibasic convertase NRD1 and r | 99.68 | |
| KOG2583 | 429 | consensus Ubiquinol cytochrome c reductase, subuni | 99.61 | |
| COG1026 | 978 | Predicted Zn-dependent peptidases, insulinase-like | 99.48 | |
| KOG2583 | 429 | consensus Ubiquinol cytochrome c reductase, subuni | 99.47 | |
| PF00675 | 149 | Peptidase_M16: Insulinase (Peptidase family M16) T | 99.43 | |
| KOG2019 | 998 | consensus Metalloendoprotease HMP1 (insulinase sup | 99.06 | |
| KOG0961 | 1022 | consensus Predicted Zn2+-dependent endopeptidase, | 98.94 | |
| PF05193 | 184 | Peptidase_M16_C: Peptidase M16 inactive domain; In | 98.87 | |
| PF03410 | 590 | Peptidase_M44: Protein G1; InterPro: IPR005072 In | 95.03 | |
| PHA03081 | 595 | putative metalloprotease; Provisional | 92.66 | |
| PF03410 | 590 | Peptidase_M44: Protein G1; InterPro: IPR005072 In | 91.3 | |
| PHA03081 | 595 | putative metalloprotease; Provisional | 86.61 |
| >KOG2019 consensus Metalloendoprotease HMP1 (insulinase superfamily) [General function prediction only; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-115 Score=900.71 Aligned_cols=744 Identities=59% Similarity=0.945 Sum_probs=690.7
Q ss_pred CceeccCCCcEEEEEecCCCCCCCChhHHHHHhcccCCCCCCCCcHHHHHHhcccCcccceeecCCceEEEeccCCHHhH
Q 004392 1 MSVSNDDENKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTKDF 80 (756)
Q Consensus 1 ~~~~~~~~~~~~~~g~~~e~~~~~G~ah~lehl~~~gs~~~~~~~~~~~~l~~~~g~~~na~t~~d~t~y~~~~~~~~~~ 80 (756)
+|+.++|+|++|+++++++|++.+|++|+|||.++|||.+||.+++|++||++++.+++||+|++|+|.|+++++++++|
T Consensus 66 lhl~reD~N~vFsI~FrTpp~dstGiPHILEHtvLCGS~KYPvrdPFfkmLnrSLatFmNAfT~pD~T~yPfattN~kDf 145 (998)
T KOG2019|consen 66 LHLDREDENNVFSIVFRTPPKDSTGIPHILEHTVLCGSRKYPVRDPFFKMLNRSLATFMNAFTAPDYTFYPFATTNTKDF 145 (998)
T ss_pred EeeccCCCCceeEEEeecCCCccCCCchhhhhheeeccCcCcccChHHHHHHHHHHHHHhhccCCCcceeecccCChHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhCCCCcccccccccccceeccCCCC---CCccchhHHHHHhhhhcCChHHHHHHHHHHHhCCCCCCCCC
Q 004392 81 YNLVDVYFDAVFFPKCVEDFQTFQQEGWHFKLDNPS---EDITYKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVD 157 (756)
Q Consensus 81 ~~~l~~~~d~~~~p~~~~~~~~~~~e~~~~~~~~~~---~~~~e~~~v~~e~~~~~~~~~~~~~~~~~~~~~~~~~y~~~ 157 (756)
.++.++|+|+.+.|.+...+ |.|||||+|..++. ++..+||||++||++..++|.++.+..+++.+||++.|+..
T Consensus 146 ~NL~dVYLDAtffPklr~~d--F~QEGWr~Eh~dpsd~~SpivfkGVVfNEMKG~~S~~~~if~~~~Qq~L~p~~tYgv~ 223 (998)
T KOG2019|consen 146 YNLRDVYLDATFFPKLRKLD--FQQEGWRLEHNDPSDPISPIVFKGVVFNEMKGQYSDPDYIFGMLFQQALFPENTYGVN 223 (998)
T ss_pred HHHHHHhhhcccchHHHhhh--hhhhcceeecCCCCCCcccceeeeeeeecccccccChhHHHHHHHHHhhCcccccccc
Confidence 99999999999999999999 99999999986654 45569999999999999999999999999999999999999
Q ss_pred CCCCcCccCCCCHHHHHHHHHhhcCCCCcEEEEEeCCCHHHHHHHhh---------------------------------
Q 004392 158 SGGDPKVIPKLTFEEFKEFHRKYYHPSNARIWFYGDDDPNERLRILS--------------------------------- 204 (756)
Q Consensus 158 ~~G~~~~i~~lt~~~l~~f~~~~y~p~n~~l~v~Gd~~~~~~~~~i~--------------------------------- 204 (756)
++|+|-.|+.+|+|++++||++||||+|+.++.+||++.++.+.+++
T Consensus 224 SGGDPl~IpdLt~eelk~FHr~~YHPSNAri~tYGn~Pl~~~l~~l~e~~~~~sk~~~s~kv~~qk~f~kp~rvve~~p~ 303 (998)
T KOG2019|consen 224 SGGDPLDIPDLTYEELKEFHRQHYHPSNARIFTYGNFPLEDLLKQLEEDFSPFSKRELSSKVTFQKLFDKPRRVVEKGPA 303 (998)
T ss_pred CCCCcccCccccHHHHHHHHHhccCCCcceeEeecCchHHHHHHHHHHhhcccccccccCccccccccccCceeeeecCC
Confidence 99999999999999999999999999999999999999999999887
Q ss_pred --------------------------------------------------------------------------------
Q 004392 205 -------------------------------------------------------------------------------- 204 (756)
Q Consensus 205 -------------------------------------------------------------------------------- 204 (756)
T Consensus 304 d~~~~p~Kq~~~s~s~L~~~p~d~~etfaL~~L~~Ll~~gpsSp~yk~LiESGLGtEfsvnsG~~~~t~~~~fsVGLqGv 383 (998)
T KOG2019|consen 304 DPGDLPKKQTKCSNSFLSNDPLDTYETFALKVLSHLLLDGPSSPFYKALIESGLGTEFSVNSGYEDTTLQPQFSVGLQGV 383 (998)
T ss_pred CCCCCccceeEEEEEeecCCchhHHHHHHHHHHHHHhcCCCccHHHHHHHHcCCCcccccCCCCCcccccceeeeeeccc
Confidence
Q ss_pred -----------------------------hcccccccccccccCCCCchhhHHHHHhhhcccccCCCCccCcCcchHHHH
Q 004392 205 -----------------------------EASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMA 255 (756)
Q Consensus 205 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~ 255 (756)
++.++++|+..++..+. .|+.++..++..|.++.||++.|.++..+..
T Consensus 384 seediekve~lV~~t~~~lae~gfd~drieAil~qiEislk~qst~---fGL~L~~~i~~~W~~d~DPfE~Lk~~~~L~~ 460 (998)
T KOG2019|consen 384 SEEDIEKVEELVMNTFNKLAETGFDNDRIEAILHQIEISLKHQSTG---FGLSLMQSIISKWINDMDPFEPLKFEEQLKK 460 (998)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHhhhhhhccccc---hhHHHHHHHhhhhccCCCccchhhhhhHHHH
Confidence 22345555555533222 3888888889999999999999999999999
Q ss_pred HHHHHhccCCcchHHHHHHHhhccCCCeeEEEEecCccchhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCC
Q 004392 256 LKARLAEEGSKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELARATEELRLKQETP 335 (756)
Q Consensus 256 l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~~~~~~t~~el~~~k~~~~~~~~~~~~~ 335 (756)
|+.+++.. +..+|+.++++|+++|+|++++++.|++++.+..+..++.+|+++...+|++++..+.+....+...|++
T Consensus 461 lk~~l~ek-~~~lfq~lIkkYilnn~h~~t~smqpd~e~~~~~~~eE~tkL~ek~~alteeD~~ei~k~~~eL~~kQ~t- 538 (998)
T KOG2019|consen 461 LKQRLAEK-SKKLFQPLIKKYILNNPHCFTFSMQPDPEFAEKLEQEEATKLEEKKAALTEEDLAEIAKAGEELREKQST- 538 (998)
T ss_pred HHHHHhhh-chhHHHHHHHHHHhcCCceEEEEecCCchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhCC-
Confidence 99999864 6679999999999999999999999999999999999999999999999999999999988888888774
Q ss_pred CCccccccCCCCCCCCCCCCCCCCCCcccccCCceEEEeecCCCcEEEEEEEeeCCCCCcccccChHHHHHHhhhcCCCC
Q 004392 336 DPPEALRSVPSLSLRDIPKEPIRVPTEVGDINGVKVLQHDLFTNDVLYTEVVFDMSSLKQELLPLIPLFCQSLKEMGTKD 415 (756)
Q Consensus 336 ~~~~~l~~lp~l~~~di~~~~~~~~~~~~~~nG~~v~~~~~~~~~~v~~~~~~~~~~l~~~~~~~~~l~~~~l~~~Gt~~ 415 (756)
|++++|+|++.++|||+.+...++++...||++|..+..++||++|+++.++.++++++..||+++||..|++.||+.
T Consensus 539 --p~dlsClPtL~vsDIp~~~~~~~~~v~dingvkv~~~dl~tngi~Y~r~~~~l~~~p~eL~PylPlfc~sll~lGt~~ 616 (998)
T KOG2019|consen 539 --PEDLSCLPTLNVSDIPKTIPYTKLEVGDINGVKVQRCDLFTNGITYTRVVFDLNSLPEELLPYLPLFCQSLLNLGTGD 616 (998)
T ss_pred --ccccccccccccccCCCCCCccceeeeeccCceeEEeeccCCceEEEEEeeccccCcHHhhcchHHHHHHHHhcCCCc
Confidence 589999999999999999888888888999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcccceEEeeeeccCCCCCCCceEEEEEEEeccccHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHH
Q 004392 416 LSFVQLDQLIGRKTGGISVYPFTSSIHGKEDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARM 495 (756)
Q Consensus 416 ~~~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~ll~~~l~~p~f~~~~~~~~~~~~~~~~~ 495 (756)
.+..|+++.|...+||+|++..+++..+.+.+...+.+++.|+..+.+++++|+..++.++.|.+.++++..+.+..+++
T Consensus 617 lsf~el~qqI~rkTGGiS~~p~~~s~~~~d~p~~~i~~~~~~l~rn~~dlfel~n~il~e~~f~n~dkfkvlvk~s~s~~ 696 (998)
T KOG2019|consen 617 LSFVELEQQIGRKTGGISVSPLVSSDDGMDEPELGIVFSGSMLDRNADDLFELWNKILQETCFTNQDKFKVLVKQSASRM 696 (998)
T ss_pred ccHHHHHHHhhhhcCceeecceeccCCCCCccceeEEechhhhcCChhHHHHHHHHHhcccCcccHHHHHHHHHHHHHHh
Confidence 99999999999999999999999888888889889999999999999999999999999999998899999999999999
Q ss_pred hhhhccCcHHHHHHHHHhccChhhHHHHHhccchHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHcCCCCcEEEEEeCccc
Q 004392 496 ENRLRGSGHGIAAARMDAKLNTAGWISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREGCLINMTADGKN 575 (756)
Q Consensus 496 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~n~~i~v~Gd~~~ 575 (756)
.+.+.++||.+|..++.+++.+.+.+.++++|+++.+++.++.+..+.+++.+.+.|.++.+.+++.++|.+.|+.|-..
T Consensus 697 ~n~i~dsGH~~A~~rs~a~l~~ag~i~EqlgGl~ql~fl~~L~~~~d~d~~~i~~kL~eIrk~ll~~ng~~~~itAd~~q 776 (998)
T KOG2019|consen 697 TNGIADSGHGFAAARSAAMLTPAGWISEQLGGLSQLEFLHRLEEKVDNDWEPIVSKLTEIRKSLLNTNGMIVNITADPKQ 776 (998)
T ss_pred hccCCcccchhHhhhhhcccCcccchHhHhcchHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEecCccc
Confidence 99999999999999999999999999999999999999999999888899999999999999999999999999999977
Q ss_pred hhhHHHHHHHHHhcCCC-CCCcccccccccCCCCceEE--EeC-CCeeEEEeecccccCCCCcccHHHHHHHHhcCccch
Q 004392 576 LKNSERFVGKFLDMLPT-NSPVERVKWKAHLPSANEAI--VIP-TQVNYVGKAANIFETGYKLNGSAYVISKHISNVWLW 651 (756)
Q Consensus 576 ~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~d~~al~vl~~iLg~s~L~ 651 (756)
...+++.+++|+..+|. .+......|....+.+.+.+ .+| .||+|++.+..++++++||.++++|++.+|.+..||
T Consensus 777 ~~~vEkav~kFl~~lp~e~p~g~~st~d~r~p~~~~~i~~~~P~fqvnyvgka~~~vpyt~~d~asl~vlS~~lt~k~Lh 856 (998)
T KOG2019|consen 777 LTNVEKAVEKFLDSLPRENPSGSKSTWDARLPLRSEAIRVVIPTFQVNYVGKAGLGVPYTHPDGASLQVLSKLLTNKWLH 856 (998)
T ss_pred chhHHHHHHHHHHhccccCCCCCccCccccCCCCceeEEEeccccchhhhhhhcccccCCCCCCcHHHHHHHHHHHHHHH
Confidence 88899999999999984 33333444544444443433 567 568999999999999999999999999999999999
Q ss_pred hhhhhcCCCCCccccccCCCceEEEEEeeCCChhhHHHHHHhHHHHHhcCCCCHHHHHHHHHHHHhhcccCCChhHHHHH
Q 004392 652 DRVRVSGGAYGGFCDFDSHSGVFSFLSYRDPNLLKTLDIYDGTVDFLRELEMDDDTLTKAIIGTIGDVDAYQLPDAKGYS 731 (756)
Q Consensus 652 ~~iRekglaYg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~it~~eL~~ak~~~~~~~~~~~~~~~~~~~ 731 (756)
.+|||||||||.+|+++...|+|+|++|||||+.++++.+....++++...+++++|++||.+++++.+.+..|..++.
T Consensus 857 ~evRekGGAYGgg~s~~sh~GvfSf~SYRDpn~lktL~~f~~tgd~~~~~~~~~~dldeAkl~~f~~VDap~~P~~kG~- 935 (998)
T KOG2019|consen 857 DEVREKGGAYGGGCSYSSHSGVFSFYSYRDPNPLKTLDIFDGTGDFLRGLDVDQQDLDEAKLGTFGDVDAPQLPDAKGL- 935 (998)
T ss_pred HHHHHhcCccCCccccccccceEEEEeccCCchhhHHHhhcchhhhhhcCCccccchhhhhhhhcccccCCcCCcccch-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999984
Q ss_pred HHHHHHhCCCHHHHHHHHHHHhcCC
Q 004392 732 SLLRHLLGITEEERQRRREEILSTR 756 (756)
Q Consensus 732 ~~~~~~~g~~~~~~~~~~~~i~~vt 756 (756)
.+.++|+++++.|.+|++|++|+
T Consensus 936 --~~fl~gvtDemkQarREqll~vS 958 (998)
T KOG2019|consen 936 --LRFLLGVTDEMKQARREQLLAVS 958 (998)
T ss_pred --HHHHhcCCHHHHHHHHHHHHhhh
Confidence 44569999999999999999985
|
|
| >COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only] | Back alignment and domain information |
|---|
| >PTZ00432 falcilysin; Provisional | Back alignment and domain information |
|---|
| >KOG0961 consensus Predicted Zn2+-dependent endopeptidase, insulinase superfamily [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK15101 protease3; Provisional | Back alignment and domain information |
|---|
| >COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0959 consensus N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only] | Back alignment and domain information |
|---|
| >COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only] | Back alignment and domain information |
|---|
| >PF08367 M16C_assoc: Peptidase M16C associated; InterPro: IPR013578 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >KOG0960 consensus Mitochondrial processing peptidase, beta subunit, and related enzymes (insulinase superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF | Back alignment and domain information |
|---|
| >TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF | Back alignment and domain information |
|---|
| >KOG0960 consensus Mitochondrial processing peptidase, beta subunit, and related enzymes (insulinase superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK15101 protease3; Provisional | Back alignment and domain information |
|---|
| >PTZ00432 falcilysin; Provisional | Back alignment and domain information |
|---|
| >KOG2067 consensus Mitochondrial processing peptidase, alpha subunit [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG2067 consensus Mitochondrial processing peptidase, alpha subunit [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification | Back alignment and domain information |
|---|
| >PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0959 consensus N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG2583 consensus Ubiquinol cytochrome c reductase, subunit QCR2 [Energy production and conversion] | Back alignment and domain information |
|---|
| >COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only] | Back alignment and domain information |
|---|
| >KOG2583 consensus Ubiquinol cytochrome c reductase, subunit QCR2 [Energy production and conversion] | Back alignment and domain information |
|---|
| >PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification | Back alignment and domain information |
|---|
| >KOG2019 consensus Metalloendoprotease HMP1 (insulinase superfamily) [General function prediction only; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0961 consensus Predicted Zn2+-dependent endopeptidase, insulinase superfamily [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >PF03410 Peptidase_M44: Protein G1; InterPro: IPR005072 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >PHA03081 putative metalloprotease; Provisional | Back alignment and domain information |
|---|
| >PF03410 Peptidase_M44: Protein G1; InterPro: IPR005072 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >PHA03081 putative metalloprotease; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 756 | ||||
| 2fge_A | 995 | Crystal Structure Of Presequence Protease Prep From | 0.0 | ||
| 3s5h_A | 1193 | Crystal Structures Of Falcilysin, A M16 Metalloprot | 1e-44 | ||
| 3s5h_A | 1193 | Crystal Structures Of Falcilysin, A M16 Metalloprot | 5e-32 |
| >pdb|2FGE|A Chain A, Crystal Structure Of Presequence Protease Prep From Arabidopsis Thaliana Length = 995 | Back alignment and structure |
|
| >pdb|3S5H|A Chain A, Crystal Structures Of Falcilysin, A M16 Metalloprotease From The Malaria Parasite Plasmodium Falciparum Length = 1193 | Back alignment and structure |
| >pdb|3S5H|A Chain A, Crystal Structures Of Falcilysin, A M16 Metalloprotease From The Malaria Parasite Plasmodium Falciparum Length = 1193 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2fge_A Atprep2;, zinc metalloprotease (insulinase family); peptidasome, protease-peptide complex, hydrolase, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Length = 995 | Back alignment and structure |
|---|
Score = 487 bits (1254), Expect = e-159
Identities = 445/551 (80%), Positives = 498/551 (90%)
Query: 205 EASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEG 264
EASMNTIEFSLRENNTGSFPRGLSLML+S+ KWIYDM+PFEPLKY +PL ALK R+AEEG
Sbjct: 398 EASMNTIEFSLRENNTGSFPRGLSLMLQSISKWIYDMDPFEPLKYTEPLKALKTRIAEEG 457
Query: 265 SKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELARA 324
SKAVFSPLIEK ILNN H VT+EMQPDPEKA+++E EK IL KVK++MT+EDLAELARA
Sbjct: 458 SKAVFSPLIEKLILNNSHRVTIEMQPDPEKATQEEVEEKNILEKVKAAMTEEDLAELARA 517
Query: 325 TEELRLKQETPDPPEALRSVPSLSLRDIPKEPIRVPTEVGDINGVKVLQHDLFTNDVLYT 384
TEEL+LKQETPDPPEALR VPSL+L DIPKEP VPTEVGDINGVKVL+HDLFTND++YT
Sbjct: 518 TEELKLKQETPDPPEALRCVPSLNLGDIPKEPTYVPTEVGDINGVKVLRHDLFTNDIIYT 577
Query: 385 EVVFDMSSLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPFTSSIHGK 444
EVVFD+ SLK ELLPL+PLFCQSL EMGTKDL+FVQL+QLIGRKTGGISVYP TSS+ GK
Sbjct: 578 EVVFDIGSLKHELLPLVPLFCQSLLEMGTKDLTFVQLNQLIGRKTGGISVYPLTSSVRGK 637
Query: 445 EDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMENRLRGSGH 504
++PC ++VRGK+MAG+A+DLFNL NC+LQEVQ TDQQRFKQFVSQS+ARMENRLRGSGH
Sbjct: 638 DEPCSKIIVRGKSMAGRADDLFNLMNCLLQEVQFTDQQRFKQFVSQSRARMENRLRGSGH 697
Query: 505 GIAAARMDAKLNTAGWISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREG 564
GIAAARMDA LN AGW+SEQMGG+SYLEFL LE+KVD+DW GISSSLEEIRRS L+R G
Sbjct: 698 GIAAARMDAMLNIAGWMSEQMGGLSYLEFLHTLEKKVDEDWEGISSSLEEIRRSLLARNG 757
Query: 565 CLINMTADGKNLKNSERFVGKFLDMLPTNSPVERVKWKAHLPSANEAIVIPTQVNYVGKA 624
C++NMTADGK+L N E+ V KFLD+LP N V W LP NEAIVIPTQVNYVGKA
Sbjct: 758 CIVNMTADGKSLTNVEKSVAKFLDLLPENPSGGLVTWDGRLPLRNEAIVIPTQVNYVGKA 817
Query: 625 ANIFETGYKLNGSAYVISKHISNVWLWDRVRVSGGAYGGFCDFDSHSGVFSFLSYRDPNL 684
NI+ TGY+L+GSAYVISKHISN WLWDRVRVSGGAYGGFCDFDSHSGVFS+LSYRDPNL
Sbjct: 818 GNIYSTGYELDGSAYVISKHISNTWLWDRVRVSGGAYGGFCDFDSHSGVFSYLSYRDPNL 877
Query: 685 LKTLDIYDGTVDFLRELEMDDDTLTKAIIGTIGDVDAYQLPDAKGYSSLLRHLLGITEEE 744
LKTLDIYDGT DFLR L++D +TLTKAIIGTIGDVD+YQLPDAKGYSSLLRHLLG+T+EE
Sbjct: 878 LKTLDIYDGTGDFLRGLDVDQETLTKAIIGTIGDVDSYQLPDAKGYSSLLRHLLGVTDEE 937
Query: 745 RQRRREEILST 755
RQR+REEIL+T
Sbjct: 938 RQRKREEILTT 948
|
| >2fge_A Atprep2;, zinc metalloprotease (insulinase family); peptidasome, protease-peptide complex, hydrolase, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Length = 995 | Back alignment and structure |
|---|
| >3s5m_A Falcilysin; M16 metalloprotease, peptidase, hydrolase; 1.55A {Plasmodium falciparum} PDB: 3s5i_A 3s5k_A 3s5h_A Length = 1193 | Back alignment and structure |
|---|
| >3s5m_A Falcilysin; M16 metalloprotease, peptidase, hydrolase; 1.55A {Plasmodium falciparum} PDB: 3s5i_A 3s5k_A 3s5h_A Length = 1193 | Back alignment and structure |
|---|
| >3gwb_A Peptidase M16 inactive domain family protein; peptidase M16 family, PFL_5859, structural genomics, PSI-2, structure initiative; 1.90A {Pseudomonas fluorescens} Length = 434 | Back alignment and structure |
|---|
| >1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Length = 939 | Back alignment and structure |
|---|
| >3amj_B Zinc peptidase inactive subunit; alpha/beta, zinc binding, hydrolase; 3.00A {Sphingomonas} Length = 424 | Back alignment and structure |
|---|
| >3cww_A Insulysin, insulin-degrading enzyme, insulinase; A-beta degrading enzyme, criptidase, kinins, hydrolase; 1.96A {Homo sapiens} PDB: 3ofi_A 2wc0_A 3h44_A 3n56_A 3n57_A 2wby_A 3qz2_A 3e4z_A 2wk3_A 3e4a_A* 2g47_A 2g48_A 2g49_A 2g54_A 2g56_A 2jbu_A 3e50_A 2jg4_A 3hgz_A 2yb3_A* ... Length = 990 | Back alignment and structure |
|---|
| >3d3y_A Uncharacterized protein; APC29635, conserved protein, enterococcus faecalis V583, STR genomics, PSI-2, protein structure initiative; 1.95A {Enterococcus faecalis} Length = 425 | Back alignment and structure |
|---|
| >3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C Length = 445 | Back alignment and structure |
|---|
| >3go9_A Insulinase family protease; IDP00573, structural genomics, for structural genomics of infectious diseases, csgid, HYDR; HET: MSE; 1.62A {Yersinia pestis} Length = 492 | Back alignment and structure |
|---|
| >3hdi_A Processing protease; CAGE structure, M16B peptidase, metallopeptidase, peptidasome, protease, hydrolase; 2.70A {Bacillus halodurans c-125} Length = 421 | Back alignment and structure |
|---|
| >1pp9_A Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_A* 1be3_A* 1l0n_A* 1ntk_A* 1ntm_A* 1ntz_A* 1nu1_A* 1l0l_A* 1ppj_A* 1sqq_A* 1sqv_A* 1sqx_A* 2a06_A* 2fyu_A* 2ybb_A* 1sqb_A* 1sqp_A* 1qcr_A* 1bcc_A* 2bcc_A* ... Length = 446 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1hr6_B Beta-MPP, mitochondrial processing peptidase beta subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_B 1hr8_B* 1hr9_B* Length = 443 | Back alignment and structure |
|---|
| >3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus} Length = 406 | Back alignment and structure |
|---|
| >1hr6_A Alpha-MPP, mitochondrial processing peptidase alpha subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_A 1hr8_A* 1hr9_A* Length = 475 | Back alignment and structure |
|---|
| >3cx5_A Cytochrome B-C1 complex subunit 1, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1p84_A* 2ibz_A* 1kb9_A* 3cxh_A* 1ezv_A* 1kyo_A* Length = 431 | Back alignment and structure |
|---|
| >1pp9_B Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_B* 1be3_B* 1l0n_B* 1ntk_B* 1ntm_B* 1ntz_B* 1nu1_B* 1l0l_B* 1ppj_B* 1sqq_B* 1sqv_B* 1sqx_B* 2a06_B* 2fyu_B* 2ybb_B* 1sqb_B* 1sqp_B* 1qcr_B* 2bcc_B* 3bcc_B* ... Length = 439 | Back alignment and structure |
|---|
| >3cx5_B Cytochrome B-C1 complex subunit 2, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1kb9_B* 1kyo_B* 1p84_B* 2ibz_B* 1ezv_B* 3cxh_B* Length = 352 | Back alignment and structure |
|---|
| >1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 756 | |||
| 3s5m_A | 1193 | Falcilysin; M16 metalloprotease, peptidase, hydrol | 100.0 | |
| 2fge_A | 995 | Atprep2;, zinc metalloprotease (insulinase family) | 100.0 | |
| 3cww_A | 990 | Insulysin, insulin-degrading enzyme, insulinase; A | 100.0 | |
| 1q2l_A | 939 | Protease III; hydrolase; 2.20A {Escherichia coli s | 100.0 | |
| 3eoq_A | 406 | Putative zinc protease; two similar domains of bet | 100.0 | |
| 3hdi_A | 421 | Processing protease; CAGE structure, M16B peptidas | 100.0 | |
| 3gwb_A | 434 | Peptidase M16 inactive domain family protein; pept | 100.0 | |
| 1hr6_B | 443 | Beta-MPP, mitochondrial processing peptidase beta | 100.0 | |
| 1pp9_A | 446 | Ubiquinol-cytochrome C reductase complex core Pro | 100.0 | |
| 3ami_A | 445 | Zinc peptidase; alpha/beta, zinc binding, hydrolas | 100.0 | |
| 3amj_B | 424 | Zinc peptidase inactive subunit; alpha/beta, zinc | 100.0 | |
| 3d3y_A | 425 | Uncharacterized protein; APC29635, conserved prote | 100.0 | |
| 1hr6_A | 475 | Alpha-MPP, mitochondrial processing peptidase alph | 100.0 | |
| 1pp9_B | 439 | Ubiquinol-cytochrome C reductase complex core Pro | 100.0 | |
| 3cx5_A | 431 | Cytochrome B-C1 complex subunit 1, mitochondrial; | 100.0 | |
| 3eoq_A | 406 | Putative zinc protease; two similar domains of bet | 100.0 | |
| 3go9_A | 492 | Insulinase family protease; IDP00573, structural g | 100.0 | |
| 3ami_A | 445 | Zinc peptidase; alpha/beta, zinc binding, hydrolas | 100.0 | |
| 3hdi_A | 421 | Processing protease; CAGE structure, M16B peptidas | 99.97 | |
| 1pp9_A | 446 | Ubiquinol-cytochrome C reductase complex core Pro | 99.97 | |
| 1q2l_A | 939 | Protease III; hydrolase; 2.20A {Escherichia coli s | 99.97 | |
| 3cww_A | 990 | Insulysin, insulin-degrading enzyme, insulinase; A | 99.97 | |
| 1hr6_A | 475 | Alpha-MPP, mitochondrial processing peptidase alph | 99.97 | |
| 1hr6_B | 443 | Beta-MPP, mitochondrial processing peptidase beta | 99.96 | |
| 3s5m_A | 1193 | Falcilysin; M16 metalloprotease, peptidase, hydrol | 99.96 | |
| 3cx5_B | 352 | Cytochrome B-C1 complex subunit 2, mitochondrial; | 99.95 | |
| 3go9_A | 492 | Insulinase family protease; IDP00573, structural g | 99.95 | |
| 3gwb_A | 434 | Peptidase M16 inactive domain family protein; pept | 99.95 | |
| 3amj_B | 424 | Zinc peptidase inactive subunit; alpha/beta, zinc | 99.95 | |
| 1pp9_B | 439 | Ubiquinol-cytochrome C reductase complex core Pro | 99.95 | |
| 2fge_A | 995 | Atprep2;, zinc metalloprotease (insulinase family) | 99.94 | |
| 3cx5_A | 431 | Cytochrome B-C1 complex subunit 1, mitochondrial; | 99.94 | |
| 3cx5_B | 352 | Cytochrome B-C1 complex subunit 2, mitochondrial; | 99.93 | |
| 3d3y_A | 425 | Uncharacterized protein; APC29635, conserved prote | 99.93 | |
| 3ih6_A | 197 | Putative zinc protease; bordetella pertussis toham | 99.62 | |
| 3ih6_A | 197 | Putative zinc protease; bordetella pertussis toham | 96.61 |
| >3s5m_A Falcilysin; M16 metalloprotease, peptidase, hydrolase; 1.55A {Plasmodium falciparum} PDB: 3s5i_A 3s5k_A 3s5h_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-101 Score=917.36 Aligned_cols=752 Identities=28% Similarity=0.464 Sum_probs=657.9
Q ss_pred CceeccCC---CcEEEEEecCCCCCCCChhHHHHHhcccCCCCCCCCcHHHHHHhcccCcccceeecCCceEEEeccCCH
Q 004392 1 MSVSNDDE---NKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNT 77 (756)
Q Consensus 1 ~~~~~~~~---~~~~~~g~~~e~~~~~G~ah~lehl~~~gs~~~~~~~~~~~~l~~~~g~~~na~t~~d~t~y~~~~~~~ 77 (756)
+|+.++++ +++|.+|+++||++++|+|||+|||+|+||++||..+++.++..+++|+++||+|++|+|+|++.+.+.
T Consensus 99 l~i~~~~~~~~~~~f~vg~~tep~~~~GvAH~lEHmlf~GS~k~p~~e~~~~l~~~slG~~lNA~T~~D~T~Y~~~~~~~ 178 (1193)
T 3s5m_A 99 ISLGTNDPLDVEQAFAFYVKTLTHSGKGIPHILEHSVLSGSKNYNYKNSIGLLEKGTLHTHLNAYTFNDRTVYMAGSMNN 178 (1193)
T ss_dssp EEEEECCTTCCCEEEEEEEECCCSSSSCHHHHHHHHTTSCBTTBCCTTHHHHHHHSCCEEEEEEEECSSEEEEEEEESSH
T ss_pred EEEECCCCCeEEEEEEEEECCCCCCCchHHHHHHHHHhCCCCCCChhhHHHHHHHhccCceEEeEEcCCeEEEEEEecCH
Confidence 35666665 478999999999999999999999999999999999999888766799999999999999999987778
Q ss_pred HhHHHHHHHHHhhhhCCCCcccccccccccceeccCCC--------------CCCccchhHHHHHhhhhcCChHHHHHHH
Q 004392 78 KDFYNLVDVYFDAVFFPKCVEDFQTFQQEGWHFKLDNP--------------SEDITYKGVVFNEMKGVYSQPDNILGRA 143 (756)
Q Consensus 78 ~~~~~~l~~~~d~~~~p~~~~~~~~~~~e~~~~~~~~~--------------~~~~~e~~~v~~e~~~~~~~~~~~~~~~ 143 (756)
+++.++|++++|++++|.|.+++.+|.+|+||+|+++. +.+...|++|++||++..++|..++.+.
T Consensus 179 ~~l~~~L~l~~D~v~~P~l~~~~~~F~qE~~~~E~e~~~~~Er~~~~~~~~~~~~l~~k~vV~~E~k~~~~~p~~~~~~~ 258 (1193)
T 3s5m_A 179 KDFFNIMGVYMDSVFQPNVLENKYIFETEGWTYEVEKLKEDEKGKAEIPQMKDYKVSFNGIVYNEMKGALSSPLEDLYHE 258 (1193)
T ss_dssp HHHHHHHHHHHHHHHSBGGGTCHHHHHHHTCEEEEEECCTTTTTCTTSCEETTEEEEEECHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCccccchhhhhhhhhhhhccchhhhccccccccccchhhHHHHHHHHHHHhhCCHHHHHHHH
Confidence 99999999999999999999988889999999988531 2234558999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCCCcCccCCCCHHHHHHHHHhhcCCCCcEEEEEeCCCHHHHHHHhhhcccccc------------
Q 004392 144 AQQALFPDNAYGVDSGGDPKVIPKLTFEEFKEFHRKYYHPSNARIWFYGDDDPNERLRILSEASMNTI------------ 211 (756)
Q Consensus 144 ~~~~~~~~~~y~~~~~G~~~~i~~lt~~~l~~f~~~~y~p~n~~l~v~Gd~~~~~~~~~i~~~~~~~~------------ 211 (756)
+.+.+||+|||+++++|++++|+++|+++|++||++||+|+||+|+++||+|++++++++++. |+.+
T Consensus 259 l~~~lf~~hpY~~~~~G~~e~I~~lt~edl~~F~~~~Y~P~Na~l~v~Gdid~~~~~~~v~~~-f~~~~~~~~~~~~~~~ 337 (1193)
T 3s5m_A 259 EMKYMFPDNVHSNNSGGDPKEITNLTYEEFKEFYYKNYNPKKVKVFFFSKNNPTELLNFVDQY-LGQLDYSKYRDDAVES 337 (1193)
T ss_dssp HHHHHCTTSGGGSCTTCCHHHHTTCCHHHHHHHHHHHSCTTTCEEEEEESSCTHHHHHHHHHH-HTTCCGGGCCCCCCCC
T ss_pred HHHHhCCCCCCCCCCCCCHHHHhhCCHHHHHHHHHHhcCccceEEEEEecCCHHHHHHHHHHH-hccCCCCCCCcccccc
Confidence 999999999999999999999999999999999999999999999999999999999998721 1000
Q ss_pred ---------------cc-------------------------c-----------------------------ccc-----
Q 004392 212 ---------------EF-------------------------S-----------------------------LRE----- 217 (756)
Q Consensus 212 ---------------~~-------------------------~-----------------------------~~~----- 217 (756)
++ . ..+
T Consensus 338 ~~~~~~~~~~~~v~~~~~~~~~~~q~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~d~~al~ 417 (1193)
T 3s5m_A 338 VEYQTYKKGPFYIKKKYGDHSEEKENLVSVAWLLNPKVDKTNNHNNNHSNNQSSENNGYSNGSHSSDLSLENPTDYFVLL 417 (1193)
T ss_dssp CCCCBCCCCCEEEEEEEECCCSSCCEEEEEEEESSCBCC----------------------CCCCSTTCCCSHHHHHHHH
T ss_pred cCCCCCCCCCeEEEEecCCCCCccccEEEEEEEecCcccccccccccccccccccccccccccccccccccCccHHHHHH
Confidence 00 0 000
Q ss_pred ---------------------------c-------------------CCC-C--------c-------------------
Q 004392 218 ---------------------------N-------------------NTG-S--------F------------------- 223 (756)
Q Consensus 218 ---------------------------~-------------------~~~-~--------~------------------- 223 (756)
. ... . .
T Consensus 418 vL~~iLggg~sSrL~~~L~e~gLa~~v~~~~~~~~~~~~~f~i~~~g~~~~~~~~~~~~~~~~~~~~~I~~~L~~l~~~g 497 (1193)
T 3s5m_A 418 IINNLLIHTPESVLYKALTDCGLGNNVIDRGLNDSLVQYIFSIGLKGIKRNNEKIKNFDKVHYEVEDVIMNALKKVVKEG 497 (1193)
T ss_dssp HHHHHHHSSTTSHHHHHHHHHCSCSEEEEEEEECSSSSCEEEEEEEEECTTCTTCSCGGGHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHCCCCCCHHHHHHHhcCCeeeecccccccccCCcEEEEEEecCChhhccccchhhHHHHHHHHHHHHHHHHHHcC
Confidence 0 000 0 0
Q ss_pred ------------------------hhhHHHHHhhhcccccCCCCccCcCcchHHHHHHHHHhccCCcchHHHHHHHhhcc
Q 004392 224 ------------------------PRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEKYILN 279 (756)
Q Consensus 224 ------------------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~~~ 279 (756)
|.|+.++..+.+.|.+++||...+++...+..|++.+.. ++.+|++++++||++
T Consensus 498 i~~~ele~a~~~le~~~re~~~~~~~gl~~~~~~~~~w~~~~dp~~~l~~~~~l~~l~~~~~~--~~~~~~~li~~yll~ 575 (1193)
T 3s5m_A 498 FNKSAVEASINNIEFILKEANLKTSKSIDFVFEMTSKLNYNRDPLLIFEFEKYLNIVKNKIKN--EPMYLEKFVEKHFIN 575 (1193)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTSTTHHHHHHHHHHHHHHTTCCTTTTTSHHHHHHHHHHHHHH--STTHHHHHHHHHTTT
T ss_pred CCHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhc--ChHHHHHHHHHHhcc
Confidence 001111122345788999999999999999999998864 356999999999999
Q ss_pred CCCeeEEEEecCccchhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCCCCccccccCCCCCCCCCCCCCCCC
Q 004392 280 NPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELARATEELRLKQETPDPPEALRSVPSLSLRDIPKEPIRV 359 (756)
Q Consensus 280 ~~~~~~~~~~p~~~~~~~~~~~~~e~l~~~~~~~t~~el~~~k~~~~~~~~~~~~~~~~~~l~~lp~l~~~di~~~~~~~ 359 (756)
|.|++++++.|+.++.+..++.+++.|+.++..+|++|++++.++.+.+..+|+.+++++++++||.++++||++....+
T Consensus 576 n~~~~~~~~~P~~~~~~~~~~~e~~~L~~~~~~ls~~~~~~i~~~~~~L~~~q~~~~~~e~l~~lP~l~~~Di~~~~~~~ 655 (1193)
T 3s5m_A 576 NAHRSVILLEGDENYAQEQENLEKQELKKRIENFNEQEKEQVIKNFEELSKYKNAEESPEHLNKFPIISISDLNKKTLEV 655 (1193)
T ss_dssp CCCEEEEEEEEESSHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHTTSCCCCGGGSCSSCCCC
T ss_pred CCceEEEEEEcCCCHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHhCCCChhhHHhCCcCcHHHcCCCcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred CCcc--------------------------------------------------------------cccCCceEEEeecC
Q 004392 360 PTEV--------------------------------------------------------------GDINGVKVLQHDLF 377 (756)
Q Consensus 360 ~~~~--------------------------------------------------------------~~~nG~~v~~~~~~ 377 (756)
|..+ ...||++|++++.+
T Consensus 656 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~ 735 (1193)
T 3s5m_A 656 PVNVYFTNINENNNIMETYNKLKTNEHMLKDNMDVFLKKYVLKNDKHNTNNNNNNNNNMDYSFTETKYEGNVPILVYEMP 735 (1193)
T ss_dssp CCEEEEECTTTCSCHHHHHHHHHTCHHHHHHHHHHHHHHHTTC---------------------CCTTTTCEEEEEEECC
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccCCeEEEEEECC
Confidence 7662 01379999999999
Q ss_pred CCcEEEEEEEeeCCCCCcccccChHHHHHHhhhcCCCCCCHHHHHHHHhhcccceEEeeeeccCC------CCCCCceEE
Q 004392 378 TNDVLYTEVVFDMSSLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPFTSSIH------GKEDPCCCM 451 (756)
Q Consensus 378 ~~~~v~~~~~~~~~~l~~~~~~~~~l~~~~l~~~Gt~~~~~~el~~~i~~~~g~~~~~~~~~~~~------~~~~~~~~~ 451 (756)
|||++|++++|+++.+++++.+++++|+.+|++.||+++++.|+++.++.++||++++++..+.. +.....+++
T Consensus 736 TNGIvY~~l~fdl~~l~~e~l~yl~Lf~~~L~~lGT~~~sy~el~~~i~~~tGGis~s~~~~~~~~~~~~~~~~~~~~~~ 815 (1193)
T 3s5m_A 736 TTGIVYLQFVFSLDHLTVDELAYLNLFKTLILENKTNKRSSEDFVILREKNIGSMSANVALYSKDDHLNVTDKYNAQALF 815 (1193)
T ss_dssp CTTEEEEEEEEECTTCCHHHHTTHHHHHHHTTTCCBSSSCHHHHHHHHHHHCSEEEEEEEEECCCBTTBCCCTTCCEEEE
T ss_pred CCCeEEEEEEEECCCCCHHHHhhHHHHHHHHHhCCCCCCCHHHHHHHHHHhCCceEEEeeeecccccccccccccccceE
Confidence 99999999999999999899999999999999999999999999999999999999998754321 112237889
Q ss_pred EEEEEeccccHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHhhhhccCcHHHHHHHHHhccChhhHHHHHhccchHH
Q 004392 452 VVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMENRLRGSGHGIAAARMDAKLNTAGWISEQMGGVSYL 531 (756)
Q Consensus 452 ~~~~~~l~~~l~~~l~ll~~~l~~p~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~~ 531 (756)
.++++|+.++++++++|+.++|.+|.|++.+|+++++.+.++.+++.+.++||.+|..++.+.+++.+++.+.++|++++
T Consensus 816 ~vs~kaL~~n~~~~~~Ll~eiL~~~~F~d~eRlk~ll~~~ks~le~~i~~sGH~~A~~ra~s~~s~~~~~~e~~~Gl~~~ 895 (1193)
T 3s5m_A 816 NLEMHVLSHKCNDALNIALEAVKESDFSNKKKVIDILKRKINGMKTTFSEKGYAILMKYVKAHLNSKHYAHNIIYGYENY 895 (1193)
T ss_dssp EEEEEEEGGGHHHHHHHHHHHHHSBCTTCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTTTTCHHHHHHHHHHSHHHH
T ss_pred EEEEEEhhhcHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHhcCcchhhhhhhCChHHH
Confidence 99999999999999999999999999999789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHHcCCCCcEEEEEeCccchhhHHHHHHHHHhcCCCC----CC----------cc
Q 004392 532 EFLQALEEKVDQDWAGISSSLEEIRRSFLSREGCLINMTADGKNLKNSERFVGKFLDMLPTN----SP----------VE 597 (756)
Q Consensus 532 ~~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~n~~i~v~Gd~~~~~~~~~~~~~~~~~l~~~----~~----------~~ 597 (756)
.+++++.+.++++++.+.++|+++|+++|+++|++++|+|+.+..+++.+.++++++.|+.. .. ..
T Consensus 896 ~fl~~l~~~~e~~~~~l~~~L~~i~~~if~~~nl~vsvtg~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 975 (1193)
T 3s5m_A 896 LKLQEQLELAENDFKTLENILVRIRNKIFNKKNLMVSVTSDYGALKHLFVNSNESLKNLVSYFEENDKYINDMQNKVNDP 975 (1193)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHHSCSTTEEEEEEECGGGTHHHHTTTHHHHHHHHHHHHHGGGGSCCCCSSSCCC
T ss_pred HHHHHHHHhhHhhHHHHHHHHHHHHHHHcCCCCeEEEEEeChhhHHHHHHHHHHHHHhhhhccccccccccccccccccc
Confidence 99999988888999999999999999999999999999999976667776666666555310 00 00
Q ss_pred -ccccc---------ccCCCCceEEEeCCCeeEEEeecccccCCCCcccHHHHHHHHhcCccchhhhhhcCCCCCccccc
Q 004392 598 -RVKWK---------AHLPSANEAIVIPTQVNYVGKAANIFETGYKLNGSAYVISKHISNVWLWDRVRVSGGAYGGFCDF 667 (756)
Q Consensus 598 -~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~al~vl~~iLg~s~L~~~iRekglaYg~~~~~ 667 (756)
...+. ......++.+..|.+|+|++.+++..+.++++++++.|++.|||++|||++|||||||||+++++
T Consensus 976 ~~~~~~~~~~~~~~~~~~~~~~e~~~~p~~v~yv~~~~~~~~~~~~d~~al~Vl~~iLg~~~L~~eIREkgGAYg~~s~~ 1055 (1193)
T 3s5m_A 976 TVMGWNEEIKSKKLFDEEKVKKEFFVLPTFVNSVSMSGILFKPGEYLDPSFTVIVAALKNSYLWDTVRGLNGAYGVFADI 1055 (1193)
T ss_dssp CCCCHHHHHHHTTCCCTTCCEEEEEECCCSSBEEEEEEECSCTTCBCCTHHHHHHHHHHHTHHHHHHTTTTCCSEEEEEE
T ss_pred cccccccccccccccccccccceeEecCCcceEEEEEecCCCCCCCchHHHHHHHHHHCccHHHHHHHhcCCeeEEEEec
Confidence 00010 01123456778899999999999999999999999999999999899999999999999999999
Q ss_pred cCCCceEEEEEeeCCChhhHHHHHHhHHHHHhc--CCCCHHHHHHHHHHHHhhcccCCChhHHHHHHHHHHHhCCCHHHH
Q 004392 668 DSHSGVFSFLSYRDPNLLKTLDIYDGTVDFLRE--LEMDDDTLTKAIIGTIGDVDAYQLPDAKGYSSLLRHLLGITEEER 745 (756)
Q Consensus 668 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~it~~eL~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 745 (756)
+ ..|.|.|++|++|++.++++++.++++++++ .++|++||++||.+++++++.+.+|...+.+.+..+++|++.+++
T Consensus 1056 ~-~~G~f~~~syrdp~~~~tl~~~~~~~~~l~~~~~~~teeEL~~ak~~~~~~~d~p~~p~~~a~~~~~~~~~Gl~~d~~ 1134 (1193)
T 3s5m_A 1056 E-YDGSVVFLSARDPNLEKTLATFRESAKGLRKMADTMTENDLLRYIINTIGTIDKPRRGIELSKLSFLRLISNESEQDR 1134 (1193)
T ss_dssp C-TTSEEEEEEESBSCSHHHHHHHHTHHHHHHHHHHHCCHHHHHHHHHHHHHHHSCCCCTHHHHHHHHHHHHTTCCHHHH
T ss_pred c-CCCcEEEEEEeCCCHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHcCcCHHHH
Confidence 8 8899999999999999999999999999987 689999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCC
Q 004392 746 QRRREEILSTR 756 (756)
Q Consensus 746 ~~~~~~i~~vt 756 (756)
++++++|++||
T Consensus 1135 ~~~~~~I~aVT 1145 (1193)
T 3s5m_A 1135 VEFRKRIMNTK 1145 (1193)
T ss_dssp HHHHHHHHTCC
T ss_pred HHHHHHHHcCC
Confidence 99999999997
|
| >2fge_A Atprep2;, zinc metalloprotease (insulinase family); peptidasome, protease-peptide complex, hydrolase, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 | Back alignment and structure |
|---|
| >3cww_A Insulysin, insulin-degrading enzyme, insulinase; A-beta degrading enzyme, criptidase, kinins, hydrolase; 1.96A {Homo sapiens} PDB: 3ofi_A 2wc0_A 3h44_A 3n56_A 3n57_A 2wby_A 3qz2_A 3e4z_A 2wk3_A 3e4a_A* 2g47_A 2g48_A 2g49_A 2g54_A 2g56_A 2jbu_A 3e50_A 2jg4_A 3hgz_A 2yb3_A* ... | Back alignment and structure |
|---|
| >1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 | Back alignment and structure |
|---|
| >3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus} | Back alignment and structure |
|---|
| >3hdi_A Processing protease; CAGE structure, M16B peptidase, metallopeptidase, peptidasome, protease, hydrolase; 2.70A {Bacillus halodurans c-125} | Back alignment and structure |
|---|
| >3gwb_A Peptidase M16 inactive domain family protein; peptidase M16 family, PFL_5859, structural genomics, PSI-2, structure initiative; 1.90A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
| >1hr6_B Beta-MPP, mitochondrial processing peptidase beta subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_B 1hr8_B* 1hr9_B* | Back alignment and structure |
|---|
| >1pp9_A Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_A* 1be3_A* 1l0n_A* 1ntk_A* 1ntm_A* 1ntz_A* 1nu1_A* 1l0l_A* 1ppj_A* 1sqq_A* 1sqv_A* 1sqx_A* 2a06_A* 2fyu_A* 2ybb_A* 1sqb_A* 1sqp_A* 1qcr_A* 1bcc_A* 2bcc_A* ... | Back alignment and structure |
|---|
| >3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C | Back alignment and structure |
|---|
| >3amj_B Zinc peptidase inactive subunit; alpha/beta, zinc binding, hydrolase; 3.00A {Sphingomonas} | Back alignment and structure |
|---|
| >3d3y_A Uncharacterized protein; APC29635, conserved protein, enterococcus faecalis V583, STR genomics, PSI-2, protein structure initiative; 1.95A {Enterococcus faecalis} | Back alignment and structure |
|---|
| >1hr6_A Alpha-MPP, mitochondrial processing peptidase alpha subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_A 1hr8_A* 1hr9_A* | Back alignment and structure |
|---|
| >1pp9_B Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_B* 1be3_B* 1l0n_B* 1ntk_B* 1ntm_B* 1ntz_B* 1nu1_B* 1l0l_B* 1ppj_B* 1sqq_B* 1sqv_B* 1sqx_B* 2a06_B* 2fyu_B* 2ybb_B* 1sqb_B* 1sqp_B* 1qcr_B* 2bcc_B* 3bcc_B* ... | Back alignment and structure |
|---|
| >3cx5_A Cytochrome B-C1 complex subunit 1, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1p84_A* 2ibz_A* 1kb9_A* 3cxh_A* 1ezv_A* 1kyo_A* | Back alignment and structure |
|---|
| >3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus} | Back alignment and structure |
|---|
| >3go9_A Insulinase family protease; IDP00573, structural genomics, for structural genomics of infectious diseases, csgid, HYDR; HET: MSE; 1.62A {Yersinia pestis} | Back alignment and structure |
|---|
| >3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C | Back alignment and structure |
|---|
| >3hdi_A Processing protease; CAGE structure, M16B peptidase, metallopeptidase, peptidasome, protease, hydrolase; 2.70A {Bacillus halodurans c-125} | Back alignment and structure |
|---|
| >1pp9_A Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_A* 1be3_A* 1l0n_A* 1ntk_A* 1ntm_A* 1ntz_A* 1nu1_A* 1l0l_A* 1ppj_A* 1sqq_A* 1sqv_A* 1sqx_A* 2a06_A* 2fyu_A* 2ybb_A* 1sqb_A* 1sqp_A* 1qcr_A* 1bcc_A* 2bcc_A* ... | Back alignment and structure |
|---|
| >1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 | Back alignment and structure |
|---|
| >3cww_A Insulysin, insulin-degrading enzyme, insulinase; A-beta degrading enzyme, criptidase, kinins, hydrolase; 1.96A {Homo sapiens} PDB: 3ofi_A 2wc0_A 3h44_A 3n56_A 3n57_A 2wby_A 3qz2_A 3e4z_A 2wk3_A 3e4a_A* 2g47_A 2g48_A 2g49_A 2g54_A 2g56_A 2jbu_A 3e50_A 2jg4_A 3hgz_A 2yb3_A* ... | Back alignment and structure |
|---|
| >1hr6_A Alpha-MPP, mitochondrial processing peptidase alpha subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_A 1hr8_A* 1hr9_A* | Back alignment and structure |
|---|
| >1hr6_B Beta-MPP, mitochondrial processing peptidase beta subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_B 1hr8_B* 1hr9_B* | Back alignment and structure |
|---|
| >3s5m_A Falcilysin; M16 metalloprotease, peptidase, hydrolase; 1.55A {Plasmodium falciparum} PDB: 3s5i_A 3s5k_A 3s5h_A | Back alignment and structure |
|---|
| >3cx5_B Cytochrome B-C1 complex subunit 2, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1kb9_B* 1kyo_B* 1p84_B* 2ibz_B* 1ezv_B* 3cxh_B* | Back alignment and structure |
|---|
| >3go9_A Insulinase family protease; IDP00573, structural genomics, for structural genomics of infectious diseases, csgid, HYDR; HET: MSE; 1.62A {Yersinia pestis} | Back alignment and structure |
|---|
| >3gwb_A Peptidase M16 inactive domain family protein; peptidase M16 family, PFL_5859, structural genomics, PSI-2, structure initiative; 1.90A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
| >3amj_B Zinc peptidase inactive subunit; alpha/beta, zinc binding, hydrolase; 3.00A {Sphingomonas} | Back alignment and structure |
|---|
| >1pp9_B Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_B* 1be3_B* 1l0n_B* 1ntk_B* 1ntm_B* 1ntz_B* 1nu1_B* 1l0l_B* 1ppj_B* 1sqq_B* 1sqv_B* 1sqx_B* 2a06_B* 2fyu_B* 2ybb_B* 1sqb_B* 1sqp_B* 1qcr_B* 2bcc_B* 3bcc_B* ... | Back alignment and structure |
|---|
| >2fge_A Atprep2;, zinc metalloprotease (insulinase family); peptidasome, protease-peptide complex, hydrolase, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 | Back alignment and structure |
|---|
| >3cx5_A Cytochrome B-C1 complex subunit 1, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1p84_A* 2ibz_A* 1kb9_A* 3cxh_A* 1ezv_A* 1kyo_A* | Back alignment and structure |
|---|
| >3cx5_B Cytochrome B-C1 complex subunit 2, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1kb9_B* 1kyo_B* 1p84_B* 2ibz_B* 1ezv_B* 3cxh_B* | Back alignment and structure |
|---|
| >3d3y_A Uncharacterized protein; APC29635, conserved protein, enterococcus faecalis V583, STR genomics, PSI-2, protein structure initiative; 1.95A {Enterococcus faecalis} | Back alignment and structure |
|---|
| >3ih6_A Putative zinc protease; bordetella pertussis tohama I, struc genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 2.15A {Bordetella pertussis} PDB: 3ivl_A | Back alignment and structure |
|---|
| >3ih6_A Putative zinc protease; bordetella pertussis tohama I, struc genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 2.15A {Bordetella pertussis} PDB: 3ivl_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 756 | ||||
| d2fgea1 | 258 | d.185.1.1 (A:540-797) Presequence protease 1, PREP | 1e-77 | |
| d2fgea4 | 257 | d.185.1.1 (A:15-271) Presequence protease 1, PREP1 | 9e-49 | |
| d2fgea3 | 268 | d.185.1.1 (A:272-539) Presequence protease 1, PREP | 4e-45 | |
| d2fgea2 | 196 | d.185.1.1 (A:798-993) Presequence protease 1, PREP | 3e-41 | |
| d1ppja1 | 232 | d.185.1.1 (A:2-233) Cytochrome bc1 core subunit 1 | 4e-11 | |
| d3cx5a1 | 213 | d.185.1.1 (A:27-239) Cytochrome bc1 core subunit 1 | 4e-09 | |
| d1hr6b1 | 222 | d.185.1.1 (B:24-245) Mitochondrial processing pept | 4e-09 | |
| d1ppjb1 | 219 | d.185.1.1 (B:17-235) Cytochrome bc1 core subunit 2 | 3e-08 | |
| d1hr6a1 | 220 | d.185.1.1 (A:14-233) Mitochondrial processing pept | 5e-08 | |
| d3cx5b1 | 202 | d.185.1.1 (B:17-218) Cytochrome bc1 core subunit 2 | 4e-07 | |
| d1q2la4 | 240 | d.185.1.1 (A:24-263) Protease III {Escherichia col | 1e-06 | |
| d1q2la1 | 229 | d.185.1.1 (A:504-732) Protease III {Escherichia co | 2e-05 |
| >d2fgea1 d.185.1.1 (A:540-797) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: LuxS/MPP-like metallohydrolase superfamily: LuxS/MPP-like metallohydrolase family: MPP-like domain: Presequence protease 1, PREP1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 248 bits (634), Expect = 1e-77
Identities = 197/255 (77%), Positives = 225/255 (88%)
Query: 347 LSLRDIPKEPIRVPTEVGDINGVKVLQHDLFTNDVLYTEVVFDMSSLKQELLPLIPLFCQ 406
L+L DIPKEP VPTEVGDINGVKVL+HDLFTND++YTEVVFD+ SLK ELLPL+PLFCQ
Sbjct: 1 LNLGDIPKEPTYVPTEVGDINGVKVLRHDLFTNDIIYTEVVFDIGSLKHELLPLVPLFCQ 60
Query: 407 SLKEMGTKDLSFVQLDQLIGRKTGGISVYPFTSSIHGKEDPCCCMVVRGKAMAGQAEDLF 466
SL EMGTKDL+FVQL+QLIGRKTGGISVYP TSS+ GK++PC ++VRGK+MAG+A+DLF
Sbjct: 61 SLLEMGTKDLTFVQLNQLIGRKTGGISVYPLTSSVRGKDEPCSKIIVRGKSMAGRADDLF 120
Query: 467 NLFNCVLQEVQLTDQQRFKQFVSQSKARMENRLRGSGHGIAAARMDAKLNTAGWISEQMG 526
NL NC+LQEVQ TDQQRFKQFVSQS+ARMENRLRGSGHGIAAARMDA LN AGW+SEQMG
Sbjct: 121 NLMNCLLQEVQFTDQQRFKQFVSQSRARMENRLRGSGHGIAAARMDAMLNIAGWMSEQMG 180
Query: 527 GVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREGCLINMTADGKNLKNSERFVGKF 586
G+SYLEFL LE+KVD+DW GISSSLEEIRRS L+R GC++NMTADGK+L N E+ V KF
Sbjct: 181 GLSYLEFLHTLEKKVDEDWEGISSSLEEIRRSLLARNGCIVNMTADGKSLTNVEKSVAKF 240
Query: 587 LDMLPTNSPVERVKW 601
LD+LP N V W
Sbjct: 241 LDLLPENPSGGLVTW 255
|
| >d2fgea4 d.185.1.1 (A:15-271) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 257 | Back information, alignment and structure |
|---|
| >d2fgea3 d.185.1.1 (A:272-539) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 268 | Back information, alignment and structure |
|---|
| >d2fgea2 d.185.1.1 (A:798-993) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 196 | Back information, alignment and structure |
|---|
| >d1ppja1 d.185.1.1 (A:2-233) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} Length = 232 | Back information, alignment and structure |
|---|
| >d3cx5a1 d.185.1.1 (A:27-239) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 213 | Back information, alignment and structure |
|---|
| >d1hr6b1 d.185.1.1 (B:24-245) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 222 | Back information, alignment and structure |
|---|
| >d1ppjb1 d.185.1.1 (B:17-235) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 219 | Back information, alignment and structure |
|---|
| >d1hr6a1 d.185.1.1 (A:14-233) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 220 | Back information, alignment and structure |
|---|
| >d3cx5b1 d.185.1.1 (B:17-218) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 202 | Back information, alignment and structure |
|---|
| >d1q2la4 d.185.1.1 (A:24-263) Protease III {Escherichia coli [TaxId: 562]} Length = 240 | Back information, alignment and structure |
|---|
| >d1q2la1 d.185.1.1 (A:504-732) Protease III {Escherichia coli [TaxId: 562]} Length = 229 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 756 | |||
| d2fgea4 | 257 | Presequence protease 1, PREP1 {Thale cress (Arabid | 100.0 | |
| d2fgea1 | 258 | Presequence protease 1, PREP1 {Thale cress (Arabid | 100.0 | |
| d1hr6a1 | 220 | Mitochondrial processing peptidase (MPP) alpha cha | 99.96 | |
| d1ppjb1 | 219 | Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [T | 99.96 | |
| d1ppja1 | 232 | Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [T | 99.95 | |
| d3cx5a1 | 213 | Cytochrome bc1 core subunit 1 {Baker's yeast (Sacc | 99.95 | |
| d1q2la4 | 240 | Protease III {Escherichia coli [TaxId: 562]} | 99.95 | |
| d1hr6b1 | 222 | Mitochondrial processing peptidase (MPP) beta chai | 99.95 | |
| d3cx5b1 | 202 | Cytochrome bc1 core subunit 2 {Baker's yeast (Sacc | 99.94 | |
| d2fgea2 | 196 | Presequence protease 1, PREP1 {Thale cress (Arabid | 99.93 | |
| d1hr6b1 | 222 | Mitochondrial processing peptidase (MPP) beta chai | 99.87 | |
| d1q2la4 | 240 | Protease III {Escherichia coli [TaxId: 562]} | 99.86 | |
| d1ppja1 | 232 | Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [T | 99.86 | |
| d1hr6a1 | 220 | Mitochondrial processing peptidase (MPP) alpha cha | 99.86 | |
| d3cx5a1 | 213 | Cytochrome bc1 core subunit 1 {Baker's yeast (Sacc | 99.82 | |
| d1ppjb1 | 219 | Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [T | 99.82 | |
| d3cx5b1 | 202 | Cytochrome bc1 core subunit 2 {Baker's yeast (Sacc | 99.78 | |
| d1ppjb2 | 204 | Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [T | 99.67 | |
| d1hr6b2 | 217 | Mitochondrial processing peptidase (MPP) beta chai | 99.65 | |
| d2fgea4 | 257 | Presequence protease 1, PREP1 {Thale cress (Arabid | 99.6 | |
| d2fgea3 | 268 | Presequence protease 1, PREP1 {Thale cress (Arabid | 99.58 | |
| d1hr6a2 | 237 | Mitochondrial processing peptidase (MPP) alpha cha | 99.57 | |
| d1q2la1 | 229 | Protease III {Escherichia coli [TaxId: 562]} | 99.51 | |
| d1ppja2 | 209 | Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [T | 99.46 | |
| d1q2la1 | 229 | Protease III {Escherichia coli [TaxId: 562]} | 99.43 | |
| d3cx5a2 | 218 | Cytochrome bc1 core subunit 1 {Baker's yeast (Sacc | 99.36 | |
| d1q2la2 | 228 | Protease III {Escherichia coli [TaxId: 562]} | 98.46 | |
| d1ppjb2 | 204 | Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [T | 97.55 | |
| d1hr6b2 | 217 | Mitochondrial processing peptidase (MPP) beta chai | 97.37 | |
| d1ppja2 | 209 | Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [T | 97.32 | |
| d1hr6a2 | 237 | Mitochondrial processing peptidase (MPP) alpha cha | 97.14 | |
| d3cx5a2 | 218 | Cytochrome bc1 core subunit 1 {Baker's yeast (Sacc | 96.63 | |
| d3cx5b2 | 150 | Cytochrome bc1 core subunit 2 {Baker's yeast (Sacc | 96.12 | |
| d2fgea3 | 268 | Presequence protease 1, PREP1 {Thale cress (Arabid | 95.55 | |
| d2fgea2 | 196 | Presequence protease 1, PREP1 {Thale cress (Arabid | 92.6 | |
| d2fgea1 | 258 | Presequence protease 1, PREP1 {Thale cress (Arabid | 91.12 | |
| d1q2la3 | 240 | Protease III {Escherichia coli [TaxId: 562]} | 90.18 | |
| d1q2la2 | 228 | Protease III {Escherichia coli [TaxId: 562]} | 87.02 |
| >d2fgea4 d.185.1.1 (A:15-271) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a+b) fold: LuxS/MPP-like metallohydrolase superfamily: LuxS/MPP-like metallohydrolase family: MPP-like domain: Presequence protease 1, PREP1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=5.4e-42 Score=343.18 Aligned_cols=212 Identities=85% Similarity=1.437 Sum_probs=201.9
Q ss_pred CceeccCCCcEEEEEecCCCCCCCChhHHHHHhcccCCCCCCCCcHHHHHHhcccCcccceeecCCceEEEeccCCHHhH
Q 004392 1 MSVSNDDENKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTKDF 80 (756)
Q Consensus 1 ~~~~~~~~~~~~~~g~~~e~~~~~G~ah~lehl~~~gs~~~~~~~~~~~~l~~~~g~~~na~t~~d~t~y~~~~~~~~~~ 80 (756)
+|+.++|++++|.+|++++|.+++|+|||||||+|+||++||..+.+.+++++.+|+++||+|+.|+|+|++.+.+++++
T Consensus 36 ~~i~~~~~~~~f~i~~~t~p~~~~G~aH~LEHm~f~GS~k~p~~~~~~~~~~~~~g~~~NA~T~~d~T~Y~~~~~~~~~~ 115 (257)
T d2fgea4 36 MSVSNEDENKVFGVVFRTPPKDSTGIPHILQHSVLCGSRKYPVKEPFVELLKGSLHTFLNAFTYPDRTCYPVASTNTKDF 115 (257)
T ss_dssp EEEECSCSSEEEEEEEECCCSSSSCHHHHHHHHTTSCBTTBCSSCHHHHHHHHCCEEEECCEECSSEEEEEEEESSHHHH
T ss_pred EEEecCCCccEEEEEeCCCCCCCcChhHHHHHHhcCCCCCCCCCcHHHHHHHHhcCCcccccchhhHHHHHhhhhhhhhH
Confidence 47899999999999999999999999999999999999999999999999988999999999999999999988899999
Q ss_pred HHHHHHHHhhhhCCCCcccccccccccceeccCCCCCCccchhHHHHHhhhhcCChHHHHHHHHHHHhCCCCCCCCCCCC
Q 004392 81 YNLVDVYFDAVFFPKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGG 160 (756)
Q Consensus 81 ~~~l~~~~d~~~~p~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~v~~e~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~G 160 (756)
.+++++++|++++|.+.+++..|.+++|+.++.+++...+||++|++||++..++|..++.+.+.+.+|++|||+++++|
T Consensus 116 ~~~l~v~ld~v~~P~~~~~~~~~~~e~~~~~~~~~~~~~~ek~vV~~E~~~~~~~p~~~~~~~~~~~lf~~~py~~~~~G 195 (257)
T d2fgea4 116 YNLVDVYLDAVFFPKCVDDAHTFQQEGWHYELNDPSEDISYKGVVFNEMKGVYSQPDNILGRIAQQALSPENTYGVDSGG 195 (257)
T ss_dssp HHHHHHHHHHHHSBGGGTSSHHHHHHTCEEECSCTTSCCEEECHHHHHHHHHTTSHHHHHHHHHHHHHCTTSGGGSCTTC
T ss_pred HHhHHHHHHHHhCcchHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHhcCcHHHHHHHHHhhhcccccccCCCccc
Confidence 99999999999999999998889999999999888888999999999999999999999999999999999999999999
Q ss_pred CcCccCCCCHHHHHHHHHhhcCCCCcEEEEEeCCCHHHHHHHhhhcccccccc
Q 004392 161 DPKVIPKLTFEEFKEFHRKYYHPSNARIWFYGDDDPNERLRILSEASMNTIEF 213 (756)
Q Consensus 161 ~~~~i~~lt~~~l~~f~~~~y~p~n~~l~v~Gd~~~~~~~~~i~~~~~~~~~~ 213 (756)
++++|+++|+++|++||++||+|+||+|+++||+|+++++++|+ ..|+.++.
T Consensus 196 ~~e~I~~it~~~l~~f~~~~Y~p~N~~l~v~G~i~~~~~~~~i~-k~f~~~~~ 247 (257)
T d2fgea4 196 DPKDIPNLTFEEFKEFHRQYYHPSNARIWFYGDDDPVHRLRVLS-EYLDMFEA 247 (257)
T ss_dssp CTTTGGGCCHHHHHHHHHHHSSGGGEEEEEEESSCHHHHHHHHH-HHHTTCCC
T ss_pred hhhhhhhhhHHHHHHHHHHhCCcccEEEEEEeCCCHHHHHHHHH-HHHhcCCC
Confidence 99999999999999999999999999999999999999999997 56665543
|
| >d2fgea1 d.185.1.1 (A:540-797) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
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| >d1hr6a1 d.185.1.1 (A:14-233) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1ppjb1 d.185.1.1 (B:17-235) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
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| >d1ppja1 d.185.1.1 (A:2-233) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
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| >d3cx5a1 d.185.1.1 (A:27-239) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1q2la4 d.185.1.1 (A:24-263) Protease III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1hr6b1 d.185.1.1 (B:24-245) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d3cx5b1 d.185.1.1 (B:17-218) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d2fgea2 d.185.1.1 (A:798-993) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
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| >d1hr6b1 d.185.1.1 (B:24-245) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1q2la4 d.185.1.1 (A:24-263) Protease III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1ppja1 d.185.1.1 (A:2-233) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
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| >d1hr6a1 d.185.1.1 (A:14-233) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d3cx5a1 d.185.1.1 (A:27-239) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1ppjb1 d.185.1.1 (B:17-235) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
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| >d3cx5b1 d.185.1.1 (B:17-218) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1ppjb2 d.185.1.1 (B:236-439) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
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| >d1hr6b2 d.185.1.1 (B:246-462) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d2fgea4 d.185.1.1 (A:15-271) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
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| >d2fgea3 d.185.1.1 (A:272-539) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
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| >d1hr6a2 d.185.1.1 (A:234-470) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1q2la1 d.185.1.1 (A:504-732) Protease III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1ppja2 d.185.1.1 (A:234-442) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
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| >d1q2la1 d.185.1.1 (A:504-732) Protease III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d3cx5a2 d.185.1.1 (A:240-457) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1q2la2 d.185.1.1 (A:733-960) Protease III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1ppjb2 d.185.1.1 (B:236-439) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
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| >d1hr6b2 d.185.1.1 (B:246-462) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1ppja2 d.185.1.1 (A:234-442) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
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| >d1hr6a2 d.185.1.1 (A:234-470) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d3cx5a2 d.185.1.1 (A:240-457) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d3cx5b2 d.185.1.1 (B:219-368) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d2fgea3 d.185.1.1 (A:272-539) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
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| >d2fgea2 d.185.1.1 (A:798-993) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
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| >d2fgea1 d.185.1.1 (A:540-797) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
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| >d1q2la3 d.185.1.1 (A:264-503) Protease III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1q2la2 d.185.1.1 (A:733-960) Protease III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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